TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3311938.2.1
(1003 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ753409.1|BQ753409 EBan01_SQ004_D03_R anther, yellow st... 236 2e-074
gb|BE230894.2|BE230894 HVSMEg0001I02f Hordeum vulgare pre-a... 230 4e-067
gb|BQ468475.1|BQ468475 HM01F21T HM Hordeum vulgare subsp. v... 226 8e-067
gb|CB883976.1|CB883976 HM06N05r HM Hordeum vulgare subsp. v... 226 8e-067
gb|BU995044.1|BU995044 HM09A07r HM Hordeum vulgare subsp. v... 236 7e-066
gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedl... 107 7e-066
gb|BQ469137.1|BQ469137 HM03I08r HM Hordeum vulgare subsp. v... 226 3e-065
gb|BQ764421.1|BQ764421 EBan01_SQ005_G21_R anther, yellow st... 239 5e-065
gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachi... 191 3e-063
gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedl... 189 8e-060
gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachi... 193 2e-059
gb|CB884030.1|CB884030 HM10H05r HM Hordeum vulgare subsp. v... 226 2e-058
gb|CB884057.1|CB884057 HM12C11r HM Hordeum vulgare subsp. v... 226 2e-058
gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgar... 175 1e-056
gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 ... 193 1e-055
gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachi... 193 2e-054
gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. v... 193 2e-054
gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm libra... 105 3e-054
gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm librar... 105 3e-054
gb|BQ764220.1|BQ764220 EBan01_SQ005_P04_R anther, yellow st... 211 4e-054
gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachi... 193 4e-054
gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachi... 188 4e-054
gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgar... 146 4e-054
gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachi... 193 6e-054
gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachi... 193 2e-053
gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgar... 175 5e-053
gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedl... 160 7e-053
gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachi... 193 7e-053
gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm librar... 105 5e-052
gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. v... 105 5e-052
gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. v... 105 5e-052
gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DA... 193 1e-051
gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library... 105 2e-051
gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachi... 189 2e-051
gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachi... 190 1e-050
gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, dro... 188 4e-049
gb|BQ753618.1|BQ753618 EBan01_SQ004_M07_R anther, yellow st... 193 1e-048
gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DA... 193 2e-048
gb|CA022206.1|CA022206 HZ42H09r HZ Hordeum vulgare subsp. v... 193 2e-048
gb|CV063456.1|CV063456 BNEL8E2 Barley EST endosperm library... 105 3e-048
gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. v... 175 2e-047
gb|CA022237.1|CA022237 HZ42I19r HZ Hordeum vulgare subsp. v... 189 2e-047
gb|CA023986.1|CA023986 HZ48A15r HZ Hordeum vulgare subsp. v... 189 2e-047
gb|BM442635.2|BM442635 EBan01_SQ003_L19_R anther, yellow st... 134 3e-047
gb|BI956858.1|BI956858 HVSMEn0005K24f Hordeum vulgare rachi... 123 5e-047
gb|BI959378.1|BI959378 HVSMEn0019H04f Hordeum vulgare rachi... 188 6e-047
gb|CV060955.1|CV060955 BNEL63c5 Barley EST endosperm librar... 99 6e-047
gb|AV923254.1|AV923254 AV923254 K. Sato unpublished cDNA li... 187 8e-047
gb|AL504600.1|AL504600 AL504600 Hordeum vulgare Barke roots... 95 1e-046
gb|CV061225.1|CV061225 BNEL66d10 Barley EST endosperm libra... 105 6e-046
gb|CB881182.1|CB881182 HM09A07w HM Hordeum vulgare subsp. v... 123 7e-046
gb|CV054400.1|CV054400 BNEL10B12 Barley EST endosperm libra... 105 7e-046
gb|BU981754.1|BU981754 HA24I17r HA Hordeum vulgare subsp. v... 105 7e-046
gb|BI949344.1|BI949344 HVSMEl0013G22f Hordeum vulgare spike... 105 7e-046
gb|BF256653.2|BF256653 HVSMEf0010J19f Hordeum vulgare seedl... 175 1e-045
gb|BU993991.1|BU993991 HM05E17r HM Hordeum vulgare subsp. v... 183 1e-045
gb|BI957183.1|BI957183 HVSMEn0007P24f Hordeum vulgare rachi... 182 2e-045
gb|BI960089.1|BI960089 HVSMEn0023C15f Hordeum vulgare rachi... 177 6e-045
gb|BQ758707.1|BQ758707 EBma07_SQ002_G16_R maternal, 21 DPA,... 179 2e-044
gb|BQ764067.1|BQ764067 EBro03_SQ006_N05_R root, 3 week, wat... 105 3e-044
gb|BF259343.2|BF259343 HVSMEf0019F11f Hordeum vulgare seedl... 172 1e-043
gb|AL507275.1|AL507275 AL507275 Hordeum vulgare Barke devel... 160 1e-043
gb|BG310251.1|BG310251 HVSMEc0016K12f Hordeum vulgare seedl... 177 1e-043
gb|BM372935.2|BM372935 EBma04_SQ002_H04_R maternal, 10 DPA,... 177 1e-043
gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgar... 169 2e-043
gb|BU980194.1|BU980194 HA18P06r HA Hordeum vulgare subsp. v... 175 4e-043
gb|CA031744.1|CA031744 HX11A03r HX Hordeum vulgare subsp. v... 175 4e-043
gb|CB882163.1|CB882163 HL01B01w HL Hordeum vulgare subsp. v... 175 4e-043
gb|BQ465138.1|BQ465138 HU02M06r HU Hordeum vulgare subsp. v... 160 5e-043
gb|BI957582.1|BI957582 HVSMEn0010D14f Hordeum vulgare rachi... 172 2e-042
gb|BI959812.1|BI959812 HVSMEn0021L03f Hordeum vulgare rachi... 160 9e-042
gb|BQ765573.1|BQ765573 EBro03_SQ007_F17_R root, 3 week, wat... 96 1e-041
gb|BQ753440.1|BQ753440 EBan01_SQ004_E11_R anther, yellow st... 170 1e-041
gb|BU978694.1|BU978694 HA14A06r HA Hordeum vulgare subsp. v... 169 2e-041
gb|BU981183.1|BU981183 HA22N23r HA Hordeum vulgare subsp. v... 99 2e-041
gb|BF625170.3|BF625170 HVSMEa0006D08f Hordeum vulgare seedl... 158 3e-041
gb|BE603113.3|BE603113 HVSMEh0101P24f Hordeum vulgare 5-45 ... 167 7e-041
gb|BI950777.1|BI950777 HVSMEl0023C15f Hordeum vulgare spike... 73 9e-041
gb|CV054086.1|CV054086 BNEL106e9 Barley EST endosperm libra... 100 4e-039
gb|BQ753385.1|BQ753385 EBan01_SQ004_C01_R anther, yellow st... 161 6e-039
gb|CA018998.1|CA018998 HV10G08r HV Hordeum vulgare subsp. v... 95 4e-038
gb|BF618493.2|BF618493 HVSMEc0005N13f Hordeum vulgare seedl... 157 8e-038
gb|CK124612.1|CK124612 BES1824109m10 BES1824 Hordeum vulgar... 157 8e-038
gb|BJ463021.1|BJ463021 BJ463021 K. Sato unpublished cDNA li... 67 9e-038
gb|AV917139.1|AV917139 AV917139 K. Sato unpublished cDNA li... 98 4e-037
gb|CW512145.1|CW512145 ToNAR_Morex_118b Morex Exon trapped ... 115 5e-037
gb|BQ759881.1|BQ759881 EBpi05_SQ004_P16_R pistil, 8 DPA, no... 101 8e-037
gb|BM097618.2|BM097618 EBem04_SQ002_D15_R embryo, 12 DPA, n... 109 1e-036
gb|BQ469285.1|BQ469285 HM03P13r HM Hordeum vulgare subsp. v... 151 5e-036
gb|BI960393.1|BI960393 HVSMEn0024H07f Hordeum vulgare rachi... 150 1e-035
gb|BU967134.1|BU967134 HB03G05r BC Hordeum vulgare subsp. v... 105 6e-035
gb|BE060246.3|BE060246 HVSMEg0011L08f Hordeum vulgare pre-a... 80 2e-034
gb|BI956518.1|BI956518 HVSMEn0003O09f Hordeum vulgare rachi... 144 8e-034
gb|CA019796.1|CA019796 HV13D05r HV Hordeum vulgare subsp. v... 142 4e-033
gb|CV058074.1|CV058074 BNEL34a7 Barley EST endosperm librar... 70 6e-033
gb|BG368109.2|BG368109 HVSMEi0015L12f Hordeum vulgare 20 DA... 67 2e-032
gb|BG368652.1|BG368652 HVSMEi0020B24f Hordeum vulgare 20 DA... 67 2e-032
gb|BF260026.3|BF260026 HVSMEf0020O13f Hordeum vulgare seedl... 98 2e-031
gb|CB884040.1|CB884040 HM11B07r HM Hordeum vulgare subsp. v... 135 4e-031
gb|BF257093.3|BF257093 HVSMEf0011N11f Hordeum vulgare seedl... 67 6e-031
gb|CA004554.1|CA004554 HS17P08r HS Hordeum vulgare subsp. v... 133 1e-030
gb|BG368126.2|BG368126 HVSMEi0015M21f Hordeum vulgare 20 DA... 67 5e-030
gb|BI959328.1|BI959328 HVSMEn0019E09f Hordeum vulgare rachi... 129 3e-029
gb|BI958795.1|BI958795 HVSMEn0016K11f Hordeum vulgare rachi... 128 4e-029
gb|CB883447.1|CB883447 HQ02E17w HQ Hordeum vulgare subsp. v... 111 8e-029
gb|BE454367.2|BE454367 HVSMEh0093N18f Hordeum vulgare 5-45 ... 85 1e-028
gb|BM442090.2|BM442090 EBan01_SQ002_C16_R anther, yellow st... 122 1e-028
gb|BI957249.1|BI957249 HVSMEn0008G13f Hordeum vulgare rachi... 126 2e-028
gb|CV055940.1|CV055940 BNEL12B5 Barley EST endosperm librar... 74 6e-028
gb|CA019924.1|CA019924 HV13L18r HV Hordeum vulgare subsp. v... 67 9e-028
gb|BI957226.1|BI957226 HVSMEn0008D17f Hordeum vulgare rachi... 124 9e-028
gb|BU980984.1|BU980984 HA22E18r HA Hordeum vulgare subsp. v... 57 9e-028
gb|BF253787.2|BF253787 HVSMEf0002C01f Hordeum vulgare seedl... 89 2e-027
gb|CB882255.1|CB882255 HL01F14w HL Hordeum vulgare subsp. v... 122 2e-027
gb|CB881625.1|CB881625 HM10G06w HM Hordeum vulgare subsp. v... 71 3e-027
gb|CV061235.1|CV061235 BNEL66d9 Barley EST endosperm librar... 99 5e-027
gb|BE193443.3|BE193443 HVSMEh0081A10f Hordeum vulgare 5-45 ... 67 1e-026
gb|CA004842.1|CA004842 HS18N14r HS Hordeum vulgare subsp. v... 120 2e-026
gb|BI954215.1|BI954215 HVSMEm0016K09f Hordeum vulgare green... 118 4e-026
gb|BI956468.1|BI956468 HVSMEn0003I18f Hordeum vulgare rachi... 117 8e-026
gb|BM098205.2|BM098205 EBpi03_SQ002_N14_R pistil, 4 DPA, no... 57 2e-025
gb|BU983094.1|BU983094 HA28I14r HA Hordeum vulgare subsp. v... 68 3e-025
gb|AV928430.1|AV928430 AV928430 K. Sato unpublished cDNA li... 98 1e-024
gb|BQ459308.1|BQ459308 HA01I15r HA Hordeum vulgare subsp. v... 73 1e-024
gb|BQ753555.1|BQ753555 EBan01_SQ004_J12_R anther, yellow st... 102 2e-024
gb|BU983370.1|BU983370 HA29H20r HA Hordeum vulgare subsp. v... 64 1e-023
gb|BI958556.1|BI958556 HVSMEn0015J19f Hordeum vulgare rachi... 67 2e-023
gb|BF257559.2|BF257559 HVSMEf0013D22f Hordeum vulgare seedl... 68 3e-023
gb|BQ459628.1|BQ459628 HA08J01r HA Hordeum vulgare subsp. v... 62 1e-022
gb|BQ760850.1|BQ760850 EBro03_SQ003_K11_R root, 3 week, wat... 105 3e-022
gb|BG369116.2|BG369116 HVSMEi0021M10f Hordeum vulgare 20 DA... 52 4e-022
gb|BF259315.3|BF259315 HVSMEf0019E07f Hordeum vulgare seedl... 73 2e-021
gb|CB880524.1|CB880524 HM06N05w HM Hordeum vulgare subsp. v... 71 3e-021
gb|BQ661443.1|BQ661443 HM03I08u HM Hordeum vulgare subsp. v... 71 7e-021
gb|AV917082.1|AV917082 AV917082 K. Sato unpublished cDNA li... 86 7e-021
>gb|BQ753409.1|BQ753409 EBan01_SQ004_D03_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ004_D03 5', mRNA sequence
Length = 677
Score = 236 bits (510), Expect(2) = 2e-074
Identities = 93/142 (65%), Positives = 107/142 (75%)
Frame = +3 / +2
Query: 126 GPPKVPPGKNITANYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGN 305
G KVP G NITANY S+W DAK TWYGKPT YK+V+KAPF M +CGN
Sbjct: 89 GIAKVPCGPNITANYVSEWKDAKTTWYGKPTGAGPKDNGGACGYKEVDKAPFFGMTSCGN 268
Query: 306 VPIFKDGLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKG 485
VPIFKD GCGSCFE+KC KP CSG+P +V ITD N EPIAAYHFDL+G AFG MAKKG
Sbjct: 269 VPIFKDSRGCGSCFELKCTKPGACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAKKG 448
Query: 486 EEEKLRKAGIIDMQFRRVKCKY 551
+E+KLR AG ++++FRRVKCKY
Sbjct: 449 QEQKLRDAGEVEIKFRRVKCKY 514
Score = 140 bits (301), Expect(2) = 4e-034
Identities = 64/104 (61%), Positives = 72/104 (69%)
Frame = -1 / -3
Query: 574 KWKVTLDPYLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYT 395
K+ + YLHLT RN +S PA R+F S PFLAM P A P RSKWYAAMGS F+SVM T
Sbjct: 537 KFTLVPSGYLHLTRRNLISTSPASRSFCSWPFLAMVPKAWPDRSKWYAAMGSSFLSVMVT 358
Query: 394 TTGLPEHSAGLSHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
G PE + GL HL SKQ+PQPR SLK+GTLP M KGAL T
Sbjct: 357 MVGSPEQAPGLVHLSSKQEPQPRLSLKMGTLPQEVMPKKGALST 226
Score = 100 bits (214), Expect(2) = 9e-027
Identities = 58/140 (41%), Positives = 76/140 (54%)
Frame = -3 / -2
Query: 551 ILALDPSKLHVNDARXXXXXXXXXLGHGTXXXXXXXXXXXRNGLVVHVCNVHHHGLARAL 372
+LALD ++L ++ A LGHG R+GL+V V + GLA A
Sbjct: 514 VLALDAAELDLHLAGVAQLLLLALLGHGAEGMAGQVEVVRRDGLLVLVGDGDDGGLAGAG 335
Query: 371 RWLVALDLEAGSTT*TILEDRDVATCAHAVERGLVHVLVPTSATIVVRAGTCWLAIPCCL 192
L AL+LEAG+ +LED DVA HA E GLVH+LVP A +V+ G LA+P L
Sbjct: 334 PGLGALELEAGAAAAAVLEDGDVAAGGHAEEGGLVHLLVPAGAAVVLGPGARRLAVPRRL 155
Query: 191 GI*PITTIVGCDVLTRGNLG 132
G+ P+ +V DV GNLG
Sbjct: 154 GVFPLADVVRRDVGATGNLG 95
Score = 95.9 bits (203), Expect(2) = 1e-025
Identities = 52/111 (46%), Positives = 67/111 (60%)
Frame = +2 / +1
Query: 134 QGSPG*EHHSQLW**LARCQGNMVWQANRCRPGRQWWRMWVQGREQGPFQQHGRMWQRPY 313
QGS +HH +L + R Q ++V QA+ R Q R+ VQG QGP +H + QRP+
Sbjct: 97 QGSLWPQHHGELRQRVERRQDDVVRQADGRRAQGQRRRLRVQGGGQGPLLRHDLLRQRPH 276
Query: 314 LQGWSRLWILLRDQVRQASGVLWQARGGVHYRHELRAHCGVPLRPSRHGVR 466
LQG RL +LLR QV QA G+L +A H+R E AH GVPLRP R +R
Sbjct: 277 LQGQPRLRLLLRAQVHQARGLLRRAHHRHHHRQERGAHRGVPLRPVRPCLR 429
Score = 74.8 bits (157), Expect(3) = 3e-029
Identities = 39/94 (41%), Positives = 44/94 (46%)
Frame = -2 / -1
Query: 387 ACQSTPLACRT*SRSRIHNLDHP*R*GRCHMRPCC*KGPCSRPCTHIRHHCRPGRHLLAC 208
A +S P A T*+RSR + P*R GRC R C +GPC PCT R C R AC
Sbjct: 350 ARRSRPRAWCT*ARSRSRSRGCP*RWGRCRRRSCRRRGPCPPPCTRRRRRCPWARRPSAC 171
Query: 207 HTMLPWHLANHYHSWL*CSYPGEPWEDHTRHRLP 106
