TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3336950.2.1
(645 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA009590.1|CA009590 HU14I23r HU Hordeum vulgare subsp. v... 343 4e-094
gb|AV932103.1|AV932103 AV932103 K. Sato unpublished cDNA li... 342 8e-094
gb|BF264487.2|BF264487 HV_CEa0009I22f Hordeum vulgare seedl... 339 8e-093
gb|CA024621.1|CA024621 HZ49N06r HZ Hordeum vulgare subsp. v... 332 1e-090
gb|CA029603.1|CA029603 HZ65L02r HZ Hordeum vulgare subsp. v... 332 1e-090
gb|BM374077.2|BM374077 EBma03_SQ003_J08_R maternal, 8 DPA, ... 217 2e-059
gb|BI949335.1|BI949335 HVSMEl0013G12f Hordeum vulgare spike... 220 8e-057
gb|BU979580.1|BU979580 HA16J20r HA Hordeum vulgare subsp. v... 218 3e-056
gb|CA029433.1|CA029433 HZ65D06r HZ Hordeum vulgare subsp. v... 208 3e-053
gb|CA024152.1|CA024152 HZ48I02r HZ Hordeum vulgare subsp. v... 199 1e-050
gb|BF627539.2|BF627539 HVSMEb0005C01f Hordeum vulgare seedl... 196 8e-050
gb|CA029014.1|CA029014 HZ63P04r HZ Hordeum vulgare subsp. v... 187 8e-050
gb|CA028957.1|CA028957 HZ63L22r HZ Hordeum vulgare subsp. v... 188 2e-047
gb|CA024885.1|CA024885 HZ50J14r HZ Hordeum vulgare subsp. v... 173 7e-043
gb|CA026435.1|CA026435 HZ55O15r HZ Hordeum vulgare subsp. v... 173 7e-043
gb|BI952689.1|BI952689 HVSMEm0007G12f Hordeum vulgare green... 169 1e-041
gb|CA020538.1|CA020538 HZ36J20r HZ Hordeum vulgare subsp. v... 169 1e-041
gb|CA024147.1|CA024147 HZ48H21r HZ Hordeum vulgare subsp. v... 166 1e-040
gb|BM100077.2|BM100077 EBma01_SQ001_B24_R maternal, 4 DPA, ... 162 2e-039
gb|AW982740.2|AW982740 HVSMEg0004B07f Hordeum vulgare pre-a... 118 2e-032
gb|CB883684.1|CB883684 HQ02P16w HQ Hordeum vulgare subsp. v... 131 3e-030
gb|AV923522.1|AV923522 AV923522 K. Sato unpublished cDNA li... 107 7e-023
>gb|CA009590.1|CA009590 HU14I23r HU Hordeum vulgare subsp. vulgare cDNA clone HU14I23
5-PRIME, mRNA sequence
Length = 598
Score = 343 bits (744), Expect = 4e-094
Identities = 137/164 (83%), Positives = 148/164 (90%)
Frame = -1 / +3
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L FL L C+ CKCLASE E TQ A+L VD+SP LARKIPDTLFGIFFEEINHAGAGGIW
Sbjct: 78 ILCFLLLFCVSCKCLASEFEITQVASLGVDSSPHLARKIPDTLFGIFFEEINHAGAGGIW 257
Query: 312 AELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPT 133
AELVSNRGFEAGG HTPSNI+PWSIIGDDSS+FV TDRTSCFSRN VALRMEVLCDNCP
Sbjct: 258 AELVSNRGFEAGGPHTPSNINPWSIIGDDSSIFVGTDRTSCFSRNKVALRMEVLCDNCPV 437
Query: 132 GGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
GGVG+YNPGFWGMNIE+GK YNLVM VKSPET ++TVSLTSS+G
Sbjct: 438 GGVGIYNPGFWGMNIEDGKTYNLVMHVKSPETIEMTVSLTSSDG 569
Score = 315 bits (682), Expect = 2e-085
Identities = 134/163 (82%), Positives = 142/163 (87%)
Frame = +2 / -1
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMF 181
P ELVSETV S+VSGDLT ITRL* FPSSMFMPQNPGL* PTPP GQLSQRTSILRAT+F
Sbjct: 568 PSELVSETVISIVSGDLTCITRL*VFPSSMFMPQNPGL*MPTPPTGQLSQRTSILRATLF 389
Query: 182 RLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIP 361
RLKHDVRSV TN EESSPMMDHG +FDGVW PPAS PLLLTSSAH+PPAPAWLISSK IP
Sbjct: 388 RLKHDVRSVPTNMEESSPMMDHGLIFDGVWGPPASKPLLLTSSAHIPPAPAWLISSKNIP 209
Query: 362 NSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQSRNKKRR 490
NSVSGIFRA CGE ST R+A WV S SDA+HLQ Q R+KK+R
Sbjct: 208 NSVSGIFRARCGEESTPRLATWVISNSDAKHLQLTQKRSKKQR 80
Score = 214 bits (461), Expect = 5e-055
Identities = 92/133 (69%), Positives = 103/133 (77%)
Frame = -3 / +2
Query: 400 LAAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLL 221
L A CS+DP*Y V ++L*GDQPCR WW+MG TC** R *S RPPYSIK+* MVHHWR L
Sbjct: 170 LTAPCSKDP*YAVWNIL*GDQPCRSWWNMGRTC***RF*SRRPPYSIKY*SMVHHWR*LF 349
Query: 220 CICGDRSYIMFQSKHRCSQDGGPLR*LSYWWCWCLQPRVLGHEHRRRKGLQSCYVC*VTR 41
ICG+R Y+MFQSK CS++GG L *L W CW LQP VLGHEHRR + LQS Y C VTR
Sbjct: 350 HICGNRPYVMFQSKQGCSKNGGSL**LPSWRCWHLQPWVLGHEHRRWEDLQSSYACQVTR 529
Query: 40 NN*LDSFTNKL*R 2
N+ DSFTNKL*R
Sbjct: 530 NDRNDSFTNKL*R 568
Score = 201 bits (434), Expect(2) = 2e-052
Identities = 87/136 (63%), Positives = 103/136 (75%)
Frame = +1 / -3
Query: 1 PVRAC**NCQVSCFW*LNKHNKIVDLSFFYVHAPKPWVVNTNTTSRTIIAKDLHPESNDV 180
PVRAC**NC FW*L+ HN IV L FYVHAP+P VVN NT + +I ++LH SN V
Sbjct: 569 PVRAC**NCHFYRFW*LDMHN*IVGLPIFYVHAPEPRVVNANTANWAVITENLHS*SNLV 390
Query: 181 STET*CTIGLHKYRGVVSNDGPWVNV*WSMEASSFKPSVTNKFSPYATSPCMVDLLKEDP 360
STET* T+ HKY V+SNDGPW+N+*WSM AS FK S+TNKF PY+TS CMVDLLKE
Sbjct: 389 STET*RTVCSHKYGRVISNDGPWINI*WSMGASCFKTSITNKFCPYSTSSCMVDLLKEYS 210
Query: 361 EQCIRDLPSKLRRGVH 408
+Q IRDL SK+R G++
Sbjct: 209 KQRIRDLSSKVR*GIN 162
Score = 177 bits (382), Expect = 4e-044
Identities = 85/129 (65%), Positives = 90/129 (69%)
Frame = +3 / -2
Query: 3 R*SLLVKLSSQLFLVT*QT*QDCRPFLLLCSCPKTLGCKHQHHQ*DNYRKGPPS*EQRCF 182
R SLLVKLS FLVT* * DCR LLCSCP+T GCK QH Q +Y + PP EQ CF
Sbjct: 567 RQSLLVKLSFLSFLVT*HA*LDCRSSHLLCSCPRTQGCKCQHRQLGSYHREPPFLEQPCF 388
Query: 183 D*NMMYDRSPQIQRSRLQ*WTMGQCLMEYGGLQLQTLCY*QVQPICHQPLHG*SPQRRSR 362
D*NM Y PQI +S LQ*WTM LMEYGGL LQ L Y*QV PI HQ LHG*SPQR +
Sbjct: 387 D*NMTYGLFPQIWKSHLQ*WTMD*YLMEYGGLLLQNLYY*QVLPIFHQLLHG*SPQRIFQ 208
Query: 363 TVYQGSSEQ 389
T YQGS EQ
Sbjct: 207 TAYQGSFEQ 181
Score = 163 bits (351), Expect = 7e-040
Identities = 83/130 (63%), Positives = 86/130 (66%)
Frame = -2 / +1
Query: 392 SLLGRSLIHCSGSSLRRSTMQGLVAYGLNLLVTEGLKLEASILHQTLTHGPSLETTPLYL 213
+LL RSLI C SLRRSTMQ LV YG NLLV E LK EA ILHQ L HGPSLE T YL
Sbjct: 178 TLLERSLIRCLEYSLRRSTMQELVEYGQNLLVIEVLKQEAPILHQILIHGPSLEMTLPYL 357
Query: 212 WRPIVHHVSVETSLLSGWRSFAIIXXXXXXVFTTQGFGA*T*KKERSTILLCLLSHQKQL 33
W V HVSVET LL WR I FTT G GA*T*K R TI LC+ SHQK+
Sbjct: 358 WEQTVRHVSVETRLL*EWRFSVITAQLAVLAFTTLGSGA*T*KMGRPTI*LCMSSHQKR* 537
Query: 32 T*QFH*QALT 3
*QFH*QALT
Sbjct: 538 K*QFH*QALT 567
Score = 24.0 bits (46), Expect(2) = 2e-052
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3 / -2
Query: 441 LMPGICSLCRAETRS 485
LMP ICS R E RS
Sbjct: 129 LMPNICSSRRREARS 85
>gb|AV932103.1|AV932103 AV932103 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2e14 5', mRNA sequence
