TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204680.2.2
(534 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM377612.2|BM377612 EBem04_SQ003_K14_R embryo, 12 DPA, n... 279 7e-075
gb|BG368878.2|BG368878 HVSMEi0021B19f Hordeum vulgare 20 DA... 278 2e-074
gb|BJ466421.1|BJ466421 BJ466421 K. Sato unpublished cDNA li... 278 2e-074
gb|BJ468318.1|BJ468318 BJ468318 K. Sato unpublished cDNA li... 278 2e-074
gb|BJ473517.1|BJ473517 BJ473517 K. Sato unpublished cDNA li... 278 2e-074
gb|BJ475564.1|BJ475564 BJ475564 K. Sato unpublished cDNA li... 278 2e-074
gb|BJ475971.1|BJ475971 BJ475971 K. Sato unpublished cDNA li... 278 2e-074
gb|BQ663837.1|BQ663837 HU04E06u HU Hordeum vulgare subsp. v... 278 2e-074
gb|BQ664128.1|BQ664128 HV01P19w HV Hordeum vulgare subsp. v... 278 2e-074
gb|BU986428.1|BU986428 HF11M21r HF Hordeum vulgare subsp. v... 278 2e-074
gb|CA019787.1|CA019787 HV13C16r HV Hordeum vulgare subsp. v... 278 2e-074
gb|CB881237.1|CB881237 HM09D03w HM Hordeum vulgare subsp. v... 278 2e-074
dbj|AB063178.1| Hordeum vulgare BBD2 mRNA for betaine aldeh... 278 2e-074
gb|AV832590.1|AV832590 AV832590 K. Sato unpublished cDNA li... 275 1e-073
gb|CV060030.1|CV060030 BNEL53f12 Barley EST endosperm libra... 275 1e-073
gb|BQ767898.1|BQ767898 EBro08_SQ010_K04_R root, 3 week, dro... 274 2e-073
gb|BJ471121.1|BJ471121 BJ471121 K. Sato unpublished cDNA li... 273 6e-073
gb|BJ475484.1|BJ475484 BJ475484 K. Sato unpublished cDNA li... 273 6e-073
gb|CV063841.1|CV063841 BNEL93g5 Barley EST endosperm librar... 264 3e-070
gb|BM371740.2|BM371740 EBma08_SQ003_M14_R maternal, 28 DPA,... 263 5e-070
gb|BJ463439.1|BJ463439 BJ463439 K. Sato unpublished cDNA li... 260 4e-069
gb|BQ766572.1|BQ766572 EBro08_SQ006_A18_R root, 3 week, dro... 253 4e-067
gb|BU975354.1|BU975354 HB30O13r BC Hordeum vulgare subsp. v... 251 2e-066
gb|BG299265.1|BG299265 HVSMEa0019A19f Hordeum vulgare seedl... 248 1e-065
gb|AL509634.1|AL509634 AL509634 Hordeum vulgare Barke devel... 181 3e-065
gb|BU989601.1|BU989601 HF22C24r HF Hordeum vulgare subsp. v... 243 6e-064
gb|AV834368.1|AV834368 AV834368 K. Sato unpublished cDNA li... 229 1e-059
dbj|AB063179.1| Hordeum vulgare BBD1 mRNA for betaine aldeh... 229 1e-059
gb|AJ436269.1|AJ436269 AJ436269 S00002 Hordeum vulgare subs... 222 9e-058
gb|BM376177.1|BM376177 EBma01_SQ002_J06_R maternal, 4 DPA, ... 206 9e-053
gb|CV064014.1|CV064014 BNEL96d4 Barley EST endosperm librar... 199 1e-050
gb|BU990251.1|BU990251 HF24I09r HF Hordeum vulgare subsp. v... 198 3e-050
gb|BU995181.1|BU995181 HM09H12r HM Hordeum vulgare subsp. v... 188 1e-047
gb|CB881326.1|CB881326 HM09H12w HM Hordeum vulgare subsp. v... 188 1e-047
gb|CA000599.1|CA000599 HS07M01u HS Hordeum vulgare subsp. v... 174 3e-043
gb|BU984894.1|BU984894 HF05G21r HF Hordeum vulgare subsp. v... 172 1e-042
gb|BG415892.1|BG415892 HVSMEk0008M13f Hordeum vulgare testa... 171 3e-042
gb|BJ472041.1|BJ472041 BJ472041 K. Sato unpublished cDNA li... 166 1e-040
gb|BJ470674.1|BJ470674 BJ470674 K. Sato unpublished cDNA li... 164 4e-040
gb|BE060881.2|BE060881 HVSMEg0013L09f Hordeum vulgare pre-a... 163 6e-040
gb|BM817302.1|BM817302 HC105A10_T3.ab1 HC Hordeum vulgare s... 160 4e-039
gb|BQ663294.1|BQ663294 HU02A14u HU Hordeum vulgare subsp. v... 153 7e-037
gb|BQ763641.1|BQ763641 EBro03_SQ005_C06_R root, 3 week, wat... 150 6e-036
gb|BM370947.2|BM370947 EBro04_SQ003_A05_R root, 3 week, sal... 125 2e-028
gb|CA005501.1|CA005501 HU10B24u HU Hordeum vulgare subsp. v... 117 2e-026
gb|AV917894.1|AV917894 AV917894 K. Sato unpublished cDNA li... 111 2e-024
gb|AV929175.1|AV929175 AV929175 K. Sato unpublished cDNA li... 111 2e-024
gb|BJ448569.1|BJ448569 BJ448569 K. Sato unpublished cDNA li... 111 2e-024
gb|BJ456291.1|BJ456291 BJ456291 K. Sato unpublished cDNA li... 111 2e-024
gb|BQ464230.1|BQ464230 HF01L06T HF Hordeum vulgare subsp. v... 111 2e-024
gb|BQ466268.1|BQ466268 HT02B02r HT Hordeum vulgare subsp. v... 111 2e-024
gb|BQ659782.1|BQ659782 HF01L06w HF Hordeum vulgare subsp. v... 111 2e-024
gb|BU981973.1|BU981973 HA25C12r HA Hordeum vulgare subsp. v... 111 2e-024
gb|CA000617.1|CA000617 HS07N10u HS Hordeum vulgare subsp. v... 111 2e-024
gb|CA009784.1|CA009784 HT12M08u HT Hordeum vulgare subsp. v... 111 2e-024
gb|CA015545.1|CA015545 HT14K09r HT Hordeum vulgare subsp. v... 111 2e-024
gb|BQ762078.1|BQ762078 EBpi01_SQ005_B21_R pistil, 1 DPA, no... 111 4e-024
gb|BI948988.1|BI948988 HVSMEl0011N01f Hordeum vulgare spike... 107 4e-023
gb|AW983019.2|AW983019 HVSMEg0004N09f Hordeum vulgare pre-a... 104 5e-022
gb|BQ761582.1|BQ761582 EBem10_SQ001_N02_R embryo, 2 Day ger... 104 5e-022
gb|BU984313.1|BU984313 HF03J09r HF Hordeum vulgare subsp. v... 102 2e-021
gb|BI776695.2|BI776695 EBpi07_SQ001_H11_R pistil, 12 DPA, n... 101 2e-021
gb|BF267540.2|BF267540 HV_CEa0018D16f Hordeum vulgare seedl... 101 3e-021
gb|AV921807.1|AV921807 AV921807 K. Sato unpublished cDNA li... 101 3e-021
gb|AV931272.1|AV931272 AV931272 K. Sato unpublished cDNA li... 101 3e-021
gb|BM815988.1|BM815988 HC108H09_SK.ab1 HC Hordeum vulgare s... 101 3e-021
gb|BU972798.1|BU972798 HB22L24r BC Hordeum vulgare subsp. v... 101 3e-021
gb|BJ544355.1|BJ544355 BJ544355 K. Sato unpublished cDNA li... 101 3e-021
gb|BJ544525.1|BJ544525 BJ544525 K. Sato unpublished cDNA li... 101 3e-021
gb|BJ545493.1|BJ545493 BJ545493 K. Sato unpublished cDNA li... 101 3e-021
gb|BJ545810.1|BJ545810 BJ545810 K. Sato unpublished cDNA li... 101 3e-021
gb|BJ545985.1|BJ545985 BJ545985 K. Sato unpublished cDNA li... 101 3e-021
gb|BJ548158.1|BJ548158 BJ548158 K. Sato unpublished cDNA li... 101 3e-021
gb|BJ548794.1|BJ548794 BJ548794 K. Sato unpublished cDNA li... 101 3e-021
dbj|AB055519.1| Hordeum vulgare mRNA for mitochondrial alde... 101 3e-021
>gb|BM377612.2|BM377612 EBem04_SQ003_K14_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_K14 5', mRNA sequence
Length = 510
Score = 279 bits (604), Expect = 7e-075
Identities = 107/117 (91%), Positives = 113/117 (96%)
Frame = +2 / +3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRLSEEI+AG
Sbjct: 12 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLSEEIEAGC 191
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 192 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 362
Score = 164 bits (352), Expect = 4e-040
Identities = 72/113 (63%), Positives = 81/113 (71%)
Frame = -2 / -1
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
T PTAHQ CTP A* SGSYQCPLL+A Q AC RP E GRS+A SS PR +SPQ
Sbjct: 348 TTPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSRPTELGRSKAASSSPRCIPLRSPQ 169
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
IISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 168 IISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 10
Score = 142 bits (305), Expect = 1e-033
Identities = 65/113 (57%), Positives = 77/113 (68%)
Frame = -3 / -2
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+P P DAQVVINAPF LV AP SLAEA L AV+PD S +LL
Sbjct: 350 VPPPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPAPRSLAEARLRAVHPDASRFDLL 171
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
R*SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 170 R*SLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 12
Score = 122 bits (262), Expect(2) = 7e-034
Identities = 52/74 (70%), Positives = 54/74 (72%)
Frame = -1 / -3
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISSDNLW RSRSPEITAPA+P THR
Sbjct: 232 GAWQKQGCEQFTQMHPASISSDNLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 53
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 52 TGPKTSSLQISIDV 11
Score = 81.3 bits (171), Expect(2) = 8e-024
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +1 / +2
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEII*GD
Sbjct: 11 HINGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEII*GD 178
Score = 48.3 bits (99), Expect(2) = 8e-024
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +1 / +2
Query: 232 R*QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
R QA +W A RRGH**LPE QA GVH+* AVG+V
Sbjct: 239 REQAQRLWARARRRGH**LPEHQAGDGVHI*CAVGVV 349
Score = 40.5 bits (82), Expect(2) = 7e-034
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / -3
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 364 LAGALYHPHGASDVYSVTCL 305
>gb|BG368878.2|BG368878 HVSMEi0021B19f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021B19f, mRNA sequence
Length = 749
Score = 278 bits (601), Expect = 2e-074
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = +2 / +2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 209 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 388
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 389 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 559
Score = 163 bits (350), Expect = 8e-040
Identities = 71/113 (62%), Positives = 81/113 (71%)
Frame = -2 / -1
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
T PTAHQ CTP A* SGSYQCPLL+A Q AC RP E GRS+A SS PR +SPQ
Sbjct: 545 TTPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSRPTELGRSKAASSSPRCIPLRSPQ 366
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
+ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 365 LISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 207
Score = 139 bits (299), Expect = 8e-033
Identities = 64/113 (56%), Positives = 76/113 (67%)
Frame = -3 / -2
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+P P DAQVVINAPF LV AP SLAEA L AV+PD S +LL
Sbjct: 547 VPPPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPAPRSLAEARLRAVHPDASRFDLL 368
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
*SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 367 S*SLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 209
Score = 119 bits (254), Expect(2) = 8e-033
Identities = 51/74 (68%), Positives = 53/74 (71%)
Frame = -1 / -3
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 429 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 250
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 249 TGPKTSSLQISIDV 208
Score = 78.5 bits (165), Expect(2) = 5e-023
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +1 / +1
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 208 HINGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEIS*GD 375
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +1 / +1
Query: 232 R*QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
R QA +W A RRGH**LPE QA GVH+* AVG+V
Sbjct: 436 REQAQRLWARARRRGH**LPEHQAGDGVHI*CAVGVV 546
Score = 40.5 bits (82), Expect(2) = 8e-033
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / -3
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 561 LAGALYHPHGASDVYSVTCL 502
>gb|BJ466421.1|BJ466421 BJ466421 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32a22 3', mRNA sequence
Length = 614
Score = 278 bits (601), Expect = 2e-074
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = +2 / -3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 450 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 271
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 270 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 100
