TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3276111.2.1
(1393 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ469352.1|BQ469352 HM04E11r HM Hordeum vulgare subsp. v... 122 2e-057
gb|BM442197.2|BM442197 EBan01_SQ002_I02_R anther, yellow st... 158 1e-054
emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cystein... 75 2e-050
emb|Z97023.1|HVZ97023 Hordeum vulgare mRNA encoding cystein... 68 2e-047
emb|A98645.1| Sequence 1 from Patent WO9910500 96 2e-046
gb|BG300443.1|BG300443 HVSMEb0017B09f Hordeum vulgare seedl... 101 8e-046
gb|U19384.1|HVU19384 Hordeum vulgare cysteine proteinase EP... 68 8e-046
gb|U19359.1|HVU19359 Hordeum vulgare cysteine proteinase EP... 68 2e-045
gb|BG310420.1|BG310420 HVSMEc0018J22f Hordeum vulgare seedl... 99 5e-045
gb|AV926718.1|AV926718 AV926718 K. Sato unpublished cDNA li... 98 1e-044
gb|BE455678.3|BE455678 HVSMEg0018N22f Hordeum vulgare pre-a... 122 2e-044
gb|BF628998.2|BF628998 HVSMEb0009I02f Hordeum vulgare seedl... 101 2e-041
gb|CA018921.1|CA018921 HV10A20r HV Hordeum vulgare subsp. v... 65 3e-040
gb|BI952590.1|BI952590 HVSMEm0007B06f Hordeum vulgare green... 104 4e-040
gb|BG415364.1|BG415364 HVSMEk0006D05f Hordeum vulgare testa... 63 3e-039
gb|CA018792.1|CA018792 HV09K16r HV Hordeum vulgare subsp. v... 68 2e-038
gb|AV923200.1|AV923200 AV923200 K. Sato unpublished cDNA li... 101 9e-038
gb|BJ472680.1|BJ472680 BJ472680 K. Sato unpublished cDNA li... 63 2e-037
gb|AV917445.1|AV917445 AV917445 K. Sato unpublished cDNA li... 101 6e-037
gb|AV924415.1|AV924415 AV924415 K. Sato unpublished cDNA li... 101 6e-037
gb|AV927028.1|AV927028 AV927028 K. Sato unpublished cDNA li... 101 6e-037
gb|CA021721.1|CA021721 HZ40O14r HZ Hordeum vulgare subsp. v... 92 5e-036
emb|Z97021.1|HVZ97021 Hordeum vulgare gene encoding cystein... 64 6e-036
gb|BU994426.1|BU994426 HM07A13r HM Hordeum vulgare subsp. v... 149 2e-035
gb|CA013849.1|CA013849 HT09K13r HT Hordeum vulgare subsp. v... 68 5e-035
gb|AL500436.1|AL500436 AL500436 Hordeum vulgare Barke etiol... 98 9e-035
gb|AV925578.1|AV925578 AV925578 K. Sato unpublished cDNA li... 101 1e-034
gb|AV926595.1|AV926595 AV926595 K. Sato unpublished cDNA li... 101 1e-034
gb|AV925239.1|AV925239 AV925239 K. Sato unpublished cDNA li... 101 1e-034
gb|AV925573.1|AV925573 AV925573 K. Sato unpublished cDNA li... 101 1e-034
gb|AV925582.1|AV925582 AV925582 K. Sato unpublished cDNA li... 101 1e-034
gb|AV927005.1|AV927005 AV927005 K. Sato unpublished cDNA li... 101 1e-034
gb|AV926964.1|AV926964 AV926964 K. Sato unpublished cDNA li... 101 1e-034
gb|AV925173.1|AV925173 AV925173 K. Sato unpublished cDNA li... 101 1e-034
gb|BF628689.3|BF628689 HVSMEb0007C07f Hordeum vulgare seedl... 97 1e-034
gb|AV927641.1|AV927641 AV927641 K. Sato unpublished cDNA li... 61 1e-034
gb|AV931616.1|AV931616 AV931616 K. Sato unpublished cDNA li... 64 6e-034
gb|BG343507.1|BG343507 HVSMEg0005P07f Hordeum vulgare pre-a... 61 2e-032
gb|BF618995.2|BF618995 HVSMEc0008F14f Hordeum vulgare seedl... 101 3e-032
gb|AV926725.1|AV926725 AV926725 K. Sato unpublished cDNA li... 98 4e-032
gb|CK122888.1|CK122888 BES1824101b11 BES1824 Hordeum vulgar... 64 9e-032
gb|AV924784.1|AV924784 AV924784 K. Sato unpublished cDNA li... 101 1e-031
gb|AV926982.1|AV926982 AV926982 K. Sato unpublished cDNA li... 101 1e-031
gb|BI950636.1|BI950636 HVSMEl0021N14f Hordeum vulgare spike... 64 2e-031
gb|AV924189.1|AV924189 AV924189 K. Sato unpublished cDNA li... 69 5e-031
gb|BF630395.3|BF630395 HVSMEb0009B06f Hordeum vulgare seedl... 64 1e-030
gb|CA020367.1|CA020367 HZ36B11r HZ Hordeum vulgare subsp. v... 59 2e-030
gb|AV924771.1|AV924771 AV924771 K. Sato unpublished cDNA li... 101 3e-030
gb|AV922852.1|AV922852 AV922852 K. Sato unpublished cDNA li... 61 1e-029
gb|AV926076.1|AV926076 AV926076 K. Sato unpublished cDNA li... 61 1e-029
gb|AV926075.1|AV926075 AV926075 K. Sato unpublished cDNA li... 61 2e-029
gb|AV926087.1|AV926087 AV926087 K. Sato unpublished cDNA li... 61 2e-029
gb|AV922923.1|AV922923 AV922923 K. Sato unpublished cDNA li... 61 3e-029
gb|AV926328.1|AV926328 AV926328 K. Sato unpublished cDNA li... 61 5e-029
gb|BU979600.1|BU979600 HA16K22r HA Hordeum vulgare subsp. v... 64 6e-029
gb|CA018842.1|CA018842 HV09N03r HV Hordeum vulgare subsp. v... 64 7e-029
gb|BF621715.2|BF621715 HVSMEa0011P20f Hordeum vulgare seedl... 92 1e-028
gb|BE216298.2|BE216298 HV_CEb0010C01f Hordeum vulgare seedl... 68 3e-028
gb|BJ464204.1|BJ464204 BJ464204 K. Sato unpublished cDNA li... 61 4e-028
gb|AL450540.1|AL450540 AL450540 Hordeum vulgare Barke etiol... 98 5e-028
gb|BM442118.2|BM442118 EBan01_SQ002_E07_R anther, yellow st... 124 1e-027
gb|BE558716.3|BE558716 HV_CEb0020C14f Hordeum vulgare seedl... 68 2e-027
gb|BI952787.1|BI952787 HVSMEm0007M17f Hordeum vulgare green... 101 2e-027
gb|BQ471297.1|BQ471297 HV02B01r HV Hordeum vulgare subsp. v... 68 4e-027
gb|BM442282.2|BM442282 EBan01_SQ002_M05_R anther, yellow st... 122 5e-027
gb|AV924648.1|AV924648 AV924648 K. Sato unpublished cDNA li... 61 7e-026
gb|AV915782.1|AV915782 AV915782 K. Sato unpublished cDNA li... 100 9e-026
gb|AV929504.1|AV929504 AV929504 K. Sato unpublished cDNA li... 64 9e-026
tpe|BN000093.1|HVA000093 TPA: Hordeum vulgare mRNA for a se... 52 1e-025
gb|BF619874.2|BF619874 HVSMEc0009I12f Hordeum vulgare seedl... 89 1e-025
gb|AL505180.1|AL505180 AL505180 Hordeum vulgare Barke roots... 62 2e-025
gb|CB876932.1|CB876932 HP02O19T HP Hordeum vulgare subsp. v... 64 2e-025
gb|BG300664.1|BG300664 HVSMEb0017O03f Hordeum vulgare seedl... 101 2e-025
gb|BE558904.2|BE558904 HV_CEb0020L18f Hordeum vulgare seedl... 54 2e-025
gb|BI960036.1|BI960036 HVSMEn0022P09f Hordeum vulgare rachi... 61 2e-025
gb|BF256657.2|BF256657 HVSMEf0010J23f Hordeum vulgare seedl... 53 2e-025
gb|CB878231.1|CB878231 HP07M15T HP Hordeum vulgare subsp. v... 63 2e-025
gb|BG415734.2|BG415734 HVSMEk0007K06f Hordeum vulgare testa... 57 3e-025
gb|CB879350.1|CB879350 HP11N16T HP Hordeum vulgare subsp. v... 65 7e-025
gb|CA031300.1|CA031300 HX09I24r HX Hordeum vulgare subsp. v... 64 8e-025
gb|BF628094.1|BF628094 HVSMEb0003B22f Hordeum vulgare seedl... 101 1e-024
gb|CB876765.1|CB876765 HP02F10T HP Hordeum vulgare subsp. v... 98 1e-024
gb|CB879599.1|CB879599 HP02O19w HP Hordeum vulgare subsp. v... 64 1e-024
gb|BG414929.1|BG414929 HVSMEk0004E19f Hordeum vulgare testa... 64 1e-024
gb|BF267721.2|BF267721 HV_CEa0018L07f Hordeum vulgare seedl... 69 2e-024
gb|BI959700.1|BI959700 HVSMEn0020N17f Hordeum vulgare rachi... 61 3e-024
gb|AV833271.1|AV833271 AV833271 K. Sato unpublished cDNA li... 56 4e-024
gb|AV926318.1|AV926318 AV926318 K. Sato unpublished cDNA li... 59 5e-024
gb|CB879132.1|CB879132 HP11A19T HP Hordeum vulgare subsp. v... 107 7e-024
gb|CD663813.1|CD663813 UCRHV18_06ch09_b1 Drought-stressed D... 107 7e-024
gb|BG415730.2|BG415730 HVSMEk0007J21f Hordeum vulgare testa... 57 9e-024
gb|BM442325.2|BM442325 EBan01_SQ002_O01_R anther, yellow st... 111 9e-024
gb|AV923091.1|AV923091 AV923091 K. Sato unpublished cDNA li... 64 1e-023
gb|BJ472478.1|BJ472478 BJ472478 K. Sato unpublished cDNA li... 61 1e-023
gb|BQ464939.1|BQ464939 HU02D03r HU Hordeum vulgare subsp. v... 64 1e-023
gb|AL503956.1|AL503956 AL503956 Hordeum vulgare Barke roots... 63 1e-023
gb|BM816472.1|BM816472 HB106F05_SK.ab1 HB Hordeum vulgare s... 52 1e-023
gb|BI956727.1|BI956727 HVSMEn0005A04f Hordeum vulgare rachi... 59 2e-023
gb|AL499690.1|AL499690 AL499690 Hordeum vulgare Barke etiol... 51 3e-023
gb|AL500385.1|AL500385 AL500385 Hordeum vulgare Barke etiol... 51 3e-023
gb|AV927476.1|AV927476 AV927476 K. Sato unpublished cDNA li... 51 3e-023