Length = 644
Score = 342 bits (742), Expect = 8e-094
Identities = 135/160 (84%), Positives = 147/160 (91%)
Frame = -1 / +1
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L C GCKC+ASE++ATQTATL VDAS QLARKIPDTLFG+FFEEINHAGAGGIWAELV
Sbjct: 148 LLLFCFGCKCIASELQATQTATLKVDASSQLARKIPDTLFGMFFEEINHAGAGGIWAELV 327
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVG 121
SNRGFEAGGLHTPSNIDPWSIIGDDSS+FV TDRTSCFSRNI+ALRMEVLCD+CP GVG
Sbjct: 328 SNRGFEAGGLHTPSNIDPWSIIGDDSSIFVATDRTSCFSRNIIALRMEVLCDDCPASGVG 507
Query: 120 VYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
+YNPGFWGMNIE+GK YNLVM+VKS E +LTVSL SS+G
Sbjct: 508 IYNPGFWGMNIEDGKTYNLVMYVKSAEAAELTVSLASSDG 627
Score = 294 bits (636), Expect = 3e-079
Identities = 127/159 (79%), Positives = 134/159 (84%)
Frame = +2 / -1
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMF 181
P EL +ETV S S DLT ITRL* FPSSMFMPQNPGL* PTP GQ SQRTSILRA MF
Sbjct: 626 PSELANETVNSAASADLTYITRL*VFPSSMFMPQNPGL*MPTPLAGQSSQRTSILRAIMF 447
Query: 182 RLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIP 361
RLKHDVRSV+TN EESSP++DHGS+FDGVW PPAS PLLLTSSAHMPPAPAWLISSK IP
Sbjct: 446 RLKHDVRSVATNMEESSPIIDHGSIFDGVWSPPASKPLLLTSSAHMPPAPAWLISSKNIP 267
Query: 362 NSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQSRN 478
NSVSGIFRASC EAST RVAV VA SDA HL P Q+R+
Sbjct: 266 NSVSGIFRASCDEASTLRVAVCVACNSDAMHLHPKQNRS 150
Score = 201 bits (433), Expect = 3e-051
Identities = 85/136 (62%), Positives = 102/136 (75%)
Frame = +1 / -3
Query: 1 PVRAC**NCQVSCFW*LNKHNKIVDLSFFYVHAPKPWVVNTNTTSRTIIAKDLHPESNDV 180
P+ AC**NCQ F * N HN IV LS FYVHAP+P VVN NTT +I ++LHP+S++V
Sbjct: 627 PIGAC**NCQFCSFC*FNIHN*IVGLSIFYVHAPEPRVVNANTTGWAVITENLHPKSDNV 448
Query: 181 STET*CTIGLHKYRGVVSNDGPWVNV*WSMEASSFKPSVTNKFSPYATSPCMVDLLKEDP 360
STET*CTI HKY VV+N PWVN+*W ME+SSFK S+TNKF PYAT CMVDLLK+ P
Sbjct: 447 STET*CTISRHKYGRVVANYRPWVNI*WRMESSSFKTSITNKFCPYATGSCMVDLLKKHP 268
Query: 361 EQCIRDLPSKLRRGVH 408
+QC+ L KL G++
Sbjct: 267 KQCVWYLSGKL**GIN 220
Score = 199 bits (429), Expect = 1e-050
Identities = 87/131 (66%), Positives = 99/131 (75%)
Frame = -3 / +3
Query: 400 LAAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLL 221
L AC +D +TV D+ *GDQPCR WHMG TC** R *SWR PY+IK+*PMV++WRRL
Sbjct: 228 LITACPKDTRHTVWDVF*GDQPCRSRWHMGRTC***RF*SWRTPYAIKY*PMVYNWRRLF 407
Query: 220 CICGDRSYIMFQSKHRCSQDGGPLR*LSYWWCWCLQPRVLGHEHRRRKGLQSCYVC*VTR 41
ICGD SYIMFQSKH S DGG L *L WCW LQP VLGHEHRR K LQS YVC*++R
Sbjct: 408 HICGD*SYIMFQSKHYRS*DGGSL**LPSQWCWHLQPWVLGHEHRRWKDLQSSYVC*ISR 587
Query: 40 NN*LDSFTNKL 8
+ +DSF +KL
Sbjct: 588 SCRIDSFISKL 620
Score = 173 bits (372), Expect = 9e-043
Identities = 79/120 (65%), Positives = 91/120 (75%)
Frame = +3 / -2
Query: 9 SLLVKLSSQLFLVT*QT*QDCRPFLLLCSCPKTLGCKHQHHQ*DNYRKGPPS*EQRCFD* 188
SLL+KLS L+ * T* DCR F LLCSCP+T GCK QHH ++ + PPS*E+ CFD*
Sbjct: 619 SLLMKLSILQLLLI*HT*LDCRSFHLLCSCPRTQGCKCQHHWLGSHHREPPS*ER*CFD* 440
Query: 189 NMMYDRSPQIQRSRLQ*WTMGQCLMEYGGLQLQTLCY*QVQPICHQPLHG*SPQRRSRTV 368
NMMYD+SPQI +SR Q TMGQ LM YG LQLQ L Y*QV PICH+ LHG*SPQ+ S+TV
Sbjct: 439 NMMYDQSPQIWKSRRQL*TMGQYLMAYGVLQLQNLYY*QVLPICHRLLHG*SPQKTSQTV 260
Score = 155 bits (333), Expect = 2e-037
Identities = 80/128 (62%), Positives = 83/128 (64%)
Frame = -2 / +2
Query: 392 SLLGRSLIHCSGSSLRRSTMQGLVAYGLNLLVTEGLKLEASILHQTLTHGPSLETTPLYL 213
SL R HC G LRRSTMQ VAYG NLLV E LKLE SI HQ LTHG L TT YL
Sbjct: 236 SLPERYQTHCLGCFLRRSTMQEPVAYGQNLLVIEVLKLEDSIRHQILTHGL*LATTLPYL 415
Query: 212 WRPIVHHVSVETSLLSGWRSFAIIXXXXXXVFTTQGFGA*T*KKERSTILLCLLSHQKQL 33
WR IVHHVSVET L GWR + FTT G GA*T*K ER TI LC+L+ QK
Sbjct: 416 WRLIVHHVSVETLSLLGWRFSVMTAQPVVLAFTTLGSGA*T*KMERPTI*LCMLNQQKLQ 595
Query: 32 T*QFH*QA 9
*QFH*QA
Sbjct: 596 N*QFH*QA 619
>gb|BF264487.2|BF264487 HV_CEa0009I22f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009I22f, mRNA sequence
Length = 865
Score = 339 bits (735), Expect = 8e-093
Identities = 134/160 (83%), Positives = 146/160 (91%)
Frame = -1 / +1
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L C GCKC+A E++ATQTATL VDAS QLARKIPDTLFG+FFEEINHAGAGGIWAELV
Sbjct: 133 LLLFCFGCKCIAWELQATQTATLKVDASSQLARKIPDTLFGMFFEEINHAGAGGIWAELV 312
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVG 121
SNRGFEAGGLHTPSNIDPWSIIGDDSS+FV TDRTSCFSRNI+ALRMEVLCD+CP GVG
Sbjct: 313 SNRGFEAGGLHTPSNIDPWSIIGDDSSIFVATDRTSCFSRNIIALRMEVLCDDCPASGVG 492
Query: 120 VYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
+YNPGFWGMNIE+GK YNLVM+VKS E +LTVSL SS+G
Sbjct: 493 IYNPGFWGMNIEDGKTYNLVMYVKSAEAAELTVSLASSDG 612
Score = 291 bits (629), Expect = 3e-078
Identities = 126/159 (79%), Positives = 133/159 (83%)
Frame = +2 / -3
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMF 181
P EL +ETV S S DLT ITRL* FPSSMFMPQNPGL* PTP GQ SQRTSILRA MF
Sbjct: 611 PSELANETVNSAASADLTYITRL*VFPSSMFMPQNPGL*MPTPLAGQSSQRTSILRAIMF 432
Query: 182 RLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIP 361
RLKHDVRSV+TN EESSP++DHGS+FDGVW PPAS PLLLTSSAHMPPAPAWLISSK IP
Sbjct: 431 RLKHDVRSVATNMEESSPIIDHGSIFDGVWSPPASKPLLLTSSAHMPPAPAWLISSKNIP 252
Query: 362 NSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQSRN 478
NSVSGIFRASC EAST RVAV VA S A HL P Q+R+
Sbjct: 251 NSVSGIFRASCDEASTLRVAVCVACNSHAMHLHPKQNRS 135
Score = 201 bits (433), Expect = 3e-051
Identities = 85/136 (62%), Positives = 102/136 (75%)
Frame = +1 / -2
Query: 1 PVRAC**NCQVSCFW*LNKHNKIVDLSFFYVHAPKPWVVNTNTTSRTIIAKDLHPESNDV 180
P+ AC**NCQ F * N HN IV LS FYVHAP+P VVN NTT +I ++LHP+S++V
Sbjct: 612 PIGAC**NCQFCSFC*FNIHN*IVGLSIFYVHAPEPRVVNANTTGWAVITENLHPKSDNV 433
Query: 181 STET*CTIGLHKYRGVVSNDGPWVNV*WSMEASSFKPSVTNKFSPYATSPCMVDLLKEDP 360
STET*CTI HKY VV+N PWVN+*W ME+SSFK S+TNKF PYAT CMVDLLK+ P
Sbjct: 432 STET*CTISRHKYGRVVANYRPWVNI*WRMESSSFKTSITNKFCPYATGSCMVDLLKKHP 253
Query: 361 EQCIRDLPSKLRRGVH 408
+QC+ L KL G++
Sbjct: 252 KQCVWYLSGKL**GIN 205
Score = 199 bits (429), Expect = 1e-050
Identities = 87/131 (66%), Positives = 99/131 (75%)
Frame = -3 / +3
Query: 400 LAAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLL 221