Score = 161 bits (346), Expect = 3e-039
Identities = 71/113 (62%), Positives = 80/113 (70%)
Frame = -2 / +3
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 114 TIPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 293
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 294 PISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 452
Score = 138 bits (297), Expect = 2e-032
Identities = 63/113 (55%), Positives = 76/113 (67%)
Frame = -3 / +1
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+PSP DAQVVINAPF LV P SLAEA L AV+PD S ++LL
Sbjct: 112 VPSPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLL 291
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 292 SQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 450
Score = 119 bits (254), Expect(2) = 8e-033
Identities = 51/74 (68%), Positives = 53/74 (71%)
Frame = -1 / +2
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 230 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 409
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 410 TGPKTSSLQISIDV 451
Score = 77.6 bits (163), Expect(2) = 4e-023
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +1 / -2
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 451 HINGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEIG*GD 284
Score = 49.6 bits (102), Expect(2) = 4e-023
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +1 / -2
Query: 238 QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
QA +W A RRGH**LPE QA GVH+* AVGMV
Sbjct: 217 QAQRLWARARRRGH**LPEHQAGDGVHI*CAVGMV 113
Score = 40.5 bits (82), Expect(2) = 8e-033
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / +2
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 98 LAGALYHPHGASDVYSVTCL 157
>gb|BJ468318.1|BJ468318 BJ468318 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38d10 3', mRNA sequence
Length = 713
Score = 278 bits (601), Expect = 2e-074
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = +2 / -3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 483 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 304
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 303 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 133
Score = 161 bits (346), Expect = 3e-039
Identities = 71/113 (62%), Positives = 80/113 (70%)
Frame = -2 / +3
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 147 TIPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 326
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 327 PISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 485
Score = 138 bits (297), Expect = 2e-032
Identities = 63/113 (55%), Positives = 76/113 (67%)
Frame = -3 / +1
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+PSP DAQVVINAPF LV P SLAEA L AV+PD S ++LL
Sbjct: 145 VPSPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLL 324
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 325 SQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 483
Score = 119 bits (254), Expect(2) = 8e-033
Identities = 51/74 (68%), Positives = 53/74 (71%)
Frame = -1 / +2
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 263 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 442
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 443 TGPKTSSLQISIDV 484
Score = 77.6 bits (163), Expect(2) = 4e-023
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +1 / -2
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 484 HINGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEIG*GD 317
Score = 49.6 bits (102), Expect(2) = 4e-023
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +1 / -2
Query: 238 QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
QA +W A RRGH**LPE QA GVH+* AVGMV
Sbjct: 250 QAQRLWARARRRGH**LPEHQAGDGVHI*CAVGMV 146
Score = 40.5 bits (82), Expect(2) = 8e-033
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / +2
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 131 LAGALYHPHGASDVYSVTCL 190
>gb|BJ473517.1|BJ473517 BJ473517 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12p17 3', mRNA sequence
Length = 705
Score = 278 bits (601), Expect = 2e-074
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = +2 / -1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 585 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 406
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 405 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 235
Score = 161 bits (346), Expect = 3e-039
Identities = 71/113 (62%), Positives = 80/113 (70%)
Frame = -2 / +3
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 249 TIPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 428
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 429 PISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 587
Score = 138 bits (297), Expect = 2e-032
Identities = 63/113 (55%), Positives = 76/113 (67%)
Frame = -3 / +1
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+PSP DAQVVINAPF LV P SLAEA L AV+PD S ++LL
Sbjct: 247 VPSPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLL 426
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 427 SQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 585
Score = 119 bits (254), Expect(2) = 8e-033
Identities = 51/74 (68%), Positives = 53/74 (71%)
Frame = -1 / +2
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 365 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 544
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 545 TGPKTSSLQISIDV 586
Score = 77.6 bits (163), Expect(2) = 4e-023
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +1 / -3
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 586 HINGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEIG*GD 419
Score = 49.6 bits (102), Expect(2) = 4e-023
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +1 / -3
Query: 238 QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
QA +W A RRGH**LPE QA GVH+* AVGMV
Sbjct: 352 QAQRLWARARRRGH**LPEHQAGDGVHI*CAVGMV 248
Score = 40.5 bits (82), Expect(2) = 8e-033
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / +2
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 233 LAGALYHPHGASDVYSVTCL 292
>gb|BJ475564.1|BJ475564 BJ475564 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal26h04 3', mRNA sequence
Length = 606
Score = 278 bits (601), Expect = 2e-074
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = +2 / -1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 570 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 391
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 390 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 220
Score = 161 bits (346), Expect = 3e-039
Identities = 71/113 (62%), Positives = 80/113 (70%)
Frame = -2 / +3
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 234 TIPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 413
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 414 PISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 572
Score = 138 bits (297), Expect = 2e-032
Identities = 63/113 (55%), Positives = 76/113 (67%)
Frame = -3 / +1
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+PSP DAQVVINAPF LV P SLAEA L AV+PD S ++LL
Sbjct: 232 VPSPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLL 411
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 412 SQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 570
Score = 119 bits (254), Expect(2) = 8e-033
Identities = 51/74 (68%), Positives = 53/74 (71%)
Frame = -1 / +2
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 350 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 529
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 530 TGPKTSSLQISIDV 571
Score = 77.6 bits (163), Expect(2) = 4e-023
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +1 / -3
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 571 HINGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEIG*GD 404
Score = 49.6 bits (102), Expect(2) = 4e-023
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +1 / -3
Query: 238 QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
QA +W A RRGH**LPE QA GVH+* AVGMV
Sbjct: 337 QAQRLWARARRRGH**LPEHQAGDGVHI*CAVGMV 233
Score = 40.5 bits (82), Expect(2) = 8e-033
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / +2
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 218 LAGALYHPHGASDVYSVTCL 277
>gb|BJ475971.1|BJ475971 BJ475971 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30n10 3', mRNA sequence
Length = 708
Score = 278 bits (601), Expect = 2e-074
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = +2 / -3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 544 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 365
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 364 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 194
Score = 161 bits (346), Expect = 3e-039
Identities = 71/113 (62%), Positives = 80/113 (70%)
Frame = -2 / +1
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 208 TIPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 387
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 388 PISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 546
Score = 138 bits (297), Expect = 2e-032
Identities = 63/113 (55%), Positives = 76/113 (67%)
Frame = -3 / +2
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+PSP DAQVVINAPF LV P SLAEA L AV+PD S ++LL
Sbjct: 206 VPSPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLL 385
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 386 SQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 544
Score = 119 bits (254), Expect(2) = 8e-033
Identities = 51/74 (68%), Positives = 53/74 (71%)
Frame = -1 / +3
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 324 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 503
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 504 TGPKTSSLQISIDV 545
Score = 77.6 bits (163), Expect(2) = 4e-023
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +1 / -2
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 545 HINGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEIG*GD 378
Score = 49.6 bits (102), Expect(2) = 4e-023
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +1 / -2
Query: 238 QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
QA +W A RRGH**LPE QA GVH+* AVGMV
Sbjct: 311 QAQRLWARARRRGH**LPEHQAGDGVHI*CAVGMV 207
Score = 40.5 bits (82), Expect(2) = 8e-033
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / +3
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 192 LAGALYHPHGASDVYSVTCL 251
>gb|BQ663837.1|BQ663837 HU04E06u HU Hordeum vulgare subsp. vulgare cDNA clone HU04E06
3-PRIME, mRNA sequence
Length = 571
Score = 278 bits (601), Expect = 2e-074
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = +2 / -1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 553 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 374
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 373 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 203
Score = 161 bits (346), Expect = 3e-039
Identities = 71/113 (62%), Positives = 80/113 (70%)
