TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3696743.2.1
(977 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA030113.1|CA030113 HX06C02r HX Hordeum vulgare subsp. v... 396 e-122
gb|BG415995.2|BG415995 HVSMEk0009F13f Hordeum vulgare testa... 321 2e-098
gb|BE215344.1|BE215344 HV_CEb0006I15f Hordeum vulgare seedl... 332 1e-090
gb|BM100617.2|BM100617 EBma01_SQ005_L23_R maternal, 4 DPA, ... 206 6e-089
gb|CB874722.1|CB874722 HX06C02w HX Hordeum vulgare subsp. v... 282 6e-089
gb|BJ473415.1|BJ473415 BJ473415 K. Sato unpublished cDNA li... 273 3e-086
gb|AV916245.1|AV916245 AV916245 K. Sato unpublished cDNA li... 234 9e-086
gb|CB874756.1|CB874756 HX06D16w HX Hordeum vulgare subsp. v... 271 5e-083
gb|BU971142.1|BU971142 HB16L19r BC Hordeum vulgare subsp. v... 166 4e-077
gb|BJ451080.1|BJ451080 BJ451080 K. Sato unpublished cDNA li... 278 4e-074
gb|BJ468650.1|BJ468650 BJ468650 K. Sato unpublished cDNA li... 229 5e-073
gb|BU996805.1|BU996805 HM14N04r HM Hordeum vulgare subsp. v... 201 3e-063
gb|AV921670.1|AV921670 AV921670 K. Sato unpublished cDNA li... 159 4e-063
gb|BF265852.2|BF265852 HV_CEa0013I03f Hordeum vulgare seedl... 221 4e-060
gb|CB875233.1|CB875233 HX07K22w HX Hordeum vulgare subsp. v... 195 4e-060
gb|BE196054.2|BE196054 HVSMEh0091D21f Hordeum vulgare 5-45 ... 230 1e-059
gb|BJ457634.1|BJ457634 BJ457634 K. Sato unpublished cDNA li... 184 7e-049
gb|BU973725.1|BU973725 HB25M17r BC Hordeum vulgare subsp. v... 183 1e-045
gb|CA028206.1|CA028206 HZ61F01r HZ Hordeum vulgare subsp. v... 133 2e-044
gb|BJ458585.1|BJ458585 BJ458585 K. Sato unpublished cDNA li... 155 9e-042
gb|BJ450210.1|BJ450210 BJ450210 K. Sato unpublished cDNA li... 155 1e-041
gb|BG417425.2|BG417425 HVSMEk0017E11f Hordeum vulgare testa... 168 4e-041
gb|CK122310.1|CK122310 BES1824102n07 BES1824 Hordeum vulgar... 119 2e-040
emb|AJ234606.1|HVU234606 Hordeum vulgare genomic DNA fragme... 93 6e-036
gb|BG415324.2|BG415324 HVSMEk0006A22f Hordeum vulgare testa... 146 2e-034
gb|BQ462861.1|BQ462861 HI02D22r HI Hordeum vulgare subsp. v... 128 2e-034
gb|BQ663666.1|BQ663666 HU03I11u HU Hordeum vulgare subsp. v... 79 1e-033
emb|AJ234870.1|HVU234870 Hordeum vulgare genomic DNA fragme... 87 5e-033
gb|BE195976.3|BE195976 HVSMEh0091A07f Hordeum vulgare 5-45 ... 133 2e-030
gb|BU969384.1|BU969384 HB11G01r BC Hordeum vulgare subsp. v... 133 2e-030
gb|BU975642.1|BU975642 HB31N05r BC Hordeum vulgare subsp. v... 133 2e-030
gb|BU985772.1|BU985772 HF08J07r HF Hordeum vulgare subsp. v... 133 2e-030
gb|CA031166.1|CA031166 HX09D06r HX Hordeum vulgare subsp. v... 133 2e-030
gb|CB876456.1|CB876456 HX11F07w HX Hordeum vulgare subsp. v... 133 2e-030
gb|AV918127.1|AV918127 AV918127 K. Sato unpublished cDNA li... 132 4e-030
gb|AV918379.1|AV918379 AV918379 K. Sato unpublished cDNA li... 132 4e-030
gb|BU971417.1|BU971417 HB17I20r BC Hordeum vulgare subsp. v... 132 4e-030
gb|CB874380.1|CB874380 HX05B15w HX Hordeum vulgare subsp. v... 132 4e-030
gb|CB875735.1|CB875735 HX09D06w HX Hordeum vulgare subsp. v... 132 4e-030
gb|CB875995.1|CB875995 HX09P10w HX Hordeum vulgare subsp. v... 132 4e-030
gb|BU974279.1|BU974279 HB27H05r BC Hordeum vulgare subsp. v... 131 5e-030
gb|BF629097.2|BF629097 HVSMEb0009N21f Hordeum vulgare seedl... 131 7e-030
gb|CB859263.1|CB859263 HI09O13w HI Hordeum vulgare subsp. v... 130 1e-029
gb|AV918025.1|AV918025 AV918025 K. Sato unpublished cDNA li... 129 3e-029
gb|CB876294.1|CB876294 HX10N18w HX Hordeum vulgare subsp. v... 129 3e-029
gb|BU975928.1|BU975928 HB32L19r BC Hordeum vulgare subsp. v... 120 2e-026
gb|CA030641.1|CA030641 HX07K22r HX Hordeum vulgare subsp. v... 114 7e-025
gb|BU969648.1|BU969648 HB12C12r BC Hordeum vulgare subsp. v... 114 9e-025
gb|BG343570.1|BG343570 HVSMEg0006G18f Hordeum vulgare pre-a... 61 4e-022
gb|BQ472674.1|BQ472674 HB01M23r BC Hordeum vulgare subsp. v... 102 3e-021
gb|BG417650.1|BG417650 HVSMEk0019A03f Hordeum vulgare testa... 101 5e-021
>gb|CA030113.1|CA030113 HX06C02r HX Hordeum vulgare subsp. vulgare cDNA clone HX06C02
5-PRIME, mRNA sequence
Length = 624
Score = 396 bits (858), Expect(2) = e-122
Identities = 159/166 (95%), Positives = 161/166 (96%)
Frame = -2 / +3
Query: 877 RDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAAD 698
RDGVSEGQFYQVLL+ELDAIRKACASLE +YQPPVTFVVVQKRHHTRLF NNHNDQR D
Sbjct: 12 RDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVD 191
Query: 697 RSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNN 518
RSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTAD LQTLTNN
Sbjct: 192 RSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNN 371
Query: 517 LCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 380
LCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA
Sbjct: 372 LCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 509
Score = 277 bits (600), Expect(2) = 1e-083
Identities = 113/168 (67%), Positives = 125/168 (74%)
Frame = +1 / -1
Query: 382 HRSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICS 561
HRSP+ RC APC+TE GRLPD HSMQEE+ I S C HTC+T C *EFATHQ *ICS
Sbjct: 507 HRSPRTRCRRCPAPCRTEPGRLPDGHSMQEEQSIQSGCIEHTCSTGCL*EFATHQQ*ICS 328
Query: 562 HPTEHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHCDY*QTTW 741
P EHD+GQ GLFPECQHG T RN+ DG+S + +C AVC FYRQ+ADHCD *Q
Sbjct: 327 RPREHDSGQAGLFPECQHGYTSRNRILSDGRSSNQQRCQAVCSRFYRQYADHCDC*QKA* 148
Query: 742 CDDASGPRQK*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HHPCRI 885
C DASG QK*LEA N P MHRP *WHQV+TTELGRTVP *HHPC +
Sbjct: 147 CGDASGQPQK*LEADNLAPRMHRPS*WHQVQTTELGRTVPR*HHPCLV 4
Score = 270 bits (583), Expect = 1e-071
Identities = 121/182 (66%), Positives = 135/182 (74%)
Frame = -1 / +2
Query: 878 QGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPEASSHQVVC**SQ*SACCR 699
QGWCQ GTVLPSSVV T*CH*+GLCI+G L ASSYFC PEAS H C* SQ*SA CR
Sbjct: 11 QGWCQRGTVLPSSVV*T*CH*EGLCILGAKLSASSYFCGCPEASPH*AFC*QSQ*SAYCR 190
Query: 698 *KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQ 519
*K +HTA H +DLPS+R+ FL V PCWHSGNKP+CPLSCS+G EQIY * VANSH+Q
Sbjct: 191 *KREHTAWHRC*FEDLPSDRIRFLLV*PCWHSGNKPACPLSCSLGREQIYC**VANSHKQ 370
Query: 518 LVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGARYK*QRICGERCYDKPWPSTRGAQHQ 339
VLHVC +H L I+ SSCILC SGSLP SVLHGA + QR+ GERC + QHQ
Sbjct: 371 PVLHVCSMHPLCIDCSSCILCPSGSLPGSVLHGAGHLRQRVRGERCTWRSSTGRSTQQHQ 550
Query: 338 GW 333
W
Sbjct: 551 VW 556
Score = 253 bits (546), Expect(2) = 2e-069
Identities = 115/165 (69%), Positives = 132/165 (80%)
Frame = +2 / -2
Query: 383 TARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVL 562
TARH AV + LHV+PS EGCQM IVCRRN+ Y A A IRV QVV ESLQ IS KFVL
Sbjct: 506 TARHGPAVGGVRLHVEPSPEGCQMGIVCRRNNRYRAGASSIRVAQVVCESLQLISSKFVL 327
Query: 563 IPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIVIINKQPG 742
+P+NMI+GR ACSLNASMA QVEI+ MA+L +++ ARQYV SI STLIIVI++K+P
Sbjct: 326 VPENMIVGRPACSLNASMATQVEIEFCRMADLRINNGARQYVPASIDSTLIIVIVSKKPS 147
Query: 743 VMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIP 877
V+TLLD+ KSNWRL+I LQ CTGL NGIKF QQNLVELSL DTIP
Sbjct: 146 VVTLLDNHKSNWRLIIWLQGCTGLPNGIKFKQQNLVELSLADTIP 12
Score = 249 bits (538), Expect(2) = 1e-069
Identities = 115/168 (68%), Positives = 121/168 (72%)
Frame = -3 / +1
Query: 885 YSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSWSRSVITPGCLLIITMISV 706
+ GMVS RDSSTKFCC NLMPL RPVH WS I SLQLLL SRSV T G LL ITMISV
Sbjct: 4 HEAGMVSARDSSTKFCCLNLMPLGRPVHPWSQIISLQLLLWLSRSVTTLGFLLTITMISV 183
Query: 705 LPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLMGCKLS 526
L IE TYC A +R AI+ + ISTC AMLAFREQA LP IMF G RTNL LM CKLS
Sbjct: 184 LSIEAGTYCLAPLLIRRSAIRQNSISTCVAMLAFREQAGLPTIMFSGTRTNLLLMSCKLS 363
Query: 525 PTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLWRAV 382
TTC TRM A A Y+ FLLHTM IWQPS LG TWS+ TA WRAV
Sbjct: 364 QTTCATRMLDAPALYRLFLLHTMPIWQPSGLGSTWSRTPPTAGPWRAV 507
Score = 187 bits (402), Expect(3) = 1e-072
Identities = 83/102 (81%), Positives = 85/102 (83%)
Frame = +3 / -3
Query: 381 APLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLF 560
APLATDPLS VSGSM*N GGTIDTERVH AYV*H+L VRVCN SAVNLF
Sbjct: 508 APLATDPLSEVSGSM*NRARKAARWA*YAGGTIDTERVHRAYV*HRLFVRVCNSSAVNLF 329
Query: 561 SSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
SS RT**WAGRLVP*MPAWLH+*KSNSVGWQIFESTTVPGSM
Sbjct: 328 SSQRT**WAGRLVP*MPAWLHK*KSNSVGWQIFESTTVPGSM 203
Score = 89.0 bits (188), Expect(3) = 1e-072
Identities = 39/44 (88%), Positives = 39/44 (88%)
Frame = +3 / -3
Query: 747 *RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL 878
*RFWTTTKVTGG * S DAQAFLMASSS NRTW*NCPSLTPSL
Sbjct: 142 *RFWTTTKVTGG**FGSKDAQAFLMASSSNNRTW*NCPSLTPSL 11
Score = 62.5 bits (130), Expect(2) = e-122
Identities = 26/36 (72%), Positives = 27/36 (75%)
Frame = -2 / +3
Query: 367 GPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
GPP G + NVAVRPLPALKENVKRVMFYC*
Sbjct: 516 GPPQGGPRSSTRFGNVAVRPLPALKENVKRVMFYC* 623
Score = 52.8 bits (109), Expect(2) = 1e-083
Identities = 25/36 (69%), Positives = 26/36 (72%)
Frame = +3 / -3
Query: 261 *Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGP 368
*Q*NMTR TFSLRAG GLTATF L+ P GGP
Sbjct: 622 *Q*NMTRLTFSLRAGRGLTATFPNLVLLRGPPCGGP 515
Score = 36.8 bits (74), Expect(3) = 1e-072
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2 / -2
Query: 266 VEHDALHVFLEGR*WPHSNICSTSPGVARPWWRATAC 376
V+HDAL VFLEG P SN+ WR C
Sbjct: 617 VKHDALDVFLEGGERPDSNVPKPGAAAWTALWRTATC 507
Score = 35.0 bits (70), Expect(2) = 1e-069
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1 / +2
Query: 362 STRGAQHQGWCCKCCCEAITCPQGKREARHV 270
ST + Q + CC+A PQGKR+ARHV
Sbjct: 521 STGRSTQQHQVWERCCQASPRPQGKRQARHV 613
Score = 30.4 bits (60), Expect(2) = 2e-069
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +1 / -1
Query: 259 LSSRT*RASRFP*GQVMASQQHLQHQPWCCAPLVE 363
LSS+T*RA RFP*G+ A QQ Q C VE
Sbjct: 624 LSSKT*RA*RFP*GRGEA*QQRSQTWCCCVDRPVE 520
>gb|BG415995.2|BG415995 HVSMEk0009F13f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0009F13f, mRNA sequence
Length = 970
Score = 321 bits (695), Expect(2) = 2e-098
Identities = 128/132 (96%), Positives = 128/132 (96%)
Frame = -2 / +1
Query: 775 VTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGT 596
VTFVVVQKRHHTRLF NNHNDQR DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGT
Sbjct: 1 VTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGT 180
Query: 595 SRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP 416
SRPAHYHVLWDENKFTAD LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP
Sbjct: 181 SRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP 360
Query: 415 DTSDSGSVASGA 380
DTSDSGSVASGA
Sbjct: 361 DTSDSGSVASGA 396
Score = 206 bits (445), Expect(2) = 1e-061
Identities = 85/131 (64%), Positives = 95/131 (72%)
Frame = +1 / -1
Query: 382 HRSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICS 561
HRSP+ RC APC+TE GRLPD HSMQEE+ I S C HTC+T C *EFATHQ *ICS
Sbjct: 394 HRSPRTRCRRCPAPCRTEPGRLPDGHSMQEEQSIQSGCIEHTCSTGCL*EFATHQQ*ICS 215
Query: 562 HPTEHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHCDY*QTTW 741
P EHD+GQ GLFPECQHG T RN+ DG+S + +C AVC FYRQ+ADHCD *Q
Sbjct: 214 RPREHDSGQAGLFPECQHGYTSRNRILSDGRSSNQQRCQAVCSRFYRQYADHCDC*QKA* 35
Query: 742 CDDASGPRQK* 774
C DASG QK*
Sbjct: 34 CGDASGQPQK* 2
Score = 203 bits (438), Expect(2) = 7e-056
Identities = 92/145 (63%), Positives = 104/145 (71%)
Frame = -1 / +3
Query: 773 YFCRGPEASSHQVVC**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNK 594
YFC PEAS H C* SQ*SA CR*K +HTA H +DLPS+R+ FL V PCWHSGNK
Sbjct: 3 YFCGCPEASPH*AFC*QSQ*SAYCR*KREHTAWHRC*FEDLPSDRIRFLLV*PCWHSGNK 182
Query: 593 PSCPLSCSVG*EQIYG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGAR 414
P+CPLSCS+G EQIY * VANSH+Q VLHVC +H L I+ SSCILC SGSLP SVLHGA
Sbjct: 183 PACPLSCSLGREQIYC**VANSHKQPVLHVCSMHPLCIDCSSCILCPSGSLPGSVLHGAG 362
Query: 413 YK*QRICGERCYDKPWPSTRGAQHQ 339
+ QR+ GERC + QHQ
Sbjct: 363 HLRQRVRGERCTWRSSTGRSTQQHQ 437
Score = 188 bits (406), Expect(2) = 1e-050
Identities = 87/131 (66%), Positives = 103/131 (78%)
Frame = +2 / -2
Query: 383 TARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVL 562
TARH AV + LHV+PS EGCQM IVCRRN+ Y A A IRV QVV ESLQ IS KFVL
Sbjct: 393 TARHGPAVGGVRLHVEPSPEGCQMGIVCRRNNRYRAGASSIRVAQVVCESLQLISSKFVL 214
Query: 563 IPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIVIINKQPG 742
+P+NMI+GR ACSLNASMA QVEI+ MA+L +++ ARQYV SI STLIIVI++K+P
Sbjct: 213 VPENMIVGRPACSLNASMATQVEIEFCRMADLRINNGARQYVPASIDSTLIIVIVSKKPS 34
Query: 743 VMTLLDHDKSN 775
V+TLLD+ KSN
Sbjct: 33 VVTLLDNHKSN 1
Score = 187 bits (402), Expect(3) = 5e-052
Identities = 83/102 (81%), Positives = 85/102 (83%)
Frame = +3 / -3
Query: 381 APLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLF 560
APLATDPLS VSGSM*N GGTIDTERVH AYV*H+L VRVCN SAVNLF
Sbjct: 395 APLATDPLSEVSGSM*NRARKAARWA*YAGGTIDTERVHRAYV*HRLFVRVCNSSAVNLF 216
Query: 561 SSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
SS RT**WAGRLVP*MPAWLH+*KSNSVGWQIFESTTVPGSM
Sbjct: 215 SSQRT**WAGRLVP*MPAWLHK*KSNSVGWQIFESTTVPGSM 90
Score = 181 bits (390), Expect(2) = 7e-049
Identities = 87/131 (66%), Positives = 92/131 (70%)
Frame = -3 / +2