T W L+ S *C EPW R P
Sbjct: 170 RTTSSWRLSTR*RSSP*CWGHREPWRCRARRTRP 69
Score = 63.8 bits (133), Expect(2) = 2e-074
Identities = 26/58 (44%), Positives = 34/58 (58%)
Frame = +3 / +2
Query: 534 RVKCKYGSKVTFHLEKGCNPNYLALLVKYXXXXXXXXXXXXKEKGSDTYEPLKHSWGA 707
+ K G+KV FH+EKG +PNYLAL++K+ K KG D + LK SWGA
Sbjct: 503 KCKYPEGTKVNFHVEKGSSPNYLALVIKFLQGDGDVVAVDIKPKGKDKWIELKESWGA 676
Score = 50.6 bits (104), Expect(3) = 3e-029
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = -2 / -1
Query: 501 ATSPPHPSWPWHRTPCLLGRSGTPQWARSSC 409
A S P PSWPW R GRSGTP+WA SC
Sbjct: 464 AASAPGPSWPWCRRHGRTGRSGTPRWAPRSC 372
Score = 41.4 bits (84), Expect(3) = 3e-029
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -3 / -2
Query: 656 DVHRHNVTISINVLDQQGQVVGVASLLQMEGDLRSILAL 540
DVH H+V +++ LD QG+VVG + L +E L ++ L
Sbjct: 625 DVHGHHVAVALEELDHQGEVVGAGAFLHVEVHLGALRVL 509
Score = 40.9 bits (83), Expect(2) = 1e-025
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +1 / +3
Query: 568 SIWRRDATPTTWPCWSSTLMEMVTLWRWTSRRRALTPTSL*STLGAP 708
S WR+ PTT P SS+ T W WTS RA T S + G P
Sbjct: 537 STWRKAPAPTTSPW*SSSSRATATWWPWTSSPRARTSGSSSRSRGEP 677
Score = 39.6 bits (80), Expect(2) = 9e-027
Identities = 22/58 (37%), Positives = 25/58 (43%)
Frame = -1 / -3
Query: 706 APQECFRGS*VSEPFXXXXXXXXXXXXXTYLTNRAR*LGLHPFSKWKVTLDPYLHLTL 533
AP + +S P L RAR*LGL PFS WK TL P +L L
Sbjct: 675 APHDSLSSIHLSLPLGLMSTATTSPSPWRNLITRAR*LGLEPFSTWKFTLVPSGYLHL 502
Score = 24.4 bits (47), Expect(2) = 4e-034
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2 / -1
Query: 618 T*PTGPGSWGCIPSPNGR*P 559
T* G GSWG SP G P
Sbjct: 587 T*SPGRGSWGWSLSPRGSSP 528
>gb|BE230894.2|BE230894 HVSMEg0001I02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0001I02f, mRNA sequence
Length = 606
Score = 230 bits (496), Expect(2) = 4e-067
Identities = 91/142 (64%), Positives = 106/142 (74%)
Frame = +3 / +1
Query: 126 GPPKVPPGKNITANYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGN 305
G KVP G NITA Y S+W DAK TWYGKPT YK+V+KAPF M +CGN
Sbjct: 64 GIAKVPCGPNITATYVSEWKDAKTTWYGKPTGAGPKDNGGACGYKEVDKAPFFGMTSCGN 243
Query: 306 VPIFKDGLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKG 485
VPIFKDG GCGSCFE+KC KP CSG+P +V ITD N EPIAAYHFDL+G AFG MAK+G
Sbjct: 244 VPIFKDGRGCGSCFELKCTKPEACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAKEG 423
Query: 486 EEEKLRKAGIIDMQFRRVKCKY 551
+ +KLR AG ++++FRRVKCKY
Sbjct: 424 Q*QKLRDAGEVEIKFRRVKCKY 489
Score = 139 bits (299), Expect(2) = 3e-035
Identities = 63/104 (60%), Positives = 72/104 (69%)
Frame = -1 / -2
Query: 574 KWKVTLDPYLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYT 395
K+ + YLHLT RN +S PA R+F P LAM P A P RSKWYAAMGS F+SVM T
Sbjct: 512 KFTLVPSGYLHLTRRNLISTSPASRSFCYWPSLAMVPKAWPDRSKWYAAMGSSFLSVMVT 333
Query: 394 TTGLPEHSAGLSHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
G PE ++GL HL SKQ+PQPRPSLK+GTLP M KGAL T
Sbjct: 332 MVGSPEQASGLVHLSSKQEPQPRPSLKMGTLPQEVMPKKGALST 201
Score = 96.4 bits (204), Expect(2) = 6e-026
Identities = 55/140 (39%), Positives = 73/140 (52%)
Frame = -3 / -1
Query: 551 ILALDPSKLHVNDARXXXXXXXXXLGHGTXXXXXXXXXXXRNGLVVHVCNVHHHGLARAL 372
+LALD ++L ++ A GHG R+GL+V V + GLA A
Sbjct: 489 VLALDAAELDLHLAGVAQLLLLAFFGHGAEGMAGQVEVVRRDGLLVLVGDGDDGGLAGAG 310
Query: 371 RWLVALDLEAGSTT*TILEDRDVATCAHAVERGLVHVLVPTSATIVVRAGTCWLAIPCCL 192
L AL+LEAG+ + ED DVA HA E GLVH+LVP A +V+ G LA+P L
Sbjct: 309 LGLGALELEAGAAAAAVFEDGDVAAGGHAEEGGLVHLLVPAGAAVVLGTGARRLAVPRRL 130
Query: 191 GI*PITTIVGCDVLTRGNLG 132
G+ P+ + DV GNLG
Sbjct: 129 GVFPLADVGRRDVGATGNLG 70
Score = 90.9 bits (192), Expect(2) = 3e-022
Identities = 51/111 (45%), Positives = 65/111 (58%)
Frame = +2 / +3
Query: 134 QGSPG*EHHSQLW**LARCQGNMVWQANRCRPGRQWWRMWVQGREQGPFQQHGRMWQRPY 313
QGS +HH L + R Q ++V QA+ R Q R+ VQG QGP +H + QRP+
Sbjct: 72 QGSLWPQHHGDLRQRVERRQDDVVRQADGRRSQGQRRRLRVQGGGQGPLLRHDLLRQRPH 251
Query: 314 LQGWSRLWILLRDQVRQASGVLWQARGGVHYRHELRAHCGVPLRPSRHGVR 466
LQ RL +LLR QV QA G+L +A H+R E AH GVPLRP R +R
Sbjct: 252 LQRRPRLRLLLRAQVHQARGLLRRAHHRHHHRQERGAHRGVPLRPVRPCLR 404
Score = 45.5 bits (93), Expect(2) = 4e-067
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +3 / +1
Query: 534 RVKCKYGSKVTFHLEKGCNPNYLALLVKY 620
+ K G+KV FH+EKG +PNYLAL+VK+
Sbjct: 478 KCKYPEGTKVNFHVEKGSSPNYLALVVKF 564
Score = 41.4 bits (84), Expect(2) = 6e-026
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = -1 / -2
Query: 616 LTNRAR*LGLHPFSKWKVTLDPYLHLTL 533
LT RAR*LGL PFS WK TL P +L L
Sbjct: 560 LTTRAR*LGLEPFSTWKFTLVPSGYLHL 477
Score = 34.5 bits (69), Expect(2) = 3e-022
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 560 GHLPFGEGMQPQLPGPVGQV 619
G LP GEG+QPQLP P QV
Sbjct: 504 GELPRGEGLQPQLPRPGCQV 563
Score = 29.0 bits (57), Expect(2) = 3e-035
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2 / -3
Query: 618 T*PTGPGSWGCIPSPNGR*P 559
T* G GSWG PSP G P
Sbjct: 562 T*QPGRGSWGWSPSPRGSSP 503
>gb|BQ468475.1|BQ468475 HM01F21T HM Hordeum vulgare subsp. vulgare cDNA clone HM01F21
5-PRIME, mRNA sequence
Length = 650
Score = 226 bits (487), Expect(2) = 8e-067
Identities = 86/139 (61%), Positives = 100/139 (71%)
Frame = +3 / +2
Query: 135 KVPPGKNITANYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPI 314
KVPPG NIT NY +W AKATWYGK T KDVN AP+N M ACGN+PI
Sbjct: 122 KVPPGPNITTNYNMNWTPAKATWYGKATGSGPKDNGGACGIKDVNLAPYNGMIACGNIPI 301
Query: 315 FKDGLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEE 494
FKDG GCGSC+E+KC+KP CS KP+ V+ITD NYEPIA YH DL+G AFGAMA G E+
Sbjct: 302 FKDGKGCGSCYEVKCNKPPPCSDKPITVFITDKNYEPIAPYHIDLSGKAFGAMATAGNEQ 481
Query: 495 KLRKAGIIDMQFRRVKCKY 551
LR G +++QFRRV+CKY
Sbjct: 482 TLRSFGELELQFRRVRCKY 538
Score = 123 bits (264), Expect(2) = 3e-032
Identities = 57/96 (59%), Positives = 63/96 (65%)
Frame = -1 / -3
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
YL TL NC S P R+ S P +AMAP A+P RS WY AMGS*F+SVM T GL EH
Sbjct: 537 YLQRTLLNCSSSSPNERSVCSFPAVAMAPKALPDRSMWYGAMGS*FLSVMKTVMGLSEHG 358
Query: 370 AGLSHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
GL HL S Q+P P PSLK+G LP A M L GA FT
Sbjct: 357 GGLLHLTS*QEPHPLPSLKMGMLPQAIMPL*GARFT 250
Score = 108 bits (230), Expect(2) = 6e-028
Identities = 54/111 (48%), Positives = 70/111 (63%)
Frame = +2 / +1
Query: 134 QGSPG*EHHSQLW**LARCQGNMVWQANRCRPGRQWWRMWVQGREQGPFQQHGRMWQRPY 313
QG+ G +HH QL L QG++V Q +R RP RQ R+ QGRE Q+H R+ Q P+
Sbjct: 121 QGATGPQHHHQLQHELDPRQGHLVRQGHRLRPQRQRRRVRDQGREPCSLQRHDRLRQHPH 300
Query: 314 LQGWSRLWILLRDQVRQASGVLWQARGGVHYRHELRAHCGVPLRPSRHGVR 466
LQG + +LLR QV+QA+ VL QA +H+R ELRAH VP P R G+R
Sbjct: 301 LQGRQGMRLLLRGQVQQAAAVLRQAHHRLHHRQELRAHRAVPH*PVRQGLR 453
Score = 103 bits (219), Expect(2) = 6e-026
Identities = 51/114 (44%), Positives = 58/114 (50%)
Frame = -2 / -1
Query: 474 PWHRTPCLLGRSGTPQWARSSCL*CTPPRACQSTPLACRT*SRSRIHNLDHP*R*GRCHM 295
PW R PC G+ GT +WARSSC * AC+ST AC T* RSR P*R G C
Sbjct: 461 PWRRRPCRTGQCGTARWARSSCR**RR*WACRSTAAACCT*PRSRSRIPCRP*RWGCCRR 282
Query: 294 RPCC*KGPCSRPCTHIRHHCRPGRHLLACHTMLPWHLANHYHSWL*CSYPGEPW 133
R C + SRP + R C GR C T PW ++ SW *C P PW
Sbjct: 281 RSCRCREQGSRP*SRTRRRCLWGRSRWPCRTRWPWRGSSSCCSWW*CWGPVAPW 120
Score = 48.7 bits (100), Expect(2) = 8e-067
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3 / +2
Query: 534 RVKCKYGSKVTFHLEKGCNPNYLALLVKY 620
R K G+KVTFH+E G NPNYLA+LVK+
Sbjct: 527 RCKYAPGTKVTFHVETGSNPNYLAILVKF 613
Score = 36.3 bits (73), Expect(2) = 6e-028
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2 / +1
Query: 539 QVQVWI*GHLPFGEGMQPQLPGPVGQVR 622
QV+ W GHLP + ++P+LPG QVR
Sbjct: 532 QVRAWHQGHLPRRDRLEPKLPGHTRQVR 615
Score = 35.0 bits (70), Expect(2) = 3e-032
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -3 / -2
Query: 656 DVHRHNVTISINVLDQQGQVVGVASLLQMEGDL 558
++H H+V + + LD+ GQVV V + L +EGDL
Sbjct: 649 NLHLHDVAVVGDELDEYGQVVWVRAGLYVEGDL 551
Score = 34.5 bits (69), Expect(2) = 6e-026
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -1 / -3
Query: 616 LTNRAR*LGLHPFSKWKVTLDPYLHL 539
LT+ AR* G P S WKVTL P +L
Sbjct: 609 LTSMAR*FGFEPVSTWKVTLVPGAYL 532
>gb|CB883976.1|CB883976 HM06N05r HM Hordeum vulgare subsp. vulgare cDNA clone HM06N05
5-PRIME, mRNA sequence
Length = 616
Score = 226 bits (487), Expect(2) = 8e-067
Identities = 86/139 (61%), Positives = 100/139 (71%)
Frame = +3 / +2
Query: 135 KVPPGKNITANYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPI 314
KVPPG NIT NY +W AKATWYGK T KDVN AP+N M ACGN+PI
Sbjct: 101 KVPPGPNITTNYNMNWTPAKATWYGKATGSGPKDNGGACGIKDVNLAPYNGMIACGNIPI 280
Query: 315 FKDGLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEE 494
FKDG GCGSC+E+KC+KP CS KP+ V+ITD NYEPIA YH DL+G AFGAMA G E+
Sbjct: 281 FKDGKGCGSCYEVKCNKPPPCSDKPITVFITDKNYEPIAPYHIDLSGKAFGAMATAGNEQ 460
Query: 495 KLRKAGIIDMQFRRVKCKY 551
LR G +++QFRRV+CKY
Sbjct: 461 TLRSFGELELQFRRVRCKY 517
Score = 123 bits (264), Expect(2) = 4e-032
Identities = 57/96 (59%), Positives = 63/96 (65%)
Frame = -1 / -2
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
YL TL NC S P R+ S P +AMAP A+P RS WY AMGS*F+SVM T GL EH
Sbjct: 516 YLQRTLLNCSSSSPNERSVCSFPAVAMAPKALPDRSMWYGAMGS*FLSVMKTVMGLSEHG 337
Query: 370 AGLSHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
GL HL S Q+P P PSLK+G LP A M L GA FT
Sbjct: 336 GGLLHLTS*QEPHPLPSLKMGMLPQAIMPL*GARFT 229
Score = 108 bits (230), Expect(2) = 6e-028
Identities = 54/111 (48%), Positives = 70/111 (63%)
Frame = +2 / +1
Query: 134 QGSPG*EHHSQLW**LARCQGNMVWQANRCRPGRQWWRMWVQGREQGPFQQHGRMWQRPY 313
QG+ G +HH QL L QG++V Q +R RP RQ R+ QGRE Q+H R+ Q P+
Sbjct: 100 QGATGPQHHHQLQHELDPRQGHLVRQGHRLRPQRQRRRVRDQGREPCSLQRHDRLRQHPH 279
Query: 314 LQGWSRLWILLRDQVRQASGVLWQARGGVHYRHELRAHCGVPLRPSRHGVR 466
LQG + +LLR QV+QA+ VL QA +H+R ELRAH VP P R G+R
Sbjct: 280 LQGRQGMRLLLRGQVQQAAAVLRQAHHRLHHRQELRAHRAVPH*PVRQGLR 432
Score = 103 bits (219), Expect(2) = 4e-025
Identities = 51/114 (44%), Positives = 58/114 (50%)
Frame = -2 / -3
Query: 474 PWHRTPCLLGRSGTPQWARSSCL*CTPPRACQSTPLACRT*SRSRIHNLDHP*R*GRCHM 295
PW R PC G+ GT +WARSSC * AC+ST AC T* RSR P*R G C
Sbjct: 440 PWRRRPCRTGQCGTARWARSSCR**RR*WACRSTAAACCT*PRSRSRIPCRP*RWGCCRR 261
Query: 294 RPCC*KGPCSRPCTHIRHHCRPGRHLLACHTMLPWHLANHYHSWL*CSYPGEPW 133
R C + SRP + R C GR C T PW ++ SW *C P PW
Sbjct: 260 RSCRCREQGSRP*SRTRRRCLWGRSRWPCRTRWPWRGSSSCCSWW*CWGPVAPW 99
Score = 48.7 bits (100), Expect(2) = 8e-067
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3 / +2
Query: 534 RVKCKYGSKVTFHLEKGCNPNYLALLVKY 620
R K G+KVTFH+E G NPNYLA+LVK+
Sbjct: 506 RCKYAPGTKVTFHVETGSNPNYLAILVKF 592
Score = 36.3 bits (73), Expect(2) = 6e-028
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2 / +1
Query: 539 QVQVWI*GHLPFGEGMQPQLPGPVGQVR 622
QV+ W GHLP + ++P+LPG QVR
Sbjct: 511 QVRAWHQGHLPRRDRLEPKLPGHTRQVR 594
Score = 34.5 bits (69), Expect(2) = 4e-032
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -1 / -2
Query: 616 LTNRAR*LGLHPFSKWKVTLDPYLHL 539
LT+ AR* G P S WKVTL P +L
Sbjct: 588 LTSMAR*FGFEPVSTWKVTLVPGAYL 511
Score = 31.8 bits (63), Expect(2) = 4e-025
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -3 / -1
Query: 644 HNVTISINVLDQQGQVVGVASLLQMEGDL 558
H+V + + LD+ GQVV V + L +EGDL
Sbjct: 616 HDVAVVGDELDEYGQVVWVRAGLDVEGDL 530
>gb|BU995044.1|BU995044 HM09A07r HM Hordeum vulgare subsp. vulgare cDNA clone HM09A07
5-PRIME, mRNA sequence
Length = 628
Score = 236 bits (509), Expect(2) = 7e-066
Identities = 93/142 (65%), Positives = 107/142 (75%)
Frame = +3 / +1
Query: 126 GPPKVPPGKNITANYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGN 305
G KVP G NITA Y S+W DAK TWYGKPT YK+V+KAPF M +CGN
Sbjct: 85 GIAKVPCGPNITATYVSEWKDAKTTWYGKPTGAGPKDNGGACGYKEVDKAPFFGMTSCGN 264
Query: 306 VPIFKDGLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKG 485
VPIFKDG GCGSCFE+KC KP CSG+P +V ITD N EPIAAYHFDL+G AFG MAKKG
Sbjct: 265 VPIFKDGRGCGSCFELKCTKPEACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAKKG 444
Query: 486 EEEKLRKAGIIDMQFRRVKCKY 551
+E+KLR AG ++++FRRVKCKY
Sbjct: 445 QEQKLRDAGEVEIKFRRVKCKY 510
Score = 146 bits (313), Expect(2) = 4e-040
Identities = 65/104 (62%), Positives = 74/104 (71%)
Frame = -1 / -3
Query: 574 KWKVTLDPYLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYT 395
K+ + YLHLT RN +S PA R+F S PFLAM P A P RSKWYAAMGS F+SVM T
Sbjct: 533 KFTLVPSGYLHLTRRNLISTSPASRSFCSWPFLAMVPKAWPDRSKWYAAMGSSFLSVMVT 354
Query: 394 TTGLPEHSAGLSHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
G PE ++GL HL SKQ+PQPRPSLK+GTLP M KGAL T
Sbjct: 353 MVGSPEQASGLVHLSSKQEPQPRPSLKMGTLPQEVMPKKGALST 222
Score = 100 bits (212), Expect(2) = 7e-024
Identities = 53/111 (47%), Positives = 67/111 (60%)
Frame = +2 / +3
Query: 134 QGSPG*EHHSQLW**LARCQGNMVWQANRCRPGRQWWRMWVQGREQGPFQQHGRMWQRPY 313
QGS +HH L + RCQ ++V QA+ R Q R+ VQG QGP +H + QRP+
Sbjct: 93 QGSLWPQHHGDLRQRVERCQDDVVRQADGRRAQGQRRRLRVQGGGQGPLLRHDLLRQRPH 272
Query: 314 LQGWSRLWILLRDQVRQASGVLWQARGGVHYRHELRAHCGVPLRPSRHGVR 466
LQG RL +LLR QV QA G+L +A H+R E AH GVPLRP R +R
Sbjct: 273 LQGRPRLRLLLRAQVHQARGLLRRAHHRHHHRQERGAHRGVPLRPVRPCLR 425
Score = 98.2 bits (208), Expect(2) = 1e-021
Identities = 58/140 (41%), Positives = 75/140 (53%)