Frame = -2 / +1
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 217 TIPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 396
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 397 PISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 555
Score = 138 bits (297), Expect = 2e-032
Identities = 63/113 (55%), Positives = 76/113 (67%)
Frame = -3 / +2
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+PSP DAQVVINAPF LV P SLAEA L AV+PD S ++LL
Sbjct: 215 VPSPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLL 394
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 395 SQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 553
Score = 119 bits (254), Expect(2) = 8e-033
Identities = 51/74 (68%), Positives = 53/74 (71%)
Frame = -1 / +3
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 333 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 512
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 513 TGPKTSSLQISIDV 554
Score = 77.6 bits (163), Expect(2) = 4e-023
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +1 / -3
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 554 HINGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEIG*GD 387
Score = 49.6 bits (102), Expect(2) = 4e-023
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +1 / -3
Query: 238 QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
QA +W A RRGH**LPE QA GVH+* AVGMV
Sbjct: 320 QAQRLWARARRRGH**LPEHQAGDGVHI*CAVGMV 216
Score = 40.5 bits (82), Expect(2) = 8e-033
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / +3
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 201 LAGALYHPHGASDVYSVTCL 260
>gb|BQ664128.1|BQ664128 HV01P19w HV Hordeum vulgare subsp. vulgare cDNA clone HV01P19
3-PRIME, mRNA sequence
Length = 535
Score = 278 bits (601), Expect = 2e-074
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = +2 / -2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 501 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 322
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 321 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 151
Score = 161 bits (346), Expect = 3e-039
Identities = 71/113 (62%), Positives = 80/113 (70%)
Frame = -2 / +3
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 165 TIPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 344
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 345 PISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 503
Score = 138 bits (297), Expect = 2e-032
Identities = 63/113 (55%), Positives = 76/113 (67%)
Frame = -3 / +1
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+PSP DAQVVINAPF LV P SLAEA L AV+PD S ++LL
Sbjct: 163 VPSPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLL 342
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 343 SQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 501
Score = 119 bits (254), Expect(2) = 8e-033
Identities = 51/74 (68%), Positives = 53/74 (71%)
Frame = -1 / +2
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 281 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 460
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 461 TGPKTSSLQISIDV 502
Score = 77.6 bits (163), Expect(2) = 4e-023
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +1 / -1
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 502 HINGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEIG*GD 335
Score = 49.6 bits (102), Expect(2) = 4e-023
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +1 / -1
Query: 238 QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
QA +W A RRGH**LPE QA GVH+* AVGMV
Sbjct: 268 QAQRLWARARRRGH**LPEHQAGDGVHI*CAVGMV 164
Score = 40.5 bits (82), Expect(2) = 8e-033
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / +2
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 149 LAGALYHPHGASDVYSVTCL 208
>gb|BU986428.1|BU986428 HF11M21r HF Hordeum vulgare subsp. vulgare cDNA clone HF11M21
5-PRIME, mRNA sequence
Length = 581
Score = 278 bits (601), Expect = 2e-074
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = +2 / +3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 90 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 269
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 270 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 440
Score = 161 bits (346), Expect = 3e-039
Identities = 71/113 (62%), Positives = 80/113 (70%)
Frame = -2 / -3
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 426 TIPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 247
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 246 PISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 88
Score = 138 bits (297), Expect = 2e-032
Identities = 63/113 (55%), Positives = 76/113 (67%)
Frame = -3 / -1
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+PSP DAQVVINAPF LV P SLAEA L AV+PD S ++LL
Sbjct: 428 VPSPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLL 249
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 248 SQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 90
Score = 119 bits (254), Expect(2) = 8e-033
Identities = 51/74 (68%), Positives = 53/74 (71%)
Frame = -1 / -2
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 310 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 131
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 130 TGPKTSSLQISIDV 89
Score = 77.6 bits (163), Expect(2) = 4e-023
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +1 / +2
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 89 HINGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEIG*GD 256
Score = 49.6 bits (102), Expect(2) = 4e-023
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +1 / +2
Query: 238 QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
QA +W A RRGH**LPE QA GVH+* AVGMV
Sbjct: 323 QAQRLWARARRRGH**LPEHQAGDGVHI*CAVGMV 427
Score = 40.5 bits (82), Expect(2) = 8e-033
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / -2
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 442 LAGALYHPHGASDVYSVTCL 383
>gb|CA019787.1|CA019787 HV13C16r HV Hordeum vulgare subsp. vulgare cDNA clone HV13C16
5-PRIME, mRNA sequence
Length = 491
Score = 278 bits (601), Expect = 2e-074
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = +2 / +3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 24 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 203
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 204 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 374
Score = 161 bits (346), Expect = 3e-039
Identities = 71/113 (62%), Positives = 80/113 (70%)
Frame = -2 / -3
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 360 TIPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 181
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 180 PISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 22
Score = 138 bits (297), Expect = 2e-032
Identities = 63/113 (55%), Positives = 76/113 (67%)
Frame = -3 / -1
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+PSP DAQVVINAPF LV P SLAEA L AV+PD S ++LL
Sbjct: 362 VPSPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLL 183
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 182 SQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 24
Score = 119 bits (254), Expect(2) = 2e-032
Identities = 51/74 (68%), Positives = 53/74 (71%)
Frame = -1 / -2
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 244 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 65
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 64 TGPKTSSLQISIDV 23
Score = 77.6 bits (163), Expect(2) = 4e-023
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +1 / +2
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 23 HINGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEIG*GD 190
Score = 49.6 bits (102), Expect(2) = 4e-023
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +1 / +2
Query: 238 QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
QA +W A RRGH**LPE QA GVH+* AVGMV
Sbjct: 257 QAQRLWARARRRGH**LPEHQAGDGVHI*CAVGMV 361
Score = 40.5 bits (82), Expect(2) = 2e-032
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / -2
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 376 LAGALYHPHGASDVYSVTCL 317
>gb|CB881237.1|CB881237 HM09D03w HM Hordeum vulgare subsp. vulgare cDNA clone HM09D03
3-PRIME, mRNA sequence
Length = 574
Score = 278 bits (601), Expect = 2e-074
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = +2 / -1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 574 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 395
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 394 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 224
Score = 157 bits (337), Expect = 5e-038
Identities = 70/112 (62%), Positives = 79/112 (70%)
Frame = -2 / +1
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 238 TIPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 417
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLM 6
ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLM
Sbjct: 418 PISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLM 573
Score = 138 bits (297), Expect = 2e-032
Identities = 63/113 (55%), Positives = 76/113 (67%)
Frame = -3 / +2
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+PSP DAQVVINAPF LV P SLAEA L AV+PD S ++LL
Sbjct: 236 VPSPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLL 415
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 416 SQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 574
Score = 117 bits (250), Expect(2) = 3e-032
Identities = 50/73 (68%), Positives = 52/73 (71%)
Frame = -1 / +3
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 354 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 533
Query: 45 TGPKTSSLQISID 7
TGPKTSSLQISID
Sbjct: 534 TGPKTSSLQISID 572
Score = 73.9 bits (155), Expect(2) = 5e-022
Identities = 35/55 (63%), Positives = 41/55 (74%)
Frame = +1 / -3
Query: 7 INGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
ING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 572 INGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEIG*GD 408
Score = 49.6 bits (102), Expect(2) = 5e-022
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +1 / -3
Query: 238 QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
QA +W A RRGH**LPE QA GVH+* AVGMV
Sbjct: 341 QAQRLWARARRRGH**LPEHQAGDGVHI*CAVGMV 237
Score = 40.5 bits (82), Expect(2) = 3e-032
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / +3
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 222 LAGALYHPHGASDVYSVTCL 281
>dbj|AB063178.1| Hordeum vulgare BBD2 mRNA for betaine aldehyde dehydrogenase,
complete cds
Length = 1889
Score = 278 bits (601), Expect = 2e-074
Identities = 106/117 (90%), Positives = 113/117 (96%)
Frame = +2 / +2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 1202 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 1381
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 1382 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 1552
Score = 161 bits (346), Expect = 3e-039
Identities = 71/113 (62%), Positives = 80/113 (70%)