Query: 774 LLLSWSRSVITPGCLLIITMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQ 595
LLL SRSV T G LL ITMISVL IE TYC A +R AI+ + ISTC AMLAFREQ
Sbjct: 2 LLLWLSRSVTTLGFLLTITMISVLSIEAGTYCLAPLLIRRSAIRQNSISTCVAMLAFREQ 181
Query: 594 AVLPIIMFCGMRTNLRLMGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQ 415
A LP IMF G RTNL LM CKLS TTC TRM A A Y+ FLLHTM IWQPS LG TWS+
Sbjct: 182 AGLPTIMFSGTRTNLLLMSCKLSQTTCATRMLDAPALYRLFLLHTMPIWQPSGLGSTWSR 361
Query: 414 IQVTADLWRAV 382
TA WRAV
Sbjct: 362 TPPTAGPWRAV 394
Score = 58.8 bits (122), Expect(2) = 2e-098
Identities = 25/28 (89%), Positives = 25/28 (89%)
Frame = -2 / +2
Query: 334 GAANVAVRPLPALKENVKRVMFYC*D*R 251
G NVAVRPLPALKENVKRVMFYC*D R
Sbjct: 437 GFGNVAVRPLPALKENVKRVMFYC*DPR 520
Score = 50.6 bits (104), Expect(2) = 1e-061
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = +3 / -2
Query: 252 RQS*Q*NMTRFTFSLRAGNGLTATFAAP 335
R S*Q*NMTR TFSLRAG GLTATF P
Sbjct: 519 RGS*Q*NMTRLTFSLRAGRGLTATFPKP 436
Score = 34.5 bits (69), Expect(2) = 7e-056
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1 / +1
Query: 320 CCEAITCPQGKREARHV 270
CC+A PQGKR+ARHV
Sbjct: 451 CCQASPRPQGKRQARHV 501
Score = 33.1 bits (66), Expect(2) = 7e-049
Identities = 18/26 (69%), Positives = 18/26 (69%)
Frame = -3 / +3
Query: 333 VLQMLL*GHYLPSRKT*SASCSTAKI 256
VL LL G PSRKT SASC TAKI
Sbjct: 438 VLGTLLSGLSPPSRKTSSASCFTAKI 515
Score = 32.2 bits (64), Expect(3) = 5e-052
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -3
Query: 241 HQRSVNLSSRT*RASRFP*GQVMASQQHLQH 333
H +LSS+T*RA RFP*G+ A QQ Q+
Sbjct: 530 HGNCEDLSSKT*RA*RFP*GRGEA*QQRSQN 438
Score = 31.8 bits (63), Expect(2) = 1e-050
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2 / -1
Query: 266 VEHDALHVFLEGR*WPHSNICST 334
V+HDAL VFLEG P SN+ T
Sbjct: 505 VKHDALDVFLEGGERPDSNVPKT 437
Score = 24.4 bits (47), Expect(3) = 5e-052
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -3
Query: 747 *RFWTTTKV 773
*RFWTTTKV
Sbjct: 29 *RFWTTTKV 3
>gb|BE215344.1|BE215344 HV_CEb0006I15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006I15f, mRNA sequence
Length = 679
Score = 332 bits (720), Expect = 1e-090
Identities = 136/164 (82%), Positives = 144/164 (87%)
Frame = -2 / +2
Query: 973 PKGGLSLVA*LGNLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 794
P+ G + LLISF RATGQKP+RIIFY+DGVSEGQFYQVLLYELDAIRKACASLE
Sbjct: 92 PQRGTVTGGMIKELLISFKRATGQKPQRIIFYKDGVSEGQFYQVLLYELDAIRKACASLE 271
Query: 793 SDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSH 614
+YQPPVTFVVVQKRHHTRLF NNHNDQR DRSGNILPGTVVDSKICHPTEFDFYLC+H
Sbjct: 272 PNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCNH 451
Query: 613 AGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSV 482
AGIQGTSRPA+YHVLWDENKFTAD LQTL LCY YA+ TRSV
Sbjct: 452 AGIQGTSRPANYHVLWDENKFTADELQTLKKKLCYNYAKGTRSV 583
Score = 219 bits (473), Expect = 2e-056
Identities = 95/153 (62%), Positives = 104/153 (67%)
Frame = +1 / -3
Query: 475 RLILSVCTWHTCNTSCW*EFATHQP*ICSHPTEHDNGQDGLFPECQHGCTGRNQTRLDGK 654
+ I S C H+C+T + EFA HQ * C HP DN Q GLFPECQ G T RNQTR DGK
Sbjct: 590 QFIQSGCP*HSCSTIFFLEFAIHQQ*TCFHPIVRDN*QAGLFPECQRGYTSRNQTRSDGK 411
Query: 655 SLSPPQCPAVCCHFYRQHADHCDY*QTTWCDDASGPRQK*LEAGNQTPMMHRPF*WHQVR 834
SL+ QC AVC FY+Q+ DHC Y*Q WCD ASG QK*L AGN P H PF*WHQV
Sbjct: 410 SLNQQQCQAVCFRFYQQYVDHCGY*QKAWCDAASGQLQK*LGAGNWAPRTHMPF*WHQVH 231
Query: 835 TTELGRTVPH*HHPCRI*SSWVFVQSPSRKK*E 933
T EL RT P *HHPC+I* S V V+ PS KK*E
Sbjct: 230 TEELDRTGPR*HHPCKI*FSGVSVRLPS*KK*E 132
Score = 212 bits (458), Expect(2) = 2e-058
Identities = 95/152 (62%), Positives = 115/152 (75%)
Frame = -1 / +1
Query: 932 SHFFLEGDWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPE 753
SHFF EG+ T+T E+HILQGWCQ G VL SS V T*CH*KG+C++G LPA SYFC PE
Sbjct: 133 SHFFQEGNRTETPENHILQGWCQRGPVLSSSSV*T*CH*KGMCVLGAQLPAPSYFCSCPE 312
Query: 752 ASSHQVVC**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSC 573
A+SHQ C** Q*S C *K +HTA HC KDLPS+RV*FL V P WHSGNKP+C LS
Sbjct: 313 AASHQAFC**PQ*STYC**KRKHTAWHCC*FKDLPSDRV*FLLV*PRWHSGNKPAC*LSR 492
Query: 572 SVG*EQIYG*WVANSHQQLVLHVCQVHTLSIN 477
++G*+Q++ * +ANS +++VL +C H L IN
Sbjct: 493 TMG*KQVHC**IANSKKKIVLQLC*GHPLCIN 588
Score = 201 bits (433), Expect = 6e-051
Identities = 98/152 (64%), Positives = 116/152 (76%)
Frame = +2 / -1
Query: 482 Y*ACAPGIRVTQVVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL* 661
Y A A I V Q SLQ IS + V IP +I+ R ACSLNAS+ QVEIKLG MANL*
Sbjct: 583 YRAGALSIVVAQFFF*SLQFISSELVFIP*YVIISRPACSLNASVVTQVEIKLGRMANL* 404
Query: 662 VHHSARQYVATSIGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQ 841
+++SARQYV+ SI STLIIV+I+K+PGVM LLD+ KSNW LVI LQ T LSNGIKF+Q+
Sbjct: 403 INNSARQYVSASINSTLIIVVISKKPGVMPLLDNYKSNWGLVIGLQGRTCLSNGIKFIQK 224
Query: 842 NLVELSLTDTIPVEYDPLGFLSSRPPERNEKV 937
NL+EL+L DTI V+YD LGFLS P ERNEK+
Sbjct: 223 NLIELALADTILVKYDSLGFLSGCPLERNEKL 128
Score = 197 bits (424), Expect = 1e-049
Identities = 97/153 (63%), Positives = 106/153 (69%)
Frame = -3 / +3
Query: 936 TFSFLSGGRLDKNPRGSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSWS 757
+FSFLS G+ D+NPR SY T MVS R SS KF C NLMPLER V WS ITS QLLL S
Sbjct: 129 SFSFLSRGQPDRNPRESYFTRMVSARASSIKFFCMNLMPLERHVRPWSPITSPQLLL*LS 308
Query: 756 RSVITPGCLLIITMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPII 577
RS ITPG LLI TMI+VL IE TYC AL QRFAI+PSLISTC LAFREQA L II
Sbjct: 309 RSGITPGFLLITTMINVLLIEAETYCLALLLIQRFAIRPSLISTCVTTLAFREQAGLLII 488
Query: 576 MFCGMRTNLRLMGCKLSPTTCVTRMPGAHAQYQ 478
+ GM+T+ LM CKL C T M A A Y+
Sbjct: 489 TYYGMKTSSLLMNCKL*KKNCATTMLRAPALYK 587
Score = 128 bits (275), Expect(3) = 8e-060
Identities = 58/70 (82%), Positives = 60/70 (85%)
Frame = +3 / -2
Query: 477 IDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQI 656
I TERV LA +*H RVCN SAVNLFSSH T** AGRLVP*MPAWLH+*KSNSVGWQI
Sbjct: 588 IYTERVPLA*L*HNFFFRVCNSSAVNLFSSHST**LAGRLVP*MPAWLHK*KSNSVGWQI 409
Query: 657 FESTTVPGSM 686
FESTTVPGSM
Sbjct: 408 FESTTVPGSM 379
Score = 117 bits (251), Expect(3) = 8e-060
Identities = 54/64 (84%), Positives = 54/64 (84%)
Frame = +3 / -2
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQ 920
V* RFWTTTKVTGGW* S DA AFLMASSSY RT *N PSLTPSL*NMIL GFCPVAL
Sbjct: 324 V*CRFWTTTKVTGGW*LGSKDAHAFLMASSSYRRT**NWPSLTPSL*NMILWGFCPVALL 145
Query: 921 KEMR 932
KEMR
Sbjct: 144 KEMR 133
Score = 33.6 bits (67), Expect(2) = 2e-058
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -1 / +2
Query: 977 DPQRGTVSGGMIRE 936
DPQRGTV+GGMI+E
Sbjct: 89 DPQRGTVTGGMIKE 130
Score = 23.1 bits (44), Expect(3) = 8e-060
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2 / -3
Query: 941 *SCHQRQSPFGD 976
*SCHQ Q FGD
Sbjct: 125 *SCHQSQFLFGD 90
>gb|BM100617.2|BM100617 EBma01_SQ005_L23_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ005_L23 5', mRNA sequence
Length = 670
Score = 206 bits (444), Expect(2) = 6e-089
Identities = 79/90 (87%), Positives = 84/90 (93%)
Frame = -2 / +3
Query: 709 RAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQT 530
+ D+SGNILPGTVVD+ ICHPTEFDFYLCSHAGIQGTSRP HYHVL+DEN FTADGLQ
Sbjct: 399 KETDKSGNILPGTVVDTNICHPTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQ 578
Query: 529 LTNNLCYTYARCTRSVSIVPPAYYAHLAAF 440
LTNNLCYTYARCTRSVS+VPPAYYAHLAAF
Sbjct: 579 LTNNLCYTYARCTRSVSVVPPAYYAHLAAF 668
Score = 142 bits (304), Expect(2) = 6e-089
Identities = 57/75 (76%), Positives = 65/75 (86%)
Frame = -2 / +3
Query: 934 LLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQ 755
LL+SF++ TG KP RIIFYRDGVSEGQF QVL+YE+DAIRKACASL++DYQP VTFVVVQ
Sbjct: 180 LLVSFYKKTGYKPSRIIFYRDGVSEGQFAQVLMYEMDAIRKACASLQADYQPKVTFVVVQ 359
Query: 754 KRHHTRLFVNNHNDQ 710
KRHHTRLF H +
Sbjct: 360 KRHHTRLFPEVHGKE 404
Score = 120 bits (256), Expect(2) = 3e-048
Identities = 53/73 (72%), Positives = 58/73 (79%)
Frame = +3 / -1
Query: 468 GGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVG 647
GGT +TERVH AYV*H+LLV C+PSAV FSS RT * G LVP*+PAWLHR*KSNSVG
Sbjct: 640 GGTTETERVHRAYV*HRLLVSCCSPSAVKPFSSKRTW**VGLLVP*IPAWLHR*KSNSVG 461
Query: 648 WQIFESTTVPGSM 686
W + STTVPG M
Sbjct: 460 WHMLVSTTVPGRM 422
Score = 92.3 bits (195), Expect(2) = 3e-048
Identities = 43/55 (78%), Positives = 43/55 (78%)
Frame = +3 / -1
Query: 753 FWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVAL 917
FWTTT VT G *S DAQAFLMAS SY RTW NCPSLTPSL*NMILLG PV L
Sbjct: 361 FWTTTNVTLG**SACKDAQAFLMASISYIRTWANCPSLTPSL*NMILLGL*PVFL 197
Score = 88.1 bits (186), Expect(2) = 1e-030
Identities = 38/86 (44%), Positives = 58/86 (67%)
Frame = -1 / +2
Query: 695 KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQL 516
KW+H + + G + +PS+RV*FLPV PC +SG+K + L C + *++ + W A +HQQ
Sbjct: 413 KWKHPSWNRG*HQHMPSHRV*FLPV*PCRYSGHKQTNSLPCPLR*KRFHCRWAAAAHQQP 592
Query: 515 VLHVCQVHTLSINRSSCILCSSGSLP 438
VLH+ +H+L + SSC+L S G +P
Sbjct: 593 VLHIRSMHSLCLCCSSCLLRSPGCVP 670
Score = 87.7 bits (185), Expect(2) = 9e-036
Identities = 42/87 (48%), Positives = 59/87 (67%)
Frame = +2 / -3
Query: 440 EGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVLIPQNMIMGRTACSLNASMA 619
E Q+S+V RRN+ A A + V QVVGE LQPI + V I ++M++ +AC+LN MA
Sbjct: 668 ERSQVSVVGRRNNRDRASASSVCVAQVVGELLQPIGSETVFIEEDMVVSWSACALNTGMA 489
Query: 620 AQVEIKLGWMANL*VHHSARQYVATSI 700
QVEIKLG MA + V+H +R+ V+T +
Sbjct: 488 TQVEIKLGGMAYVGVNHGSRKDVSTFV 408
Score = 83.1 bits (175), Expect(2) = 9e-036
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +2 / -3
Query: 707 TLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIPVEY 886
+L V + ++P VM LD++K ++ L+IRLQ CT L +GI F+ QNL EL T+PVEY
Sbjct: 407 SLFSVHLREEPCVMPFLDNNKCHFGLIIRLQRCTSLPDGIHFIHQNLGELPFAHTVPVEY 228
Query: 887 DPLGFLSS 910
DP GF++S
Sbjct: 227 DPAGFITS 204
Score = 74.8 bits (157), Expect(2) = 8e-029
Identities = 37/86 (43%), Positives = 43/86 (50%)
Frame = +1 / -2
Query: 439 GRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPTEHDNGQDGLFPECQHG 618
G P E S QEE+ S C C+T CW* A H+ * H H + L PE +HG
Sbjct: 669 GTQPGERSRQEEQQRQSECIERMCSTGCW*AAAAHRQ*NRFHRRGHGSELVCLCPEYRHG 490
Query: 619 CTGRNQTRLDGKSLSPPQCPAVCCHF 696
TGRNQTR DG P+ C HF
Sbjct: 489 YTGRNQTRWDGICWCQPRFQEGCFHF 412
Score = 73.0 bits (153), Expect(2) = 1e-021
Identities = 37/74 (50%), Positives = 39/74 (52%)
Frame = -3 / +1
Query: 669 WWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLMGCKLSPTTCVTRMPGAH 490
W T +AI PSLISTC AM FR QA M M+T MGC SPTTC T A
Sbjct: 439 WLTPTYAIPPSLISTCVAMPVFRAQADQLTTMSSSMKTVSLPMGCSSSPTTCATHTLDAL 618
Query: 489 AQYQSFLLHTMLIW 448
A FLL T L W
Sbjct: 619 ALSLLFLLPTTLTW 660
Score = 72.5 bits (152), Expect(2) = 8e-029
Identities = 32/60 (53%), Positives = 36/60 (60%)
Frame = +1 / -2
Query: 742 CDDASGPRQK*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HHPCRI*SSWVFVQSPSR 921
CD SG +Q L A N MH+P *WH T+ELGRT H PCRI*S WV+ QS R
Sbjct: 372 CDAFSGQQQMSLWADNPPAKMHKPS*WHPFHTSELGRTALRSHRPCRI*SCWVYNQSSYR 193
Score = 65.2 bits (136), Expect(2) = 1e-030
Identities = 30/60 (50%), Positives = 36/60 (60%)
Frame = -1 / +2
Query: 911 DWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPEASSHQVV 732
DW TQ+DHILQG C+ V PSS V CH +GLCI L A S C PE +SH+ +
Sbjct: 203 DWL*TQQDHILQGRCERRAVRPSSDV*NGCHQEGLCIFAGGLSAQSDICCCPEKASHKAL 382
Score = 50.1 bits (103), Expect(2) = 1e-021
Identities = 32/75 (42%), Positives = 37/75 (49%)
Frame = -3 / +1
Query: 912 RLDKNPRGSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSWSRSVITPGC 733
RL NP GSYSTG V + SS KF C MP R VH I S + L SR IT G
Sbjct: 202 RLVINPAGSYSTGTV*AKGSSPKF*CMKWMPSGRLVHLCRRIISPK*HLLLSRKGITQGS 381
Query: 732 LLIITMISVLPIEVA 688
L T + +E +
Sbjct: 382 SLRCTEKRLTKVETS 426
>gb|CB874722.1|CB874722 HX06C02w HX Hordeum vulgare subsp. vulgare cDNA clone HX06C02
3-PRIME, mRNA sequence
Length = 645
Score = 282 bits (611), Expect(2) = 6e-089
Identities = 112/115 (97%), Positives = 112/115 (97%)
Frame = -2 / -2
Query: 724 NHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTA 545
NHNDQR DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTA
Sbjct: 644 NHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTA 465
Query: 544 DGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 380
D LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA
Sbjct: 464 DELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 300
Score = 190 bits (410), Expect(2) = 5e-059
Identities = 75/114 (65%), Positives = 85/114 (74%)
Frame = +1 / +2
Query: 382 HRSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICS 561
HRSP+ RC APC+TE GRLPD HSMQEE+ I S C HTC+T C *EFATHQ *ICS
Sbjct: 302 HRSPRTRCRRCPAPCRTEPGRLPDGHSMQEEQSIQSGCIEHTCSTGCL*EFATHQQ*ICS 481
Query: 562 HPTEHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHCD 723
P EHD+GQ GLFPECQHG T RN+ DG+S + +C AVC FYRQ+ADHCD
Sbjct: 482 RPREHDSGQAGLFPECQHGYTSRNRILSDGRSSNQQRCQAVCSRFYRQYADHCD 643
Score = 187 bits (402), Expect(2) = 1e-051
Identities = 83/102 (81%), Positives = 85/102 (83%)
Frame = +3 / +1
Query: 381 APLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLF 560
APLATDPLS VSGSM*N GGTIDTERVH AYV*H+L VRVCN SAVNLF
Sbjct: 301 APLATDPLSEVSGSM*NRARKAARWA*YAGGTIDTERVHRAYV*HRLFVRVCNSSAVNLF 480
Query: 561 SSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
SS RT**WAGRLVP*MPAWLH+*KSNSVGWQIFESTTVPGSM