L AC +D +TV D+ *GDQPCR WHMG TC** R *SWR PY+IK+*PMV++WRRL
Sbjct: 213 LITACPKDTRHTVWDVF*GDQPCRSRWHMGRTC***RF*SWRTPYAIKY*PMVYNWRRLF 392
Query: 220 CICGDRSYIMFQSKHRCSQDGGPLR*LSYWWCWCLQPRVLGHEHRRRKGLQSCYVC*VTR 41
ICGD SYIMFQSKH S DGG L *L WCW LQP VLGHEHRR K LQS YVC*++R
Sbjct: 393 HICGD*SYIMFQSKHYRS*DGGSL**LPSQWCWHLQPWVLGHEHRRWKDLQSSYVC*ISR 572
Query: 40 NN*LDSFTNKL 8
+ +DSF +KL
Sbjct: 573 SCRIDSFISKL 605
Score = 173 bits (372), Expect = 9e-043
Identities = 79/120 (65%), Positives = 91/120 (75%)
Frame = +3 / -1
Query: 9 SLLVKLSSQLFLVT*QT*QDCRPFLLLCSCPKTLGCKHQHHQ*DNYRKGPPS*EQRCFD* 188
SLL+KLS L+ * T* DCR F LLCSCP+T GCK QHH ++ + PPS*E+ CFD*
Sbjct: 604 SLLMKLSILQLLLI*HT*LDCRSFHLLCSCPRTQGCKCQHHWLGSHHREPPS*ER*CFD* 425
Query: 189 NMMYDRSPQIQRSRLQ*WTMGQCLMEYGGLQLQTLCY*QVQPICHQPLHG*SPQRRSRTV 368
NMMYD+SPQI +SR Q TMGQ LM YG LQLQ L Y*QV PICH+ LHG*SPQ+ S+TV
Sbjct: 424 NMMYDQSPQIWKSRRQL*TMGQYLMAYGVLQLQNLYY*QVLPICHRLLHG*SPQKTSQTV 245
Score = 155 bits (333), Expect = 2e-037
Identities = 80/128 (62%), Positives = 83/128 (64%)
Frame = -2 / +2
Query: 392 SLLGRSLIHCSGSSLRRSTMQGLVAYGLNLLVTEGLKLEASILHQTLTHGPSLETTPLYL 213
SL R HC G LRRSTMQ VAYG NLLV E LKLE SI HQ LTHG L TT YL
Sbjct: 221 SLPERYQTHCLGCFLRRSTMQEPVAYGQNLLVIEVLKLEDSIRHQILTHGL*LATTLPYL 400
Query: 212 WRPIVHHVSVETSLLSGWRSFAIIXXXXXXVFTTQGFGA*T*KKERSTILLCLLSHQKQL 33
WR IVHHVSVET L GWR + FTT G GA*T*K ER TI LC+L+ QK
Sbjct: 401 WRLIVHHVSVETLSLLGWRFSVMTAQPVVLAFTTLGSGA*T*KMERPTI*LCMLNQQKLQ 580
Query: 32 T*QFH*QA 9
*QFH*QA
Sbjct: 581 N*QFH*QA 604
>gb|CA024621.1|CA024621 HZ49N06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49N06
5-PRIME, mRNA sequence
Length = 598
Score = 332 bits (719), Expect = 1e-090
Identities = 130/153 (84%), Positives = 141/153 (92%)
Frame = -1 / +3
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L C GCKC+ASE++ATQTATL VDAS QLARKIPDTLFG+FFEEINHAGAGGIWAELV
Sbjct: 138 LLLFCFGCKCIASELQATQTATLKVDASSQLARKIPDTLFGMFFEEINHAGAGGIWAELV 317
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVG 121
SNRGFEAGGLHTPSNIDPWSIIGDDSS+FV TDRTSCFSRNI+ALRMEVLCD+CP GVG
Sbjct: 318 SNRGFEAGGLHTPSNIDPWSIIGDDSSIFVATDRTSCFSRNIIALRMEVLCDDCPASGVG 497
Query: 120 VYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTV 22
+YNPGFWGMNIE+GK YNLVM+VKS E +LTV
Sbjct: 498 IYNPGFWGMNIEDGKTYNLVMYVKSAEAAELTV 596
Score = 287 bits (621), Expect = 4e-077
Identities = 124/153 (81%), Positives = 130/153 (84%)
Frame = +2 / -1
Query: 20 ETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMFRLKHDV 199
ETV S S DLT ITRL* FPSSMFMPQNPGL* PTP GQ SQRTSILRA MFRLKHDV
Sbjct: 598 ETVNSAASADLTYITRL*VFPSSMFMPQNPGL*MPTPLAGQSSQRTSILRAIMFRLKHDV 419
Query: 200 RSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVSGI 379
RSV+TN EESSP++DHGS+FDGVW PPAS PLLLTSSAHMPPAPAWLISSK IPNSVSGI
Sbjct: 418 RSVATNMEESSPIIDHGSIFDGVWSPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGI 239
Query: 380 FRASCGEASTARVAVWVASTSDARHLQPMQSRN 478
FRASC EAST RVAV VA SDA HL P Q+R+
Sbjct: 238 FRASCDEASTLRVAVCVACNSDAMHLHPKQNRS 140
Score = 195 bits (420), Expect = 2e-049
Identities = 85/127 (66%), Positives = 96/127 (75%)
Frame = -3 / +2
Query: 400 LAAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLL 221
L AC +D +TV D+ *GDQPCR WHMG TC** R *SWR PY+IK+*PMV++WRRL
Sbjct: 218 LITACPKDTRHTVWDVF*GDQPCRSRWHMGRTC***RF*SWRTPYAIKY*PMVYNWRRLF 397
Query: 220 CICGDRSYIMFQSKHRCSQDGGPLR*LSYWWCWCLQPRVLGHEHRRRKGLQSCYVC*VTR 41
ICGD SYIMFQSKH S DGG L *L WCW LQP VLGHEHRR K LQS YVC*++R
Sbjct: 398 HICGD*SYIMFQSKHYRS*DGGSL**LPSQWCWHLQPWVLGHEHRRWKDLQSSYVC*ISR 577
Query: 40 NN*LDSF 20
+ +DSF
Sbjct: 578 SCRIDSF 598
Score = 190 bits (410), Expect = 5e-048
Identities = 80/129 (62%), Positives = 96/129 (74%)
Frame = +1 / -3
Query: 22 NCQVSCFW*LNKHNKIVDLSFFYVHAPKPWVVNTNTTSRTIIAKDLHPESNDVSTET*CT 201
NCQ F * N HN IV LS FYVHAP+P VVN NTT +I ++LHP+S++VSTET*CT
Sbjct: 596 NCQFCSFC*FNIHN*IVGLSIFYVHAPEPRVVNANTTGWAVITENLHPKSDNVSTET*CT 417
Query: 202 IGLHKYRGVVSNDGPWVNV*WSMEASSFKPSVTNKFSPYATSPCMVDLLKEDPEQCIRDL 381
I HKY VV+N PWVN+*W ME+SSFK S+TNKF PYAT CMVDLLK+ P+QC+ L
Sbjct: 416 ISRHKYGRVVANYRPWVNI*WRMESSSFKTSITNKFCPYATGSCMVDLLKKHPKQCVWYL 237
Query: 382 PSKLRRGVH 408
KL G++
Sbjct: 236 SGKL**GIN 210
Score = 167 bits (359), Expect = 6e-041
Identities = 76/116 (65%), Positives = 87/116 (75%)
Frame = +3 / -2
Query: 21 KLSSQLFLVT*QT*QDCRPFLLLCSCPKTLGCKHQHHQ*DNYRKGPPS*EQRCFD*NMMY 200
KLS L+ * T* DCR F LLCSCP+T GCK QHH ++ + PPS*E+ CFD*NMMY
Sbjct: 597 KLSILQLLLI*HT*LDCRSFHLLCSCPRTQGCKCQHHWLGSHHREPPS*ER*CFD*NMMY 418
Query: 201 DRSPQIQRSRLQ*WTMGQCLMEYGGLQLQTLCY*QVQPICHQPLHG*SPQRRSRTV 368
D+SPQI +SR Q TMGQ LM YG LQLQ L Y*QV PICH+ LHG*SPQ+ S+TV
Sbjct: 417 DQSPQIWKSRRQL*TMGQYLMAYGVLQLQNLYY*QVLPICHRLLHG*SPQKTSQTV 250
Score = 147 bits (315), Expect = 7e-035
Identities = 76/124 (61%), Positives = 79/124 (63%)
Frame = -2 / +1
Query: 392 SLLGRSLIHCSGSSLRRSTMQGLVAYGLNLLVTEGLKLEASILHQTLTHGPSLETTPLYL 213
SL R HC G LRRSTMQ VAYG NLLV E LKLE SI HQ LTHG L TT YL
Sbjct: 226 SLPERYQTHCLGCFLRRSTMQEPVAYGQNLLVIEVLKLEDSIRHQILTHGL*LATTLPYL 405
Query: 212 WRPIVHHVSVETSLLSGWRSFAIIXXXXXXVFTTQGFGA*T*KKERSTILLCLLSHQKQL 33
WR IVHHVSVET L GWR + FTT G GA*T*K ER TI LC+L+ QK
Sbjct: 406 WRLIVHHVSVETLSLLGWRFSVMTAQPVVLAFTTLGSGA*T*KMERPTI*LCMLNQQKLQ 585
Query: 32 T*QF 21
*QF
Sbjct: 586 N*QF 597
>gb|CA029603.1|CA029603 HZ65L02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65L02
5-PRIME, mRNA sequence
Length = 598
Score = 332 bits (719), Expect = 1e-090
Identities = 130/153 (84%), Positives = 141/153 (92%)
Frame = -1 / +3
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L C GCKC+ASE++ATQTATL VDAS QLARKIPDTLFG+FFEEINHAGAGGIWAELV
Sbjct: 138 LLLFCFGCKCIASELQATQTATLKVDASSQLARKIPDTLFGMFFEEINHAGAGGIWAELV 317
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVG 121
SNRGFEAGGLHTPSNIDPWSIIGDDSS+FV TDRTSCFSRNI+ALRMEVLCD+CP GVG
Sbjct: 318 SNRGFEAGGLHTPSNIDPWSIIGDDSSIFVATDRTSCFSRNIIALRMEVLCDDCPASGVG 497
Query: 120 VYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTV 22
+YNPGFWGMNIE+GK YNLVM+VKS E +LTV