Frame = -2 / -1
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 1538 TIPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 1359
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 1358 PISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 1200
Score = 138 bits (297), Expect = 2e-032
Identities = 63/113 (55%), Positives = 76/113 (67%)
Frame = -3 / -2
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+PSP DAQVVINAPF LV P SLAEA L AV+PD S ++LL
Sbjct: 1540 VPSPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLL 1361
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 1360 SQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 1202
Score = 119 bits (254), Expect(2) = 8e-033
Identities = 51/74 (68%), Positives = 53/74 (71%)
Frame = -1 / -3
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 1422 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 1243
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 1242 TGPKTSSLQISIDV 1201
Score = 77.6 bits (163), Expect(2) = 4e-023
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +1 / +1
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 1201 HINGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEIG*GD 1368
Score = 49.6 bits (102), Expect(2) = 4e-023
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +1 / +1
Query: 238 QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
QA +W A RRGH**LPE QA GVH+* AVGMV
Sbjct: 1435 QAQRLWARARRRGH**LPEHQAGDGVHI*CAVGMV 1539
Score = 40.5 bits (82), Expect(2) = 8e-033
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / -3
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 1554 LAGALYHPHGASDVYSVTCL 1495
>gb|AV832590.1|AV832590 AV832590 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare leaves vegetative stage Hordeum vulgare subsp.
vulgare cDNA clone baak1n06, mRNA sequence
Length = 674
Score = 275 bits (595), Expect = 1e-073
Identities = 105/117 (89%), Positives = 112/117 (95%)
Frame = +2 / -2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGD ERCQRL+EEI+AG
Sbjct: 640 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDSERCQRLAEEIEAGC 461
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 460 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 290
Score = 158 bits (339), Expect = 3e-038
Identities = 69/113 (61%), Positives = 80/113 (70%)
Frame = -2 / +1
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
T P AHQ CTP A* SGSYQCPLL+A Q AC RP E GRS+A SS PR +SPQ
Sbjct: 304 TTPRAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSRPTELGRSKAASSSPRCIPLRSPQ 483
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
+ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPP+K PLMC
Sbjct: 484 LISGIAHCHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPAKSPLMC 642
Score = 139 bits (299), Expect = 8e-033
Identities = 64/113 (56%), Positives = 76/113 (67%)
Frame = -3 / +2
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+P P DAQVVINAPF LV AP SLAEA L AV+PD S +LL
Sbjct: 302 VPPPGRIRCVLRHLLDAQVVINAPFSELSPKAAALVPAPRSLAEARLRAVHPDASRFDLL 481
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
*SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 482 S*SLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 640
Score = 113 bits (241), Expect(2) = 6e-030
Identities = 49/74 (66%), Positives = 51/74 (68%)
Frame = -1 / +3
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RS SPEITAPA+P THR
Sbjct: 420 GAWQKQGCEQFTQMHPASISSANLWHRSLSPEITAPARP**VSLASSMASSSVENSFTHR 599
Query: 45 TGPKTSSLQISIDV 4
TGPKTSS QISIDV
Sbjct: 600 TGPKTSSRQISIDV 641
Score = 76.2 bits (160), Expect(2) = 6e-022
Identities = 35/56 (62%), Positives = 41/56 (73%)
Frame = +1 / -1
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+L GGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 641 HINGDLAGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*Q*AMPEIS*GD 474
Score = 46.9 bits (96), Expect(2) = 6e-022
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1 / -1
Query: 232 R*QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
R QA +W A RRGH**LPE QA GVH+* A+G+V
Sbjct: 413 REQAQRLWARARRRGH**LPEHQAGDGVHI*CALGVV 303
Score = 36.8 bits (74), Expect(2) = 6e-030
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / +3
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHP G+S++YSVTCL
Sbjct: 288 LAGALYHPQGASDVYSVTCL 347
>gb|CV060030.1|CV060030 BNEL53f12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL53f12 5' similar to betaine
aldehyde dehydrogenase, mRNA sequence
Length = 587
Score = 275 bits (595), Expect = 1e-073
Identities = 105/117 (89%), Positives = 112/117 (95%)
Frame = +2 / -2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGD ERCQRL+EEI+AG
Sbjct: 520 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDSERCQRLAEEIEAGC 341
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 340 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 170
Score = 158 bits (339), Expect = 3e-038
Identities = 69/113 (61%), Positives = 80/113 (70%)
Frame = -2 / +1
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
T P AHQ CTP A* SGSYQCPLL+A Q AC RP E GRS+A SS PR +SPQ
Sbjct: 184 TTPRAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSRPTELGRSKAASSSPRCIPLRSPQ 363
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
+ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPP+K PLMC
Sbjct: 364 LISGIAHCHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPAKSPLMC 522
Score = 139 bits (299), Expect = 8e-033
Identities = 64/113 (56%), Positives = 76/113 (67%)
Frame = -3 / +2
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+P P DAQVVINAPF LV AP SLAEA L AV+PD S +LL
Sbjct: 182 VPPPGRIRCVLRHLLDAQVVINAPFSELSPKAAALVPAPRSLAEARLRAVHPDASRFDLL 361
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
*SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 362 S*SLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 520
Score = 113 bits (241), Expect(2) = 6e-030
Identities = 49/74 (66%), Positives = 51/74 (68%)
Frame = -1 / +3
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RS SPEITAPA+P THR
Sbjct: 300 GAWQKQGCEQFTQMHPASISSANLWHRSLSPEITAPARP**VSLASSMASSSVENSFTHR 479
Query: 45 TGPKTSSLQISIDV 4
TGPKTSS QISIDV
Sbjct: 480 TGPKTSSRQISIDV 521
Score = 76.2 bits (160), Expect(2) = 6e-022
Identities = 35/56 (62%), Positives = 41/56 (73%)
Frame = +1 / -1
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+L GGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 521 HINGDLAGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*Q*AMPEIS*GD 354
Score = 46.9 bits (96), Expect(2) = 6e-022
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1 / -1
Query: 232 R*QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
R QA +W A RRGH**LPE QA GVH+* A+G+V
Sbjct: 293 REQAQRLWARARRRGH**LPEHQAGDGVHI*CALGVV 183
Score = 36.8 bits (74), Expect(2) = 6e-030
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / +3
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHP G+S++YSVTCL
Sbjct: 168 LAGALYHPQGASDVYSVTCL 227
>gb|BQ767898.1|BQ767898 EBro08_SQ010_K04_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_K04 5', mRNA sequence
Length = 458
Score = 274 bits (593), Expect = 2e-073
Identities = 105/117 (89%), Positives = 112/117 (95%)
Frame = +2 / +1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 64 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 243
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGE GIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 244 IWVNCSQPCFCQAPWGGNKRSGFGRELGERGIDNYLSIKQVTEYTSDAPWGWYKAPA 414
Score = 161 bits (346), Expect = 3e-039
Identities = 70/113 (61%), Positives = 80/113 (70%)
Frame = -2 / -2
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
T PTAHQ CTP A* SGSYQCP L+A Q AC RP E GRS+A SS PR +SPQ
Sbjct: 400 TTPTAHQMCTPSPA*CSGSYQCPFLRALAQSRCACSRPTELGRSKAASSSPRCIPLRSPQ 221
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
+ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 220 LISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 62
Score = 139 bits (299), Expect = 8e-033
Identities = 64/113 (56%), Positives = 76/113 (67%)
Frame = -3 / -3
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+P P DAQVVINAPF LV AP SLAEA L AV+PD S +LL
Sbjct: 402 VPPPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPAPRSLAEARLRAVHPDASRFDLL 223
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
*SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 222 S*SLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 64
Score = 119 bits (254), Expect(2) = 8e-033
Identities = 51/74 (68%), Positives = 53/74 (71%)
Frame = -1 / -1
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 284 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 105
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 104 TGPKTSSLQISIDV 63
Score = 78.5 bits (165), Expect(2) = 1e-022
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +1 / +3
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 63 HINGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEIS*GD 230
Score = 46.9 bits (96), Expect(2) = 1e-022
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1 / +3
Query: 232 R*QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
R QA +W A R+GH**LPE QA GVH+* AVG+V
Sbjct: 291 REQAQRLWARARRKGH**LPEHQAGDGVHI*CAVGVV 401
Score = 40.5 bits (82), Expect(2) = 8e-033
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / -1
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 416 LAGALYHPHGASDVYSVTCL 357
>gb|BJ471121.1|BJ471121 BJ471121 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30n10 5', mRNA sequence
Length = 576
Score = 273 bits (590), Expect = 6e-073
Identities = 105/113 (92%), Positives = 109/113 (96%)
Frame = +2 / +2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 236 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 415
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWY 343
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY
Sbjct: 416 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWY 574
Score = 161 bits (346), Expect = 3e-039
Identities = 71/113 (62%), Positives = 80/113 (70%)
Frame = -2 / -2
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 572 TIPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 393
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 392 PISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 234
Score = 138 bits (297), Expect = 2e-032
Identities = 63/113 (55%), Positives = 76/113 (67%)
Frame = -3 / -3
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+PSP DAQVVINAPF LV P SLAEA L AV+PD S ++LL
Sbjct: 574 VPSPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLL 395
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 394 SQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 236
Score = 119 bits (254), Expect(2) = 4e-032
Identities = 51/74 (68%), Positives = 53/74 (71%)
Frame = -1 / -1
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 456 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 277
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 276 TGPKTSSLQISIDV 235