Sbjct: 481 SSQRT**WAGRLVP*MPAWLHK*KSNSVGWQIFESTTVPGSM 606
Score = 186 bits (401), Expect = 2e-046
Identities = 83/130 (63%), Positives = 95/130 (73%)
Frame = -1 / -1
Query: 722 SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG* 543
SQ*SA CR*K +HTA H +DLPS+R+ FL V PCWHSGNKP+CPLSCS+G EQIY *
Sbjct: 642 SQ*SAYCR*KREHTAWHRC*FEDLPSDRIRFLLV*PCWHSGNKPACPLSCSLGREQIYC* 463
Query: 542 WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGARYK*QRICGERCYDKPWP 363
VANSH+Q VLHVC +H L I+ SSCILC SGSLP SVLHGA + QR+ GERC +
Sbjct: 462 *VANSHKQPVLHVCSMHPLCIDCSSCILCPSGSLPGSVLHGAGHLRQRVRGERCTWRSST 283
Query: 362 STRGAQHQGW 333
QHQ W
Sbjct: 282 GRSTQQHQVW 253
Score = 165 bits (354), Expect(2) = 2e-044
Identities = 76/114 (66%), Positives = 81/114 (71%)
Frame = -3 / -3
Query: 723 ITMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRL 544
ITMISVL IE TYC A +R AI+ + ISTC AMLAFREQA LP IMF G RTNL L
Sbjct: 643 ITMISVLSIEAGTYCLAPLLIRRSAIRQNSISTCVAMLAFREQAGLPTIMFSGTRTNLLL 464
Query: 543 MGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLWRAV 382
M CKLS TTC TRM A A Y+ FLLHTM IWQPS LG TWS+ TA WRAV
Sbjct: 463 MSCKLSQTTCATRMLDAPALYRLFLLHTMPIWQPSGLGSTWSRTPPTAGPWRAV 302
Score = 163 bits (350), Expect(2) = 4e-043
Identities = 77/114 (67%), Positives = 88/114 (77%)
Frame = +2 / +3
Query: 383 TARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVL 562
TARH AV + LHV+PS EGCQM IVCRRN+ Y A A IRV QVV ESLQ IS KFVL
Sbjct: 303 TARHGPAVGGVRLHVEPSPEGCQMGIVCRRNNRYRAGASSIRVAQVVCESLQLISSKFVL 482
Query: 563 IPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIVI 724
+P+NMI+GR ACSLNASMA QVEI+ MA+L +++ ARQYV SI STLIIVI
Sbjct: 483 VPENMIVGRPACSLNASMATQVEIEFCRMADLRINNGARQYVPASIDSTLIIVI 644
Score = 65.7 bits (137), Expect(2) = 6e-089
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -2 / -2
Query: 367 GPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC*D*R 251
GPP G + NVAVRPLPALKENVKRVMFYC*D R
Sbjct: 293 GPPQGGPRSSTRFGNVAVRPLPALKENVKRVMFYC*DPR 177
Score = 57.9 bits (120), Expect(2) = 5e-059
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = +3 / +1
Query: 207 HHHHNDNCLLTASAQRQS*Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGP 368
H + + +T+ R S*Q*NMTR TFSLRAG GLTATF L+ P GGP
Sbjct: 133 HQYDSQVLQVTSR*LRGS*Q*NMTRLTFSLRAGRGLTATFPNLVLLRGPPCGGP 294
Score = 36.8 bits (74), Expect(2) = 1e-051
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2 / +3
Query: 266 VEHDALHVFLEGR*WPHSNICSTSPGVARPWWRATAC 376
V+HDAL VFLEG P SN+ WR C
Sbjct: 192 VKHDALDVFLEGGERPDSNVPKPGAAAWTALWRTATC 302
Score = 35.0 bits (70), Expect(2) = 2e-044
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1 / -1
Query: 362 STRGAQHQGWCCKCCCEAITCPQGKREARHV 270
ST + Q + CC+A PQGKR+ARHV
Sbjct: 288 STGRSTQQHQVWERCCQASPRPQGKRQARHV 196
Score = 32.2 bits (64), Expect(2) = 4e-043
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = +1 / +2
Query: 241 HQRSVNLSSRT*RASRFP*GQVMASQQHLQHQPWCCAPLVE 363
H +LSS+T*RA RFP*G+ A QQ Q C VE
Sbjct: 167 HGNCEDLSSKT*RA*RFP*GRGEA*QQRSQTWCCCVDRPVE 289
>gb|BJ473415.1|BJ473415 BJ473415 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12f16 3', mRNA sequence
Length = 588
Score = 273 bits (591), Expect(2) = 3e-086
Identities = 109/112 (97%), Positives = 109/112 (97%)
Frame = -2 / -3
Query: 715 DQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGL 536
DQR DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTAD L
Sbjct: 586 DQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADEL 407
Query: 535 QTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 380
QTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA
Sbjct: 406 QTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 251
Score = 187 bits (402), Expect(2) = 6e-058
Identities = 83/102 (81%), Positives = 85/102 (83%)
Frame = +3 / +3
Query: 381 APLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLF 560
APLATDPLS VSGSM*N GGTIDTERVH AYV*H+L VRVCN SAVNLF
Sbjct: 252 APLATDPLSEVSGSM*NRARKAARWA*YAGGTIDTERVHRAYV*HRLFVRVCNSSAVNLF 431
Query: 561 SSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
SS RT**WAGRLVP*MPAWLH+*KSNSVGWQIFESTTVPGSM
Sbjct: 432 SSQRT**WAGRLVP*MPAWLHK*KSNSVGWQIFESTTVPGSM 557
Score = 183 bits (395), Expect(2) = 1e-050
Identities = 73/112 (65%), Positives = 83/112 (74%)
Frame = +1 / +1
Query: 382 HRSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICS 561
HRSP+ RC APC+TE GRLPD HSMQEE+ I S C HTC+T C *EFATHQ *ICS
Sbjct: 253 HRSPRTRCRRCPAPCRTEPGRLPDGHSMQEEQSIQSGCIEHTCSTGCL*EFATHQQ*ICS 432
Query: 562 HPTEHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADH 717
P EHD+GQ GLFPECQHG T RN+ DG+S + +C AVC FYRQ+ADH
Sbjct: 433 RPREHDSGQAGLFPECQHGYTSRNRILSDGRSSNQQRCQAVCSRFYRQYADH 588
Score = 182 bits (392), Expect = 3e-045
Identities = 81/128 (63%), Positives = 93/128 (72%)
Frame = -1 / -2
Query: 716 *SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WV 537
*SA CR*K +HTA H +DLPS+R+ FL V PCWHSGNKP+CPLSCS+G EQIY * V
Sbjct: 587 *SAYCR*KREHTAWHRC*FEDLPSDRIRFLLV*PCWHSGNKPACPLSCSLGREQIYC**V 408
Query: 536 ANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGARYK*QRICGERCYDKPWPST 357
ANSH+Q VLHVC +H L I+ SSCILC SGSLP SVLHGA + QR+ GERC +
Sbjct: 407 ANSHKQPVLHVCSMHPLCIDCSSCILCPSGSLPGSVLHGAGHLRQRVRGERCTWRSSTGR 228
Query: 356 RGAQHQGW 333
QHQ W
Sbjct: 227 STQQHQVW 204
Score = 160 bits (345), Expect(2) = 3e-043
Identities = 74/112 (66%), Positives = 79/112 (70%)
Frame = -3 / -1
Query: 717 MISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLMG 538
MISVL IE TYC A +R AI+ + ISTC AMLAFREQA LP IMF G RTNL LM
Sbjct: 588 MISVLSIEAGTYCLAPLLIRRSAIRQNSISTCVAMLAFREQAGLPTIMFSGTRTNLLLMS 409
Query: 537 CKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLWRAV 382
CKLS TTC TRM A A Y+ FLLHTM IWQPS LG TWS+ TA WRAV
Sbjct: 408 CKLSQTTCATRMLDAPALYRLFLLHTMPIWQPSGLGSTWSRTPPTAGPWRAV 253
Score = 157 bits (338), Expect(2) = 2e-041
Identities = 74/111 (66%), Positives = 85/111 (76%)
Frame = +2 / +2
Query: 383 TARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVL 562
TARH AV + LHV+PS EGCQM IVCRRN+ Y A A IRV QVV ESLQ IS KFVL
Sbjct: 254 TARHGPAVGGVRLHVEPSPEGCQMGIVCRRNNRYRAGASSIRVAQVVCESLQLISSKFVL 433
Query: 563 IPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLI 715
+P+NMI+GR ACSLNASMA QVEI+ MA+L +++ ARQYV SI STLI
Sbjct: 434 VPENMIVGRPACSLNASMATQVEIEFCRMADLRINNGARQYVPASIDSTLI 586
Score = 65.7 bits (137), Expect(2) = 3e-086
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -2 / -3
Query: 367 GPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC*D*R 251
GPP G + NVAVRPLPALKENVKRVMFYC*D R
Sbjct: 244 GPPQGGPRSSTRFGNVAVRPLPALKENVKRVMFYC*DPR 128
Score = 57.9 bits (120), Expect(2) = 6e-058
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = +3 / +3
Query: 207 HHHHNDNCLLTASAQRQS*Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGP 368
H + + +T+ R S*Q*NMTR TFSLRAG GLTATF L+ P GGP
Sbjct: 84 HQYDSQVLQVTSR*LRGS*Q*NMTRLTFSLRAGRGLTATFPNLVLLRGPPCGGP 245
Score = 36.8 bits (74), Expect(2) = 1e-050
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2 / +2
Query: 266 VEHDALHVFLEGR*WPHSNICSTSPGVARPWWRATAC 376
V+HDAL VFLEG P SN+ WR C
Sbjct: 143 VKHDALDVFLEGGERPDSNVPKPGAAAWTALWRTATC 253
Score = 35.0 bits (70), Expect(2) = 3e-043
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1 / -2
Query: 362 STRGAQHQGWCCKCCCEAITCPQGKREARHV 270
ST + Q + CC+A PQGKR+ARHV
Sbjct: 239 STGRSTQQHQVWERCCQASPRPQGKRQARHV 147
Score = 32.2 bits (64), Expect(2) = 2e-041
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = +1 / +1
Query: 241 HQRSVNLSSRT*RASRFP*GQVMASQQHLQHQPWCCAPLVE 363
H +LSS+T*RA RFP*G+ A QQ Q C VE
Sbjct: 118 HGNCEDLSSKT*RA*RFP*GRGEA*QQRSQTWCCCVDRPVE 240
>gb|AV916245.1|AV916245 AV916245 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12e13 5', mRNA sequence
Length = 481
Score = 234 bits (505), Expect(2) = 9e-086
Identities = 89/96 (92%), Positives = 94/96 (97%)
Frame = -2 / +1
Query: 700 DRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTN 521
D+SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN F+AD +QTLTN
Sbjct: 190 DKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEMQTLTN 369
Query: 520 NLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 413
NLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEP+
Sbjct: 370 NLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPE 477
Score = 111 bits (237), Expect(2) = 1e-037
Identities = 57/91 (62%), Positives = 60/91 (65%)
Frame = +3 / -3
Query: 414 SGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGR 593
SGSM*N GGT +TERVH A V* +L V VC SA LFSS RT * AG
Sbjct: 476 SGSM*NRARNAARCA*YAGGTTETERVHRA*V*QRLFVNVCISSAEKLFSSQRTW**AGL 297
Query: 594 LVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
LVP +PA L R*KSNSVGW IFESTTVPG M
Sbjct: 296 LVPWIPA*LQR*KSNSVGWHIFESTTVPGKM 204
Score = 103 bits (220), Expect(2) = 9e-086
Identities = 44/57 (77%), Positives = 45/57 (78%)
Frame = -2 / +2
Query: 871 GVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAA 701
GVSEGQFYQVLLYELDAIRKACASLE +YQPPVTFVVVQKRHHT Q A
Sbjct: 17 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTXTVCKQSQRQXVA 187
Score = 89.0 bits (188), Expect(2) = 3e-021
Identities = 40/93 (43%), Positives = 57/93 (61%)
Frame = -1 / +3
Query: 695 KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQL 516
KW+H +C +D+P N V*FLP+ W+ G K + L C +G*EQ+ A+ +Q
Sbjct: 195 KWKHFTWNCC*FEDMPPNGV*FLPL*SRWNPGYK*ASSLPCPLG*EQLLSRRNADVDKQP 374
Query: 515 VLHVCQVHTLSINRSSCILCSSGSLPSSVLHGA 417
+LH+ VH L R +CIL +SG +P +VLHGA
Sbjct: 375 LLHLRTVHALCFRRPTCILRASGCIPGAVLHGA 473
Score = 82.6 bits (174), Expect(2) = 4e-023
Identities = 38/97 (39%), Positives = 64/97 (65%)
Frame = +2 / -2
Query: 419 LHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVLIPQNMIMGRTAC 598
LHV+P E QM ++CR +D A AP + V +VV + L + + VLIP++M++ C
Sbjct: 471 LHVEPRPECSQMRVICRWDDGNRARAPCVSVAKVVCQRLHFVC*EVVLIPEDMVVSWPTC 292
Query: 599 SLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGST 709
+L++S+ +VEIKL W+A L +++S+R V+T + +T
Sbjct: 291 TLDSSVTTEVEIKLRWVAYLRINNSSR*NVSTFVHAT 181
Score = 65.7 bits (137), Expect(2) = 1e-037
Identities = 30/42 (71%), Positives = 32/42 (76%)
Frame = +3 / -2
Query: 747 *RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTP 872
*RF TTT VTGGW* S DAQA +AS+S RTW*N PSLTP
Sbjct: 141 *RF*TTTNVTGGW*FGSRDAQALRIASNS*RRTW*NWPSLTP 16
Score = 45.5 bits (93), Expect(2) = 4e-023
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +2 / -1
Query: 743 VMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIP 877
++TLL+ DK RLVI CT L++ I+ +++NLVEL+ T+ P
Sbjct: 145 MVTLLNDDKRYRRLVIWF*GCTSLTDSIQLIKENLVELAFTNAXP 11
Score = 32.7 bits (65), Expect(2) = 3e-021
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -1 / +1
Query: 878 QGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPEASSHQ 738
+ W * +LPSS + C+ GLCI LP S CR +AS ++
Sbjct: 10 RXWR**RPILPSSPL*VGCYP*GLCIPRTKLPTSCNVCRRSKASPYK 150
>gb|CB874756.1|CB874756 HX06D16w HX Hordeum vulgare subsp. vulgare cDNA clone HX06D16
3-PRIME, mRNA sequence
Length = 635
Score = 271 bits (587), Expect(2) = 5e-083
Identities = 108/113 (95%), Positives = 109/113 (96%)
Frame = -2 / -3
Query: 718 NDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADG 539
NDQR DRSG ILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTAD
Sbjct: 633 NDQRTVDRSGXILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADE 454
Query: 538 LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 380
LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGS+ASGA
Sbjct: 453 LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASGA 295
Score = 182 bits (392), Expect(2) = 6e-054
Identities = 83/102 (81%), Positives = 84/102 (82%)
Frame = +3 / +2
Query: 381 APLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLF 560
APLA DPLS VSGSM*N GGTIDTERVHLAYV*HKL VRVCN SAVNLF
Sbjct: 296 APLAMDPLSEVSGSM*NRARKAAKCA*YAGGTIDTERVHLAYV*HKLFVRVCNSSAVNLF 475
Query: 561 SSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
SSH T** AGRLVP*MPAWLH+*KSNSVGWQIFESTTVPGSM
Sbjct: 476 SSHST***AGRLVP*MPAWLHK*KSNSVGWQIFESTTVPGSM 601
Score = 172 bits (371), Expect(2) = 4e-047
Identities = 69/101 (68%), Positives = 76/101 (75%)
Frame = +1 / +3
Query: 418 APCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPTEHDNGQDGL 597
APCKTE GRLP+ H+M E +LI S CT HTC+TSC EFATHQ * CSHP DN QDGL
Sbjct: 333 APCKTEPGRLPNVHNMLEAQLIQSGCT*HTCSTSCLLEFATHQQ*TCSHPIVRDNEQDGL 512
Query: 598 FPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHC 720
FPECQ G T RNQTR DGKSL+ QC AVC FY+Q+ DHC
Sbjct: 513 FPECQRGYTSRNQTRSDGKSLNQQQCQAVCXRFYQQYVDHC 635
Score = 155 bits (334), Expect(3) = 9e-044
Identities = 72/113 (63%), Positives = 78/113 (69%)
Frame = -3 / -1
Query: 720 TMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLM 541
TMI+VL IE TYC AL QRFAI+PSLISTC A LAFREQAVL II + GMRT+ LM
Sbjct: 635 TMINVLLIEAXTYCLALLLIQRFAIRPSLISTCVATLAFREQAVLLIITYYGMRTSSLLM 456
Query: 540 GCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLWRAV 382
CKL TTC TRM GA A YQ L H M IWQPS LGFTWS+ W+ V
Sbjct: 455 SCKL*QTTCATRMLGAPALYQLCLQHIMHIWQPSGLGFTWSRTPRIVGPWQVV 297
Score = 152 bits (326), Expect(2) = 5e-040