Sbjct: 498 IYNPGFWGMNIEDGKTYNLVMYVKSAEAAELTV 596
Score = 287 bits (621), Expect = 4e-077
Identities = 124/153 (81%), Positives = 130/153 (84%)
Frame = +2 / -1
Query: 20 ETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMFRLKHDV 199
ETV S S DLT ITRL* FPSSMFMPQNPGL* PTP GQ SQRTSILRA MFRLKHDV
Sbjct: 598 ETVNSAASADLTYITRL*VFPSSMFMPQNPGL*MPTPLAGQSSQRTSILRAIMFRLKHDV 419
Query: 200 RSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVSGI 379
RSV+TN EESSP++DHGS+FDGVW PPAS PLLLTSSAHMPPAPAWLISSK IPNSVSGI
Sbjct: 418 RSVATNMEESSPIIDHGSIFDGVWSPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGI 239
Query: 380 FRASCGEASTARVAVWVASTSDARHLQPMQSRN 478
FRASC EAST RVAV VA SDA HL P Q+R+
Sbjct: 238 FRASCDEASTLRVAVCVACNSDAMHLHPKQNRS 140
Score = 195 bits (420), Expect = 2e-049
Identities = 85/127 (66%), Positives = 96/127 (75%)
Frame = -3 / +2
Query: 400 LAAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLL 221
L AC +D +TV D+ *GDQPCR WHMG TC** R *SWR PY+IK+*PMV++WRRL
Sbjct: 218 LITACPKDTRHTVWDVF*GDQPCRSRWHMGRTC***RF*SWRTPYAIKY*PMVYNWRRLF 397
Query: 220 CICGDRSYIMFQSKHRCSQDGGPLR*LSYWWCWCLQPRVLGHEHRRRKGLQSCYVC*VTR 41
ICGD SYIMFQSKH S DGG L *L WCW LQP VLGHEHRR K LQS YVC*++R
Sbjct: 398 HICGD*SYIMFQSKHYRS*DGGSL**LPSQWCWHLQPWVLGHEHRRWKDLQSSYVC*ISR 577
Query: 40 NN*LDSF 20
+ +DSF
Sbjct: 578 SCRIDSF 598
Score = 190 bits (410), Expect = 5e-048
Identities = 80/129 (62%), Positives = 96/129 (74%)
Frame = +1 / -3
Query: 22 NCQVSCFW*LNKHNKIVDLSFFYVHAPKPWVVNTNTTSRTIIAKDLHPESNDVSTET*CT 201
NCQ F * N HN IV LS FYVHAP+P VVN NTT +I ++LHP+S++VSTET*CT
Sbjct: 596 NCQFCSFC*FNIHN*IVGLSIFYVHAPEPRVVNANTTGWAVITENLHPKSDNVSTET*CT 417
Query: 202 IGLHKYRGVVSNDGPWVNV*WSMEASSFKPSVTNKFSPYATSPCMVDLLKEDPEQCIRDL 381
I HKY VV+N PWVN+*W ME+SSFK S+TNKF PYAT CMVDLLK+ P+QC+ L
Sbjct: 416 ISRHKYGRVVANYRPWVNI*WRMESSSFKTSITNKFCPYATGSCMVDLLKKHPKQCVWYL 237
Query: 382 PSKLRRGVH 408
KL G++
Sbjct: 236 SGKL**GIN 210
Score = 167 bits (359), Expect = 6e-041
Identities = 76/116 (65%), Positives = 87/116 (75%)
Frame = +3 / -2
Query: 21 KLSSQLFLVT*QT*QDCRPFLLLCSCPKTLGCKHQHHQ*DNYRKGPPS*EQRCFD*NMMY 200
KLS L+ * T* DCR F LLCSCP+T GCK QHH ++ + PPS*E+ CFD*NMMY
Sbjct: 597 KLSILQLLLI*HT*LDCRSFHLLCSCPRTQGCKCQHHWLGSHHREPPS*ER*CFD*NMMY 418
Query: 201 DRSPQIQRSRLQ*WTMGQCLMEYGGLQLQTLCY*QVQPICHQPLHG*SPQRRSRTV 368
D+SPQI +SR Q TMGQ LM YG LQLQ L Y*QV PICH+ LHG*SPQ+ S+TV
Sbjct: 417 DQSPQIWKSRRQL*TMGQYLMAYGVLQLQNLYY*QVLPICHRLLHG*SPQKTSQTV 250
Score = 147 bits (315), Expect = 7e-035
Identities = 76/124 (61%), Positives = 79/124 (63%)
Frame = -2 / +1
Query: 392 SLLGRSLIHCSGSSLRRSTMQGLVAYGLNLLVTEGLKLEASILHQTLTHGPSLETTPLYL 213
SL R HC G LRRSTMQ VAYG NLLV E LKLE SI HQ LTHG L TT YL
Sbjct: 226 SLPERYQTHCLGCFLRRSTMQEPVAYGQNLLVIEVLKLEDSIRHQILTHGL*LATTLPYL 405
Query: 212 WRPIVHHVSVETSLLSGWRSFAIIXXXXXXVFTTQGFGA*T*KKERSTILLCLLSHQKQL 33
WR IVHHVSVET L GWR + FTT G GA*T*K ER TI LC+L+ QK
Sbjct: 406 WRLIVHHVSVETLSLLGWRFSVMTAQPVVLAFTTLGSGA*T*KMERPTI*LCMLNQQKLQ 585
Query: 32 T*QF 21
*QF
Sbjct: 586 N*QF 597
>gb|BM374077.2|BM374077 EBma03_SQ003_J08_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_J08 5', mRNA sequence
Length = 659
Score = 217 bits (468), Expect(2) = 2e-059
Identities = 88/128 (68%), Positives = 100/128 (78%)
Frame = -1 / +3
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L GC LA+E+E QTA L VD S + ARKIP TLFG+FFEEINHAGAGG+WAELV
Sbjct: 126 LLSLSCGCLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELV 305
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVG 121
SN+GFE GG HTPSNIDPWSIIGD+SS++V+T+RTSCFSRNIVALRME+LC CP G
Sbjct: 306 SNKGFETGGPHTPSNIDPWSIIGDESSIYVKTERTSCFSRNIVALRMEILCAKCPAGRCW 485
Query: 120 VYNPGFWG 97
P G
Sbjct: 486 YLQPRILG 509
Score = 151 bits (324), Expect(2) = 3e-051
Identities = 71/134 (52%), Positives = 86/134 (64%)
Frame = +2 / -2
Query: 131 PVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSS 310
P G L+QR SILRAT+F LK DV SV T E+SSPM+DHGSMF+GV PP S PLLLTSS
Sbjct: 475 PAGHLAQRISILRATIFLLKQDVLSVFTYMEDSSPMIDHGSMFEGV*GPPVSKPLLLTSS 296
Query: 311 AHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQSRNKKRR 490
AH PPAPAWLISSK P V GIF A+ + ST AV S+S A P + + +
Sbjct: 295 AHNPPAPAWLISSKNKPKRV*GIFLAAFHDVSTCSSAV*APSSSAASARHPQLNERRSKE 116
Query: 491 RTARGAASLLVIPI 532
+ + ++PI
Sbjct: 115 QRMACKVAASLLPI 74
Score = 96.4 bits (204), Expect(3) = 1e-031
Identities = 43/87 (49%), Positives = 56/87 (64%)
Frame = +1 / -1
Query: 133 SRTIIAKDLHPESNDVSTET*CTIGLHKYRGVVSNDGPWVNV*WSMEASSFKPSVTNKFS 312
S T+ K+ HP SND+STET C+ LH Y G V+ND PW+ V* S+ S FK VT+K
Sbjct: 473 SWTLGTKNFHP*SNDISTETRCSFSLHVYGGFVTNDRPWIYV*RSVRPSGFKTFVTDKLR 294
Query: 313 PYATSPCMVDLLKEDPEQCIRDLPSKL 393
P +TS +VD LKE ++ +RDL L
Sbjct: 293 P*STSSSVVDFLKEQAKEGLRDLSGGL 213
Score = 84.5 bits (178), Expect(3) = 4e-038
Identities = 31/44 (70%), Positives = 38/44 (86%)
Frame = -1 / +1
Query: 132 GGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
GGVG+YNPGFWGMNIEEGK YNLVM+++S E+ +L SLT S+G
Sbjct: 475 GGVGIYNPGFWGMNIEEGKSYNLVMYIRSLESVELAASLTCSDG 606
Score = 81.3 bits (171), Expect(3) = 4e-038
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = -3 / +2
Query: 382 EDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLLCICGDR 203
+DP + +L*G+QP WW MG C *QR *+ R +S KH MV+HW R+L I D
Sbjct: 224 KDPSNPLWLVL*GNQPRWSWWIMGGACQ*QRF*NRRASHSFKHRSMVYHW*RILHIRED* 403
Query: 202 SYIMFQSKHRCSQDGGPLR*LSYW 131
I+FQ K+RCS+DG L +S W
Sbjct: 404 KNILFQ*KYRCSKDGNSLCQVSSW 475
Score = 79.0 bits (166), Expect(2) = 6e-022
Identities = 42/83 (50%), Positives = 50/83 (60%)
Frame = +3 / -3
Query: 132 Q*DNYRKGPPS*EQRCFD*NMMYDRSPQIQRSRLQ*WTMGQCLMEYGGLQLQTLCY*QVQ 311
Q D + K PS EQR F *N M+ +S +I R R Q* TM CL E L+ Q LCY*Q
Sbjct: 474 QLDTWHKEFPSLEQRYFY*NKMFFQSSRIWRIRHQ**TMDLCLKECEALRFQNLCY*QAP 295
Query: 312 PICHQPLHG*SPQRRSRTVYQGS 380
PI HQ G* PQR S+ ++GS
Sbjct: 294 PIIHQLQRG*FPQRTSQRGFEGS 226
Score = 70.7 bits (148), Expect(2) = 3e-051
Identities = 32/44 (72%), Positives = 32/44 (72%)
Frame = +2 / -1