Score = 77.6 bits (163), Expect(2) = 4e-023
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +1 / +1
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 235 HINGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEIG*GD 402
Score = 49.6 bits (102), Expect(2) = 4e-023
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +1 / +1
Query: 238 QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
QA +W A RRGH**LPE QA GVH+* AVGMV
Sbjct: 469 QAQRLWARARRRGH**LPEHQAGDGVHI*CAVGMV 573
Score = 38.2 bits (77), Expect(2) = 4e-032
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = -1 / -1
Query: 342 YHPHGSSEMYSVTCL 298
YHPHG+S++YSVTCL
Sbjct: 573 YHPHGASDVYSVTCL 529
>gb|BJ475484.1|BJ475484 BJ475484 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal25o04 3', mRNA sequence
Length = 575
Score = 273 bits (590), Expect = 6e-073
Identities = 104/117 (88%), Positives = 111/117 (94%)
Frame = +2 / -3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM IWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 540 TSMXIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 361
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNY S+KQVTEY SD PWGWY++P+
Sbjct: 360 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYXSIKQVTEYTSDAPWGWYKAPA 190
Score = 157 bits (338), Expect = 3e-038
Identities = 70/113 (61%), Positives = 78/113 (69%)
Frame = -2 / +3
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* S SYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 204 TIPTAHQMCTPSPA*CSXSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 383
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
ISG AH H+K +HQ +H Y WPV+WL L I HTGLD+RLPPSK PLMC
Sbjct: 384 PISGIAHGHRKSRHQPDHNEYRWPVRWLPLX*KIPSHTGLDQRLPPSKXPLMC 542
Score = 135 bits (290), Expect = 1e-031
Identities = 62/113 (54%), Positives = 75/113 (66%)
Frame = -3 / +1
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+PSP DA VVINAPF LV P SLAEA L AV+PD S ++LL
Sbjct: 202 VPSPRRIRCVLRHLLDAXVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLL 381
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 382 SQSLASLTVTGNHGTSQTIMSIVGQFDGFLFXRKFLHTQDWTKDFLPPNXH*C 540
Score = 116 bits (249), Expect(2) = 4e-032
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / +2
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 320 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 499
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQ SIDV
Sbjct: 500 TGPKTSSLQXSIDV 541
Score = 76.7 bits (161), Expect(2) = 1e-021
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +1 / -2
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEI *GD
Sbjct: 541 HINGXLEGGSLWSSPVCEGIFYXRGSHRTGQRYSLWSGWCRDFR*P*AMPEIG*GD 374
Score = 45.5 bits (93), Expect(2) = 1e-021
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1 / -2
Query: 238 QA*WIWT*AWRRGH**LPERQASHGVHL**AVGMV 342
QA +W A RRGH**L E QA GVH+* AVGMV
Sbjct: 307 QAQRLWARARRRGH**LXEHQAGDGVHI*CAVGMV 203
Score = 40.5 bits (82), Expect(2) = 4e-032
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / +2
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 188 LAGALYHPHGASDVYSVTCL 247
>gb|CV063841.1|CV063841 BNEL93g5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL93g5 5' similar to betaine
aldehyde dehydrogenase, mRNA sequence
Length = 699
Score = 264 bits (570), Expect = 3e-070
Identities = 101/117 (86%), Positives = 110/117 (94%)
Frame = +2 / -3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEI REEVFGPVLCVKEFSTE+EAIEL NDT YGLAGAVISGD ERCQRL+EEI+AG
Sbjct: 541 TSMEICREEVFGPVLCVKEFSTEEEAIELPNDTHYGLAGAVISGDSERCQRLAEEIEAGC 362
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
IWVNCSQPCFCQAPWGGNKR+GFGRELG+GGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 361 IWVNCSQPCFCQAPWGGNKRNGFGRELGKGGIDNYLSIKQVTEYTSDAPWGWYKAPA 191
Score = 152 bits (326), Expect = 2e-036
Identities = 67/113 (59%), Positives = 77/113 (68%)
Frame = -2 / +1
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
T P AHQ CTP A* SGSYQCPL +A Q AC RP E GRS+A SS PR +SPQ
Sbjct: 205 TTPRAHQMCTPSPA*CSGSYQCPLFRALAQSRCACSRPTELGRSKAASSSPRCIPLRSPQ 384
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
+ISG AH H+K +HQ +H Y W V+WL L+ I HTGLD+RLPP K PLMC
Sbjct: 385 LISGIAHCHRKSRHQPDHNEYRWAVRWLPLR*KIPLHTGLDQRLPPGKSPLMC 543
Score = 134 bits (287), Expect = 4e-031
Identities = 63/113 (55%), Positives = 74/113 (65%)
Frame = -3 / +2
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+P P DAQVVINAPF LV AP SLAEA L AV+PD S +LL
Sbjct: 203 VPPPGRIRCVLRHLLDAQVVINAPFSELSPKAVALVPAPRSLAEARLRAVHPDASRFDLL 382
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
*SLA+LT+T N+ TS TI+ I+GQF+GF+F KF TQDWT+DFLP N H*C
Sbjct: 383 S*SLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLYTQDWTKDFLPANLH*C 541
Score = 84.0 bits (177), Expect(3) = 1e-027
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -1 / +3
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKP 109
GAWQKQGCEQFTQ+ PASISS NLW RS SPEITAPA+P
Sbjct: 321 GAWQKQGCEQFTQMHPASISSANLWHRSLSPEITAPARP 437
Score = 39.1 bits (79), Expect(3) = 1e-027
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -1 / +3
Query: 54 THRTGPKTSSLQISIDV 4
THRTGPKTSS QISIDV
Sbjct: 492 THRTGPKTSSRQISIDV 542
Score = 36.8 bits (74), Expect(3) = 1e-027
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1 / +3
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHP G+S++YSVTCL
Sbjct: 189 LAGALYHPQGASDVYSVTCL 248
>gb|BM371740.2|BM371740 EBma08_SQ003_M14_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ003_M14 5', mRNA sequence
Length = 482
Score = 263 bits (569), Expect = 5e-070
Identities = 103/110 (93%), Positives = 106/110 (96%)
Frame = +2 / +2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRLSEEI+AG
Sbjct: 152 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLSEEIEAGC 331
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PW
Sbjct: 332 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPW 481
Score = 162 bits (348), Expect = 1e-039
Identities = 71/111 (63%), Positives = 80/111 (72%)
Frame = -2 / -1
Query: 335 PTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQII 156
PTAHQ CTP A* SGSYQCPLL+A Q AC RP E GRS+A SS PR +SPQII
Sbjct: 482 PTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSRPTELGRSKAASSSPRCIPLRSPQII 303
Query: 155 SGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
SG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 302 SGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 150
Score = 141 bits (302), Expect(2) = 1e-035
Identities = 62/97 (63%), Positives = 73/97 (75%)
Frame = -3 / -2
Query: 295 AQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLLR*SLAALTITRNYSTS 116
AQVVINAPF LV AP SLAEA L AV+PD S +LLR*SLA+LT+T N+ TS
Sbjct: 442 AQVVINAPFSELSPKAAALVPAPRSLAEARLRAVHPDASRFDLLR*SLASLTVTGNHGTS 263
Query: 115 *TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 262 QTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 152
Score = 122 bits (262), Expect = 1e-027
Identities = 52/74 (70%), Positives = 54/74 (72%)
Frame = -1 / -3
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISSDNLW RSRSPEITAPA+P THR
Sbjct: 372 GAWQKQGCEQFTQMHPASISSDNLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 193
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 192 TGPKTSSLQISIDV 151
Score = 81.3 bits (171), Expect(2) = 2e-022
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +1 / +1
Query: 4 HINGNLEGGSLRSSPVC*RI*H*R*SH*TGQ*YTVWFSWCCNFW*S*ALPEII*GD 171
HING+LEGGSL SSPVC I + R SH TGQ Y++W WC +F * *A+PEII*GD
Sbjct: 151 HINGDLEGGSLWSSPVCEGIFYRRGSHRTGQRYSLWSGWCRDFR*P*AMPEII*GD 318
Score = 43.2 bits (88), Expect(2) = 2e-022
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +1 / +1
Query: 232 R*QA*WIWT*AWRRGH**LPERQASHGVHL**AV 333
R QA +W A RRGH**LPE QA GVH+* AV
Sbjct: 379 REQAQRLWARARRRGH**LPEHQAGDGVHI*CAV 480
Score = 28.1 bits (55), Expect(2) = 1e-035
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 333 HGSSEMYSVTCL 298
HG+S++YSVTCL
Sbjct: 480 HGASDVYSVTCL 445
>gb|BJ463439.1|BJ463439 BJ463439 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27l03 5', mRNA sequence
Length = 667
Score = 260 bits (562), Expect = 4e-069
Identities = 99/110 (90%), Positives = 106/110 (96%)
Frame = +2 / +2
Query: 26 EEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQ 205
EEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG IWVNCSQ
Sbjct: 11 EEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGCIWVNCSQ 190
Query: 206 PCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
PCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 191 PCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 340
Score = 146 bits (314), Expect = 7e-035
Identities = 65/106 (61%), Positives = 74/106 (69%)
Frame = -2 / -3
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 326 TIPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 147
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPP 24
ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPP
Sbjct: 146 PISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPP 9
Score = 121 bits (259), Expect = 3e-027
Identities = 57/106 (53%), Positives = 70/106 (66%)
Frame = -3 / -1
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+PSP DAQVVINAPF LV P SLAEA L AV+PD S ++LL
Sbjct: 328 VPSPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLL 149
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFL 26
SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+DFL
Sbjct: 148 SQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTKDFL 11
Score = 105 bits (223), Expect(2) = 1e-028
Identities = 44/67 (65%), Positives = 46/67 (68%)
Frame = -1 / -2
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 210 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 31
Query: 45 TGPKTSS 25
TGPKTSS
Sbjct: 30 TGPKTSS 10
Score = 40.5 bits (82), Expect(2) = 1e-028
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / -2
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 342 LAGALYHPHGASDVYSVTCL 283
>gb|BQ766572.1|BQ766572 EBro08_SQ006_A18_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ006_A18 5', mRNA sequence
Length = 486
Score = 253 bits (548), Expect = 4e-067
Identities = 96/107 (89%), Positives = 103/107 (96%)
Frame = +2 / +2
Query: 35 FGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCF 214
FGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG IWVNCSQPCF
Sbjct: 2 FGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGCIWVNCSQPCF 181
Query: 215 CQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
CQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 182 CQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 322
Score = 138 bits (295), Expect = 3e-032
Identities = 61/102 (59%), Positives = 71/102 (69%)
Frame = -2 / -2
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
T PTAHQ CTP A* SGSYQCPLL+A Q AC RP E GRS+A SS PR +SPQ
Sbjct: 308 TTPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSRPTELGRSKAASSSPRCIPLRSPQ 129
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDR 36
+ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+