Frame = -3 / -2
Query: 551 ILALDPSKLHVNDARXXXXXXXXXLGHGTXXXXXXXXXXXRNGLVVHVCNVHHHGLARAL 372
+LALD ++L ++ A LGHG R+GL+V V + GLA A
Sbjct: 510 VLALDAAELDLHLAGVAQLLLLALLGHGAEGMAGQVEVVRRDGLLVLVGDGDDGGLAGAG 331
Query: 371 RWLVALDLEAGSTT*TILEDRDVATCAHAVERGLVHVLVPTSATIVVRAGTCWLAIPCCL 192
L AL+LEAG+ +LED DVA HA E GLVH+LVP A +V+ G LA+P L
Sbjct: 330 LGLGALELEAGAAAAAVLEDGDVAAGGHAEEGGLVHLLVPAGAAVVLGPGARRLAVPRRL 151
Query: 191 GI*PITTIVGCDVLTRGNLG 132
GI P+ + DV GNLG
Sbjct: 150 GIFPLADVGRRDVGATGNLG 91
Score = 77.6 bits (163), Expect(3) = 1e-026
Identities = 39/94 (41%), Positives = 44/94 (46%)
Frame = -2 / -1
Query: 387 ACQSTPLACRT*SRSRIHNLDHP*R*GRCHMRPCC*KGPCSRPCTHIRHHCRPGRHLLAC 208
A +S P A T*+RSR + P*R GRC R C +GPC PCT R C R AC
Sbjct: 346 ARRSRPRAWCT*ARSRSRSRGRP*RWGRCRRRSCRRRGPCPPPCTRRRRRCPWARRPSAC 167
Query: 207 HTMLPWHLANHYHSWL*CSYPGEPWEDHTRHRLP 106
T WHL+ *C EPW R P
Sbjct: 166 RTTSSWHLSTR*RRSP*CWGHREPWRCRARRTRP 65
Score = 50.6 bits (104), Expect(3) = 1e-026
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = -2 / -1
Query: 501 ATSPPHPSWPWHRTPCLLGRSGTPQWARSSC 409
A S P PSWPW R GRSGTP+WA SC
Sbjct: 460 AASAPGPSWPWCRRHGRTGRSGTPRWAPRSC 368
Score = 39.1 bits (79), Expect(2) = 4e-040
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = -3 / -1
Query: 656 DVHRHNVTISINVLDQQGQVVGVASLL 576
DVH H+V +++ LD QG+VVG +LL
Sbjct: 622 DVHGHHVAVALEELDNQGEVVGAGALL 542
Score = 35.4 bits (71), Expect(2) = 7e-066
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +1 / +3
Query: 574 WRRDATPTTWPCWSSTLMEMVTLWRWTS 657
WRR PTT P SS+ T W WTS
Sbjct: 540 WRRAPAPTTSPWLSSSSRATATWWPWTS 623
Score = 30.9 bits (61), Expect(2) = 7e-024
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 564 TFHLEKGCNPNYLALLVKY 620
T EKG +PNYLAL+VK+
Sbjct: 530 TSTXEKGSSPNYLALVVKF 586
Score = 29.5 bits (58), Expect(3) = 1e-026
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1 / -2
Query: 616 LTNRAR*LGLHPFSKWKVTL 557
LT RAR*LGL PFS +V L
Sbjct: 582 LTTRAR*LGLEPFSXVEVHL 523
Score = 25.4 bits (49), Expect(2) = 1e-021
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2 / -3
Query: 618 T*PTGPGSWGCIPSP 574
T* G GSWG PSP
Sbjct: 584 T*QPGRGSWGWSPSP 540
>gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002I16f, mRNA sequence
Length = 851
Score = 107 bits (228), Expect(4) = 7e-066
Identities = 42/59 (71%), Positives = 48/59 (81%)
Frame = +3 / +2
Query: 375 CSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY P++ +HFDL+GTAFGAMAK G E+LR AGIIDMQFRRV C+Y
Sbjct: 239 CSGVPETVIITDMNYYPVSRFHFDLSGTAFGAMAKDGRNEELRHAGIIDMQFRRVPCQY 415
Score = 93.2 bits (197), Expect(4) = 7e-066
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +3 / +2
Query: 159 TANYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCG 338
+ N + WLDA+ATWYG P +K+VN PF++M +CGN P+FKDG GCG
Sbjct: 17 STNVDAGWLDARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCG 196
Query: 339 SCFEIKC 359
SC++I+C
Sbjct: 197 SCYQIRC 217
Score = 87.7 bits (185), Expect(4) = 9e-030
Identities = 39/60 (65%), Positives = 42/60 (70%)
Frame = -1 / -3
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
Y H TL NCMSMMPA R+ S P LAMAP AVP RSKW G *FMSVM T +G PEH+
Sbjct: 414 YWHGTLLNCMSMMPACRSSSLRPSLAMAPKAVPLRSKWKRDTG**FMSVMITVSGTPEHA 235
Score = 68.4 bits (143), Expect(4) = 7e-066
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +3 / +2
Query: 684 PLKHSWGAIWRKDSDKPIKGPITVRLTTEGGTKTVYDDVIPAEWKPN 824
P+ SWG+IWR D+ +P++GP ++R+T E G V D V P +W+PN
Sbjct: 587 PMTESWGSIWRMDTRRPMQGPFSLRITNESGKTLVADQVNPGDWEPN 727
Score = 39.6 bits (80), Expect(4) = 7e-066
Identities = 16/30 (53%), Positives = 16/30 (53%)
Frame = +1 / +3
Query: 589 TPTTWPCWSSTLMEMVTLWRWTSRRRALTP 678
TPTTWP W ST T RWT R TP
Sbjct: 456 TPTTWPSWWSTRTATATWTRWT*CSRGRTP 545
Score = 37.7 bits (76), Expect(4) = 9e-030
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -1 / -3
Query: 361 SHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
+H I Q+PQP PSLK G+LP M KG T
Sbjct: 219 THRIW*QEPQPLPSLKSGSLPQEVMAEKGGRLT 121
Score = 34.5 bits (69), Expect(4) = 9e-030
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -3 / -2
Query: 653 VHRHNVTISINVLDQQGQVVGVASLLQME 567
VH +V +++ VL Q GQVVGV ++L +E
Sbjct: 520 VHLVHVAVAVLVLHQDGQVVGVGTVLHVE 434
Score = 25.8 bits (50), Expect(4) = 9e-030
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = -2 / -1
Query: 255 THIRHHCRPGRHLLACHTMLPWHLANHYHSW 163
T R CR R A T PW A+ W
Sbjct: 113 TRRRRRCRLARRHWARRTRSPWRRASRRRHW 21
>gb|BQ469137.1|BQ469137 HM03I08r HM Hordeum vulgare subsp. vulgare cDNA clone HM03I08
5-PRIME, mRNA sequence
Length = 616
Score = 226 bits (487), Expect(2) = 3e-065
Identities = 86/139 (61%), Positives = 100/139 (71%)
Frame = +3 / +3
Query: 135 KVPPGKNITANYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPI 314
KVPPG NIT NY +W AKATWYGK T KDVN AP+N M ACGN+PI
Sbjct: 132 KVPPGPNITTNYNMNWTPAKATWYGKATGSGPKDNGGACGIKDVNLAPYNGMIACGNIPI 311
Query: 315 FKDGLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEE 494
FKDG GCGSC+E+KC+KP CS KP+ V+ITD NYEPIA YH DL+G AFGAMA G E+
Sbjct: 312 FKDGKGCGSCYEVKCNKPPPCSDKPITVFITDKNYEPIAPYHIDLSGKAFGAMATAGNEQ 491
Query: 495 KLRKAGIIDMQFRRVKCKY 551
LR G +++QFRRV+CKY
Sbjct: 492 TLRSFGELELQFRRVRCKY 548
Score = 123 bits (264), Expect(2) = 2e-031
Identities = 57/96 (59%), Positives = 63/96 (65%)
Frame = -1 / -1
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
YL TL NC S P R+ S P +AMAP A+P RS WY AMGS*F+SVM T GL EH
Sbjct: 547 YLQRTLLNCSSSSPNERSVCSFPAVAMAPKALPDRSMWYGAMGS*FLSVMKTVMGLSEHG 368
Query: 370 AGLSHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
GL HL S Q+P P PSLK+G LP A M L GA FT
Sbjct: 367 GGLLHLTS*QEPHPLPSLKMGMLPQAIMPL*GARFT 260
Score = 108 bits (230), Expect(2) = 1e-026
Identities = 54/111 (48%), Positives = 70/111 (63%)
Frame = +2 / +2
Query: 134 QGSPG*EHHSQLW**LARCQGNMVWQANRCRPGRQWWRMWVQGREQGPFQQHGRMWQRPY 313
QG+ G +HH QL L QG++V Q +R RP RQ R+ QGRE Q+H R+ Q P+
Sbjct: 131 QGATGPQHHHQLQHELDPRQGHLVRQGHRLRPQRQRRRVRDQGREPCSLQRHDRLRQHPH 310
Query: 314 LQGWSRLWILLRDQVRQASGVLWQARGGVHYRHELRAHCGVPLRPSRHGVR 466
LQG + +LLR QV+QA+ VL QA +H+R ELRAH VP P R G+R
Sbjct: 311 LQGRQGMRLLLRGQVQQAAAVLRQAHHRLHHRQELRAHRAVPH*PVRQGLR 463
Score = 103 bits (219), Expect(2) = 2e-022
Identities = 51/114 (44%), Positives = 58/114 (50%)
Frame = -2 / -2
Query: 474 PWHRTPCLLGRSGTPQWARSSCL*CTPPRACQSTPLACRT*SRSRIHNLDHP*R*GRCHM 295
PW R PC G+ GT +WARSSC * AC+ST AC T* RSR P*R G C
Sbjct: 471 PWRRRPCRTGQCGTARWARSSCR**RR*WACRSTAAACCT*PRSRSRIPCRP*RWGCCRR 292
Query: 294 RPCC*KGPCSRPCTHIRHHCRPGRHLLACHTMLPWHLANHYHSWL*CSYPGEPW 133
R C + SRP + R C GR C T PW ++ SW *C P PW
Sbjct: 291 RSCRCREQGSRP*SRTRRRCLWGRSRWPCRTRWPWRGSSSCCSWW*CWGPVAPW 130
Score = 43.2 bits (88), Expect(2) = 3e-065
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3 / +3
Query: 534 RVKCKYGSKVTFHLEKGCNPNYLALL 611
R K G+KVTFH+E G NPNYLA+L
Sbjct: 537 RCKYAPGTKVTFHVETGSNPNYLAIL 614
Score = 32.7 bits (65), Expect(2) = 2e-031
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1 / -1
Query: 613 TNRAR*LGLHPFSKWKVTLDPYLHL 539
T+ AR* G P S WKVTL P +L
Sbjct: 616 TSMAR*FGFEPVSTWKVTLVPGAYL 542
Score = 31.8 bits (63), Expect(2) = 1e-026
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2 / +2
Query: 539 QVQVWI*GHLPFGEGMQPQLPG 604
QV+ W GHLP + ++P+LPG
Sbjct: 542 QVRAWHQGHLPRRDRLEPKLPG 607
Score = 23.1 bits (44), Expect(2) = 2e-022
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3 / -3
Query: 611 QQGQVVGVASLLQMEGDL 558
+ GQVV V + L +EGDL
Sbjct: 614 EYGQVVWVRAGLDVEGDL 561
>gb|BQ764421.1|BQ764421 EBan01_SQ005_G21_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_G21 5', mRNA sequence
Length = 538
Score = 239 bits (516), Expect(2) = 5e-065
Identities = 95/153 (62%), Positives = 111/153 (72%)
Frame = +3 / +2
Query: 126 GPPKVPPGKNITANYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGN 305
G KVP G NITANY S+W DAK TWYGKPT YK+V+KAPF M +CGN
Sbjct: 29 GIAKVPCGPNITANYVSEWKDAKTTWYGKPTGAGPKDNGGACGYKEVDKAPFFGMTSCGN 208
Query: 306 VPIFKDGLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKG 485
VPIFKDG GCGSCFE+KC KP CSG+P +V ITD N EPIAAYHFDL+G AFG MAKKG
Sbjct: 209 VPIFKDGRGCGSCFELKCTKPEACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAKKG 388
Query: 486 EEEKLRKAGIIDMQFRRVKCKYGSKVTFHLEKG 584
+E+KLR AG ++++FRRVKCKY + +G
Sbjct: 389 QEQKLRDAGEVEIKFRRVKCKYPEGTKVNXPRG 487
Score = 145 bits (312), Expect(2) = 3e-036
Identities = 64/96 (66%), Positives = 71/96 (73%)
Frame = -1 / -2
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
YLHLT RN +S PA R+F S PFLAM P A P RSKWYAAMGS F+SVM T G PE +
Sbjct: 453 YLHLTRRNLISTSPASRSFCSWPFLAMVPKAWPDRSKWYAAMGSSFLSVMVTMVGSPEQA 274
Query: 370 AGLSHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
+GL HL SKQ+PQPRPSLK+GTLP M KGAL T
Sbjct: 273 SGLVHLSSKQEPQPRPSLKMGTLPQEVMPKKGALST 166
Score = 100 bits (214), Expect = 1e-020
Identities = 58/140 (41%), Positives = 76/140 (54%)
Frame = -3 / -1
Query: 551 ILALDPSKLHVNDARXXXXXXXXXLGHGTXXXXXXXXXXXRNGLVVHVCNVHHHGLARAL 372
+LALD ++L ++ A LGHG R+GL+V V + GLA A
Sbjct: 454 VLALDAAELDLHLAGVAQLLLLALLGHGAEGMAGQVEVVRRDGLLVLVGDGDDGGLAGAG 275
Query: 371 RWLVALDLEAGSTT*TILEDRDVATCAHAVERGLVHVLVPTSATIVVRAGTCWLAIPCCL 192
L AL+LEAG+ +LED DVA HA E GLVH+LVP A +V+ G LA+P L
Sbjct: 274 LGLGALELEAGAAAAAVLEDGDVAAGGHAEEGGLVHLLVPAGAAVVLGPGARRLAVPRRL 95
Query: 191 GI*PITTIVGCDVLTRGNLG 132
G+ P+ +V DV GNLG
Sbjct: 94 GVFPLADVVRRDVGATGNLG 35
Score = 95.5 bits (202), Expect(2) = 2e-021
Identities = 52/111 (46%), Positives = 67/111 (60%)
Frame = +2 / +1
Query: 134 QGSPG*EHHSQLW**LARCQGNMVWQANRCRPGRQWWRMWVQGREQGPFQQHGRMWQRPY 313
QGS +HH +L + R Q ++V QA+ R Q R+ VQG QGP +H + QRP+
Sbjct: 37 QGSLWPQHHGELRQRVERRQDDVVRQADGRRAQGQRRRLRVQGGGQGPLLRHDLLRQRPH 216
Query: 314 LQGWSRLWILLRDQVRQASGVLWQARGGVHYRHELRAHCGVPLRPSRHGVR 466
LQG RL +LLR QV QA G+L +A H+R E AH GVPLRP R +R
Sbjct: 217 LQGRPRLRLLLRAQVHQARGLLRRAHHRHHHRQERGAHRGVPLRPVRPCLR 369
Score = 76.2 bits (160), Expect(3) = 2e-025
Identities = 39/94 (41%), Positives = 44/94 (46%)
Frame = -2 / -3
Query: 387 ACQSTPLACRT*SRSRIHNLDHP*R*GRCHMRPCC*KGPCSRPCTHIRHHCRPGRHLLAC 208
A +S P A T*+RSR + P*R GRC R C +GPC PCT R C R AC
Sbjct: 290 ARRSRPRAWCT*ARSRSRSRGRP*RWGRCRRRSCRRRGPCPPPCTRRRRRCPWARRPSAC 111
Query: 207 HTMLPWHLANHYHSWL*CSYPGEPWEDHTRHRLP 106
T W L+ S *C EPW R P
Sbjct: 110 RTTSSWRLSTR*RSSP*CWGHREPWRCRARRTRP 9
Score = 50.6 bits (104), Expect(3) = 2e-025
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = -2 / -3
Query: 501 ATSPPHPSWPWHRTPCLLGRSGTPQWARSSC 409
A S P PSWPW R GRSGTP+WA SC
Sbjct: 404 AASAPGPSWPWCRRHGRTGRSGTPRWAPRSC 312
Score = 29.5 bits (58), Expect(2) = 5e-065
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 569 PFGEGMQPQLPGP 607
P GEG+QPQLP P
Sbjct: 479 PRGEGLQPQLPSP 517
Score = 27.2 bits (53), Expect(2) = 2e-021
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +3
Query: 564 TFHLEKGCNPNYL 602
T H+EKG +PNYL
Sbjct: 474 TXHVEKGSSPNYL 512
Score = 26.7 bits (52), Expect(3) = 2e-025
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1 / -1
Query: 601 R*LGLHPFSKWKVTL 557
R*LGL PFS W V L
Sbjct: 511 R*LGLEPFSTWXVHL 467
Score = 26.7 bits (52), Expect(2) = 3e-036
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2 / -2
Query: 606 GPGSWGCIPSPNG 568
G GSWG PSP G
Sbjct: 516 GEGSWGWSPSPRG 478
>gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005E06f, mRNA sequence
Length = 796
Score = 191 bits (411), Expect(2) = 3e-063
Identities = 73/125 (58%), Positives = 89/125 (71%)
Frame = +3 / +1
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT +K+ N+ PF+SMG GN PIFKDG GCGSC++I+
Sbjct: 64 NWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMGGGGNXPIFKDGKGCGSCYQIR 243
Query: 357 CDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 244 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 423
Query: 537 VKCKY 551
V C++
Sbjct: 424 VPCEF 438
Score = 122 bits (260), Expect(2) = 5e-033
Identities = 57/90 (63%), Positives = 61/90 (67%)
Frame = -1 / -3
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMMP R+FS P LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 431 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 252
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G LP PM KG
Sbjct: 251 LVHRIW*QEPHPLPSLKMGXLPPPPMEEKG 162
Score = 84.5 bits (178), Expect(2) = 1e-022
Identities = 40/92 (43%), Positives = 52/92 (56%)
Frame = +2 / +3
Query: 191 QGNMVWQANRCRPGRQWWRMWVQGREQGPFQQHGRMWQRPYLQGWSRLWILLRDQVRQAS 370
QG++V +A+ CRP + W + VQ + P HG Q +LQGW + +LL D V Q
Sbjct: 78 QGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHGGGRQXAHLQGWQGMRLLLPDTVHQRP 257
Query: 371 GVLWQARGGVHYRHELRAHCGVPLRPSRHGVR 466
+L Q G H+RHEL C VPLRP H VR
Sbjct: 258 VLLRQPGDGGHHRHELLPGCQVPLRPEWHRVR 353
Score = 71.6 bits (150), Expect(2) = 3e-063
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +3 / +1
Query: 552 GSKVTFHLEKGCNPNYLALLVKYXXXXXXXXXXXXKEKGSDTYEPLKHSWGAIWRKDSDK 731
G KVTFH+E+G NP Y A+LV+Y E S T+ P++ SWG+I R DS
Sbjct: 442 GLKVTFHVEQGSNPVYFAVLVEYXDGDGDMVQVDLMEANSCTWTPMRESWGSILRLDSGH 621
