TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204317.2.1
(607 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE601818.2|BE601818 HVSMEh0099K11f Hordeum vulgare 5-45 ... 249 1e-065
gb|BI951308.1|BI951308 HVSMEl0025H09f Hordeum vulgare spike... 249 1e-065
gb|BQ466282.1|BQ466282 HT02B16r HT Hordeum vulgare subsp. v... 249 1e-065
gb|BQ755347.1|BQ755347 EBed07_SQ002_J07_R endosperm, 28 DPA... 249 1e-065
gb|BU984559.1|BU984559 HF04E16r HF Hordeum vulgare subsp. v... 249 1e-065
gb|BU986792.1|BU986792 HF12O16r HF Hordeum vulgare subsp. v... 249 1e-065
gb|BE601810.2|BE601810 HVSMEh0099K03f Hordeum vulgare 5-45 ... 237 3e-062
gb|BJ467618.1|BJ467618 BJ467618 K. Sato unpublished cDNA li... 237 6e-062
gb|BI947748.1|BI947748 HVSMEl0006L16f Hordeum vulgare spike... 235 2e-061
gb|CK124362.1|CK124362 BES1824108i03 BES1824 Hordeum vulgar... 235 2e-061
gb|BE454083.2|BE454083 HVSMEh0080E16f Hordeum vulgare 5-45 ... 225 2e-058
gb|BQ659818.1|BQ659818 HF01M24w HF Hordeum vulgare subsp. v... 224 3e-058
gb|BE601804.3|BE601804 HVSMEh0099J17f Hordeum vulgare 5-45 ... 214 3e-055
gb|BE193330.2|BE193330 HVSMEh0080J19f Hordeum vulgare 5-45 ... 139 3e-054
gb|CB858437.1|CB858437 HI07A02w HI Hordeum vulgare subsp. v... 138 6e-053
gb|BJ467710.1|BJ467710 BJ467710 K. Sato unpublished cDNA li... 178 1e-048
gb|AV917900.1|AV917900 AV917900 K. Sato unpublished cDNA li... 178 1e-048
gb|AV917579.1|AV917579 AV917579 K. Sato unpublished cDNA li... 178 1e-048
gb|BJ468501.1|BJ468501 BJ468501 K. Sato unpublished cDNA li... 178 1e-048
gb|AV918128.1|AV918128 AV918128 K. Sato unpublished cDNA li... 178 1e-048
gb|AV918262.1|AV918262 AV918262 K. Sato unpublished cDNA li... 178 1e-048
gb|AV920604.1|AV920604 AV920604 K. Sato unpublished cDNA li... 178 1e-048
gb|BJ466393.1|BJ466393 BJ466393 K. Sato unpublished cDNA li... 178 1e-048
gb|CB880505.1|CB880505 HM06L21w HM Hordeum vulgare subsp. v... 178 1e-048
gb|BJ465763.1|BJ465763 BJ465763 K. Sato unpublished cDNA li... 178 1e-048
gb|AV918243.1|AV918243 AV918243 K. Sato unpublished cDNA li... 178 1e-048
gb|AV918260.1|AV918260 AV918260 K. Sato unpublished cDNA li... 178 1e-048
gb|AV919042.1|AV919042 AV919042 K. Sato unpublished cDNA li... 178 1e-048
gb|CA028155.1|CA028155 HZ61C14r HZ Hordeum vulgare subsp. v... 178 1e-048
gb|AV921410.1|AV921410 AV921410 K. Sato unpublished cDNA li... 178 1e-048
gb|BJ462494.1|BJ462494 BJ462494 K. Sato unpublished cDNA li... 133 2e-048
gb|BE422156.1|BE422156 HWM020cG.09r ITEC HWM Barley Leaf Li... 177 5e-048
gb|AV919161.1|AV919161 AV919161 K. Sato unpublished cDNA li... 175 1e-047
gb|BM375888.2|BM375888 EBem06_SQ004_L04_R embryo, 21 DPA, n... 175 2e-047
gb|BE196548.3|BE196548 HVSMEh0092J16f Hordeum vulgare 5-45 ... 145 1e-046
gb|BQ764256.1|BQ764256 EBan01_SQ005_G11_R anther, yellow st... 182 1e-045
gb|CV053661.1|CV053661 BNEL101g2 Barley EST endosperm libra... 180 7e-045
gb|BQ661453.1|BQ661453 HM03J01u HM Hordeum vulgare subsp. v... 166 9e-045
gb|BJ468274.1|BJ468274 BJ468274 K. Sato unpublished cDNA li... 166 9e-045
gb|BI949909.1|BI949909 HVSMEl0016O06f Hordeum vulgare spike... 179 1e-044
gb|CV059036.1|CV059036 BNEL43f6 Barley EST endosperm librar... 105 1e-044
gb|BI947342.1|BI947342 HVSMEl0005D04f Hordeum vulgare spike... 178 2e-044
gb|BU972640.1|BU972640 HB22E11r BC Hordeum vulgare subsp. v... 178 2e-044
gb|BQ469152.1|BQ469152 HM03J01r HM Hordeum vulgare subsp. v... 178 3e-044
gb|CB859019.1|CB859019 HI09A13w HI Hordeum vulgare subsp. v... 134 5e-044
gb|AV917200.1|AV917200 AV917200 K. Sato unpublished cDNA li... 177 7e-044
gb|BQ657405.1|BQ657405 HA08I10u HA Hordeum vulgare subsp. v... 171 4e-042
gb|AV913933.1|AV913933 AV913933 K. Sato unpublished cDNA li... 155 2e-041
gb|AV921547.1|AV921547 AV921547 K. Sato unpublished cDNA li... 155 2e-041
gb|BE420971.1|BE420971 HWM004.D12 ITEC HWM Barley Leaf Libr... 126 3e-041
gb|BM444610.1|BM444610 EBem09_SQ005_O09_R embryo, 1 Day ger... 151 2e-040
gb|BE195060.3|BE195060 HVSMEh0088D01f Hordeum vulgare 5-45 ... 118 3e-040
gb|BM100114.2|BM100114 EBma01_SQ001_D19_R maternal, 4 DPA, ... 92 7e-039
gb|BQ661086.1|BQ661086 HM01N16w HM Hordeum vulgare subsp. v... 159 1e-038
gb|BF261097.2|BF261097 HVSMEf0023M01f Hordeum vulgare seedl... 152 2e-036
gb|AV921892.1|AV921892 AV921892 K. Sato unpublished cDNA li... 135 1e-035
gb|BG367505.2|BG367505 HVSMEi0012I04f Hordeum vulgare 20 DA... 147 6e-035
gb|BM444609.1|BM444609 EBem09_SQ005_O07_R embryo, 1 Day ger... 87 1e-034
gb|BJ462547.1|BJ462547 BJ462547 K. Sato unpublished cDNA li... 138 8e-034
gb|BU976211.1|BU976211 HA03F10u HA Hordeum vulgare subsp. v... 140 7e-033
gb|BQ464272.1|BQ464272 HF01M24T HF Hordeum vulgare subsp. v... 139 1e-032
gb|BQ755335.1|BQ755335 EBed07_SQ002_G10_R endosperm, 28 DPA... 139 1e-032
gb|BU986160.1|BU986160 HF09N16r HF Hordeum vulgare subsp. v... 139 1e-032
gb|BE231065.1|BE231065 HVSMEg0016D19f Hordeum vulgare pre-a... 105 3e-032
gb|CV054913.1|CV054913 BNEL114f9 Barley EST endosperm libra... 122 9e-032
gb|BG418369.2|BG418369 HVSMEk0022H13f Hordeum vulgare testa... 134 3e-031
gb|BU986567.1|BU986567 HF12E04r HF Hordeum vulgare subsp. v... 132 2e-030
gb|BI948619.1|BI948619 HVSMEl0010E10f Hordeum vulgare spike... 132 2e-030
gb|BQ465020.1|BQ465020 HU02G21r HU Hordeum vulgare subsp. v... 129 1e-029
gb|CA023147.1|CA023147 HZ45F22r HZ Hordeum vulgare subsp. v... 73 1e-028
gb|BG344496.1|BG344496 HVSMEg0009H02f Hordeum vulgare pre-a... 110 4e-028
gb|BG415057.1|BG415057 HVSMEk0004O20f Hordeum vulgare testa... 124 5e-028
gb|AJ433290.1|AJ433290 AJ433290 S00002 Hordeum vulgare subs... 109 6e-028
gb|AL509490.1|AL509490 AL509490 Hordeum vulgare Barke devel... 109 8e-028
gb|AV916876.1|AV916876 AV916876 K. Sato unpublished cDNA li... 122 2e-027
gb|AV922174.1|AV922174 AV922174 K. Sato unpublished cDNA li... 122 2e-027
gb|BM100134.2|BM100134 EBma01_SQ001_E17_R maternal, 4 DPA, ... 122 2e-027
gb|CA028544.1|CA028544 HZ62G02r HZ Hordeum vulgare subsp. v... 122 2e-027
gb|AL505468.1|AL505468 AL505468 Hordeum vulgare Barke roots... 68 1e-026
gb|BE601859.2|BE601859 HVSMEh0099M17f Hordeum vulgare 5-45 ... 118 2e-026
gb|BQ663387.1|BQ663387 HU02G21u HU Hordeum vulgare subsp. v... 118 2e-026
gb|BM441741.2|BM441741 EBed07_SQ001_G19_R endosperm, 28 DPA... 118 2e-026
gb|CA010249.1|CA010249 HT11B14u HT Hordeum vulgare subsp. v... 118 2e-026
gb|BU977487.1|BU977487 HA11I05r HA Hordeum vulgare subsp. v... 75 3e-026
gb|BE420576.1|BE420576 HWM000.D01 ITEC HWM Barley Leaf Libr... 116 4e-026
gb|BF623927.2|BF623927 HVSMEa0007M14f Hordeum vulgare seedl... 84 6e-026
gb|CA027495.1|CA027495 HZ59B20r HZ Hordeum vulgare subsp. v... 115 3e-025
gb|BJ466112.1|BJ466112 BJ466112 K. Sato unpublished cDNA li... 114 4e-025
gb|AV918859.1|AV918859 AV918859 K. Sato unpublished cDNA li... 89 6e-025
gb|AV915968.1|AV915968 AV915968 K. Sato unpublished cDNA li... 105 2e-023
gb|BM373002.2|BM373002 EBma04_SQ002_L05_R maternal, 10 DPA,... 66 2e-023
gb|AV920097.1|AV920097 AV920097 K. Sato unpublished cDNA li... 93 6e-022
gb|CB880520.1|CB880520 HM06M21w HM Hordeum vulgare subsp. v... 89 7e-022
gb|AL502045.1|AL502045 AL502045 Hordeum vulgare Barke roots... 89 7e-022
gb|BM441944.2|BM441944 EBed07_SQ001_P23_R endosperm, 28 DPA... 102 2e-021
gb|BQ472448.1|BQ472448 HB09J14T BC Hordeum vulgare subsp. v... 75 4e-021
gb|BU968461.1|BU968461 HB07J14r BC Hordeum vulgare subsp. v... 75 4e-021
gb|BU968389.1|BU968389 HB07F20r BC Hordeum vulgare subsp. v... 75 4e-021
gb|BQ764858.1|BQ764858 EBca01_SQ005_H06_R carpel, pre-anthe... 87 4e-021
gb|BQ472509.1|BQ472509 HB09F20T BC Hordeum vulgare subsp. v... 75 5e-021
gb|BU989213.1|BU989213 HF21B21r HF Hordeum vulgare subsp. v... 100 1e-020
>gb|BE601818.2|BE601818 HVSMEh0099K11f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099K11f, mRNA sequence
Length = 503
Score = 249 bits (538), Expect = 1e-065
Identities = 95/139 (68%), Positives = 110/139 (79%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W FVYER+GVPIGPRANSDWLYIVPWG+ KAVTYVKE+YGNPTM+LSENGMD PGNV+
Sbjct: 40 WHVGFVYERNGVPIGPRANSDWLYIVPWGMNKAVTYVKERYGNPTMILSENGMDQPGNVS 219
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+A G ELK AID GA GYFAWSLLDNFEW+LGYT+RFG+VYVDF
Sbjct: 220 IADGVHDTVRIRYYRDYITELKKAIDNGARVAGYFAWSLLDNFEWRLGYTARFGIVYVDF 399
Query: 246 RTLRRYPKSSAYWFRDVIA 190
TL+RYPK SA WF+++++
Sbjct: 400 NTLKRYPKDSALWFKNMLS 456
Score = 168 bits (361), Expect = 3e-041
Identities = 87/131 (66%), Positives = 90/131 (68%)
Frame = +2 / -1
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VLKST*T P R V PS HSKLSS DQAKYP AP SIA SS *
Sbjct: 443 LNHKAESLGYLFRVLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*S 264
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
* L S TP A +T PG SIPFS+ IVG PY SLT*VTAL+ P GTM*SQSEFA G
Sbjct: 263 L*YRILTVSCTPSAMLTFPGWSIPFSESIIVGFPYLSLT*VTALFIPHGTM*SQSEFARG 84
Query: 563 PIGTPSRS*TN 595
PIGTP RS*TN
Sbjct: 83 PIGTPFRS*TN 51
Score = 128 bits (275), Expect = 2e-029
Identities = 60/144 (41%), Positives = 87/144 (60%)
Frame = +1 / -3
Query: 175 ISVAAGDDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVD 354
+S G+ + EP LGV + EV +D+AE G V + PLEVV+QRP +V GA V
Sbjct: 471 LSFFFGEHVLEPQG*VLGVPLQSIEVHIDDAETGSVAESPLEVVKQRPSKVPSHSGAIVY 292
Query: 355 RRLQLGDVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHD 534
R L+LG V VV P V H + D++ +VH++ + HR +++ ++G V SPRH+
Sbjct: 291 RLLELGYVVSVVPDPYCVVHTVSDADISWLVHSIFRKYHRRISISFFNIGHSLVHSPRHN 112
Query: 535 VEPV*VRPWSNRHTVAFIDELRGP 606
V+PV V SNRHT++FID+ P
Sbjct: 111 VKPVGVCTRSNRHTISFIDKPNMP 40
>gb|BI951308.1|BI951308 HVSMEl0025H09f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0025H09f, mRNA sequence
Length = 565
Score = 249 bits (538), Expect = 1e-065
Identities = 95/139 (68%), Positives = 110/139 (79%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W FVYER+GVPIGPRANSDWLYIVPWG+ KAVTYVKE+YGNPTM+LSENGMD PGNV+
Sbjct: 25 WHVGFVYERNGVPIGPRANSDWLYIVPWGMNKAVTYVKERYGNPTMILSENGMDQPGNVS 204
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+A G ELK AID GA GYFAWSLLDNFEW+LGYT+RFG+VYVDF
Sbjct: 205 IADGVHDTVRIRYYRDYITELKKAIDNGARVAGYFAWSLLDNFEWRLGYTARFGIVYVDF 384
Query: 246 RTLRRYPKSSAYWFRDVIA 190
TL+RYPK SA WF+++++
Sbjct: 385 NTLKRYPKDSALWFKNMLS 441
Score = 168 bits (361), Expect = 3e-041
Identities = 87/131 (66%), Positives = 90/131 (68%)
Frame = +2 / -3
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VLKST*T P R V PS HSKLSS DQAKYP AP SIA SS *
Sbjct: 428 LNHKAESLGYLFRVLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*S 249
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
* L S TP A +T PG SIPFS+ IVG PY SLT*VTAL+ P GTM*SQSEFA G
Sbjct: 248 L*YRILTVSCTPSAMLTFPGWSIPFSESIIVGFPYLSLT*VTALFIPHGTM*SQSEFARG 69