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPP 133
P E VSE S S DL ITRL* FPSSMFMPQNPGL* PTPP
Sbjct: 605 PSEHVSEAANSTDSSDLIYITRL*LFPSSMFMPQNPGL*IPTPP 474
Score = 47.8 bits (98), Expect(3) = 1e-031
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1 / -3
Query: 58 HNKIVDLSFFYVHAPKPWVVNTNT 129
H +I+ L FFYVHAP+ WVVNTNT
Sbjct: 549 HYQIIALPFFYVHAPESWVVNTNT 478
Score = 44.6 bits (91), Expect(2) = 6e-022
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +3 / -2
Query: 18 VKLSSQLFLVT*QT*QDCRPFLLLCSCPKTLGCKHQH 128
VK + LV * T D LLLCSCP+ LGCK+QH
Sbjct: 589 VKQLTPRILVI*YTLPDYSSSLLLCSCPRILGCKYQH 479
Score = 32.2 bits (64), Expect(2) = 2e-059
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -2 / +2
Query: 119 FTTQGFGA*T*KKERSTILLCLLSHQKQLT*QFH 18
FTTQ GA*T*KK R+ I C+ H +* H
Sbjct: 488 FTTQDSGA*T*KKGRAIIW*CISDH*NPWS*LLH 589
Score = 30.4 bits (60), Expect(3) = 4e-038
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1 / +3
Query: 540 WKRMGITSNDAAPRAVLLRFLFLLCIGCKCLASEVE 433
W + + S DAA +L L LL + C CLA E
Sbjct: 60 WSKGRMGSKDAATLHAILCSLLLLSLSCGCLALAAE 167
Score = 29.9 bits (59), Expect(3) = 1e-031
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2 / -2
Query: 431 ASTSDARHLQPMQSRNKKRRRTARGAASLLVI 526
+S + ARH Q + R+K++R + AASLL I
Sbjct: 169 SSAASARHPQLNERRSKEQRMACKVAASLLPI 74
>gb|BI949335.1|BI949335 HVSMEl0013G12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0013G12f, mRNA sequence
Length = 489
Score = 220 bits (474), Expect = 8e-057
Identities = 88/119 (73%), Positives = 100/119 (84%)
Frame = -1 / +3
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L GC LA+E+E TA L VD S + ARKIP TLFG+FFEEINHAGAGG+WAELV
Sbjct: 132 LLSLSCGCLALAAELEGAHTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELV 311
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGV 124
SN+GFEAGG HTPSNIDPWSIIGD+SS++V+T+RTSCFSRNIVAL ME+LC CPTGGV
Sbjct: 312 SNKGFEAGGPHTPSNIDPWSIIGDESSIYVKTERTSCFSRNIVALTMEILCAKCPTGGV 488
Score = 157 bits (337), Expect = 6e-038
Identities = 74/136 (54%), Positives = 89/136 (65%)
Frame = +2 / -3
Query: 125 TPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLT 304
TPPVG L+QR SI+RAT+F LK DV SV T E+SSPM+DHGSMF+GV PPAS PLLLT
Sbjct: 487 TPPVGHLAQRISIVRATIFLLKQDVLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLT 308
Query: 305 SSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQSRNKK 484
SSAH PPAPAWLISSK P V GIF A+ + ST AV S+S A P + +
Sbjct: 307 SSAHNPPAPAWLISSKNKPKRV*GIFLAAFHDVSTCSSAV*APSSSAASARHPQLNERRS 128
Query: 485 RRRTARGAASLLVIPI 532
+ + + +PI
Sbjct: 127 KEQRMACKVAASGLPI 80
Score = 94.5 bits (200), Expect(2) = 4e-021
Identities = 43/90 (47%), Positives = 56/90 (62%)
Frame = +1 / -2
Query: 124 NTTSRTIIAKDLHPESNDVSTET*CTIGLHKYRGVVSNDGPWVNV*WSMEASSFKPSVTN 303
N S T+ K+ H SND+STET C+ LH Y G V+ND PW+ V* S+ S FK VT+
Sbjct: 488 NPASWTLGTKNFHR*SNDISTETRCSFSLHVYGGFVTNDRPWIYV*RSVRPSGFKTFVTD 309
Query: 304 KFSPYATSPCMVDLLKEDPEQCIRDLPSKL 393
K P +TS +VD LKE ++ +RDL L
Sbjct: 308 KLRP*STSSSVVDFLKEQAKEGLRDLSGGL 219
Score = 26.3 bits (51), Expect(2) = 4e-021
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2 / -3
Query: 431 ASTSDARHLQPMQSRNKKRRRTARGAASLLVI 526
+S + ARH Q + R+K++R + AAS L I
Sbjct: 175 SSAASARHPQLNERRSKEQRMACKVAASGLPI 80
>gb|BU979580.1|BU979580 HA16J20r HA Hordeum vulgare subsp. vulgare cDNA clone HA16J20
5-PRIME, mRNA sequence
Length = 372
Score = 218 bits (470), Expect = 3e-056
Identities = 84/104 (80%), Positives = 94/104 (90%)
Frame = -1 / +2
Query: 387 ARKIPDTLFGIFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVE 208
ARKIP TLFG+ EEINHAGAGG+WAELVSN+GFEAGG TPSNIDPWSIIGD+SS++V+
Sbjct: 59 ARKIPQTLFGLXXEEINHAGAGGLWAELVSNKGFEAGGPDTPSNIDPWSIIGDESSIYVK 238
Query: 207 TDRTSCFSRNIVALRMEVLCDNCPTGGVGVYNPGFWGMNIEEGK 76
T+RTS SRNIVALRME+LC CP GGVG+YNPGFWGMNIEEGK
Sbjct: 239 TERTSXXSRNIVALRMEILCAKCPAGGVGIYNPGFWGMNIEEGK 370
Score = 178 bits (383), Expect = 3e-044
Identities = 78/105 (74%), Positives = 84/105 (80%)
Frame = +2 / -1
Query: 77 FPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEESSPMMDHGSM 256
FPSSMFMPQNPGL* PTPP G L+QR SILRAT+F L DV SV T E+SSPM+DHGSM
Sbjct: 369 FPSSMFMPQNPGL*IPTPPAGHLAQRISILRATIFLLXXDVLSVFTYMEDSSPMIDHGSM 190
Query: 257 FDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVSGIFRAS 391
F+GV PPAS PLLLTSSAH PPAPAWLISSK P V GIF A+
Sbjct: 189 FEGVSGPPASKPLLLTSSAHNPPAPAWLISSKXKPKRV*GIFLAA 55
Score = 125 bits (267), Expect = 3e-028
Identities = 54/106 (50%), Positives = 68/106 (64%)
Frame = +1 / -3
Query: 76 LSFFYVHAPKPWVVNTNTTSRTIIAKDLHPESNDVSTET*CTIGLHKYRGVVSNDGPWVN 255
L FFYVHAP+ WVVNTNT S T+ K+ HP SND+ST C+ LH Y G V+ND PW+
Sbjct: 370 LPFFYVHAPESWVVNTNTASWTLGTKNFHP*SNDISTAXRCSFSLHVYGGFVTNDRPWIY 191
Query: 256 V*WSMEASSFKPSVTNKFSPYATSPCMVDLLKEDPEQCIRDLPSKL 393
V* S+ S FK VT+K P +TS +VD L ++ +RDL L
Sbjct: 190 V*RSVRPSGFKTFVTDKLRP*STSSSVVDFLXXQAKEGLRDLSGGL 53
Score = 112 bits (240), Expect = 1e-024
Identities = 50/90 (55%), Positives = 59/90 (65%)
Frame = -3 / +1
Query: 346 GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLLCICGDRSYIMFQSKHRCS 167
G+QP WW MG C *QR *S R +S KH MV+HW R+L I D I Q K+RCS
Sbjct: 100 GNQPRWSWWIMGGACQ*QRF*SRRA*HSFKHRSMVYHW*RILHIRED*KNIXXQ*KYRCS 279
Query: 166 QDGGPLR*LSYWWCWCLQPRVLGHEHRRRK 77
+DG L +S W CW LQPR+LGHEHRRR+
Sbjct: 280 KDGNSLCQVSSWRCWYLQPRILGHEHRRRE 369
Score = 106 bits (227), Expect = 9e-023
Identities = 52/100 (52%), Positives = 62/100 (62%)
Frame = +3 / -2
Query: 81 LLLCSCPKTLGCKHQHHQ*DNYRKGPPS*EQRCFD*NMMYDRSPQIQRSRLQ*WTMGQCL 260
LLLCSCP+ LGCK+QH Q D + K PS EQR F M+ +S +I R R Q* TM CL
Sbjct: 365 LLLCSCPRILGCKYQHRQLDTWHKEFPSLEQRYFYCXXMFFQSSRIWRIRHQ**TMDLCL 186
Query: 261 MEYGGLQLQTLCY*QVQPICHQPLHG*SPQRRSRTVYQGS 380
E L+LQ LCY*Q PI HQ G* P S+ ++GS
Sbjct: 185 KECQALRLQNLCY*QAPPIIHQLQRG*FPXXXSQRGFEGS 66
>gb|CA029433.1|CA029433 HZ65D06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65D06
5-PRIME, mRNA sequence
Length = 642
Score = 208 bits (448), Expect = 3e-053
Identities = 79/103 (76%), Positives = 93/103 (90%)