Query: 732 PIKGPITVRLTTEGG 776
+ P++ L EGG
Sbjct: 622 GWRPPLSFALXNEGG 666
Score = 42.3 bits (86), Expect(2) = 1e-022
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +1 / +2
Query: 532 EGSSASMDLRSPSIWRRDATPTTWPCWSSTLMEMVTLWRWTSRR 663
E ++S+ R PS W R T T PCW ST T +WTS R
Sbjct: 422 ECRASSLVSR*PSTWSRGRTRCTSPCWWSTXTATATWCKWTSWR 553
Score = 39.6 bits (80), Expect(2) = 5e-033
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -3 / -2
Query: 722 ILPPDGAPXXXXXXXXXXXXXLDVHRHNVTISINVLDQQGQVVGVASLLQMEGDLRS 552
+ P D +P +VH H+V +++ VL Q G+V V LL +EG L +
Sbjct: 612 VQPQD*SPRLAHRRPRTGVGLHEVHLHHVAVAVXVLHQHGEVHRVRPLLHVEGHLET 442
>gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009C23f, mRNA sequence
Length = 762
Score = 189 bits (408), Expect(2) = 8e-060
Identities = 73/129 (56%), Positives = 89/129 (68%)
Frame = +3 / +3
Query: 165 NYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSC 344
+Y S WL A+ATWYG P +K VN+ PF+SM +CGN P+FKDG GCGSC
Sbjct: 174 SYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGNQPLFKDGKGCGSC 353
Query: 345 FEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG V ITDMNY P+A YHFDL+GTAFGA+AK G EKLR +GIID+
Sbjct: 354 YQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSGIIDI 533
Query: 525 QFRRVKCKY 551
QFRRV C +
Sbjct: 534 QFRRVPCNF 560
Score = 106 bits (226), Expect(2) = 2e-028
Identities = 54/95 (56%), Positives = 58/95 (61%)
Frame = -1 / -3
Query: 547 LHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSA 368
LH TL N MSMMP R+FS P LA AP AVP RSKWY A G *FMSV+ T + LPE
Sbjct: 556 LHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITVSMLPEQER 377
Query: 367 GLSHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
H I Q+PQP PSL G LP M KG FT
Sbjct: 376 SPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFT 272
Score = 61.6 bits (128), Expect(2) = 8e-060
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +3 / +3
Query: 552 GSKVTFHLEKGCNPNYLALLVKYXXXXXXXXXXXXKEKGSDTYEPLKHSWGAIWRKDSDK 731
G K+ FH+ +G N YLA+L++Y K S ++ ++ SWG+IWR DS+
Sbjct: 564 GLKINFHVVEGSNAVYLAVLIEYEDMDGDVIQVDMKGANSGSWMAMRESWGSIWRMDSNH 743
Query: 732 PIKGPI 749
++GP+
Sbjct: 744 RLQGPL 761
Score = 39.6 bits (80), Expect(2) = 2e-028
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -3 / -2
Query: 728 VAILPPDGAPXXXXXXXXXXXXXLDVHRHNVTISINVLDQQGQVVGVASLLQMEGDLRS 552
V + PPDG+P L VH +V + + VLDQ QV V +L +E DL +
Sbjct: 740 VGVHPPDGSPRLAHRHPRPRVGSLHVHLDHVAVHVLVLDQHRQVHRVGALHHVEVDLEA 564
>gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0018F10f, mRNA sequence
Length = 669
Score = 193 bits (415), Expect(3) = 2e-059
Identities = 73/125 (58%), Positives = 90/125 (72%)
Frame = +3 / +3
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 81 NWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 260
Query: 357 CDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 261 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 440
Query: 537 VKCKY 551
V C++
Sbjct: 441 VPCEF 455
Score = 122 bits (261), Expect(2) = 4e-030
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -3
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMMP R+FS P LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 448 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 269
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G+LPH M KG
Sbjct: 268 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 179
Score = 85.4 bits (180), Expect(2) = 8e-023
Identities = 40/92 (43%), Positives = 53/92 (57%)
Frame = +2 / +2
Query: 191 QGNMVWQANRCRPGRQWWRMWVQGREQGPFQQHGRMWQRPYLQGWSRLWILLRDQVRQAS 370
QG++V +A+ CRP + W + VQ + P H + QR +LQGW + +LL D V Q
Sbjct: 95 QGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRP 274
Query: 371 GVLWQARGGVHYRHELRAHCGVPLRPSRHGVR 466
+L Q G H+RHEL C VPLRP H VR
Sbjct: 275 VLLRQPGDGGHHRHELLPGCQVPLRPEWHRVR 370
Score = 43.2 bits (88), Expect(3) = 2e-059
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = +1 / +1
Query: 532 EGSSASMDLRSPSIWRRDATPTTWPCWSSTLMEMVTLWRWTSRR 663
E ++S+ R PS W R T T PCW ST T RWTS R
Sbjct: 439 ECRASSLVSR*PSTWSRGRTRCTSPCWWSTRTATATWCRWTSWR 570
Score = 41.8 bits (85), Expect(2) = 8e-023
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +3 / +3
Query: 552 GSKVTFHLEKGCNPNYLALLVKYXXXXXXXXXXXXKEKGSDTYE 683
G KVTFH+E+G NP Y A+LV+Y E S T++
Sbjct: 459 GLKVTFHVEQGSNPVYFAVLVEYEDGDGDLVQVDLMEANSGTWD 590
Score = 32.7 bits (65), Expect(3) = 2e-059
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3 / +1
Query: 684 PLKHSWGAIWRKDSDKPIKGPITV 755
P++ SWG+IWR +S ++ P ++
Sbjct: 592 PMRESWGSIWRVESGHRLQAPFSM 663
Score = 29.5 bits (58), Expect(2) = 4e-030
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1 / -3
Query: 619 YLTNRAR*LGLHPFSKWKVTLDP 551
Y T+ A+ G P S WKVTL P
Sbjct: 526 YSTSTAKYTGFDPCSTWKVTLRP 458
>gb|CB884030.1|CB884030 HM10H05r HM Hordeum vulgare subsp. vulgare cDNA clone HM10H05
5-PRIME, mRNA sequence
Length = 539
Score = 226 bits (487), Expect = 2e-058
Identities = 86/139 (61%), Positives = 100/139 (71%)
Frame = +3 / +2
Query: 135 KVPPGKNITANYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPI 314
KVPPG NIT NY +W AKATWYGK T KDVN AP+N M ACGN+PI
Sbjct: 101 KVPPGPNITTNYNMNWTPAKATWYGKATGSGPKDNGGACGIKDVNLAPYNGMIACGNIPI 280
Query: 315 FKDGLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEE 494
FKDG GCGSC+E+KC+KP CS KP+ V+ITD NYEPIA YH DL+G AFGAMA G E+
Sbjct: 281 FKDGKGCGSCYEVKCNKPPPCSDKPITVFITDKNYEPIAPYHIDLSGKAFGAMATAGNEQ 460
Query: 495 KLRKAGIIDMQFRRVKCKY 551
LR G +++QFRRV+CKY
Sbjct: 461 TLRSFGELELQFRRVRCKY 517
Score = 123 bits (264), Expect = 1e-027
Identities = 57/96 (59%), Positives = 63/96 (65%)
Frame = -1 / -3
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
YL TL NC S P R+ S P +AMAP A+P RS WY AMGS*F+SVM T GL EH
Sbjct: 516 YLQRTLLNCSSSSPNERSVCSFPAVAMAPKALPDRSMWYGAMGS*FLSVMKTVMGLSEHG 337
Query: 370 AGLSHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
GL HL S Q+P P PSLK+G LP A M L GA FT
Sbjct: 336 GGLLHLTS*QEPHPLPSLKMGMLPQAIMPL*GARFT 229
Score = 108 bits (230), Expect = 6e-023
Identities = 54/111 (48%), Positives = 70/111 (63%)
Frame = +2 / +1
Query: 134 QGSPG*EHHSQLW**LARCQGNMVWQANRCRPGRQWWRMWVQGREQGPFQQHGRMWQRPY 313
QG+ G +HH QL L QG++V Q +R RP RQ R+ QGRE Q+H R+ Q P+
Sbjct: 100 QGATGPQHHHQLQHELDPRQGHLVRQGHRLRPQRQRRRVRDQGREPCSLQRHDRLRQHPH 279
Query: 314 LQGWSRLWILLRDQVRQASGVLWQARGGVHYRHELRAHCGVPLRPSRHGVR 466
LQG + +LLR QV+QA+ VL QA +H+R ELRAH VP P R G+R
Sbjct: 280 LQGRQGMRLLLRGQVQQAAAVLRQAHHRLHHRQELRAHRAVPH*PVRQGLR 432
Score = 103 bits (219), Expect = 2e-021
Identities = 51/114 (44%), Positives = 58/114 (50%)
Frame = -2 / -1
Query: 474 PWHRTPCLLGRSGTPQWARSSCL*CTPPRACQSTPLACRT*SRSRIHNLDHP*R*GRCHM 295
PW R PC G+ GT +WARSSC * AC+ST AC T* RSR P*R G C
Sbjct: 440 PWRRRPCRTGQCGTARWARSSCR**RR*WACRSTAAACCT*PRSRSRIPCRP*RWGCCRR 261
Query: 294 RPCC*KGPCSRPCTHIRHHCRPGRHLLACHTMLPWHLANHYHSWL*CSYPGEPW 133
R C + SRP + R C GR C T PW ++ SW *C P PW
Sbjct: 260 RSCRCREQGSRP*SRTRRRCLWGRSRWPCRTRWPWRGSSSCCSWW*CWGPVAPW 99
>gb|CB884057.1|CB884057 HM12C11r HM Hordeum vulgare subsp. vulgare cDNA clone HM12C11
5-PRIME, mRNA sequence
Length = 539
Score = 226 bits (487), Expect = 2e-058
Identities = 86/139 (61%), Positives = 100/139 (71%)
Frame = +3 / +2
Query: 135 KVPPGKNITANYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPI 314
KVPPG NIT NY +W AKATWYGK T KDVN AP+N M ACGN+PI
Sbjct: 101 KVPPGPNITTNYNMNWTPAKATWYGKATGSGPKDNGGACGIKDVNLAPYNGMIACGNIPI 280
Query: 315 FKDGLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEE 494
FKDG GCGSC+E+KC+KP CS KP+ V+ITD NYEPIA YH DL+G AFGAMA G E+
Sbjct: 281 FKDGKGCGSCYEVKCNKPPPCSDKPITVFITDKNYEPIAPYHIDLSGKAFGAMATAGNEQ 460
Query: 495 KLRKAGIIDMQFRRVKCKY 551
LR G +++QFRRV+CKY
Sbjct: 461 TLRSFGELELQFRRVRCKY 517
Score = 123 bits (264), Expect = 1e-027
Identities = 57/96 (59%), Positives = 63/96 (65%)
Frame = -1 / -3
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
YL TL NC S P R+ S P +AMAP A+P RS WY AMGS*F+SVM T GL EH
Sbjct: 516 YLQRTLLNCSSSSPNERSVCSFPAVAMAPKALPDRSMWYGAMGS*FLSVMKTVMGLSEHG 337
Query: 370 AGLSHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
GL HL S Q+P P PSLK+G LP A M L GA FT
Sbjct: 336 GGLLHLTS*QEPHPLPSLKMGMLPQAIMPL*GARFT 229
Score = 108 bits (230), Expect = 6e-023
Identities = 54/111 (48%), Positives = 70/111 (63%)
Frame = +2 / +1
Query: 134 QGSPG*EHHSQLW**LARCQGNMVWQANRCRPGRQWWRMWVQGREQGPFQQHGRMWQRPY 313
QG+ G +HH QL L QG++V Q +R RP RQ R+ QGRE Q+H R+ Q P+
Sbjct: 100 QGATGPQHHHQLQHELDPRQGHLVRQGHRLRPQRQRRRVRDQGREPCSLQRHDRLRQHPH 279
Query: 314 LQGWSRLWILLRDQVRQASGVLWQARGGVHYRHELRAHCGVPLRPSRHGVR 466
LQG + +LLR QV+QA+ VL QA +H+R ELRAH VP P R G+R
Sbjct: 280 LQGRQGMRLLLRGQVQQAAAVLRQAHHRLHHRQELRAHRAVPH*PVRQGLR 432
Score = 103 bits (219), Expect = 2e-021
Identities = 51/114 (44%), Positives = 58/114 (50%)
Frame = -2 / -1
Query: 474 PWHRTPCLLGRSGTPQWARSSCL*CTPPRACQSTPLACRT*SRSRIHNLDHP*R*GRCHM 295
PW R PC G+ GT +WARSSC * AC+ST AC T* RSR P*R G C
Sbjct: 440 PWRRRPCRTGQCGTARWARSSCR**RR*WACRSTAAACCT*PRSRSRIPCRP*RWGCCRR 261
Query: 294 RPCC*KGPCSRPCTHIRHHCRPGRHLLACHTMLPWHLANHYHSWL*CSYPGEPW 133
R C + SRP + R C GR C T PW ++ SW *C P PW
Sbjct: 260 RSCRCREQGSRP*SRTRRRCLWGRSRWPCRTRWPWRGSSSCCSWW*CWGPVAPW 99
>gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010F166 5-PRIME, mRNA sequence
Length = 750
Score = 175 bits (376), Expect(3) = 1e-056
Identities = 66/121 (54%), Positives = 85/121 (70%)
Frame = +3 / +1
Query: 189 AKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIKCDKP 368
A+ATWYG P +K+VN+ PF +M +CGN P+FKDG GCG+C++IKC K
Sbjct: 28 ARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKH 207
Query: 369 AECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCK 548
CSG+ V ITDMNY P+A YHFDL+GTAFG +AK G ++LR AGIID+QF RV C+
Sbjct: 208 KACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACE 387
Query: 549 Y 551
+
Sbjct: 388 F 390
Score = 49.2 bits (101), Expect(3) = 1e-056
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +3 / +1
Query: 663 KGSDTYEPLKHSWGAIWRKDSDKPIKGPITVRLTTEGGTKTVYDDVIP 806
+G + ++ SWG+IWR DS+ ++ P ++R+ E G V +VIP
Sbjct: 520 RGGGRWTRMRESWGSIWRLDSNHRLQAPFSIRIRNESGKTLVARNVIP 663
Score = 35.0 bits (70), Expect(3) = 1e-056
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3 / +1
Query: 552 GSKVTFHLEKGCNPNYLALLVKY 620
G KV FH+E+G N Y+A+LV+Y
Sbjct: 394 GLKVGFHVEEGSNAVYMAILVEY 462
>gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092D24f, mRNA sequence
Length = 901
Score = 193 bits (415), Expect(3) = 1e-055
Identities = 73/125 (58%), Positives = 90/125 (72%)
Frame = +3 / +1
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 103 NWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 282
Query: 357 CDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 283 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 462
Query: 537 VKCKY 551
V C++
Sbjct: 463 VPCEF 477
Score = 122 bits (261), Expect = 3e-027
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -3
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMMP R+FS P LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 470 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 291
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G+LPH M KG
Sbjct: 290 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 201
Score = 32.2 bits (64), Expect(3) = 1e-055
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3 / +3
Query: 555 SKVTFHLEKGCNPNYLALLVKY 620
S+VTFH+E+ NP Y A+L +Y
Sbjct: 483 SQVTFHVEQXSNPVYFAVLGEY 548
Score = 30.9 bits (61), Expect(3) = 1e-055
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3 / +3
Query: 675 TYEPLKHSWGAIWRKDSDKPIKGPIT 752
T+ P++ SWG+IW D ++ P +
Sbjct: 603 TWTPMRESWGSIWGLDFGHRLQAPFS 680
>gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016J13f, mRNA sequence
Length = 656
Score = 193 bits (415), Expect(2) = 2e-054
Identities = 73/125 (58%), Positives = 90/125 (72%)
Frame = +3 / +3
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 177 NWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 356
Query: 357 CDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 357 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 536
Query: 537 VKCKY 551
V C++
Sbjct: 537 VPCEF 551
Score = 122 bits (261), Expect(2) = 4e-030
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -2
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMMP R+FS P LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 544 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 365
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G+LPH M KG
Sbjct: 364 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 275
Score = 85.4 bits (180), Expect(2) = 7e-021
Identities = 40/92 (43%), Positives = 53/92 (57%)
Frame = +2 / +2
Query: 191 QGNMVWQANRCRPGRQWWRMWVQGREQGPFQQHGRMWQRPYLQGWSRLWILLRDQVRQAS 370
QG++V +A+ CRP + W + VQ + P H + QR +LQGW + +LL D V Q
Sbjct: 191 QGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRP 370
Query: 371 GVLWQARGGVHYRHELRAHCGVPLRPSRHGVR 466
+L Q G H+RHEL C VPLRP H VR