Query: 563 PIGTPSRS*TN 595
PIGTP RS*TN
Sbjct: 68 PIGTPFRS*TN 36
Score = 129 bits (276), Expect = 1e-029
Identities = 61/153 (39%), Positives = 90/153 (58%)
Frame = +1 / -2
Query: 148 SDRLRPPYVISVAAGDDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEV 327
S R+ + + G+ + EP LGV + EV +D+AE G V + PLEVV+QRP +V
Sbjct: 483 SSRILFAIIAPLLFGEHVLEPQG*VLGVPLQSIEVHIDDAETGSVAESPLEVVKQRPSKV 304
Query: 328 SHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGD 507
GA V R L+LG V VV P V H + D++ +VH++ + HR +++ ++G
Sbjct: 303 PSHSGAIVYRLLELGYVVSVVPDPYCVVHTVSDADISWLVHSIFRKYHRRISISFFNIGH 124
Query: 508 GFVQSPRHDVEPV*VRPWSNRHTVAFIDELRGP 606
V SPRH+V+PV V SNRHT++FID+ P
Sbjct: 123 SLVHSPRHNVKPVGVCTRSNRHTISFIDKPNMP 25
>gb|BQ466282.1|BQ466282 HT02B16r HT Hordeum vulgare subsp. vulgare cDNA clone HT02B16
5-PRIME, mRNA sequence
Length = 611
Score = 249 bits (538), Expect = 1e-065
Identities = 95/139 (68%), Positives = 110/139 (79%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W FVYER+GVPIGPRANSDWLYIVPWG+ KAVTYVKE+YGNPTM+LSENGMD PGNV+
Sbjct: 16 WHVGFVYERNGVPIGPRANSDWLYIVPWGMNKAVTYVKERYGNPTMILSENGMDQPGNVS 195
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+A G ELK AID GA GYFAWSLLDNFEW+LGYT+RFG+VYVDF
Sbjct: 196 IADGVHDTVRIRYYRDYITELKKAIDNGARVAGYFAWSLLDNFEWRLGYTARFGIVYVDF 375
Query: 246 RTLRRYPKSSAYWFRDVIA 190
TL+RYPK SA WF+++++
Sbjct: 376 NTLKRYPKDSALWFKNMLS 432
Score = 168 bits (361), Expect = 3e-041
Identities = 87/131 (66%), Positives = 90/131 (68%)
Frame = +2 / -1
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VLKST*T P R V PS HSKLSS DQAKYP AP SIA SS *
Sbjct: 419 LNHKAESLGYLFRVLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*S 240
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
* L S TP A +T PG SIPFS+ IVG PY SLT*VTAL+ P GTM*SQSEFA G
Sbjct: 239 L*YRILTVSCTPSAMLTFPGWSIPFSESIIVGFPYLSLT*VTALFIPHGTM*SQSEFARG 60
Query: 563 PIGTPSRS*TN 595
PIGTP RS*TN
Sbjct: 59 PIGTPFRS*TN 27
Score = 128 bits (274), Expect = 3e-029
Identities = 59/139 (42%), Positives = 85/139 (61%)
Frame = +1 / -3
Query: 190 GDDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQL 369
G+ + EP LGV + EV +D+AE G V + PLEVV+QRP +V GA V R L+L
Sbjct: 432 GEHVLEPQG*VLGVPLQSIEVHIDDAETGSVAESPLEVVKQRPSKVPSHSGAIVYRLLEL 253
Query: 370 GDVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV* 549
G V VV P V H + D++ +VH++ + HR +++ ++G V SPRH+V+PV
Sbjct: 252 GYVVSVVPDPYCVVHTVSDADISWLVHSIFRKYHRRISISFFNIGHSLVHSPRHNVKPVG 73
Query: 550 VRPWSNRHTVAFIDELRGP 606
V SNRHT++FID+ P
Sbjct: 72 VCTRSNRHTISFIDKPNMP 16
>gb|BQ755347.1|BQ755347 EBed07_SQ002_J07_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ002_J07 5', mRNA sequence
Length = 642
Score = 249 bits (538), Expect = 1e-065
Identities = 95/139 (68%), Positives = 110/139 (79%)
Frame = -2 / +3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W FVYER+GVPIGPRANSDWLYIVPWG+ KAVTYVKE+YGNPTM+LSENGMD PGNV+
Sbjct: 132 WHVGFVYERNGVPIGPRANSDWLYIVPWGMNKAVTYVKERYGNPTMILSENGMDQPGNVS 311
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+A G ELK AID GA GYFAWSLLDNFEW+LGYT+RFG+VYVDF
Sbjct: 312 IADGVHDTVRIRYYRDYITELKKAIDNGARVAGYFAWSLLDNFEWRLGYTARFGIVYVDF 491
Query: 246 RTLRRYPKSSAYWFRDVIA 190
TL+RYPK SA WF+++++
Sbjct: 492 NTLKRYPKDSALWFKNMLS 548
Score = 168 bits (361), Expect = 3e-041
Identities = 87/131 (66%), Positives = 90/131 (68%)
Frame = +2 / -3
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VLKST*T P R V PS HSKLSS DQAKYP AP SIA SS *
Sbjct: 535 LNHKAESLGYLFRVLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*S 356
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
* L S TP A +T PG SIPFS+ IVG PY SLT*VTAL+ P GTM*SQSEFA G
Sbjct: 355 L*YRILTVSCTPSAMLTFPGWSIPFSESIIVGFPYLSLT*VTALFIPHGTM*SQSEFARG 176
Query: 563 PIGTPSRS*TN 595
PIGTP RS*TN
Sbjct: 175 PIGTPFRS*TN 143
Score = 128 bits (274), Expect = 3e-029
Identities = 59/139 (42%), Positives = 85/139 (61%)
Frame = +1 / -2
Query: 190 GDDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQL 369
G+ + EP LGV + EV +D+AE G V + PLEVV+QRP +V GA V R L+L
Sbjct: 548 GEHVLEPQG*VLGVPLQSIEVHIDDAETGSVAESPLEVVKQRPSKVPSHSGAIVYRLLEL 369
Query: 370 GDVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV* 549
G V VV P V H + D++ +VH++ + HR +++ ++G V SPRH+V+PV
Sbjct: 368 GYVVSVVPDPYCVVHTVSDADISWLVHSIFRKYHRRISISFFNIGHSLVHSPRHNVKPVG 189
Query: 550 VRPWSNRHTVAFIDELRGP 606
V SNRHT++FID+ P
Sbjct: 188 VCTRSNRHTISFIDKPNMP 132
>gb|BU984559.1|BU984559 HF04E16r HF Hordeum vulgare subsp. vulgare cDNA clone HF04E16
5-PRIME, mRNA sequence
Length = 590
Score = 249 bits (538), Expect = 1e-065
Identities = 95/139 (68%), Positives = 110/139 (79%)
Frame = -2 / +2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W FVYER+GVPIGPRANSDWLYIVPWG+ KAVTYVKE+YGNPTM+LSENGMD PGNV+
Sbjct: 98 WHVGFVYERNGVPIGPRANSDWLYIVPWGMNKAVTYVKERYGNPTMILSENGMDQPGNVS 277
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+A G ELK AID GA GYFAWSLLDNFEW+LGYT+RFG+VYVDF
Sbjct: 278 IADGVHDTVRIRYYRDYITELKKAIDNGARVAGYFAWSLLDNFEWRLGYTARFGIVYVDF 457
Query: 246 RTLRRYPKSSAYWFRDVIA 190
TL+RYPK SA WF+++++
Sbjct: 458 NTLKRYPKDSALWFKNMLS 514
Score = 168 bits (361), Expect = 3e-041
Identities = 87/131 (66%), Positives = 90/131 (68%)
Frame = +2 / -3
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VLKST*T P R V PS HSKLSS DQAKYP AP SIA SS *
Sbjct: 501 LNHKAESLGYLFRVLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*S 322
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
* L S TP A +T PG SIPFS+ IVG PY SLT*VTAL+ P GTM*SQSEFA G
Sbjct: 321 L*YRILTVSCTPSAMLTFPGWSIPFSESIIVGFPYLSLT*VTALFIPHGTM*SQSEFARG 142
Query: 563 PIGTPSRS*TN 595
PIGTP RS*TN
Sbjct: 141 PIGTPFRS*TN 109
Score = 128 bits (274), Expect = 3e-029
Identities = 59/139 (42%), Positives = 85/139 (61%)
Frame = +1 / -2
Query: 190 GDDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQL 369
G+ + EP LGV + EV +D+AE G V + PLEVV+QRP +V GA V R L+L
Sbjct: 514 GEHVLEPQG*VLGVPLQSIEVHIDDAETGSVAESPLEVVKQRPSKVPSHSGAIVYRLLEL 335
Query: 370 GDVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV* 549
G V VV P V H + D++ +VH++ + HR +++ ++G V SPRH+V+PV
Sbjct: 334 GYVVSVVPDPYCVVHTVSDADISWLVHSIFRKYHRRISISFFNIGHSLVHSPRHNVKPVG 155
Query: 550 VRPWSNRHTVAFIDELRGP 606
V SNRHT++FID+ P
Sbjct: 154 VCTRSNRHTISFIDKPNMP 98
>gb|BU986792.1|BU986792 HF12O16r HF Hordeum vulgare subsp. vulgare cDNA clone HF12O16
5-PRIME, mRNA sequence
Length = 615
Score = 249 bits (538), Expect = 1e-065
Identities = 95/139 (68%), Positives = 110/139 (79%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W FVYER+GVPIGPRANSDWLYIVPWG+ KAVTYVKE+YGNPTM+LSENGMD PGNV+
Sbjct: 142 WHVGFVYERNGVPIGPRANSDWLYIVPWGMNKAVTYVKERYGNPTMILSENGMDQPGNVS 321
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+A G ELK AID GA GYFAWSLLDNFEW+LGYT+RFG+VYVDF
Sbjct: 322 IADGVHDTVRIRYYRDYITELKKAIDNGARVAGYFAWSLLDNFEWRLGYTARFGIVYVDF 501
Query: 246 RTLRRYPKSSAYWFRDVIA 190
TL+RYPK SA WF+++++
Sbjct: 502 NTLKRYPKDSALWFKNMLS 558
Score = 168 bits (361), Expect = 3e-041
Identities = 87/131 (66%), Positives = 90/131 (68%)
Frame = +2 / -2
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VLKST*T P R V PS HSKLSS DQAKYP AP SIA SS *
Sbjct: 545 LNHKAESLGYLFRVLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*S 366
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
* L S TP A +T PG SIPFS+ IVG PY SLT*VTAL+ P GTM*SQSEFA G
Sbjct: 365 L*YRILTVSCTPSAMLTFPGWSIPFSESIIVGFPYLSLT*VTALFIPHGTM*SQSEFARG 186
Query: 563 PIGTPSRS*TN 595
PIGTP RS*TN
Sbjct: 185 PIGTPFRS*TN 153
Score = 128 bits (274), Expect = 3e-029
Identities = 59/139 (42%), Positives = 85/139 (61%)
Frame = +1 / -1
Query: 190 GDDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQL 369
G+ + EP LGV + EV +D+AE G V + PLEVV+QRP +V GA V R L+L
Sbjct: 558 GEHVLEPQG*VLGVPLQSIEVHIDDAETGSVAESPLEVVKQRPSKVPSHSGAIVYRLLEL 379
Query: 370 GDVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV* 549
G V VV P V H + D++ +VH++ + HR +++ ++G V SPRH+V+PV
Sbjct: 378 GYVVSVVPDPYCVVHTVSDADISWLVHSIFRKYHRRISISFFNIGHSLVHSPRHNVKPVG 199
Query: 550 VRPWSNRHTVAFIDELRGP 606
V SNRHT++FID+ P
Sbjct: 198 VCTRSNRHTISFIDKPNMP 142
>gb|BE601810.2|BE601810 HVSMEh0099K03f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099K03f, mRNA sequence
Length = 499
Score = 237 bits (513), Expect = 3e-062
Identities = 92/139 (66%), Positives = 107/139 (76%)
Frame = -2 / +3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W FVYER+GVPIGPRANSDWLYIVPWG+ KA TYVKE+YGNPTM+LSENGMD PGNV+
Sbjct: 39 WHVGFVYERNGVPIGPRANSDWLYIVPWGMNKAATYVKERYGNPTMILSENGMDQPGNVS 218
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+A G ELK AID GA GYFAWSLLDNFEW+LGYT+RFG+ YVDF
Sbjct: 219 IADGVHDTVRIRYYRDYITELKKAIDNGARVAGYFAWSLLDNFEWRLGYTARFGIDYVDF 398
Query: 246 RTLRRYPKSSAYWFRDVIA 190
TL+RYPK SA F+++++
Sbjct: 399 NTLKRYPKDSALRFKNMLS 455
Score = 163 bits (350), Expect = 9e-040
Identities = 85/131 (64%), Positives = 89/131 (67%)
Frame = +2 / -1
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VLKST*+ P R V PS HSKLSS DQAKYP AP SIA SS *
Sbjct: 442 LNLKAESLGYLFRVLKST*SMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*S 263
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
* L S TP A +T PG SIPFS+ IVG PY SLT*V AL+ P GTM*SQSEFA G
Sbjct: 262 L*YRILTVSCTPSAMLTFPGWSIPFSESIIVGFPYLSLT*VAALFIPHGTM*SQSEFARG 83
Query: 563 PIGTPSRS*TN 595
PIGTP RS*TN
Sbjct: 82 PIGTPFRS*TN 50
Score = 123 bits (264), Expect = 7e-028
Identities = 58/139 (41%), Positives = 84/139 (60%)
Frame = +1 / -3
Query: 190 GDDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQL 369
G+ + EP LGV + EV + +AE G V + PLEVV+QRP +V GA V R L+L
Sbjct: 455 GEHVLEPQG*VLGVPLQSIEVHIVDAETGSVAESPLEVVKQRPSKVPSHSGAIVYRLLEL 276
Query: 370 GDVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV* 549
G V VV P V H + D++ +VH++ + HR +++ ++G V SPRH+V+PV
Sbjct: 275 GYVVSVVPDPYCVVHTVSDADISWLVHSIFRKYHRRISISFFNIGRSLVHSPRHNVKPVG 96
Query: 550 VRPWSNRHTVAFIDELRGP 606
V SNRHT++FID+ P
Sbjct: 95 VCTRSNRHTISFIDKPNMP 39
>gb|BJ467618.1|BJ467618 BJ467618 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29b06 3', mRNA sequence
Length = 709
Score = 237 bits (511), Expect = 6e-062
Identities = 88/138 (63%), Positives = 108/138 (78%)
Frame = -2 / -2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W +F+YER+GVPIG ANS WLYIVPWG+ KAVTYVKE+YGNPTM+L+ENGMD PGNV+
Sbjct: 567 WHVEFIYERNGVPIGAHANSYWLYIVPWGINKAVTYVKERYGNPTMILAENGMDQPGNVS 388
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+ G ELK AID GA +GYFAWSLLDNFEW+LGYT+RFG+VYVD+
Sbjct: 387 ITDGVQDTVRVRYYRDYITELKKAIDDGARVIGYFAWSLLDNFEWRLGYTARFGIVYVDY 208
Query: 246 RTLRRYPKSSAYWFRDVI 193
+TL+RYPK SA WF++++
Sbjct: 207 KTLKRYPKDSALWFKNML 154