Frame = -1 / +3
Query: 309 ELVSNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTG 130
ELVSN+GFEAGG HTPSNIDPWSIIGD+SS++V+T+RTSCFSRNIVALRME+LC CP G
Sbjct: 3 ELVSNKGFEAGGPHTPSNIDPWSIIGDESSIYVKTERTSCFSRNIVALRMEILCAKCPAG 182
Query: 129 GVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
GVG+YNPGFWGMNIEEGK YNLVM+++S E+ +L SLT S+G
Sbjct: 183 GVGIYNPGFWGMNIEEGKSYNLVMYIRSLESVELAASLTCSDG 311
Score = 161 bits (347), Expect = 3e-039
Identities = 74/103 (71%), Positives = 79/103 (76%)
Frame = +2 / -3
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMF 181
P E VSE S S DL ITRL* FPSSMFMPQNPGL* PTPP G L+QR SILRAT+F
Sbjct: 310 PSEHVSEAANSTDSSDLIYITRL*LFPSSMFMPQNPGL*IPTPPAGHLAQRISILRATIF 131
Query: 182 RLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSS 310
LK DV SV T E+SSPM+DHGSMF+GV PPAS PLLLTSS
Sbjct: 130 LLKQDVLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSS 2
Score = 117 bits (250), Expect = 6e-026
Identities = 48/83 (57%), Positives = 59/83 (71%)
Frame = +1 / -2
Query: 58 HNKIVDLSFFYVHAPKPWVVNTNTTSRTIIAKDLHPESNDVSTET*CTIGLHKYRGVVSN 237
H +I+ L FFYVHAP+ WVVNTNT S T+ K+ HP SND+STET C+ LH Y G V+N
Sbjct: 254 HYQIIALPFFYVHAPESWVVNTNTASWTLGTKNFHP*SNDISTETRCSFSLHVYGGFVTN 75
Query: 238 DGPWVNV*WSMEASSFKPSVTNK 306
D PW+ V* S+ S FK VT+K
Sbjct: 74 DRPWIYV*RSVRPSGFKTFVTDK 6
Score = 106 bits (227), Expect = 9e-023
Identities = 51/97 (52%), Positives = 63/97 (64%)
Frame = -3 / +2
Query: 304 C**QRV*SWRPPYSIKH*PMVHHWRRLLCICGDRSYIMFQSKHRCSQDGGPLR*LSYWWC 125
C *QR *S R +S KH MV+HW R+L I D I+FQ K+RCS+DG L +S W C
Sbjct: 8 CQ*QRF*SRRASHSFKHRSMVYHW*RILHIRED*KNILFQ*KYRCSKDGNSLCQVSSWRC 187
Query: 124 WCLQPRVLGHEHRRRKGLQSCYVC*VTRNN*LDSFTN 14
W LQPR+LGHEHRRR+ L S V +TR + FT+
Sbjct: 188 WYLQPRILGHEHRRREEL*SGNVYQITRIRGVSCFTH 298
>gb|CA024152.1|CA024152 HZ48I02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48I02
5-PRIME, mRNA sequence
Length = 463
Score = 199 bits (429), Expect = 1e-050
Identities = 81/107 (75%), Positives = 92/107 (85%)
Frame = -1 / +1
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L GC LA+E+E QTA L VD S + ARKIP TLFG+FFEEINHAGAGG+WAELV
Sbjct: 142 LLSLSCGCLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELV 321
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRM 160
SN+GFEAGG HTPSNIDPWSIIGD+SS++V+T+RTSCFSRNIVALRM
Sbjct: 322 SNKGFEAGGPHTPSNIDPWSIIGDESSIYVKTERTSCFSRNIVALRM 462
Score = 138 bits (297), Expect = 2e-032
Identities = 66/124 (53%), Positives = 80/124 (64%)
Frame = +2 / -3
Query: 161 ILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWL 340
ILRAT+F LK DV SV T E+SSPM+DHGSMF+GV PPAS PLLLTSSAH PPAPAWL
Sbjct: 461 ILRATIFLLKQDVLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSSAHNPPAPAWL 282
Query: 341 ISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQSRNKKRRRTARGAASLL 520
ISSK P V GIF A+ + ST AV S+S A P + + + + +
Sbjct: 281 ISSKNKPKRV*GIFLAAFHDVSTCSSAV*APSSSAASARHPQLNERRSKEQRMACKVAAS 102
Query: 521 VIPI 532
++PI
Sbjct: 101 LLPI 90
Score = 91.8 bits (194), Expect(2) = 2e-021
Identities = 40/78 (51%), Positives = 51/78 (65%)
Frame = +1 / -2
Query: 160 HPESNDVSTET*CTIGLHKYRGVVSNDGPWVNV*WSMEASSFKPSVTNKFSPYATSPCMV 339
HP SND+STET C+ LH Y G V+ND PW+ V* S+ S FK VT+K P +TS +V
Sbjct: 462 HP*SNDISTETRCSFSLHVYGGFVTNDRPWIYV*RSVRPSGFKTFVTDKLRP*STSSSVV 283
Query: 340 DLLKEDPEQCIRDLPSKL 393
D LKE ++ +RDL L
Sbjct: 282 DFLKEQAKEGLRDLSGGL 229
Score = 29.9 bits (59), Expect(2) = 2e-021
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2 / -3
Query: 431 ASTSDARHLQPMQSRNKKRRRTARGAASLLVI 526
+S + ARH Q + R+K++R + AASLL I
Sbjct: 185 SSAASARHPQLNERRSKEQRMACKVAASLLPI 90
>gb|BF627539.2|BF627539 HVSMEb0005C01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005C01f, mRNA sequence
Length = 789
Score = 196 bits (423), Expect = 8e-050
Identities = 82/110 (74%), Positives = 92/110 (83%)
Frame = -1 / +3
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L C GCKC+ASE++ATQTATL VDAS QLARKIPDTLFG+FFEEINHA AGGIWAELV
Sbjct: 147 LLLFCFGCKCIASELQATQTATLKVDASSQLARKIPDTLFGMFFEEINHA*AGGIWAELV 326
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVL 151
S+RGFEAGGLH P N+DPWSI+GDDS + V TDRT C S +I RM+ L
Sbjct: 327 SDRGFEAGGLHAPWNMDPWSIVGDDSFICVVTDRT*CRSLSIGRRRMDGL 476
Score = 185 bits (399), Expect = 2e-046
Identities = 79/107 (73%), Positives = 87/107 (81%)
Frame = +2 / -3
Query: 158 SILRATMFRLKHDVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAW 337
SILR M RL+H VRSV+T+ +ESSP +DHGS+F G W PPASNPL LTSSAHMPPA AW
Sbjct: 469 SILRRPMLRLRHHVRSVTTHMKESSPTIDHGSIFHGAWSPPASNPLSLTSSAHMPPAHAW 290
Query: 338 LISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQSRN 478
LISSK IPNSVSGIFRASC EAST RVAV VA SDA HL P Q+R+
Sbjct: 289 LISSKNIPNSVSGIFRASCDEASTLRVAVCVACNSDAMHLHPKQNRS 149
Score = 118 bits (253), Expect = 2e-026
Identities = 47/103 (45%), Positives = 68/103 (66%)
Frame = +1 / -2
Query: 100 PKPWVVNTNTTSRTIIAKDLHPESNDVSTET*CTIGLHKYRGVVSNDGPWVNV*WSMEAS 279
P+P + + + ++A+ +HP + + T T C I H Y VV+N PWV++ W ME+S
Sbjct: 527 PRPQGCSWRSHASPVMAQPVHPPTTNAQTATSCAISHHTYERVVANYRPWVHIPWCMESS 348
Query: 280 SFKPSVTNKFSPYATSPCMVDLLKEDPEQCIRDLPSKLRRGVH 408
SFKPS+T+KF PYAT CMVDLLK+ P+QC+ L KL G++
Sbjct: 347 SFKPSITHKFCPYATGSCMVDLLKKHPKQCVWYLSGKL**GIN 219
Score = 107 bits (229), Expect = 5e-023
Identities = 45/81 (55%), Positives = 58/81 (71%)
Frame = -3 / +2
Query: 400 LAAACSEDP*YTVRDLL*GDQPCRGWWHMG*TC**QRV*SWRPPYSIKH*PMVHHWRRLL 221
L AC +D +TV D+ *GDQPC WHMG TC * RV*SWR P ++++ PMV+ WRRL
Sbjct: 227 LITACPKDTRHTVWDVF*GDQPCMSRWHMGRTCE**RV*SWRTPCTMEYGPMVYSWRRLF 406
Query: 220 CICGDRSYIMFQSKHRCSQDG 158
+CGD S++M QS+H S+DG
Sbjct: 407 HMCGD*SHMMSQSEHWSSEDG 469
>gb|CA029014.1|CA029014 HZ63P04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ63P04
5-PRIME, mRNA sequence
Length = 379
Score = 187 bits (403), Expect(2) = 8e-050
Identities = 70/92 (76%), Positives = 83/92 (90%)
Frame = -1 / +1
Query: 276 GLHTPSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVGVYNPGFWG 97
GLHTPSNIDPWSIIGD+SS++V+T+RTSCFSRNIVALRME+LC CP GGVG+YNPGFWG
