TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204472.2.1
(757 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG309440.1|BG309440 HVSMEc0010E08f Hordeum vulgare seedl... 341 5e-098
gb|BG300583.1|BG300583 HVSMEb0017J11f Hordeum vulgare seedl... 339 7e-098
gb|BG310036.1|BG310036 HVSMEc0016C04f Hordeum vulgare seedl... 339 7e-098
gb|BF627738.2|BF627738 HVSMEb0005K17f Hordeum vulgare seedl... 339 1e-097
emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotra... 339 5e-097
gb|BG300865.1|BG300865 HVSMEb0018L19f Hordeum vulgare seedl... 339 7e-097
gb|AL450913.1|AL450913 AL450913 Hordeum vulgare Barke etiol... 336 1e-095
gb|BF626739.2|BF626739 HVSMEb0001D16f Hordeum vulgare seedl... 347 3e-095
gb|BF631278.2|BF631278 HVSMEb0015H17f Hordeum vulgare seedl... 330 1e-094
gb|BM370804.2|BM370804 EBro04_SQ002_F05_R root, 3 week, sal... 330 3e-094
gb|BQ764817.1|BQ764817 EBca01_SQ005_A06_R carpel, pre-anthe... 332 2e-090
gb|BE195774.3|BE195774 HVSMEh0090G19f Hordeum vulgare 5-45 ... 315 4e-088
emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotra... 299 6e-086
gb|BF260656.2|BF260656 HVSMEf0022J12f Hordeum vulgare seedl... 299 7e-086
gb|CA020574.1|CA020574 HZ36L09r HZ Hordeum vulgare subsp. v... 314 3e-085
gb|BQ462941.1|BQ462941 HI02H24r HI Hordeum vulgare subsp. v... 314 5e-085
gb|BQ764772.1|BQ764772 EBca01_SQ004_H24_R carpel, pre-anthe... 314 5e-085
gb|BQ759958.1|BQ759958 EBpi05_SQ004_P23_R pistil, 8 DPA, no... 312 2e-084
gb|AL500460.1|AL500460 AL500460 Hordeum vulgare Barke etiol... 288 9e-083
gb|BU997613.1|BU997613 HI08H24r HI Hordeum vulgare subsp. v... 306 1e-082
gb|BE455947.3|BE455947 HVSMEg0017N10f Hordeum vulgare pre-a... 289 6e-082
gb|BQ467526.1|BQ467526 HS04B01r HS Hordeum vulgare subsp. v... 300 2e-081
gb|AL450643.1|AL450643 AL450643 Hordeum vulgare Barke etiol... 301 4e-081
gb|BF629221.2|BF629221 HVSMEb0010F24f Hordeum vulgare seedl... 301 4e-081
gb|BF618579.2|BF618579 HVSMEc0006G01f Hordeum vulgare seedl... 283 3e-080
gb|BF628380.2|BF628380 HVSMEb0003O02f Hordeum vulgare seedl... 297 6e-080
gb|CA024504.1|CA024504 HZ49H21r HZ Hordeum vulgare subsp. v... 296 1e-079
gb|AL500129.1|AL500129 AL500129 Hordeum vulgare Barke etiol... 277 2e-078
gb|BF260946.2|BF260946 HVSMEf0023F18f Hordeum vulgare seedl... 287 4e-078
gb|BE060552.2|BE060552 HVSMEg0012J20f Hordeum vulgare pre-a... 290 5e-078
gb|BI960618.1|BI960618 HVSMEn0025G09f Hordeum vulgare rachi... 286 9e-077
gb|BU997685.1|BU997685 HI08L09r HI Hordeum vulgare subsp. v... 286 9e-077
gb|BF629930.2|BF629930 HVSMEb0007F19f Hordeum vulgare seedl... 285 2e-076
gb|BI960420.1|BI960420 HVSMEn0024I16f Hordeum vulgare rachi... 210 2e-076
gb|BI958106.1|BI958106 HVSMEn0013G22f Hordeum vulgare rachi... 264 1e-074
gb|BF267606.1|BF267606 HV_CEa0018G10f Hordeum vulgare seedl... 277 4e-074
gb|BG309764.2|BG309764 HVSMEc0012H20f Hordeum vulgare seedl... 220 2e-073
gb|BI957177.1|BI957177 HVSMEn0007P14f Hordeum vulgare rachi... 272 1e-072
gb|BF624089.2|BF624089 HVSMEa0009G06f Hordeum vulgare seedl... 270 5e-072
gb|BQ467998.1|BQ467998 HR01J18r HR Hordeum vulgare subsp. v... 270 5e-072
gb|BU997928.1|BU997928 HI09H06r HI Hordeum vulgare subsp. v... 270 5e-072
gb|BF627004.2|BF627004 HVSMEb0001P03f Hordeum vulgare seedl... 270 9e-072
gb|BQ460689.1|BQ460689 HA06D17r HA Hordeum vulgare subsp. v... 267 6e-071
gb|BF618456.2|BF618456 HVSMEc0005L21f Hordeum vulgare seedl... 235 6e-071
gb|BE216242.1|BE216242 HV_CEb0009P07f Hordeum vulgare seedl... 265 2e-070
gb|CA019178.1|CA019178 HV11B18r HV Hordeum vulgare subsp. v... 264 3e-070
gb|AL500052.1|AL500052 AL500052 Hordeum vulgare Barke etiol... 153 4e-070
gb|CA007079.1|CA007079 HU06K21r HU Hordeum vulgare subsp. v... 263 1e-069
gb|BI778475.2|BI778475 EBro07_SQ003_G13_R root, 3 week, red... 235 1e-066
gb|BF627685.3|BF627685 HVSMEb0005I10f Hordeum vulgare seedl... 252 2e-066
gb|BI953155.1|BI953155 HVSMEm0011G01f Hordeum vulgare green... 248 3e-065
gb|BF627541.2|BF627541 HVSMEb0005C03f Hordeum vulgare seedl... 246 1e-064
gb|BI954358.1|BI954358 HVSMEm0017G17f Hordeum vulgare green... 245 2e-064
gb|CB877507.1|CB877507 HP05D02T HP Hordeum vulgare subsp. v... 226 3e-064
gb|CA027653.1|CA027653 HZ59J16r HZ Hordeum vulgare subsp. v... 242 2e-063
gb|AL500119.1|AL500119 AL500119 Hordeum vulgare Barke etiol... 226 3e-063
gb|BQ462594.1|BQ462594 HI01G12T HI Hordeum vulgare subsp. v... 237 7e-062
gb|AW982755.3|AW982755 HVSMEg0004C03f Hordeum vulgare pre-a... 218 9e-062
gb|BF620035.2|BF620035 HVSMEc0011F01f Hordeum vulgare seedl... 233 7e-061
gb|BQ461043.1|BQ461043 HE01F23r HE Hordeum vulgare subsp. v... 227 6e-059
gb|AL503674.1|AL503674 AL503674 Hordeum vulgare Barke roots... 211 7e-059
gb|BF618504.2|BF618504 HVSMEc0005O01f Hordeum vulgare seedl... 220 1e-058
gb|CA027287.1|CA027287 HZ58H04r HZ Hordeum vulgare subsp. v... 219 1e-056
emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan tr... 203 3e-056
gb|BM816264.1|BM816264 HB01H02_T3.ab1 HB Hordeum vulgare su... 203 3e-056
gb|CA003718.1|CA003718 HS15F14r HS Hordeum vulgare subsp. v... 216 9e-056
gb|BF622776.2|BF622776 HVSMEa0008K20f Hordeum vulgare seedl... 200 3e-055
gb|BQ467575.1|BQ467575 HS04D13r HS Hordeum vulgare subsp. v... 214 6e-055
gb|BQ662128.1|BQ662128 HR01K20u HR Hordeum vulgare subsp. v... 214 6e-055
gb|CA003908.1|CA003908 HS15O19r HS Hordeum vulgare subsp. v... 214 6e-055
gb|CB877582.1|CB877582 HP05H06T HP Hordeum vulgare subsp. v... 204 1e-053
gb|CA023472.1|CA023472 HZ46F16r HZ Hordeum vulgare subsp. v... 204 3e-052
gb|BI780996.2|BI780996 EBma03_SQ001_B17_R maternal, 8 DPA, ... 203 9e-052
gb|AL450708.1|AL450708 AL450708 Hordeum vulgare Barke etiol... 201 3e-051
gb|BG368127.1|BG368127 HVSMEi0015M23f Hordeum vulgare 20 DA... 132 8e-051
gb|BI959592.1|BI959592 HVSMEn0020F05f Hordeum vulgare rachi... 199 1e-050
gb|BF628305.2|BF628305 HVSMEb0003K21f Hordeum vulgare seedl... 199 2e-050
gb|BF631401.2|BF631401 HVSMEb0015N09f Hordeum vulgare seedl... 134 2e-049
gb|CA001720.1|CA001720 HS05G04r HS Hordeum vulgare subsp. v... 194 4e-049
gb|CA031564.1|CA031564 HX10H03r HX Hordeum vulgare subsp. v... 193 9e-049
gb|CB883507.1|CB883507 HQ02H12w HQ Hordeum vulgare subsp. v... 193 9e-049
gb|BQ462553.1|BQ462553 HI01E04T HI Hordeum vulgare subsp. v... 173 1e-048
gb|BE194552.3|BE194552 HVSMEh0085P21f Hordeum vulgare 5-45 ... 188 3e-048
gb|BU998122.1|BU998122 HI10B03r HI Hordeum vulgare subsp. v... 191 5e-048
gb|BF629710.1|BF629710 HVSMEb0013D21f Hordeum vulgare seedl... 171 1e-047
gb|BQ465021.1|BQ465021 HU02G22r HU Hordeum vulgare subsp. v... 122 5e-047
gb|BQ460892.1|BQ460892 HE01O03r HE Hordeum vulgare subsp. v... 186 2e-046
gb|BI956177.1|BI956177 HVSMEm0025O16f Hordeum vulgare green... 184 4e-046
gb|BG343074.1|BG343074 HVSMEg0001P08f Hordeum vulgare pre-a... 182 2e-045
gb|BF620985.1|BF620985 HVSMEa0003D18f Hordeum vulgare seedl... 128 2e-045
emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotr... 127 6e-045
gb|CA008408.1|CA008408 HU10N24r HU Hordeum vulgare subsp. v... 127 6e-045
gb|BE194548.2|BE194548 HVSMEh0085P11f Hordeum vulgare 5-45 ... 179 2e-044
emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotra... 138 3e-044
gb|BF631048.2|BF631048 HVSMEb0014N08f Hordeum vulgare seedl... 138 3e-044
gb|BF631110.2|BF631110 HVSMEb0015A04f Hordeum vulgare seedl... 138 3e-044
gb|BF630403.2|BF630403 HVSMEb0009B18f Hordeum vulgare seedl... 138 3e-044
gb|AV922899.1|AV922899 AV922899 K. Sato unpublished cDNA li... 138 3e-044
gb|AV927108.1|AV927108 AV927108 K. Sato unpublished cDNA li... 138 3e-044
gb|BI778147.2|BI778147 EBro07_SQ002_F18_R root, 3 week, red... 138 3e-044
gb|BJ463118.1|BJ463118 BJ463118 K. Sato unpublished cDNA li... 138 3e-044
gb|AV916008.1|AV916008 AV916008 K. Sato unpublished cDNA li... 125 3e-044
gb|BF630623.2|BF630623 HVSMEb0012E18f Hordeum vulgare seedl... 136 1e-043
gb|BF263162.2|BF263162 HV_CEa0006A01f Hordeum vulgare seedl... 136 1e-043
gb|BF618866.2|BF618866 HVSMEc0008D05f Hordeum vulgare seedl... 135 1e-043
gb|AV924203.1|AV924203 AV924203 K. Sato unpublished cDNA li... 135 1e-043
gb|BG301313.2|BG301313 HVSMEb0020K16f Hordeum vulgare seedl... 133 5e-043
gb|BF620863.2|BF620863 HVSMEa0003F12f Hordeum vulgare seedl... 174 6e-043
gb|BQ471752.1|BQ471752 HV03F21r HV Hordeum vulgare subsp. v... 158 1e-042
gb|CA029613.1|CA029613 HZ65L12r HZ Hordeum vulgare subsp. v... 173 1e-042
gb|BI958669.1|BI958669 HVSMEn0016C05f Hordeum vulgare rachi... 124 5e-042
gb|BM369898.2|BM369898 EBem07_SQ004_O19_R embryo, 28 DPA, n... 171 5e-042
gb|CA030559.1|CA030559 HX07G17r HX Hordeum vulgare subsp. v... 126 9e-042
gb|CA023198.1|CA023198 HZ45I10r HZ Hordeum vulgare subsp. v... 126 2e-041
gb|BM816097.1|BM816097 HC111H09_T3.ab1 HC Hordeum vulgare s... 94 3e-041
gb|BG309189.1|BG309189 HVSMEc0004M02f Hordeum vulgare seedl... 163 6e-041
gb|CA026923.1|CA026923 HZ57F20r HZ Hordeum vulgare subsp. v... 164 1e-040
gb|BF620598.2|BF620598 HVSMEc0020F14f Hordeum vulgare seedl... 118 2e-040
gb|BI958667.1|BI958667 HVSMEn0016C03f Hordeum vulgare rachi... 110 1e-039
gb|BQ462489.1|BQ462489 HI01A16T HI Hordeum vulgare subsp. v... 161 4e-039
gb|CA022401.1|CA022401 HZ43A12r HZ Hordeum vulgare subsp. v... 161 4e-039
gb|BF629579.2|BF629579 HVSMEb0013G15f Hordeum vulgare seedl... 159 2e-038
gb|BQ463558.1|BQ463558 HI05L07r HI Hordeum vulgare subsp. v... 157 5e-038
gb|BQ763770.1|BQ763770 EBro03_SQ005_J09_R root, 3 week, wat... 116 6e-038
gb|BF629934.2|BF629934 HVSMEb0007F23f Hordeum vulgare seedl... 104 2e-037
gb|BF256171.2|BF256171 HVSMEf0008P16f Hordeum vulgare seedl... 110 5e-037
gb|BQ760822.1|BQ760822 EBro03_SQ003_J06_R root, 3 week, wat... 116 7e-036
gb|BF623367.2|BF623367 HVSMEa0015K08f Hordeum vulgare seedl... 68 1e-035
gb|BQ468552.1|BQ468552 HM01J07T HM Hordeum vulgare subsp. v... 130 2e-035
gb|BI777946.1|BI777946 EBro07_SQ001_H07_R root, 3 week, red... 143 2e-035
gb|BQ767749.1|BQ767749 EBro08_SQ009_B20_R root, 3 week, dro... 74 6e-035
gb|BF617914.1|BF617914 HVSMEc0002H15f Hordeum vulgare seedl... 127 1e-034
gb|BQ470477.1|BQ470477 HX03B16r HX Hordeum vulgare subsp. v... 146 1e-034
gb|BM816111.1|BM816111 HC113E12_SK.ab1 HC Hordeum vulgare s... 108 1e-034
gb|BG300161.1|BG300161 HVSMEb0010K02f Hordeum vulgare seedl... 103 7e-034
gb|BI959766.1|BI959766 HVSMEn0021F17f Hordeum vulgare rachi... 105 2e-033
gb|BI956578.1|BI956578 HVSMEn0004D19f Hordeum vulgare rachi... 65 3e-033
gb|BI959504.1|BI959504 HVSMEn0019O24f Hordeum vulgare rachi... 134 9e-033
gb|BF618271.2|BF618271 HVSMEc0005D16f Hordeum vulgare seedl... 100 2e-032
gb|BQ762342.1|BQ762342 EBro01_SQ005_F13_R root, 3 week, hyd... 66 2e-031
gb|BI956298.1|BI956298 HVSMEn0002B22f Hordeum vulgare rachi... 128 3e-031
gb|AW982395.1|AW982395 HVSMEg0003C13f Hordeum vulgare pre-a... 132 2e-030
gb|BQ459051.1|BQ459051 HA02H07r HA Hordeum vulgare subsp. v... 68 3e-029
gb|AL500197.1|AL500197 AL500197 Hordeum vulgare Barke etiol... 110 8e-029
gb|BF622057.1|BF622057 HVSMEa0001K09f Hordeum vulgare seedl... 116 5e-028
gb|BJ446906.1|BJ446906 BJ446906 K. Sato unpublished cDNA li... 122 3e-027
gb|BJ447562.1|BJ447562 BJ447562 K. Sato unpublished cDNA li... 122 3e-027
gb|BF629241.2|BF629241 HVSMEb0010H14f Hordeum vulgare seedl... 121 4e-027
gb|BM444292.1|BM444292 EBem09_SQ004_L15_R embryo, 1 Day ger... 121 4e-027
gb|AV925293.1|AV925293 AV925293 K. Sato unpublished cDNA li... 79 2e-026
gb|BQ460993.1|BQ460993 HE01I24r HE Hordeum vulgare subsp. v... 79 2e-026
gb|CA029997.1|CA029997 HX05M19r HX Hordeum vulgare subsp. v... 62 3e-026
gb|BI956709.1|BI956709 HVSMEn0004O06f Hordeum vulgare rachi... 113 1e-025
gb|BG309526.2|BG309526 HVSMEc0010M24f Hordeum vulgare seedl... 65 3e-025