Score = 154 bits (331), Expect = 4e-037
Identities = 84/131 (64%), Positives = 85/131 (64%)
Frame = +2 / +2
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VL ST*T P R V PS HSKLSS DQAKYP AP SIA SS *
Sbjct: 164 LNHNAESLGYLFRVL*ST*TIPKRAV*PSLHSKLSSRDQAKYPITRAPSSIAFLSSVM*S 343
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
* TL S TP +T PG SIPFS R IVG PY SLT*VTAL P GTM*SQ EFA
Sbjct: 344 L*YRTLTVSCTPSVMLTFPGWSIPFSARIIVGFPYLSLT*VTALLIPHGTM*SQ*EFAWA 523
Query: 563 PIGTPSRS*TN 595
PIGTP RS* N
Sbjct: 524 PIGTPLRS*IN 556
>gb|BI947748.1|BI947748 HVSMEl0006L16f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0006L16f, mRNA sequence
Length = 833
Score = 235 bits (507), Expect = 2e-061
Identities = 90/134 (67%), Positives = 105/134 (78%)
Frame = -2 / -3
Query: 591 VYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGX 412
VYER+GVPIG RANSDW YIVPWG+ KAVTYVKE+YGNP M+LSENGMD PGNV++A G
Sbjct: 750 VYERNGVPIGLRANSDWFYIVPWGMNKAVTYVKERYGNPPMILSENGMDQPGNVSIADGV 571
Query: 411 XXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRR 232
ELK AID GA GYFAWSLLDNFEW+LGYT+RFG+VYVDF TL+R
Sbjct: 570 HDTVRIRYYRDYITELKKAIDNGARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFNTLKR 391
Query: 231 YPKSSAYWFRDVIA 190
YPK SA WF+++++
Sbjct: 390 YPKDSALWFKNMLS 349
Score = 157 bits (337), Expect = 6e-038
Identities = 83/130 (63%), Positives = 87/130 (66%)
Frame = +2 / +2
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VLKST*T P R V PS HSKLSS DQAKYP AP SIA SS *
Sbjct: 362 LNHKAESLGYLFRVLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*S 541
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
* L S TP A +T PG SIPFS+ I G PY SLT*VTAL+ P GTM*+QSEFA
Sbjct: 542 L*YRILTVSCTPSAMLTFPGWSIPFSESIIGGFPYLSLT*VTALFIPHGTM*NQSEFARR 721
Query: 563 PIGTPSRS*T 592
PIGTP RS*T
Sbjct: 722 PIGTPFRS*T 751
Score = 121 bits (259), Expect = 3e-027
Identities = 57/138 (41%), Positives = 82/138 (59%)
Frame = +1 / +1
Query: 190 GDDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQL 369
G + EP LGV + EV +D+AE G V + PLEVV+QRP +V GA V R L+L
Sbjct: 349 GKHVLEPQG*VLGVPLQSIEVHIDDAETGSVAESPLEVVKQRPSKVPSHSGAIVYRLLEL 528
Query: 370 GDVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV* 549
G V VV P V H + D++ +VH++ + HR +++ ++G V SPRH+V+PV
Sbjct: 529 GYVVSVVPDPYCVVHTVSDADISWLVHSIFRKYHRRISISFFNIGHSLVHSPRHNVKPVG 708
Query: 550 VRPWSNRHTVAFIDELRG 603
V +N HT++FID G
Sbjct: 709 VCTKANWHTISFIDTPTG 762
>gb|CK124362.1|CK124362 BES1824108i03 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010I038 5-PRIME, mRNA sequence
Length = 655
Score = 235 bits (507), Expect = 2e-061
Identities = 91/128 (71%), Positives = 101/128 (78%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W FVYER+GVPIGPRANSDWLYIVPWG+ KAVTYVKE+YGNPTM+LSENGMD PGNV+
Sbjct: 67 WHVGFVYERNGVPIGPRANSDWLYIVPWGMNKAVTYVKERYGNPTMILSENGMDQPGNVS 246
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
+A G ELK AID GA GYFAWSLLDNFEW+LGYT+RFG+VYVDF
Sbjct: 247 IADGVHDTVRIRYYRDYITELKKAIDNGARVAGYFAWSLLDNFEWRLGYTARFGIVYVDF 426
Query: 246 RTLRRYPK 223
TL+RYPK
Sbjct: 427 NTLKRYPK 450
Score = 161 bits (346), Expect = 3e-039
Identities = 81/118 (68%), Positives = 84/118 (71%)
Frame = +2 / -3
Query: 242 VLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASRTPW 421
VLKST*T P R V PS HSKLSS DQAKYP AP SIA SS * * L S TP
Sbjct: 431 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*SL*YRILTVSCTPS 252
Query: 422 ATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTPSRS*TN 595
A +T PG SIPFS+ IVG PY SLT*VTAL+ P GTM*SQSEFA GPIGTP RS*TN
Sbjct: 251 AMLTFPGWSIPFSESIIVGFPYLSLT*VTALFIPHGTM*SQSEFARGPIGTPFRS*TN 78
Score = 123 bits (264), Expect = 7e-028
Identities = 56/129 (43%), Positives = 81/129 (62%)
Frame = +1 / -2
Query: 220 ALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHP 399
+LGV + EV +D+AE G V + PLEVV+QRP +V GA V R L+LG V VV P
Sbjct: 453 SLGVPLQSIEVHIDDAETGSVAESPLEVVKQRPSKVPSHSGAIVYRLLELGYVVSVVPDP 274
Query: 400 RRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTV 579
V H + D++ +VH++ + HR +++ ++G V SPRH+V+PV V SNRHT+
Sbjct: 273 YCVVHTVSDADISWLVHSIFRKYHRRISISFFNIGHSLVHSPRHNVKPVGVCTRSNRHTI 94
Query: 580 AFIDELRGP 606
+FID+ P
Sbjct: 93 SFIDKPNMP 67
>gb|BE454083.2|BE454083 HVSMEh0080E16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0080E16f, mRNA sequence
Length = 713
Score = 225 bits (486), Expect = 2e-058
Identities = 86/127 (67%), Positives = 100/127 (78%)
Frame = -2 / +2
Query: 570 PIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXX 391
PIGPRANSDWLYIVPWG+ KAVTYVKE+YGNPTM+LSENGMD PGNV++A G
Sbjct: 2 PIGPRANSDWLYIVPWGMNKAVTYVKERYGNPTMILSENGMDQPGNVSIADGVHDTVRIR 181
Query: 390 XXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAY 211
ELK AID GA GYFAWSLLDNFEW+LGYT+RFG+VYV F TL+RYPK SA
Sbjct: 182 YYRDYITELKKAIDNGARVAGYFAWSLLDNFEWRLGYTARFGIVYVYFNTLKRYPKDSAL 361
Query: 210 WFRDVIA 190
WF+++++
Sbjct: 362 WFKNMLS 382
Score = 151 bits (324), Expect = 3e-036
Identities = 79/123 (64%), Positives = 82/123 (66%)
Frame = +2 / -3
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VLK T*T P R V PS HSKLSS DQAKYP AP SIA SS *
Sbjct: 369 LNHKAESLGYLFRVLKYT*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*S 190
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
* L S TP A +T PG SIPFS+ IVG PY SLT*VTAL+ P GTM*SQSEFA G
Sbjct: 189 L*YRILTVSCTPSAMLTFPGWSIPFSESIIVGFPYLSLT*VTALFIPHGTM*SQSEFARG 10
Query: 563 PIG 571
PIG
Sbjct: 9 PIG 1
Score = 112 bits (239), Expect = 2e-024
Identities = 53/127 (41%), Positives = 76/127 (59%)
Frame = +1 / -2
Query: 190 GDDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQL 369
G+ + EP LGV + EV +D+AE G V + PLEVV+QRP +V GA V R L+L
Sbjct: 382 GEHVLEPQG*VLGVPLQSIEVHIDDAETGSVAESPLEVVKQRPSKVPSHSGAIVYRLLEL 203
Query: 370 GDVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV* 549
G V VV P V H + D++ +VH++ + HR +++ ++G V SPRH+V+PV
Sbjct: 202 GYVVSVVPDPYCVVHTVSDADISWLVHSIFRKYHRRISISFFNIGHSLVHSPRHNVKPVG 23
Query: 550 VRPWSNR 570
V SNR
Sbjct: 22 VCTRSNR 2
>gb|BQ659818.1|BQ659818 HF01M24w HF Hordeum vulgare subsp. vulgare cDNA clone HF01M24
3-PRIME, mRNA sequence
Length = 681
Score = 224 bits (484), Expect = 3e-058
Identities = 85/125 (68%), Positives = 99/125 (79%)
Frame = -2 / -1
Query: 564 GPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXX 385
GPRANSDWLYIVPWG+ KAVTYVKE+YGNPTM+LSENGMD PGNV++A G
Sbjct: 681 GPRANSDWLYIVPWGMNKAVTYVKERYGNPTMILSENGMDQPGNVSIADGVHDTVRIRYY 502
Query: 384 XXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWF 205
ELK AID GA GYFAWSLLDNFEW+LGYT+RFG+VYVDF TL+RYPK SA WF
Sbjct: 501 RDYITELKKAIDNGARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFNTLKRYPKDSALWF 322
Query: 204 RDVIA 190
+++++
Sbjct: 321 KNMLS 307
Score = 146 bits (313), Expect = 1e-034
Identities = 77/120 (64%), Positives = 80/120 (66%)
Frame = +2 / +2
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VLKST*T P R V PS HSKLSS DQAKYP AP SIA SS *
Sbjct: 320 LNHKAESLGYLFRVLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*S 499
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
* L S TP A +T PG SIPFS+ IVG PY SLT*VTAL+ P GTM*SQSEFA G
Sbjct: 500 L*YRILTVSCTPSAMLTFPGWSIPFSESIIVGFPYLSLT*VTALFIPHGTM*SQSEFARG 679
Score = 108 bits (231), Expect = 2e-023
Identities = 49/119 (41%), Positives = 72/119 (60%)
Frame = +1 / +1
Query: 190 GDDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQL 369
G+ + EP LGV + EV +D+AE G V + PLEVV+QRP +V GA V R L+L
Sbjct: 307 GEHVLEPQG*VLGVPLQSIEVHIDDAETGSVAESPLEVVKQRPSKVPSHSGAIVYRLLEL 486
Query: 370 GDVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV 546
G V VV P V H + D++ +VH++ + HR +++ ++G V SPRH+V+PV
Sbjct: 487 GYVVSVVPDPYCVVHTVSDADISWLVHSIFRKYHRRISISFFNIGHSLVHSPRHNVKPV 663
>gb|BE601804.3|BE601804 HVSMEh0099J17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099J17f, mRNA sequence
Length = 627
Score = 214 bits (462), Expect = 3e-055
Identities = 81/121 (66%), Positives = 95/121 (78%)
Frame = -2 / +2
Query: 552 NSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXX 373
NSDWLYIVPWG+ KAVTYVKE+YGNPTM+LSENGMD PGNV++A G
Sbjct: 2 NSDWLYIVPWGMNKAVTYVKERYGNPTMILSENGMDQPGNVSIADGVHDTVRIRYYRDYI 181
Query: 372 AELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
ELK AID GA GYFAWSLLDNFEW+LGYT+RFG+VYVDF TL+RYPK SA WF++++
Sbjct: 182 TELKKAIDNGARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFNTLKRYPKDSALWFKNML 361
Query: 192 A 190
+
Sbjct: 362 S 364
Score = 142 bits (305), Expect = 1e-033
Identities = 75/117 (64%), Positives = 78/117 (66%)
Frame = +2 / -1
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VLKST*T P R V PS HSKLSS DQAKYP AP SIA SS *
Sbjct: 351 LNHKAESLGYLFRVLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*S 172
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEF 553
* L S TP A +T PG SIPFS+ IVG PY SLT*VTAL+ P GTM*SQSEF
Sbjct: 171 L*YRILTVSCTPSAMLTFPGWSIPFSESIIVGFPYLSLT*VTALFIPHGTM*SQSEF 1
Score = 108 bits (231), Expect = 2e-023
Identities = 49/119 (41%), Positives = 72/119 (60%)
Frame = +1 / -3
Query: 190 GDDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQL 369
G+ + EP LGV + EV +D+AE G V + PLEVV+QRP +V GA V R L+L
Sbjct: 364 GEHVLEPQG*VLGVPLQSIEVHIDDAETGSVAESPLEVVKQRPSKVPSHSGAIVYRLLEL 185
Query: 370 GDVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV 546
G V VV P V H + D++ +VH++ + HR +++ ++G V SPRH+V+PV
Sbjct: 184 GYVVSVVPDPYCVVHTVSDADISWLVHSIFRKYHRRISISFFNIGHSLVHSPRHNVKPV 8
>gb|BE193330.2|BE193330 HVSMEh0080J19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0080J19f, mRNA sequence
Length = 682
Score = 139 bits (299), Expect(2) = 3e-054
Identities = 55/82 (67%), Positives = 61/82 (74%)
Frame = -2 / +3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W FVYER+GVPIGPRANSDWLYIVPWG+ KAVTYVKE+YGNPTM+LSENGMD PGNV+
Sbjct: 39 WHVGFVYERNGVPIGPRANSDWLYIVPWGMNKAVTYVKERYGNPTMILSENGMDQPGNVS 218
Query: 426 VAQGXXXXXXXXXXXXXXAELK 361
+A G ELK
Sbjct: 219 IADGVHDTVRIRYYRDYITELK 284
Score = 104 bits (222), Expect = 4e-022
Identities = 54/92 (58%), Positives = 59/92 (64%)
Frame = +2 / -1
Query: 320 AKYPTQLAPPSIAAFSSAT*LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT 499
+K P+ SS * * L S TP A +T PG SIPFS+ IVG PY SLT
Sbjct: 325 SKVPSHSGAIVYRLLSSVM*SL*YRILTVSCTPSAMLTFPGWSIPFSESIIVGFPYLSLT 146
Query: 500 *VTALYSPQGTM*SQSEFALGPIGTPSRS*TN 595
*VTAL+ P GTM*SQSEFA GPIGTP RS*TN
Sbjct: 145 *VTALFIPHGTM*SQSEFARGPIGTPFRS*TN 50
Score = 91.8 bits (194), Expect(2) = 3e-054
Identities = 34/47 (72%), Positives = 39/47 (82%)
Frame = -2 / +2
Query: 357 AIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSS 217
AID GA GYFAWSLLDNFEW+LGYT RFG+VYVDF TL+ P++S
Sbjct: 287 AIDNGARVAGYFAWSLLDNFEWRLGYTCRFGIVYVDFNTLKSTPRNS 427