Sbjct: 37 GLHTPSNIDPWSIIGDESSIYVKTERTSCFSRNIVALRMEILCAKCPAGGVGIYNPGFWG 216
Query: 96 MNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
MNIEEGK YNLVM+++S E+ +L SLT S+G
Sbjct: 217 MNIEEGKSYNLVMYIRSLESVELAASLTCSDG 312
Score = 144 bits (309), Expect(2) = 2e-036
Identities = 65/92 (70%), Positives = 70/92 (76%)
Frame = +2 / -3
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMF 181
P E VSE S S DL ITRL* FPSSMFMPQNPGL* PTPP G L+QR SILRAT+F
Sbjct: 311 PSEHVSEAANSTDSSDLIYITRL*LFPSSMFMPQNPGL*IPTPPAGHLAQRISILRATIF 132
Query: 182 RLKHDVRSVSTNTEESSPMMDHGSMFDGVWRP 277
LK DV SV T E+SSPM+DHGSMF+GV RP
Sbjct: 131 LLKQDVLSVFTYMEDSSPMIDHGSMFEGVXRP 36
Score = 106 bits (227), Expect = 9e-023
Identities = 43/73 (58%), Positives = 53/73 (72%)
Frame = +1 / -2
Query: 58 HNKIVDLSFFYVHAPKPWVVNTNTTSRTIIAKDLHPESNDVSTET*CTIGLHKYRGVVSN 237
H +I+ L FFYVHAP+ WVVNTNT S T+ K+ HP SND+STET C+ LH Y G V+N
Sbjct: 255 HYQIIALPFFYVHAPESWVVNTNTASWTLGTKNFHP*SNDISTETRCSFSLHVYGGFVTN 76
Query: 238 DGPWVNV*WSMEA 276
D PW+ V* S+ A
Sbjct: 75 DRPWIYV*RSVXA 37
Score = 29.5 bits (58), Expect(2) = 8e-050
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -1 / +3
Query: 309 ELVSNRGFEAGG 274
ELVSN+GFEAGG
Sbjct: 3 ELVSNKGFEAGG 38
Score = 27.6 bits (54), Expect(2) = 2e-036
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / -1
Query: 275 PPASNPLLLTSS 310
PPAS PLLLTSS
Sbjct: 37 PPASKPLLLTSS 2
>gb|CA028957.1|CA028957 HZ63L22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ63L22
5-PRIME, mRNA sequence
Length = 390
Score = 188 bits (406), Expect = 2e-047
Identities = 75/84 (89%), Positives = 79/84 (94%)
Frame = -1 / +3
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L C GCKC+ASE++ATQTATL VDAS QLARKIPDTLFG+FFEEINHAGAGGIWAELV
Sbjct: 138 LLLFCFGCKCIASELQATQTATLKVDASSQLARKIPDTLFGMFFEEINHAGAGGIWAELV 317
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGD 229
SNRGFEAGGLHTPSNIDPWSIIGD
Sbjct: 318 SNRGFEAGGLHTPSNIDPWSIIGD 389
Score = 163 bits (350), Expect = 1e-039
Identities = 67/83 (80%), Positives = 72/83 (86%)
Frame = +2 / -3
Query: 230 SPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEAST 409
SP++DHGS+FDGVW PPAS PLLLTSSAHMPPAPAWLISSK IPNSVSGIFRASC EAST
Sbjct: 388 SPIIDHGSIFDGVWSPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGIFRASCDEAST 209
Query: 410 ARVAVWVASTSDARHLQPMQSRN 478
RVAV VA SDA HL P Q+R+
Sbjct: 208 LRVAVCVACNSDAMHLHPKQNRS 140
>gb|CA024885.1|CA024885 HZ50J14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50J14
5-PRIME, mRNA sequence
Length = 417
Score = 173 bits (373), Expect = 7e-043
Identities = 70/96 (72%), Positives = 81/96 (84%)
Frame = -1 / +3
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L GC LA+E+E QTA L VD S + ARKIP TLFG+FFEEINHAGAGG+WAELV
Sbjct: 129 LLSLSCGCLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELV 308
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTS 193
SN+GFEAGG HTPSNIDPWSIIGD+SS++V+T+RTS
Sbjct: 309 SNKGFEAGGPHTPSNIDPWSIIGDESSIYVKTERTS 416
Score = 122 bits (261), Expect = 2e-027
Identities = 58/113 (51%), Positives = 71/113 (62%)
Frame = +2 / -3
Query: 194 DVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVS 373
DV SV T E+SSPM+DHGSMF+GV PPAS PLLLTSSAH PPAPAWLISSK P V
Sbjct: 415 DVLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSSAHNPPAPAWLISSKNKPKRV* 236
Query: 374 GIFRASCGEASTARVAVWVASTSDARHLQPMQSRNKKRRRTARGAASLLVIPI 532
GIF A+ + ST AV S+S A P + + + + + ++PI
Sbjct: 235 GIFLAAFHDVSTCSSAV*APSSSAASARHPQLNERRSKEQRMACKVAASLLPI 77
>gb|CA026435.1|CA026435 HZ55O15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55O15
5-PRIME, mRNA sequence
Length = 438
Score = 173 bits (373), Expect = 7e-043
Identities = 70/96 (72%), Positives = 81/96 (84%)
Frame = -1 / +2
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L GC LA+E+E QTA L VD S + ARKIP TLFG+FFEEINHAGAGG+WAELV
Sbjct: 149 LLSLSCGCLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELV 328
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRTS 193
SN+GFEAGG HTPSNIDPWSIIGD+SS++V+T+RTS
Sbjct: 329 SNKGFEAGGPHTPSNIDPWSIIGDESSIYVKTERTS 436
Score = 122 bits (261), Expect = 2e-027
Identities = 58/113 (51%), Positives = 71/113 (62%)
Frame = +2 / -1
Query: 194 DVRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVS 373
DV SV T E+SSPM+DHGSMF+GV PPAS PLLLTSSAH PPAPAWLISSK P V
Sbjct: 435 DVLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSSAHNPPAPAWLISSKNKPKRV* 256
Query: 374 GIFRASCGEASTARVAVWVASTSDARHLQPMQSRNKKRRRTARGAASLLVIPI 532
GIF A+ + ST AV S+S A P + + + + + ++PI
Sbjct: 255 GIFLAAFHDVSTCSSAV*APSSSAASARHPQLNERRSKEQRMACKVAASLLPI 97
>gb|BI952689.1|BI952689 HVSMEm0007G12f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0007G12f, mRNA sequence
Length = 417
Score = 169 bits (364), Expect = 1e-041
Identities = 68/95 (71%), Positives = 79/95 (83%)
Frame = -1 / +3
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L GC LA+E+E TA L VD S + ARKIP TLFG+FFEEINHAGAGG+WAELV
Sbjct: 132 LLSLSCGCLALAAELEGAHTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELV 311
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDRT 196
SN+GFEAGG HTPSNIDPWSIIGD+SS++V+T+RT
Sbjct: 312 SNKGFEAGGPHTPSNIDPWSIIGDESSIYVKTERT 416
Score = 119 bits (255), Expect = 1e-026
Identities = 57/112 (50%), Positives = 70/112 (62%)
Frame = +2 / -3
Query: 197 VRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVSG 376
V SV T E+SSPM+DHGSMF+GV PPAS PLLLTSSAH PPAPAWLISSK P V G
Sbjct: 415 VLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSSAHNPPAPAWLISSKNKPKRV*G 236
Query: 377 IFRASCGEASTARVAVWVASTSDARHLQPMQSRNKKRRRTARGAASLLVIPI 532
IF A+ + ST AV S+S A P + + + + + ++PI
Sbjct: 235 IFLAAFHDVSTCSSAV*APSSSAASARHPQLNERRSKEQRMACKVAASLLPI 80
>gb|CA020538.1|CA020538 HZ36J20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36J20
5-PRIME, mRNA sequence
Length = 416
Score = 169 bits (364), Expect = 1e-041
Identities = 68/94 (72%), Positives = 79/94 (84%)
Frame = -1 / +1