gb|CA028069.1|CA028069 HZ60O07r HZ Hordeum vulgare subsp. v... 114 5e-025
gb|CA031859.1|CA031859 HX11F08r HX Hordeum vulgare subsp. v... 62 1e-024
gb|BU971950.1|BU971950 HB20C15r BC Hordeum vulgare subsp. v... 73 2e-024
gb|BU995418.1|BU995418 HM10D05r HM Hordeum vulgare subsp. v... 60 2e-024
gb|AV914496.1|AV914496 AV914496 K. Sato unpublished cDNA li... 111 5e-024
gb|CA031894.1|CA031894 HX11G24r HX Hordeum vulgare subsp. v... 55 5e-024
gb|BM377806.2|BM377806 EBem04_SQ004_D21_R embryo, 12 DPA, n... 55 5e-024
gb|BF256789.2|BF256789 HVSMEf0011A08f Hordeum vulgare seedl... 103 1e-023
gb|CA021189.1|CA021189 HZ39G03r HZ Hordeum vulgare subsp. v... 109 2e-023
gb|BM100605.2|BM100605 EBma01_SQ005_L10_R maternal, 4 DPA, ... 92 4e-023
gb|AL450919.1|AL450919 AL450919 Hordeum vulgare Barke etiol... 54 1e-022
gb|AL450722.1|AL450722 AL450722 Hordeum vulgare Barke etiol... 106 2e-022
gb|BE454828.3|BE454828 HVSMEh0095D10f Hordeum vulgare 5-45 ... 68 4e-022
>gb|BG309440.1|BG309440 HVSMEc0010E08f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0010E08f, mRNA sequence
Length = 788
Score = 341 bits (738), Expect(2) = 5e-098
Identities = 133/157 (84%), Positives = 146/157 (92%)
Frame = -2 / +1
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA SLD+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 85 AAASLDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 264
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 265 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 444
Query: 210 FHTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPR 100
FHTYSILWNPKH+IFMVDDM IRDF NLE K +AFP+
Sbjct: 445 FHTYSILWNPKHIIFMVDDMPIRDFKNLEGKGIAFPK 555
Score = 140 bits (301), Expect(3) = 1e-041
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -1
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 386 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 207
Query: 449 DWNPE 463
DWNPE
Sbjct: 206 DWNPE 192
Score = 61.6 bits (128), Expect(5) = 9e-027
Identities = 27/41 (65%), Positives = 27/41 (65%)
Frame = -3 / +2
Query: 569 RRAAWTRSWTSRGATGGARSLTTGGC*RCRWTARPAPGSSP 447
RR AWTRS T G TG ARS TT *R WT PAPGSSP
Sbjct: 86 RRQAWTRSSTLPGVTGAARSSTTASS*RWDWTRSPAPGSSP 208
Score = 52.4 bits (108), Expect(5) = 9e-027
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -1 / +3
Query: 187 EPQARHLHGGRHAHQGLXQPGEQGGCVPK 101
EP+A HLHGGRHA QGL +PG +G VP+
Sbjct: 468 EPKAHHLHGGRHADQGLQEPGGEGDRVPQ 554
Score = 37.3 bits (75), Expect(2) = 5e-098
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1 / +1
Query: 121 QGGCVPKSQXMXLYSSXLNADDWXXRAG 38
+G PK+Q M LYS+ NADDW + G
Sbjct: 535 KGIAFPKNQPMRLYSNLWNADDWATQGG 618
Score = 37.3 bits (75), Expect(3) = 1e-041
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -1
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 479 CFGFQRME*VWKSLVG 432
Score = 30.4 bits (60), Expect(5) = 9e-027
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -1 / +3
Query: 364 PVVAGXXXXXXXXRVPGQRVRRAL 293
PVVAG RVPGQR RRAL
Sbjct: 291 PVVAGADARRDRLRVPGQRHRRAL 362
Score = 30.4 bits (60), Expect(3) = 1e-041
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / -1
Query: 39 PALXXQSSAFNXLE*SXIXWLLG 107
P QSSAF LE*S + W LG
Sbjct: 617 PPCVAQSSAFQRLE*SRMGWFLG 549
Score = 29.0 bits (57), Expect(5) = 9e-027
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / +3
Query: 104 QEPADAALLQXVERGRL 54
QEPA AALLQ +ER RL
Sbjct: 552 QEPAHAALLQPLERRRL 602
Score = 21.7 bits (41), Expect(5) = 9e-027
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3 / +2
Query: 305 PASPTRC 285
PASPTRC
Sbjct: 350 PASPTRC 370
>gb|BG300583.1|BG300583 HVSMEb0017J11f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017J11f, mRNA sequence
Length = 876
Score = 339 bits (734), Expect(2) = 7e-098
Identities = 132/157 (84%), Positives = 145/157 (92%)
Frame = -2 / +1
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 97 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 276
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 277 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 456
Query: 210 FHTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPR 100
FHTYSILWNPKH+IFMVDDM IRDF NLE K +AFP+
Sbjct: 457 FHTYSILWNPKHIIFMVDDMPIRDFKNLEGKGIAFPK 567
Score = 140 bits (301), Expect(3) = 1e-041
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -2
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 398 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 219
Query: 449 DWNPE 463
DWNPE
Sbjct: 218 DWNPE 204
Score = 55.1 bits (114), Expect(5) = 1e-024
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -3 / +2
Query: 569 RRAAWTRSWTSRGATGGARSLTTGGC*RCRWTARPAPGSSP 447
RR A TRS T G TG ARS TT *R WT PAPGSSP
Sbjct: 98 RRRASTRSSTLPGVTGAARSSTTASS*RWDWTRSPAPGSSP 220
Score = 52.4 bits (108), Expect(5) = 1e-024
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -1 / +3
Query: 187 EPQARHLHGGRHAHQGLXQPGEQGGCVPK 101
EP+A HLHGGRHA QGL +PG +G VP+
Sbjct: 480 EPKAHHLHGGRHADQGLQEPGGEGDRVPQ 566
Score = 38.6 bits (78), Expect(2) = 7e-098
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -1 / +1
Query: 121 QGGCVPKSQXMXLYSSXLNADDWXXRAG 38
+G PK+Q M LYSS NADDW + G
Sbjct: 547 KGIAFPKNQPMRLYSSLWNADDWATQGG 630
Score = 37.3 bits (75), Expect(3) = 1e-041
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 491 CFGFQRME*VWKSLVG 444
Score = 30.4 bits (60), Expect(5) = 1e-024
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -1 / +3
Query: 364 PVVAGXXXXXXXXRVPGQRVRRAL 293
PVVAG RVPGQR RRAL
Sbjct: 303 PVVAGADARRDRLRVPGQRHRRAL 374
Score = 30.4 bits (60), Expect(3) = 1e-041
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / -2
Query: 39 PALXXQSSAFNXLE*SXIXWLLG 107
P QSSAF LE*S + W LG
Sbjct: 629 PPCVAQSSAFQRLE*SRMGWFLG 561
Score = 29.0 bits (57), Expect(5) = 1e-024
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / +3
Query: 104 QEPADAALLQXVERGRL 54
QEPA AALLQ +ER RL
Sbjct: 564 QEPAHAALLQPLERRRL 614
Score = 21.7 bits (41), Expect(5) = 1e-024
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3 / +2
Query: 305 PASPTRC 285
PASPTRC
Sbjct: 362 PASPTRC 382
>gb|BG310036.1|BG310036 HVSMEc0016C04f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016C04f, mRNA sequence
Length = 831
Score = 339 bits (734), Expect(2) = 7e-098
Identities = 132/157 (84%), Positives = 145/157 (92%)
Frame = -2 / +1
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 94 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 273
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 274 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 453
Query: 210 FHTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPR 100
FHTYSILWNPKH+IFMVDDM IRDF NLE K +AFP+
Sbjct: 454 FHTYSILWNPKHIIFMVDDMPIRDFKNLEGKGIAFPK 564
Score = 140 bits (301), Expect(3) = 1e-041
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -2
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 395 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 216
Query: 449 DWNPE 463
DWNPE
Sbjct: 215 DWNPE 201
Score = 55.1 bits (114), Expect(5) = 8e-025
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -3 / +2
Query: 569 RRAAWTRSWTSRGATGGARSLTTGGC*RCRWTARPAPGSSP 447
RR A TRS T G TG ARS TT *R WT PAPGSSP
Sbjct: 95 RRRASTRSSTLPGVTGAARSSTTASS*RWDWTRSPAPGSSP 217
Score = 52.4 bits (108), Expect(5) = 8e-025
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -1 / +3
Query: 187 EPQARHLHGGRHAHQGLXQPGEQGGCVPK 101
EP+A HLHGGRHA QGL +PG +G VP+
Sbjct: 477 EPKAHHLHGGRHADQGLQEPGGEGDRVPQ 563
Score = 38.6 bits (78), Expect(2) = 7e-098
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -1 / +1
Query: 121 QGGCVPKSQXMXLYSSXLNADDWXXRAG 38
+G PK+Q M LYSS NADDW + G
Sbjct: 544 KGIAFPKNQPMRLYSSLWNADDWATQGG 627
Score = 37.3 bits (75), Expect(3) = 1e-041
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 488 CFGFQRME*VWKSLVG 441
Score = 30.4 bits (60), Expect(5) = 8e-025
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -1 / +3
Query: 364 PVVAGXXXXXXXXRVPGQRVRRAL 293
PVVAG RVPGQR RRAL
Sbjct: 300 PVVAGADARRDRLRVPGQRHRRAL 371
Score = 30.4 bits (60), Expect(3) = 1e-041
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / -2
Query: 39 PALXXQSSAFNXLE*SXIXWLLG 107
P QSSAF LE*S + W LG
Sbjct: 626 PPCVAQSSAFQRLE*SRMGWFLG 558
Score = 29.0 bits (57), Expect(5) = 8e-025
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / +3
Query: 104 QEPADAALLQXVERGRL 54
QEPA AALLQ +ER RL
Sbjct: 561 QEPAHAALLQPLERRRL 611
Score = 21.7 bits (41), Expect(5) = 8e-025
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3 / +2
Query: 305 PASPTRC 285
PASPTRC
Sbjct: 359 PASPTRC 379
>gb|BF627738.2|BF627738 HVSMEb0005K17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005K17f, mRNA sequence
Length = 831
Score = 339 bits (734), Expect(2) = 1e-097
Identities = 132/157 (84%), Positives = 145/157 (92%)
Frame = -2 / +2
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 104 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 283
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 284 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 463
Query: 210 FHTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPR 100
FHTYSILWNPKH+IFMVDDM IRDF NLE K +AFP+
Sbjct: 464 FHTYSILWNPKHIIFMVDDMPIRDFKNLEGKGIAFPK 574
Score = 140 bits (301), Expect(3) = 1e-041
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -1
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 405 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 226
Query: 449 DWNPE 463
DWNPE
Sbjct: 225 DWNPE 211
Score = 57.4 bits (119), Expect(5) = 9e-024
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -3 / +3
Query: 569 RRAAWTRSWTSRGATGGARSLTTGGC*RCRWTARPAPGSSP 447
RR A TRS T G TG ARS T C*R WT PAPGSSP
Sbjct: 105 RRRASTRSSTLPGVTGAARSSTMASC*RWAWTRSPAPGSSP 227
Score = 46.4 bits (95), Expect(5) = 9e-024
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -1 / +1
Query: 187 EPQARHLHGGRHAHQGLXQPGEQGGCVPK 101
EP+A HLHGG HA QGL +PG +G +P+
Sbjct: 487 EPKAHHLHGG*HADQGLQEPGGKGDRLPQ 573
Score = 38.2 bits (77), Expect(2) = 1e-097
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -1 / +2
Query: 121 QGGCVPKSQXMXLYSSXLNADDWXXRAG 38
+G PK+Q M LYSS NADDW G
Sbjct: 554 KGIAFPKNQPMRLYSSLWNADDWATHGG 637
Score = 37.3 bits (75), Expect(3) = 1e-041
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -1
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 498 CFGFQRME*VWKSLVG 451
Score = 30.4 bits (60), Expect(5) = 9e-024
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -1 / +1
Query: 364 PVVAGXXXXXXXXRVPGQRVRRAL 293
PVVAG RVPGQR RRAL
Sbjct: 310 PVVAGSYARRDRLRVPGQRHRRAL 381
Score = 30.4 bits (60), Expect(3) = 1e-041
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / -1
Query: 39 PALXXQSSAFNXLE*SXIXWLLG 107
P QSSAF LE*S + W LG
Sbjct: 636 PPCVAQSSAFQRLE*SRMGWFLG 568
Score = 29.0 bits (57), Expect(5) = 9e-024
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / +1
Query: 104 QEPADAALLQXVERGRL 54
QEPA AALLQ +ER RL
Sbjct: 571 QEPAHAALLQPLERRRL 621
Score = 21.7 bits (41), Expect(5) = 9e-024
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3 / +3
Query: 305 PASPTRC 285
PASPTRC
Sbjct: 369 PASPTRC 389
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
(XEA)
Length = 1174
Score = 339 bits (734), Expect(2) = 5e-097
Identities = 132/157 (84%), Positives = 145/157 (92%)
Frame = -2 / +1
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 103 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 282
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 283 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 462
Query: 210 FHTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPR 100
FHTYSILWNPKH+IFMVDDM IRDF NLE K +AFP+
Sbjct: 463 FHTYSILWNPKHIIFMVDDMPIRDFKNLEGKGIAFPK 573