Score = 79.0 bits (166), Expect(2) = 2e-028
Identities = 33/82 (40%), Positives = 51/82 (62%)
Frame = +1 / -3
Query: 361 LQLGDVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVE 540
L+LG V VV P V H + D++ +VH++ + HR +++ ++G V SPRH+V+
Sbjct: 284 LELGYVVSVVPDPYCVVHTVSDADISWLVHSIFRKYHRRISISFFNIGHSLVHSPRHNVK 105
Query: 541 PV*VRPWSNRHTVAFIDELRGP 606
PV V SNRHT++FID+ P
Sbjct: 104 PVGVCTRSNRHTISFIDKPNMP 39
Score = 66.1 bits (138), Expect(2) = 2e-028
Identities = 33/53 (62%), Positives = 34/53 (64%)
Frame = +2 / -2
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAA 361
L E LG VLKST*T P R V PS HSKLSS DQAKYP AP SIA+
Sbjct: 441 LEPQGEFLGVLFRVLKST*TMPKRQV*PSLHSKLSSRDQAKYPATRAPLSIAS 283
>gb|CB858437.1|CB858437 HI07A02w HI Hordeum vulgare subsp. vulgare cDNA clone HI07A02
3-PRIME, mRNA sequence
Length = 653
Score = 138 bits (297), Expect = 2e-032
Identities = 77/127 (60%), Positives = 82/127 (64%)
Frame = +2 / +1
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LNQ AE G R V+KST T PN +V P HSKLS DQAK PT AP SIA FSSA *+
Sbjct: 67 LNQ*AESFGYRLRVVKSTYTMPNLEV*PDSHSKLSRRDQAK*PTTFAPSSIAFFSSAR*V 246
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
* +TL AS + V G SIPFSD IVGL YFSL * T Y P GTM*SQ EFA
Sbjct: 247 L*NSTLEASCRNSSRVRFAG*SIPFSDIMIVGLLYFSLM*FTHPYMPVGTM*SQLEFAFC 426
Query: 563 PIGTPSR 583
PIGTP R
Sbjct: 427 PIGTPFR 447
Score = 122 bits (261), Expect(2) = 6e-053
Identities = 46/62 (74%), Positives = 53/62 (85%)
Frame = -2 / -1
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
ELK AID GAN VGYFAWSLLDNFEW GYTS+FG+VYVDF TL+RYPK SAYWF++++
Sbjct: 233 ELKKAIDDGANVVGYFAWSLLDNFEWLSGYTSKFGIVYVDFTTLKRYPKDSAYWFKNMLQ 54
Query: 189 GS 184
S
Sbjct: 53 AS 48
Score = 105 bits (223), Expect(2) = 6e-053
Identities = 35/60 (58%), Positives = 50/60 (83%)
Frame = -2 / -1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W +++++R+GVPIG +ANS+WLYIVP G+Y V Y++EKY NPT+++SENGMD P N+T
Sbjct: 470 WHVQYIFQRNGVPIGQKANSNWLYIVPTGMYGCVNYIREKYNNPTIIISENGMDQPANLT 291
>gb|BJ467710.1|BJ467710 BJ467710 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29i09 3', mRNA sequence
Length = 712
Score = 178 bits (384), Expect(2) = 1e-048
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / -2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 573 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 394
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 393 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 214
Query: 246 RT 241
+
Sbjct: 213 NS 208
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / +2
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 200 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 379
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 380 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 544
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / +1
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 214 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 393
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 394 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 549
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -2
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 201 LDRHPKASAYWFRDLL 154
Score = 22.1 bits (42), Expect(2) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 160 VSEPVGRRLGVPIQVGAVEVD 222
>gb|AV917900.1|AV917900 AV917900 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17a02 3', mRNA sequence
Length = 691
Score = 178 bits (384), Expect(2) = 1e-048
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / -1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 556 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 377
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 376 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 197
Query: 246 RT 241
+
Sbjct: 196 NS 191
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / +3
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 183 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 362
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 363 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 527
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / +2
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 197 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 376
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 377 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 532
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -1
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 184 LDRHPKASAYWFRDLL 137
Score = 22.1 bits (42), Expect(2) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 143 VSEPVGRRLGVPIQVGAVEVD 205
>gb|AV917579.1|AV917579 AV917579 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10i17 3', mRNA sequence
Length = 688
Score = 178 bits (384), Expect(2) = 1e-048
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / -3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 587 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 408
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 407 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 228
Query: 246 RT 241
+
Sbjct: 227 NS 222
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / +1
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 214 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 393
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 394 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 558
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / +3
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 228 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 407
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 408 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 563
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 215 LDRHPKASAYWFRDLL 168
Score = 22.1 bits (42), Expect(2) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 174 VSEPVGRRLGVPIQVGAVEVD 236
>gb|BJ468501.1|BJ468501 BJ468501 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39b11 3', mRNA sequence
Length = 688
Score = 178 bits (384), Expect(2) = 1e-048
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / -1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 556 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 377
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 376 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 197
Query: 246 RT 241
+
Sbjct: 196 NS 191
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / +3
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 183 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 362
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 363 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 527
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / +2
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 197 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 376
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 377 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 532
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -1
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 184 LDRHPKASAYWFRDLL 137
Score = 22.1 bits (42), Expect(2) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 143 VSEPVGRRLGVPIQVGAVEVD 205
>gb|AV918128.1|AV918128 AV918128 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17p13 3', mRNA sequence
Length = 684
Score = 178 bits (384), Expect(2) = 1e-048
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / -1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 582 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 403
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 402 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 223
Query: 246 RT 241
+
Sbjct: 222 NS 217
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / +2
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 209 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 388
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 389 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 553
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / +1
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 223 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 402
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 403 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 558
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -1
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 210 LDRHPKASAYWFRDLL 163
Score = 22.1 bits (42), Expect(2) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 169 VSEPVGRRLGVPIQVGAVEVD 231
>gb|AV918262.1|AV918262 AV918262 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20h04 3', mRNA sequence
Length = 673
Score = 178 bits (384), Expect(2) = 1e-048
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / -1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 568 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 389
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 388 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 209
Query: 246 RT 241
+
Sbjct: 208 NS 203
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / +3
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 195 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 374
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 375 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 539
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / +2
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 209 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 388
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 389 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 544
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -1
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 196 LDRHPKASAYWFRDLL 149
Score = 22.1 bits (42), Expect(2) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 155 VSEPVGRRLGVPIQVGAVEVD 217
>gb|AV920604.1|AV920604 AV920604 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14n06 3', mRNA sequence
Length = 670
Score = 178 bits (384), Expect(2) = 1e-048
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / -2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 555 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 376
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 375 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 196
Query: 246 RT 241
+
Sbjct: 195 NS 190
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / +2
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 182 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 361