gb|BF618525.2|BF618525 HVSMEc0005O22f Hordeum vulgare seedl... 104 3e-023
gb|AL450698.1|AL450698 AL450698 Hordeum vulgare Barke etiol... 59 4e-023
gb|BQ471140.1|BQ471140 HV01B20T HV Hordeum vulgare subsp. v... 69 5e-023
gb|BI951599.1|BI951599 HVSMEm0001J09f Hordeum vulgare green... 61 6e-023
gb|BF627029.3|BF627029 HVSMEb0002A10f Hordeum vulgare seedl... 52 2e-022
gb|BJ466665.1|BJ466665 BJ466665 K. Sato unpublished cDNA li... 102 2e-022
gb|BJ470713.1|BJ470713 BJ470713 K. Sato unpublished cDNA li... 61 2e-022
gb|BG299613.1|BG299613 HVSMEa0021A20f Hordeum vulgare seedl... 52 3e-022
gb|BG414819.1|BG414819 HVSMEk0003N11f Hordeum vulgare testa... 48 3e-022
gb|AV930489.1|AV930489 AV930489 K. Sato unpublished cDNA li... 51 4e-022
gb|BE196180.3|BE196180 HVSMEh0091J08f Hordeum vulgare 5-45 ... 59 5e-022
gb|AV931213.1|AV931213 AV931213 K. Sato unpublished cDNA li... 51 5e-022
gb|AV931202.1|AV931202 AV931202 K. Sato unpublished cDNA li... 51 5e-022
gb|AL501368.1|AL501368 AL501368 Hordeum vulgare Barke roots... 63 5e-022
gb|CA026404.1|CA026404 HZ55N04r HZ Hordeum vulgare subsp. v... 63 5e-022
gb|BQ472128.1|BQ472128 HV04H20r HV Hordeum vulgare subsp. v... 68 7e-022
gb|BU999912.1|BU999912 HS16O03u HS Hordeum vulgare subsp. v... 60 7e-022
gb|AV929283.1|AV929283 AV929283 K. Sato unpublished cDNA li... 64 8e-022
gb|AV930959.1|AV930959 AV930959 K. Sato unpublished cDNA li... 51 1e-021
gb|BF256720.2|BF256720 HVSMEf0010N02f Hordeum vulgare seedl... 55 1e-021
gb|CB876878.1|CB876878 HP02L18T HP Hordeum vulgare subsp. v... 98 1e-021
gb|AL500308.1|AL500308 AL500308 Hordeum vulgare Barke etiol... 46 2e-021
gb|CB884194.1|CB884194 HV08J05u HV Hordeum vulgare subsp. v... 58 2e-021
gb|BG365693.2|BG365693 HVSMEi0003M06f Hordeum vulgare 20 DA... 61 3e-021
gb|AF134153.1|AF134153 Hordeum vulgare cysteine protease mR... 56 3e-021
gb|BQ664085.1|BQ664085 HV01L06w HV Hordeum vulgare subsp. v... 58 3e-021
gb|BQ471157.1|BQ471157 HV01F03T HV Hordeum vulgare subsp. v... 69 3e-021
gb|CB884207.1|CB884207 HV11M07r HV Hordeum vulgare subsp. v... 69 3e-021
gb|AJ461308.1|AJ461308 AJ461308 S00002 Hordeum vulgare subs... 102 5e-021
gb|CA001622.1|CA001622 HS05B16r HS Hordeum vulgare subsp. v... 64 6e-021
gb|AV931203.1|AV931203 AV931203 K. Sato unpublished cDNA li... 51 6e-021
gb|BM096938.2|BM096938 EBpi07_SQ001_N17_R pistil, 12 DPA, n... 55 8e-021
gb|BQ762725.1|BQ762725 EBro02_SQ004_J24 _R root, 3 week, hy... 72 9e-021
gb|BQ763183.1|BQ763183 EBro02_SQ007_A15_R root, 3 week, hyd... 72 9e-021
>gb|BQ469352.1|BQ469352 HM04E11r HM Hordeum vulgare subsp. vulgare cDNA clone HM04E11
5-PRIME, mRNA sequence
Length = 629
Score = 122 bits (262), Expect(2) = 2e-057
Identities = 55/100 (55%), Positives = 64/100 (64%)
Frame = +1 / +2
Query: 79 IMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEA 258
I+LA LMMDRF WQAT+NRSY +AEER RRFQVY N+E+I+A
Sbjct: 53 ILLARGLFAAFPAASVDMGDMLMMDRFRQWQATHNRSYLSAEERLRRFQVYSDNVEYIDA 232
Query: 259 TNRAGNLTYTLGENQFADLTEEEFLDLYTMKGMPVRRDAG 378
TNR G+LTY LGEN+FADLT+EEFL Y DAG
Sbjct: 233 TNRRGDLTYELGENEFADLTQEEFLARYASSYDGTGDDAG 352
Score = 121 bits (258), Expect(2) = 2e-057
Identities = 45/62 (72%), Positives = 52/62 (83%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCN 615
DWRSKGAVTP+K QG C+SCWAFVT ATIE++ I T KLV+LSEQ+L+DCD YDGGCN
Sbjct: 443 DWRSKGAVTPVKTQGSGCASCWAFVTVATIETLNWIRTXKLVALSEQQLVDCDQYDGGCN 622
Query: 616 LG 621
G
Sbjct: 623 KG 628
Score = 74.4 bits (156), Expect(2) = 4e-028
Identities = 35/51 (68%), Positives = 36/51 (70%)
Frame = -3 / -3
Query: 308 ANWFSPSVYVRLPARLVASMCSMLRRYTWNRRCLSSAVGYDRLYVACQLRN 156
AN FSPS VR P RLVASM S L YTW RR LSSA+ YDRL VAC RN
Sbjct: 282 ANSFSPSS*VRSPRRLVASMYSTLSLYTWKRRSLSSALRYDRLCVACHWRN 130
Score = 74.4 bits (156), Expect(2) = 4e-028
Identities = 35/69 (50%), Positives = 40/69 (57%)
Frame = -3 / -3
Query: 620 PRLQPPXXXXXXXXXXXXXXXSFPVVILVMLSIVAAVTNAQQLEHDGPWFLIGVTAPLDL 441
P L PP SF V+I + +SIVA VTNAQQL H PW L GVTAPLDL
Sbjct: 627 PLLHPPSYWSQSTSCCSDSATSFXVLIQLRVSIVATVTNAQQLAHPEPWVLTGVTAPLDL 448
Query: 440 QSTLVGAST 414
QS L G ++
Sbjct: 447 QSQLGGGAS 421
>gb|BM442197.2|BM442197 EBan01_SQ002_I02_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ002_I02 5', mRNA sequence
Length = 560
Score = 158 bits (339), Expect(2) = 1e-054
Identities = 56/80 (70%), Positives = 69/80 (86%)
Frame = +1 / +2
Query: 823 IEMGGSLQFYSGGVFSGQCGTRMNHAITVVGYGADSSSGLKYWLVKNSWGQSWGERGYLR 1002
IE+GG +QFY GV+SG CGT + HA+TVVGYG D+++G+KYWLVKNSWGQ+WGE GY+R
Sbjct: 260 IEVGGGMQFYRSGVYSGPCGTALAHAVTVVGYGVDAATGVKYWLVKNSWGQTWGESGYIR 439
Query: 1003 MRRDVGRGGLCGIALDLAYP 1062
MRRD+G GLCGIALD+ YP
Sbjct: 440 MRRDIGGPGLCGIALDVVYP 499
Score = 79.0 bits (166), Expect(2) = 1e-054
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +1 / +2
Query: 562 SLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
+LSEQ+L+DCD YDGGCN G F Y W+++NGG+TT A YP
Sbjct: 2 ALSEQQLVDCDQYDGGCNKGSFHRAYNWIVENGGITTAAEYP 127
>emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine proteinase
Length = 5593
Score = 74.8 bits (157), Expect(6) = 2e-050
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +1 / +2
Query: 928 SSSGLKYWLVKNSWGQSWGERGYLRMRRDVGRGGLCGIALDLAYPV 1065
+S G KYW++KNSWG SWGE GY+R+RR V G+CG+A +YPV
Sbjct: 4769 ASDGTKYWIMKNSWGGSWGEGGYVRIRRGVRGEGVCGLAQLASYPV 4906
Score = 68.0 bits (142), Expect(6) = 2e-050
Identities = 31/78 (39%), Positives = 44/78 (56%)
Frame = +1 / +3
Query: 145 MMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEE 324
M+ R W A + R+Y EE+ RR +V+R N + I++ N A + T+ L N+FADLT+E
Sbjct: 3501 MVSRHEKWMAEHGRTYANEEEKARRLEVFRANAKLIDSFNSAEDSTHRLATNRFADLTDE 3680
Query: 325 EFLDLYTMKGMPVRRDAG 378
EF T P AG
Sbjct: 3681 EFRAARTGLRRPPAAAAG 3734
Score = 65.7 bits (137), Expect(6) = 2e-050
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = +1 / +2
Query: 481 PSCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPY 600
P CWAF A +E +TKI TG+LVSLSEQ+L+DCD Y
Sbjct: 4319 PYAGCCWAFSAVAAVEGLTKIRTGRLVSLSEQQLVDCDVY 4438
Score = 38.6 bits (78), Expect(6) = 2e-050
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1 / +2
Query: 601 DGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
D GC G N + ++I GGLTTE++YP
Sbjct: 4445 DEGCAGGLMDNAFEYMINRGGLTTESSYP 4531
Score = 36.3 bits (73), Expect(6) = 2e-050
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1 / +2
Query: 853 SGGVFSGQCGTRMNHAITVVGYGADS 930
SG + CGT +NHAIT GYG S
Sbjct: 4697 SGVLGGSGCGTELNHAITAAGYGTAS 4774
Score = 29.9 bits (59), Expect(6) = 2e-050
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR+ GAVT +K+QG
Sbjct: 3801 DWRAMGAVTGVKDQG 3845
>emb|Z97023.1|HVZ97023 Hordeum vulgare mRNA encoding cysteine endopeptidase EP-A
Length = 1299
Score = 68.0 bits (142), Expect(7) = 2e-047
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +1 / +1
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
C SCWAF T +E I KI TGKLVSLSEQEL+DCD
Sbjct: 499 CGSCWAFSTIVAVEGINKIRTGKLVSLSEQELMDCD 606
Score = 61.1 bits (127), Expect(7) = 2e-047
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +1 / +1
Query: 937 GLKYWLVKNSWGQSWGERGYLRMRRDVGR 1023
G KYW+VKNSWG+ WGE+GY+RM+R V +
Sbjct: 952 GTKYWIVKNSWGEDWGEKGYIRMQRGVSQ 1038
Score = 49.6 bits (102), Expect(7) = 2e-047
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +1 / +1
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGA 924
G QFYS GVF+G+C T ++H + VGYGA
Sbjct: 850 GQDFQFYSEGVFTGECSTDLDHGVAAVGYGA 942
Score = 35.4 bits (71), Expect(7) = 2e-047
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1 / +1
Query: 649 IQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
IQ G+TTE+NYP A TI Y +PA +