Score = 138 bits (297), Expect(3) = 1e-040
Identities = 58/65 (89%), Positives = 58/65 (89%)
Frame = +2 / -3
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP T PRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 404 VNTLVCSV*GSPVTFPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 225
Query: 449 DWNPE 463
DWNPE
Sbjct: 224 DWNPE 210
Score = 55.1 bits (114), Expect(4) = 6e-024
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -3 / +2
Query: 569 RRAAWTRSWTSRGATGGARSLTTGGC*RCRWTARPAPGSSP 447
RR A TRS T G TG ARS TT *R WT PAPGSSP
Sbjct: 104 RRRASTRSSTLPGVTGAARSSTTASS*RWDWTRSPAPGSSP 226
Score = 52.4 bits (108), Expect(4) = 6e-024
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -1 / +3
Query: 187 EPQARHLHGGRHAHQGLXQPGEQGGCVPK 101
EP+A HLHGGRHA QGL +PG +G VP+
Sbjct: 486 EPKAHHLHGGRHADQGLQEPGGEGDRVPQ 572
Score = 37.3 bits (75), Expect(3) = 1e-040
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 497 CFGFQRME*VWKSLVG 450
Score = 35.9 bits (72), Expect(2) = 5e-097
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1 / +1
Query: 121 QGGCVPKSQXMXLYSSXLNADDWXXR 44
+G PK+Q M LYSS NADDW +
Sbjct: 553 KGIAFPKNQPMRLYSSLWNADDWATQ 630
Score = 29.0 bits (57), Expect(4) = 6e-024
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / +3
Query: 104 QEPADAALLQXVERGRL 54
QEPA AALLQ +ER RL
Sbjct: 570 QEPAHAALLQPLERRRL 620
Score = 28.6 bits (56), Expect(3) = 1e-040
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / -3
Query: 54 QSSAFNXLE*SXIXWLLG 107
QSSAF LE*S + W LG
Sbjct: 620 QSSAFQRLE*SRMGWFLG 567
Score = 28.6 bits (56), Expect(4) = 6e-024
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -1 / +3
Query: 364 PVVAGXXXXXXXXRVPGQRVRRAL 293
PVVAG RVPG+R RRAL
Sbjct: 309 PVVAGSDARRDRLRVPGKRHRRAL 380
>gb|BG300865.1|BG300865 HVSMEb0018L19f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0018L19f, mRNA sequence
Length = 607
Score = 339 bits (734), Expect(2) = 7e-097
Identities = 132/157 (84%), Positives = 145/157 (92%)
Frame = -2 / +1
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 88 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 267
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 268 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 447
Query: 210 FHTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPR 100
FHTYSILWNPKH+IFMVDDM IRDF NLE K +AFP+
Sbjct: 448 FHTYSILWNPKHIIFMVDDMPIRDFKNLEGKGIAFPK 558
Score = 140 bits (301), Expect(3) = 4e-041
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -3
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 389 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 210
Query: 449 DWNPE 463
DWNPE
Sbjct: 209 DWNPE 195
Score = 55.1 bits (114), Expect(5) = 2e-025
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -3 / +2
Query: 569 RRAAWTRSWTSRGATGGARSLTTGGC*RCRWTARPAPGSSP 447
RR A TRS T G TG ARS TT *R WT PAPGSSP
Sbjct: 89 RRRASTRSSTLPGVTGAARSSTTASS*RWDWTRSPAPGSSP 211
Score = 52.4 bits (108), Expect(5) = 2e-025
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -1 / +3
Query: 187 EPQARHLHGGRHAHQGLXQPGEQGGCVPK 101
EP+A HLHGGRHA QGL +PG +G VP+
Sbjct: 471 EPKAHHLHGGRHADQGLQEPGGEGDRVPQ 557
Score = 37.3 bits (75), Expect(3) = 4e-041
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 482 CFGFQRME*VWKSLVG 435
Score = 35.4 bits (71), Expect(2) = 7e-097
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -1 / +1
Query: 121 QGGCVPKSQXMXLYSSXLNADDW 53
+G PK+Q M LYSS NADDW
Sbjct: 538 KGIAFPKNQPMRLYSSLWNADDW 606
Score = 30.4 bits (60), Expect(5) = 2e-025
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -1 / +3
Query: 364 PVVAGXXXXXXXXRVPGQRVRRAL 293
PVVAG RVPGQR RRAL
Sbjct: 294 PVVAGADARRDRLRVPGQRHRRAL 365
Score = 29.0 bits (57), Expect(5) = 2e-025
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / +3
Query: 104 QEPADAALLQXVERGRL 54
QEPA AALLQ +ER RL
Sbjct: 555 QEPAHAALLQPLERRRL 605
Score = 28.6 bits (56), Expect(3) = 4e-041
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / -3
Query: 54 QSSAFNXLE*SXIXWLLG 107
QSSAF LE*S + W LG
Sbjct: 605 QSSAFQRLE*SRMGWFLG 552
Score = 21.7 bits (41), Expect(5) = 2e-025
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3 / +2
Query: 305 PASPTRC 285
PASPTRC
Sbjct: 353 PASPTRC 373
>gb|AL450913.1|AL450913 AL450913 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04P11u 5', mRNA sequence
Length = 638
Score = 336 bits (728), Expect(2) = 1e-095
Identities = 131/157 (83%), Positives = 144/157 (91%)
Frame = -2 / +2
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 110 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 289
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 290 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 469
Query: 210 FHTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPR 100
FHTYSILWNPKH+IFMVDDM IRDF NLE +AFP+
Sbjct: 470 FHTYSILWNPKHIIFMVDDMPIRDFKNLEGXGIAFPK 580
Score = 140 bits (301), Expect(3) = 3e-041
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -3
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 411 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 232
Query: 449 DWNPE 463
DWNPE
Sbjct: 231 DWNPE 217
Score = 55.1 bits (114), Expect(5) = 2e-024
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -3 / +3
Query: 569 RRAAWTRSWTSRGATGGARSLTTGGC*RCRWTARPAPGSSP 447
RR A TRS T G TG ARS TT *R WT PAPGSSP
Sbjct: 111 RRRASTRSSTLPGVTGAARSSTTASS*RWDWTRSPAPGSSP 233
Score = 49.2 bits (101), Expect(5) = 2e-024
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = -1 / +1
Query: 187 EPQARHLHGGRHAHQGLXQPGEQGGCVPK 101
EP+A HLHGGRHA QGL +PG + VP+
Sbjct: 493 EPKAHHLHGGRHADQGLQEPGGEXDRVPQ 579
Score = 37.3 bits (75), Expect(3) = 3e-041
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 504 CFGFQRME*VWKSLVG 457
Score = 34.1 bits (68), Expect(2) = 1e-095
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1 / +2
Query: 118 GGCVPKSQXMXLYSSXLNADDWXXR 44
G PK+Q M LYS+ NADDW +
Sbjct: 563 GIAFPKNQPMXLYSNLWNADDWATQ 637
Score = 30.4 bits (60), Expect(5) = 2e-024
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -1 / +1
Query: 364 PVVAGXXXXXXXXRVPGQRVRRAL 293
PVVAG RVPGQR RRAL
Sbjct: 316 PVVAGADARRDRLRVPGQRHRRAL 387
Score = 29.0 bits (57), Expect(5) = 2e-024
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / +1
Query: 104 QEPADAALLQXVERGRL 54
QEPA AALLQ +ER RL
Sbjct: 577 QEPAHAALLQPLERRRL 627
Score = 28.6 bits (56), Expect(3) = 3e-041
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 54 QSSAFNXLE*SXIXWLLG 107
QSSAF LE*S + W LG
Sbjct: 627 QSSAFQRLE*SXMGWFLG 574
Score = 21.7 bits (41), Expect(5) = 2e-024
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3 / +3
Query: 305 PASPTRC 285
PASPTRC
Sbjct: 375 PASPTRC 395
>gb|BF626739.2|BF626739 HVSMEb0001D16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0001D16f, mRNA sequence
Length = 844
Score = 347 bits (753), Expect = 3e-095
Identities = 136/166 (81%), Positives = 149/166 (89%)
Frame = -2 / +1
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 109 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 288
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 289 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 468
Query: 210 FHTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPRASXCXSTPA 73
FHTYSILWNPKH+IFMVDDM IRDF NLE K +A P+ C STPA
Sbjct: 469 FHTYSILWNPKHIIFMVDDMPIRDFKNLEGKGIAXPKTQPCGSTPA 606
Score = 140 bits (301), Expect(3) = 8e-040
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -3
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 410 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 231
Query: 449 DWNPE 463
DWNPE
Sbjct: 230 DWNPE 216
Score = 79.4 bits (167), Expect(4) = 5e-029
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = -1 / +3
Query: 187 EPQARHLHGGRHAHQGLXQPGEQGGCVPKSQXMXLYSSXLNADDWXXRAG 38
EP+A HLHGGRHA QGL +PG +G VP+ M LYSS NADDW + G
Sbjct: 492 EPKAHHLHGGRHADQGLQEPGGEGDRVPQDPAMRLYSSLWNADDWATQGG 641
Score = 55.1 bits (114), Expect(4) = 5e-029
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -3 / +2
Query: 569 RRAAWTRSWTSRGATGGARSLTTGGC*RCRWTARPAPGSSP 447
RR A TRS T G TG ARS TT *R WT PAPGSSP
Sbjct: 110 RRRASTRSSTLPGVTGAARSSTTASS*RWDWTRSPAPGSSP 232
Score = 37.3 bits (75), Expect(3) = 8e-040
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 503 CFGFQRME*VWKSLVG 456
Score = 30.4 bits (60), Expect(4) = 5e-029
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -1 / +3
Query: 364 PVVAGXXXXXXXXRVPGQRVRRAL 293
PVVAG RVPGQR RRAL
Sbjct: 315 PVVAGADARRDRLRVPGQRHRRAL 386
Score = 24.0 bits (46), Expect(3) = 8e-040
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3 / -1
Query: 39 PALXXQSSAFNXLE*SXIXWLLGTQ 113
P QSSAF LE*S + GT+
Sbjct: 640 PPCVAQSSAFQRLE*SRMAGSWGTR 566
Score = 21.7 bits (41), Expect(4) = 5e-029
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3 / +2
Query: 305 PASPTRC 285
PASPTRC
Sbjct: 374 PASPTRC 394
>gb|BF631278.2|BF631278 HVSMEb0015H17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0015H17f, mRNA sequence
Length = 768
Score = 330 bits (715), Expect(2) = 1e-094
Identities = 128/157 (81%), Positives = 143/157 (91%)
Frame = -2 / +1
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LL L LD+ SGSGFQS+ EYLFGKIDMQL+LVPGN
Sbjct: 22 AAASFDKEFDVTWGDGRGKILNNGQLLMLGLDKVSGSGFQSKREYLFGKIDMQLKLVPGN 201
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 202 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 381
Query: 210 FHTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPR 100
FHTYSILWNPKH+IF+VDDM IRDF N+E K +AFP+
Sbjct: 382 FHTYSILWNPKHIIFLVDDMPIRDFRNMEGKGIAFPK 492
Score = 130 bits (279), Expect(3) = 1e-039
Identities = 56/65 (86%), Positives = 56/65 (86%)
Frame = +2 / -2
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV GSP TLPRNSKSISSC PCDDR* AVTVPAELPGTS SCMSILP RYS
Sbjct: 323 VNTLVCSVYGSPVTLPRNSKSISSCVGPCDDR*YAVTVPAELPGTSLSCMSILPKRYSRL 144
Query: 449 DWNPE 463
DWNPE
Sbjct: 143 DWNPE 129
Score = 37.3 bits (75), Expect(3) = 1e-039
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 416 CFGFQRME*VWKSLVG 369
Score = 36.3 bits (73), Expect(2) = 1e-094
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1 / +1
Query: 121 QGGCVPKSQXMXLYSSXLNADDWXXRAG 38
+G PK+Q M LYSS NA+DW + G
Sbjct: 472 KGIAFPKNQPMRLYSSLWNANDWATQGG 555
Score = 33.1 bits (66), Expect(3) = 1e-039
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1 / -1
Query: 508 KDLAPPVAPRDVQLLVQAARRE 573
+DLA PV P +V+LLV+A RR+
Sbjct: 84 EDLAAPVTPGNVELLVEARRRQ 19
>gb|BM370804.2|BM370804 EBro04_SQ002_F05_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_F05 5', mRNA sequence
Length = 601
Score = 330 bits (715), Expect(2) = 3e-094
Identities = 128/157 (81%), Positives = 143/157 (91%)
Frame = -2 / +1
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LL L LD+ SGSGFQS+ EYLFGKIDMQL+LVPGN
Sbjct: 76 AAASFDKEFDVTWGDGRGKILNNGQLLMLGLDKVSGSGFQSKREYLFGKIDMQLKLVPGN 255
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 256 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 435
Query: 210 FHTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPR 100
FHTYSILWNPKH+IF+VDDM IRDF N+E K +AFP+
Sbjct: 436 FHTYSILWNPKHIIFLVDDMPIRDFRNMEGKGIAFPK 546
Score = 130 bits (279), Expect(4) = 2e-042
Identities = 56/65 (86%), Positives = 56/65 (86%)
Frame = +2 / -3
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV GSP TLPRNSKSISSC PCDDR* AVTVPAELPGTS SCMSILP RYS
Sbjct: 377 VNTLVCSVYGSPVTLPRNSKSISSCVGPCDDR*YAVTVPAELPGTSLSCMSILPKRYSRL 198
Query: 449 DWNPE 463
DWNPE
Sbjct: 197 DWNPE 183
Score = 37.3 bits (75), Expect(4) = 2e-042
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 470 CFGFQRME*VWKSLVG 423
Score = 35.4 bits (71), Expect(2) = 3e-094