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 362 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 526
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / +1
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 196 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 375
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 376 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 531
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -2
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 183 LDRHPKASAYWFRDLL 136
Score = 22.1 bits (42), Expect(2) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 142 VSEPVGRRLGVPIQVGAVEVD 204
>gb|BJ466393.1|BJ466393 BJ466393 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31o15 3', mRNA sequence
Length = 653
Score = 178 bits (384), Expect(2) = 1e-048
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / -1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 551 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 372
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 371 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 192
Query: 246 RT 241
+
Sbjct: 191 NS 186
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / +1
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 178 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 357
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 358 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 522
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / +3
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 192 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 371
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 372 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 527
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -1
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 179 LDRHPKASAYWFRDLL 132
Score = 22.1 bits (42), Expect(2) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 138 VSEPVGRRLGVPIQVGAVEVD 200
>gb|CB880505.1|CB880505 HM06L21w HM Hordeum vulgare subsp. vulgare cDNA clone HM06L21
3-PRIME, mRNA sequence
Length = 642
Score = 178 bits (384), Expect(2) = 1e-048
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / -3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 577 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 398
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 397 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 218
Query: 246 RT 241
+
Sbjct: 217 NS 212
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / +3
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 204 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 383
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 384 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 548
Score = 111 bits (237), Expect(2) = 6e-025
Identities = 55/112 (49%), Positives = 70/112 (62%)
Frame = +1 / +2
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 218 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 397
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R W NR ++
Sbjct: 398 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWPNRLAIS 553
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 205 LDRHPKASAYWFRDLL 158
Score = 22.1 bits (42), Expect(2) = 6e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 164 VSEPVGRRLGVPIQVGAVEVD 226
>gb|BJ465763.1|BJ465763 BJ465763 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27d04 3', mRNA sequence
Length = 632
Score = 178 bits (384), Expect(2) = 1e-048
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / -2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 556 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 377
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 376 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 197
Query: 246 RT 241
+
Sbjct: 196 NS 191
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / +3
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 183 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 362
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 363 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 527
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / +2
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 197 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 376
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 377 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 532
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -2
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 184 LDRHPKASAYWFRDLL 137
Score = 22.1 bits (42), Expect(2) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 143 VSEPVGRRLGVPIQVGAVEVD 205
>gb|AV918243.1|AV918243 AV918243 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20f24 3', mRNA sequence
Length = 629
Score = 178 bits (384), Expect(2) = 1e-048
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / -3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 576 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 397
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 396 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 217
Query: 246 RT 241
+
Sbjct: 216 NS 211
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / +2
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 203 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 382
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 383 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 547
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / +1
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 217 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 396
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 397 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 552
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 204 LDRHPKASAYWFRDLL 157
Score = 22.1 bits (42), Expect(2) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 163 VSEPVGRRLGVPIQVGAVEVD 225
>gb|AV918260.1|AV918260 AV918260 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20h02 3', mRNA sequence
Length = 629
Score = 178 bits (384), Expect(2) = 1e-048
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / -3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 582 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 403
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 402 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 223
Query: 246 RT 241
+
Sbjct: 222 NS 217
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / +2
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 209 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 388
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 389 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 553
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / +1
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 223 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 402
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 403 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 558
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 210 LDRHPKASAYWFRDLL 163
Score = 22.1 bits (42), Expect(2) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 169 VSEPVGRRLGVPIQVGAVEVD 231
>gb|AV919042.1|AV919042 AV919042 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4d02 3', mRNA sequence
Length = 621
Score = 178 bits (384), Expect(2) = 1e-048
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / -3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 574 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 395
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 394 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 215
Query: 246 RT 241
+
Sbjct: 214 NS 209
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / +3
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 201 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 380
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 381 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 545
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / +2
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 215 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 394
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 395 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 550
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 202 LDRHPKASAYWFRDLL 155
Score = 22.1 bits (42), Expect(2) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 161 VSEPVGRRLGVPIQVGAVEVD 223
>gb|CA028155.1|CA028155 HZ61C14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61C14
5-PRIME, mRNA sequence
Length = 608
Score = 178 bits (384), Expect(2) = 1e-048
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / +3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 9 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 188
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 189 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 368
Query: 246 RT 241
+
Sbjct: 369 NS 374
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / -2
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 382 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 203
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 202 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 38
Score = 111 bits (237), Expect(2) = 6e-025
Identities = 55/112 (49%), Positives = 70/112 (62%)
Frame = +1 / -1
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 368 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 189
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R W NR ++
Sbjct: 188 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWPNRLAIS 33
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / +3
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 381 LDRHPKASAYWFRDLL 428
Score = 22.1 bits (42), Expect(2) = 6e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / -1
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 422 VSEPVGRRLGVPIQVGAVEVD 360
>gb|AV921410.1|AV921410 AV921410 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23f10 3', mRNA sequence
Length = 586
Score = 178 bits (384), Expect(2) = 1e-048
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / -1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 577 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 398
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 397 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 218
Query: 246 RT 241
+
Sbjct: 217 NS 212
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / +3