Sbjct: 661 IQKNGITTESNYPYQGEQGSCDQAKENAQAVTIDGYEDVPAND 789
Score = 33.1 bits (66), Expect(7) = 2e-047
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAVT IK+QG
Sbjct: 451 DWRQKGAVTAIKDQG 495
Score = 25.4 bits (49), Expect(7) = 2e-047
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1 / +1
Query: 1027 GLCGIALDLAYP 1062
GLCGIA+ +YP
Sbjct: 1045 GLCGIAMQASYP 1080
Score = 25.4 bits (49), Expect(7) = 2e-047
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1 / +1
Query: 274 NLTYTLGENQFADLTEEEFLDLY 342
++ + L N+FAD+T +EF Y
Sbjct: 283 DMPFRLALNKFADMTTDEFRRTY 351
>emb|A98645.1| Sequence 1 from Patent WO9910500
Length = 1286
Score = 95.9 bits (203), Expect(4) = 2e-046
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = +1 / +1
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADSSSGLKYWLVKNSWGQSWGERGYLRMRR 1011
G + QFYSGG++ G C +NHA+T+VGY G KYW+ KNSW WGE+GY+ + +
Sbjct: 859 GSAFQFYSGGIYRGPCSANVNHAVTIVGYCEGPGEGNKYWIAKNSWSNDWGEQGYVYLAK 1038
Query: 1012 DV 1017
DV
Sbjct: 1039 DV 1044
Score = 87.2 bits (184), Expect(4) = 2e-046
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = +1 / +1
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGG 663
+C SCWAF A IE + KI TG+LVSLSEQ L+DCD GC G+ + +V GG
Sbjct: 502 TCGSCWAFAAVAAIEGMNKIRTGELVSLSEQVLVDCDTVSTGCGGGHSDSAMAFVAARGG 681
Query: 664 LTTEANYP 687
+T+E YP
Sbjct: 682 ITSEERYP 705
Score = 37.7 bits (76), Expect(4) = 2e-046
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1 / +1
Query: 151 DRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNR 267
+RF W Y++ Y +E + RFQV++ N I +R
Sbjct: 139 ERFSKWMIKYSKHYSCKQEEEMRFQVFKNNTNSIGQLDR 255
Score = 31.8 bits (63), Expect(4) = 2e-046
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQG 480
DWRS GAVT +K+QG
Sbjct: 457 DWRSSGAVTGVKHQG 501
>gb|BG300443.1|BG300443 HVSMEb0017B09f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017B09f, mRNA sequence
Length = 869
Score = 101 bits (215), Expect(3) = 8e-046
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +1
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 49 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 228
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 229 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 339
Score = 65.7 bits (137), Expect(3) = 8e-046
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQ +C SCWAF + AT+ES I+TG
Sbjct: 481 DWRAKGVVTPAKNQWATCYSCWAFTSVATMESAQAISTG 597
Score = 62.0 bits (129), Expect(3) = 8e-046
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +1 / +1
Query: 544 TTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
T G L+EQ+L+DC GC G+ + ++WVI NGG+TTEA YP
Sbjct: 592 TGGSPPVLAEQQLVDCSTLHHGCGRGWMDHAFQWVIMNGGITTEAAYP 735
>gb|U19384.1|HVU19384 Hordeum vulgare cysteine proteinase EPB2 gene, complete cds
Length = 2714
Score = 68.4 bits (143), Expect(7) = 8e-046
Identities = 30/59 (50%), Positives = 35/59 (59%)
Frame = +1 / +2
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGG 663
C SCWAF T ++E I I TG LVSLSEQELIDCD D G ++ I+N G
Sbjct: 1307 CGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNG 1483
Score = 58.3 bits (121), Expect(7) = 8e-046
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +1 / +2
Query: 928 SSSGLKYWLVKNSWGQSWGERGYLRMRRDVGRGG 1029
+ G YW VKNSWG SWGE+GY+R+ +D G G
Sbjct: 1763 AEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASG 1864
Score = 51.5 bits (106), Expect(7) = 8e-046
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1 / +2
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G + FYS GVF+G+CGT ++H + VVGYG
Sbjct: 1670 GKAFMFYSEGVFTGECGTELDHGVAVVGYG 1759
Score = 39.1 bits (79), Expect(7) = 8e-046
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1 / +2
Query: 205 ERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEEEF 330
E+ RRF ++ N I + N+ G+ Y L N+F D+ + EF
Sbjct: 1025 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEF 1150
Score = 32.2 bits (64), Expect(7) = 8e-046
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAVT +K+QG
Sbjct: 1259 DWRQKGAVTGVKDQG 1303
Score = 30.9 bits (61), Expect(7) = 8e-046
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 1024 GGLCGIALDLAYPV 1065
GGLCGIA++ +YPV
Sbjct: 1862 GGLCGIAMEASYPV 1903
Score = 30.4 bits (60), Expect(7) = 8e-046
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3 / +1
Query: 642 VGDPERRAHHRGQLPVP 692
V +RRA+HRG+LPVP
Sbjct: 1465 VHQEQRRANHRGRLPVP 1515
>gb|U19359.1|HVU19359 Hordeum vulgare cysteine proteinase EPB1 gene, complete cds
Length = 2880
Score = 68.4 bits (143), Expect(7) = 2e-045
Identities = 30/59 (50%), Positives = 35/59 (59%)
Frame = +1 / +2
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGG 663
C SCWAF T ++E I I TG LVSLSEQELIDCD D G ++ I+N G
Sbjct: 1502 CGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNG 1678
Score = 58.3 bits (121), Expect(7) = 2e-045
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +1 / +2
Query: 928 SSSGLKYWLVKNSWGQSWGERGYLRMRRDVGRGG 1029
+ G YW VKNSWG SWGE+GY+R+ +D G G
Sbjct: 1958 AEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASG 2059
Score = 50.6 bits (104), Expect(7) = 2e-045
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1 / +2
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G + FYS GVF+G CGT ++H + VVGYG
Sbjct: 1865 GKAFMFYSEGVFTGDCGTELDHGVAVVGYG 1954
Score = 39.1 bits (79), Expect(7) = 2e-045
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1 / +2
Query: 205 ERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTEEEF 330
E+ RRF ++ N I + N+ G+ Y L N+F D+ + EF
Sbjct: 1220 EKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEF 1345
Score = 32.2 bits (64), Expect(7) = 2e-045
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAVT +K+QG
Sbjct: 1454 DWRQKGAVTGVKDQG 1498
Score = 30.9 bits (61), Expect(7) = 2e-045
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 1024 GGLCGIALDLAYPV 1065
GGLCGIA++ +YPV
Sbjct: 2057 GGLCGIAMEASYPV 2098
Score = 30.4 bits (60), Expect(7) = 2e-045
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3 / +1
Query: 642 VGDPERRAHHRGQLPVP 692
V +RRA+HRG+LPVP
Sbjct: 1660 VHQEQRRANHRGRLPVP 1710
>gb|BG310420.1|BG310420 HVSMEc0018J22f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0018J22f, mRNA sequence
Length = 837
Score = 99.1 bits (210), Expect(3) = 5e-045
Identities = 37/68 (54%), Positives = 49/68 (72%)
Frame = +1 / +2
Query: 142 LMMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTE 321
LM+ RF W A + RSYPT EE+ RRF+VYR N+E IEA NR ++Y+LGE F DLT
Sbjct: 68 LMLGRFHGWMAAHGRSYPTVEEKLRRFEVYRSNVEFIEAANRDSRMSYSLGETPFTDLTH 247
Query: 322 EEFLDLYT 345
+EF+ +Y+
Sbjct: 248 DEFMAMYS 271
Score = 69.3 bits (145), Expect(3) = 5e-045
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 413 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 529
Score = 57.9 bits (120), Expect(3) = 5e-045
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +1 / +2
Query: 544 TTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
T G LSEQ+L+DC GC G+ + ++WVI N G+TT A YP
Sbjct: 524 TGGSPPVLSEQQLVDCSTLHHGCGRGWMDDAFKWVIMNRGITTGAGYP 667
>gb|AV926718.1|AV926718 AV926718 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23i06 5', mRNA sequence
Length = 644
Score = 98.2 bits (208), Expect(3) = 1e-044
Identities = 37/68 (54%), Positives = 49/68 (72%)
Frame = +1 / +2
Query: 142 LMMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTE 321
LM+ RF W A + RSYPT EE+ RRF+VYR N+E IEA NR ++Y+LGE F DLT
Sbjct: 56 LMLGRFHGWMAAHGRSYPTVEEKLRRFEVYRSNMEFIEAANRDSRMSYSLGETPFTDLTH 235
Query: 322 EEFLDLYT 345
+EF+ +Y+
Sbjct: 236 DEFMAMYS 259
Score = 69.3 bits (145), Expect(3) = 1e-044