Sbjct: 128 LISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQ 3
Score = 115 bits (245), Expect = 2e-025
Identities = 55/103 (53%), Positives = 67/103 (65%)
Frame = -3 / -3
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+P P DAQVVINAPF LV AP SLAEA L AV+PD S +LL
Sbjct: 310 VPPPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPAPRSLAEARLRAVHPDASRFDLL 131
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTE 35
*SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+
Sbjct: 130 S*SLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTK 2
Score = 99.1 bits (210), Expect(2) = 8e-027
Identities = 41/64 (64%), Positives = 43/64 (67%)
Frame = -1 / -1
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 192 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 13
Query: 45 TGPK 34
TGPK
Sbjct: 12 TGPK 1
Score = 40.5 bits (82), Expect(2) = 8e-027
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / -1
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 324 LAGALYHPHGASDVYSVTCL 265
>gb|BU975354.1|BU975354 HB30O13r BC Hordeum vulgare subsp. vulgare cDNA clone HB30O13
5-PRIME, mRNA sequence
Length = 474
Score = 251 bits (543), Expect = 2e-066
Identities = 99/106 (93%), Positives = 103/106 (97%)
Frame = +2 / +3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 156 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 335
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYIS 322
IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY S
Sbjct: 336 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTS 473
Score = 146 bits (313), Expect = 1e-034
Identities = 65/107 (60%), Positives = 74/107 (69%)
Frame = -2 / -1
Query: 323 QRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQIISGSA 144
Q CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ ISG A
Sbjct: 474 QMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQPISGIA 295
Query: 143 HDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
H H+K +HQ +H Y WPV+WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 294 HGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQRLPPSKSPLMC 154
Score = 135 bits (289), Expect = 2e-031
Identities = 59/97 (60%), Positives = 71/97 (73%)
Frame = -3 / -2
Query: 295 AQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLLR*SLAALTITRNYSTS 116
AQVVINAPF LV P SLAEA L AV+PD S ++LL SLA+LT+T N+ TS
Sbjct: 446 AQVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLLSQSLASLTVTGNHGTS 267
Query: 115 *TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 266 QTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 156
Score = 119 bits (254), Expect = 1e-026
Identities = 51/74 (68%), Positives = 53/74 (71%)
Frame = -1 / -3
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 376 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 197
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 196 TGPKTSSLQISIDV 155
>gb|BG299265.1|BG299265 HVSMEa0019A19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0019A19f, mRNA sequence
Length = 648
Score = 248 bits (537), Expect = 1e-065
Identities = 97/117 (82%), Positives = 105/117 (89%)
Frame = +2 / +1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAI+LANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 199 TSMEIWREEVFGPVLCVKEFSTEEEAIKLANDTHYGLAGAVISGDRERCQRLTEEIEAGC 378
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
+WVNCSQPCFC PWGGNKR GF RELGEGGIDNYLS+KQVTE SD P WY +P+
Sbjct: 379 MWVNCSQPCFCHTPWGGNKRIGFRRELGEGGIDNYLSIKQVTECTSDAP*WWYNAPA 549
Score = 143 bits (306), Expect = 9e-034
Identities = 66/113 (58%), Positives = 77/113 (68%)
Frame = -2 / -3
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
T TAHQ CT LA* SGSY+C LL+A + AC RP E GRS+AVSS P +S Q
Sbjct: 535 TTITAHQMCTQSLA*CSGSYRCRLLRALAESRCACSRPTECGRSKAVSSSPTCIPLRSLQ 356
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDRRLPPSKFPLMC 3
+ISG AH H+K +HQ +H Y WPV WL L+ I HTGLD+RLPPSK PLMC
Sbjct: 355 LISGIAHGHRKSRHQPDHNEYRWPV*WLPLR*KIPSHTGLDQRLPPSKSPLMC 197
Score = 127 bits (273), Expect(2) = 2e-033
Identities = 57/97 (58%), Positives = 70/97 (72%)
Frame = -3 / -1
Query: 295 AQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLLR*SLAALTITRNYSTS 116
AQVVI+A F LV AP S+AEA L*AV+P S +L *SLA+LT+T N+ TS
Sbjct: 489 AQVVIDAAFSELSPKADALVPAPRSVAEARL*AVHPHASRFDLFS*SLASLTVTGNHGTS 310
Query: 115 *TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*C 5
TI+ I+GQF+GF+F KF +TQDWT+DFLPPN H*C
Sbjct: 309 QTIMSIVGQFDGFLFGRKFLHTQDWTKDFLPPNLH*C 199
Score = 82.6 bits (174), Expect(2) = 2e-022
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = -1 / -2
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKP 109
G WQKQGCEQFT + PASISS NLW RSRSPEITAPA+P
Sbjct: 419 GVWQKQGCEQFTHMHPASISSVNLWHRSRSPEITAPARP 303
Score = 41.8 bits (85), Expect(2) = 2e-022
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -1 / -2
Query: 54 THRTGPKTSSLQISIDV 4
THRTGPKTSSLQISIDV
Sbjct: 248 THRTGPKTSSLQISIDV 198
Score = 34.1 bits (68), Expect(2) = 2e-033
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -1 / -2
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YH HG+S+++SVTCL
Sbjct: 551 LAGALYHHHGASDVHSVTCL 492
>gb|AL509634.1|AL509634 AL509634 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02G16u 3',
mRNA sequence
Length = 648
Score = 181 bits (390), Expect(3) = 3e-065
Identities = 65/74 (87%), Positives = 71/74 (95%)
Frame = +2 / -3
Query: 134 GDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTE 313
GDRERCQRL+EEI+AG IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTE
Sbjct: 370 GDRERCQRLAEEIEAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTE 191
Query: 314 YISDEPWGWYRSPS 355
Y SD PWGWY++P+
Sbjct: 190 YTSDAPWGWYKAPA 149
Score = 97.3 bits (206), Expect(3) = 6e-034
Identities = 44/72 (61%), Positives = 50/72 (69%)
Frame = -2 / +1
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 163 TIPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 342
Query: 161 IISGSAHDHQKL 126
ISG AH H+++
Sbjct: 343 PISGIAHGHREI 378
Score = 69.8 bits (146), Expect(4) = 7e-029
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = -1 / +3
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSP 133
GAWQKQGCEQFTQ+ PASISS NLW RSRSP
Sbjct: 279 GAWQKQGCEQFTQMHPASISSANLWHRSRSP 371
Score = 69.8 bits (146), Expect(3) = 3e-065
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +2 / -2
Query: 41 PVLCVKEFSTEDEAIELANDTQYGLAGAVIS 133
PVLCVKEFSTE+EAIELANDT YGLAGAVIS
Sbjct: 464 PVLCVKEFSTEEEAIELANDTHYGLAGAVIS 372
Score = 52.8 bits (109), Expect(3) = 6e-034
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = -3 / +3
Query: 130 NYSTS*TILCIIGQFNGFIFSAKFFNTQDWTEDFLP 23
N+ TS TI+ I+GQF+GF+F KF +TQDW + P
Sbjct: 375 NHGTSQTIMSIVGQFDGFLFGRKFLHTQDWDQRLPP 482
Score = 40.5 bits (82), Expect(4) = 7e-029
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / +3
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 147 LAGALYHPHGASDVYSVTCL 206
Score = 40.0 bits (81), Expect(4) = 7e-029
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -2 / +2
Query: 131 KLQHQLNHTVYHWPVQWLHLQC*IL*HTGL 42
K +HQ +H Y WPV+WL L+ I HTGL
Sbjct: 374 KSRHQPDHNEYRWPVRWLPLR*KIPSHTGL 463
Score = 35.9 bits (72), Expect(3) = 3e-065
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2 / -1
Query: 5 TSMEIWREEVFGP 43
TSMEIWREEVFGP
Sbjct: 501 TSMEIWREEVFGP 463
Score = 31.3 bits (62), Expect(3) = 6e-034
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -1 / +2
Query: 42 GPKTSSLQISIDV 4
GPKTSSLQISIDV
Sbjct: 464 GPKTSSLQISIDV 502
Score = 31.3 bits (62), Expect(4) = 7e-029
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3 / +1
Query: 58 FNTQDWTEDFLPPNFH*C 5
F + T+DFLPPN H*C
Sbjct: 448 FTHRTGTKDFLPPNLH*C 501
>gb|BU989601.1|BU989601 HF22C24r HF Hordeum vulgare subsp. vulgare cDNA clone HF22C24
5-PRIME, mRNA sequence
Length = 474
Score = 243 bits (525), Expect = 6e-064
Identities = 92/103 (89%), Positives = 99/103 (96%)
Frame = +2 / +3
Query: 47 LCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAP 226
LCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG IWVNCSQPCFCQAP
Sbjct: 12 LCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGCIWVNCSQPCFCQAP 191
Query: 227 WGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
WGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 192 WGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 320
Score = 133 bits (284), Expect = 1e-030
Identities = 60/100 (60%), Positives = 68/100 (68%)
Frame = -2 / -1
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
TIPTAHQ CTP A* SGSYQCPLL+A Q AC P E GRS+A SS PR +SPQ
Sbjct: 306 TIPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSHPTELGRSKAASSSPRCIPPRSPQ 127
Query: 161 IISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGL 42
ISG AH H+K +HQ +H Y WPV+WL L+ I HTGL
Sbjct: 126 PISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGL 7
Score = 103 bits (220), Expect = 7e-022
Identities = 51/99 (51%), Positives = 63/99 (63%)
Frame = -3 / -2
Query: 343 IPSPXXXXXXXXXXXDAQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLL 164
+PSP DAQVVINAPF LV P SLAEA L AV+PD S ++LL
Sbjct: 308 VPSPRRIRCVLRHLLDAQVVINAPFSELSPKAAALVPTPRSLAEARLRAVHPDASRLDLL 129
Query: 163 R*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQ 47
SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQ
Sbjct: 128 SQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQ 12
Score = 88.6 bits (187), Expect(2) = 1e-023
Identities = 37/60 (61%), Positives = 39/60 (65%)
Frame = -1 / -3
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 190 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 11
Score = 40.5 bits (82), Expect(2) = 1e-023
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / -3
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 322 LAGALYHPHGASDVYSVTCL 263
>gb|AV834368.1|AV834368 AV834368 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp.
vulgare cDNA clone bags15l21, mRNA sequence
Length = 635
Score = 229 bits (494), Expect = 1e-059
Identities = 88/120 (73%), Positives = 102/120 (85%)
Frame = +2 / -3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IWREEVFGPV+CVK F TE EA+ELANDT YGLAG VIS D ERC+R+++ I +GI
Sbjct: 600 TSMQIWREEVFGPVICVKVFKTESEAVELANDTHYGLAGGVISDDLERCERIAKVIHSGI 421
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
+W+NCSQP QAPWGGNKRSGFGRELGE G++NYLSVKQVT Y DE +GWY+ PSKL*
Sbjct: 420 VWINCSQPTLVQAPWGGNKRSGFGRELGEWGLENYLSVKQVTRYCKDELYGWYQRPSKL* 241
Score = 94.5 bits (200), Expect(2) = 4e-024
Identities = 45/98 (45%), Positives = 63/98 (64%)
Frame = -3 / +1
Query: 295 AQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLLR*SLAALTITRNYSTS 116
AQVV+ APF LV +P SL ++ L AVYP+NS +N L +L L I R+++TS
Sbjct: 310 AQVVLEAPFS*LPAETTPLVPSPRSLNQSRLRAVYPNNSRVNNLCDTLTPL*IIRDHTTS 489
Query: 115 *TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*CA 2
I+ II + +GF ++F+T DW++DFL PN H*CA
Sbjct: 490 QAIVRIICKLDGFALCLEYFHTDDWSKDFLSPNLH*CA 603
Score = 35.9 bits (72), Expect(2) = 4e-024
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1 / +2
Query: 378 NFMPVYSLEGDRYHPHGSSEMYSVTCLT 295
N +YSL+G Y P+ SS Y VTC T
Sbjct: 227 NSQVIYSLDGRWYQPYSSSLQYLVTCFT 310