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -1 / +1
Query: 121 QGGCVPKSQXMXLYSSXLNADDW 53
+G PK+Q M LYSS NADDW
Sbjct: 526 KGIAFPKNQPMRLYSSLWNADDW 594
Score = 33.1 bits (66), Expect(4) = 2e-042
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1 / -2
Query: 508 KDLAPPVAPRDVQLLVQAARRE 573
+DLA PV P +V+LLV+A RR+
Sbjct: 138 EDLAAPVTPGNVELLVEARRRQ 73
Score = 27.6 bits (54), Expect(4) = 2e-042
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3 / -3
Query: 54 QSSAFNXLE*SXIXWLLG 107
QSSAF LE S I W LG
Sbjct: 593 QSSAFQRLEYSRIGWFLG 540
>gb|BQ764817.1|BQ764817 EBca01_SQ005_A06_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_A06 5', mRNA sequence
Length = 634
Score = 332 bits (719), Expect = 2e-090
Identities = 129/159 (81%), Positives = 144/159 (90%)
Frame = -2 / +1
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LL L LD+ SGSGFQS+ EYLFGKIDMQL+LVPGN
Sbjct: 154 AAASFDKEFDVTWGDGRGKILNNGQLLMLGLDKVSGSGFQSKREYLFGKIDMQLKLVPGN 333
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 334 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 513
Query: 210 FHTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPRAS 94
FHTYSILWNPKH+IF+VDDM IRDF N+E K +AFPR +
Sbjct: 514 FHTYSILWNPKHIIFLVDDMPIRDFRNMEGKGIAFPRTN 630
Score = 130 bits (279), Expect(4) = 6e-040
Identities = 56/65 (86%), Positives = 56/65 (86%)
Frame = +2 / -3
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV GSP TLPRNSKSISSC PCDDR* AVTVPAELPGTS SCMSILP RYS
Sbjct: 455 VNTLVCSVYGSPVTLPRNSKSISSCVGPCDDR*YAVTVPAELPGTSLSCMSILPKRYSRL 276
Query: 449 DWNPE 463
DWNPE
Sbjct: 275 DWNPE 261
Score = 37.3 bits (75), Expect(4) = 6e-040
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 548 CFGFQRME*VWKSLVG 501
Score = 33.1 bits (66), Expect(4) = 6e-040
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1 / -2
Query: 508 KDLAPPVAPRDVQLLVQAARRE 573
+DLA PV P +V+LLV+A RR+
Sbjct: 216 EDLAAPVTPGNVELLVEARRRQ 151
Score = 21.7 bits (41), Expect(4) = 6e-040
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1 / -2
Query: 103 WERNHLALQVAEVP 144
WE + L+L V EVP
Sbjct: 621 WEGDPLSLHVPEVP 580
>gb|BE195774.3|BE195774 HVSMEh0090G19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090G19f, mRNA sequence
Length = 921
Score = 315 bits (682), Expect(2) = 4e-088
Identities = 125/151 (82%), Positives = 135/151 (89%)
Frame = -2 / +3
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 108 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 287
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT GQGQREQQFRLWFDPT D
Sbjct: 288 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTXGQGQREQQFRLWFDPTND 467
Query: 210 FHTYSILWNPKHVIFMVDDMXIRDFXNLESK 118
FHTY IL NPKH+IFM DDM I DF NLE K
Sbjct: 468 FHTYCILLNPKHIIFMGDDMPITDFKNLEGK 560
Score = 140 bits (301), Expect = 7e-033
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -3
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 409 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 230
Query: 449 DWNPE 463
DWNPE
Sbjct: 229 DWNPE 215
Score = 29.9 bits (59), Expect(2) = 4e-088
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1 / +1
Query: 124 EQGGCVPKSQXMXLYSSXLNADDWXXRAGXXDGLVHAPSP 5
E+G PK++ M +Y + NAD+W G + A +P
Sbjct: 556 EKGIAFPKNKPMRVYFNLWNADNWGTPGGPGKNGLGANTP 675
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
(XEB)
Length = 1226
Score = 299 bits (647), Expect(2) = 6e-086
Identities = 117/157 (74%), Positives = 138/157 (87%)
Frame = -2 / +2
Query: 567 AGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNS 388
AG+ Q+ +++WGDGRGKV+D GR L L+LD+TSGSGFQS+ EYLFGKIDMQ++LVPGNS
Sbjct: 167 AGNFFQDSEMSWGDGRGKVVDGGRGLDLTLDKTSGSGFQSKSEYLFGKIDMQIKLVPGNS 346
Query: 387 AGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADF 208
AGTVT +YLSSQG AHDEIDFEFLGNV+GEPYTLHTNVF +GQGQREQQFRLWFDPT F
Sbjct: 347 AGTVTTFYLSSQGTAHDEIDFEFLGNVTGEPYTLHTNVFAQGQGQREQQFRLWFDPTKAF 526
Query: 207 HTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPRA 97
HTYSI+WNP+HVIF VD IRDF N E++ V+FP++
Sbjct: 527 HTYSIIWNPQHVIFAVDGTAIRDFKNHEARGVSFPKS 637
Score = 126 bits (270), Expect(3) = 9e-036
Identities = 54/64 (84%), Positives = 54/64 (84%)
Frame = +2 / -3
Query: 272 NTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRD 451
NTLVCSV*GSP TLPRNSKSISSCA PCDDR* VTVPAELPGTS CMSILP RYS D
Sbjct: 462 NTLVCSV*GSPVTLPRNSKSISSCAVPCDDR*KVVTVPAELPGTSLICMSILPKRYSLLD 283
Query: 452 WNPE 463
W PE
Sbjct: 282 WKPE 271
Score = 38.6 bits (78), Expect(2) = 6e-086
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -1 / +2
Query: 121 QGGCVPKSQXMXLYSSXLNADDWXXRAG 38
+G PKSQ M LY+S NADDW + G
Sbjct: 614 RGVSFPKSQPMRLYASLWNADDWATQGG 697
Score = 32.7 bits (65), Expect(3) = 9e-036
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 176 CLGFQRME*VWKSAVG 223
C GFQ ME*VWK+ VG
Sbjct: 558 CCGFQMME*VWKALVG 511
Score = 29.0 bits (57), Expect(3) = 9e-036
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / -3
Query: 39 PALXXQSSAFNXLE*SXIXWLLG 107
P QSSAF+ L S I WLLG
Sbjct: 696 PPCVAQSSAFHRLAYSRIGWLLG 628
>gb|BF260656.2|BF260656 HVSMEf0022J12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022J12f, mRNA sequence
Length = 729
Score = 299 bits (647), Expect(2) = 7e-086
Identities = 117/157 (74%), Positives = 138/157 (87%)
Frame = -2 / +1
Query: 567 AGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNS 388
AG+ Q+ +++WGDGRGKV+D GR L L+LD+TSGSGFQS+ EYLFGKIDMQ++LVPGNS
Sbjct: 163 AGNFFQDSEMSWGDGRGKVVDGGRGLDLTLDKTSGSGFQSKSEYLFGKIDMQIKLVPGNS 342
Query: 387 AGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADF 208
AGTVT +YLSSQG AHDEIDFEFLGNV+GEPYTLHTNVF +GQGQREQQFRLWFDPT F
Sbjct: 343 AGTVTTFYLSSQGTAHDEIDFEFLGNVTGEPYTLHTNVFAQGQGQREQQFRLWFDPTKAF 522
Query: 207 HTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPRA 97
HTYSI+WNP+HVIF VD IRDF N E++ V+FP++
Sbjct: 523 HTYSIIWNPQHVIFAVDGTAIRDFKNHEARGVSFPKS 633
Score = 126 bits (270), Expect(3) = 9e-036
Identities = 54/64 (84%), Positives = 54/64 (84%)
Frame = +2 / -2
Query: 272 NTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRD 451
NTLVCSV*GSP TLPRNSKSISSCA PCDDR* VTVPAELPGTS CMSILP RYS D
Sbjct: 458 NTLVCSV*GSPVTLPRNSKSISSCAVPCDDR*KVVTVPAELPGTSLICMSILPKRYSLLD 279
Query: 452 WNPE 463
W PE
Sbjct: 278 WKPE 267
Score = 38.6 bits (78), Expect(2) = 7e-086
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -1 / +1
Query: 121 QGGCVPKSQXMXLYSSXLNADDWXXRAG 38
+G PKSQ M LY+S NADDW + G
Sbjct: 610 RGVSFPKSQPMRLYASLWNADDWATQGG 693
Score = 32.7 bits (65), Expect(3) = 9e-036
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 176 CLGFQRME*VWKSAVG 223
C GFQ ME*VWK+ VG
Sbjct: 554 CCGFQMME*VWKALVG 507
Score = 29.0 bits (57), Expect(3) = 9e-036
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / -2
Query: 39 PALXXQSSAFNXLE*SXIXWLLG 107
P QSSAF+ L S I WLLG
Sbjct: 692 PPCVAQSSAFHRLAYSRIGWLLG 624
>gb|CA020574.1|CA020574 HZ36L09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36L09
5-PRIME, mRNA sequence
Length = 589
Score = 314 bits (681), Expect = 3e-085
Identities = 123/142 (86%), Positives = 134/142 (94%)
Frame = -2 / +2
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E DITWGDGRGK+L+NG+LLTL+LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 164 AAASFDKEFDITWGDGRGKILNNGQLLTLALDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 343
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 344 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 523
Query: 210 FHTYSILWNPKHVIFMVDDMXI 145
FHTYSILWNPKH+IFMVDDM I
Sbjct: 524 FHTYSILWNPKHIIFMVDDMPI 589
Score = 138 bits (296), Expect(3) = 4e-043
Identities = 58/65 (89%), Positives = 58/65 (89%)
Frame = +2 / -2
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR* AVTVPAELPGTS SCMSILP RYSC
Sbjct: 465 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR*YAVTVPAELPGTSLSCMSILPKRYSCL 286
Query: 449 DWNPE 463
DWNPE
Sbjct: 285 DWNPE 271
Score = 37.3 bits (75), Expect(3) = 4e-043
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1 / -1
Query: 508 KDLAPPVAPRDVQLLVQAARRE 573
+DLA PVAP DV+LLV+A RR+
Sbjct: 226 QDLATPVAPGDVELLVEARRRQ 161
Score = 37.3 bits (75), Expect(3) = 4e-043
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 558 CFGFQRME*VWKSLVG 511
>gb|BQ462941.1|BQ462941 HI02H24r HI Hordeum vulgare subsp. vulgare cDNA clone HI02H24
5-PRIME, mRNA sequence
Length = 538
Score = 314 bits (679), Expect = 5e-085
Identities = 122/142 (85%), Positives = 133/142 (93%)
Frame = -2 / +3
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 111 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 290
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 291 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 470
Query: 210 FHTYSILWNPKHVIFMVDDMXI 145
FHTYSILWNPKH+IFMVDDM I
Sbjct: 471 FHTYSILWNPKHIIFMVDDMPI 536
Score = 140 bits (301), Expect(2) = 4e-038
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -1
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 412 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 233
Query: 449 DWNPE 463
DWNPE
Sbjct: 232 DWNPE 218
Score = 37.3 bits (75), Expect(2) = 4e-038
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -1
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 505 CFGFQRME*VWKSLVG 458
>gb|BQ764772.1|BQ764772 EBca01_SQ004_H24_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_H24 5', mRNA sequence
Length = 525
Score = 314 bits (679), Expect = 5e-085
Identities = 122/142 (85%), Positives = 133/142 (93%)
Frame = -2 / +1
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 100 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 279
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 280 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 459
Query: 210 FHTYSILWNPKHVIFMVDDMXI 145
FHTYSILWNPKH+IFMVDDM I
Sbjct: 460 FHTYSILWNPKHIIFMVDDMPI 525
Score = 140 bits (301), Expect(2) = 4e-038
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -2
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 401 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 222
Query: 449 DWNPE 463
DWNPE
Sbjct: 221 DWNPE 207
Score = 37.3 bits (75), Expect(2) = 4e-038
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 494 CFGFQRME*VWKSLVG 447
>gb|BQ759958.1|BQ759958 EBpi05_SQ004_P23_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_P23 5', mRNA sequence
Length = 537
Score = 312 bits (675), Expect = 2e-084
Identities = 121/142 (85%), Positives = 132/142 (92%)
Frame = -2 / +2
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 110 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 289
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 290 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 469
Query: 210 FHTYSILWNPKHVIFMVDDMXI 145
FHTYSILWNPKH+IFM DDM I
Sbjct: 470 FHTYSILWNPKHIIFMADDMPI 535
Score = 140 bits (301), Expect(2) = 4e-038
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -1
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 411 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 232
Query: 449 DWNPE 463
DWNPE
Sbjct: 231 DWNPE 217
Score = 37.3 bits (75), Expect(2) = 4e-038
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -1
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 504 CFGFQRME*VWKSLVG 457
>gb|AL500460.1|AL500460 AL500460 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK06L16r 3', mRNA sequence
Length = 700
Score = 288 bits (624), Expect(2) = 9e-083
Identities = 113/135 (83%), Positives = 124/135 (91%)
Frame = -2 / -1
Query: 504 NGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNSAGTVTAYYLSSQGGAHDEIDF 325
NG+LL L LD+ SGSGFQS+ EYLFGKIDMQL+LVPGNSAGTVTAYYLSSQG HDEIDF
Sbjct: 607 NGQLLMLGLDKVSGSGFQSKREYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDF 428