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 401 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 517
Score = 56.5 bits (117), Expect(3) = 1e-044
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +1 / +2
Query: 544 TTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGLTTE 675
T G LSEQ+L+DC GC G+ + ++WVI NGG+TTE
Sbjct: 512 TGGSPPVLSEQQLVDCSTLHHGCGRGWMDDAFKWVIMNGGITTE 643
>gb|BE455678.3|BE455678 HVSMEg0018N22f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0018N22f, mRNA sequence
Length = 582
Score = 122 bits (261), Expect(2) = 2e-044
Identities = 52/79 (65%), Positives = 60/79 (75%)
Frame = +1 / +3
Query: 142 LMMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTE 321
LMMDRF WQAT+NRSY +AEER RRFQVY N+E+I+ATNR G+LTY LGEN+FADLT+
Sbjct: 111 LMMDRFRQWQATHNRSYLSAEERLRRFQVYSDNVEYIDATNRRGDLTYELGENEFADLTQ 290
Query: 322 EEFLDLYTMKGMPVRRDAG 378
EEFL Y DAG
Sbjct: 291 EEFLARYASSYDGTGDDAG 347
Score = 77.6 bits (163), Expect(2) = 2e-044
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTGKLVSLSEQ 576
DWRSKGAVTP+K QG C+SCWAFVT ATIE++T G L +EQ
Sbjct: 438 DWRSKGAVTPVKTQGSXCASCWAFVTVATIETLTGSXRGSLWPPAEQ 578
Score = 74.4 bits (156), Expect(2) = 3e-025
Identities = 35/51 (68%), Positives = 36/51 (70%)
Frame = -3 / -3
Query: 308 ANWFSPSVYVRLPARLVASMCSMLRRYTWNRRCLSSAVGYDRLYVACQLRN 156
AN FSPS VR P RLVASM S L YTW RR LSSA+ YDRL VAC RN
Sbjct: 277 ANSFSPSS*VRSPRRLVASMYSTLSLYTWKRRSLSSALRYDRLCVACHWRN 125
Score = 64.3 bits (134), Expect(2) = 3e-025
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = -3 / -3
Query: 536 VMLSIVAAVTNAQQLEHDGPWFLIGVTAPLDLQSTLVGAST 414
V +SIVA VTNAQQL H PW L GVTAPLDLQS L G ++
Sbjct: 538 VRVSIVATVTNAQQLAHXEPWVLTGVTAPLDLQSQLGGGAS 416
>gb|BF628998.2|BF628998 HVSMEb0009I02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009I02f, mRNA sequence
Length = 796
Score = 101 bits (215), Expect(4) = 2e-041
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +1
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 49 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 228
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 229 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 339
Score = 68.9 bits (144), Expect(4) = 2e-041
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 481 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAHAISTG 597
Score = 36.3 bits (73), Expect(4) = 2e-041
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1 / +2
Query: 619 GYFVNGYRWVIQNGGLTTEANYP 687
G+ + ++WVI N G+TTEA YP
Sbjct: 668 GWMDDAFKWVIMNRGITTEAAYP 736
Score = 26.3 bits (51), Expect(4) = 2e-041
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1 / +1
Query: 544 TTGKLVSLSEQELIDCDPYDGGC 612
T G LSEQ+L+DC GC
Sbjct: 592 TGGSPPVLSEQQLVDCITLHHGC 660
>gb|CA018921.1|CA018921 HV10A20r HV Hordeum vulgare subsp. vulgare cDNA clone HV10A20
5-PRIME, mRNA sequence
Length = 577
Score = 64.8 bits (135), Expect(5) = 3e-040
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +1 / +1
Query: 484 SCSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SC +CW+F +E I KITTG L+SLSEQELIDCD
Sbjct: 52 SCGACWSFSATGAMEGINKITTGSLLSLSEQELIDCD 162
Score = 50.6 bits (104), Expect(5) = 3e-040
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1 / +1
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRM 1005
G S G YW+VKNSWG+ WG +GY+ M
Sbjct: 490 GYGSEGGKDYWIVKNSWGERWGMKGYMHM 576
Score = 48.7 bits (100), Expect(5) = 3e-040
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1 / +1
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GC G Y++VI+NGG+ TE +YP H TI Y ++P+ +
Sbjct: 169 YNTGCGGGLMTYAYKFVIKNGGIDTEDDYPFREADGTCNKNKLKKHVVTIDGYKEVPSSK 348
Score = 45.1 bits (92), Expect(5) = 3e-040
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1 / +1
Query: 838 SLQFYSGGVFSGQCGTRMNHAITVVGYGAD 927
+ Q YS G+F G C T ++HA+ +VGYG++
Sbjct: 415 AFQLYSQGIFDGPCPTSLDHAVLIVGYGSE 504
Score = 30.4 bits (60), Expect(5) = 3e-040
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQG 480
DWR GAVT +K+QG
Sbjct: 7 DWRQSGAVTKVKDQG 51
>gb|BI952590.1|BI952590 HVSMEm0007B06f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0007B06f, mRNA sequence
Length = 869
Score = 104 bits (221), Expect(2) = 4e-040
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = +1 / +1
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADSSSGLKYWLVKNSWGQSWGERGYLRMRR 1011
G + Q Y GV++G CGTR+NH +TVVGYG D + YW+VKNSWG+ WG+ GYLRM++
Sbjct: 310 GANFQHYRNGVYNGPCGTRLNHGVTVVGYGKDEVTRESYWIVKNSWGEKWGDNGYLRMKK 489
Query: 1012 DV 1017
+
Sbjct: 490 GI 495
Score = 81.7 bits (172), Expect(2) = 4e-040
Identities = 32/74 (43%), Positives = 42/74 (56%)
Frame = +1 / +1
Query: 535 TKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXX 714
T+ TGKL SLSEQEL+DCD D GCN G +W+ NGG+T++ +YP
Sbjct: 7 TRCQTGKLASLSEQELVDCDKLDHGCNGGVSYRALQWITSNGGITSQDDYPYTAEDDTCD 186
Query: 715 XXXXXXHAATISDY 756
HAA+IS +
Sbjct: 187 TTKLSHHAASISGF 228
>gb|BG415364.1|BG415364 HVSMEk0006D05f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0006D05f, mRNA sequence
Length = 660
Score = 62.9 bits (131), Expect(6) = 3e-039
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +1 / +2
Query: 937 GLKYWLVKNSWGQSWGERGYLRMRRDV 1017
G KYW+VKNSWG WGE+GY+RM+RDV
Sbjct: 503 GTKYWIVKNSWGPEWGEKGYIRMKRDV 583
Score = 57.0 bits (118), Expect(6) = 3e-039
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +1 / +2
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
C SCWAF T A +E I I + L SLSEQ+L+DCD
Sbjct: 50 CGSCWAFSTIAAVEGINAIRSKNLTSLSEQQLVDCD 157
Score = 51.5 bits (106), Expect(6) = 3e-039
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1 / +2
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G QFYS GVF+G+CGT ++H + VGYG
Sbjct: 401 GSHFQFYSEGVFAGKCGTELDHGVAAVGYG 490
Score = 30.9 bits (61), Expect(6) = 3e-039
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQG 480
DWR +GAVT +K+QG
Sbjct: 2 DWRQEGAVTAVKDQG 46
Score = 28.6 bits (56), Expect(6) = 3e-039
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +1 / +2
Query: 601 DGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
+ GCN G ++++ ++GG+ E YP
Sbjct: 167 NAGCNGGLMDYAFQYIAKHGGVAAEDAYP 253
Score = 28.1 bits (55), Expect(6) = 3e-039
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1 / +2
Query: 1027 GLCGIALDLAYPV 1065
GLCGIA++ +YPV
Sbjct: 596 GLCGIAMEASYPV 634
>gb|CA018792.1|CA018792 HV09K16r HV Hordeum vulgare subsp. vulgare cDNA clone HV09K16
5-PRIME, mRNA sequence
Length = 631
Score = 68.4 bits (143), Expect(5) = 2e-038
Identities = 30/59 (50%), Positives = 35/59 (59%)
Frame = +1 / +3
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGG 663
C SCWAF T ++E I I TG LVSLSEQELIDCD D G ++ I+N G
Sbjct: 36 CGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNG 212
Score = 59.7 bits (124), Expect(5) = 2e-038
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +1 / +3
Query: 928 SSSGLKYWLVKNSWGQSWGERGYLRMRRDVGRGG 1029
S G YW VKNSWG SWGE+GY+R+ +D G G
Sbjct: 492 SEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASG 593
Score = 51.5 bits (106), Expect(5) = 2e-038
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G + FYS GVF+G+CGT ++H + VVGYG
Sbjct: 399 GKAFMFYSEGVFTGECGTELDHGVAVVGYG 488
Score = 30.4 bits (60), Expect(5) = 2e-038
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3 / +2
Query: 642 VGDPERRAHHRGQLPVP 692
V +RRA+HRG+LPVP
Sbjct: 194 VHQEQRRANHRGRLPVP 244
Score = 29.0 bits (57), Expect(5) = 2e-038
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +1 / +3
Query: 1024 GGLCGIALDLAYP 1062
GGLCGIA++ +YP
Sbjct: 591 GGLCGIAMEASYP 629
>gb|AV923200.1|AV923200 AV923200 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd12d08 5', mRNA sequence