Sbjct: 371 VLLRQPGDGGHHRHELLPGCQVPLRPEWHRVR 466
Score = 40.5 bits (82), Expect(2) = 2e-054
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3 / +3
Query: 552 GSKVTFHLEKGCNPNYLALLVKY 620
G KVTFH+E+G NP Y A+LV+Y
Sbjct: 555 GLKVTFHVEQGSNPVYFAVLVEY 623
Score = 35.4 bits (71), Expect(2) = 7e-021
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1 / +1
Query: 532 EGSSASMDLRSPSIWRRDATPTTWPCWSSTLMEMVTLWRW 651
E ++S+ R PS W R T T PCW ST T W
Sbjct: 535 ECRASSLVSR*PSTWSRGRTRCTSPCWWSTRTATATWCXW 654
Score = 29.5 bits (58), Expect(2) = 4e-030
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1 / -2
Query: 619 YLTNRAR*LGLHPFSKWKVTLDP 551
Y T+ A+ G P S WKVTL P
Sbjct: 622 YSTSTAKYTGFDPCSTWKVTLRP 554
>gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09C23
5-PRIME, mRNA sequence
Length = 653
Score = 193 bits (415), Expect(2) = 2e-054
Identities = 73/125 (58%), Positives = 90/125 (72%)
Frame = +3 / +1
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 199 NWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 378
Query: 357 CDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 379 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 558
Query: 537 VKCKY 551
V C++
Sbjct: 559 VPCEF 573
Score = 122 bits (261), Expect(2) = 4e-030
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -1
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMMP R+FS P LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 566 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 387
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G+LPH M KG
Sbjct: 386 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 297
Score = 40.5 bits (82), Expect(2) = 2e-054
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3 / +1
Query: 552 GSKVTFHLEKGCNPNYLALLVKY 620
G KVTFH+E+G NP Y A+LV+Y
Sbjct: 577 GLKVTFHVEQGSNPVYFAVLVEY 645
Score = 29.5 bits (58), Expect(2) = 4e-030
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1 / -1
Query: 619 YLTNRAR*LGLHPFSKWKVTLDP 551
Y T+ A+ G P S WKVTL P
Sbjct: 644 YSTSTAKYTGFDPCSTWKVTLRP 576
>gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL105f8 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 702
Score = 105 bits (224), Expect(4) = 3e-054
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +3
Query: 375 CSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 321 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 497
Score = 99.1 bits (210), Expect(4) = 3e-054
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +3 / +3
Query: 174 SDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEI 353
S WLDAKATWYG+PT +K+VN PF+SM +CGN P+FKDG GCGSC++I
Sbjct: 114 SSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQI 293
Query: 354 KC 359
+C
Sbjct: 294 RC 299
Score = 87.2 bits (184), Expect(3) = 6e-028
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -1 / -3
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
Y H TL NCM +MPA R+ S P+LAMAP AVP RSKW GS*FMSVM T G PEH+
Sbjct: 496 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHA 317
Score = 39.1 bits (79), Expect(4) = 3e-054
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3 / +3
Query: 552 GSKVTFHLEKGCNPNYLALLVKY 620
G VTFH+E+G NP Y+A+LV+Y
Sbjct: 501 GLTVTFHVEEGSNPFYMAILVEY 569
Score = 37.7 bits (76), Expect(3) = 6e-028
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -3
Query: 358 HLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
HLI Q+PQP PSLK G LP M KG T
Sbjct: 298 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 203
Score = 37.3 bits (75), Expect(3) = 6e-028
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2 / -1
Query: 255 THIRHHCRPGRHLLACHTMLPWHLAN 178
T R CR RH CHTM PW A+
Sbjct: 195 TRTRRRCRLARHRSVCHTMSPWRRAS 118
Score = 25.4 bits (49), Expect(4) = 3e-054
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 684 PLKHSWGAIWR 716
P+K SW +IWR
Sbjct: 666 PMKESWXSIWR 698
>gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL87h3 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 701
Score = 105 bits (224), Expect(4) = 3e-054
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +3
Query: 375 CSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 327 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 503
Score = 99.1 bits (210), Expect(4) = 3e-054
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +3 / +3
Query: 174 SDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEI 353
S WLDAKATWYG+PT +K+VN PF+SM +CGN P+FKDG GCGSC++I
Sbjct: 120 SSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQI 299
Query: 354 KC 359
+C
Sbjct: 300 RC 305
Score = 87.2 bits (184), Expect(3) = 6e-028
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -1 / -2
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
Y H TL NCM +MPA R+ S P+LAMAP AVP RSKW GS*FMSVM T G PEH+
Sbjct: 502 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHA 323
Score = 38.2 bits (77), Expect(4) = 3e-054
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1 / +1
Query: 568 SIWRRDATPTTWPCWSSTLMEMVTLWRWT 654
S WRR T +TW W ST MEM WT
Sbjct: 523 STWRRGRTRSTWQSWWSTRMEMAM*SSWT 609
Score = 37.7 bits (76), Expect(3) = 6e-028
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -2
Query: 358 HLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
HLI Q+PQP PSLK G LP M KG T
Sbjct: 304 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 209
Score = 37.3 bits (75), Expect(3) = 6e-028
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2 / -3
Query: 255 THIRHHCRPGRHLLACHTMLPWHLAN 178
T R CR RH CHTM PW A+
Sbjct: 201 TRTRRRCRLARHRSVCHTMSPWRRAS 124
Score = 26.3 bits (51), Expect(4) = 3e-054
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3 / +3
Query: 684 PLKHSWGAIW 713
P+K SWG+IW
Sbjct: 672 PMKESWGSIW 701
>gb|BQ764220.1|BQ764220 EBan01_SQ005_P04_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_P04 5', mRNA sequence
Length = 470
Score = 211 bits (456), Expect = 4e-054
Identities = 84/126 (66%), Positives = 94/126 (74%)
Frame = +3 / +2
Query: 126 GPPKVPPGKNITANYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGN 305
G KVP G NITANY S+W DAK TWYGKPT YK+V+KAPF M +CGN
Sbjct: 89 GIAKVPCGPNITANYVSEWKDAKTTWYGKPTGAGPKDNGGACGYKEVDKAPFFGMTSCGN 268
Query: 306 VPIFKDGLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKG 485
VPIFKDG GCGSCFE+KC KP CSG+P +V ITD N EPIAAYHFDL+G AFG MAKKG
Sbjct: 269 VPIFKDGRGCGSCFELKCTKPEACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAKKG 448
Query: 486 EEEKLR 503
+E+KLR
Sbjct: 449 QEQKLR 466
Score = 123 bits (264), Expect = 1e-027
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = -1 / -3
Query: 502 RNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAGLSHLISKQDPQPRP 323
R+F S PFLAM P A P RSKWYAAMGS F+SVM T G PE ++GL HL SKQ+PQPRP
Sbjct: 465 RSFCSWPFLAMVPKAWPDRSKWYAAMGSSFLSVMVTMVGSPEQASGLVHLSSKQEPQPRP 286
Query: 322 SLKIGTLPHAPMLLKGALFT 263
SLK+GTLP M KGAL T
Sbjct: 285 SLKMGTLPQEVMPKKGALST 226
Score = 76.2 bits (160), Expect(2) = 1e-022
Identities = 39/94 (41%), Positives = 44/94 (46%)
Frame = -2 / -1
Query: 387 ACQSTPLACRT*SRSRIHNLDHP*R*GRCHMRPCC*KGPCSRPCTHIRHHCRPGRHLLAC 208
A +S P A T*+RSR + P*R GRC R C +GPC PCT R C R AC
Sbjct: 350 ARRSRPRAWCT*ARSRSRSRGRP*RWGRCRRRSCRRRGPCPPPCTRRRRRCPWARRPSAC 171
Query: 207 HTMLPWHLANHYHSWL*CSYPGEPWEDHTRHRLP 106
T W L+ S *C EPW R P
Sbjct: 170 RTTSSWRLSTR*RSSP*CWGHREPWRCRARRTRP 69
Score = 50.6 bits (104), Expect(2) = 1e-022
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = -2 / -1
Query: 501 ATSPPHPSWPWHRTPCLLGRSGTPQWARSSC 409
A S P PSWPW R GRSGTP+WA SC
Sbjct: 464 AASAPGPSWPWCRRHGRTGRSGTPRWAPRSC 372
>gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024K16f, mRNA sequence
Length = 677
Score = 193 bits (415), Expect(2) = 4e-054
Identities = 73/125 (58%), Positives = 90/125 (72%)
Frame = +3 / +2
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 191 NWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 370
Query: 357 CDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 371 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 550
Query: 537 VKCKY 551
V C++
Sbjct: 551 VPCEF 565
Score = 122 bits (261), Expect(2) = 4e-031
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -3
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMMP R+FS P LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 558 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 379
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G+LPH M KG
Sbjct: 378 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 289
Score = 85.4 bits (180), Expect(2) = 7e-021
Identities = 40/92 (43%), Positives = 53/92 (57%)
Frame = +2 / +1
Query: 191 QGNMVWQANRCRPGRQWWRMWVQGREQGPFQQHGRMWQRPYLQGWSRLWILLRDQVRQAS 370
QG++V +A+ CRP + W + VQ + P H + QR +LQGW + +LL D V Q
Sbjct: 205 QGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRP 384
Query: 371 GVLWQARGGVHYRHELRAHCGVPLRPSRHGVR 466
+L Q G H+RHEL C VPLRP H VR
Sbjct: 385 VLLRQPGDGGHHRHELLPGCQVPLRPEWHRVR 480
Score = 39.1 bits (79), Expect(2) = 4e-054
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +1 / +3
Query: 532 EGSSASMDLRSPSIWRRDATPTTWPCWSSTLMEMVTLWRWTS 657
E ++S+ R P W R T T PCW ST T RWTS
Sbjct: 549 ECRASSLVSR*PXTWSRGRTRCTSPCWWSTRTATGTWCRWTS 674
Score = 35.4 bits (71), Expect(2) = 7e-021
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3 / +2
Query: 552 GSKVTFHLEKGCNPNYLALLVKY 620
G KVT H+E+G NP Y +LV+Y
Sbjct: 569 GLKVTXHVEQGSNPVYFXVLVEY 637
Score = 32.7 bits (65), Expect(2) = 4e-031
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3 / -2
Query: 656 DVHRHNVTISINVLDQQGQVVGVASLLQMEGDLRS 552
+VH H V +++ VL Q G+V V LL + G L +
Sbjct: 673 EVHLHXVPVAVLVLHQHGEVHRVRPLLHVXGHLET 569
>gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010F11f, mRNA sequence
Length = 630
Score = 188 bits (406), Expect(2) = 4e-054
Identities = 72/125 (57%), Positives = 89/125 (71%)
Frame = +3 / +1
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIK 356
+W DA+ATWYG T +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 139 NWEDARATWYGARTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 318
Query: 357 CDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 319 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 498
Query: 537 VKCKY 551
V C++
Sbjct: 499 VPCEF 513
Score = 122 bits (261), Expect(2) = 1e-029
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -2
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMMP R+FS P LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 506 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 327
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G+LPH M KG
Sbjct: 326 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 237
Score = 85.4 bits (180), Expect(2) = 1e-021
Identities = 40/92 (43%), Positives = 53/92 (57%)
Frame = +2 / +3
Query: 191 QGNMVWQANRCRPGRQWWRMWVQGREQGPFQQHGRMWQRPYLQGWSRLWILLRDQVRQAS 370
QG++V +A+ CRP + W + VQ + P H + QR +LQGW + +LL D V Q
Sbjct: 153 QGHLVRRADGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRP 332
Query: 371 GVLWQARGGVHYRHELRAHCGVPLRPSRHGVR 466
+L Q G H+RHEL C VPLRP H VR
Sbjct: 333 VLLRQPGDGGHHRHELLPGCQVPLRPEWHRVR 428
Score = 43.2 bits (88), Expect(2) = 4e-054
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = +1 / +2
Query: 532 EGSSASMDLRSPSIWRRDATPTTWPCWSSTLMEMVTLWRWTSRR 663
E ++S+ R PS W R T T PCW ST T RWTS R
Sbjct: 497 ECRASSLVSR*PSTWSRGRTRCTSPCWWSTKTATATWCRWTSWR 628
Score = 38.2 bits (77), Expect(2) = 1e-021
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3 / +1
Query: 552 GSKVTFHLEKGCNPNYLALLVKY 620
G KVTFH+E+G NP Y +LV+Y
Sbjct: 517 GLKVTFHVEQGSNPVYFPVLVEY 585
Score = 27.6 bits (54), Expect(2) = 1e-029
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1 / -2
Query: 619 YLTNRAR*LGLHPFSKWKVTLDP 551
Y T+ + G P S WKVTL P
Sbjct: 584 YSTSTGKYTGFDPCSTWKVTLRP 516
>gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P122 5-PRIME, mRNA sequence
Length = 717
Score = 146 bits (313), Expect(3) = 4e-054
Identities = 54/91 (59%), Positives = 70/91 (76%)
Frame = +3 / +1
Query: 279 FNSMGACGNVPIFKDGLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGT 458
F SM +CGN P+FKDG GCGSC++I+C K CSG+ V ITDMNY P+A YHFDL+GT
Sbjct: 1 FASMTSCGNQPLFKDGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAPYHFDLSGT 180
Query: 459 AFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
AFG +AK G ++LR +GIID++F RV C++
Sbjct: 181 AFGRLAKPGLNDRLRHSGIIDIEFTRVPCEF 273
Score = 91.8 bits (194), Expect(2) = 8e-023
Identities = 46/86 (53%), Positives = 49/86 (56%)
Frame = -1 / -2
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H T N MSMMP R+ S SP A PNAVP RSKW A G *FMSVM T + LPE
Sbjct: 266 HGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMITVSVLPEQDWS 87
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPM 287
HLI +P P PSL G LP M
Sbjct: 86 FLHLIL*HEPHPLPSLNNGWLPQEVM 9
Score = 62.0 bits (129), Expect(3) = 4e-054
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +3 / +1
Query: 666 GSDTYEPLKHSWGAIWRKDSDKPIKGPITVRLTTEGGTKTVYDDVIPAEWKPN 824