Query: 324 EFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADFHTYSILWNPKHVIFMVDDMXI 145
EFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT DFHTYSILWNPKH+IF+VDDM I
Sbjct: 427 EFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTNDFHTYSILWNPKHIIFLVDDMPI 248
Query: 144 RDFXNLESKVVAFPR 100
RDF N+E K +AFP+
Sbjct: 247 RDFRNMEGKGIAFPK 203
Score = 130 bits (279), Expect(3) = 2e-038
Identities = 56/65 (86%), Positives = 56/65 (86%)
Frame = +2 / +3
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV GSP TLPRNSKSISSC PCDDR* AVTVPAELPGTS SCMSILP RYS
Sbjct: 372 VNTLVCSVYGSPVTLPRNSKSISSCVGPCDDR*YAVTVPAELPGTSLSCMSILPKRYSRL 551
Query: 449 DWNPE 463
DWNPE
Sbjct: 552 DWNPE 566
Score = 38.6 bits (78), Expect(2) = 9e-083
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -1 / -1
Query: 121 QGGCVPKSQXMXLYSSXLNADDWXXRAG 38
+G PK+Q M LYSS NADDW + G
Sbjct: 223 KGIAFPKNQPMRLYSSLWNADDWATQGG 140
Score = 37.3 bits (75), Expect(3) = 2e-038
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / +3
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 279 CFGFQRME*VWKSLVG 326
Score = 29.5 bits (58), Expect(3) = 2e-038
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3 / +3
Query: 39 PALXXQSSAFNXLE*SXIXWLLG 107
P QSSAF LE S I W LG
Sbjct: 141 PPCVAQSSAFQRLEYSRIGWFLG 209
>gb|BU997613.1|BU997613 HI08H24r HI Hordeum vulgare subsp. vulgare cDNA clone HI08H24
5-PRIME, mRNA sequence
Length = 490
Score = 306 bits (662), Expect = 1e-082
Identities = 120/142 (84%), Positives = 131/142 (92%)
Frame = -2 / +3
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E DITWGDGRGK+L+NG+LLTL+LD+ GSGFQS+HEYL GKIDMQL+LVPGN
Sbjct: 63 AAASFDKEFDITWGDGRGKILNNGQLLTLALDKVFGSGFQSKHEYLLGKIDMQLKLVPGN 242
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 243 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 422
Query: 210 FHTYSILWNPKHVIFMVDDMXI 145
HTYSILWNPKH+IFMVDDM I
Sbjct: 423 XHTYSILWNPKHIIFMVDDMPI 488
Score = 138 bits (296), Expect(3) = 3e-041
Identities = 58/65 (89%), Positives = 58/65 (89%)
Frame = +2 / -1
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR* AVTVPAELPGTS SCMSILP RYSC
Sbjct: 364 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR*YAVTVPAELPGTSLSCMSILPKRYSCL 185
Query: 449 DWNPE 463
DWNPE
Sbjct: 184 DWNPE 170
Score = 37.3 bits (75), Expect(3) = 3e-041
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 508 KDLAPPVAPRDVQLLVQAARRE 573
+DLA PVAP DV+LLV+A RR+
Sbjct: 125 QDLATPVAPGDVELLVEARRRQ 60
Score = 31.3 bits (62), Expect(3) = 3e-041
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*V KS VG
Sbjct: 457 CFGFQRME*VXKSLVG 410
>gb|BE455947.3|BE455947 HVSMEg0017N10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017N10f, mRNA sequence
Length = 801
Score = 289 bits (625), Expect(2) = 6e-082
Identities = 114/157 (72%), Positives = 135/157 (85%)
Frame = -2 / +3
Query: 567 AGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNS 388
AG+ Q+ +++WGDGRGKV+D GR L L+LD+TSGSGFQS+ EYLFGKIDMQ++LVPGNS
Sbjct: 162 AGNFFQDSEMSWGDGRGKVVDGGRGLDLTLDKTSGSGFQSKSEYLFGKIDMQIKLVPGNS 341
Query: 387 AGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADF 208
AGTVT +YLSSQG AHDEIDFEFLGNV+ EPYTLHTNVF +GQGQREQQFRLWFDPT F
Sbjct: 342 AGTVTTFYLSSQGTAHDEIDFEFLGNVTREPYTLHTNVFAQGQGQREQQFRLWFDPTKAF 521
Query: 207 HTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPRA 97
HT I+WNP+HVIF VD IRDF N E++ V+FP++
Sbjct: 522 HTXLIIWNPQHVIFAVDGTAIRDFKNHEARGVSFPKS 632
Score = 115 bits (246), Expect(3) = 1e-030
Identities = 52/64 (81%), Positives = 52/64 (81%)
Frame = +2 / -3
Query: 272 NTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRD 451
NTLVCSV*GS TLPRNSKSISSCA PCDDR* VTVPAELPGTS CMSILP RYS D
Sbjct: 457 NTLVCSV*GSRVTLPRNSKSISSCAVPCDDR*KVVTVPAELPGTSLICMSILPKRYSLLD 278
Query: 452 WNPE 463
PE
Sbjct: 277 *KPE 266
Score = 35.4 bits (71), Expect(2) = 6e-082
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -1 / +3
Query: 121 QGGCVPKSQXMXLYSSXLNADDW 53
+G PKSQ M LY+S NADDW
Sbjct: 609 RGVSFPKSQPMRLYASLWNADDW 677
Score = 28.1 bits (55), Expect(3) = 1e-030
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2 / -3
Query: 176 CLGFQRME*VWKSAVG 223
C GFQ M VWK+ VG
Sbjct: 553 CCGFQMMSXVWKALVG 506
Score = 27.2 bits (53), Expect(3) = 1e-030
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / -3
Query: 54 QSSAFNXLE*SXIXWLLG 107
QSSAF+ L S I WLLG
Sbjct: 676 QSSAFHRLAYSRIGWLLG 623
>gb|BQ467526.1|BQ467526 HS04B01r HS Hordeum vulgare subsp. vulgare cDNA clone HS04B01
5-PRIME, mRNA sequence
Length = 665
Score = 300 bits (649), Expect(2) = 2e-081
Identities = 117/157 (74%), Positives = 138/157 (87%)
Frame = -2 / +3
Query: 567 AGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNS 388
AG+ Q+ +++WGDGRGKV+D GR L L+LD+TSGSGFQS+ EYLFGKIDMQ++LVPGNS
Sbjct: 162 AGNFFQDSEMSWGDGRGKVVDGGRGLDLTLDKTSGSGFQSKSEYLFGKIDMQIKLVPGNS 341
Query: 387 AGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADF 208
AGTVT +YLSSQG AHDEIDFEFLGNV+GEPYTLHTNVF +GQGQREQQFRLWFDPT F
Sbjct: 342 AGTVTTFYLSSQGTAHDEIDFEFLGNVTGEPYTLHTNVFAQGQGQREQQFRLWFDPTKAF 521
Query: 207 HTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPRA 97
HTYSI+WNP+HVIF VD IRDF N E++ V+FP++
Sbjct: 522 HTYSIIWNPQHVIFAVDGTAIRDFKNHEARXVSFPKS 632
Score = 126 bits (270), Expect(2) = 2e-032
Identities = 54/64 (84%), Positives = 54/64 (84%)
Frame = +2 / -2
Query: 272 NTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRD 451
NTLVCSV*GSP TLPRNSKSISSCA PCDDR* VTVPAELPGTS CMSILP RYS D
Sbjct: 457 NTLVCSV*GSPVTLPRNSKSISSCAVPCDDR*KVVTVPAELPGTSLICMSILPKRYSLLD 278
Query: 452 WNPE 463
W PE
Sbjct: 277 WKPE 266
Score = 32.7 bits (65), Expect(2) = 2e-032
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 176 CLGFQRME*VWKSAVG 223
C GFQ ME*VWK+ VG
Sbjct: 553 CCGFQMME*VWKALVG 506
Score = 22.6 bits (43), Expect(2) = 2e-081
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3 / +2
Query: 104 QEPADAALLQXVE 66
QEPADAA+ + VE
Sbjct: 626 QEPADAAVREPVE 664
>gb|AL450643.1|AL450643 AL450643 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK03J06u 5', mRNA sequence
Length = 529
Score = 301 bits (651), Expect = 4e-081
Identities = 117/137 (85%), Positives = 128/137 (93%)
Frame = -2 / +2
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 104 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 283
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFD T D
Sbjct: 284 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDXTND 463
Query: 210 FHTYSILWNPKHVIFMV 160
FHTYSILWNPKH+IFMV
Sbjct: 464 FHTYSILWNPKHIIFMV 514
Score = 140 bits (301), Expect(2) = 3e-037
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -2
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 405 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 226
Query: 449 DWNPE 463
DWNPE
Sbjct: 225 DWNPE 211
Score = 34.5 bits (69), Expect(2) = 3e-037
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / -2
Query: 176 CLGFQRME*VWKSAV 220
C GFQRME*VWKS V
Sbjct: 498 CFGFQRME*VWKSLV 454
>gb|BF629221.2|BF629221 HVSMEb0010F24f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010F24f, mRNA sequence
Length = 737
Score = 301 bits (651), Expect = 4e-081
Identities = 119/151 (78%), Positives = 135/151 (89%)
Frame = -2 / +3
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
+A S ++E +IT GDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 93 SAASFNKEFNIT*GDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 272
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQ RLWFDPT D
Sbjct: 273 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQLRLWFDPTND 452
Query: 210 FHTYSILWNPKHVIFMVDDMXIRDFXNLESK 118
FHTYSILWNPKH+IFMVD M I++F E +
Sbjct: 453 FHTYSILWNPKHIIFMVDHMPIKEFKKPEGE 545
Score = 143 bits (307), Expect(2) = 7e-039
Identities = 60/65 (92%), Positives = 60/65 (92%)
Frame = +2 / -2
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILPNRYSC
Sbjct: 394 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPNRYSCL 215
Query: 449 DWNPE 463
DWNPE
Sbjct: 214 DWNPE 200
Score = 37.3 bits (75), Expect(2) = 7e-039
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 487 CFGFQRME*VWKSLVG 440
>gb|BF618579.2|BF618579 HVSMEc0006G01f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0006G01f, mRNA sequence
Length = 557
Score = 283 bits (612), Expect(2) = 3e-080
Identities = 110/130 (84%), Positives = 120/130 (92%)
Frame = -2 / +3
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 105 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 284
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT GQGQREQQFRLWF+ T D
Sbjct: 285 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTHGQGQREQQFRLWFESTND 464
Query: 210 FHTYSILWNP 181
FHTYSILWNP
Sbjct: 465 FHTYSILWNP 494
Score = 140 bits (301), Expect(2) = 5e-036
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -2
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 406 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 227
Query: 449 DWNPE 463
DWNPE
Sbjct: 226 DWNPE 212
Score = 35.9 bits (72), Expect(2) = 3e-080
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -2 / +2
Query: 183 PKHVIFMVDDMXIRD 139
PKH+IFMVDDM IRD
Sbjct: 491 PKHIIFMVDDMPIRD 535
Score = 30.4 bits (60), Expect(2) = 5e-036
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2 / -2
Query: 182 GFQRME*VWKSAV 220
GFQRME*VWKS V
Sbjct: 493 GFQRME*VWKSLV 455
>gb|BF628380.2|BF628380 HVSMEb0003O02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0003O02f, mRNA sequence
Length = 507
Score = 297 bits (642), Expect = 6e-080
Identities = 114/134 (85%), Positives = 126/134 (94%)
Frame = -2 / +1
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 106 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 285
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 286 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 465
Query: 210 FHTYSILWNPKHVI 169
FHTYSILWNPKH++
Sbjct: 466 FHTYSILWNPKHIM 507
Score = 140 bits (301), Expect(2) = 4e-038
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -2
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 407 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 228
Query: 449 DWNPE 463
DWNPE
Sbjct: 227 DWNPE 213
Score = 37.3 bits (75), Expect(2) = 4e-038
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 500 CFGFQRME*VWKSLVG 453
>gb|CA024504.1|CA024504 HZ49H21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49H21
5-PRIME, mRNA sequence
Length = 562
Score = 296 bits (640), Expect = 1e-079
Identities = 115/132 (87%), Positives = 125/132 (94%)
Frame = -2 / +2
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E DITWGDGRGK+L+NG+LLTL+LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 167 AAASFDKEFDITWGDGRGKILNNGQLLTLALDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 346
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 347 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 526
Query: 210 FHTYSILWNPKH 175
FHTYSILWNPKH
Sbjct: 527 FHTYSILWNPKH 562
Score = 138 bits (296), Expect(3) = 4e-043
Identities = 58/65 (89%), Positives = 58/65 (89%)
Frame = +2 / -2
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR* AVTVPAELPGTS SCMSILP RYSC
Sbjct: 468 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR*YAVTVPAELPGTSLSCMSILPKRYSCL 289
Query: 449 DWNPE 463
DWNPE
Sbjct: 288 DWNPE 274
Score = 37.3 bits (75), Expect(3) = 4e-043
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1 / -1
Query: 508 KDLAPPVAPRDVQLLVQAARRE 573
+DLA PVAP DV+LLV+A RR+
Sbjct: 229 QDLATPVAPGDVELLVEARRRQ 164
Score = 37.3 bits (75), Expect(3) = 4e-043
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 561 CFGFQRME*VWKSLVG 514
>gb|AL500129.1|AL500129 AL500129 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK05A03r 3', mRNA sequence
Length = 439