Length = 677
Score = 101 bits (215), Expect(3) = 9e-038
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +1
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 49 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 228
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 229 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 339
Score = 69.3 bits (145), Expect(3) = 9e-038
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 481 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 597
Score = 30.4 bits (60), Expect(3) = 9e-038
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1 / +1
Query: 544 TTGKLVSLSEQELIDCDPYDGGCNLGY 624
T G LSEQ+L+DC GC G+
Sbjct: 592 TGGSPPVLSEQQLVDCSTLHHGCGRGW 672
>gb|BJ472680.1|BJ472680 BJ472680 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal36b13 5', mRNA sequence
Length = 584
Score = 62.9 bits (131), Expect(4) = 2e-037
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +1 / +3
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
C +CW+F +E I KITTG L+SLSEQELIDCD
Sbjct: 36 CGACWSFSATGAMEGINKITTGSLLSLSEQELIDCD 143
Score = 56.1 bits (116), Expect(4) = 2e-037
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +1 / +3
Query: 919 GADSSSGLKYWLVKNSWGQSWGERGYLRMRRDVG 1020
G S G YW+VKNSWG+ WG +GY+ M R+ G
Sbjct: 471 GYGSEGGKDYWIVKNSWGERWGMKGYMHMHRNTG 572
Score = 48.7 bits (100), Expect(4) = 2e-037
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1 / +3
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYPXXXXXXXXXXXXXXXHAATISDYVQLPAGE 777
Y+ GC G Y++VI+NGG+ TE +YP H TI Y ++P+ +
Sbjct: 150 YNTGCGGGLMTYAYKFVIKNGGIDTEDDYPFREADGTCNKNKLKKHVVTIDGYKEVPSSK 329
Score = 45.1 bits (92), Expect(4) = 2e-037
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1 / +3
Query: 838 SLQFYSGGVFSGQCGTRMNHAITVVGYGAD 927
+ Q YS G+F G C T ++HA+ +VGYG++
Sbjct: 396 AFQLYSQGIFDGPCPTSLDHAVLIVGYGSE 485
>gb|AV917445.1|AV917445 AV917445 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18p06 5', mRNA sequence
Length = 663
Score = 101 bits (215), Expect(3) = 6e-037
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +1
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 49 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 228
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 229 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 339
Score = 69.3 bits (145), Expect(3) = 6e-037
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 481 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 597
Score = 27.6 bits (54), Expect(3) = 6e-037
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1 / +1
Query: 544 TTGKLVSLSEQELIDCDPYDGGC 612
T G LSEQ+L+DC GC
Sbjct: 592 TGGSPPVLSEQQLVDCSTLHHGC 660
>gb|AV924415.1|AV924415 AV924415 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14h18 5', mRNA sequence
Length = 663
Score = 101 bits (215), Expect(3) = 6e-037
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +2
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 50 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 229
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 230 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 340
Score = 69.3 bits (145), Expect(3) = 6e-037
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 482 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 598
Score = 27.6 bits (54), Expect(3) = 6e-037
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1 / +2
Query: 544 TTGKLVSLSEQELIDCDPYDGGC 612
T G LSEQ+L+DC GC
Sbjct: 593 TGGSPPVLSEQQLVDCSTLHHGC 661
>gb|AV927028.1|AV927028 AV927028 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26h18 5', mRNA sequence
Length = 667
Score = 101 bits (215), Expect(3) = 6e-037
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +3
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 54 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 233
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 234 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 344
Score = 69.3 bits (145), Expect(3) = 6e-037
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 486 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 602
Score = 27.6 bits (54), Expect(3) = 6e-037
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1 / +3
Query: 544 TTGKLVSLSEQELIDCDPYDGGC 612
T G LSEQ+L+DC GC
Sbjct: 597 TGGSPPVLSEQQLVDCSTLHHGC 665
>gb|CA021721.1|CA021721 HZ40O14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ40O14
5-PRIME, mRNA sequence
Length = 564
Score = 91.8 bits (194), Expect(4) = 5e-036
Identities = 35/60 (58%), Positives = 40/60 (66%)
Frame = +1 / +2
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGL 666
C SCWAF T A IE I +I TGKL SLSEQEL+DCD D GCN G +W+ NGG+
Sbjct: 383 CGSCWAFSTVAVIEGIHQIQTGKLASLSEQELVDCDKLDHGCNGGVSYRALQWITSNGGI 562
Score = 43.2 bits (88), Expect(4) = 5e-036
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +1 / +2
Query: 169 QATYNRSYPTAEERQRRFQVYRRNIEHIEATN 264
+A ++R+Y T EE + R +VY RN+ +IEATN
Sbjct: 8 RAEHSRTYATPEEERHRLRVYARNMRYIEATN 103
Score = 39.1 bits (79), Expect(4) = 5e-036
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1 / +2
Query: 277 LTYTLGENQFADLTEEEFLDLYTMKGMPVRRD 372
LTY LGE + DLT EF +YT + P+ D
Sbjct: 122 LTYELGETAYTDLTSNEFTAMYTSRAPPLSDD 217
Score = 33.6 bits (67), Expect(4) = 5e-036
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQG 480
DWR +GAVT +KNQG
Sbjct: 335 DWRERGAVTAVKNQG 379
>emb|Z97021.1|HVZ97021 Hordeum vulgare gene encoding cysteine endopeptidase EP-A
Length = 2752
Score = 63.8 bits (133), Expect(7) = 6e-036
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = +1 / +1
Query: 493 SCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
SCWAF T +E I KI TGKLVSLSEQEL+DCD
Sbjct: 1699 SCWAFSTIVAVEGINKIRTGKLVSLSEQELMDCD 1800
Score = 61.1 bits (127), Expect(7) = 6e-036
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +1 / +1
Query: 937 GLKYWLVKNSWGQSWGERGYLRMRRDVGR 1023
G KYW+VKNSWG+ WGE+GY+RM+R V +
Sbjct: 2329 GTKYWIVKNSWGEDWGEKGYIRMQRGVSQ 2415
Score = 38.6 bits (78), Expect(7) = 6e-036
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1 / +1
Query: 859 GVFSGQCGTRMNHAITVVGYGA 924
GVF+G+C T ++H + VGYGA
Sbjct: 2254 GVFTGECSTDLDHGVAAVGYGA 2319
Score = 33.1 bits (66), Expect(7) = 6e-036
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAVT IK+QG
Sbjct: 1515 DWRQKGAVTAIKDQG 1559
Score = 29.9 bits (59), Expect(7) = 6e-036
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3 / +3
Query: 651 PERRAHHRGQLPVPGAAVRVQP 716
PE R HHR QLP+ A +++P
Sbjct: 1857 PEERDHHRVQLPISRRAGQLRP 1922
Score = 25.4 bits (49), Expect(7) = 6e-036
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1 / +1
Query: 1027 GLCGIALDLAYP 1062
GLCGIA+ +YP
Sbjct: 2422 GLCGIAMQASYP 2457
Score = 24.4 bits (47), Expect(7) = 6e-036
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1 / +3
Query: 283 YTLGENQFADLTEEEFLDLY 342
+ L N+FAD+T +EF Y
Sbjct: 1356 FRLALNKFADMTTDEFRRTY 1415
>gb|BU994426.1|BU994426 HM07A13r HM Hordeum vulgare subsp. vulgare cDNA clone HM07A13
5-PRIME, mRNA sequence
Length = 527
Score = 149 bits (321), Expect = 2e-035
Identities = 53/82 (64%), Positives = 67/82 (81%)
Frame = +1 / +2
Query: 823 IEMGGSLQFYSGGVFSGQCGTRMNHAITVVGYGADSSSGLKYWLVKNSWGQSWGERGYLR 1002
IE+G +QFY GV+SG CG R+ HA+T+VGYGAD S+G KYW+VKNSWGQ+WGERGY+R
Sbjct: 167 IELGSDMQFYKSGVYSGPCGARLEHAVTIVGYGADESTGDKYWIVKNSWGQTWGERGYIR 346
Query: 1003 MRRDVGRGGLCGIALDLAYPVV 1068
M+R + GLCGI LD+AYP +
Sbjct: 347 MQRKILGPGLCGIMLDVAYPTM 412
>gb|CA013849.1|CA013849 HT09K13r HT Hordeum vulgare subsp. vulgare cDNA clone HT09K13
5-PRIME, mRNA sequence
Length = 632