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 204 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 383
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 384 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 548
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / +2
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 218 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 397
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 398 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 553
Score = 34.1 bits (68), Expect(2) = 1e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -1
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 205 LDRHPKASAYWFRDLL 158
Score = 22.1 bits (42), Expect(2) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 164 VSEPVGRRLGVPIQVGAVEVD 226
>gb|BJ462494.1|BJ462494 BJ462494 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags28l23 5', mRNA sequence
Length = 610
Score = 133 bits (286), Expect = 6e-031
Identities = 74/123 (60%), Positives = 79/123 (64%)
Frame = +2 / -3
Query: 215 AELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**A 394
AE G R V+KST T PN +V P HSKLS DQAK PT AP SIA FSSA *+ * +
Sbjct: 608 AESFGYRLRVVKSTYTMPNLEV*PDSHSKLSRRDQAK*PTTFAPSSIAFFSSAR*VL*NS 429
Query: 395 TLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGT 574
TL AS + V G SIPFSD IVGL YFSL * T Y P GTM*SQ EFA PIGT
Sbjct: 428 TLEASCRNSSRVRFAG*SIPFSDIMIVGLLYFSLM*FTHPYMPVGTM*SQLEFAFCPIGT 249
Query: 575 PSR 583
P R
Sbjct: 248 PFR 240
Score = 107 bits (228), Expect(2) = 2e-048
Identities = 42/52 (80%), Positives = 45/52 (86%)
Frame = -2 / +1
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSA 214
ELK AID GAN VGYFAWSLLDNFEW GYTS+FG+VYVDF TL+RYPK SA
Sbjct: 454 ELKKAIDDGANVVGYFAWSLLDNFEWLSGYTSKFGIVYVDFTTLKRYPKDSA 609
Score = 105 bits (223), Expect(2) = 2e-048
Identities = 35/60 (58%), Positives = 50/60 (83%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W +++++R+GVPIG +ANS+WLYIVP G+Y V Y++EKY NPT+++SENGMD P N+T
Sbjct: 217 WHVQYIFQRNGVPIGQKANSNWLYIVPTGMYGCVNYIREKYNNPTIIISENGMDQPANLT 396
>gb|BE422156.1|BE422156 HWM020cG.09r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM020cG.09, mRNA sequence
Length = 1023
Score = 177 bits (380), Expect(2) = 5e-048
Identities = 67/122 (54%), Positives = 86/122 (70%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 343 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 522
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+ +FG+VYVDF
Sbjct: 523 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSXKFGIVYVDF 702
Query: 246 RT 241
+
Sbjct: 703 NS 708
Score = 135 bits (290), Expect = 2e-031
Identities = 69/115 (60%), Positives = 74/115 (64%)
Frame = +2 / -2
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 716 RLGLLKST*TMPNLXE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 537
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 536 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 372
Score = 108 bits (230), Expect(2) = 5e-024
Identities = 54/112 (48%), Positives = 69/112 (61%)
Frame = +1 / -1
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE RV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 702 EVDVDDAELXRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 523
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R W NR ++
Sbjct: 522 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWPNRLAIS 367
Score = 34.1 bits (68), Expect(2) = 5e-048
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / +1
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 715 LDRHPKASAYWFRDLL 762
Score = 22.1 bits (42), Expect(2) = 5e-024
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / -1
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 756 VSEPVGRRLGVPIQVGAVEVD 694
>gb|AV919161.1|AV919161 AV919161 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4m17 3', mRNA sequence
Length = 714
Score = 175 bits (377), Expect(2) = 1e-047
Identities = 67/118 (56%), Positives = 86/118 (72%)
Frame = -2 / -3
Query: 594 FVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQG 415
+ +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T Q
Sbjct: 565 YAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQY 386
Query: 414 XXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRT 241
+ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF +
Sbjct: 385 LRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 212
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / +3
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 204 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 383
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 384 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 548
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / +2
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 218 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 397
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 398 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 553
Score = 34.1 bits (68), Expect(2) = 1e-047
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 205 LDRHPKASAYWFRDLL 158
Score = 22.1 bits (42), Expect(2) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 164 VSEPVGRRLGVPIQVGAVEVD 226
>gb|BM375888.2|BM375888 EBem06_SQ004_L04_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ004_L04 5', mRNA sequence
Length = 487
Score = 175 bits (376), Expect(2) = 2e-047
Identities = 68/118 (57%), Positives = 85/118 (72%)
Frame = -2 / +2
Query: 594 FVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQG 415
F ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T Q
Sbjct: 2 FAVERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQY 181
Query: 414 XXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRT 241
+ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF +
Sbjct: 182 LRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 355
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / -2
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 363 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 184
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 183 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 19
Score = 113 bits (242), Expect(2) = 1e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / -1
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 349 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 170
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 169 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 14
Score = 34.1 bits (68), Expect(2) = 2e-047
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / +2
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 362 LDRHPKASAYWFRDLL 409
Score = 22.1 bits (42), Expect(2) = 1e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / -1
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 403 VSEPVGRRLGVPIQVGAVEVD 341
>gb|BE196548.3|BE196548 HVSMEh0092J16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092J16f, mRNA sequence
Length = 674
Score = 145 bits (312), Expect(2) = 1e-046
Identities = 56/92 (60%), Positives = 67/92 (72%)
Frame = -2 / +3
Query: 465 LSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKL 286
LSENGMD PGNV++A G ELK AID GA GYFAWSLLDNFEW+L
Sbjct: 78 LSENGMDHPGNVSIADGVHDTVRIRYYRDYITELKKAIDNGARVAGYFAWSLLDNFEWRL 257
Query: 285 GYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
GYT+RFG+VYVDF TL+RYPK SA WF+++++
Sbjct: 258 GYTARFGIVYVDFNTLKRYPKDSALWFKNMLS 353
Score = 97.3 bits (206), Expect(2) = 2e-027
Identities = 53/88 (60%), Positives = 55/88 (62%)
Frame = +2 / -2
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VLKST*T P R V PS HSKLSS DQAKYP AP SIA SS *
Sbjct: 340 LNHKAESLGYLFRVLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*S 161
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDR 466
* L S TP A +T PG SIPFSD+
Sbjct: 160 L*YRILTVSCTPSAMLTFPGWSIPFSDK 77
Score = 60.6 bits (126), Expect(2) = 1e-046
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = -2 / +2
Query: 540 LYIVPWGLYKAVTYVKEKYGNPTMLL 463
LYIVPWG+ KAVTYVKE+YGNPTM+L
Sbjct: 2 LYIVPWGMNKAVTYVKERYGNPTMIL 79
Score = 44.6 bits (91), Expect(2) = 2e-027
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = +2 / -3
Query: 440 GSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*S 541
G F IVG PY SLT*VTAL+ P GTM*S
Sbjct: 102 GGPFHFQISIIVGFPYLSLT*VTALFIPHGTM*S 1
>gb|BQ764256.1|BQ764256 EBan01_SQ005_G11_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_G11 5', mRNA sequence
Length = 608
Score = 182 bits (393), Expect = 1e-045
Identities = 72/133 (54%), Positives = 89/133 (66%)
Frame = -2 / +2
Query: 591 VYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGX 412
++ER+GVPIG +A S WLY+VPWG YKAV +VK K+ +P +L+ ENG+D G+ T+
Sbjct: 2 LFERNGVPIGKQAFSKWLYVVPWGFYKAVMHVKNKFRDPVILIGENGIDQSGSDTLPHAL 181
Query: 411 XXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRR 232
ELK AI GA GYFAWSLLDNFEW++G+TS+FGLVYVD T R
Sbjct: 182 YDTFRIDYFDQYLHELKRAITDGARVTGYFAWSLLDNFEWRMGFTSKFGLVYVDRNTFTR 361
Query: 231 YPKSSAYWFRDVI 193
YPK S WFR VI
Sbjct: 362 YPKDSTRWFRKVI 400
Score = 107 bits (228), Expect = 6e-023
Identities = 63/131 (48%), Positives = 75/131 (57%)
Frame = +2 / -3
Query: 194 MTSLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSA 373
+T NQ E LG R V +ST*T PN +V P HSKLSS+D AK P LAP +A FSS
Sbjct: 399 ITFRNQRVESLGYRVKVFRST*TSPNLEVKPIRHSKLSSSDHAK*PVTLAPSVMARFSSW 220
Query: 374 T*LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEF 553
*+ L S + +V+LP S+PFS I G T +TAL +PQGT S E
Sbjct: 219 RYWSK*SILKVS*SACGSVSLPDWSMPFSPMRITGSLNLFFTCITAL*NPQGTTYSHFEN 40
Query: 554 ALGPIGTPSRS 586
A PIGTP RS
Sbjct: 39 ACFPIGTPLRS 7
Score = 104 bits (221), Expect = 6e-022
Identities = 60/135 (44%), Positives = 72/135 (53%)
Frame = +1 / -2
Query: 178 SVAAGDDIPEPVRRALGVAPERPEVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDR 357
S+ A D +PEP R LGV E VDVDE E G PLEVV+QRP EV+ GA D
Sbjct: 415 SLLALDHLPEPARGVLGVPGEGVPVDVDEPELGGEAHPPLEVVQQRPREVARHPGAVGDG 236
Query: 358 RLQLGDVAPVVGHPRRVAHALGHRDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDV 537
LQL +V V P V + R AR+V VL E V L+L V V+SP H V
Sbjct: 235 ALQLVEVLVEVVDPEGVVERVRQRVAARLVDAVLADEDHRVPELVLHVHHRLVESPGHHV 56
Query: 538 EPV*VRPWSNRHTVA 582
+P +S+RH VA
Sbjct: 55 QPFRECLFSDRHAVA 11
>gb|CV053661.1|CV053661 BNEL101g2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL101g2 5' similar to
beta-glucosidase BGQ60 precursor - barley, mRNA sequence
Length = 617
Score = 180 bits (387), Expect = 7e-045
Identities = 69/106 (65%), Positives = 82/106 (77%)
Frame = -2 / +3
Query: 507 VTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGANCVG 328