Identities = 73/112 (65%), Positives = 85/112 (75%)
Frame = +2 / +1
Query: 383 TARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVL 562
T H + + LHVKPS EGCQM I+C R++*Y A AP IRV QVV SLQ IS + VL
Sbjct: 298 TTCHGPTIRGVRLHVKPSPEGCQMCIICWRHN*YRAGAPSIRVAQVVC*SLQLISSELVL 477
Query: 563 IPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLII 718
IP +IM RTACSLNAS+A QVEIKLG MANL*+++SARQYV+ SI STLII
Sbjct: 478 IP*YVIMSRTACSLNASVATQVEIKLGRMANL*INNSARQYVSASINSTLII 633
Score = 147 bits (316), Expect(2) = 2e-037
Identities = 69/101 (68%), Positives = 78/101 (77%)
Frame = -1 / -2
Query: 719 Q*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*W 540
Q*S C *K HTA HC KDLPS+RV*FL V P WHSGNKPSC LS ++G*EQ++ *
Sbjct: 634 Q*STYC**KRXHTAWHCC*FKDLPSDRV*FLLV*PRWHSGNKPSCSLSRTMG*EQVHC** 455
Query: 539 VANSHQQLVLHVCQVHTLSINRSSCILCSSGSLPSSVLHGA 417
VANS++QLVLHVC VH L IN +S ILC+ GSLP SVLHGA
Sbjct: 454 VANSNKQLVLHVC*VHPLCINCASSILCTFGSLPGSVLHGA 332
Score = 57.0 bits (118), Expect(2) = 5e-083
Identities = 24/34 (70%), Positives = 24/34 (70%)
Frame = -2 / -3
Query: 361 PPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
PP NVAVRPLPALKENVKRVMFYC*
Sbjct: 288 PPQGGRNNRAFGNVAVRPLPALKENVKRVMFYC* 187
Score = 49.2 bits (101), Expect(2) = 6e-054
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = +3 / +2
Query: 252 RQS*Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGG 362
R *Q*NMTRFTFS RAG GLTATF L+ GG
Sbjct: 179 RPP*Q*NMTRFTFSFRAGRGLTATFPNALLLRPPCGG 289
Score = 35.9 bits (72), Expect(2) = 4e-047
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1 / +3
Query: 256 NLSSRT*RASRFP*GQVMASQQHLQHQPWCCAPL 357
+L+S+T* ASRFP G+ A QQH Q +C P+
Sbjct: 183 HLNSKT*HASRFPSGRGGA*QQHSQTPCYCVHPV 284
Score = 35.0 bits (70), Expect(3) = 9e-044
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1 / -2
Query: 326 KCCCEAITCPQGKREARHV 270
+CCC+A P+GKREA HV
Sbjct: 253 ECCCQAPPRPEGKREACHV 197
Score = 32.7 bits (65), Expect(2) = 5e-040
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 266 VEHDALHVFLEGR*WPHSNI 325
V+HD LHVFL+G P SNI
Sbjct: 193 VKHDTLHVFLQGGEGPDSNI 252
Score = 29.0 bits (57), Expect(2) = 2e-037
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 330 LQMLL*GHYLPSRKT*SASCSTAKI 256
L MLL G P RKT*S SC T K+
Sbjct: 257 LGMLLSGPSPP*RKT*SVSCFTVKV 183
Score = 24.9 bits (48), Expect(3) = 9e-044
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1 / -2
Query: 371 PWPSTRGAQHQGWCCKCC 318
PWPST Q QG CC
Sbjct: 295 PWPSTGWTQ*QGVWECCC 242
>gb|BU971142.1|BU971142 HB16L19r BC Hordeum vulgare subsp. vulgare cDNA clone HB16L19
5-PRIME, mRNA sequence
Length = 470
Score = 166 bits (358), Expect(2) = 4e-077
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = -2 / +1
Query: 709 RAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQT 530
+ D+SGNILPGTVVD+ ICHPTEFDFYLCSHAGIQGTSRP HYHVL+DEN FTADGLQ
Sbjct: 250 KETDKSGNILPGTVVDTNICHPTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQ 429
Query: 529 LTNNLCYTYARCT 491
LTNNLCYTYARCT
Sbjct: 430 LTNNLCYTYARCT 468
Score = 142 bits (304), Expect(2) = 4e-077
Identities = 57/75 (76%), Positives = 65/75 (86%)
Frame = -2 / +1
Query: 934 LLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQ 755
LL+SF++ TG KP RIIFYRDGVSEGQF QVL+YE+DAIRKACASL++DYQP VTFVVVQ
Sbjct: 31 LLVSFYKKTGYKPSRIIFYRDGVSEGQFAQVLMYEMDAIRKACASLQADYQPKVTFVVVQ 210
Query: 754 KRHHTRLFVNNHNDQ 710
KRHHTRLF H +
Sbjct: 211 KRHHTRLFPEVHGKE 255
Score = 107 bits (228), Expect(2) = 2e-044
Identities = 48/66 (72%), Positives = 52/66 (78%)
Frame = +3 / -1
Query: 489 RVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFEST 668
RVH AYV*H+LLV C+PSAV FSS RT * G LVP*+PAWLHR*KSNSVGW + ST
Sbjct: 470 RVHRAYV*HRLLVSCCSPSAVKPFSSKRTW**VGLLVP*IPAWLHR*KSNSVGWHMLVST 291
Query: 669 TVPGSM 686
TVPG M
Sbjct: 290 TVPGRM 273
Score = 92.3 bits (195), Expect(2) = 2e-044
Identities = 43/55 (78%), Positives = 43/55 (78%)
Frame = +3 / -1
Query: 753 FWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVAL 917
FWTTT VT G *S DAQAFLMAS SY RTW NCPSLTPSL*NMILLG PV L
Sbjct: 212 FWTTTNVTLG**SACKDAQAFLMASISYIRTWANCPSLTPSL*NMILLGL*PVFL 48
Score = 83.1 bits (175), Expect(2) = 2e-032
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +2 / -3
Query: 707 TLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIPVEY 886
+L V + ++P VM LD++K ++ L+IRLQ CT L +GI F+ QNL EL T+PVEY
Sbjct: 258 SLFSVHLREEPCVMPFLDNNKCHFGLIIRLQRCTSLPDGIHFIHQNLGELPFAHTVPVEY 79
Query: 887 DPLGFLSS 910
DP GF++S
Sbjct: 78 DPAGFITS 55
Score = 76.2 bits (160), Expect(2) = 2e-032
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +2 / -3
Query: 494 APGIRVTQVVGESLQPISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHS 673
A + V QVVGE LQPI + V I ++M++ +AC+LN MA QVEIKLG MA + V+H
Sbjct: 465 ASSVCVAQVVGELLQPIGSETVFIEEDMVVSWSACALNTGMATQVEIKLGGMAYVGVNHG 286
Query: 674 ARQYVATSI 700
+R+ V+T +
Sbjct: 285 SRKDVSTFV 259
Score = 72.5 bits (152), Expect(2) = 5e-025
Identities = 32/60 (53%), Positives = 36/60 (60%)
Frame = +1 / -2
Query: 742 CDDASGPRQK*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HHPCRI*SSWVFVQSPSR 921
CD SG +Q L A N MH+P *WH T+ELGRT H PCRI*S WV+ QS R
Sbjct: 223 CDAFSGQQQMSLWADNPPAKMHKPS*WHPFHTSELGRTALRSHRPCRI*SCWVYNQSSYR 44
Score = 72.1 bits (151), Expect(2) = 8e-026
Identities = 30/69 (43%), Positives = 47/69 (68%)
Frame = -1 / +3
Query: 695 KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQL 516
KW+H + + G + +PS+RV*FLPV PC +SG+K + L C + *++ + W A +HQQ
Sbjct: 264 KWKHPSWNRG*HQHMPSHRV*FLPV*PCRYSGHKQTNSLPCPLR*KRFHCRWAAAAHQQP 443
Query: 515 VLHVCQVHT 489
VLH+ +H+
Sbjct: 444 VLHIRSMHS 470
Score = 65.2 bits (136), Expect(2) = 8e-026
Identities = 30/60 (50%), Positives = 36/60 (60%)
Frame = -1 / +3
Query: 911 DWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPEASSHQVV 732
DW TQ+DHILQG C+ V PSS V CH +GLCI L A S C PE +SH+ +
Sbjct: 54 DWL*TQQDHILQGRCERRAVRPSSDV*NGCHQEGLCIFAGGLSAQSDICCCPEKASHKAL 233
Score = 62.0 bits (129), Expect(2) = 5e-025
Identities = 29/68 (42%), Positives = 34/68 (50%)
Frame = +1 / -2
Query: 493 CTWHTCNTSCW*EFATHQP*ICSHPTEHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQ 672
C C+T CW* A H+ * H H + L PE +HG TGRNQTR DG P+
Sbjct: 466 CIERMCSTGCW*AAAAHRQ*NRFHRRGHGSELVCLCPEYRHGYTGRNQTRWDGICWCQPR 287
Query: 673 CPAVCCHF 696
C HF
Sbjct: 286 FQEGCFHF 263
>gb|BJ451080.1|BJ451080 BJ451080 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak32j21 5', mRNA sequence
Length = 576
Score = 278 bits (601), Expect = 4e-074
Identities = 114/149 (76%), Positives = 122/149 (81%)
Frame = -2 / +1
Query: 781 PPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQ 602
P VV ++ H N+++ + +SGNILPGTVVDSKICHPTEFDFYLCSHAGIQ
Sbjct: 103 PVTFVVVQKRHHTRLFANNHNDQRSVDRKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQ 282
Query: 601 GTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYM 422
GTSRPAHYHVLWDEN FTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYM
Sbjct: 283 GTSRPAHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYM 462
Query: 421 EPDTSDSGSVASGATTSRGPPPGARNTRA 335
E DTSD GSVASGATT RGP +RA
Sbjct: 463 ELDTSDGGSVASGATTGRGPTGARGGSRA 549
Score = 170 bits (365), Expect(3) = 5e-061
Identities = 80/108 (74%), Positives = 83/108 (76%)
Frame = +3 / -2
Query: 363 GPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNP 542
GPR VVAPLAT+P S VS SM*N GGTIDTERVHLA V*H+L VRVC P
Sbjct: 521 GPRPVVAPLATEPPSEVSSSM*NRARKAAR*A*YAGGTIDTERVHLA*V*HRLFVRVCKP 342
Query: 543 SAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
SAV LFSS RT * AGRLVP*+PAWL R*KSNSVGW IFESTTVPGSM
Sbjct: 341 SAVKLFSSQRTW*CAGRLVP*IPAWLQR*KSNSVGWHIFESTTVPGSM 198
Score = 140 bits (300), Expect(2) = 4e-050
Identities = 66/122 (54%), Positives = 86/122 (70%)
Frame = +2 / -1
Query: 362 RATACRSTARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQP 541
RATACR T R R+ V I HV+PSS+ ++SIVCRR++ Y AP + V QVV ESLQ
Sbjct: 522 RATACRGTTRDRATVGGIQFHVEPSSKSREVSIVCRRHNRYRTGAPCVGVAQVVRESLQT 343
Query: 542 ISRKFVLIPQNMIMGRTACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIV 721
I K VLIP++M+M R ACSLN SMA +VEI+L MA L*++ RQYV+T +T +IV
Sbjct: 342 IRGKIVLIPKDMVMRRAACSLNTSMATKVEIELSRMAYL*INDGTRQYVSTFSINTSLIV 163
Query: 722 II 727
++
Sbjct: 162 VV 157
Score = 139 bits (299), Expect(2) = 8e-067
Identities = 59/114 (51%), Positives = 75/114 (65%)
Frame = -1 / +3
Query: 695 KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQL 516
KW+HTA + KD+PS V FLP+ PCW+SGNKP C L C +G*EQ Y W A+SH+Q
Sbjct: 189 KWKHTAWYRR*FKDMPSY*VRFLPL*PCWYSGNKPPCALPCPLG*EQFYRGWFADSHEQP 368
Query: 515 VLHVCQVHTLSINRSSCILCSSGSLPSSVLHGARYK*QRICGERCYDKPWPSTR 354
VLH+ +VH I+ +S ILCS SSVLHG Y + + E C+D+PWP R
Sbjct: 369 VLHLRKVHPFCIDCASGILCSPRGFSSSVLHGTGYLRRWLGREWCHDRPWPYWR 530
Score = 134 bits (288), Expect(2) = 8e-067
Identities = 54/59 (91%), Positives = 56/59 (94%)
Frame = -2 / +1
Query: 871 GVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADR 695
GVSEGQFYQVLLYELDAIRKACASLE +YQPPVTFVVVQKRHHTRLF NNHNDQR+ DR
Sbjct: 10 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRSVDR 186
Score = 132 bits (283), Expect(2) = 4e-043
Identities = 59/115 (51%), Positives = 69/115 (60%)
Frame = +1 / -3
Query: 364 GHGLS*HRSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATH 543
GHGLS H S Y PC+TEL + EHSM E + I + CT C+T C *E A H
Sbjct: 520 GHGLSWHHSRPSHRRRYPVPCRTELEKPRGEHSMPEAQSIQNGCTLRRCSTGCS*ESANH 341
Query: 544 QP*ICSHPTEHDNGQDGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQH 708
* CSHP H N Q GLFPE QHG GRN+T+ DG SL+ + AVC HF+ QH
Sbjct: 340 PR*NCSHPKGHGNAQGGLFPEYQHGYKGRNRTQ*DGISLNQRRYQAVCFHFFYQH 176
Score = 111 bits (236), Expect(2) = 7e-039
Identities = 66/135 (48%), Positives = 74/135 (54%)
Frame = -3 / +2
Query: 720 TMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLM 541
T+ VL +V TYC QR+AI S IST AML FREQA L I M GMRT L M
Sbjct: 164 TISEVLIEKVETYCLVPSLIQRYAILLSSISTFVAMLVFREQAALRITMSFGMRTILPRM 343
Query: 540 GCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLWRAVLRQAVAL 361
C+LS TTC T GA Y+ L HTML + ELG TW+ I T R V RQAVAL
Sbjct: 344 VCRLSRTTCATPTQGAPVLYRLCLRHTMLTSRLFELGSTWNWIPPTVARSRVVPRQAVAL 523
Query: 360 HQGRATPGLVLQMLL 316
A L +LL
Sbjct: 524 LAHAAAVELQGMLLL 568
Score = 78.5 bits (165), Expect(2) = 4e-050
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +3 / -2
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTP 872
V* RFWTTT VTGG * S DAQAFL+ASSSYNRT *NCPSLTP
Sbjct: 140 V*WRFWTTTNVTGG**LGSKDAQAFLIASSSYNRT**NCPSLTP 9
Score = 78.5 bits (165), Expect(3) = 5e-061
Identities = 33/61 (54%), Positives = 43/61 (70%)
Frame = +2 / -1
Query: 695 SIGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTI 874
SI ++LI+V++ K P +M LDH K N L+I LQ C GLSN IK +QQNL+ELS +T
Sbjct: 186 SINTSLIVVVVGK*PCMMAFLDHHKCNGWLIIGLQGCAGLSNRIKLIQQNLIELSFANTX 7
Query: 875 P 877
P
Sbjct: 6 P 4
Score = 70.3 bits (147), Expect(2) = 7e-039
Identities = 33/61 (54%), Positives = 38/61 (62%)
Frame = -3 / +2
Query: 876 GMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSWSRSVITPGCLLIITMISVLPI 697
GMV +DSS +FCC +LM LERP H WS I S L L WSR+ I G L T IS + I
Sbjct: 5 GMVLAKDSSIRFCCMSLMRLERPAHPWSPIISHPLHLWWSRNAIIHGYLPTTTTISEVLI 184
Query: 696 E 694
E
Sbjct: 185 E 187
Score = 62.9 bits (131), Expect(2) = 4e-043
Identities = 31/60 (51%), Positives = 32/60 (53%)
Frame = +1 / -3
Query: 694 FYRQHADHCDY*QTTWCDDASGPRQK*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HH 873
FY+ AD C Q D SGP Q * A N P M RPF* HQ TTE RTV *HH
Sbjct: 187 FYQHFADRCGCWQIAVYDGVSGPPQM*RVADNWAPRMRRPF*SHQAHTTEPDRTVLR*HH 8
Score = 25.4 bits (49), Expect(3) = 5e-061
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3 / -2
Query: 309 GLTATFAAPALVLRAPGG 362
GLTATF A L RAP G
Sbjct: 572 GLTATFPAALLPPRAPVG 519
>gb|BJ468650.1|BJ468650 BJ468650 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39l05 3', mRNA sequence
Length = 673
Score = 229 bits (495), Expect(2) = 5e-073
Identities = 90/91 (98%), Positives = 90/91 (98%)
Frame = -2 / -3
Query: 652 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIV 473
CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTAD LQTLTNNLCYTYARCTRSVSIV
Sbjct: 671 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIV 492
Query: 472 PPAYYAHLAAFRARFYMEPDTSDSGSVASGA 380
PPAYYAHLAAFRARFYMEPDTSDSGSVASGA
Sbjct: 491 PPAYYAHLAAFRARFYMEPDTSDSGSVASGA 399
Score = 161 bits (347), Expect(2) = 2e-050
Identities = 72/91 (79%), Positives = 74/91 (81%)
Frame = +3 / +1
Query: 381 APLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLF 560
APLATDPLS VSGSM*N GGTIDTERVH AYV*H+L VRVCN SAVNLF
Sbjct: 400 APLATDPLSEVSGSM*NRARKAARWA*YAGGTIDTERVHRAYV*HRLFVRVCNSSAVNLF 579
Query: 561 SSHRT**WAGRLVP*MPAWLHR*KSNSVGWQ 653
SS RT**WAGRLVP*MPAWLH+*KSNSVGWQ
Sbjct: 580 SSQRT**WAGRLVP*MPAWLHK*KSNSVGWQ 672
Score = 161 bits (346), Expect(2) = 5e-039
Identities = 69/107 (64%), Positives = 79/107 (73%)
Frame = -1 / -2
Query: 653 LPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHVCQVHTLSINR 474
LPS+R+ FL V PCWHSGNKP+CPLSCS+G EQIY * VANSH+Q VLHVC +H L I+
Sbjct: 672 LPSDRIRFLLV*PCWHSGNKPACPLSCSLGREQIYC**VANSHKQPVLHVCSMHPLCIDC 493
Query: 473 SSCILCSSGSLPSSVLHGARYK*QRICGERCYDKPWPSTRGAQHQGW 333