>dbj|AB063179.1| Hordeum vulgare BBD1 mRNA for betaine aldehyde dehydrogenase,
complete cds
Length = 1909
Score = 229 bits (494), Expect = 1e-059
Identities = 88/120 (73%), Positives = 102/120 (85%)
Frame = +2 / +3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSM+IWREEVFGPV+CVK F TE EA+ELANDT YGLAG VIS D ERC+R+++ I +GI
Sbjct: 1230 TSMQIWREEVFGPVICVKVFKTESEAVELANDTHYGLAGGVISDDLERCERIAKVIHSGI 1409
Query: 185 IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
+W+NCSQP QAPWGGNKRSGFGRELGE G++NYLSVKQVT Y DE +GWY+ PSKL*
Sbjct: 1410 VWINCSQPTLVQAPWGGNKRSGFGRELGEWGLENYLSVKQVTRYCKDELYGWYQRPSKL* 1589
Score = 94.5 bits (200), Expect(2) = 4e-024
Identities = 45/98 (45%), Positives = 63/98 (64%)
Frame = -3 / -3
Query: 295 AQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLLR*SLAALTITRNYSTS 116
AQVV+ APF LV +P SL ++ L AVYP+NS +N L +L L I R+++TS
Sbjct: 1520 AQVVLEAPFS*LPAETTPLVPSPRSLNQSRLRAVYPNNSRVNNLCDTLTPL*IIRDHTTS 1341
Query: 115 *TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPNFH*CA 2
I+ II + +GF ++F+T DW++DFL PN H*CA
Sbjct: 1340 QAIVRIICKLDGFALCLEYFHTDDWSKDFLSPNLH*CA 1227
Score = 35.9 bits (72), Expect(2) = 4e-024
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1 / -1
Query: 378 NFMPVYSLEGDRYHPHGSSEMYSVTCLT 295
N +YSL+G Y P+ SS Y VTC T
Sbjct: 1603 NSQVIYSLDGRWYQPYSSSLQYLVTCFT 1520
>gb|AJ436269.1|AJ436269 AJ436269 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200024F01F1, mRNA sequence
Length = 600
Score = 222 bits (480), Expect = 9e-058
Identities = 85/117 (72%), Positives = 99/117 (84%)
Frame = +2 / +3
Query: 14 EIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWV 193
+IWREEVFGPV+CVK F TE EA+ELANDT YGLAG VIS D ERC+R+++ I +GI+W+
Sbjct: 6 QIWREEVFGPVICVKVFKTESEAVELANDTHYGLAGGVISDDLERCERIAKVIHSGIVWI 185
Query: 194 NCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
NCSQP QAPWGGNKRSGFGRELGE G++NYLSVKQVT Y DE +GWY+ PSKL*
Sbjct: 186 NCSQPTLVQAPWGGNKRSGFGRELGEWGLENYLSVKQVTRYCKDELYGWYQRPSKL* 356
Score = 84.5 bits (178), Expect(2) = 4e-021
Identities = 41/93 (44%), Positives = 59/93 (63%)
Frame = -3 / -2
Query: 295 AQVVINAPFXXXXXXXXXLVTAPGSLAEAGL*AVYPDNSSINLLR*SLAALTITRNYSTS 116
AQVV+ APF LV +P SL ++ L AVYP+NS +N L +L L I R+++TS
Sbjct: 287 AQVVLEAPFS*LPAETTPLVPSPRSLNQSRLRAVYPNNSRVNNLCDTLTPL*IIRDHTTS 108
Query: 115 *TILCIIGQFNGFIFSAKFFNTQDWTEDFLPPN 17
I+ II + +GF ++F+T DW++DFL PN
Sbjct: 107 QAIVRIICKLDGFALCLEYFHTDDWSKDFLSPN 9
Score = 35.9 bits (72), Expect(2) = 4e-021
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1 / -3
Query: 378 NFMPVYSLEGDRYHPHGSSEMYSVTCLT 295
N +YSL+G Y P+ SS Y VTC T
Sbjct: 370 NSQVIYSLDGRWYQPYSSSLQYLVTCFT 287
>gb|BM376177.1|BM376177 EBma01_SQ002_J06_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_J06 5', mRNA sequence
Length = 413
Score = 206 bits (444), Expect(2) = 9e-053
Identities = 76/86 (88%), Positives = 82/86 (95%)
Frame = +2 / +2
Query: 98 DTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGG 277
DT YGLAGAVISGDRERCQRL+EEI+AG IWVNCSQPCFCQAPWGGNKRSGFGRELGEGG
Sbjct: 2 DTHYGLAGAVISGDRERCQRLAEEIEAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGG 181
Query: 278 IDNYLSVKQVTEYISDEPWGWYRSPS 355
IDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 182 IDNYLSIKQVTEYTSDAPWGWYKAPA 259
Score = 110 bits (235), Expect = 6e-024
Identities = 49/81 (60%), Positives = 56/81 (69%)
Frame = -2 / -1
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
T PTAHQ CTP A* SGSYQCPLL+A Q AC RP E GRS+A SS PR +SPQ
Sbjct: 245 TTPTAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSRPTELGRSKAASSSPRCIPLRSPQ 66
Query: 161 IISGSAHDHQKLQHQLNHTVY 99
+ISG AH H+K +HQ +H Y
Sbjct: 65 LISGIAHGHRKSRHQPDHNEY 3
Score = 87.2 bits (184), Expect(3) = 1e-023
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -1 / -3
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKP 109
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P
Sbjct: 129 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP 13
Score = 40.5 bits (82), Expect(3) = 1e-023
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / -3
Query: 357 LEGDRYHPHGSSEMYSVTCL 298
L G YHPHG+S++YSVTCL
Sbjct: 261 LAGALYHPHGASDVYSVTCL 202
Score = 19.9 bits (37), Expect(2) = 9e-053
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +3 / +1
Query: 381 VCSIRINI 404
+CSIRIN+
Sbjct: 295 ICSIRINL 318
Score = 18.0 bits (33), Expect(3) = 1e-023
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3 / -1
Query: 400 FILMEQTKFHASLQL 356
FILMEQ + + QL
Sbjct: 314 FILMEQIQVLETAQL 270
>gb|CV064014.1|CV064014 BNEL96d4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL96d4 5' similar to betaine
aldehyde dehydrogenase, mRNA sequence
Length = 593
Score = 199 bits (428), Expect = 1e-050
Identities = 74/93 (79%), Positives = 81/93 (87%)
Frame = +2 / -2
Query: 77 EAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFG 256
E +DT YGLAGAVISGD ERCQRL+ EI AG IWVNCSQPCFCQAPWGGNKR+GFG
Sbjct: 514 EXASTGHDTHYGLAGAVISGDSERCQRLA*EIQAGCIWVNCSQPCFCQAPWGGNKRNGFG 335
Query: 257 RELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
RELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 334 RELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 236
Score = 104 bits (221), Expect = 5e-022
Identities = 47/81 (58%), Positives = 53/81 (65%)
Frame = -2 / +1
Query: 341 TIPTAHQRCTP*LA*RSGSYQCPLLQAHVQIHYACYRPREPGRSRAVSSLPR*FQHQSPQ 162
T P AHQ CTP A* SGSYQCPLL+A Q AC RP E GRS+ SS PR SP+
Sbjct: 250 TTPRAHQMCTPSPA*CSGSYQCPLLRALAQSRCACSRPTELGRSKVASSSPRCIPLGSPK 429
Query: 161 IISGSAHDHQKLQHQLNHTVY 99
+ISG AH H+K +HQ NH Y
Sbjct: 430 LISGIAHCHRKSRHQPNHNEY 492
>gb|BU990251.1|BU990251 HF24I09r HF Hordeum vulgare subsp. vulgare cDNA clone HF24I09
5-PRIME, mRNA sequence
Length = 599
Score = 198 bits (426), Expect = 3e-050
Identities = 77/82 (93%), Positives = 80/82 (97%)
Frame = +2 / +1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 352 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 531
Query: 185 IWVNCSQPCFCQAPWGGNKRSG 250
IWVNCSQPCFCQAPWGGNKRSG
Sbjct: 532 IWVNCSQPCFCQAPWGGNKRSG 597
Score = 119 bits (254), Expect = 1e-026
Identities = 51/74 (68%), Positives = 53/74 (71%)
Frame = -1 / -1
Query: 225 GAWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHR 46
GAWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THR
Sbjct: 572 GAWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHR 393
Query: 45 TGPKTSSLQISIDV 4
TGPKTSSLQISIDV
Sbjct: 392 TGPKTSSLQISIDV 351
Score = 117 bits (251), Expect = 3e-026
Identities = 49/78 (62%), Positives = 61/78 (78%)
Frame = -3 / -3
Query: 238 VTAPGSLAEAGL*AVYPDNSSINLLR*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKF 59
V P SLAEA L AV+PD S ++LL SLA+LT+T N+ TS TI+ I+GQF+GF+F KF
Sbjct: 585 VPTPRSLAEARLRAVHPDASRLDLLSQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKF 406
Query: 58 FNTQDWTEDFLPPNFH*C 5
+TQDWT+DFLPPN H*C
Sbjct: 405 LHTQDWTKDFLPPNLH*C 352
Score = 112 bits (240), Expect = 1e-024
Identities = 48/80 (60%), Positives = 56/80 (70%)
Frame = -2 / -2
Query: 242 ACYRPREPGRSRAVSSLPR*FQHQSPQIISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC* 63
AC P E GRS+A SS PR +SPQ ISG AH H+K +HQ +H Y WPV+WL L+
Sbjct: 589 ACSHPTELGRSKAASSSPRCIPPRSPQPISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*K 410
Query: 62 IL*HTGLDRRLPPSKFPLMC 3
I HTGLD+RLPPSK PLMC
Sbjct: 409 IPSHTGLDQRLPPSKSPLMC 350
>gb|BU995181.1|BU995181 HM09H12r HM Hordeum vulgare subsp. vulgare cDNA clone HM09H12
5-PRIME, mRNA sequence
Length = 454
Score = 188 bits (406), Expect = 1e-047
Identities = 69/78 (88%), Positives = 75/78 (96%)
Frame = +2 / +1
Query: 122 AVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVK 301
AVISGDRERCQRL+EEI+AG IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+K
Sbjct: 10 AVISGDRERCQRLAEEIEAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIK 189
Query: 302 QVTEYISDEPWGWYRSPS 355
QVTEY SD PWGWY++P+
Sbjct: 190 QVTEYTSDAPWGWYKAPA 243
>gb|CB881326.1|CB881326 HM09H12w HM Hordeum vulgare subsp. vulgare cDNA clone HM09H12
3-PRIME, mRNA sequence
Length = 463
Score = 188 bits (406), Expect = 1e-047
Identities = 69/78 (88%), Positives = 75/78 (96%)
Frame = +2 / -2
Query: 122 AVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVK 301
AVISGDRERCQRL+EEI+AG IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+K
Sbjct: 456 AVISGDRERCQRLAEEIEAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIK 277
Query: 302 QVTEYISDEPWGWYRSPS 355
QVTEY SD PWGWY++P+
Sbjct: 276 QVTEYTSDAPWGWYKAPA 223
>gb|CA000599.1|CA000599 HS07M01u HS Hordeum vulgare subsp. vulgare cDNA clone HS07M01
3-PRIME, mRNA sequence
Length = 512
Score = 174 bits (375), Expect = 3e-043
Identities = 67/93 (72%), Positives = 78/93 (83%)
Frame = +2 / -2
Query: 86 ELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGREL 265
ELANDT YGLAG VIS D ERC+R+++ I +GI+W+NCSQP QAPWGGNKRSGFGREL
Sbjct: 511 ELANDTHYGLAGGVISDDLERCERIAKVIHSGIVWINCSQPTLVQAPWGGNKRSGFGREL 332
Query: 266 GEGGIDNYLSVKQVTEYISDEPWGWYRSPSKL* 364
GE G++NYLSVKQVT Y DE +GWY+ PSKL*
Sbjct: 331 GEWGLENYLSVKQVTRYCKDELYGWYQRPSKL* 233
>gb|BU984894.1|BU984894 HF05G21r HF Hordeum vulgare subsp. vulgare cDNA clone HF05G21
5-PRIME, mRNA sequence
Length = 576
Score = 172 bits (370), Expect = 1e-042
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +2 / +3
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 357 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 536
Query: 185 IWVNCSQPCFCQA 223
IWVNCSQPCFCQA
Sbjct: 537 IWVNCSQPCFCQA 575
Score = 116 bits (248), Expect = 9e-026
Identities = 50/73 (68%), Positives = 52/73 (71%)
Frame = -1 / -3
Query: 222 AWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHRT 43
AWQKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THRT
Sbjct: 574 AWQKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHRT 395
Query: 42 GPKTSSLQISIDV 4
GPKTSSLQISIDV
Sbjct: 394 GPKTSSLQISIDV 356
Score = 114 bits (243), Expect = 4e-025
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = -3 / -2
Query: 223 SLAEAGL*AVYPDNSSINLLR*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQD 44
SLAEA L AV+PD S ++LL SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQD
Sbjct: 575 SLAEARLRAVHPDASRLDLLSQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQD 396
Query: 43 WTEDFLPPNFH*C 5
WT+DFLPPN H*C
Sbjct: 395 WTKDFLPPNLH*C 357
Score = 105 bits (223), Expect = 3e-022
Identities = 45/74 (60%), Positives = 53/74 (71%)
Frame = -2 / -1
Query: 224 EPGRSRAVSSLPR*FQHQSPQIISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTG 45
E GRS+A SS PR +SPQ ISG AH H+K +HQ +H Y WPV+WL L+ I HTG
Sbjct: 576 ELGRSKAASSSPRCIPPRSPQPISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTG 397
Query: 44 LDRRLPPSKFPLMC 3
LD+RLPPSK PLMC
Sbjct: 396 LDQRLPPSKSPLMC 355
>gb|BG415892.1|BG415892 HVSMEk0008M13f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0008M13f, mRNA sequence
Length = 699
Score = 171 bits (368), Expect = 3e-042
Identities = 61/70 (87%), Positives = 67/70 (95%)
Frame = +2 / +1
Query: 146 RCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISD 325
RCQRL+EEI+AG IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY SD
Sbjct: 1 RCQRLAEEIEAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSD 180