VTYVKE+YGNPTM+LSENGMD PGNV++A G ELK AID GA VG
Sbjct: 3 VTYVKERYGNPTMILSENGMDQPGNVSIADGVHDTVRIRYYRDYITELKKAIDNGARVVG 182
Query: 327 YFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
YFAWSLLDNFEW+LGYT+RFG+VYVDF TL+RYPK SA WF+++++
Sbjct: 183 YFAWSLLDNFEWRLGYTARFGIVYVDFNTLKRYPKDSALWFKNMLS 320
Score = 118 bits (253), Expect = 2e-026
Identities = 64/102 (62%), Positives = 66/102 (64%)
Frame = +2 / -2
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VLKST*T P R V PS HSKLSS DQAKYPT AP SIA SS *
Sbjct: 307 LNHKAESLGYLFRVLKST*TMPKRAV*PSLHSKLSSRDQAKYPTTRAPLSIAFLSSVM*S 128
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VT 508
* L S TP A +T PG SIPFS+ IVG PY SLT*VT
Sbjct: 127 L*YRILTVSCTPSAMLTFPGWSIPFSESIIVGFPYLSLT*VT 2
>gb|BQ661453.1|BQ661453 HM03J01u HM Hordeum vulgare subsp. vulgare cDNA clone HM03J01
3-PRIME, mRNA sequence
Length = 561
Score = 166 bits (356), Expect(2) = 9e-045
Identities = 64/110 (58%), Positives = 80/110 (72%)
Frame = -2 / -1
Query: 570 PIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXX 391
PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T Q
Sbjct: 561 PIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVR 382
Query: 390 XXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRT 241
+ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF +
Sbjct: 381 FYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 232
Score = 133 bits (285), Expect = 8e-031
Identities = 68/112 (60%), Positives = 73/112 (65%)
Frame = +2 / +2
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 224 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 403
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPI 568
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPI
Sbjct: 404 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPI 559
Score = 108 bits (231), Expect(2) = 4e-024
Identities = 54/108 (50%), Positives = 68/108 (62%)
Frame = +1 / +1
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDV++AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 238 EVDVNDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 417
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNR 570
R+ R++H+V + R V VLL +V + DVEPV +R W NR
Sbjct: 418 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWPNR 561
Score = 34.1 bits (68), Expect(2) = 9e-045
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -1
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 225 LDRHPKASAYWFRDLL 178
Score = 22.1 bits (42), Expect(2) = 4e-024
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 184 VSEPVGRRLGVPIQVGAVEVD 246
>gb|BJ468274.1|BJ468274 BJ468274 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37p13 3', mRNA sequence
Length = 523
Score = 166 bits (356), Expect(2) = 9e-045
Identities = 64/110 (58%), Positives = 80/110 (72%)
Frame = -2 / -1
Query: 570 PIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXX 391
PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T Q
Sbjct: 520 PIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVR 341
Query: 390 XXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRT 241
+ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF +
Sbjct: 340 FYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 191
Score = 136 bits (291), Expect = 1e-031
Identities = 69/113 (61%), Positives = 74/113 (65%)
Frame = +2 / +3
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 183 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 362
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIG 571
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG
Sbjct: 363 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIG 521
Score = 113 bits (241), Expect(2) = 2e-025
Identities = 56/108 (51%), Positives = 69/108 (63%)
Frame = +1 / +2
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 197 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 376
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNR 570
R+ R++H+V + R V VLL +V + DVEPV +R WSNR
Sbjct: 377 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNR 520
Score = 34.1 bits (68), Expect(2) = 9e-045
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -1
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 184 LDRHPKASAYWFRDLL 137
Score = 22.1 bits (42), Expect(2) = 2e-025
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 143 VSEPVGRRLGVPIQVGAVEVD 205
>gb|BI949909.1|BI949909 HVSMEl0016O06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0016O06f, mRNA sequence
Length = 445
Score = 179 bits (386), Expect = 1e-044
Identities = 69/108 (63%), Positives = 82/108 (75%)
Frame = -2 / +2
Query: 513 KAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGANC 334
KAVTYVKE+YGNPTM+LSENGMD PGNV++A G ELK AID GA
Sbjct: 5 KAVTYVKERYGNPTMILSENGMDQPGNVSIADGVHDTVRIRYYRDYITELKKAIDNGARV 184
Query: 333 VGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
GYFAWSLLDNFEW+LGYT+RFG+VYVDF TL+ YPK SA WF+++++
Sbjct: 185 AGYFAWSLLDNFEWRLGYTARFGIVYVDFNTLKTYPKDSALWFKNMLS 328
Score = 121 bits (258), Expect = 4e-027
Identities = 65/105 (61%), Positives = 68/105 (64%)
Frame = +2 / -2
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VLKST*T P R V PS HSKLSS DQAKYP AP SIA SS *
Sbjct: 315 LNHKAESLGYVFRVLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*S 136
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALY 517
* L S TP A +T PG SIPFS+ IVG PY SLT*VTAL+
Sbjct: 135 L*YRILTVSCTPSAMLTFPGWSIPFSESIIVGFPYLSLT*VTALF 1
>gb|CV059036.1|CV059036 BNEL43f6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL43f6 5' similar to putative
beta-glucosidase, mRNA sequence
Length = 506
Score = 105 bits (223), Expect(3) = 1e-044
Identities = 35/60 (58%), Positives = 50/60 (83%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W +++++R+GVPIG +ANS+WLYIVP G+Y V Y++EKY NPT+++SENGMD P N+T
Sbjct: 19 WHVQYIFQRNGVPIGQKANSNWLYIVPTGMYGCVNYIREKYNNPTIIISENGMDQPANLT 198
Score = 79.9 bits (168), Expect(2) = 5e-021
Identities = 45/75 (60%), Positives = 49/75 (65%)
Frame = +2 / -1
Query: 359 AFSSAT*LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM* 538
+FSSA *+ * +TL AS + V G SIPFSD IVGL YFSL * T Y P GTM*
Sbjct: 266 SFSSAR*VL*NSTLEASCRNSSRVRFAG*SIPFSDIMIVGLLYFSLM*FTHPYMPVGTM* 87
Query: 539 SQSEFALGPIGTPSR 583
SQ EFA PIGTP R
Sbjct: 86 SQLEFAFCPIGTPFR 42
Score = 63.4 bits (132), Expect(3) = 1e-044
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -2 / +2
Query: 363 KAAIDGGANCVGYFAWSLLDNFEWKLGYTSR 271
K AID GAN VGYFAWSLLDNFEW GYT +
Sbjct: 263 KKAIDDGANVVGYFAWSLLDNFEWLSGYTXK 355
Score = 49.6 bits (102), Expect(3) = 1e-044
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = -2 / +1
Query: 288 LGYTSRFGLVYVDFRTLRRYPKSSAYWFRD 199
+G + G+VYVDF TLRRYPK SAYW ++
Sbjct: 337 VGLHLQVGIVYVDFTTLRRYPKDSAYWVQE 426
Score = 40.5 bits (82), Expect(2) = 5e-021
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = +2 / -3
Query: 284 PSFHSKLSSNDQAKYPTQLAPPSIAAF 364
P HSKLS DQAK PT AP SIA F
Sbjct: 342 PDSHSKLSRRDQAK*PTTFAPSSIAFF 262
>gb|BI947342.1|BI947342 HVSMEl0005D04f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0005D04f, mRNA sequence
Length = 508
Score = 178 bits (384), Expect = 2e-044
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 109 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 288
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 289 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 468
Query: 246 RT 241
+
Sbjct: 469 NS 474
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / -3
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 482 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 303
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 302 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 138
Score = 113 bits (242), Expect = 7e-025
Identities = 56/112 (50%), Positives = 71/112 (63%)
Frame = +1 / -2
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 468 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 289
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 288 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 133
>gb|BU972640.1|BU972640 HB22E11r BC Hordeum vulgare subsp. vulgare cDNA clone HB22E11
5-PRIME, mRNA sequence
Length = 591
Score = 178 bits (384), Expect = 2e-044
Identities = 68/122 (55%), Positives = 87/122 (71%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 190 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 369
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 370 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 549
Query: 246 RT 241
+
Sbjct: 550 NS 555
Score = 138 bits (297), Expect = 2e-032
Identities = 70/115 (60%), Positives = 75/115 (65%)
Frame = +2 / -2
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 563 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 384
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 383 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 219
Score = 111 bits (237), Expect = 3e-024
Identities = 55/112 (49%), Positives = 70/112 (62%)
Frame = +1 / -1
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 549 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 370
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R W NR ++
Sbjct: 369 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWPNRLAIS 214
>gb|BQ469152.1|BQ469152 HM03J01r HM Hordeum vulgare subsp. vulgare cDNA clone HM03J01
5-PRIME, mRNA sequence
Length = 578
Score = 178 bits (383), Expect = 3e-044
Identities = 68/120 (56%), Positives = 86/120 (71%)
Frame = -2 / +3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 216 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 395
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF
Sbjct: 396 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDF 575
Score = 137 bits (293), Expect = 7e-032
Identities = 69/111 (62%), Positives = 73/111 (65%)
Frame = +2 / -2
Query: 245 LKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASRTPWA 424
LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR W+
Sbjct: 577 LKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSRRYWS 398
Query: 425 TVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 397 RVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 245
Score = 111 bits (237), Expect = 3e-024
Identities = 55/112 (49%), Positives = 70/112 (62%)
Frame = +1 / -1
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 575 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 396
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R W NR ++
Sbjct: 395 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWPNRLAIS 240
>gb|CB859019.1|CB859019 HI09A13w HI Hordeum vulgare subsp. vulgare cDNA clone HI09A13