G + ++ SWG++WR DS+ ++ P ++R+ E G V + VIPA W+PN
Sbjct: 400 GGGKWTRMRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPN 558
Score = 42.3 bits (86), Expect(3) = 4e-054
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +1 / +2
Query: 541 SASMDLRSPSIWRRDATPTTWPCWSSTLMEMVTLWRWTSRRR 666
++S RS S WR TP+T CW ST T RWTS R
Sbjct: 266 ASSRGSRSGSTWRSTRTPSTSRCWWSTRTATATWCRWTSWSR 391
Score = 35.4 bits (71), Expect(2) = 8e-023
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -3 / -1
Query: 656 DVHRHNVTISINVLDQQGQVVGVASLLQMEGDL 558
+VH H+V +++ VL Q +V GV LL +E DL
Sbjct: 381 EVHLHHVAVAVLVLHQHREVDGVRVLLHVEPDL 283
>gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019F12f, mRNA sequence
Length = 669
Score = 193 bits (415), Expect(2) = 6e-054
Identities = 73/125 (58%), Positives = 90/125 (72%)
Frame = +3 / +2
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 191 NWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 370
Query: 357 CDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 371 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 550
Query: 537 VKCKY 551
V C++
Sbjct: 551 VPCEF 565
Score = 122 bits (261), Expect(2) = 3e-029
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -1
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMMP R+FS P LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 558 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 379
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G+LPH M KG
Sbjct: 378 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 289
Score = 85.4 bits (180), Expect(2) = 7e-021
Identities = 40/92 (43%), Positives = 53/92 (57%)
Frame = +2 / +1
Query: 191 QGNMVWQANRCRPGRQWWRMWVQGREQGPFQQHGRMWQRPYLQGWSRLWILLRDQVRQAS 370
QG++V +A+ CRP + W + VQ + P H + QR +LQGW + +LL D V Q
Sbjct: 205 QGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRP 384
Query: 371 GVLWQARGGVHYRHELRAHCGVPLRPSRHGVR 466
+L Q G H+RHEL C VPLRP H VR
Sbjct: 385 VLLRQPGDGGHHRHELLPGCQVPLRPEWHRVR 480
Score = 38.6 bits (78), Expect(2) = 6e-054
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 555 SKVTFHLEKGCNPNYLALLVKY 620
S+VTFH+E+G NP Y A+LV+Y
Sbjct: 571 SQVTFHVEQGSNPVYFAVLVEY 636
Score = 35.4 bits (71), Expect(2) = 7e-021
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1 / +2
Query: 556 LRSPSIWRRDATPTTWPCWSSTLMEMVTLWRW 651
L+ PS W R T T PCW ST T +W
Sbjct: 572 LK*PSTWSRGRTRCTSPCWWSTRTATATWCKW 667
Score = 26.3 bits (51), Expect(2) = 3e-029
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1 / -2
Query: 619 YLTNRAR*LGLHPFSKWKVTLD 554
Y T+ A+ G P S WKVT D
Sbjct: 635 YSTSTAKYTGFDPCSTWKVT*D 570
>gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020N13f, mRNA sequence
Length = 630
Score = 193 bits (415), Expect(2) = 2e-053
Identities = 73/125 (58%), Positives = 90/125 (72%)
Frame = +3 / +3
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 186 NWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 365
Query: 357 CDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 366 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 545
Query: 537 VKCKY 551
V C++
Sbjct: 546 VPCEF 560
Score = 122 bits (261), Expect(2) = 2e-029
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -3
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMMP R+FS P LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 553 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 374
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G+LPH M KG
Sbjct: 373 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 284
Score = 37.3 bits (75), Expect(2) = 2e-053
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3 / +3
Query: 552 GSKVTFHLEKGCNPNYLALLVK 617
G KVTFH+E+G NP Y A+LV+
Sbjct: 564 GLKVTFHVEQGSNPVYFAVLVE 629
Score = 27.2 bits (53), Expect(2) = 2e-029
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1 / -3
Query: 613 TNRAR*LGLHPFSKWKVTLDP 551
T+ A+ G P S WKVTL P
Sbjct: 625 TSTAKYTGFDPCSTWKVTLRP 563
>gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010J225 5-PRIME, mRNA sequence
Length = 776
Score = 175 bits (376), Expect(3) = 5e-053
Identities = 66/121 (54%), Positives = 85/121 (70%)
Frame = +3 / +1
Query: 189 AKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIKCDKP 368
A+ATWYG P +K+VN+ PF +M +CGN P+FKDG GCG+C++IKC K
Sbjct: 145 ARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKH 324
Query: 369 AECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCK 548
CSG+ V ITDMNY P+A YHFDL+GTAFG +AK G ++LR AGIID+QF RV C+
Sbjct: 325 KACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACE 504
Query: 549 Y 551
+
Sbjct: 505 F 507
Score = 36.8 bits (74), Expect(3) = 5e-053
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3 / +3
Query: 687 LKHSWGAIWRKDSDKPIKGPITVRLTTEGGTK 782
+ SWG+IW DS ++ P ++R+ E G K
Sbjct: 663 MPESWGSIWGLDSXNRLQXPXSIRIRNESGKK 758
Score = 35.0 bits (70), Expect(3) = 5e-053
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3 / +1
Query: 552 GSKVTFHLEKGCNPNYLALLVKY 620
G KV FH+E+G N Y+A+LV+Y
Sbjct: 511 GLKVGFHVEEGSNAVYMAILVEY 579
>gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0003B13f, mRNA sequence
Length = 789
Score = 160 bits (343), Expect(3) = 7e-053
Identities = 59/99 (59%), Positives = 77/99 (77%)
Frame = +3 / +2
Query: 255 YKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAA 434
+K+VN+ PF +M +CGN P+FKDG GCG+C++IKC K CSG+ V ITDMNY P+A
Sbjct: 38 FKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNYYPVAP 217
Query: 435 YHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
YHFDL+GTAFG +AK G ++LR AGIID+QF RV C++
Sbjct: 218 YHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEF 334
Score = 51.5 bits (106), Expect(3) = 7e-053
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +3 / +2
Query: 663 KGSDTYEPLKHSWGAIWRKDSDKPIKGPITVRLTTEGGTKTVYDDVIPAEWKPN 824
+G + ++ SWG IWR DS+ ++ P ++R+ E G V VIP + +PN
Sbjct: 464 RGGGRWTRMRESWGFIWRLDSNHRLQAPFSIRIRNESGQTLVAR*VIPKKGRPN 625
Score = 35.0 bits (70), Expect(3) = 7e-053
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3 / +2
Query: 552 GSKVTFHLEKGCNPNYLALLVKY 620
G KV FH+E+G N Y+A+LV+Y
Sbjct: 338 GLKVGFHVEEGSNAVYMAILVEY 406
>gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021G03f, mRNA sequence
Length = 682
Score = 193 bits (415), Expect(2) = 7e-053
Identities = 73/125 (58%), Positives = 90/125 (72%)
Frame = +3 / +3
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 168 NWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 347
Query: 357 CDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 348 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 527
Query: 537 VKCKY 551
V C++
Sbjct: 528 VPCEF 542
Score = 122 bits (261), Expect(2) = 2e-029
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -1
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMMP R+FS P LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 535 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 356
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G+LPH M KG
Sbjct: 355 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 266
Score = 35.0 bits (70), Expect(2) = 7e-053
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3 / +2
Query: 555 SKVTFHLEKGCNPNYLALL 611
SKVTFH+E+G NP Y A+L
Sbjct: 548 SKVTFHVEQGSNPVYFAVL 604
Score = 27.2 bits (53), Expect(2) = 2e-029
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 604 AR*LGLHPFSKWKVTLD 554
A+ GL P S WKVTLD
Sbjct: 597 AKYTGLDPCSTWKVTLD 547
>gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL94h5 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 661
Score = 105 bits (224), Expect(3) = 5e-052
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +2
Query: 375 CSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 320 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 496
Score = 99.1 bits (210), Expect(3) = 5e-052
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +3 / +1
Query: 174 SDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEI 353
S WLDAKATWYG+PT +K+VN PF+SM +CGN P+FKDG GCGSC++I
Sbjct: 112 SSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQI 291
Query: 354 KC 359
+C
Sbjct: 292 RC 297
Score = 87.2 bits (184), Expect(3) = 6e-028
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -1 / -2
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
Y H TL NCM +MPA R+ S P+LAMAP AVP RSKW GS*FMSVM T G PEH+
Sbjct: 495 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHA 316
Score = 39.1 bits (79), Expect(3) = 5e-052
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3 / +2
Query: 552 GSKVTFHLEKGCNPNYLALLVKY 620
G VTFH+E+G NP Y+A+LV+Y
Sbjct: 500 GLTVTFHVEEGSNPFYMAILVEY 568
Score = 37.7 bits (76), Expect(3) = 6e-028
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -3
Query: 358 HLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
HLI Q+PQP PSLK G LP M KG T
Sbjct: 296 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 201
Score = 37.3 bits (75), Expect(3) = 6e-028
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2 / -1
Query: 255 THIRHHCRPGRHLLACHTMLPWHLAN 178
T R CR RH CHTM PW A+
Sbjct: 193 TRTRRRCRLARHRSVCHTMSPWRRAS 116
>gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. vulgare cDNA clone HA22I03
5-PRIME, mRNA sequence
Length = 597
Score = 105 bits (224), Expect(3) = 5e-052
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +1
Query: 375 CSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 274 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 450
Score = 99.1 bits (210), Expect(3) = 5e-052
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +3 / +1
Query: 174 SDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEI 353
S WLDAKATWYG+PT +K+VN PF+SM +CGN P+FKDG GCGSC++I
Sbjct: 67 SSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQI 246
Query: 354 KC 359
+C
Sbjct: 247 RC 252
Score = 86.8 bits (183), Expect(3) = 9e-028
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -1 / -2
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
Y H TL NCM +MPA R+ S P+LAMAP AVP RSKW GS*FMSVM T G PEH+
Sbjct: 449 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVFGTPEHA 270
Score = 39.1 bits (79), Expect(3) = 5e-052
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3 / +1
Query: 552 GSKVTFHLEKGCNPNYLALLVKY 620
G VTFH+E+G NP Y+A+LV+Y
Sbjct: 454 GLTVTFHVEEGSNPFYMAILVEY 522
Score = 37.7 bits (76), Expect(3) = 9e-028
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -2
Query: 358 HLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
HLI Q+PQP PSLK G LP M KG T
Sbjct: 251 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 156
Score = 37.3 bits (75), Expect(3) = 9e-028
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2 / -3
Query: 255 THIRHHCRPGRHLLACHTMLPWHLAN 178
T R CR RH CHTM PW A+
Sbjct: 148 TRTRRRCRLARHRSVCHTMSPWRRAS 71
>gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. vulgare cDNA clone HA05E07
5-PRIME, mRNA sequence
Length = 504
Score = 105 bits (224), Expect(3) = 5e-052
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +2
Query: 375 CSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 212 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 388
Score = 99.1 bits (210), Expect(3) = 5e-052
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +3 / +2
Query: 174 SDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEI 353
S WLDAKATWYG+PT +K+VN PF+SM +CGN P+FKDG GCGSC++I
Sbjct: 5 SSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQI 184
Query: 354 KC 359
+C
Sbjct: 185 RC 190
Score = 86.8 bits (183), Expect(3) = 9e-028
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -1 / -1
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
Y H TL NCM +MPA R+ S P+LAMAP AVP RSKW GS*FMSVM T G PEH+
Sbjct: 387 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVFGTPEHA 208
Score = 39.1 bits (79), Expect(3) = 5e-052
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3 / +2
Query: 552 GSKVTFHLEKGCNPNYLALLVKY 620
G VTFH+E+G NP Y+A+LV+Y
Sbjct: 392 GLTVTFHVEEGSNPFYMAILVEY 460
Score = 37.7 bits (76), Expect(3) = 9e-028
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -1
Query: 358 HLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
HLI Q+PQP PSLK G LP M KG T
Sbjct: 189 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 94
Score = 37.3 bits (75), Expect(3) = 9e-028
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 255 THIRHHCRPGRHLLACHTMLPWHLAN 178
T R CR RH CHTM PW A+
Sbjct: 86 TRTRRRCRLARHRSVCHTMSPWRRAS 9
>gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024E17f, mRNA sequence
Length = 875
Score = 193 bits (415), Expect(2) = 1e-051
Identities = 73/125 (58%), Positives = 90/125 (72%)
Frame = +3 / +3
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 177 NWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 356
Query: 357 CDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 357 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 536
Query: 537 VKCKY 551
V C++
Sbjct: 537 VPCEF 551
Score = 122 bits (261), Expect = 3e-027