SSCILC SGSLP SVLHGA + QR+ GERC + QHQ W
Sbjct: 492 SSCILCPSGSLPGSVLHGAGHLRQRVRGERCTWRSSTGRSTQQHQVW 352
Score = 152 bits (326), Expect(2) = 3e-041
Identities = 61/91 (67%), Positives = 68/91 (74%)
Frame = +1 / +2
Query: 382 HRSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICS 561
HRSP+ RC APC+TE GRLPD HSMQEE+ I S C HTC+T C *EFATHQ *ICS
Sbjct: 401 HRSPRTRCRRCPAPCRTEPGRLPDGHSMQEEQSIQSGCIEHTCSTGCL*EFATHQQ*ICS 580
Query: 562 HPTEHDNGQDGLFPECQHGCTGRNQTRLDGK 654
P EHD+GQ GLFPECQHG T RN+ DG+
Sbjct: 581 RPREHDSGQAGLFPECQHGYTSRNRILSDGR 673
Score = 138 bits (297), Expect(2) = 1e-036
Identities = 62/90 (68%), Positives = 66/90 (73%)
Frame = -3 / -1
Query: 651 AIQPSLISTCAAMLAFREQAVLPIIMFCGMRTNLRLMGCKLSPTTCVTRMPGAHAQYQSF 472
AI+ + ISTC AMLAFREQA LP IMF G RTNL LM CKLS TTC TRM A A Y+ F
Sbjct: 670 AIRQNSISTCVAMLAFREQAGLPTIMFSGTRTNLLLMSCKLSQTTCATRMLDAPALYRLF 491
Query: 471 LLHTMLIWQPSELGFTWSQIQVTADLWRAV 382
LLHTM IWQPS LG TWS+ TA WRAV
Sbjct: 490 LLHTMPIWQPSGLGSTWSRTPPTAGPWRAV 401
Score = 133 bits (284), Expect(2) = 4e-034
Identities = 62/90 (68%), Positives = 69/90 (76%)
Frame = +2 / +3
Query: 383 TARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVL 562
TARH AV + LHV+PS EGCQM IVCRRN+ Y A A IRV QVV ESLQ IS KFVL
Sbjct: 402 TARHGPAVGGVRLHVEPSPEGCQMGIVCRRNNRYRAGASSIRVAQVVCESLQLISSKFVL 581
Query: 563 IPQNMIMGRTACSLNASMAAQVEIKLGWMA 652
+P+NMI+GR ACSLNASMA QVEI+ MA
Sbjct: 582 VPENMIVGRPACSLNASMATQVEIEFCRMA 671
Score = 65.7 bits (137), Expect(2) = 5e-073
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -2 / -3
Query: 367 GPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC*D*R 251
GPP G + NVAVRPLPALKENVKRVMFYC*D R
Sbjct: 392 GPPQGGPRSSTRFGNVAVRPLPALKENVKRVMFYC*DPR 276
Score = 57.9 bits (120), Expect(2) = 2e-050
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = +3 / +1
Query: 207 HHHHNDNCLLTASAQRQS*Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGP 368
H + + +T+ R S*Q*NMTR TFSLRAG GLTATF L+ P GGP
Sbjct: 232 HQYDSQVLQVTSR*LRGS*Q*NMTRLTFSLRAGRGLTATFPNLVLLRGPPCGGP 393
Score = 36.8 bits (74), Expect(2) = 3e-041
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2 / +3
Query: 266 VEHDALHVFLEGR*WPHSNICSTSPGVARPWWRATAC 376
V+HDAL VFLEG P SN+ WR C
Sbjct: 291 VKHDALDVFLEGGERPDSNVPKPGAAAWTALWRTATC 401
Score = 35.0 bits (70), Expect(2) = 1e-036
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1 / -2
Query: 362 STRGAQHQGWCCKCCCEAITCPQGKREARHV 270
ST + Q + CC+A PQGKR+ARHV
Sbjct: 387 STGRSTQQHQVWERCCQASPRPQGKRQARHV 295
Score = 32.2 bits (64), Expect(2) = 4e-034
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = +1 / +2
Query: 241 HQRSVNLSSRT*RASRFP*GQVMASQQHLQHQPWCCAPLVE 363
H +LSS+T*RA RFP*G+ A QQ Q C VE
Sbjct: 266 HGNCEDLSSKT*RA*RFP*GRGEA*QQRSQTWCCCVDRPVE 388
Score = 22.6 bits (43), Expect(2) = 5e-039
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3 / -1
Query: 132 CDILLLRWACR 100
C+ LLL W CR
Sbjct: 58 CEKLLLSWLCR 26
>gb|BU996805.1|BU996805 HM14N04r HM Hordeum vulgare subsp. vulgare cDNA clone HM14N04
5-PRIME, mRNA sequence
Length = 612
Score = 201 bits (433), Expect(2) = 3e-063
Identities = 77/116 (66%), Positives = 93/116 (80%)
Frame = -2 / +2
Query: 718 NDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADG 539
+D + D SGN++PGTVVD +ICHPTEFDF+LCSHAGI+GTSRPAHYHVL D+N F+AD
Sbjct: 248 SDGKYQDDSGNVMPGTVVDRQICHPTEFDFFLCSHAGIKGTSRPAHYHVLRDDNNFSADD 427
Query: 538 LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTS 371
LQ+LTNNLCYTYA CTRSVS PPAYYAH AFRARFY+ + +++G+ S
Sbjct: 428 LQSLTNNLCYTYASCTRSVSTAPPAYYAHKLAFRARFYLAQVPDMASEISAGSAAS 595
Score = 111 bits (237), Expect(2) = 4e-030
Identities = 50/71 (70%), Positives = 54/71 (76%)
Frame = +3 / -1
Query: 468 GGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGRLVP*MPAWLHR*KSNSVG 647
GG +DTERV LAYV*H+L VR C SA+ L SS T * AGRLVP +PAWL R KSNSVG
Sbjct: 498 GGAVDTERVQLAYV*HRLFVRDCRSSALKLLSSRSTW*CAGRLVPLIPAWLQRKKSNSVG 319
Query: 648 WQIFESTTVPG 680
WQI STTVPG
Sbjct: 318 WQICLSTTVPG 286
Score = 95.9 bits (203), Expect(2) = 9e-027
Identities = 43/90 (47%), Positives = 60/90 (66%)
Frame = -1 / +1
Query: 695 KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQL 516
+W+ A H G DLP NRV*FLP+ PCW GNKPSC L + *+Q+ * A S++Q
Sbjct: 271 QWKCYARHSG**ADLPPNRV*FLPL*PCWDQGNKPSCALPRAAR*QQLQC**PAVSYKQP 450
Query: 515 VLHVCQVHTLSINRSSCILCSSGSLPSSVL 426
VLHVC++H+L ++ SSC+L S + ++L
Sbjct: 451 VLHVCKLHSLRVDCSSCVLRS*ACVSCAIL 540
Score = 61.6 bits (128), Expect(2) = 3e-063
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = -2 / +2
Query: 934 LLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQ 755
LL+SF + + KP+++IFYRDGVSEGQF VL E+ I KA +L + P VV +
Sbjct: 44 LLLSFEQHSKHKPQQLIFYRDGVSEGQFRMVLENEIPEIEKAWKALYNVKPPITFIVVQK 223
Query: 754 KRH 746
+ H
Sbjct: 224 RHH 232
Score = 44.6 bits (91), Expect(2) = 9e-027
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = -2 / +2
Query: 784 QPPVTFVVVQKRHHTRLF 731
+PP+TF+VVQKRHHTRLF
Sbjct: 191 KPPITFIVVQKRHHTRLF 244
Score = 40.5 bits (82), Expect(2) = 4e-030
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +3 / -1
Query: 798 NDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKEMRRFPNHATRDS 962
N AF ++ S+++T N PSLTPSL*N+ G C E R F +R S
Sbjct: 180 NAFHAFSISGISFSKTILN*PSLTPSL*NISCWGLCLECCSNERRSFLAMPSRPS 16
>gb|AV921670.1|AV921670 AV921670 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12e13 3', mRNA sequence
Length = 589
Score = 159 bits (341), Expect(3) = 4e-063
Identities = 61/78 (78%), Positives = 70/78 (89%)
Frame = -2 / -2
Query: 604 QGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFY 425
QGTSRPAHYHVLWDEN F+AD +QTLTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFY
Sbjct: 504 QGTSRPAHYHVLWDENNFSADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFY 325
Query: 424 MEPDTSDSGSVASGATTS 371
MEP+ S++ + S + T+
Sbjct: 324 MEPELSENHTSKSSSGTN 271
Score = 77.1 bits (162), Expect(3) = 4e-063
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = -2 / -1
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQG 599
NILPGTVVDSKICHPTEFDFYLCSHAGI G
Sbjct: 589 NILPGTVVDSKICHPTEFDFYLCSHAGIPG 500
Score = 63.4 bits (132), Expect(3) = 9e-024
Identities = 35/63 (55%), Positives = 37/63 (58%)
Frame = +3 / +2
Query: 414 SGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLFSSHRT**WAGR 593
SGSM*N GGT +TERVH A V* +L V VC SA LFSS RT * AG
Sbjct: 314 SGSM*NRARNAARCA*YAGGTTETERVHRA*V*QRLFVNVCISSAEKLFSSQRTW**AGL 493
Query: 594 LVP 602
LVP
Sbjct: 494 LVP 502
Score = 55.6 bits (115), Expect(3) = 9e-024
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +3 / +3
Query: 594 LVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
L P +PA L R*KSNSVGW IFESTTVPG M
Sbjct: 495 LYPGIPA*LQR*KSNSVGWHIFESTTVPGKM 587
Score = 44.6 bits (91), Expect(3) = 4e-063
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = -2 / -2
Query: 337 AGAANVAVRPLPALKENVKRVMFYC* 260
+G +V+PLPA+KE VKRVMFYC*
Sbjct: 282 SGTNGTSVKPLPAVKEKVKRVMFYC* 205
Score = 29.0 bits (57), Expect(3) = 9e-024
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / +2
Query: 264 Q*NMTRFTFSLRAGNGLT 317
Q*N+T FTFS AG G T
Sbjct: 209 Q*NITLFTFSFTAGKGFT 262
>gb|BF265852.2|BF265852 HV_CEa0013I03f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013I03f, mRNA sequence
Length = 751
Score = 221 bits (476), Expect(2) = 4e-060
Identities = 92/113 (81%), Positives = 96/113 (84%)
Frame = -2 / +2
Query: 973 PKGGLSLVA*LGNLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 794
P+ G + LLISF RATGQKP+RIIFYRDGVSEGQFYQVLLYELDAIRKACASLE
Sbjct: 380 PQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 559
Query: 793 SDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEF 635
+YQPPVTFVVVQKRHHTRLF NNHND R DRSGNILPGTVVDSKICHP F
Sbjct: 560 PNYQPPVTFVVVQKRHHTRLFANNHNDHRTVDRSGNILPGTVVDSKICHPNRF 718
Score = 153 bits (329), Expect(3) = 1e-041
Identities = 67/97 (69%), Positives = 83/97 (85%)
Frame = +2 / -1
Query: 647 MANL*VHHSARQYVATSIGSTLIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGI 826
MANL*+++S+RQYV+ SI ST+IIV+I+K+PGVM LLD+ KSNW LVI LQ T LSNGI
Sbjct: 706 MANL*INNSSRQYVSASINSTVIIVVISKKPGVMPLLDNYKSNWGLVIGLQGRTCLSNGI 527
Query: 827 KFVQQNLVELSLTDTIPVEYDPLGFLSSRPPERNEKV 937
KF+Q+NL+EL+L DTIPV+YD LGFLS P ERNEK+
Sbjct: 526 KFIQKNLIELALADTIPVKYDSLGFLSGCPLERNEKL 416
Score = 141 bits (302), Expect(3) = 9e-039
Identities = 62/99 (62%), Positives = 72/99 (72%)
Frame = -1 / +1
Query: 932 SHFFLEGDWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPE 753
SHFF EG+ T+T E+HILQGWCQ G VL SS V T*CH*KG+C++G LP SYFC PE
Sbjct: 421 SHFFQEGNRTETPENHILQGWCQRGPVLSSSSV*T*CH*KGMCVLGAQLPTPSYFCSCPE 600
Query: 752 ASSHQVVC**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV 636
A+SHQ C** Q*S C *K +HTA +C KDLPS +
Sbjct: 601 AASHQAFC**PQ*SPYC**KRKHTAWNCC*FKDLPSQPI 717
Score = 141 bits (302), Expect(2) = 3e-034
Identities = 61/96 (63%), Positives = 66/96 (68%)
Frame = +1 / -3
Query: 646 DGKSLSPPQCPAVCCHFYRQHADHCDY*QTTWCDDASGPRQK*LEAGNQTPMMHRPF*WH 825
DGKSL+ Q AVC FY+Q+ DHC Y*Q WCD ASG QK*L GN P H PF*WH
Sbjct: 707 DGKSLNQQQFQAVCFRFYQQYGDHCGY*QKAWCDAASGQLQK*LGVGNWAPRTHMPF*WH 528
Query: 826 QVRTTELGRTVPH*HHPCRI*SSWVFVQSPSRKK*E 933
QV T EL RT P *HHPC+I* S V V+ PS KK*E
Sbjct: 527 QVHTEELDRTGPR*HHPCKI*FSGVSVRLPS*KK*E 420
Score = 134 bits (287), Expect = 8e-031
Identities = 65/97 (67%), Positives = 70/97 (72%)
Frame = -3 / +3
Query: 936 TFSFLSGGRLDKNPRGSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSWS 757
+FSFLS G+ D+NPR SY TGMVS R SS KF C NLMPLER V WS IT+ QLLL S
Sbjct: 417 SFSFLSRGQPDRNPRESYFTGMVSARASSIKFFCMNLMPLERHVRPWSPITNPQLLL*LS 596
Query: 756 RSVITPGCLLIITMISVLPIEVATYCRALWWTQRFAI 646
RS ITPG LLI TMI+VL IE TYC L QRFAI
Sbjct: 597 RSGITPGFLLITTMITVLLIEAETYCLELLLIQRFAI 707
Score = 117 bits (251), Expect(2) = 3e-032
Identities = 54/64 (84%), Positives = 54/64 (84%)
Frame = +3 / -2
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQ 920
V* RFWTTTKVTGGW* S DA AFLMASSSY RT *N PSLTPSL*NMIL GFCPVAL
Sbjct: 612 V*CRFWTTTKVTGGW*LGSKDAHAFLMASSSYRRT**NWPSLTPSL*NMILWGFCPVALL 433
Query: 921 KEMR 932
KEMR
Sbjct: 432 KEMR 421
Score = 40.9 bits (83), Expect(2) = 3e-032
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3 / -2
Query: 636 NSVGWQIFESTTVPGSM 686
N +GWQIFESTTVPGSM
Sbjct: 717 NRLGWQIFESTTVPGSM 667
Score = 33.6 bits (67), Expect(3) = 9e-039
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -1 / +2
Query: 977 DPQRGTVSGGMIRE 936
DPQRGTV+GGMI+E
Sbjct: 377 DPQRGTVTGGMIKE 418
Score = 31.3 bits (62), Expect(2) = 4e-060
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 646 PTEFDFYLCSHAGI 605
PT+F FYLCSHA I
Sbjct: 708 PTDFGFYLCSHACI 749
Score = 28.1 bits (55), Expect(3) = 1e-041
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2 / -3
Query: 605 NASMAAQVEIKLGW 646
NAS+A QVE K+GW
Sbjct: 749 NASVATQVESKIGW 708
Score = 26.7 bits (52), Expect(3) = 1e-041
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / -3
Query: 932 KVP*SCHQRQSPFGD 976
+ P*SCHQ Q FGD
Sbjct: 422 EAP*SCHQSQFLFGD 378
Score = 24.4 bits (47), Expect(2) = 3e-034
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / -1
Query: 606 MPAWLHR*KSNSVG 647
M AWLH+* SVG
Sbjct: 748 MQAWLHK*NPKSVG 707
Score = 24.0 bits (46), Expect(3) = 9e-039
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / +1
Query: 645 QPSLISTCAAMLAF 604
QP L STC A LAF
Sbjct: 709 QPILDSTCVATLAF 750
>gb|CB875233.1|CB875233 HX07K22w HX Hordeum vulgare subsp. vulgare cDNA clone HX07K22
3-PRIME, mRNA sequence
Length = 603
Score = 195 bits (420), Expect(2) = 4e-060
Identities = 78/80 (97%), Positives = 79/80 (98%)
Frame = -2 / -3
Query: 619 SHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAF 440
SHAGIQGTSRPAHYHVLWDENKFTAD LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAF
Sbjct: 601 SHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAF 422
Query: 439 RARFYMEPDTSDSGSVASGA 380
RARFYMEPDTSDSGS+ASGA
Sbjct: 421 RARFYMEPDTSDSGSMASGA 362
Score = 131 bits (281), Expect(2) = 9e-039
Identities = 62/80 (77%), Positives = 62/80 (77%)
Frame = +3 / +3
Query: 381 APLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNPSAVNLF 560
APLA DPLS VSGSM*N GGTIDTERVHLAYV*HKL VRVCN SAVNLF
Sbjct: 363 APLAMDPLSEVSGSM*NRARKAAKCA*YAGGTIDTERVHLAYV*HKLFVRVCNSSAVNLF 542
Query: 561 SSHRT**WAGRLVP*MPAWL 620
SSH T** AGRLVP*MPAWL
Sbjct: 543 SSHST***AGRLVP*MPAWL 602
Score = 116 bits (248), Expect(2) = 3e-030
Identities = 47/67 (70%), Positives = 51/67 (76%)
Frame = +1 / +1
Query: 418 APCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQP*ICSHPTEHDNGQDGL 597
APCKTE GRLP+ H+M E +LI S CT HTC+TSC EFATHQ * CSHP DN QDGL
Sbjct: 400 APCKTEPGRLPNVHNMLEAQLIQSGCT*HTCSTSCLLEFATHQQ*TCSHPIVRDNEQDGL 579
Query: 598 FPECQHG 618
FPECQ G
Sbjct: 580 FPECQRG 600
Score = 109 bits (232), Expect(3) = 6e-030
Identities = 47/67 (70%), Positives = 55/67 (82%)
Frame = -1 / -2
Query: 617 PCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHVCQVHTLSINRSSCILCSSGSLP 438
P WHSGNKPSC LS ++G*EQ++ * VANS++QLVLHVC VH L IN +S ILC+ GSLP
Sbjct: 599 PRWHSGNKPSCSLSRTMG*EQVHC**VANSNKQLVLHVC*VHPLCINCASSILCTFGSLP 420
Query: 437 SSVLHGA 417
SVLHGA
Sbjct: 419 GSVLHGA 399