3-PRIME, mRNA sequence
Length = 680
Score = 134 bits (287), Expect(3) = 5e-044
Identities = 52/99 (52%), Positives = 67/99 (67%)
Frame = -2 / -3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 609 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 430
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSL 310
Q +ELK AIDGGAN +GYFAWSL
Sbjct: 429 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSL 313
Score = 107 bits (228), Expect(3) = 8e-028
Identities = 54/88 (61%), Positives = 58/88 (65%)
Frame = +2 / +2
Query: 314 DQAKYPTQLAPPSIAAFSSAT*LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFS 493
D AK P LAPPS+A FSS *LR* TL SR W+ V+ PG SIPFS +I G PYF
Sbjct: 317 DHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFW 496
Query: 494 LT*VTALYSPQGTM*SQSEFALGPIGTP 577
L * T Y P GTM*SQ EFA GPIG P
Sbjct: 497 LR*CTHPYIPDGTM*SQFEFAFGPIGLP 580
Score = 47.3 bits (97), Expect(3) = 5e-044
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = -2 / -1
Query: 309 LDNFEWKLGYTSRFGLVYVDFRT 241
LDNFEW GY+S+FG+VYVDF +
Sbjct: 311 LDNFEWMSGYSSKFGIVYVDFNS 243
Score = 34.1 bits (68), Expect(3) = 5e-044
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -1
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 236 LDRHPKASAYWFRDLL 189
Score = 33.6 bits (67), Expect(3) = 8e-028
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 247 EVDVDEAEPGRVPQLPLEVVE 309
EVDVD+AE GRV PL+VVE
Sbjct: 249 EVDVDDAELGRVAGHPLKVVE 311
Score = 22.1 bits (42), Expect(3) = 8e-028
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 195 VSEPVGRRLGVPIQVGAVEVD 257
>gb|AV917200.1|AV917200 AV917200 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8l06 5', mRNA sequence
Length = 474
Score = 177 bits (380), Expect = 7e-044
Identities = 67/122 (54%), Positives = 86/122 (70%)
Frame = -2 / +1
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W + +ER+G PIGP+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T
Sbjct: 103 WQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLT 282
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
Q +ELK AIDGGAN +GYFAW LLDNFEW GY+S+FG+VYVDF
Sbjct: 283 RDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWXLLDNFEWMSGYSSKFGIVYVDF 462
Query: 246 RT 241
+
Sbjct: 463 NS 468
Score = 134 bits (287), Expect = 4e-031
Identities = 68/112 (60%), Positives = 73/112 (65%)
Frame = +2 / -2
Query: 242 VLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASRTPW 421
+LKST*T PN D P HSKLS AK P LAPPS+A FSS *LR* TL SR W
Sbjct: 467 LLKST*TMPNLDE*PDIHSKLSRRXHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSRRYW 288
Query: 422 ATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA GPIG P
Sbjct: 287 SRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLP 132
Score = 111 bits (236), Expect = 5e-024
Identities = 55/112 (49%), Positives = 70/112 (62%)
Frame = +1 / -1
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+ P EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 462 EVDVDDAELGRVAGHPLKVVEEXPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 283
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VRPWSNRHTVA 582
R+ R++H+V + R V VLL +V + DVEPV +R WSNR ++
Sbjct: 282 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAIS 127
>gb|BQ657405.1|BQ657405 HA08I10u HA Hordeum vulgare subsp. vulgare cDNA clone HA08I10
3-PRIME, mRNA sequence
Length = 599
Score = 171 bits (367), Expect = 4e-042
Identities = 65/103 (63%), Positives = 78/103 (75%)
Frame = -2 / -1
Query: 498 VKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFA 319
VKE+YGNPTM+LSENGMD PGNV++A G ELK AID GA GYFA
Sbjct: 599 VKERYGNPTMILSENGMDQPGNVSIADGVHDTVRIRYYRDYITELKKAIDNGARVAGYFA 420
Query: 318 WSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
WSLLDNFEW+LGYT+RFG+VYVDF TL+RYPK SA WF+++++
Sbjct: 419 WSLLDNFEWRLGYTARFGIVYVDFNTLKRYPKDSALWFKNMLS 291
Score = 109 bits (233), Expect = 1e-023
Identities = 59/98 (60%), Positives = 61/98 (62%)
Frame = +2 / +1
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LN AE LG VLKST*T P R V PS HSKLSS DQAKYP AP SIA SS *
Sbjct: 304 LNHKAESLGYLFRVLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*S 483
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSL 496
* L S TP A +T PG SIPFS+ IVG PY SL
Sbjct: 484 L*YRILTVSCTPSAMLTFPGWSIPFSESIIVGFPYLSL 597
>gb|AV913933.1|AV913933 AV913933 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m22 5', mRNA sequence
Length = 573
Score = 155 bits (332), Expect(2) = 2e-041
Identities = 60/106 (56%), Positives = 76/106 (71%)
Frame = -2 / +3
Query: 558 RANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXX 379
+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T Q
Sbjct: 15 KANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRS 194
Query: 378 XXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRT 241
+ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF +
Sbjct: 195 YLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 332
Score = 125 bits (268), Expect = 2e-028
Identities = 65/108 (60%), Positives = 70/108 (64%)
Frame = +2 / -3
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 340 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 161
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFA 556
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA
Sbjct: 160 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFA 17
Score = 102 bits (218), Expect(2) = 2e-022
Identities = 52/103 (50%), Positives = 65/103 (63%)
Frame = +1 / -2
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 326 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 147
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VR 555
R+ R++H+V + R V VLL +V + DVEPV +R
Sbjct: 146 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIR 18
Score = 34.1 bits (68), Expect(2) = 2e-041
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / +3
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 339 LDRHPKASAYWFRDLL 386
Score = 22.1 bits (42), Expect(2) = 2e-022
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / -2
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 380 VSEPVGRRLGVPIQVGAVEVD 318
>gb|AV921547.1|AV921547 AV921547 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m22 3', mRNA sequence
Length = 537
Score = 155 bits (332), Expect(2) = 2e-041
Identities = 60/106 (56%), Positives = 76/106 (71%)
Frame = -2 / -3
Query: 558 RANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXX 379
+ANS+WLYIVP G+Y V Y+ +KYGNP ++++ENGMD PG +T Q
Sbjct: 535 KANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRS 356
Query: 378 XXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRT 241
+ELK AIDGGAN +GYFAWSLLDNFEW GY+S+FG+VYVDF +
Sbjct: 355 YLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 218
Score = 125 bits (268), Expect = 2e-028
Identities = 65/108 (60%), Positives = 70/108 (64%)
Frame = +2 / +3
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 210 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 389
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFA 556
W+ V+ PG SIPFS +I G PYF L * T Y P GTM*SQ EFA
Sbjct: 390 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFA 533
Score = 102 bits (218), Expect(2) = 2e-022
Identities = 52/103 (50%), Positives = 65/103 (63%)
Frame = +1 / +2
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 224 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 403
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSPRHDVEPV*VR 555
R+ R++H+V + R V VLL +V + DVEPV +R
Sbjct: 404 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIR 532
Score = 34.1 bits (68), Expect(2) = 2e-041
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 211 LDRHPKASAYWFRDLL 164
Score = 22.1 bits (42), Expect(2) = 2e-022
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 170 VSEPVGRRLGVPIQVGAVEVD 232
>gb|BE420971.1|BE420971 HWM004.D12 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.D12, mRNA sequence
Length = 1134
Score = 126 bits (270), Expect(3) = 3e-041
Identities = 50/94 (53%), Positives = 63/94 (67%)
Frame = -2 / +3
Query: 522 GLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGG 343
G V Y+ +KYGNP ++++ENGMD PG +T Q +ELK AIDGG
Sbjct: 117 GCLVCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKAIDGG 296
Query: 342 ANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRT 241
AN +GYFAWSLLDNFEW GY+S+FG+VYVDF +
Sbjct: 297 ANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 398
Score = 105 bits (225), Expect(2) = 8e-028
Identities = 55/98 (56%), Positives = 61/98 (62%)
Frame = +2 / -3
Query: 233 RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASR 412
R +LKST*T PN D P HSKLS D AK P LAPPS+A FSS *LR* TL SR
Sbjct: 406 RLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSR 227
Query: 413 TPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQ 526
W+ V+ PG SIPFS +I G PYF L * T P+
Sbjct: 226 RYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTQTKHPR 113
Score = 95.0 bits (201), Expect(3) = 3e-024
Identities = 48/93 (51%), Positives = 59/93 (63%)
Frame = +1 / -2
Query: 247 EVDVDEAEPGRVPQLPLEVVEQRPGEVSHAVGAAVDRRLQLGDVAPVVGHPRRVAHALGH 426
EVDVD+AE GRV PL+VVE+RP EV+ VGA VD LQL +VAPV PRRV L
Sbjct: 392 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 213
Query: 427 RDVARVVHTVL*QEHRGVAVLLLDVGDGFVQSP 525
R+ R++H+V + R V VLL +V SP
Sbjct: 212 REPPRLIHSVFSYDDRRVPVLLAEVVHANQTSP 114
Score = 46.0 bits (94), Expect(3) = 3e-041
Identities = 15/22 (68%), Positives = 21/22 (95%)
Frame = -2 / +2
Query: 579 DGVPIGPRANSDWLYIVPWGLY 514
+G+PIGP+ANS+WLYIVP G++
Sbjct: 59 NGMPIGPKANSNWLYIVPSGMF 124
Score = 37.3 bits (75), Expect(2) = 8e-028
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +2 / -1
Query: 521 PQGTM*SQSEFALGPIGTP 577
P GTM*SQ EFA GPIG P
Sbjct: 117 PDGTM*SQFEFAFGPIGMP 61
Score = 34.1 bits (68), Expect(3) = 3e-041
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2 / +3
Query: 240 LRRYPKSSAYWFRDVI 193
L R+PK+SAYWFRD++
Sbjct: 405 LDRHPKASAYWFRDLL 452
Score = 31.8 bits (63), Expect(3) = 3e-024
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3 / -2
Query: 516 TVPKARCRASLSSPLVQSA 572
T P RCRAS +SPL QSA
Sbjct: 122 TSPMGRCRASSNSPLAQSA 66
Score = 22.1 bits (42), Expect(3) = 3e-024
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / -2
Query: 199 IPEPVRRALGVAPERPEVDVD 261
+ EPV R LGV + V+VD
Sbjct: 446 VSEPVGRRLGVPIQVGAVEVD 384
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 274,995,188
Number of Sequences: 312970
Number of extensions: 4979907
Number of successful extensions: 164441
Number of sequences better than 1.0e-020: 141
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6362506350
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)