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -2
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMMP R+FS P LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 544 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 365
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G+LPH M KG
Sbjct: 364 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 275
Score = 30.9 bits (61), Expect(2) = 1e-051
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1 / +3
Query: 574 WRRDATPTTWPCWSSTLMEMVTLWRWTSRR 663
W R T T PCW ST T WT R
Sbjct: 576 WSRGTTRCTSPCWWSTRTATGTWCMWTHGR 665
>gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL5B4 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 634
Score = 105 bits (224), Expect(3) = 2e-051
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +3
Query: 375 CSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 321 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 497
Score = 99.1 bits (210), Expect(3) = 2e-051
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +3 / +3
Query: 174 SDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEI 353
S WLDAKATWYG+PT +K+VN PF+SM +CGN P+FKDG GCGSC++I
Sbjct: 114 SSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQI 293
Query: 354 KC 359
+C
Sbjct: 294 RC 299
Score = 87.2 bits (184), Expect(3) = 6e-028
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -1 / -1
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
Y H TL NCM +MPA R+ S P+LAMAP AVP RSKW GS*FMSVM T G PEH+
Sbjct: 496 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHA 317
Score = 37.7 bits (76), Expect(3) = 6e-028
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -1
Query: 358 HLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
HLI Q+PQP PSLK G LP M KG T
Sbjct: 298 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 203
Score = 37.3 bits (75), Expect(3) = 2e-051
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1 / +1
Query: 574 WRRDATPTTWPCWSSTLMEMVTLWRWT 654
WRR T +TW W ST MEM WT
Sbjct: 523 WRRXRTRSTWQSWVSTRMEMAM*SSWT 603
Score = 37.3 bits (75), Expect(3) = 6e-028
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 255 THIRHHCRPGRHLLACHTMLPWHLAN 178
T R CR RH CHTM PW A+
Sbjct: 195 TRTRRRCRLARHRSVCHTMSPWRRAS 118
>gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020K03f, mRNA sequence
Length = 679
Score = 189 bits (407), Expect(2) = 2e-051
Identities = 72/124 (58%), Positives = 88/124 (70%)
Frame = +3 / +2
Query: 180 WLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIKC 359
W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+C
Sbjct: 188 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 367
Query: 360 DKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRV 539
CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKL +GIID+QF+RV
Sbjct: 368 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLPHSGIIDIQFKRV 547
Query: 540 KCKY 551
C++
Sbjct: 548 PCEF 559
Score = 119 bits (254), Expect = 3e-026
Identities = 56/90 (62%), Positives = 61/90 (67%)
Frame = -1 / -2
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMMP +FS P LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 552 HGTLLNWMSMMPECGSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 373
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G+LPH M KG
Sbjct: 372 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 283
Score = 33.6 bits (67), Expect(2) = 2e-051
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / +2
Query: 552 GSKVTFHLEKGCNPNYLALLVKY 620
G KVTFH+E+G NP Y LV +
Sbjct: 563 GLKVTFHVEQGSNPVYFPRLVGF 631
>gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020P05f, mRNA sequence
Length = 615
Score = 190 bits (410), Expect(2) = 1e-050
Identities = 72/125 (57%), Positives = 89/125 (71%)
Frame = +3 / +3
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT + + N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 180 NWEDARATWYGAPTGAGPMDDGGACGFNNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 359
Query: 357 CDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 360 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 539
Query: 537 VKCKY 551
V C++
Sbjct: 540 VPCEF 554
Score = 122 bits (261), Expect(2) = 8e-029
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -3
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMMP R+FS P LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 547 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 368
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G+LPH M KG
Sbjct: 367 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 278
Score = 29.9 bits (59), Expect(2) = 1e-050
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3 / +3
Query: 552 GSKVTFHLEKGCNPNYLAL 608
G VTFH+E G NP Y A+
Sbjct: 558 GLNVTFHVEXGSNPVYFAV 614
Score = 24.9 bits (48), Expect(2) = 8e-029
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1 / -3
Query: 604 AR*LGLHPFSKWKVTLDP 551
A+ G P S WKVTL P
Sbjct: 610 AKYTGFDPCSTWKVTLRP 557
>gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_H22 5', mRNA sequence
Length = 631
Score = 188 bits (405), Expect(2) = 4e-049
Identities = 72/129 (55%), Positives = 89/129 (68%)
Frame = +3 / +3
Query: 165 NYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSC 344
+Y S WL A+ATWYG P +K VN+ PF+SM +CGN P+FKDG GCGSC
Sbjct: 180 SYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGNQPLFKDGKGCGSC 359
Query: 345 FEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG V ITDMNY P+A YHFDL+GTAFGA+AK G EKLR +GIID+
Sbjct: 360 YQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSGIIDI 539
Query: 525 QFRRVKCKY 551
QF+RV C +
Sbjct: 540 QFKRVPCNF 566
Score = 106 bits (226), Expect = 2e-022
Identities = 54/95 (56%), Positives = 58/95 (61%)
Frame = -1 / -1
Query: 547 LHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSA 368
LH TL N MSMMP R+FS P LA AP AVP RSKWY A G *FMSV+ T + LPE
Sbjct: 562 LHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITVSMLPEQER 383
Query: 367 GLSHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
H I Q+PQP PSL G LP M KG FT
Sbjct: 382 SPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFT 278
Score = 27.2 bits (53), Expect(2) = 4e-049
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3 / +3
Query: 552 GSKVTFHLEKGCNPNYLALL 611
G K+ FH+ +G N YLA+L
Sbjct: 570 GLKINFHVVEGSNAVYLAVL 629
>gb|BQ753618.1|BQ753618 EBan01_SQ004_M07_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ004_M07 5', mRNA sequence
Length = 448
Score = 193 bits (416), Expect = 1e-048
Identities = 77/118 (65%), Positives = 85/118 (72%)
Frame = +3 / +2
Query: 126 GPPKVPPGKNITANYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGN 305
G KVP G NITANY S+W DAK TWYGKPT YK+V+KAPF M +CGN
Sbjct: 95 GIAKVPCGPNITANYVSEWKDAKTTWYGKPTGAGPKDNGGACGYKEVDKAPFFGMTSCGN 274
Query: 306 VPIFKDGLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAK 479
VPIFKD GCGSCFE+KC KP CSG+P +V ITD N EPIAAYHFDL+G AFG MAK
Sbjct: 275 VPIFKDSRGCGSCFELKCTKPEACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAK 448
Score = 107 bits (229), Expect = 8e-023
Identities = 48/72 (66%), Positives = 53/72 (73%)
Frame = -1 / -2
Query: 478 LAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAGLSHLISKQDPQPRPSLKIGTLP 299
LAM P A P RSKWYAAMGS F+SVM T G PE ++GL HL SKQ+PQPR SLK+GTLP
Sbjct: 447 LAMVPKAWPDRSKWYAAMGSSFLSVMVTMVGSPEQASGLVHLSSKQEPQPRLSLKMGTLP 268
Query: 298 HAPMLLKGALFT 263
M KGAL T
Sbjct: 267 QEVMPKKGALST 232
>gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002M09f, mRNA sequence
Length = 754
Score = 193 bits (415), Expect = 2e-048
Identities = 73/125 (58%), Positives = 90/125 (72%)
Frame = +3 / +3
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 189 NWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 368
Query: 357 CDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 369 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 548
Query: 537 VKCKY 551
V C++
Sbjct: 549 VPCEF 563
Score = 122 bits (261), Expect = 3e-027
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -1
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMMP R+FS P LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 556 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 377
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G+LPH M KG
Sbjct: 376 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 287
>gb|CA022206.1|CA022206 HZ42H09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42H09
5-PRIME, mRNA sequence
Length = 567
Score = 193 bits (415), Expect = 2e-048
Identities = 73/125 (58%), Positives = 90/125 (72%)
Frame = +3 / +3
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 186 NWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 365
Query: 357 CDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR +GIID+QF+R
Sbjct: 366 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKR 545
Query: 537 VKCKY 551
V C++
Sbjct: 546 VPCEF 560
Score = 122 bits (261), Expect = 3e-027
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -3
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMMP R+FS P LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 553 HGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 374
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G+LPH M KG
Sbjct: 373 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 284
>gb|CV063456.1|CV063456 BNEL8E2 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL8E2 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 546
Score = 105 bits (224), Expect(3) = 3e-048
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +1
Query: 375 CSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 319 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 495
Score = 99.1 bits (210), Expect(3) = 3e-048
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +3 / +1
Query: 174 SDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEI 353
S WLDAKATWYG+PT +K+VN PF+SM +CGN P+FKDG GCGSC++I
Sbjct: 112 SSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQI 291
Query: 354 KC 359
+C
Sbjct: 292 RC 297
Score = 87.2 bits (184), Expect(3) = 6e-028
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -1 / -2
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
Y H TL NCM +MPA R+ S P+LAMAP AVP RSKW GS*FMSVM T G PEH+
Sbjct: 494 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHA 315
Score = 37.7 bits (76), Expect(3) = 6e-028
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -2
Query: 358 HLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
HLI Q+PQP PSLK G LP M KG T
Sbjct: 296 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 201
Score = 37.3 bits (75), Expect(3) = 6e-028
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2 / -3
Query: 255 THIRHHCRPGRHLLACHTMLPWHLAN 178
T R CR RH CHTM PW A+
Sbjct: 193 TRTRRRCRLARHRSVCHTMSPWRRAS 116
Score = 26.3 bits (51), Expect(3) = 3e-048
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 552 GSKVTFHLEKGCNP 593
G VTFH+E+G NP
Sbjct: 499 GLTVTFHVEEGSNP 540
>gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. vulgare cDNA clone HV14A15
5-PRIME, mRNA sequence
Length = 616
Score = 175 bits (376), Expect(2) = 2e-047
Identities = 66/121 (54%), Positives = 85/121 (70%)
Frame = +3 / +1
Query: 189 AKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIKCDKP 368
A+ATWYG P +K+VN+ PF +M +CGN P+FKDG GCG+C++IKC K
Sbjct: 76 ARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKH 255
Query: 369 AECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCK 548
CSG+ V ITDMNY P+A YHFDL+GTAFG +AK G ++LR AGIID+QF RV C+
Sbjct: 256 KACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACE 435
Query: 549 Y 551
+
Sbjct: 436 F 438
Score = 35.0 bits (70), Expect(2) = 2e-047
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3 / +1
Query: 552 GSKVTFHLEKGCNPNYLALLVKY 620
G KV FH+E+G N Y+A+LV+Y
Sbjct: 442 GLKVGFHVEEGSNAVYMAILVEY 510
>gb|CA022237.1|CA022237 HZ42I19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42I19
5-PRIME, mRNA sequence
Length = 539
Score = 189 bits (408), Expect = 2e-047
Identities = 73/129 (56%), Positives = 89/129 (68%)
Frame = +3 / +1
Query: 165 NYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSC 344
+Y S WL A+ATWYG P +K VN+ PF+SM +CGN P+FKDG GCGSC
Sbjct: 145 SYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGNQPLFKDGKGCGSC 324
Query: 345 FEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG V ITDMNY P+A YHFDL+GTAFGA+AK G EKLR +GIID+
Sbjct: 325 YQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSGIIDI 504
Query: 525 QFRRVKCKY 551
QFRRV C +
Sbjct: 505 QFRRVPCNF 531
Score = 106 bits (226), Expect = 2e-022
Identities = 54/95 (56%), Positives = 58/95 (61%)
Frame = -1 / -1
Query: 547 LHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSA 368
LH TL N MSMMP R+FS P LA AP AVP RSKWY A G *FMSV+ T + LPE
Sbjct: 527 LHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITVSMLPEQER 348
Query: 367 GLSHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