Score = 277 bits (599), Expect(2) = 2e-078
Identities = 109/127 (85%), Positives = 117/127 (92%)
Frame = -2 / -3
Query: 480 LDRTSGSGFQSRHEYLFGKIDMQLRLVPGNSAGTVTAYYLSSQGGAHDEIDFEFLGNVSG 301
LD+ SGSGFQS+ EYLFGK DMQL+LVPGNSAGTVTAYYLSSQG HDEIDFEFLGNV+G
Sbjct: 437 LDKVSGSGFQSKXEYLFGKXDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNVTG 258
Query: 300 EPYTLHTNVFTRGQGQREQQFRLWFDPTADFHTYSILWNPKHVIFMVDDMXIRDFXNLES 121
EPYTLHTNVFT+GQGQREQQFRLWFDPT DFHTYSILWNPKH+IFMVDDM IRDF NLE
Sbjct: 257 EPYTLHTNVFTQGQGQREQQFRLWFDPTNDFHTYSILWNPKHIIFMVDDMPIRDFKNLEG 78
Query: 120 KVVAFPR 100
K +AFP+
Sbjct: 77 KGIAFPK 57
Score = 140 bits (301), Expect(3) = 4e-041
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / +1
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 226 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 405
Query: 449 DWNPE 463
DWNPE
Sbjct: 406 DWNPE 420
Score = 37.3 bits (75), Expect(3) = 4e-041
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / +1
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 133 CFGFQRME*VWKSLVG 180
Score = 35.4 bits (71), Expect(2) = 2e-078
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -1 / -3
Query: 121 QGGCVPKSQXMXLYSSXLNADDW 53
+G PK+Q M LYSS NADDW
Sbjct: 77 KGIAFPKNQPMRLYSSLWNADDW 9
Score = 28.6 bits (56), Expect(3) = 4e-041
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / +1
Query: 54 QSSAFNXLE*SXIXWLLG 107
QSSAF LE*S + W LG
Sbjct: 10 QSSAFQRLE*SRMGWFLG 63
>gb|BF260946.2|BF260946 HVSMEf0023F18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023F18f, mRNA sequence
Length = 798
Score = 287 bits (621), Expect(2) = 4e-078
Identities = 113/157 (71%), Positives = 135/157 (85%)
Frame = -2 / +2
Query: 567 AGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNS 388
AG+ Q+ +++WGDGRGKV++ GR L L+LD+TSGSGFQS+ EYLFGKIDMQ++LVPGNS
Sbjct: 176 AGNFFQDSEMSWGDGRGKVVNGGRGLDLTLDKTSGSGFQSKSEYLFGKIDMQIKLVPGNS 355
Query: 387 AGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADF 208
AGTVT +YLSSQG AHDEIDFEFLGNV+GEPYTLHTNVF +GQGQREQQFRLWFDPT F
Sbjct: 356 AGTVTTFYLSSQGTAHDEIDFEFLGNVTGEPYTLHTNVFPQGQGQREQQFRLWFDPTKAF 535
Query: 207 HTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPRA 97
HTYSI+WNP+HVIF VD IRDF N +++ P++
Sbjct: 536 HTYSIIWNPQHVIFPVDRPAIRDFKNQQARGRVVPKS 646
Score = 119 bits (255), Expect(2) = 2e-030
Identities = 53/64 (82%), Positives = 53/64 (82%)
Frame = +2 / -1
Query: 272 NTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRD 451
NTLVCSV*GSP TLPRNSKSISSCA PCDDR* VTVPAELPGTS CMSILP RYS D
Sbjct: 471 NTLVCSV*GSPVTLPRNSKSISSCAVPCDDR*KVVTVPAELPGTSLICMSILPKRYSLLD 292
Query: 452 WNPE 463
PE
Sbjct: 291 *KPE 280
Score = 32.7 bits (65), Expect(2) = 2e-030
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 176 CLGFQRME*VWKSAVG 223
C GFQ ME*VWK+ VG
Sbjct: 567 CCGFQMME*VWKALVG 520
Score = 24.4 bits (47), Expect(2) = 4e-078
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1 / +3
Query: 106 PKSQXMXLYSSXLNADDWXXRA 41
P++ L +S NADDW +A
Sbjct: 639 PRANRCRLSASLGNADDWASQA 704
>gb|BE060552.2|BE060552 HVSMEg0012J20f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0012J20f, mRNA sequence
Length = 621
Score = 290 bits (628), Expect = 5e-078
Identities = 114/150 (76%), Positives = 132/150 (88%)
Frame = -2 / +2
Query: 567 AGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNS 388
AG+ Q+ +++WGDGRGKV+D GR L L+LD+TSGSGFQS+ EYLFGKIDMQ++LVPGNS
Sbjct: 167 AGNFFQDSEMSWGDGRGKVVDGGRGLDLTLDKTSGSGFQSKSEYLFGKIDMQIKLVPGNS 346
Query: 387 AGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADF 208
AGTVT +YLSSQG AHDEIDFEFLGNV+GEPYTLHTNVF +GQGQREQQFRLWFDPT F
Sbjct: 347 AGTVTTFYLSSQGTAHDEIDFEFLGNVTGEPYTLHTNVFAQGQGQREQQFRLWFDPTKAF 526
Query: 207 HTYSILWNPKHVIFMVDDMXIRDFXNLESK 118
HTYSI+WNP+HVIF VD IRDF N E++
Sbjct: 527 HTYSIIWNPQHVIFAVDGTGIRDFKNPEAR 616
Score = 126 bits (270), Expect(2) = 2e-032
Identities = 54/64 (84%), Positives = 54/64 (84%)
Frame = +2 / -1
Query: 272 NTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRD 451
NTLVCSV*GSP TLPRNSKSISSCA PCDDR* VTVPAELPGTS CMSILP RYS D
Sbjct: 462 NTLVCSV*GSPVTLPRNSKSISSCAVPCDDR*KVVTVPAELPGTSLICMSILPKRYSLLD 283
Query: 452 WNPE 463
W PE
Sbjct: 282 WKPE 271
Score = 32.7 bits (65), Expect(2) = 2e-032
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 176 CLGFQRME*VWKSAVG 223
C GFQ ME*VWK+ VG
Sbjct: 558 CCGFQMME*VWKALVG 511
>gb|BI960618.1|BI960618 HVSMEn0025G09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025G09f, mRNA sequence
Length = 690
Score = 286 bits (619), Expect = 9e-077
Identities = 113/149 (75%), Positives = 129/149 (86%)
Frame = -2 / +2
Query: 567 AGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNS 388
AG+ Q+ +++WGDGRGKV+D GR L L+LD+TSGSGFQS+ EYLFGKIDMQ++LVPGNS
Sbjct: 179 AGNFFQDSEMSWGDGRGKVVDGGRGLDLTLDKTSGSGFQSKSEYLFGKIDMQIKLVPGNS 358
Query: 387 AGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADF 208
AGTVT +YLSSQG AHDEIDFEFLGNV+GEPYTLHTNVF GQGQREQQFRLWFDPT
Sbjct: 359 AGTVTTFYLSSQGTAHDEIDFEFLGNVTGEPYTLHTNVFAHGQGQREQQFRLWFDPTKAX 538
Query: 207 HTYSILWNPKHVIFMVDDMXIRDFXNLES 121
HTYSI+WNP+HVIF VD IRDF N E+
Sbjct: 539 HTYSIIWNPQHVIFAVDGTAIRDFKNHEA 625
Score = 126 bits (270), Expect(2) = 1e-030
Identities = 54/64 (84%), Positives = 54/64 (84%)
Frame = +2 / -1
Query: 272 NTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRD 451
NTLVCSV*GSP TLPRNSKSISSCA PCDDR* VTVPAELPGTS CMSILP RYS D
Sbjct: 474 NTLVCSV*GSPVTLPRNSKSISSCAVPCDDR*KVVTVPAELPGTSLICMSILPKRYSLLD 295
Query: 452 WNPE 463
W PE
Sbjct: 294 WKPE 283
Score = 26.7 bits (52), Expect(2) = 1e-030
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 176 CLGFQRME*VWKSAVG 223
C GFQ ME*V K+ VG
Sbjct: 570 CCGFQMME*VXKALVG 523
>gb|BU997685.1|BU997685 HI08L09r HI Hordeum vulgare subsp. vulgare cDNA clone HI08L09
5-PRIME, mRNA sequence
Length = 583
Score = 286 bits (619), Expect = 9e-077
Identities = 112/144 (77%), Positives = 128/144 (88%)
Frame = -2 / +2
Query: 567 AGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNS 388
AG+ Q+ +++WGDGRGKV+D GR L L+LD+TSGSGFQS+ EYLFGKIDMQ++LVPGNS
Sbjct: 152 AGNFFQDSEMSWGDGRGKVVDGGRGLDLTLDKTSGSGFQSKSEYLFGKIDMQIKLVPGNS 331
Query: 387 AGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADF 208
AGTVT +YLSSQG AHDEIDFEFLGNV+GEPYTLHTNVF +GQGQREQQFRLWFDPT F
Sbjct: 332 AGTVTTFYLSSQGTAHDEIDFEFLGNVTGEPYTLHTNVFAQGQGQREQQFRLWFDPTKAF 511
Query: 207 HTYSILWNPKHVIFMVDDMXIRDF 136
HTYSI+WNP+HVIF VD IRDF
Sbjct: 512 HTYSIIWNPQHVIFAVDGTAIRDF 583
Score = 126 bits (270), Expect(2) = 2e-032
Identities = 54/64 (84%), Positives = 54/64 (84%)
Frame = +2 / -2
Query: 272 NTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRD 451
NTLVCSV*GSP TLPRNSKSISSCA PCDDR* VTVPAELPGTS CMSILP RYS D
Sbjct: 447 NTLVCSV*GSPVTLPRNSKSISSCAVPCDDR*KVVTVPAELPGTSLICMSILPKRYSLLD 268
Query: 452 WNPE 463
W PE
Sbjct: 267 WKPE 256
Score = 32.7 bits (65), Expect(2) = 2e-032
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 176 CLGFQRME*VWKSAVG 223
C GFQ ME*VWK+ VG
Sbjct: 543 CCGFQMME*VWKALVG 496
>gb|BF629930.2|BF629930 HVSMEb0007F19f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007F19f, mRNA sequence
Length = 499
Score = 285 bits (617), Expect = 2e-076
Identities = 112/132 (84%), Positives = 122/132 (92%)
Frame = -2 / +2
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+T GDGRGK+L+NG+LLTL LD+ SGS FQS+HEYLFGKIDMQL+LVPGN
Sbjct: 101 AAASFDKEFDVTXGDGRGKILNNGQLLTLGLDKVSGSRFQSKHEYLFGKIDMQLKLVPGN 280
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQFRLWFDPT D
Sbjct: 281 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTND 460
Query: 210 FHTYSILWNPKH 175
FHTYSILWNPKH
Sbjct: 461 FHTYSILWNPKH 496
Score = 136 bits (292), Expect(2) = 7e-037
Identities = 58/65 (89%), Positives = 58/65 (89%)
Frame = +2 / -2
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 402 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 223
Query: 449 DWNPE 463
DWN E
Sbjct: 222 DWNRE 208
Score = 37.3 bits (75), Expect(2) = 7e-037
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 495 CFGFQRME*VWKSLVG 448
>gb|BI960420.1|BI960420 HVSMEn0024I16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024I16f, mRNA sequence
Length = 673
Score = 210 bits (452), Expect(4) = 2e-076
Identities = 84/98 (85%), Positives = 89/98 (90%)
Frame = -2 / +3
Query: 501 GRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNSAGTVTAYYLSSQGGAHDEIDFE 322
G LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGNSAGTVTAYYLSSQG HDEIDFE
Sbjct: 171 GXLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFE 350
Query: 321 FLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADF 208
FLGNV+GEPYTLHTNVFT+GQGQ EQQFRLWFDP F
Sbjct: 351 FLGNVTGEPYTLHTNVFTQGQGQPEQQFRLWFDPPTTF 464
Score = 140 bits (301), Expect(2) = 7e-037
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -1
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 403 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 224
Query: 449 DWNPE 463
DWNPE
Sbjct: 223 DWNPE 209
Score = 56.5 bits (117), Expect(4) = 2e-076
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = -2 / +1
Query: 183 PKHVIFMVDDMXIRDFXNLESKVVAFPRASXCXSTPA 73
PKH+IFMVDDM IRDF E K + FP+ C ST A
Sbjct: 487 PKHIIFMVDDMPIRDFXTSEGKGIRFPKTXPCGSTSA 597
Score = 44.1 bits (90), Expect(4) = 2e-076
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -2 / +1
Query: 570 AAGSLDQELDITWGDGRGKVL 508
AA S D+E D+TWGDGRGK+L
Sbjct: 103 AAASFDKEFDVTWGDGRGKIL 165
Score = 33.1 bits (66), Expect(2) = 7e-037
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1 / -2
Query: 508 KDLAPPVAPRDVQLLVQAARRE 573
+DLA PV P +V+LLV+A RR+
Sbjct: 165 QDLAAPVTPGNVELLVEARRRQ 100
Score = 33.1 bits (66), Expect(4) = 2e-076
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / +2
Query: 219 TADFHTYSILWNP 181
T DFHTYSILW+P
Sbjct: 452 TNDFHTYSILWDP 490
>gb|BI958106.1|BI958106 HVSMEn0013G22f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0013G22f, mRNA sequence
Length = 466
Score = 264 bits (571), Expect(2) = 1e-074
Identities = 106/136 (77%), Positives = 117/136 (86%)
Frame = -2 / +2
Query: 507 DNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNSAGTVTAYYLSSQGGAHDEID 328
+NG+LLTL LD+ S SG S+ E+ K MQL+LVPGNSAGTVTAYYLSSQG HDEID
Sbjct: 2 NNGQLLTLGLDKVSSSGCASKPEFPLRKNHMQLKLVPGNSAGTVTAYYLSSQGPTHDEID 181
Query: 327 FEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADFHTYSILWNPKHVIFMVDDMX 148
F+FLGNV+GEPYTLHTNVFT GQGQREQQFRLWFDPT DFHTYSILWNPKH+IFMVDDM
Sbjct: 182 FQFLGNVTGEPYTLHTNVFTHGQGQREQQFRLWFDPTNDFHTYSILWNPKHIIFMVDDMP 361
Query: 147 IRDFXNLESKVVAFPR 100
IRDF NLE K +AFP+
Sbjct: 362 IRDFKNLEGKGIAFPK 409
Score = 106 bits (226), Expect(3) = 5e-031
Identities = 50/65 (76%), Positives = 51/65 (78%)
Frame = +2 / -2
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRN KSISSC PCDDR**AVTVPAELPGTS SCM L S
Sbjct: 240 VNTLVCSV*GSPVTLPRNWKSISSCVGPCDDR**AVTVPAELPGTSLSCM*FLRRGNSGL 61
Query: 449 DWNPE 463
D +PE
Sbjct: 60 DAHPE 46
Score = 37.3 bits (75), Expect(3) = 5e-031
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 176 CLGFQRME*VWKSAVG 223
C GFQRME*VWKS VG
Sbjct: 333 CFGFQRME*VWKSLVG 286
Score = 35.9 bits (72), Expect(2) = 1e-074
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1 / +2
Query: 121 QGGCVPKSQXMXLYSSXLNADDWXXR 44
+G PK+Q M LYSS NADDW +
Sbjct: 389 KGIAFPKNQPMRLYSSLWNADDWATQ 466
Score = 28.6 bits (56), Expect(3) = 5e-031
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / -2
Query: 54 QSSAFNXLE*SXIXWLLG 107
QSSAF LE*S + W LG
Sbjct: 456 QSSAFQRLE*SRMGWFLG 403
>gb|BF267606.1|BF267606 HV_CEa0018G10f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018G10f, mRNA sequence
Length = 531
Score = 277 bits (600), Expect = 4e-074
Identities = 104/150 (69%), Positives = 129/150 (86%)
Frame = -2 / +2