Query: 326 EPWGWYRSPS 355
PWGWY++P+
Sbjct: 181 APWGWYKAPA 210
>gb|BJ472041.1|BJ472041 BJ472041 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal31k21 5', mRNA sequence
Length = 387
Score = 166 bits (356), Expect = 1e-040
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2 / +2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGA ISGDRERCQRL+EEI+AG
Sbjct: 173 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAXISGDRERCQRLAEEIEAGC 352
Query: 185 IWVNCSQPCFC 217
IWVNCSQPCFC
Sbjct: 353 IWVNCSQPCFC 385
Score = 112 bits (239), Expect = 2e-024
Identities = 48/72 (66%), Positives = 50/72 (69%)
Frame = -1 / -1
Query: 219 WQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHRTG 40
WQKQGCEQFTQ+ PASISS NLW RSRSPEI APA+P THRTG
Sbjct: 387 WQKQGCEQFTQMHPASISSANLWHRSRSPEIXAPARP**VSLASSMASSSVENSFTHRTG 208
Query: 39 PKTSSLQISIDV 4
PKTSSLQISIDV
Sbjct: 207 PKTSSLQISIDV 172
Score = 109 bits (232), Expect = 1e-023
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = -3 / -3
Query: 217 AEAGL*AVYPDNSSINLLR*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWT 38
AEA L AV+PD S ++LL SLA+LT+T N TS TI+ I+GQF+GF+F KF +TQDWT
Sbjct: 385 AEARLRAVHPDASRLDLLSQSLASLTVTGNXGTSQTIMSIVGQFDGFLFGRKFLHTQDWT 206
Query: 37 EDFLPPNFH*C 5
+DFLPPN H*C
Sbjct: 205 KDFLPPNLH*C 173
Score = 104 bits (221), Expect = 5e-022
Identities = 44/72 (61%), Positives = 52/72 (72%)
Frame = -2 / -2
Query: 218 GRSRAVSSLPR*FQHQSPQIISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLD 39
GRS+A SS PR +SPQ ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD
Sbjct: 386 GRSKAASSSPRCIPPRSPQPISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLD 207
Query: 38 RRLPPSKFPLMC 3
+RLPPSK PLMC
Sbjct: 206 QRLPPSKSPLMC 171
>gb|BJ470674.1|BJ470674 BJ470674 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal25o04 5', mRNA sequence
Length = 426
Score = 164 bits (352), Expect = 4e-040
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = +2 / +2
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERCQRL+EEI+AG
Sbjct: 215 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCQRLAEEIEAGC 394
Query: 185 IWVNCSQPCF 214
IWVNCSQPCF
Sbjct: 395 IWVNCSQPCF 424
Score = 109 bits (233), Expect = 1e-023
Identities = 48/71 (67%), Positives = 50/71 (70%)
Frame = -1 / -1
Query: 216 QKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHRTGP 37
QKQGCEQFTQ+ PASISS NLW RSRSPEITAPA+P THRTGP
Sbjct: 426 QKQGCEQFTQMHPASISSANLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHRTGP 247
Query: 36 KTSSLQISIDV 4
KTSSLQISIDV
Sbjct: 246 KTSSLQISIDV 214
Score = 108 bits (231), Expect = 2e-023
Identities = 44/70 (62%), Positives = 56/70 (80%)
Frame = -3 / -3
Query: 214 EAGL*AVYPDNSSINLLR*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDWTE 35
EA L AV+PD S ++LL SLA+LT+T N+ TS TI+ I+GQF+GF+F KF +TQDWT+
Sbjct: 424 EARLRAVHPDASRLDLLSQSLASLTVTGNHGTSQTIMSIVGQFDGFLFGRKFLHTQDWTK 245
Query: 34 DFLPPNFH*C 5
DFLPPN H*C
Sbjct: 244 DFLPPNLH*C 215
Score = 101 bits (215), Expect = 3e-021
Identities = 43/71 (60%), Positives = 51/71 (71%)
Frame = -2 / -2
Query: 215 RSRAVSSLPR*FQHQSPQIISGSAHDHQKLQHQLNHTVYHWPVQWLHLQC*IL*HTGLDR 36
RS+A SS PR +SPQ ISG AH H+K +HQ +H Y WPV+WL L+ I HTGLD+
Sbjct: 425 RSKAASSSPRCIPPRSPQPISGIAHGHRKSRHQPDHNEYRWPVRWLPLR*KIPSHTGLDQ 246
Query: 35 RLPPSKFPLMC 3
RLPPSK PLMC
Sbjct: 245 RLPPSKSPLMC 213
>gb|BE060881.2|BE060881 HVSMEg0013L09f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0013L09f, mRNA sequence
Length = 696
Score = 163 bits (351), Expect = 6e-040
Identities = 66/82 (80%), Positives = 72/82 (87%)
Frame = +2 / +1
Query: 5 TSMEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGI 184
TSMEIWREEVFGPVLCVKEFSTE+EAIELANDT YGLAGAVISGDRERC R +EEI++G
Sbjct: 211 TSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGDRERCHRFTEEIESGC 390
Query: 185 IWVNCSQPCFCQAPWGGNKRSG 250
IWVN SQPCF QA GG + +G
Sbjct: 391 IWVNWSQPCFWQASVGGEQSAG 456
Score = 103 bits (220), Expect = 7e-022
Identities = 42/72 (58%), Positives = 55/72 (76%)
Frame = -3 / -1
Query: 220 LAEAGL*AVYPDNSSINLLR*SLAALTITRNYSTS*TILCIIGQFNGFIFSAKFFNTQDW 41
L +A L V+P+ S +LL S+A+LT+T N+ TS TI+ I+GQFNGF+F KF +TQDW
Sbjct: 426 LPKARLRPVHPNASRFDLLSKSVASLTVTGNHGTSQTIMSIVGQFNGFLFGRKFLHTQDW 247
Query: 40 TEDFLPPNFH*C 5
T+DFLPPN H*C
Sbjct: 246 TKDFLPPNLH*C 211
Score = 100 bits (212), Expect = 8e-021
Identities = 46/73 (63%), Positives = 49/73 (67%)
Frame = -1 / -2
Query: 222 AWQKQGCEQFTQIIPASISSDNLWQRSRSPEITAPAKPYCXXXXXXXXXXXXXXXLTHRT 43
A QKQG +QFTQ+ P SISS NLW RSRSPEITAPA+P THRT
Sbjct: 428 ACQKQG*DQFTQMHPDSISSVNLWHRSRSPEITAPARP**VSLASSMASSSVENSFTHRT 249
Query: 42 GPKTSSLQISIDV 4
GPKTSSLQISIDV
Sbjct: 248 GPKTSSLQISIDV 210
>gb|BM817302.1|BM817302 HC105A10_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC105A10_T3.ab1 similar to Glyceraldehyde-3-phosphate
dehydrogenase (NADP ),Benzaldehyde dehydrogenase (NAD ),
mRNA sequence
Length = 946
Score = 160 bits (345), Expect = 4e-039
Identities = 61/86 (70%), Positives = 72/86 (83%)
Frame = +2 / +2
Query: 107 YGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDN 286
YGLAG VIS D ERC+R+++ I +GI+W+NCSQP QAPWGGNKRSGFGRELGE G++N
Sbjct: 32 YGLAGGVISDDLERCERIAKVIHSGIVWINCSQPTLVQAPWGGNKRSGFGRELGEWGLEN 211
Query: 287 YLSVKQVTEYISDEPWGWYRSPSKL* 364
YLSVKQVT Y DE +GWY+ PSKL*
Sbjct: 212 YLSVKQVTRYCKDELYGWYQRPSKL* 289
>gb|BQ663294.1|BQ663294 HU02A14u HU Hordeum vulgare subsp. vulgare cDNA clone HU02A14
3-PRIME, mRNA sequence
Length = 400
Score = 153 bits (328), Expect(2) = 7e-037
Identities = 54/63 (85%), Positives = 59/63 (93%)
Frame = +2 / -1
Query: 167 EIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYR 346
EI+AG IWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS+KQVTEY D PWGWY+
Sbjct: 400 EIEAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTFDAPWGWYK 221
Query: 347 SPS 355
+P+
Sbjct: 220 APA 212
Score = 19.9 bits (37), Expect(2) = 7e-037
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +3 / -3
Query: 381 VCSIRINI 404
+CSIRIN+
Sbjct: 176 ICSIRINL 153
>gb|BQ763641.1|BQ763641 EBro03_SQ005_C06_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_C06 5', mRNA sequence
Length = 507
Score = 150 bits (322), Expect = 6e-036
Identities = 57/83 (68%), Positives = 68/83 (81%)
Frame = +2 / +2
Query: 116 AGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLS 295
A VIS D ERC+R+++ I +GI+W+NCSQP QAPWGGNKRSGFGRELGE G++NYLS
Sbjct: 17 ASGVISDDLERCERIAKVIHSGIVWINCSQPTLVQAPWGGNKRSGFGRELGEWGLENYLS 196
Query: 296 VKQVTEYISDEPWGWYRSPSKL* 364
VKQVT Y DE +GWY+ PSKL*
Sbjct: 197 VKQVTRYCKDELYGWYQRPSKL* 265
>gb|BM370947.2|BM370947 EBro04_SQ003_A05_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_A05 5', mRNA sequence
Length = 156
Score = 125 bits (268), Expect = 2e-028
Identities = 47/51 (92%), Positives = 49/51 (96%)
Frame = +2 / +3
Query: 86 ELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIWVNCSQPCFCQAPWGGN 238
ELANDT YGLAGAVISGDRERCQRL+EEI+AG IWVNCSQPCFCQAPWGGN
Sbjct: 3 ELANDTHYGLAGAVISGDRERCQRLAEEIEAGCIWVNCSQPCFCQAPWGGN 155
>gb|CA005501.1|CA005501 HU10B24u HU Hordeum vulgare subsp. vulgare cDNA clone HU10B24
3-PRIME, mRNA sequence
Length = 347
Score = 117 bits (250), Expect(2) = 2e-026
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = +2 / -2
Query: 212 FCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPWGWYRSPS 355
FCQAPWGGNK SGFGRELGEGGIDNYLS+KQVTEY SD PWGWY++P+
Sbjct: 346 FCQAPWGGNKHSGFGRELGEGGIDNYLSIKQVTEYTSDAPWGWYKAPA 203
Score = 19.9 bits (37), Expect(2) = 2e-026
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +3 / -1
Query: 381 VCSIRINI 404
+CSIRIN+
Sbjct: 167 ICSIRINL 144
>gb|AV917894.1|AV917894 AV917894 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11p17 3', mRNA sequence
Length = 614
Score = 111 bits (238), Expect = 2e-024
Identities = 43/108 (39%), Positives = 67/108 (62%)
Frame = +2 / -2
Query: 11 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIW 190
M I +EE+FGPV+ + +F T +E I+ AN T+YGLA V++ + + +S + +G++W
Sbjct: 397 MSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVW 218
Query: 191 VNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
VNC AP+GG K SGFG+++G +D YL K V + + PW
Sbjct: 217 VNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 74
>gb|AV929175.1|AV929175 AV929175 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd11e16 3', mRNA sequence
Length = 636
Score = 111 bits (238), Expect = 2e-024
Identities = 43/108 (39%), Positives = 67/108 (62%)
Frame = +2 / -3
Query: 11 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIW 190
M I +EE+FGPV+ + +F T +E I+ AN T+YGLA V++ + + +S + +G++W
Sbjct: 454 MSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVW 275
Query: 191 VNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
VNC AP+GG K SGFG+++G +D YL K V + + PW
Sbjct: 274 VNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 131
>gb|BJ448569.1|BJ448569 BJ448569 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak20g24 5', mRNA sequence
Length = 670
Score = 111 bits (238), Expect = 2e-024
Identities = 43/108 (39%), Positives = 67/108 (62%)
Frame = +2 / +2
Query: 11 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIW 190
M I +EE+FGPV+ + +F T +E I+ AN T+YGLA V++ + + +S + +G++W
Sbjct: 311 MSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVW 490
Query: 191 VNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
VNC AP+GG K SGFG+++G +D YL K V + + PW
Sbjct: 491 VNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 634
>gb|BJ456291.1|BJ456291 BJ456291 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak20g24 3', mRNA sequence
Length = 706
Score = 111 bits (238), Expect = 2e-024
Identities = 43/108 (39%), Positives = 67/108 (62%)
Frame = +2 / -3
Query: 11 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIW 190
M I +EE+FGPV+ + +F T +E I+ AN T+YGLA V++ + + +S + +G++W
Sbjct: 395 MSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVW 216
Query: 191 VNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
VNC AP+GG K SGFG+++G +D YL K V + + PW
Sbjct: 215 VNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 72
>gb|BQ464230.1|BQ464230 HF01L06T HF Hordeum vulgare subsp. vulgare cDNA clone HF01L06
5-PRIME, mRNA sequence
Length = 511
Score = 111 bits (238), Expect = 2e-024
Identities = 43/108 (39%), Positives = 67/108 (62%)
Frame = +2 / +3
Query: 11 MEIWREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGIIW 190
M I +EE+FGPV+ + +F T +E I+ AN T+YGLA V++ + + +S + +G++W
Sbjct: 69 MSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVW 248
Query: 191 VNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSVKQVTEYISDEPW 334
VNC AP+GG K SGFG+++G +D YL K V + + PW
Sbjct: 249 VNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPW 392
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 243,127,392
Number of Sequences: 312970
Number of extensions: 3295944
Number of successful extensions: 53770
Number of sequences better than 1.0e-020: 96
length of database: 58,378,179
effective HSP length: 50
effective length of database: 42,729,679
effective search space used: 5426669233
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)