Score = 104 bits (221), Expect(2) = 1e-024
Identities = 48/79 (60%), Positives = 52/79 (65%)
Frame = -3 / -1
Query: 618 AMLAFREQAVLPIIMFCGMRTNLRLMGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPS 439
A LAFREQAVL II + GMRT+ LM CKL TTC TRM GA A YQ L H M IWQPS
Sbjct: 600 ATLAFREQAVLLIITYYGMRTSSLLMSCKL*QTTCATRMLGAPALYQLCLQHIMHIWQPS 421
Query: 438 ELGFTWSQIQVTADLWRAV 382
LGFTWS+ W+ V
Sbjct: 420 GLGFTWSRTPRIVGPWQVV 364
Score = 100 bits (212), Expect(2) = 2e-024
Identities = 48/79 (60%), Positives = 56/79 (70%)
Frame = +2 / +2
Query: 383 TARHRSAVTCIWLHVKPSSEGCQMSIVCRRND*Y*ACAPGIRVTQVVGESLQPISRKFVL 562
T H + + LHVKPS EGCQM I+C R++*Y A AP IRV QVV SLQ IS + VL
Sbjct: 365 TTCHGPTIRGVRLHVKPSPEGCQMCIICWRHN*YRAGAPSIRVAQVVC*SLQLISSELVL 544
Query: 563 IPQNMIMGRTACSLNASMA 619
IP +IM RTACSLNAS+A
Sbjct: 545 IP*YVIMSRTACSLNASVA 601
Score = 57.0 bits (118), Expect(2) = 4e-060
Identities = 24/34 (70%), Positives = 24/34 (70%)
Frame = -2 / -3
Query: 361 PPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
PP NVAVRPLPALKENVKRVMFYC*
Sbjct: 355 PPQGGRNNRAFGNVAVRPLPALKENVKRVMFYC* 254
Score = 49.2 bits (101), Expect(2) = 9e-039
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = +3 / +3
Query: 252 RQS*Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGG 362
R *Q*NMTRFTFS RAG GLTATF L+ GG
Sbjct: 246 RPP*Q*NMTRFTFSFRAGRGLTATFPNALLLRPPCGG 356
Score = 35.9 bits (72), Expect(2) = 3e-030
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1 / +1
Query: 256 NLSSRT*RASRFP*GQVMASQQHLQHQPWCCAPL 357
+L+S+T* ASRFP G+ A QQH Q +C P+
Sbjct: 250 HLNSKT*HASRFPSGRGGA*QQHSQTPCYCVHPV 351
Score = 35.0 bits (70), Expect(3) = 6e-030
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1 / -2
Query: 326 KCCCEAITCPQGKREARHV 270
+CCC+A P+GKREA HV
Sbjct: 320 ECCCQAPPRPEGKREACHV 264
Score = 32.7 bits (65), Expect(2) = 2e-024
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 266 VEHDALHVFLEGR*WPHSNI 325
V+HD LHVFL+G P SNI
Sbjct: 260 VKHDTLHVFLQGGEGPDSNI 319
Score = 29.0 bits (57), Expect(2) = 1e-024
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 330 LQMLL*GHYLPSRKT*SASCSTAKI 256
L MLL G P RKT*S SC T K+
Sbjct: 324 LGMLLSGPSPP*RKT*SVSCFTVKV 250
Score = 24.9 bits (48), Expect(3) = 6e-030
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1 / -2
Query: 371 PWPSTRGAQHQGWCCKCC 318
PWPST Q QG CC
Sbjct: 362 PWPSTGWTQ*QGVWECCC 309
>gb|BE196054.2|BE196054 HVSMEh0091D21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091D21f, mRNA sequence
Length = 914
Score = 230 bits (496), Expect = 1e-059
Identities = 98/127 (77%), Positives = 104/127 (81%)
Frame = -2 / +1
Query: 973 PKGGLSLVA*LGNLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 794
P+ G + LLISF RATGQKP+RIIFYRDGVSEGQFYQVL YELDAIRKACASLE
Sbjct: 157 PQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLRYELDAIRKACASLE 336
Query: 793 SDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSH 614
+YQPPVTFVVVQKRHHT+LF NNHNDQR DRSGNILPGT SKI HP EFDFYLCSH
Sbjct: 337 PNYQPPVTFVVVQKRHHTKLFANNHNDQRTGDRSGNILPGTGGGSKIWHPNEFDFYLCSH 516
Query: 613 AGIQGTS 593
A I+ S
Sbjct: 517 ACIKEQS 537
Score = 168 bits (361), Expect(2) = 5e-043
Identities = 72/115 (62%), Positives = 78/115 (67%)
Frame = +1 / -2
Query: 589 DGLFPECQHGCTGRNQTRLDGKSLSPPQCPAVCCHFYRQHADHCDY*QTTWCDDASGPRQ 768
+G P C+ G T RNQTR D KSL+ QC AVC FY Q+ DHC Y*Q WCD ASG Q
Sbjct: 541 EGFVP*CKRGYTSRNQTRSDAKSLNHHQCQAVCFRFYHQYVDHCGY*QKAWCDAASGQLQ 362
Query: 769 K*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HHPCRI*SSWVFVQSPSRKK*E 933
K*L AGN P H PF*WHQV T EL RT P *HHPC+I* S V V+ PS KK*E
Sbjct: 361 K*LGAGNWAPRTHMPF*WHQVHTEELDRTGPR*HHPCKI*FSGVSVRLPS*KK*E 197
Score = 162 bits (348), Expect = 3e-039
Identities = 78/115 (67%), Positives = 90/115 (78%)
Frame = +2 / -3
Query: 593 ACSLNASMAAQVEIKLGWMANL*VHHSARQYVATSIGSTLIIVIINKQPGVMTLLDHDKS 772
A LNAS+A QVEIKL M NL* SARQYV+ SI STLIIV+I+K+ GVM LLD+ KS
Sbjct: 537 ALFLNASVATQVEIKLVRMPNL*TTTSARQYVSASITSTLIIVVISKKLGVMPLLDNYKS 358
Query: 773 NWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIPVEYDPLGFLSSRPPERNEKV 937
NW LVI LQ T LSNGIKF+ +NL+EL+L DTIPV+YD LGFLS P ERNEK+
Sbjct: 357 NWGLVIGLQGRTCLSNGIKFIPKNLIELALADTIPVKYDSLGFLSGCPLERNEKL 193
Score = 154 bits (331), Expect(2) = 6e-041
Identities = 73/115 (63%), Positives = 81/115 (70%)
Frame = -1 / +3
Query: 932 SHFFLEGDWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPE 753
SHFF EG+ T+T E+HILQGWCQ G VL SS V T*CH*KG+C++G LPA SYFC PE
Sbjct: 198 SHFFQEGNRTETPENHILQGWCQRGPVLSSSSV*T*CH*KGMCVLGAQLPAPSYFCSCPE 377
Query: 752 ASSHQVVC**SQ*SACCR*KWQHTAGHCGGLKDLPSNRV*FLPVQPCWHSGNKPS 588
A+SHQ C** Q*S *K +HTA H KDL S RV*FL V P H G KPS
Sbjct: 378 AASHQAFC**PQ*STYW**KRKHTAWHWWWFKDLASERV*FLLV*PRLH*GTKPS 542
Score = 152 bits (326), Expect = 3e-036
Identities = 75/121 (61%), Positives = 84/121 (69%)
Frame = -3 / +2
Query: 936 TFSFLSGGRLDKNPRGSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSWS 757
+FSFLS G+ D+NPR SY TGMVS R SS KF NLMPLER V WS ITS QLLL S
Sbjct: 194 SFSFLSRGQPDRNPRESYFTGMVSARASSIKFFGMNLMPLERHVRPWSPITSPQLLL*LS 373
Query: 756 RSVITPGCLLIITMISVLPIEVATYCRALWWTQRFAIQPSLISTCAAMLAFREQAVLPII 577
RS ITP LLI TMI+VL IE TYC AL QRF I+ SLISTC A LA R +A ++
Sbjct: 374 RSGITPSFLLITTMINVLVIEAETYCLALVVVQRFGIRTSLISTCVATLALRNKAFCVLL 553
Query: 576 M 574
+
Sbjct: 554 L 556
Score = 117 bits (251), Expect(2) = 8e-035
Identities = 54/64 (84%), Positives = 54/64 (84%)
Frame = +3 / -1
Query: 741 V**RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQ 920
V* RFWTTTKVTGGW* S DA AFLMASSSY RT *N PSLTPSL*NMIL GFCPVAL
Sbjct: 389 V*CRFWTTTKVTGGW*LGSKDAHAFLMASSSYRRT**NWPSLTPSL*NMILWGFCPVALL 210
Query: 921 KEMR 932
KEMR
Sbjct: 209 KEMR 198
Score = 49.6 bits (102), Expect(2) = 8e-035
Identities = 22/32 (68%), Positives = 23/32 (71%)
Frame = +3 / -1
Query: 591 RLVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 686
RL M AWLH+*KSNS G QIFE VPGSM
Sbjct: 539 RLCSLMQAWLHK*KSNSFGCQIFEPPPVPGSM 444
Score = 33.6 bits (67), Expect(2) = 6e-041
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -1 / +1
Query: 977 DPQRGTVSGGMIRE 936
DPQRGTV+GGMI+E
Sbjct: 154 DPQRGTVTGGMIKE 195
Score = 26.7 bits (52), Expect(2) = 5e-043
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / -2
Query: 932 KVP*SCHQRQSPFGD 976
+ P*SCHQ Q FGD
Sbjct: 199 EAP*SCHQSQFLFGD 155
>gb|BJ457634.1|BJ457634 BJ457634 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak28j10 3', mRNA sequence
Length = 463
Score = 184 bits (396), Expect(2) = 7e-049
Identities = 74/84 (88%), Positives = 75/84 (89%)
Frame = -2 / -2
Query: 586 AHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTS 407
AHYHVLWDEN FTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTS
Sbjct: 462 AHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTS 283
Query: 406 DSGSVASGATTSRGPPPGARNTRA 335
D GSVASGATT RGP +RA
Sbjct: 282 DGGSVASGATTGRGPTGARGGSRA 211
Score = 102 bits (217), Expect(2) = 1e-030
Identities = 49/71 (69%), Positives = 51/71 (71%)
Frame = +3 / +2
Query: 363 GPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNP 542
GPR VVAPLAT+P S VSGSM*N GGTIDTERVHLA V*H+L VRVC P
Sbjct: 239 GPRPVVAPLATEPPSEVSGSM*NRARKAAR*A*YAGGTIDTERVHLA*V*HRLFVRVCKP 418
Query: 543 SAVNLFSSHRT 575
SAV LFSS RT
Sbjct: 419 SAVKLFSSQRT 451
Score = 51.0 bits (105), Expect(2) = 1e-030
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = +3 / +2
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGG 362
Q*NMTRFTF LR+G GLTATF A L RAP G
Sbjct: 143 Q*NMTRFTF*LRSGRGLTATFPAALLPPRAPVG 241
Score = 30.4 bits (60), Expect(2) = 7e-049
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1 / -1
Query: 332 CCKCCCEAITCPQGKREARHV 270
C +CCC A PQ KRE HV
Sbjct: 211 CRECCC*ASA*PQLKRETCHV 149
>gb|BU973725.1|BU973725 HB25M17r BC Hordeum vulgare subsp. vulgare cDNA clone HB25M17
5-PRIME, mRNA sequence
Length = 506
Score = 183 bits (394), Expect = 1e-045
Identities = 73/99 (73%), Positives = 77/99 (77%)
Frame = -2 / +1
Query: 646 PTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPP 467
PTEFDFYLCSHAGIQGTSRP HYHVL+DEN FTADGLQ LTNNLCYTYARCTRSVS+VPP
Sbjct: 13 PTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQLTNNLCYTYARCTRSVSVVPP 192
Query: 466 AYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPPGA 350
AYYAHLAAFRAR+Y EP + T GA
Sbjct: 193 AYYAHLAAFRARYYDEPSEGSDSASIVSGGTRESAATGA 309
Score = 78.5 bits (165), Expect(2) = 9e-021
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = -1 / +3
Query: 647 SNRV*FLPVQPCWHSGNKPSCPLSCSVG*EQIYG*WVANSHQQLVLHVCQVHTLSINRSS 468
S+RV*FLPV PC +SG+K + L C + *++ + W A +HQQ VLH+ +H+L + SS
Sbjct: 12 SHRV*FLPV*PCRYSGHKQTNSLPCPLR*KRFHCRWAAAAHQQPVLHIRSMHSLCLCCSS 191
Query: 467 CILCSSGSLPSSVL 426
C+L S G +P +VL
Sbjct: 192 CLLRSPGCVPRTVL 233
Score = 41.8 bits (85), Expect(2) = 9e-021
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -2 / +1
Query: 415 DTSDSGSVASGATTSRGPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC* 260
D GS ++ + A A A RPLP +++NVK VMFYC*
Sbjct: 235 DEPSEGSDSASIVSGGTRESAATGAGAAGPPAAFRPLPRIRDNVKEVMFYC* 390
>gb|CA028206.1|CA028206 HZ61F01r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61F01
5-PRIME, mRNA sequence
Length = 468
Score = 133 bits (286), Expect(2) = 2e-044
Identities = 55/56 (98%), Positives = 55/56 (98%)
Frame = -2 / +1
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 380
AD LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA
Sbjct: 1 ADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 168
Score = 91.8 bits (194), Expect(2) = 2e-029
Identities = 37/55 (67%), Positives = 41/55 (74%)
Frame = +1 / -3
Query: 382 HRSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSCW*EFATHQ 546
HRSP+ RC APC+TE GRLPD HSMQEE+ I S C HTC+T C *EFATHQ
Sbjct: 166 HRSPRTRCRRCPAPCRTEPGRLPDGHSMQEEQSIQSGCIEHTCSTGCL*EFATHQ 2
Score = 86.3 bits (182), Expect(2) = 5e-021
Identities = 37/55 (67%), Positives = 39/55 (70%)
Frame = -3 / +2
Query: 546 LMGCKLSPTTCVTRMPGAHAQYQSFLLHTMLIWQPSELGFTWSQIQVTADLWRAV 382
LM CKLS TTC TRM A A Y+ FLLHTM IWQPS LG TWS+ TA WRAV
Sbjct: 2 LMSCKLSQTTCATRMLDAPALYRLFLLHTMPIWQPSGLGSTWSRTPPTAGPWRAV 166
Score = 65.7 bits (137), Expect(2) = 2e-044
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -2 / +1
Query: 367 GPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC*D*R 251
GPP G + NVAVRPLPALKENVKRVMFYC*D R
Sbjct: 175 GPPQGGPRSSTRFGNVAVRPLPALKENVKRVMFYC*DPR 291
Score = 57.9 bits (120), Expect(2) = 2e-029
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = +3 / -2
Query: 207 HHHHNDNCLLTASAQRQS*Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGP 368
H + + +T+ R S*Q*NMTR TFSLRAG GLTATF L+ P GGP
Sbjct: 335 HQYDSQVLQVTSR*LRGS*Q*NMTRLTFSLRAGRGLTATFPNLVLLRGPPCGGP 174
Score = 35.0 bits (70), Expect(2) = 5e-021
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1 / +3
Query: 362 STRGAQHQGWCCKCCCEAITCPQGKREARHV 270
ST + Q + CC+A PQGKR+ARHV
Sbjct: 180 STGRSTQQHQVWERCCQASPRPQGKRQARHV 272
>gb|BJ458585.1|BJ458585 BJ458585 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak32j21 3', mRNA sequence
Length = 614
Score = 155 bits (334), Expect(2) = 9e-042
Identities = 65/76 (85%), Positives = 66/76 (86%)
Frame = -2 / -2
Query: 562 ENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
EN FTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME DTSD GSVASG
Sbjct: 613 ENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMELDTSDGGSVASG 434
Query: 382 ATTSRGPPPGARNTRA 335
ATT RGP +RA
Sbjct: 433 ATTGRGPTGARGGSRA 386
Score = 93.2 bits (197), Expect(2) = 6e-029
Identities = 45/67 (67%), Positives = 47/67 (70%)
Frame = +3 / +3
Query: 363 GPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNP 542
GPR VVAPLAT+P S VS SM*N GGTIDTERVHLA V*H+L VRVC P
Sbjct: 414 GPRPVVAPLATEPPSEVSSSM*NRARKAAR*A*YAGGTIDTERVHLA*V*HRLFVRVCKP 593
Query: 543 SAVNLFS 563
SAV LFS
Sbjct: 594 SAVKLFS 614
Score = 54.7 bits (113), Expect(2) = 6e-029
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +3 / +3
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGG 362
Q*NMTRFTFSLR+G GLTATF A L RAP G
Sbjct: 318 Q*NMTRFTFSLRSGRGLTATFPAALLPPRAPVG 416
Score = 35.0 bits (70), Expect(2) = 9e-042
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -1 / -1
Query: 332 CCKCCCEAITCPQGKREARHV 270
C +CCC A PQGKRE HV
Sbjct: 386 CRECCC*ASA*PQGKRETCHV 324
>gb|BJ450210.1|BJ450210 BJ450210 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak28j10 5', mRNA sequence
Length = 507
Score = 155 bits (333), Expect(2) = 1e-041
Identities = 64/73 (87%), Positives = 65/73 (89%)
Frame = -2 / +3
Query: 553 FTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATT 374
FTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSD GSVASGATT
Sbjct: 21 FTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDGGSVASGATT 200
Query: 373 SRGPPPGARNTRA 335
RGP +RA
Sbjct: 201 GRGPTGARGGSRA 239
Score = 89.5 bits (189), Expect(2) = 7e-028
Identities = 43/63 (68%), Positives = 45/63 (71%)
Frame = +3 / -3
Query: 363 GPRLVVAPLATDPLSLVSGSM*NXXXXXXXXXXXXGGTIDTERVHLAYV*HKLLVRVCNP 542
GPR VVAPLAT+P S VSGSM*N GGTIDTERVHLA V*H+L VRVC P
Sbjct: 211 GPRPVVAPLATEPPSEVSGSM*NRARKAAR*A*YAGGTIDTERVHLA*V*HRLFVRVCKP 32