Score = 68.4 bits (143), Expect(4) = 5e-035
Identities = 30/59 (50%), Positives = 35/59 (59%)
Frame = +1 / +3
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGG 663
C SCWAF T ++E I I TG LVSLSEQELIDCD D G ++ I+N G
Sbjct: 69 CGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNG 245
Score = 59.7 bits (124), Expect(4) = 5e-035
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +1 / +3
Query: 928 SSSGLKYWLVKNSWGQSWGERGYLRMRRDVGRGG 1029
S G YW VKNSWG SWGE+GY+R+ +D G G
Sbjct: 525 SEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASG 626
Score = 51.5 bits (106), Expect(4) = 5e-035
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1 / +3
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G + FYS GVF+G+CGT ++H + VVGYG
Sbjct: 432 GKAFMFYSEGVFTGECGTELDHGVAVVGYG 521
Score = 30.4 bits (60), Expect(4) = 5e-035
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3 / +2
Query: 642 VGDPERRAHHRGQLPVP 692
V +RRA+HRG+LPVP
Sbjct: 227 VHQEQRRANHRGRLPVP 277
>gb|AL500436.1|AL500436 AL500436 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK06K02r 3', mRNA sequence
Length = 606
Score = 98.2 bits (208), Expect(3) = 9e-035
Identities = 37/68 (54%), Positives = 49/68 (72%)
Frame = +1 / -2
Query: 142 LMMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTE 321
LM+ RF W A + RSYPT EE+ RRF+VYR N+E IEA NR ++Y+LGE F DLT
Sbjct: 524 LMLGRFHGWMAAHGRSYPTVEEKLRRFEVYRSNMEFIEAANRDSRMSYSLGETPFTDLTH 345
Query: 322 EEFLDLYT 345
+EF+ +Y+
Sbjct: 344 DEFMAMYS 321
Score = 69.3 bits (145), Expect(3) = 9e-035
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / -2
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 179 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 63
Score = 23.1 bits (44), Expect(3) = 9e-035
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1 / -2
Query: 544 TTGKLVSLSEQELIDC 591
T G LSEQ+L+DC
Sbjct: 68 TGGSPPVLSEQQLVDC 21
>gb|AV925578.1|AV925578 AV925578 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd24p13 5', mRNA sequence
Length = 631
Score = 101 bits (215), Expect(2) = 1e-034
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +2
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 50 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 229
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 230 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 340
Score = 69.3 bits (145), Expect(2) = 1e-034
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 482 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 598
>gb|AV926595.1|AV926595 AV926595 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19p18 5', mRNA sequence
Length = 630
Score = 101 bits (215), Expect(2) = 1e-034
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +2
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 59 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 238
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 239 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 349
Score = 69.3 bits (145), Expect(2) = 1e-034
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 491 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 607
>gb|AV925239.1|AV925239 AV925239 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22f18 5', mRNA sequence
Length = 634
Score = 101 bits (215), Expect(2) = 1e-034
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +1
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 58 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 237
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 238 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 348
Score = 69.3 bits (145), Expect(2) = 1e-034
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 490 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 606
>gb|AV925573.1|AV925573 AV925573 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd24p02 5', mRNA sequence
Length = 632
Score = 101 bits (215), Expect(2) = 1e-034
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +2
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 50 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 229
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 230 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 340
Score = 69.3 bits (145), Expect(2) = 1e-034
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 482 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 598
>gb|AV925582.1|AV925582 AV925582 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd24p17 5', mRNA sequence
Length = 634
Score = 101 bits (215), Expect(2) = 1e-034
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +2
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 50 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 229
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 230 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 340
Score = 69.3 bits (145), Expect(2) = 1e-034
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 482 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 598
>gb|AV927005.1|AV927005 AV927005 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26g10 5', mRNA sequence
Length = 634
Score = 101 bits (215), Expect(2) = 1e-034
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +2
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 59 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 238
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 239 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 349
Score = 69.3 bits (145), Expect(2) = 1e-034
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 491 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 607
>gb|AV926964.1|AV926964 AV926964 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26d24 5', mRNA sequence
Length = 646
Score = 101 bits (215), Expect(2) = 1e-034
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +2
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 59 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 238
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 239 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 349
Score = 69.3 bits (145), Expect(2) = 1e-034
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 491 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 607
>gb|AV925173.1|AV925173 AV925173 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22b05 5', mRNA sequence
Length = 677
Score = 101 bits (215), Expect(2) = 1e-034
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +1
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 64 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 243
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 244 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 354
Score = 69.3 bits (145), Expect(2) = 1e-034
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 496 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 612
>gb|BF628689.3|BF628689 HVSMEb0007C07f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007C07f, mRNA sequence
Length = 697
Score = 97.3 bits (206), Expect(4) = 1e-034
Identities = 37/66 (56%), Positives = 46/66 (69%)
Frame = +1 / +3
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGL 666
C SCWAF T ATIE I KI G LVSLSEQ+LIDCD D GC G ++W+ +NGG+
Sbjct: 3 CGSCWAFPTVATIEGIHKIKRGTLVSLSEQQLIDCDYLDNGCKGGLVTRAFQWIKKNGGI 182
Query: 667 TTEANY 684
T+ ++Y
Sbjct: 183 TSTSSY 200
Score = 54.2 bits (112), Expect(4) = 1e-034
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +1 / +3
Query: 931 SSGLKYWLVKNSWGQSWGERGYLRMRR 1011
+ G KYW+VKNSWG +WG++GY+ M+R
Sbjct: 480 APGAKYWIVKNSWGTTWGDKGYILMKR 560
Score = 34.1 bits (68), Expect(4) = 1e-034
