TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3203826.2.1
         (594 letters)

Database: Hordeum_nucl_with_EST.fasta 
           312,970 sequences; 175,134,539 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CV058907.1|CV058907  BNEL42c7 Barley EST endosperm librar...   100   1e-020

>gb|CV058907.1|CV058907 BNEL42c7 Barley EST endosperm library Hordeum vulgare subsp.
           vulgare cDNA clone BNEL42c7 5' similar to beta-expansin,
           mRNA sequence
          Length = 502

 Score =  100 bits (212), Expect = 1e-020
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = -2 / +3

                                                              
Query: 548 SAGQWVPMQHSWGAIWRLDSGSALQGPFPLRLTFSSGRVLIASNAIPAGWN 396
           + G W+PMQ SWGA+W+L+SGS LQGPF +RLTF SG++L+A NAIP GWN
Sbjct: 42  ATGVWIPMQQSWGAVWKLNSGSTLQGPFSIRLTFRSGKMLVAGNAIPTGWN 194



  Database: Hordeum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:16 PM
  Number of letters in database: 175,134,539
  Number of sequences in database:  312,970
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 294,789,202
Number of Sequences: 312970
Number of extensions: 4946017
Number of successful extensions: 81860
Number of sequences better than 1.0e-020: 1
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6192839514
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)