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AAG+ Q++DITWGDGRGK+L G LLTLSLDR SGSGFQS+++YL+G+ DMQ++LVPG+
Sbjct: 2 AAGNFYQDVDITWGDGRGKILGGGDLLTLSLDRASGSGFQSKNQYLYGRFDMQIKLVPGD 181
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTV +YLSSQG AHDEIDFEFLGN SG+PYT+HTNV+++G+G REQQFR+WFDPT D
Sbjct: 182 SAGTVATFYLSSQGSAHDEIDFEFLGNASGQPYTVHTNVYSQGKGGREQQFRMWFDPTVD 361
Query: 210 FHTYSILWNPKHVIFMVDDMXIRDFXNLES 121
FHTYS+LWNP H++F VD IR+ N E+
Sbjct: 362 FHTYSVLWNPTHILFYVDGTPIREHRNREA 451
Score = 105 bits (224), Expect(3) = 2e-030
Identities = 46/63 (73%), Positives = 47/63 (74%)
Frame = +2 / -1
Query: 275 TLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRDW 454
TLVC+V*G P LPRNSKSISSCA PCDDR* TVPAE PGTS CMS P RY DW
Sbjct: 297 TLVCTV*GCPLALPRNSKSISSCADPCDDR*KVATVPAESPGTSLICMSKRPYRYWFLDW 118
Query: 455 NPE 463
NPE
Sbjct: 117 NPE 109
Score = 35.4 bits (71), Expect(3) = 2e-030
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2 / -1
Query: 176 CLGFQRME*VWKSAVG 223
C+GFQR E*VWKS VG
Sbjct: 396 CVGFQRTE*VWKSTVG 349
Score = 29.0 bits (57), Expect(3) = 2e-030
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2 / -1
Query: 533 HVMSSSWSKLPAA 571
HVMS+SW KLPAA
Sbjct: 39 HVMSTSW*KLPAA 1
>gb|BG309764.2|BG309764 HVSMEc0012H20f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0012H20f, mRNA sequence
Length = 794
Score = 220 bits (475), Expect(2) = 2e-073
Identities = 86/105 (81%), Positives = 97/105 (92%)
Frame = -2 / +1
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 94 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 273
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQG 256
SAGTVTAYYLSSQG HDEIDF+FLGNV+GEPYTLHTNVFT+G G
Sbjct: 274 SAGTVTAYYLSSQGPTHDEIDFQFLGNVTGEPYTLHTNVFTQGAG 408
Score = 131 bits (281), Expect = 4e-030
Identities = 57/65 (87%), Positives = 57/65 (87%)
Frame = +2 / -1
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLV SV*GSP TLPRN KSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 395 VNTLV*SV*GSPVTLPRNWKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 216
Query: 449 DWNPE 463
DWNPE
Sbjct: 215 DWNPE 201
Score = 75.8 bits (159), Expect(2) = 2e-073
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = -2 / +2
Query: 267 RGQGQREQQFRLWFDPTADFHTYSILWNPKHVIFMVDDMXIR 142
+GQGQREQQFRLWF PT HTY IL NPKH+IFM + + IR
Sbjct: 398 KGQGQREQQFRLWFQPTNKLHTYFIL*NPKHIIFMGEQLPIR 523
>gb|BI957177.1|BI957177 HVSMEn0007P14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007P14f, mRNA sequence
Length = 908
Score = 272 bits (589), Expect = 1e-072
Identities = 108/150 (72%), Positives = 128/150 (85%)
Frame = -2 / +2
Query: 567 AGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNS 388
AG+ Q+ +++WGDGRGKV+ GR L L+LD+TSGSGFQS EYLFGKID+Q++LVPGNS
Sbjct: 155 AGNFFQDSEMSWGDGRGKVVHCGRGLDLTLDKTSGSGFQSMSEYLFGKIDVQIKLVPGNS 334
Query: 387 AGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADF 208
AGTVT +YLSSQG AHDEIDFEFLG+V+GEPYTLHTNVF +GQGQREQQFRLWFDPT F
Sbjct: 335 AGTVTTFYLSSQGTAHDEIDFEFLGDVTGEPYTLHTNVFAQGQGQREQQFRLWFDPTKAF 514
Query: 207 HTYSILWNPKHVIFMVDDMXIRDFXNLESK 118
HTY I+WNP+HVIF VD +DF N E++
Sbjct: 515 HTYCIIWNPQHVIFPVDGTGNQDFNNHEAR 604
Score = 121 bits (259), Expect(2) = 1e-030
Identities = 52/64 (81%), Positives = 52/64 (81%)
Frame = +2 / -3
Query: 272 NTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRD 451
NTLVCSV*GSP T PRNSKSISSCA PCDDR* VTVPAELPGTS C SILP RYS D
Sbjct: 450 NTLVCSV*GSPVTSPRNSKSISSCAVPCDDR*KVVTVPAELPGTSLICTSILPKRYSLMD 271
Query: 452 WNPE 463
W PE
Sbjct: 270 WKPE 259
Score = 31.3 bits (62), Expect(2) = 1e-030
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 176 CLGFQRME*VWKSAVG 223
C GFQ M+*VWK+ VG
Sbjct: 546 CCGFQMMQ*VWKALVG 499
>gb|BF624089.2|BF624089 HVSMEa0009G06f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0009G06f, mRNA sequence
Length = 798
Score = 270 bits (585), Expect = 5e-072
Identities = 105/133 (78%), Positives = 121/133 (90%)
Frame = -2 / +3
Query: 567 AGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNS 388
AG+ Q+ +++WGDGRGKV+D GR L L+LD+TSGSGFQS+ EYLFGKIDMQ++LVPGNS
Sbjct: 174 AGNFFQDSEMSWGDGRGKVVDGGRGLDLTLDKTSGSGFQSKSEYLFGKIDMQIKLVPGNS 353
Query: 387 AGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADF 208
AGTVT +YLSSQG AHDEIDFEFLGNV+GEPYTLHTNVF +GQGQREQQFRLWFDPT F
Sbjct: 354 AGTVTTFYLSSQGTAHDEIDFEFLGNVTGEPYTLHTNVFAQGQGQREQQFRLWFDPTKAF 533
Query: 207 HTYSILWNPKHVI 169
HTYSI+WNP+HVI
Sbjct: 534 HTYSIIWNPQHVI 572
Score = 126 bits (270), Expect(2) = 2e-032
Identities = 54/64 (84%), Positives = 54/64 (84%)
Frame = +2 / -3
Query: 272 NTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRD 451
NTLVCSV*GSP TLPRNSKSISSCA PCDDR* VTVPAELPGTS CMSILP RYS D
Sbjct: 469 NTLVCSV*GSPVTLPRNSKSISSCAVPCDDR*KVVTVPAELPGTSLICMSILPKRYSLLD 290
Query: 452 WNPE 463
W PE
Sbjct: 289 WKPE 278
Score = 32.7 bits (65), Expect(2) = 2e-032
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 176 CLGFQRME*VWKSAVG 223
C GFQ ME*VWK+ VG
Sbjct: 565 CCGFQMME*VWKALVG 518
>gb|BQ467998.1|BQ467998 HR01J18r HR Hordeum vulgare subsp. vulgare cDNA clone HR01J18
5-PRIME, mRNA sequence
Length = 575
Score = 270 bits (585), Expect = 5e-072
Identities = 105/133 (78%), Positives = 121/133 (90%)
Frame = -2 / +1
Query: 567 AGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNS 388
AG+ Q+ +++WGDGRGKV+D GR L L+LD+TSGSGFQS+ EYLFGKIDMQ++LVPGNS
Sbjct: 175 AGNFFQDSEMSWGDGRGKVVDGGRGLDLTLDKTSGSGFQSKSEYLFGKIDMQIKLVPGNS 354
Query: 387 AGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADF 208
AGTVT +YLSSQG AHDEIDFEFLGNV+GEPYTLHTNVF +GQGQREQQFRLWFDPT F
Sbjct: 355 AGTVTTFYLSSQGTAHDEIDFEFLGNVTGEPYTLHTNVFAQGQGQREQQFRLWFDPTKAF 534
Query: 207 HTYSILWNPKHVI 169
HTYSI+WNP+HVI
Sbjct: 535 HTYSIIWNPQHVI 573
Score = 126 bits (270), Expect(2) = 2e-032
Identities = 54/64 (84%), Positives = 54/64 (84%)
Frame = +2 / -1
Query: 272 NTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRD 451
NTLVCSV*GSP TLPRNSKSISSCA PCDDR* VTVPAELPGTS CMSILP RYS D
Sbjct: 470 NTLVCSV*GSPVTLPRNSKSISSCAVPCDDR*KVVTVPAELPGTSLICMSILPKRYSLLD 291
Query: 452 WNPE 463
W PE
Sbjct: 290 WKPE 279
Score = 32.7 bits (65), Expect(2) = 2e-032
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 176 CLGFQRME*VWKSAVG 223
C GFQ ME*VWK+ VG
Sbjct: 566 CCGFQMME*VWKALVG 519
>gb|BU997928.1|BU997928 HI09H06r HI Hordeum vulgare subsp. vulgare cDNA clone HI09H06
5-PRIME, mRNA sequence
Length = 551
Score = 270 bits (585), Expect = 5e-072
Identities = 105/133 (78%), Positives = 121/133 (90%)
Frame = -2 / +2
Query: 567 AGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNS 388
AG+ Q+ +++WGDGRGKV+D GR L L+LD+TSGSGFQS+ EYLFGKIDMQ++LVPGNS
Sbjct: 152 AGNFFQDSEMSWGDGRGKVVDGGRGLDLTLDKTSGSGFQSKSEYLFGKIDMQIKLVPGNS 331
Query: 387 AGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADF 208
AGTVT +YLSSQG AHDEIDFEFLGNV+GEPYTLHTNVF +GQGQREQQFRLWFDPT F
Sbjct: 332 AGTVTTFYLSSQGTAHDEIDFEFLGNVTGEPYTLHTNVFAQGQGQREQQFRLWFDPTKAF 511
Query: 207 HTYSILWNPKHVI 169
HTYSI+WNP+HVI
Sbjct: 512 HTYSIIWNPQHVI 550
Score = 126 bits (270), Expect(2) = 2e-032
Identities = 54/64 (84%), Positives = 54/64 (84%)
Frame = +2 / -3
Query: 272 NTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRD 451
NTLVCSV*GSP TLPRNSKSISSCA PCDDR* VTVPAELPGTS CMSILP RYS D
Sbjct: 447 NTLVCSV*GSPVTLPRNSKSISSCAVPCDDR*KVVTVPAELPGTSLICMSILPKRYSLLD 268
Query: 452 WNPE 463
W PE
Sbjct: 267 WKPE 256
Score = 32.7 bits (65), Expect(2) = 2e-032
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 176 CLGFQRME*VWKSAVG 223
C GFQ ME*VWK+ VG
Sbjct: 543 CCGFQMME*VWKALVG 496
>gb|BF627004.2|BF627004 HVSMEb0001P03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0001P03f, mRNA sequence
Length = 790
Score = 270 bits (583), Expect = 9e-072
Identities = 108/131 (82%), Positives = 119/131 (90%)
Frame = -2 / +1
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E DITWGDGRGK+L+NG+LLTL+LD+ SGSGFQS+HEYLFGKIDMQL+LVPGN
Sbjct: 148 AAASFDKEFDITWGDGRGKILNNGQLLTLALDKVSGSGFQSKHEYLFGKIDMQLKLVPGN 327
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTVTAYYLSSQG HDEIDFEFLGNV+GEPYTLHTNVFT+GQGQREQQF LWFDPT D
Sbjct: 328 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFSLWFDPTND 507
Query: 210 FHTYSILWNPK 178
T+SIL PK
Sbjct: 508 LPTFSILL*PK 540
Score = 138 bits (296), Expect(2) = 2e-037
Identities = 58/65 (89%), Positives = 58/65 (89%)
Frame = +2 / -3
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR* AVTVPAELPGTS SCMSILP RYSC
Sbjct: 449 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR*YAVTVPAELPGTSLSCMSILPKRYSCL 270
Query: 449 DWNPE 463
DWNPE
Sbjct: 269 DWNPE 255
Score = 37.3 bits (75), Expect(2) = 2e-037
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1 / -2
Query: 508 KDLAPPVAPRDVQLLVQAARRE 573
+DLA PVAP DV+LLV+A RR+
Sbjct: 210 QDLATPVAPGDVELLVEARRRQ 145
>gb|BQ460689.1|BQ460689 HA06D17r HA Hordeum vulgare subsp. vulgare cDNA clone HA06D17
5-PRIME, mRNA sequence
Length = 569
Score = 267 bits (577), Expect = 6e-071
Identities = 103/131 (78%), Positives = 119/131 (90%)
Frame = -2 / +2
Query: 567 AGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNS 388
AG+ Q+ +++WGDGRGKV+D GR L L+LD+TSGSGFQS+ EYLFGKIDMQ++LVPGNS
Sbjct: 176 AGNFFQDSEMSWGDGRGKVVDGGRGLDLTLDKTSGSGFQSKSEYLFGKIDMQIKLVPGNS 355
Query: 387 AGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADF 208
AGTVT +YLSSQG AHDEIDFEFLGNV+GEPYTLHTNVF +GQGQREQQFRLWFDPT F
Sbjct: 356 AGTVTTFYLSSQGTAHDEIDFEFLGNVTGEPYTLHTNVFAQGQGQREQQFRLWFDPTKAF 535
Query: 207 HTYSILWNPKH 175
HTYSI+WNP+H
Sbjct: 536 HTYSIIWNPQH 568
Score = 126 bits (270), Expect(2) = 2e-032
Identities = 54/64 (84%), Positives = 54/64 (84%)
Frame = +2 / -3
Query: 272 NTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRD 451
NTLVCSV*GSP TLPRNSKSISSCA PCDDR* VTVPAELPGTS CMSILP RYS D
Sbjct: 471 NTLVCSV*GSPVTLPRNSKSISSCAVPCDDR*KVVTVPAELPGTSLICMSILPKRYSLLD 292
Query: 452 WNPE 463
W PE
Sbjct: 291 WKPE 280
Score = 32.7 bits (65), Expect(2) = 2e-032
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 176 CLGFQRME*VWKSAVG 223
C GFQ ME*VWK+ VG
Sbjct: 567 CCGFQMME*VWKALVG 520
>gb|BF618456.2|BF618456 HVSMEc0005L21f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0005L21f, mRNA sequence
Length = 802
Score = 235 bits (507), Expect(2) = 6e-071
Identities = 92/111 (82%), Positives = 104/111 (93%)
Frame = -2 / +2
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AA S D+E D+TWGDGRGK+L+NG+LLTL LD+ SGSGFQS+H+YLFGKIDMQL+LVPGN
Sbjct: 101 AAASFDKEFDVTWGDGRGKILNNGQLLTLGLDKVSGSGFQSKHKYLFGKIDMQLKLVPGN 280
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQF 238
SAGTVTAYYLSSQG HDEIDFEFLGNV+G+PYTLHTNVFT+GQGQREQQF
Sbjct: 281 SAGTVTAYYLSSQGPTHDEIDFEFLGNVTGKPYTLHTNVFTQGQGQREQQF 433
Score = 135 bits (289), Expect(2) = 9e-033
Identities = 57/65 (87%), Positives = 57/65 (87%)
Frame = +2 / -2
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*G P TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RY C
Sbjct: 402 VNTLVCSV*GLPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYLCL 223
Query: 449 DWNPE 463
DWNPE
Sbjct: 222 DWNPE 208
Score = 55.1 bits (114), Expect(5) = 1e-025
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -3 / +3
Query: 569 RRAAWTRSWTSRGATGGARSLTTGGC*RCRWTARPAPGSSP 447
RR A TRS T G TG ARS TT *R WT PAPGSSP
Sbjct: 102 RRRASTRSSTLPGVTGAARSSTTASS*RWDWTRSPAPGSSP 224
Score = 52.8 bits (109), Expect(2) = 6e-071
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -2 / +2
Query: 186 NPKHVIFMVDDMXIRDFXNLESKVVAFPR 100
NPKH+I MVD+M IRDF NLE K +AFP+
Sbjct: 485 NPKHIISMVDNMPIRDFKNLEGKGIAFPK 571
Score = 47.3 bits (97), Expect(5) = 1e-025
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -2 / +3
Query: 267 RGQGQREQQFRLWFDPTADFHTYSIL 190
RG+ FRLWFDPT +FHTYSIL