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1 / +3
Query: 883 TRMNHAITVVGYGADSSSG 939
T++NHA+TVVGYG +G
Sbjct: 402 TKLNHAVTVVGYGQQQQNG 458
Score = 23.5 bits (45), Expect(4) = 1e-034
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1 / +3
Query: 850 YSGGVFSGQCGT 885
Y GG+++G C T
Sbjct: 366 YKGGIYNGPCST 401
>gb|AV927641.1|AV927641 AV927641 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2p22 3', mRNA sequence
Length = 707
Score = 61.1 bits (127), Expect(5) = 1e-034
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +1 / -1
Query: 475 QGPSCSSCWAFVTAATIESITKITTGKLVSLSEQELIDC 591
Q +C CWAF AAT+ES+ KI G+LV LS QEL+DC
Sbjct: 677 QQGACGCCWAFAAAATVESLNKINGGELVDLSVQELVDC 561
Score = 50.6 bits (104), Expect(5) = 1e-034
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +1 / -1
Query: 928 SSSGLKYWLVKNSWGQSWGERGYLRMRR 1011
+ +G +YW+ KNSWGQ+WG+ G+ MRR
Sbjct: 212 TGAGEEYWIAKNSWGQTWGQNGFFFMRR 129
Score = 46.4 bits (95), Expect(5) = 1e-034
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +1 / -1
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G LQ Y GV+ G C T NH +TVVGYG
Sbjct: 305 GSVLQNYKSGVYKGPCTTSQNHVVTVVGYG 216
Score = 35.4 bits (71), Expect(5) = 1e-034
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1 / -1
Query: 1018 GRGGLCGIALDLAYPVV*FIYYHRM 1092
G GLCG+A+ AYPV+* + YH M
Sbjct: 119 GPRGLCGMAMYGAYPVM*LVLYHGM 45
Score = 33.1 bits (66), Expect(5) = 1e-034
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1 / -1
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
+ C G+ + +W+ GGL TEA YP
Sbjct: 548 FSSPCGYGWPKSALQWIKSKGGLLTEAEYP 459
>gb|AV931616.1|AV931616 AV931616 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd23i06 3', mRNA sequence
Length = 740
Score = 63.8 bits (133), Expect(4) = 6e-034
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1 / -2
Query: 937 GLKYWLVKNSWGQSWGERGYLRMRRDVGRGGLCGIALDLAYPVV*FIYYHRM 1092
G KYW+ KNSW WG++G++ + RD GLCG+A YP++*+ +H +
Sbjct: 208 GTKYWIGKNSWTAKWGDKGFIYLLRDSPPLGLCGLAKLPVYPII*WHLHHHL 53
Score = 63.8 bits (133), Expect(4) = 6e-034
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +1 / -2
Query: 544 TTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
T G LSEQ+L+DC GC G+ + ++WVI NGG+TTEA YP
Sbjct: 634 TGGSPPVLSEQQLVDCSTLHHGCGRGWMDDAFKWVIMNGGITTEAAYP 491
Score = 46.9 bits (96), Expect(4) = 6e-034
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +1 / -2
Query: 469 KNQGPSCSSCWAFVTAATIESITKITTG 552
KNQG +C SCWAF + AT+ES I+TG
Sbjct: 712 KNQGATCFSCWAFTSVATMESAQAISTG 629
Score = 32.7 bits (65), Expect(4) = 6e-034
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1 / -2
Query: 853 SGGVFSGQCGTRMNHAITVVGYG 921
SG G C T NHA+ +VGYG
Sbjct: 289 SGVYIKGACKTAQNHAMALVGYG 221
>gb|BG343507.1|BG343507 HVSMEg0005P07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005P07f, mRNA sequence
Length = 938
Score = 61.1 bits (127), Expect(6) = 2e-032
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1 / +3
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDC 591
C SCWAF T A +E I I TG L +LSEQELIDC
Sbjct: 225 CGSCWAFSTVAAVEGINAIVTGNLTALSEQELIDC 329
Score = 50.6 bits (104), Expect(6) = 2e-032
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +1 / +1
Query: 844 QFYSGGVFSGQCGTRMNHAITVVGYGAD 927
QFYSGG F G CG +++H + VGYG+D
Sbjct: 535 QFYSGGSFDGSCGAQLDHGVAAVGYGSD 618
Score = 35.0 bits (70), Expect(6) = 2e-032
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAVT +KNQG
Sbjct: 177 DWRKKGAVTEVKNQG 221
Score = 30.9 bits (61), Expect(6) = 2e-032
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1 / +3
Query: 280 TYTLGENQFADLTEEEFLDLY 342
+Y LG N+FADLT +EF Y
Sbjct: 24 SYWLGLNEFADLTHDEFKAAY 86
Score = 30.4 bits (60), Expect(6) = 2e-032
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1 / +3
Query: 601 DGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
+ GCN G + ++ +GGL TE YP
Sbjct: 342 NSGCNGGLMDYAFSYIASSGGLHTEEAYP 428
Score = 29.9 bits (59), Expect(6) = 2e-032
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1 / +2
Query: 970 GQSWGERGYLRMRRDVGRGGLCGIALDL 1053
G GE+GY+ M+R GLC + L
Sbjct: 659 GAQXGEKGYIXMKRGTATRGLCASQMPL 742
>gb|BF618995.2|BF618995 HVSMEc0008F14f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0008F14f, mRNA sequence
Length = 826
Score = 101 bits (215), Expect(2) = 3e-032
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +1
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 37 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 216
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 217 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 327
Score = 61.6 bits (128), Expect(2) = 3e-032
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG +TP KNQG +C SCWAF + AT + I TG
Sbjct: 469 DWRAKGVLTPAKNQGATCCSCWAFTSVATNGNAQAINTG 585
>gb|AV926725.1|AV926725 AV926725 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23i18 5', mRNA sequence
Length = 464
Score = 98.2 bits (208), Expect(2) = 4e-032
Identities = 37/68 (54%), Positives = 49/68 (72%)
Frame = +1 / +2
Query: 142 LMMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNRAGNLTYTLGENQFADLTE 321
LM+ RF W A + RSYPT EE+ RRF+VYR N+E IEA NR ++Y+LGE F DLT
Sbjct: 20 LMLGRFHGWMAAHGRSYPTVEEKLRRFEVYRSNMEFIEAANRDSRMSYSLGETPFTDLTH 199
Query: 322 EEFLDLYT 345
+EF+ +Y+
Sbjct: 200 DEFMAMYS 223
Score = 63.4 bits (132), Expect(2) = 4e-032
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIES 531
DWR+KG VTP KNQG +C SCWAF + AT+ES
Sbjct: 365 DWRAKGVVTPAKNQGATCFSCWAFTSVATMES 460
>gb|CK122888.1|CK122888 BES1824101b11 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B111 5-PRIME, mRNA sequence
Length = 785
Score = 64.3 bits (134), Expect(5) = 9e-032
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = +1 / +1
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
C SCWAF +T+ESI +I TG++V+LSEQEL++CD
Sbjct: 256 CGSCWAFSAVSTVESINQIVTGEMVTLSEQELVECD 363
Score = 49.2 bits (101), Expect(5) = 9e-032
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1 / +1
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYGADS 930
G Q Y GVFSG+CGT++ H + VGYG ++
Sbjct: 613 GREFQLYHSGVFSGRCGTQLXHGVVAVGYGTEN 711
Score = 38.2 bits (77), Expect(5) = 9e-032
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1 / +1
Query: 586 DCDPYDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
D + GCN G + + ++I+NGG+ TE +YP
Sbjct: 361 DINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYP 462
Score = 36.3 bits (73), Expect(5) = 9e-032
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3 / +3
Query: 414 RGRSDQRRLEVQGRRHADQEPGPV 485
RG + RRLE +GRR QEPGPV
Sbjct: 186 RGAAGGRRLEGEGRRRPRQEPGPV 257
Score = 29.5 bits (58), Expect(5) = 9e-032
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1 / +1
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLY 342
R ++ A AG + L N+FADLT +EF Y
Sbjct: 4 RFVDAHNARAAAGEEGFRLAMNRFADLTNDEFRAAY 111
>gb|AV924784.1|AV924784 AV924784 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16p06 5', mRNA sequence
Length = 571
Score = 101 bits (215), Expect(2) = 1e-031
Identities = 43/97 (44%), Positives = 58/97 (59%)
Frame = +1 / +3
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 51 LLVAAAFFIPSTASSASHTLDHGLXGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 230
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 231 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 341
Score = 58.8 bits (122), Expect(2) = 1e-031
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAAT 522
DWR+KG VTP KNQG +C SCWAF + AT
Sbjct: 483 DWRAKGVVTPAKNQGATCFSCWAFTSVAT 569
>gb|AV926982.1|AV926982 AV926982 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26e22 5', mRNA sequence