Query: 543 SAV 551
SAV
Sbjct: 31 SAV 23
Score = 54.7 bits (113), Expect(2) = 7e-028
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +3 / -3
Query: 264 Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGG 362
Q*NMTRFTFSLR+G GLTATF A L RAP G
Sbjct: 307 Q*NMTRFTFSLRSGRGLTATFPAALLPPRAPVG 209
Score = 35.0 bits (70), Expect(2) = 1e-041
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -1 / +2
Query: 332 CCKCCCEAITCPQGKREARHV 270
C +CCC A PQGKRE HV
Sbjct: 239 CRECCC*ASA*PQGKRETCHV 301
>gb|BG417425.2|BG417425 HVSMEk0017E11f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0017E11f, mRNA sequence
Length = 689
Score = 168 bits (362), Expect = 4e-041
Identities = 71/88 (80%), Positives = 76/88 (86%)
Frame = -2 / +1
Query: 973 PKGGLSLVA*LGNLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 794
P+ G + LLISF RATGQKP+RIIFYRDGVSEGQFYQVLL+ELDAIRKACASLE
Sbjct: 424 PQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLE 603
Query: 793 SDYQPPVTFVVVQKRHHTRLFVNNHNDQ 710
+YQPPVTFVVVQKRHHTRLF NNHNDQ
Sbjct: 604 PNYQPPVTFVVVQKRHHTRLFANNHNDQ 687
Score = 125 bits (268), Expect(2) = 3e-032
Identities = 55/76 (72%), Positives = 63/76 (82%)
Frame = +2 / -3
Query: 710 LIIVIINKQPGVMTLLDHDKSNWRLVIRLQ*CTGLSNGIKFVQQNLVELSLTDTIPVEYD 889
LIIVI++K+P V+TLLD+ KSNWRL+I LQ CTGL NGIKF QQNLVELSL DTIPV+YD
Sbjct: 687 LIIVIVSKKPSVVTLLDNHKSNWRLIIWLQGCTGLPNGIKFKQQNLVELSLADTIPVKYD 508
Query: 890 PLGFLSSRPPERNEKV 937
L FL S P ER EK+
Sbjct: 507 SLRFLPSCPLERYEKL 460
Score = 123 bits (263), Expect(2) = 1e-031
Identities = 53/75 (70%), Positives = 58/75 (77%)
Frame = -1 / +3
Query: 932 SHFFLEGDWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYFCRGPE 753
SH F EG+W +T E+HILQGWCQ GTVLPSSVV T*CH*+GLCI+G L SSYFC PE
Sbjct: 465 SHIFQEGNWAETSENHILQGWCQRGTVLPSSVV*T*CH*EGLCILGAKLSTSSYFCGCPE 644
Query: 752 ASSHQVVC**SQ*SA 708
AS H C* SQ*SA
Sbjct: 645 ASPH*AFC*QSQ*SA 689
Score = 121 bits (259), Expect(2) = 5e-028
Identities = 54/62 (87%), Positives = 55/62 (88%)
Frame = +3 / -1
Query: 747 *RFWTTTKVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKE 926
*RFWTTTKVTGG * S DAQAFLMASSS NRTW*NCPSLTPSL*NMIL GFCPVAL K+
Sbjct: 650 *RFWTTTKVTGG**FGSKDAQAFLMASSSNNRTW*NCPSLTPSL*NMIL*GFCPVALLKD 471
Query: 927 MR 932
MR
Sbjct: 470 MR 465
Score = 118 bits (253), Expect(2) = 3e-027
Identities = 54/76 (71%), Positives = 59/76 (77%)
Frame = -3 / +2
Query: 936 TFSFLSGGRLDKNPRGSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLLLSWS 757
+FS+LS G+L +N R SY TGMVS RDSSTKFCC NLMPL RPVH WS I +LQLLL S
Sbjct: 461 SFSYLSRGQLGRNLRESYFTGMVSARDSSTKFCCLNLMPLGRPVHPWSQIINLQLLLWLS 640
Query: 756 RSVITPGCLLIITMIS 709
RSV T G LL ITMIS
Sbjct: 641 RSVTTLGFLLTITMIS 688
Score = 114 bits (244), Expect = 7e-025
Identities = 52/75 (69%), Positives = 54/75 (72%)
Frame = +1 / -2
Query: 709 ADHCDY*QTTWCDDASGPRQK*LEAGNQTPMMHRPF*WHQVRTTELGRTVPH*HHPCRI* 888
ADHCD *Q C DASG QK*LE N P MHRP *WHQV+TTELGRTVP *HHPC+I*
Sbjct: 688 ADHCDC*QKA*CGDASGQPQK*LEVDNLAPRMHRPS*WHQVQTTELGRTVPR*HHPCKI* 509
Query: 889 SSWVFVQSPSRKK*E 933
S V Q PS K *E
Sbjct: 508 FSEVSAQLPS*KI*E 464
Score = 33.6 bits (67), Expect(2) = 1e-031
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -1 / +1
Query: 977 DPQRGTVSGGMIRE 936
DPQRGTV+GGMI+E
Sbjct: 421 DPQRGTVTGGMIKE 462
Score = 33.1 bits (66), Expect(2) = 3e-032
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 937 SLIMPPETVPLWG 975
SLIMPP TVPLWG
Sbjct: 461 SLIMPPVTVPLWG 423
Score = 23.5 bits (45), Expect(2) = 3e-027
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3 / +3
Query: 975 SPKGDCLWWHD*GTFSFLSGG 913
SPK +C W HD G G
Sbjct: 423 SPKRNCDWRHDQGASHIFQEG 485
Score = 23.1 bits (44), Expect(2) = 5e-028
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2 / -2
Query: 932 KVP*SCHQRQSPFGD 976
+ P*SC Q Q FGD
Sbjct: 466 EAP*SCRQSQFLFGD 422
>gb|CK122310.1|CK122310 BES1824102n07 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N072 5-PRIME, mRNA sequence
Length = 614
Score = 119 bits (255), Expect(3) = 2e-040
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -2 / +2
Query: 523 NNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 380
NNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA
Sbjct: 2 NNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGA 145
Score = 77.1 bits (162), Expect(2) = 4e-025
Identities = 30/47 (63%), Positives = 34/47 (72%)
Frame = +1 / -1
Query: 382 HRSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHTCNTSC 522
HRSP+ RC APC+TE GRLPD HSMQEE+ I S C HTC+T C
Sbjct: 143 HRSPRTRCRRCPAPCRTEPGRLPDGHSMQEEQSIQSGCIEHTCSTGC 3
Score = 65.7 bits (137), Expect(3) = 2e-040
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = -2 / +2
Query: 367 GPPPGARNTRAGAANVAVRPLPALKENVKRVMFYC*D*R 251
GPP G + NVAVRPLPALKENVKRVMFYC*D R
Sbjct: 152 GPPQGGPRSSTRFGNVAVRPLPALKENVKRVMFYC*DPR 268
Score = 57.9 bits (120), Expect(2) = 4e-025
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = +3 / -3
Query: 207 HHHHNDNCLLTASAQRQS*Q*NMTRFTFSLRAGNGLTATFAAPALVLRAPGGGP 368
H + + +T+ R S*Q*NMTR TFSLRAG GLTATF L+ P GGP
Sbjct: 312 HQYDSQVLQVTSR*LRGS*Q*NMTRLTFSLRAGRGLTATFPNLVLLRGPPCGGP 151
Score = 22.6 bits (43), Expect(3) = 2e-040
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3 / +3
Query: 132 CDILLLRWACR 100
C+ LLL W CR
Sbjct: 486 CEKLLLSWLCR 518
>emb|AJ234606.1|HVU234606 Hordeum vulgare genomic DNA fragment; clone MWG0876.uni
Length = 486
Score = 92.7 bits (196), Expect(4) = 6e-036
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = -2 / -2
Query: 565 DENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTS 407
DENKF +D +Q L +NLCYT+ RCTR VS+VPPAYYAHLAA+R R Y+E S
Sbjct: 311 DENKFQSDEVQQLIHNLCYTFVRCTRPVSLVPPAYYAHLAAYRGRLYLERSDS 153
Score = 49.2 bits (101), Expect(4) = 6e-036
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = -2 / -1
Query: 688 NILPGTVVDSKICHPTEFDFYLCSH 614
NI PGTVVD+ I H EFDFYLCSH
Sbjct: 432 NIPPGTVVDTVITHXREFDFYLCSH 358
Score = 33.1 bits (66), Expect(4) = 6e-036
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -2 / -2
Query: 310 PLPALKENVKRVMFYC* 260
PLP L ++VKR+MFYC*
Sbjct: 101 PLPKLTDSVKRLMFYC* 51
Score = 31.8 bits (63), Expect(4) = 6e-036
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2 / -3
Query: 610 GIQGTSRPAHYHVL 569
G +GTSRP HYH+L
Sbjct: 355 GTKGTSRPTHYHIL 314
>gb|BG415324.2|BG415324 HVSMEk0006A22f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0006A22f, mRNA sequence
Length = 639
Score = 146 bits (314), Expect = 2e-034
Identities = 57/116 (49%), Positives = 78/116 (67%)
Frame = -2 / +2
Query: 697 RSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNN 518
++GN+LPGTVVD++I P +DFYLCSH G+ GTSRP HY+ L DE+ + +D LQ L N
Sbjct: 2 KNGNVLPGTVVDTRIVDPVTYDFYLCSHNGLIGTSRPTHYYNLMDEHGYGSDDLQRLVYN 181
Query: 517 LCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPPGA 350
LC+ +ARCT+ VS+ P YYA LAA+R R Y E + V S ++++ GA
Sbjct: 182 LCFVFARCTKPVSLATPVYYADLAAYRGRLYYEGMLASQPQVRSSSSSASSTAAGA 349
>gb|BQ462861.1|BQ462861 HI02D22r HI Hordeum vulgare subsp. vulgare cDNA clone HI02D22
5-PRIME, mRNA sequence
Length = 615
Score = 128 bits (274), Expect(2) = 2e-034
Identities = 56/119 (47%), Positives = 73/119 (61%)
Frame = -2 / +1
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H AD N+ GTVVDS I HP ++DFY+C+HAG GTSRP HYHVL D+ FT
Sbjct: 100 NHHTKLFQADAPDNVPAGTVVDSGIVHPKQYDFYMCAHAGPIGTSRPTHYHVLLDQIGFT 279
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTS 371
D LQ L +L Y Y R T ++S+V P YAHLAA + +++ + S SG +S
Sbjct: 280 PDELQKLVLSLSYVYQRSTTAISVVAPICYAHLAAAQMSQFIKFEEFADTSSGSGVPSS 456
Score = 37.7 bits (76), Expect(2) = 2e-034
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2 / +1
Query: 832 ELDAIRKACASLESDYQPPVTFVVVQKRHHTRLF 731
E+D I KA ++ P +T ++ QK HHT+LF
Sbjct: 19 EVDQIIKAYQNMGQGPPPKITVIIAQKNHHTKLF 120
>gb|BQ663666.1|BQ663666 HU03I11u HU Hordeum vulgare subsp. vulgare cDNA clone HU03I11
3-PRIME, mRNA sequence
Length = 562
Score = 78.5 bits (165), Expect(3) = 1e-033
Identities = 35/42 (83%), Positives = 35/42 (83%)
Frame = -2 / -1
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
T AR RSVSIVPPAYYAHLAAF ARFY E DTSDSGSVA G
Sbjct: 397 TNARRIRSVSIVPPAYYAHLAAFWARFYTETDTSDSGSVACG 272
Score = 52.4 bits (108), Expect(3) = 1e-033
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -2 / -2
Query: 583 HYHVLWDENKFTADGLQTLTNNLCYT 506
HY VLW+ENKFTAD LQT NN CYT
Sbjct: 477 HYLVLWNENKFTADELQTPKNNSCYT 400
Score = 51.0 bits (105), Expect(3) = 1e-033
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = -2 / -1
Query: 667 VDSKICHPTEFDFYLCSHAGIQGTSRPA 584
+DSKI H EFD Y+C++AGIQGTS+PA
Sbjct: 562 IDSKIYHLMEFDCYICTNAGIQGTSQPA 479
Score = 50.6 bits (104), Expect(3) = 9e-022
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = +1 / +3
Query: 505 TCNTSCW*EFATHQP*ICSHPTEHDNGQDGLFP 603
TC+TSC+ EFATHQ *ICS TE DN L P
Sbjct: 399 TCSTSCFWEFATHQR*ICSRSTEQDNEAGWLVP 497
Score = 48.7 bits (100), Expect(3) = 8e-021
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -1 / -3
Query: 503 CQVHTLSINRSSCILCSSGSLPSSVLHGARY 411
C H L I+RSS ILC+SGSL S+LHG RY
Sbjct: 392 C*AHPLCIDRSSSILCTSGSLLGSILHGDRY 300
Score = 47.3 bits (97), Expect(3) = 9e-022
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +1 / +1
Query: 385 RSPQIRCHLYLAPCKTELGRLPDEHSMQEERLILSVCTWHT 507
R + R YL+PCK E RLPD H+M EER I S C H+
Sbjct: 274 RKQRTRYPRYLSPCKIEPKRLPDVHNMLEERSIQSGCA*HS 396
Score = 45.1 bits (92), Expect(3) = 8e-021
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -1 / -3
Query: 659 KDLPSNRV*FLPVQPCWHSGNKPSC 585
+DLPS+ +* L + CWHSGNKP+C
Sbjct: 554 EDLPSDGI*LLHMYQCWHSGNKPAC 480
Score = 44.1 bits (90), Expect(3) = 8e-021
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -3 / -3
Query: 582 IIMFCGMRTNLRLMGCKLSPTTCVTR 505
II+FCG RTNL LM CKL TT TR
Sbjct: 476 IILFCGTRTNLPLMSCKLPKTTRATR 399
Score = 43.2 bits (88), Expect(3) = 9e-022
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3 / +3
Query: 585 AGRLVP*MPAWLHR*KSNSVGWQIFES 665
AG LVP*MPA +H *+SNS+ W IFES
Sbjct: 480 AGWLVP*MPALVHM*QSNSIRW*IFES 560
>emb|AJ234870.1|HVU234870 Hordeum vulgare genomic DNA fragment; clone MWG2264
Length = 447
Score = 87.2 bits (184), Expect(3) = 5e-033
Identities = 32/44 (72%), Positives = 39/44 (88%)
Frame = -2 / +1
Query: 814 KACASLESDYQPPVTFVVVQKRHHTRLFVNNHNDQRAADRSGNI 683
+ACASLE +YQPPVTFV+VQKRHHT+LF NNHND+ + D+S NI
Sbjct: 142 QACASLEPNYQPPVTFVIVQKRHHTKLFANNHNDKSSTDKSRNI 273
Score = 46.4 bits (95), Expect(3) = 5e-033
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -2 / +2
Query: 874 DGVSEGQFYQVLLYELDAIRK 812
DGVS GQF+QVLLYELDAIRK
Sbjct: 2 DGVSAGQFHQVLLYELDAIRK 64
Score = 46.0 bits (94), Expect(3) = 5e-033
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -2 / +2
Query: 676 GTVVDSKICHPTEFDFY 626
GTVVDSKICHPT+FDFY
Sbjct: 395 GTVVDSKICHPTQFDFY 445
>gb|BE195976.3|BE195976 HVSMEh0091A07f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091A07f, mRNA sequence
Length = 1009
Score = 133 bits (284), Expect = 2e-030
Identities = 53/115 (46%), Positives = 72/115 (62%)
Frame = -2 / +1
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H + N+ PGTVVD ++CHP FDFY+C+HAG+ GTSRP HYHVL DE F+
Sbjct: 133 NHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFS 312
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
AD LQ ++L Y Y R T ++S+ P YAHLAA + +M+ + S + G
Sbjct: 313 ADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDMSDTSSSQG 477
>gb|BU969384.1|BU969384 HB11G01r BC Hordeum vulgare subsp. vulgare cDNA clone HB11G01
5-PRIME, mRNA sequence
Length = 548
Score = 133 bits (284), Expect = 2e-030
Identities = 52/115 (45%), Positives = 72/115 (62%)
Frame = -2 / +3
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE F
Sbjct: 24 NHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFA 203
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
AD LQ L ++L Y Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 204 ADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQG 368
>gb|BU975642.1|BU975642 HB31N05r BC Hordeum vulgare subsp. vulgare cDNA clone HB31N05
5-PRIME, mRNA sequence
Length = 617
Score = 133 bits (284), Expect = 2e-030
Identities = 53/115 (46%), Positives = 72/115 (62%)
Frame = -2 / +2
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H + N+ PGTVVD ++CHP FDFY+C+HAG+ GTSRP HYHVL DE F+
Sbjct: 77 NHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFS 256
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
AD LQ ++L Y Y R T ++S+ P YAHLAA + +M+ + S + G
Sbjct: 257 ADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDMSDTSSSQG 421
>gb|BU985772.1|BU985772 HF08J07r HF Hordeum vulgare subsp. vulgare cDNA clone HF08J07
5-PRIME, mRNA sequence
Length = 493
Score = 133 bits (284), Expect = 2e-030
Identities = 53/115 (46%), Positives = 72/115 (62%)
Frame = -2 / +1
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H + N+ PGTVVD ++CHP FDFY+C+HAG+ GTSRP HYHVL DE F+
Sbjct: 109 NHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFS 288
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
AD LQ ++L Y Y R T ++S+ P YAHLAA + +M+ + S + G
Sbjct: 289 ADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDMSDTSSSQG 453