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L GC LA+E+E QTA L VD S + ARKIP TLFG+FFEEINHAGAGG+WAELV
Sbjct: 133 LLSLSCGCLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELV 312
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVETDR 199
SN+GFEAGG HTPSNIDPWSIIGD+SS++V+T+R
Sbjct: 313 SNKGFEAGGPHTPSNIDPWSIIGDESSIYVKTER 414
Score = 119 bits (255), Expect = 1e-026
Identities = 57/112 (50%), Positives = 70/112 (62%)
Frame = +2 / -1
Query: 197 VRSVSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVSG 376
V SV T E+SSPM+DHGSMF+GV PPAS PLLLTSSAH PPAPAWLISSK P V G
Sbjct: 416 VLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSSAHNPPAPAWLISSKNKPKRV*G 237
Query: 377 IFRASCGEASTARVAVWVASTSDARHLQPMQSRNKKRRRTARGAASLLVIPI 532
IF A+ + ST AV S+S A P + + + + + ++PI
Sbjct: 236 IFLAAFHDVSTCSSAV*APSSSAASARHPQLNERRSKEQRMACKVAASLLPI 81
>gb|CA024147.1|CA024147 HZ48H21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48H21
5-PRIME, mRNA sequence
Length = 428
Score = 166 bits (357), Expect = 1e-040
Identities = 67/92 (72%), Positives = 77/92 (83%)
Frame = -1 / +2
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIWAELV 301
L L GC LA+E+E QTA L VD S + ARKIP TLFG+FFEEINHAGAGG+WAELV
Sbjct: 152 LLSLSCGCLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAELV 331
Query: 300 SNRGFEAGGLHTPSNIDPWSIIGDDSSVFVET 205
SN+GFEAGG HTPSNIDPWSIIGD+SS++V+T
Sbjct: 332 SNKGFEAGGPHTPSNIDPWSIIGDESSIYVKT 427
Score = 116 bits (249), Expect = 8e-026
Identities = 55/109 (50%), Positives = 68/109 (62%)
Frame = +2 / -3
Query: 206 VSTNTEESSPMMDHGSMFDGVWRPPASNPLLLTSSAHMPPAPAWLISSKKIPNSVSGIFR 385
V T E+SSPM+DHGSMF+GV PPAS PLLLTSSAH PPAPAWLISSK P V GIF
Sbjct: 426 VFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSSAHNPPAPAWLISSKNKPKRV*GIFL 247
Query: 386 ASCGEASTARVAVWVASTSDARHLQPMQSRNKKRRRTARGAASLLVIPI 532
A+ + ST AV S+S A P + + + + + ++PI
Sbjct: 246 AAFHDVSTCSSAV*APSSSAASARHPQLNERRSKEQRMACKVAASLLPI 100
>gb|BM100077.2|BM100077 EBma01_SQ001_B24_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ001_B24 5', mRNA sequence
Length = 223
Score = 162 bits (348), Expect = 2e-039
Identities = 59/73 (80%), Positives = 69/73 (94%)
Frame = -1 / +3
Query: 264 PSNIDPWSIIGDDSSVFVETDRTSCFSRNIVALRMEVLCDNCPTGGVGVYNPGFWGMNIE 85
PSNIDPWSIIGD+SS++V+T+RTSCFSRNIVALRME+LC CP GGVG+YNPGFWGMNIE
Sbjct: 3 PSNIDPWSIIGDESSIYVKTERTSCFSRNIVALRMEILCAKCPAGGVGIYNPGFWGMNIE 182
Query: 84 EGKVYNLVMFVKS 46
EGK YNLVM+++S
Sbjct: 183 EGKSYNLVMYIRS 221
Score = 126 bits (270), Expect = 1e-028
Identities = 55/73 (75%), Positives = 60/73 (82%)
Frame = +2 / -1
Query: 47 DLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATMFRLKHDVRSVSTNTEE 226
DL ITRL* FPSSMFMPQNPGL* PTPP G L+QR SILRAT+F LK DV SV T E+
Sbjct: 220 DLIYITRL*LFPSSMFMPQNPGL*IPTPPAGHLAQRISILRATIFLLKQDVLSVFTYMED 41
Query: 227 SSPMMDHGSMFDG 265
SSPM+DHGSMF+G
Sbjct: 40 SSPMIDHGSMFEG 2
Score = 104 bits (222), Expect = 4e-022
Identities = 41/68 (60%), Positives = 50/68 (73%)
Frame = +1 / -3
Query: 58 HNKIVDLSFFYVHAPKPWVVNTNTTSRTIIAKDLHPESNDVSTET*CTIGLHKYRGVVSN 237
H +I+ L FFYVHAP+ WVVNTNT S T+ K+ HP SND+STET C+ LH Y G V+N
Sbjct: 209 HYQIIALPFFYVHAPESWVVNTNTASWTLGTKNFHP*SNDISTETRCSFSLHVYGGFVTN 30
Query: 238 DGPWVNV* 261
D PW+ V*
Sbjct: 29 DRPWIYV* 6
>gb|AW982740.2|AW982740 HVSMEg0004B07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0004B07f, mRNA sequence
Length = 605
Score = 118 bits (253), Expect(2) = 2e-032
Identities = 44/60 (73%), Positives = 53/60 (88%)
Frame = -1 / +2
Query: 180 NIVALRMEVLCDNCPTGGVGVYNPGFWGMNIEEGKVYNLVMFVKSPETTDLTVSLTSSNG 1
+I+AL+MEVLCD+CP GVG+YNPGFWGMNIE+GK YNLVM+VKS E +LTVSL SS+G
Sbjct: 53 DIIALKMEVLCDDCPASGVGIYNPGFWGMNIEDGKTYNLVMYVKSAEAAELTVSLASSDG 232
Score = 99.1 bits (210), Expect(2) = 2e-025
Identities = 45/59 (76%), Positives = 46/59 (77%)
Frame = +2 / -3
Query: 2 PLELVSETVKSVVSGDLTNITRL*TFPSSMFMPQNPGL*TPTPPVGQLSQRTSILRATM 178
P EL +ETV S S DLT ITRL* FPSSMFMPQNPGL* PTP GQ SQRTSILRA M
Sbjct: 231 PSELANETVNSAASADLTYITRL*VFPSSMFMPQNPGL*MPTPLAGQSSQRTSILRAIM 55
Score = 40.0 bits (81), Expect(2) = 2e-032
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -1 / +1
Query: 231 DDSSVFVETDRTSCFSR 181
DDSS+FV TDRTSCFSR
Sbjct: 1 DDSSIFVATDRTSCFSR 51
Score = 35.9 bits (72), Expect(2) = 2e-025
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3 / -2
Query: 180 FD*NMMYDRSPQIQRSR 230
FD*NMMYD+SPQI +SR
Sbjct: 52 FD*NMMYDQSPQIWKSR 2
>gb|CB883684.1|CB883684 HQ02P16w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02P16
3-PRIME, mRNA sequence
Length = 601
Score = 131 bits (281), Expect = 3e-030
Identities = 53/66 (80%), Positives = 57/66 (86%)
Frame = -1 / +3
Query: 492 LLRFLFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGAGGIW 313
+L FL L C+ CKCLASE E TQ A+L VD+SP LARKIPDTLFGIFFEEINHAGAGGIW
Sbjct: 402 ILCFLLLFCVSCKCLASEFEITQVASLGVDSSPHLARKIPDTLFGIFFEEINHAGAGGIW 581
Query: 312 AELVSN 295
AELVSN
Sbjct: 582 AELVSN 599
Score = 123 bits (263), Expect = 1e-027
Identities = 51/66 (77%), Positives = 56/66 (84%)
Frame = +2 / -1
Query: 293 LLLTSSAHMPPAPAWLISSKKIPNSVSGIFRASCGEASTARVAVWVASTSDARHLQPMQS 472
LLLTSSAH+PPAPAWLISSK IPNSVSGIFRA CGE ST R+A WV S SDA+HLQ Q
Sbjct: 601 LLLTSSAHIPPAPAWLISSKNIPNSVSGIFRARCGEESTPRLATWVISNSDAKHLQLTQK 422
Query: 473 RNKKRR 490
R+KK+R
Sbjct: 421 RSKKQR 404
>gb|AV923522.1|AV923522 AV923522 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13h16 5', mRNA sequence
Length = 270
Score = 107 bits (228), Expect = 7e-023
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = -1 / +3
Query: 480 LFLLCIGCKCLASEVEATQTATLAVDASPQLARKIPDTLFGIFFEEINHAGA 325
L L C GCKC+ASE++ATQTATL VDAS QLARKIPDTLFG+FFEEINHAGA
Sbjct: 114 LLLFCFGCKCIASELQATQTATLKVDASSQLARKIPDTLFGMFFEEINHAGA 269
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 368,032,005
Number of Sequences: 312970
Number of extensions: 6704225
Number of successful extensions: 89080
Number of sequences better than 1.0e-020: 25
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6913923567
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)