H I Q+PQP PSL G LP M KG FT
Sbjct: 347 SPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFT 243
>gb|CA023986.1|CA023986 HZ48A15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48A15
5-PRIME, mRNA sequence
Length = 584
Score = 189 bits (408), Expect = 2e-047
Identities = 73/129 (56%), Positives = 89/129 (68%)
Frame = +3 / +2
Query: 165 NYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSC 344
+Y S WL A+ATWYG P +K VN+ PF+SM +CGN P+FKDG GCGSC
Sbjct: 194 SYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGNQPLFKDGKGCGSC 373
Query: 345 FEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG V ITDMNY P+A YHFDL+GTAFGA+AK G EKLR +GIID+
Sbjct: 374 YQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSGIIDI 553
Query: 525 QFRRVKCKY 551
QFRRV C +
Sbjct: 554 QFRRVPCNF 580
Score = 106 bits (226), Expect = 2e-022
Identities = 54/95 (56%), Positives = 58/95 (61%)
Frame = -1 / -3
Query: 547 LHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSA 368
LH TL N MSMMP R+FS P LA AP AVP RSKWY A G *FMSV+ T + LPE
Sbjct: 576 LHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITVSMLPEQER 397
Query: 367 GLSHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
H I Q+PQP PSL G LP M KG FT
Sbjct: 396 SPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFT 292
>gb|BM442635.2|BM442635 EBan01_SQ003_L19_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_L19 5', mRNA sequence
Length = 411
Score = 134 bits (288), Expect(2) = 3e-047
Identities = 51/72 (70%), Positives = 61/72 (84%)
Frame = +3 / +3
Query: 336 GSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGI 515
GSCFE+KC KP CSG+P +V ITD N EPIAAYHFDL+G AFG MAKKG+E+KLR AG
Sbjct: 3 GSCFELKCTKPEACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAKKGQEQKLRDAGE 182
Query: 516 IDMQFRRVKCKY 551
++++FRRVKCKY
Sbjct: 183 VEIKFRRVKCKY 218
Score = 110 bits (234), Expect(2) = 2e-026
Identities = 48/80 (60%), Positives = 56/80 (70%)
Frame = -1 / -3
Query: 574 KWKVTLDPYLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYT 395
K+ + YLHLT RN +S PA R+F S PFLAM P A P RSKWYAAMGS F+SVM T
Sbjct: 241 KFTLVPSGYLHLTRRNLISTSPASRSFCSWPFLAMVPKAWPDRSKWYAAMGSSFLSVMVT 62
Query: 394 TTGLPEHSAGLSHLISKQDP 335
G PE ++GL HL SKQ+P
Sbjct: 61 MVGSPEQASGLVHLSSKQEP 2
Score = 74.4 bits (156), Expect(2) = 3e-047
Identities = 29/64 (45%), Positives = 39/64 (60%)
Frame = +3 / +3
Query: 534 RVKCKYGSKVTFHLEKGCNPNYLALLVKYXXXXXXXXXXXXKEKGSDTYEPLKHSWGAIW 713
+ K G+KV FH+EKG +PNYLAL++K+ K KG D + LK SWGA+W
Sbjct: 207 KCKYPEGTKVNFHVEKGSSPNYLALVIKFLQGDGDVVAVDIKPKGKDKWIELKESWGAVW 386
Query: 714 RKDS 725
R D+
Sbjct: 387 RIDT 398
Score = 29.0 bits (57), Expect(2) = 2e-026
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2 / -1
Query: 618 T*PTGPGSWGCIPSPNGR*P 559
T* G GSWG PSP G P
Sbjct: 291 T*SPGRGSWGWSPSPRGSSP 232
>gb|BI956858.1|BI956858 HVSMEn0005K24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005K24f, mRNA sequence
Length = 812
Score = 123 bits (264), Expect(3) = 5e-047
Identities = 47/71 (66%), Positives = 57/71 (80%)
Frame = +3 / +1
Query: 324 GLGCGSCFEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLR 503
G GCGSC++I+C A CSG P V ITDMNY P++ YHFDL+GTAFGAMAK G+ ++LR
Sbjct: 178 GXGCGSCYQIRCVAHATCSGVPETVIITDMNYYPVSRYHFDLSGTAFGAMAKDGQNDELR 357
Query: 504 KAGIIDMQFRR 536
AGIIDMQF+R
Sbjct: 358 HAGIIDMQFKR 390
Score = 88.1 bits (186), Expect(3) = 1e-027
Identities = 42/71 (59%), Positives = 46/71 (64%)
Frame = -1 / -1
Query: 535 LRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAGLSH 356
L NCMSMMPA R+ S P LAMAP AVP RSKW G *FMSVM T +G PE A +H
Sbjct: 389 LLNCMSMMPAWRSSSFWPSLAMAPKAVPLRSKW*RDTG**FMSVMITVSGTPEQVA*ATH 210
Query: 355 LISKQDPQPRP 323
LI +P P P
Sbjct: 209 LIW*HEPHPSP 177
Score = 66.1 bits (138), Expect(3) = 5e-047
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +3 / +2
Query: 147 GKNITANYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDG 326
G + T G WL+A+ATWYG P +K+VN PFN+M +CGN P+FK G
Sbjct: 2 GGSGTKGDGGGWLNARATWYGAPGGAGPDDNGGACGFKNVNLPPFNAMTSCGNEPLFKGG 181
Score = 50.1 bits (103), Expect(3) = 1e-027
Identities = 25/54 (46%), Positives = 30/54 (55%)
Frame = -3 / -2
Query: 320 LEDRDVATCAHAVERGLVHVLVPTSATIVVRAGTCWLAIPCCLGI*PITTIVGC 159
LE+R +A H VER VHVL P ATIVVR G A+P G+ P + C
Sbjct: 175 LEERLIAARRHGVERRQVHVLEPACATIVVRPGAAGSAVPGGPGVEPPAPVPLC 14
Score = 41.4 bits (84), Expect(3) = 5e-047
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3 / +3
Query: 552 GSKVTFHLEKGCNPNYLALLVKY 620
G VTFH+E+G NPNYLA+ V+Y
Sbjct: 546 GLSVTFHVEQGSNPNYLAIPVEY 614
Score = 27.6 bits (54), Expect(3) = 1e-027
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1 / -2
Query: 619 YLTNRAR*LGLHPFSKWKVTLDP 551
Y T AR* G P S W VT +P
Sbjct: 613 YSTGIAR*FGFDPCSTWNVTDNP 545
>gb|BI959378.1|BI959378 HVSMEn0019H04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019H04f, mRNA sequence
Length = 663
Score = 188 bits (404), Expect = 6e-047
Identities = 72/124 (58%), Positives = 88/124 (70%)
Frame = +3 / +3
Query: 177 DWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIK 356
+W DA+ATWYG PT +K+ N+ PF+SM +CGN PIFKDG GCGSC++I+
Sbjct: 189 NWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIR 368
Query: 357 CDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRR 536
C CSG P V ITDMNY P+A YHFDL+GTAFGAMAK G EKLR + IID+QF+R
Sbjct: 369 CTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSRIIDIQFKR 548
Query: 537 VKCK 548
V C+
Sbjct: 549 VPCE 560
Score = 120 bits (257), Expect = 1e-026
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = -1 / -3
Query: 544 HLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSAG 365
H TL N MSMM R+FS SP LAMAPNAVP RSKWY A G *FMSVM T +GLPE
Sbjct: 556 HGTLLNWMSMMRECRSFSLSPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWS 377
Query: 364 LSHLISKQDPQPRPSLKIGTLPHAPMLLKG 275
L H I Q+P P PSLK+G+LPH M KG
Sbjct: 376 LVHRIW*QEPHPLPSLKMGSLPHDVMEEKG 287
>gb|CV060955.1|CV060955 BNEL63c5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL63c5 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 634
Score = 99.1 bits (210), Expect(4) = 6e-047
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +3 / +2
Query: 174 SDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEI 353
S WLDAKATWYG+PT +K+VN PF+SM +CGN P+FKDG GCGSC++I
Sbjct: 56 SSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQI 235
Query: 354 KC 359
+C
Sbjct: 236 RC 241
Score = 54.7 bits (113), Expect(4) = 6e-047
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +3 / +2
Query: 375 CSGKPVVVYITDMNYEPIAAYHFDLAGT 458
CSG P V ITDMNY+P++ YHFDL+GT
Sbjct: 263 CSGVPKTVIITDMNYDPVSRYHFDLSGT 346
Score = 51.9 bits (107), Expect(4) = 6e-047
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3 / +3
Query: 459 AFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
AFG MAK G ++LR AGII+MQF+RV C+Y
Sbjct: 348 AFGGMAKYGRNDELRHAGIINMQFKRVPCQY 440
Score = 45.1 bits (92), Expect(4) = 4e-023
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = -1 / -2
Query: 457 VPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
VP RSKW GS*FMSVM T G PEH+
Sbjct: 345 VPLRSKW*RETGS*FMSVMITVLGTPEHA 259
Score = 42.8 bits (87), Expect(4) = 4e-023
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -1 / -1
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNA 458
Y H TL NCM +MPA R+ S P+LAM P A
Sbjct: 439 YWHGTLLNCMLIMPAWRSSSLRPYLAMPPKA 347
Score = 38.6 bits (78), Expect(4) = 6e-047
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1 / +1
Query: 568 SIWRRDATPTTWPCWSSTLMEMVTLWRWT 654
S WRR T +TW W ST MEM WT
Sbjct: 460 STWRRGRTRSTWASWWSTRMEMAM*SNWT 546
Score = 37.7 bits (76), Expect(4) = 4e-023
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -2
Query: 358 HLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
HLI Q+PQP PSLK G LP M KG T
Sbjct: 240 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 145
Score = 37.3 bits (75), Expect(4) = 4e-023
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2 / -3
Query: 255 THIRHHCRPGRHLLACHTMLPWHLAN 178
T R CR RH CHTM PW A+
Sbjct: 137 TRTRRRCRLARHRSVCHTMSPWRRAS 60
>gb|AV923254.1|AV923254 AV923254 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd12g18 5', mRNA sequence
Length = 616
Score = 187 bits (403), Expect = 8e-047
Identities = 72/129 (55%), Positives = 89/129 (68%)
Frame = +3 / +1
Query: 165 NYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSC 344
+Y S WL A+ATWYG P +K VN+ PF+SM +CG+ P+FKDG GCGSC
Sbjct: 196 SYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGSQPLFKDGKGCGSC 375
Query: 345 FEIKCDKPAECSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDM 524
++I+C CSG V ITDMNY P+A YHFDL+GTAFGA+AK G EKLR +GIID+
Sbjct: 376 YQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSGIIDI 555
Query: 525 QFRRVKCKY 551
QFRRV C +
Sbjct: 556 QFRRVPCNF 582
Score = 106 bits (226), Expect = 2e-022
Identities = 54/95 (56%), Positives = 58/95 (61%)
Frame = -1 / -3
Query: 547 LHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHSA 368
LH TL N MSMMP R+FS P LA AP AVP RSKWY A G *FMSV+ T + LPE
Sbjct: 578 LHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITVSMLPEQER 399
Query: 367 GLSHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
H I Q+PQP PSL G LP M KG FT
Sbjct: 398 SPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFT 294
>gb|AL504600.1|AL504600 AL504600 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05M13V 5', mRNA sequence
Length = 700
Score = 95.5 bits (202), Expect(3) = 1e-046
Identities = 35/66 (53%), Positives = 43/66 (65%)
Frame = +3 / +3
Query: 165 NYGSDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSC 344
+Y S WL AKATWYG P +K+VN+ P +SMGACGN PI+ DG GCG C
Sbjct: 198 SYNSGWLPAKATWYGAPNGPGPDDNGGACGFKNVNQYPISSMGACGNEPIYADGEGCGMC 377
Query: 345 FEIKCD 362
+EIKC+
Sbjct: 378 YEIKCE 395
Score = 88.1 bits (186), Expect(3) = 1e-046
Identities = 35/53 (66%), Positives = 42/53 (79%)
Frame = +3 / +3
Query: 375 CSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFR 533
CSG+P + I DMNY P+A YH DL+GTAFG+MA+ G E+LR AGIIDMQFR
Sbjct: 414 CSGQPRRIVIIDMNYYPVARYHLDLSGTAFGSMARYGLNEQLRHAGIIDMQFR 572
Score = 77.6 bits (163), Expect(2) = 1e-021
Identities = 33/51 (64%), Positives = 37/51 (72%)
Frame = -1 / -1
Query: 529 NCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPE 377
NCMSMMPA R+ S P+LAM PNAVP RS+WY A G *FMS+M G PE
Sbjct: 568 NCMSMMPAWRSCSLRPYLAMEPNAVPLRSRWYLATG**FMSMMTILLGWPE 416
Score = 45.5 bits (93), Expect(2) = 1e-021
Identities = 21/33 (63%), Positives = 22/33 (66%)
Frame = -1 / -1
Query: 361 SHLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
SHLIS PQP PS IG+LPHAPM G FT
Sbjct: 394 SHLIS*HMPQPSPSAYIGSLPHAPMEEIGYWFT 296
Score = 41.8 bits (85), Expect(3) = 1e-046
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 552 GSKVTFHLEKGCNPNYLALLV 614
G K+TFH+++G NPNYLA+LV
Sbjct: 595 GMKITFHVQRGSNPNYLAVLV 657
>gb|CV061225.1|CV061225 BNEL66d10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL66d10 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 539
Score = 105 bits (224), Expect(3) = 6e-046
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +3 / +1
Query: 375 CSGKPVVVYITDMNYEPIAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKY 551
CSG P V ITDMNY+P++ YHFDL+GTAFGAMAK G ++LR AGII+MQF+RV C+Y
Sbjct: 319 CSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQY 495
Score = 99.1 bits (210), Expect(3) = 6e-046
Identities = 35/62 (56%), Positives = 44/62 (70%)
Frame = +3 / +1
Query: 174 SDWLDAKATWYGKPTXXXXXXXXXXXXYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEI 353
S WLDAKATWYG+PT +K+VN PF+SM +CGN P+FKDG GCGSC++I
Sbjct: 112 SSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQI 291
Query: 354 KC 359
+C
Sbjct: 292 RC 297
Score = 87.2 bits (184), Expect(3) = 6e-028
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = -1 / -1
Query: 550 YLHLTLRNCMSMMPALRNFSSSPFLAMAPNAVPARSKWYAAMGS*FMSVMYTTTGLPEHS 371
Y H TL NCM +MPA R+ S P+LAMAP AVP RSKW GS*FMSVM T G PEH+
Sbjct: 494 YWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHA 315
Score = 37.7 bits (76), Expect(3) = 6e-028
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -1
Query: 358 HLISKQDPQPRPSLKIGTLPHAPMLLKGALFT 263
HLI Q+PQP PSLK G LP M KG T
Sbjct: 296 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLT 201
Score = 37.3 bits (75), Expect(3) = 6e-028
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 255 THIRHHCRPGRHLLACHTMLPWHLAN 178
T R CR RH CHTM PW A+
Sbjct: 193 TRTRRRCRLARHRSVCHTMSPWRRAS 116
Score = 21.7 bits (41), Expect(3) = 6e-046
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3 / +1
Query: 561 VTFHLEKGCN 590
VTFH+E+G N
Sbjct: 508 VTFHVEEGSN 537
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 515,087,579
Number of Sequences: 312970
Number of extensions: 10645914
Number of successful extensions: 114536
Number of sequences better than 1.0e-020: 178
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 11831150659
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)