>gb|CA031166.1|CA031166 HX09D06r HX Hordeum vulgare subsp. vulgare cDNA clone HX09D06
5-PRIME, mRNA sequence
Length = 647
Score = 133 bits (284), Expect = 2e-030
Identities = 52/115 (45%), Positives = 72/115 (62%)
Frame = -2 / +1
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE F
Sbjct: 61 NHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFA 240
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
AD LQ L ++L Y Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 241 ADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQG 405
>gb|CB876456.1|CB876456 HX11F07w HX Hordeum vulgare subsp. vulgare cDNA clone HX11F07
3-PRIME, mRNA sequence
Length = 641
Score = 133 bits (284), Expect = 2e-030
Identities = 52/115 (45%), Positives = 72/115 (62%)
Frame = -2 / -2
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE F
Sbjct: 619 NHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFA 440
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
AD LQ L ++L Y Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 439 ADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQG 275
>gb|AV918127.1|AV918127 AV918127 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17p11 3', mRNA sequence
Length = 702
Score = 132 bits (282), Expect = 4e-030
Identities = 50/102 (49%), Positives = 69/102 (67%)
Frame = -2 / -3
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCY 509
N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE F AD LQ L ++L Y
Sbjct: 679 NVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSY 500
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 499 VYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQG 374
>gb|AV918379.1|AV918379 AV918379 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20n15 3', mRNA sequence
Length = 662
Score = 132 bits (282), Expect = 4e-030
Identities = 50/102 (49%), Positives = 69/102 (67%)
Frame = -2 / -2
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCY 509
N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE F AD LQ L ++L Y
Sbjct: 637 NVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSY 458
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 457 VYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQG 332
>gb|BU971417.1|BU971417 HB17I20r BC Hordeum vulgare subsp. vulgare cDNA clone HB17I20
5-PRIME, mRNA sequence
Length = 502
Score = 132 bits (282), Expect = 4e-030
Identities = 50/102 (49%), Positives = 69/102 (67%)
Frame = -2 / +2
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCY 509
N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE F AD LQ L ++L Y
Sbjct: 38 NVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSY 217
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 218 VYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQG 343
>gb|CB874380.1|CB874380 HX05B15w HX Hordeum vulgare subsp. vulgare cDNA clone HX05B15
3-PRIME, mRNA sequence
Length = 626
Score = 132 bits (282), Expect = 4e-030
Identities = 50/102 (49%), Positives = 69/102 (67%)
Frame = -2 / -1
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCY 509
N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE F AD LQ L ++L Y
Sbjct: 623 NVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSY 444
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 443 VYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQG 318
>gb|CB875735.1|CB875735 HX09D06w HX Hordeum vulgare subsp. vulgare cDNA clone HX09D06
3-PRIME, mRNA sequence
Length = 674
Score = 132 bits (282), Expect = 4e-030
Identities = 50/102 (49%), Positives = 69/102 (67%)
Frame = -2 / -1
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCY 509
N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE F AD LQ L ++L Y
Sbjct: 671 NVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSY 492
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 491 VYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQG 366
>gb|CB875995.1|CB875995 HX09P10w HX Hordeum vulgare subsp. vulgare cDNA clone HX09P10
3-PRIME, mRNA sequence
Length = 626
Score = 132 bits (282), Expect = 4e-030
Identities = 50/102 (49%), Positives = 69/102 (67%)
Frame = -2 / -1
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCY 509
N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE F AD LQ L ++L Y
Sbjct: 623 NVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSY 444
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 443 VYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQG 318
>gb|BU974279.1|BU974279 HB27H05r BC Hordeum vulgare subsp. vulgare cDNA clone HB27H05
5-PRIME, mRNA sequence
Length = 461
Score = 131 bits (281), Expect = 5e-030
Identities = 51/103 (49%), Positives = 68/103 (66%)
Frame = -2 / +1
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H + N+ PGTVVD ++CHP FDFY+C+HAG+ GTSRP HYHVL DE F+
Sbjct: 124 NHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFS 303
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 419
AD LQ ++L Y Y R T ++S+ P YAHLAA + +M+
Sbjct: 304 ADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMK 432
>gb|BF629097.2|BF629097 HVSMEb0009N21f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009N21f, mRNA sequence
Length = 727
Score = 131 bits (280), Expect = 7e-030
Identities = 52/115 (45%), Positives = 71/115 (61%)
Frame = -2 / +2
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H + N+ PGTVVD ++CHP FDFY+C+HAG+ GTSRP HYHVL DE F+
Sbjct: 296 NHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFS 475
Query: 547 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
AD LQ ++L Y Y R T ++S+ P YAH+AA +M+ + S + G
Sbjct: 476 ADELQEFVHSLSYVYQRSTTAISVAAPIAYAHMAAAHVGTFMKFEDMSDTSSSHG 640
>gb|CB859263.1|CB859263 HI09O13w HI Hordeum vulgare subsp. vulgare cDNA clone HI09O13
3-PRIME, mRNA sequence
Length = 544
Score = 130 bits (279), Expect = 1e-029
Identities = 52/108 (48%), Positives = 70/108 (64%)
Frame = -2 / -2
Query: 673 TVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARC 494
TVVD++I P +DFYLCSH G+ GTSRP HY+ L DE+ + +D LQ L NLC+ +ARC
Sbjct: 543 TVVDTRIVDPVTYDFYLCSHNGLIGTSRPTHYYNLMDEHGYGSDDLQRLVYNLCFVFARC 364
Query: 493 TRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGATTSRGPPPGA 350
T+ VS+ P YYA LAA+R R Y E + V S ++++ GA
Sbjct: 363 TKPVSLATPVYYADLAAYRGRLYYEGMLASQPQVRSSSSSASSTAAGA 220
>gb|AV918025.1|AV918025 AV918025 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17h21 3', mRNA sequence
Length = 653
Score = 129 bits (276), Expect = 3e-029
Identities = 49/99 (49%), Positives = 67/99 (67%)
Frame = -2 / -2
Query: 679 PGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYA 500
PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE F AD LQ L ++L Y Y
Sbjct: 652 PGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSYVYQ 473
Query: 499 RCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 472 RSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQG 356
>gb|CB876294.1|CB876294 HX10N18w HX Hordeum vulgare subsp. vulgare cDNA clone HX10N18
3-PRIME, mRNA sequence
Length = 676
Score = 129 bits (276), Expect = 3e-029
Identities = 49/102 (48%), Positives = 68/102 (66%)
Frame = -2 / -1
Query: 688 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCY 509
N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+ P HYH+L DE F AD LQ L ++L Y
Sbjct: 670 NVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTXPTHYHILHDEIHFAADDLQDLVHSLSY 491
Query: 508 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 383
Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 490 VYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQG 365
>gb|BU975928.1|BU975928 HB32L19r BC Hordeum vulgare subsp. vulgare cDNA clone HB32L19
5-PRIME, mRNA sequence
Length = 456
Score = 120 bits (256), Expect = 2e-026
Identities = 52/68 (76%), Positives = 57/68 (83%)
Frame = -2 / +2
Query: 973 PKGGLSLVA*LGNLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 794
P+ G + LLISF RATGQKP+RIIFYRDGVSEGQFYQVLL+ELDAIRKACASLE
Sbjct: 251 PQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLE 430
Query: 793 SDYQPPVT 770
+YQPPVT
Sbjct: 431 PNYQPPVT 454
Score = 104 bits (221), Expect(2) = 8e-026
Identities = 47/55 (85%), Positives = 48/55 (87%)
Frame = +3 / -1
Query: 768 KVTGGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKEMR 932
KVTGG * S DAQAFLMASSS NRTW*NCPSLTPSL*NMIL GFCPVAL K+MR
Sbjct: 456 KVTGG**FGSKDAQAFLMASSSNNRTW*NCPSLTPSL*NMIL*GFCPVALLKDMR 292
Score = 102 bits (217), Expect(2) = 2e-025
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = -1 / +1
Query: 932 SHFFLEGDWTKTQEDHILQGWCQ*GTVLPSSVVRT*CH*KGLCIIGV*LPASSYF 768
SH F EG+W +T E+HILQGWCQ GTVLPSSVV T*CH*+GLCI+G L ASSYF
Sbjct: 292 SHIFQEGNWAETSENHILQGWCQRGTVLPSSVV*T*CH*EGLCILGAKLSASSYF 456
Score = 97.3 bits (206), Expect(2) = 6e-021
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -3 / +3
Query: 936 TFSFLSGGRLDKNPRGSYSTGMVSVRDSSTKFCCTNLMPLERPVHHWSLITSLQLL 769
+FS+LS G+L +N R SY TGMVS RDSSTKFCC NLMPL RPVH WS I SLQLL
Sbjct: 288 SFSYLSRGQLGRNLRESYFTGMVSARDSSTKFCCLNLMPLGRPVHPWSQIISLQLL 455
Score = 33.6 bits (67), Expect(2) = 2e-025
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -1 / +2
Query: 977 DPQRGTVSGGMIRE 936
DPQRGTV+GGMI+E
Sbjct: 248 DPQRGTVTGGMIKE 289
Score = 33.1 bits (66), Expect(2) = 8e-026
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / -1
Query: 937 SLIMPPETVPLWG 975
SLIMPP TVPLWG
Sbjct: 288 SLIMPPVTVPLWG 250
Score = 23.5 bits (45), Expect(2) = 6e-021
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3 / +1
Query: 975 SPKGDCLWWHD*GTFSFLSGG 913
SPK +C W HD G G
Sbjct: 250 SPKRNCDWRHDQGASHIFQEG 312
>gb|CA030641.1|CA030641 HX07K22r HX Hordeum vulgare subsp. vulgare cDNA clone HX07K22
5-PRIME, mRNA sequence
Length = 621
Score = 114 bits (244), Expect = 7e-025
Identities = 50/65 (76%), Positives = 54/65 (83%)
Frame = -2 / +2
Query: 973 PKGGLSLVA*LGNLLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 794
P+ G + LLISF RATGQKP+RIIFYRDGVSEGQFYQVLLYELDAIRKACASLE
Sbjct: 425 PQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLE 604
Query: 793 SDYQP 779
+YQP
Sbjct: 605 PNYQP 619
Score = 94.1 bits (199), Expect(2) = 6e-021
Identities = 43/52 (82%), Positives = 43/52 (82%)
Frame = +3 / -1
Query: 777 GGW*SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILLGFCPVALQKEMR 932
GGW* S DA AFLMASSSY RT *N PSLTPSL*NMIL GFCPVAL KEMR
Sbjct: 621 GGW*LGSKDAHAFLMASSSYRRT**NWPSLTPSL*NMILWGFCPVALLKEMR 466
Score = 26.7 bits (52), Expect(2) = 6e-021
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / -2
Query: 932 KVP*SCHQRQSPFGD 976
+ P*SCHQ Q FGD
Sbjct: 467 EAP*SCHQSQFLFGD 423
>gb|BU969648.1|BU969648 HB12C12r BC Hordeum vulgare subsp. vulgare cDNA clone HB12C12
5-PRIME, mRNA sequence
Length = 471
Score = 114 bits (243), Expect = 9e-025
Identities = 43/84 (51%), Positives = 57/84 (67%)
Frame = -2 / +2
Query: 727 NNHNDQRAADRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 548
N+H + N+ PGTVVD ++CHP FDFY+C+HAG+ GTSRP HYHVL DE F+
Sbjct: 218 NHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFS 397
Query: 547 ADGLQTLTNNLCYTYARCTRSVSI 476
AD LQ ++L Y Y R T ++S+
Sbjct: 398 ADELQEFVHSLSYVYQRSTTAISV 469
>gb|BG343570.1|BG343570 HVSMEg0006G18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006G18f, mRNA sequence
Length = 1070
Score = 61.1 bits (127), Expect(4) = 4e-022
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = -2 / +1
Query: 904 QKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQK 752
+KP + I +RDGVSE QF QVL ELD I +AC L+ ++ P T +V QK
Sbjct: 493 RKPDQNIIFRDGVSESQFNQVLNIELDQIIEACKVLDENWNPKFTLIVAQK 645
Score = 46.4 bits (95), Expect(4) = 4e-022
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = -2 / +1
Query: 592 RPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARF 428
R HYH L DEN AD LQ L ++L Y Y R + +V + A A F
Sbjct: 778 RATHYHXLHDENTLAADDLQDLGHSLSYVYXRSQQPYQVVSQSVMXFAAVQGAHF 942
Score = 27.6 bits (54), Expect(4) = 4e-022
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2 / +2
Query: 640 EFDFYLCSHAGIQGTSRP 587
++D Y+C+HAG G + P
Sbjct: 731 KYDXYMCAHAGNDGDTGP 784
Score = 24.0 bits (46), Expect(4) = 4e-022
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2 / +3
Query: 673 TVVDSKICHP 644
TVVD+ +CHP
Sbjct: 699 TVVDNAVCHP 728
>gb|BQ472674.1|BQ472674 HB01M23r BC Hordeum vulgare subsp. vulgare cDNA clone HB01M23
5-PRIME, mRNA sequence
Length = 581
Score = 102 bits (218), Expect = 3e-021
Identities = 40/85 (47%), Positives = 56/85 (65%)
Frame = -2 / -1
Query: 637 FDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYY 458
+DFY+C+HAG+ GT+RP HYH+L DE F AD LQ L ++L Y Y R T ++S+V P Y
Sbjct: 575 YDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICY 396
Query: 457 AHLAAFRARFYMEPDTSDSGSVASG 383
AHLAA + +++ D S + G
Sbjct: 395 AHLAAAQVAQFIKFDEMSETSSSQG 321
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 533,506,120
Number of Sequences: 312970
Number of extensions: 9666204
Number of successful extensions: 84127
Number of sequences better than 1.0e-020: 63
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 11494320747
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)