Sbjct: 405 RGRANGSNSFRLWFDPTNNFHTYSIL 482
Score = 38.6 bits (78), Expect(5) = 1e-025
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -1 / +1
Query: 187 EPQARHLHGGRHAHQGLXQPGEQGGCVPKSQXMXLYSSXLNADDWXXRAGXXDGLVHAPS 8
EP+ + +GG+HA QGL +PG +G P+ + L + G P+
Sbjct: 484 EPKTHNFYGGQHADQGLQKPGGKGDRFPQKHTQSGLHTALGTRTSGAKPGRHAKEPSGPT 663
Query: 7 P 5
P
Sbjct: 664 P 666
Score = 28.6 bits (56), Expect(5) = 1e-025
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -1 / +1
Query: 364 PVVAGXXXXXXXXRVPGQRVRRAL 293
PVVAG RVPGQR R+AL
Sbjct: 307 PVVAGADARRDRLRVPGQRNRQAL 378
Score = 24.9 bits (48), Expect(2) = 9e-033
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -1
Query: 188 QRME*VWKSAVG 223
QRME*VWK VG
Sbjct: 484 QRME*VWKLLVG 449
Score = 21.7 bits (41), Expect(5) = 1e-025
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3 / +3
Query: 305 PASPTRC 285
PASPTRC
Sbjct: 366 PASPTRC 386
>gb|BE216242.1|BE216242 HV_CEb0009P07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009P07f, mRNA sequence
Length = 573
Score = 265 bits (574), Expect = 2e-070
Identities = 99/138 (71%), Positives = 122/138 (88%)
Frame = -2 / +2
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AAG+ Q++DITWGDGRGK+L G LLTLSLDR SGSGFQS+++YL+G+ DMQ++LVPG+
Sbjct: 134 AAGNFYQDVDITWGDGRGKILGGGDLLTLSLDRASGSGFQSKNQYLYGRFDMQIKLVPGD 313
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTV +YLSSQG AHDEIDFEFLGN SG+PYT+HTNV+++G+G REQQFR+WFDPT D
Sbjct: 314 SAGTVATFYLSSQGSAHDEIDFEFLGNASGQPYTVHTNVYSQGKGGREQQFRMWFDPTGD 493
Query: 210 FHTYSILWNPKHVIFMVD 157
FHT S+LWNP H++F VD
Sbjct: 494 FHT*SVLWNPTHILFYVD 547
Score = 105 bits (224), Expect(3) = 1e-028
Identities = 46/63 (73%), Positives = 47/63 (74%)
Frame = +2 / -1
Query: 275 TLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRDW 454
TLVC+V*G P LPRNSKSISSCA PCDDR* TVPAE PGTS CMS P RY DW
Sbjct: 429 TLVCTV*GCPLALPRNSKSISSCADPCDDR*KVATVPAESPGTSLICMSKRPYRYWFLDW 250
Query: 455 NPE 463
NPE
Sbjct: 249 NPE 241
Score = 32.2 bits (64), Expect(3) = 1e-028
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / -1
Query: 533 HVMSSSWSKLPAAKEQDTSTPRHSSSK 613
HVMS+SW KLPAA+ S+ S++
Sbjct: 171 HVMSTSW*KLPAARATPASSSSSGSTE 91
Score = 26.7 bits (52), Expect(3) = 1e-028
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 176 CLGFQRME*VWKSAVG 223
C+GFQR +*V KS VG
Sbjct: 528 CVGFQRTD*V*KSPVG 481
>gb|CA019178.1|CA019178 HV11B18r HV Hordeum vulgare subsp. vulgare cDNA clone HV11B18
5-PRIME, mRNA sequence
Length = 532
Score = 264 bits (572), Expect = 3e-070
Identities = 98/135 (72%), Positives = 121/135 (89%)
Frame = -2 / +1
Query: 570 AAGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGN 391
AAG+ Q++DITWGDGRGK+L G LLTLSLDR SGSGFQS+++YL+G+ DMQ++LVPG+
Sbjct: 127 AAGNFYQDVDITWGDGRGKILGGGDLLTLSLDRASGSGFQSKNQYLYGRFDMQIKLVPGD 306
Query: 390 SAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTAD 211
SAGTV +YLSSQG AHDEIDFEFLGN S +PYT+HTNV+++G+G REQQFR+WFDPTAD
Sbjct: 307 SAGTVATFYLSSQGSAHDEIDFEFLGNASEQPYTVHTNVYSQGKGGREQQFRMWFDPTAD 486
Query: 210 FHTYSILWNPKHVIF 166
FHTYS+LWNP H++F
Sbjct: 487 FHTYSVLWNPTHILF 531
Score = 101 bits (216), Expect(3) = 9e-031
Identities = 45/63 (71%), Positives = 46/63 (73%)
Frame = +2 / -3
Query: 275 TLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRDW 454
TLVC+V*G LPRNSKSISSCA PCDDR* TVPAE PGTS CMS P RY DW
Sbjct: 422 TLVCTV*GCSLALPRNSKSISSCADPCDDR*KVATVPAESPGTSLICMSKRPYRYWFLDW 243
Query: 455 NPE 463
NPE
Sbjct: 242 NPE 234
Score = 37.3 bits (75), Expect(3) = 9e-031
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2 / -3
Query: 176 CLGFQRME*VWKSAVG 223
C+GFQR E*VWKSAVG
Sbjct: 521 CVGFQRTE*VWKSAVG 474
Score = 32.2 bits (64), Expect(3) = 9e-031
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2 / -3
Query: 533 HVMSSSWSKLPAAKEQDTSTPRHSSSK 613
HVMS+SW KLPAA+ S+ S++
Sbjct: 164 HVMSTSW*KLPAARATPASSSSSGSTE 84
>gb|AL500052.1|AL500052 AL500052 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04L04r 3', mRNA sequence
Length = 523
Score = 153 bits (329), Expect(5) = 4e-070
Identities = 61/73 (83%), Positives = 65/73 (89%)
Frame = -2 / -3
Query: 474 RTSGSGFQSRHEYLFGKIDMQLRLVPGNSAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEP 295
R+ GFQS+HEYLFGKIDMQL+LVPGNSAGTVTAYYLSSQG HDEIDFEFLGNV+GEP
Sbjct: 434 RSPAXGFQSKHEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNVTGEP 255
Query: 294 YTLHTNVFTRGQG 256
YTLHTNVF G G
Sbjct: 254 YTLHTNVFNAGAG 216
Score = 137 bits (293), Expect(4) = 2e-040
Identities = 57/64 (89%), Positives = 58/64 (90%)
Frame = +2 / +1
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
+NTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 229 LNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 408
Query: 449 DWNP 460
DWNP
Sbjct: 409 DWNP 420
Score = 63.8 bits (133), Expect(5) = 4e-070
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -2 / -3
Query: 189 WNPKHVIFMVDDMXIRDFXNLESKVVAFPR 100
WNPKH+IFMVDDM IRDF NLE K +AFP+
Sbjct: 146 WNPKHIIFMVDDMPIRDFKNLEGKGIAFPK 57
Score = 52.8 bits (109), Expect(5) = 4e-070
Identities = 18/24 (75%), Positives = 23/24 (95%)
Frame = -2 / -3
Query: 555 DQELDITWGDGRGKVLDNGRLLTL 484
D+E D+TWGDGRGK+L+NG+LLTL
Sbjct: 518 DKEFDVTWGDGRGKILNNGQLLTL 447
Score = 52.4 bits (108), Expect(6) = 8e-025
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -1 / -2
Query: 187 EPQARHLHGGRHAHQGLXQPGEQGGCVPK 101
EP+A HLHGGRHA QGL +PG +G VP+
Sbjct: 144 EPKAHHLHGGRHADQGLQEPGGEGDRVPQ 58
Score = 38.6 bits (78), Expect(6) = 8e-025
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -2 / -2
Query: 294 YTLHTNVFTRGQGQREQQFRLWFDPTADFHTYSILWNPK 178
+ H V RG+ +PT DFHTYSIL PK
Sbjct: 252 HAAHQRVQRRGRANGSNSSAFCLNPTNDFHTYSILLEPK 136
Score = 35.4 bits (71), Expect(5) = 4e-070
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -1 / -3
Query: 121 QGGCVPKSQXMXLYSSXLNADDW 53
+G PK+Q M LYSS NADDW
Sbjct: 77 KGIAFPKNQPMRLYSSLWNADDW 9
Score = 34.5 bits (69), Expect(5) = 4e-070
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -2 / -1
Query: 270 TRGQGQREQQFRLWFD 223
T+GQGQREQQFRL F+
Sbjct: 229 TQGQGQREQQFRLLFE 182
Score = 30.4 bits (60), Expect(6) = 8e-025
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -1 / -2
Query: 364 PVVAGXXXXXXXXRVPGQRVRRAL 293
PVVAG RVPGQR RRAL
Sbjct: 324 PVVAGADARRDRLRVPGQRHRRAL 253
Score = 29.5 bits (58), Expect(4) = 2e-040
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2 / +2
Query: 179 LGFQRME*VWKSAVG 223
LG +RME*VWKS VG
Sbjct: 137 LGSKRME*VWKSLVG 181
Score = 29.0 bits (57), Expect(6) = 8e-025
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / -2
Query: 104 QEPADAALLQXVERGRL 54
QEPA AALLQ +ER RL
Sbjct: 60 QEPAHAALLQPLERRRL 10
Score = 28.6 bits (56), Expect(4) = 2e-040
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3 / +1
Query: 54 QSSAFNXLE*SXIXWLLG 107
QSSAF LE*S + W LG
Sbjct: 10 QSSAFQRLE*SRMGWFLG 63
Score = 28.6 bits (56), Expect(6) = 8e-025
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -3 / -1
Query: 560 AWTRSWTSRGATGGARSLTTGGC*R 486
A TRS T G TG ARS TT *R
Sbjct: 523 ASTRSSTLPGVTGAARSSTTASS*R 449
Score = 26.3 bits (51), Expect(4) = 2e-040
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1 / +3
Query: 508 KDLAPPVAPRDVQLLVQ 558
+DLA PV P +V+LLV+
Sbjct: 471 EDLAAPVTPGNVELLVE 521
Score = 21.7 bits (41), Expect(6) = 8e-025
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3 / -1
Query: 305 PASPTRC 285
PASPTRC
Sbjct: 265 PASPTRC 245
>gb|CA007079.1|CA007079 HU06K21r HU Hordeum vulgare subsp. vulgare cDNA clone HU06K21
5-PRIME, mRNA sequence
Length = 574
Score = 263 bits (568), Expect = 1e-069
Identities = 102/131 (77%), Positives = 118/131 (90%)
Frame = -2 / +1
Query: 567 AGSLDQELDITWGDGRGKVLDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNS 388
AG+ Q+ +++WGDGRGKV+D GR L L+LD+TSGSGFQS+ EYLFGKIDMQ++LVPGNS
Sbjct: 181 AGNFFQDSEMSWGDGRGKVVDGGRGLDLTLDKTSGSGFQSKSEYLFGKIDMQIKLVPGNS 360
Query: 387 AGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADF 208
AGTVT +YLSSQG AHDEIDFEFLGNV+GEPYTLHTNVF +GQGQREQQFRLWFD T F
Sbjct: 361 AGTVTTFYLSSQGTAHDEIDFEFLGNVTGEPYTLHTNVFAQGQGQREQQFRLWFDXTKAF 540
Query: 207 HTYSILWNPKH 175
HTYSI+WNP+H
Sbjct: 541 HTYSIIWNPQH 573
Score = 126 bits (270), Expect(2) = 1e-031
Identities = 54/64 (84%), Positives = 54/64 (84%)
Frame = +2 / -3
Query: 272 NTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCRD 451
NTLVCSV*GSP TLPRNSKSISSCA PCDDR* VTVPAELPGTS CMSILP RYS D
Sbjct: 476 NTLVCSV*GSPVTLPRNSKSISSCAVPCDDR*KVVTVPAELPGTSLICMSILPKRYSLLD 297
Query: 452 WNPE 463
W PE
Sbjct: 296 WKPE 285
Score = 29.9 bits (59), Expect(2) = 1e-031
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2 / -3
Query: 176 CLGFQRME*VWKSAV 220
C GFQ ME*VWK+ V
Sbjct: 572 CCGFQMME*VWKALV 528
>gb|BI778475.2|BI778475 EBro07_SQ003_G13_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ003_G13 5', mRNA sequence
Length = 525
Score = 235 bits (507), Expect(2) = 1e-066
Identities = 91/117 (77%), Positives = 104/117 (88%)
Frame = -2 / +3
Query: 447 RHEYLFGKIDMQLRLVPGNSAGTVTAYYLSSQGGAHDEIDFEFLGNVSGEPYTLHTNVFT 268
+ EYLFGKIDMQ++LVPGNSAGTVT +YLSSQG AHDEIDFEFLGNV+GEPYTLHTNVF
Sbjct: 3 KSEYLFGKIDMQIKLVPGNSAGTVTTFYLSSQGTAHDEIDFEFLGNVTGEPYTLHTNVFA 182
Query: 267 RGQGQREQQFRLWFDPTADFHTYSILWNPKHVIFMVDDMXIRDFXNLESKVVAFPRA 97
+GQGQREQQFRLWFDPT FHTYSI+WNP+HVIF VD IRDF N E++ V+FP++
Sbjct: 183 QGQGQREQQFRLWFDPTKAFHTYSIIWNPQHVIFAVDGTAIRDFKNHEARGVSFPKS 353
Score = 114 bits (244), Expect(3) = 3e-032
Identities = 50/57 (87%), Positives = 50/57 (87%)
Frame = +2 / -3
Query: 272 NTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYS 442
NTLVCSV*GSP TLPRNSKSISSCA PCDDR* VTVPAELPGTS CMSILP RYS
Sbjct: 178 NTLVCSV*GSPVTLPRNSKSISSCAVPCDDR*KVVTVPAELPGTSLICMSILPKRYS 8
Score = 38.6 bits (78), Expect(2) = 1e-066
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -1 / +3
Query: 121 QGGCVPKSQXMXLYSSXLNADDWXXRAG 38
+G PKSQ M LY+S NADDW + G
Sbjct: 330 RGVSFPKSQPMRLYASLWNADDWATQGG 413
Score = 32.7 bits (65), Expect(3) = 3e-032
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 176 CLGFQRME*VWKSAVG 223
C GFQ ME*VWK+ VG
Sbjct: 274 CCGFQMME*VWKALVG 227
Score = 29.0 bits (57), Expect(3) = 3e-032
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / -3
Query: 39 PALXXQSSAFNXLE*SXIXWLLG 107
P QSSAF+ L S I WLLG
Sbjct: 412 PPCVAQSSAFHRLAYSRIGWLLG 344
>gb|BF627685.3|BF627685 HVSMEb0005I10f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005I10f, mRNA sequence
Length = 804
Score = 252 bits (545), Expect = 2e-066
Identities = 100/131 (76%), Positives = 116/131 (88%)
Frame = -2 / +1
Query: 510 LDNGRLLTLSLDRTSGSGFQSRHEYLFGKIDMQLRLVPGNSAGTVTAYYLSSQGGAHDEI 331
L+NG+LLTL LD+ SGSGFQS+HEYLFGKIDMQL+LVPGNSAGTVTAYYLSSQG HDEI
Sbjct: 1 LNNGQLLTLGLDKVSGSGFQSKHEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEI 180
Query: 330 DFEFLGNVSGEPYTLHTNVFTRGQGQREQQFRLWFDPTADFHTYSILWNPKHVIFMVDDM 151
DFEFLGNV+GEPYTLHTNVFT+GQGQREQQ+RLWFD T D HT +LWNPKH+ ++VD++
Sbjct: 181 DFEFLGNVTGEPYTLHTNVFTQGQGQREQQYRLWFDATND*HTCCMLWNPKHMKWVVDNV 360
Query: 150 XIRDFXNLESK 118
RD+ NL +
Sbjct: 361 PKRDYRNLRGE 393
Score = 140 bits (301), Expect = 7e-033
Identities = 59/65 (90%), Positives = 59/65 (90%)
Frame = +2 / -2
Query: 269 VNTLVCSV*GSPDTLPRNSKSISSCAPPCDDR**AVTVPAELPGTSRSCMSILPNRYSCR 448
VNTLVCSV*GSP TLPRNSKSISSC PCDDR**AVTVPAELPGTS SCMSILP RYSC
Sbjct: 242 VNTLVCSV*GSPVTLPRNSKSISSCVGPCDDR**AVTVPAELPGTSLSCMSILPKRYSCL 63
Query: 449 DWNPE 463
DWNPE
Sbjct: 62 DWNPE 48
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 258,735,893
Number of Sequences: 312970
Number of extensions: 3646845
Number of successful extensions: 49551
Number of sequences better than 1.0e-020: 221
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 8483341800
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)