Length = 578
Score = 101 bits (215), Expect(2) = 1e-031
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +2
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 59 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 238
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 239 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 349
Score = 58.8 bits (122), Expect(2) = 1e-031
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAAT 522
DWR+KG VTP KNQG +C SCWAF + AT
Sbjct: 491 DWRAKGVVTPAKNQGATCFSCWAFTSVAT 577
>gb|BI950636.1|BI950636 HVSMEl0021N14f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0021N14f, mRNA sequence
Length = 882
Score = 64.3 bits (134), Expect(4) = 2e-031
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = +1 / +3
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
C SCWAF +T+ESI +I TG++V+LSEQEL++CD
Sbjct: 66 CGSCWAFSAVSTVESINQIVTGEMVTLSEQELVECD 173
Score = 60.2 bits (125), Expect(4) = 2e-031
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +1 / +3
Query: 907 VVGYGADSSSGLKYWLVKNSWGQSWGERGYLRMRRDV 1017
VV G + +G YW+V+NSWG +WGE GYLRM R++
Sbjct: 492 VVAVGYGTENGKDYWIVRNSWGPNWGEAGYLRMERNI 602
Score = 38.2 bits (77), Expect(4) = 2e-031
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1 / +3
Query: 586 DCDPYDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
D + GCN G + + ++I+NGG+ TE +YP
Sbjct: 171 DINGQSSGCNGGLMDDAFEFIIKNGGIDTEDDYP 272
Score = 36.3 bits (73), Expect(4) = 2e-031
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR KGAV P+KNQG
Sbjct: 18 DWREKGAVAPVKNQG 62
>gb|AV924189.1|AV924189 AV924189 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd11k23 5', mRNA sequence
Length = 585
Score = 69.3 bits (145), Expect(3) = 5e-031
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIESITKITTG 552
DWR+KG VTP KNQG +C SCWAF + AT+ES I+TG
Sbjct: 275 DWRAKGVVTPAKNQGATCFSCWAFTSVATMESAQAISTG 391
Score = 63.8 bits (133), Expect(3) = 5e-031
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +1 / +2
Query: 544 TTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
T G LSEQ+L+DC GC G+ + ++WVI NGG+TTEA YP
Sbjct: 386 TGGSPPVLSEQQLVDCSTLHHGCGRGWMDDAFKWVIMNGGITTEAAYP 529
Score = 44.6 bits (91), Expect(3) = 5e-031
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1 / +2
Query: 250 IEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 38 IEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 133
>gb|BF630395.3|BF630395 HVSMEb0009B06f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009B06f, mRNA sequence
Length = 720
Score = 63.8 bits (133), Expect(3) = 1e-030
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +1 / +3
Query: 544 TTGKLVSLSEQELIDCDPYDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
T G LSEQ+L+DC GC G+ + ++WVI NGG+TTEA YP
Sbjct: 360 TGGSPPVLSEQQLVDCSTLHHGCGRGWMDDAFKWVIMNGGITTEAAYP 503
Score = 63.4 bits (132), Expect(3) = 1e-030
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +1 / +1
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAFVTAATIES 531
DWR+KG VTP KNQG +C SCWAF + AT+ES
Sbjct: 250 DWRAKGVVTPAKNQGATCFSCWAFTSVATMES 345
Score = 49.6 bits (102), Expect(3) = 1e-030
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +1 / +1
Query: 238 NIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 1 NMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 108
>gb|CA020367.1|CA020367 HZ36B11r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36B11
5-PRIME, mRNA sequence
Length = 543
Score = 58.8 bits (122), Expect(4) = 2e-030
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +1 / +1
Query: 487 CSSCWAFVTAATIESITKITTGKLVSLSEQELIDCD 594
C SCWAF T A +E I I T L SLSEQ+L+DCD
Sbjct: 22 CGSCWAFSTIAAVEGINAIRTKNLTSLSEQQLVDCD 129
Score = 55.1 bits (114), Expect(4) = 2e-030
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1 / +1
Query: 937 GLKYWLVKNSWGQSWGERGYLRM 1005
G KYW+VKNSWG WGE+GY+RM
Sbjct: 475 GTKYWIVKNSWGPEWGEKGYIRM 543
Score = 51.5 bits (106), Expect(4) = 2e-030
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1 / +1
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G QFYS GVF+G+CGT ++H + VGYG
Sbjct: 373 GSHFQFYSEGVFAGKCGTELDHGVAAVGYG 462
Score = 28.6 bits (56), Expect(4) = 2e-030
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +1 / +1
Query: 601 DGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
+ GCN G ++++ ++GG+ E YP
Sbjct: 139 NAGCNGGLMDYAFQYIAKHGGVAAEDAYP 225
>gb|AV924771.1|AV924771 AV924771 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16o06 5', mRNA sequence
Length = 571
Score = 101 bits (215), Expect(2) = 3e-030
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +1 / +2
Query: 55 ILLACCSLIMLAAASXXXXXXXXXXXXXRLMMDRFLSWQATYNRSYPTAEERQRRFQVYR 234
+L+A I A+S LM+ RF W A + RSYPT EE+ RRF+VYR
Sbjct: 50 LLVAAAFFIPSTASSASHTLDHGLDGEALLMLGRFHGWMAAHGRSYPTVEEKLRRFEVYR 229
Query: 235 RNIEHIEATNRAGNLTYTLGENQFADLTEEEFLDLYT 345
N+E IEA NR ++Y+LGE F DLT +EF+ +Y+
Sbjct: 230 SNMEFIEAANRDSRMSYSLGETPFTDLTHDEFMAMYS 340
Score = 54.2 bits (112), Expect(2) = 3e-030
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +1 / +2
Query: 436 DWRSKGAVTPIKNQGPSCSSCWAF 507
DWR+KG VTP KNQG +C SCWAF
Sbjct: 482 DWRAKGVVTPAKNQGATCFSCWAF 553
>gb|AV922852.1|AV922852 AV922852 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2j23 5', mRNA sequence
Length = 595
Score = 61.1 bits (127), Expect(4) = 1e-029
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +1 / +1
Query: 475 QGPSCSSCWAFVTAATIESITKITTGKLVSLSEQELIDC 591
Q +C CWAF AAT+ES+ KI G+LV LS QEL+DC
Sbjct: 13 QQGACGCCWAFAAAATVESLNKINGGELVDLSVQELVDC 129
Score = 50.6 bits (104), Expect(4) = 1e-029
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 928 SSSGLKYWLVKNSWGQSWGERGYLRMRR 1011
+ +G +YW+ KNSWGQ+WG+ G+ MRR
Sbjct: 478 TGAGEEYWIAKNSWGQTWGQNGFFFMRR 561
Score = 46.4 bits (95), Expect(4) = 1e-029
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +1 / +1
Query: 832 GGSLQFYSGGVFSGQCGTRMNHAITVVGYG 921
G LQ Y GV+ G C T NH +TVVGYG
Sbjct: 385 GSVLQNYKSGVYKGPCTTSQNHVVTVVGYG 474
Score = 33.1 bits (66), Expect(4) = 1e-029
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1 / +1
Query: 598 YDGGCNLGYFVNGYRWVIQNGGLTTEANYP 687
+ C G+ + +W+ GGL TEA YP
Sbjct: 142 FSSPCGYGWPKSALQWIKSKGGLLTEAEYP 231
>gb|AV926076.1|AV926076 AV926076 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18a14 5', mRNA sequence
Length = 558
Score = 61.1 bits (127), Expect(4) = 1e-029
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +1 / +3
Query: 475 QGPSCSSCWAFVTAATIESITKITTGKLVSLSEQELIDC 591
Q +C CWAF AAT+ES+ KI G+LV LS QEL+DC
Sbjct: 420 QQGACGCCWAFAAAATVESLNKINGGELVDLSVQELVDC 536
Score = 60.6 bits (126), Expect(4) = 1e-029
Identities = 21/42 (50%), Positives = 33/42 (78%)
Frame = +1 / +3
Query: 142 LMMDRFLSWQATYNRSYPTAEERQRRFQVYRRNIEHIEATNR 267
LM+ RF W +++ R+YP+A E+ RRF+ YRRN++ I+A+NR
Sbjct: 42 LMLGRFHRWMSSHRRTYPSAAEKLRRFEAYRRNVDLIDASNR 167
Score = 37.7 bits (76), Expect(4) = 1e-029
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1 / +3
Query: 268 AGNLTYTLGENQFADLTEEEFLDLY 342
A L Y LGEN+F DLT EEF+ Y
Sbjct: 171 AERLGYELGENEFTDLTNEEFMTRY 245
Score = 31.3 bits (62), Expect(4) = 1e-029
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 436 DWRSKGAVTPIKNQG 480
DWR GAVTP K QG
Sbjct: 384 DWREHGAVTPAKQQG 428
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 445,109,708
Number of Sequences: 312970
Number of extensions: 5924739
Number of successful extensions: 50599
Number of sequences better than 1.0e-020: 183
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 17134215290
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)