TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115474.2.1
(798 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA028449.1|CA028449 HZ62A02r HZ Hordeum vulgare subsp. v... 402 e-112
gb|AV926843.1|AV926843 AV926843 K. Sato unpublished cDNA li... 313 e-106
gb|AV923902.1|AV923902 AV923902 K. Sato unpublished cDNA li... 365 e-100
gb|BJ469841.1|BJ469841 BJ469841 K. Sato unpublished cDNA li... 317 4e-086
gb|BJ473254.1|BJ473254 BJ473254 K. Sato unpublished cDNA li... 306 1e-082
gb|CA015467.1|CA015467 HT14G12r HT Hordeum vulgare subsp. v... 283 5e-079
gb|BE215258.1|BE215258 HV_CEb0006E21f Hordeum vulgare seedl... 199 1e-078
gb|BM372123.2|BM372123 EBro03_SQ004_B12_R root, 3 week, wat... 279 1e-074
gb|BJ477369.1|BJ477369 BJ477369 K. Sato unpublished cDNA li... 105 4e-039
gb|BQ766121.1|BQ766121 EBro08_SQ005_I02_R root, 3 week, dro... 130 1e-032
gb|BJ473916.1|BJ473916 BJ473916 K. Sato unpublished cDNA li... 76 4e-027
gb|CA007616.1|CA007616 HU08I04r HU Hordeum vulgare subsp. v... 105 9e-026
gb|BF627502.2|BF627502 HVSMEb0005A12f Hordeum vulgare seedl... 114 7e-025
gb|BJ473186.1|BJ473186 BJ473186 K. Sato unpublished cDNA li... 104 1e-024
gb|BJ471300.1|BJ471300 BJ471300 K. Sato unpublished cDNA li... 95 7e-022
gb|AV832952.1|AV832952 AV832952 K. Sato unpublished cDNA li... 76 4e-021
>gb|CA028449.1|CA028449 HZ62A02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62A02
5-PRIME, mRNA sequence
Length = 629
Score = 402 bits (873), Expect = e-112
Identities = 164/202 (81%), Positives = 185/202 (91%)
Frame = -3 / +3
Query: 610 QPDSTKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNG 431
Q D K+FLLENP +S+KS+S+I RE+NLNVIMKPLRASML+ SL+R LGG+DK H +NG
Sbjct: 24 QSDPPKVFLLENPTNSIKSSSNISREHNLNVIMKPLRASMLEASLRRVLGGVDKAHVKNG 203
Query: 430 VVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFD 251
+VGNS LGSLLHK++IIVVDDN VNLKVAAGALKKYGAEV CADSGK+AI LLKPPH+FD
Sbjct: 204 LVGNSALGSLLHKRKIIVVDDNAVNLKVAAGALKKYGAEVICADSGKKAIALLKPPHSFD 383
Query: 250 ACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQA 71
ACFMDIQMPEMDGFEATKRIR+MER+LNE++ERGEAPPEC VR+WRTPILAMTADVIQA
Sbjct: 384 ACFMDIQMPEMDGFEATKRIRMMERELNERVERGEAPPECANVRRWRTPILAMTADVIQA 563
Query: 70 THEQCLKSEMDGYVSKPFEGEQ 5
T+E CLK EMDGYVSKPFEGEQ
Sbjct: 564 TYEHCLKCEMDGYVSKPFEGEQ 629
Score = 324 bits (702), Expect = 4e-088
Identities = 148/197 (75%), Positives = 158/197 (80%)
Frame = +3 / -2
Query: 6 CSPSNGLET*PSISDFKHCSCVAWITSAVMANIGVRHCRTPTHSGGASPRSICSFRSLSI 185
CSPSNGLET*PSIS FK CS VAWITSAV+A+IGVRH T HSGGASPRS SF SLSI
Sbjct: 628 CSPSNGLET*PSISHFKQCSYVAWITSAVIASIGVRHLLTLAHSGGASPRSTRSFSSLSI 449
Query: 186 TLILFVASNPSISGICMSMKQASKL*GGFSSVIASFPLSAQVTSAPYFFRAPAATLRFTI 365
LIL VASNPSISGICMSMKQASKL*GGFS+ IA FPLSAQ+TSAPYF RAPAATLRFT
Sbjct: 448 ILILLVASNPSISGICMSMKQASKL*GGFSNAIAFFPLSAQITSAPYFLRAPAATLRFTA 269
Query: 366 LSSTTMIRFL*RRLPSVELPTTPFLQCSLSIPPNALCSET*SMLARSGFIITFKLYSLNI 545
LSSTTMI L*RRLP+ ELPT+PFL C+LS PP SE S+LARSGF+ITFKL SL+I
Sbjct: 268 LSSTTMIFLL*RRLPNAELPTSPFLTCALSTPPKTRLSEASSILARSGFMITFKLCSLDI 89
Query: 546 CXXXXXXXXGFSKRNNF 596
GFSKR F
Sbjct: 88 FELLLIEFVGFSKRKTF 38
Score = 272 bits (588), Expect = 2e-072
Identities = 119/203 (58%), Positives = 143/203 (70%)
Frame = +2 / -1
Query: 5 LLALEWLGNITIHFRFQALFMCRLDNICCHG*YWSSPLPNPYAFWWGFSTFYLLI*ISFH 184
LL +WLG+I IHF FQ + +C LDN+CCH Y SSP PN FWW S FY LI*+SFH
Sbjct: 629 LLPFKWLGDIAIHFTFQTVLICCLDNVCCHCQYRSSPPPNVSTFWWSLSAFYPLI*LSFH 450
Query: 185 HSNPFCGFKSIHFRHLYVHETSIKIVRRFQQCDCFLPTVSTSYFRAIFL*SACSNLEIYN 364
HS+ GFK IHF HLYVHETSIK VR F QC+CFLPTV +YF + L S S+ ++++
Sbjct: 449 HSDSLGGFKPIHFWHLYVHETSIKTVRWF*QCNCFLPTVCANYFCPVLLESTSSHFKVHS 270
Query: 365 IIINHYDSLLVKKAAQC*IADYSIPAMQFIYPTQCSL*RNLKHACTKWLHNYIQVIFPEY 544
+++NH D LVKKA Q *+A+ SI M+ IY TQ * LKH CTK LH+YIQV+ P Y
Sbjct: 269 VVVNHNDFPLVKKATQR*VANQSILDMRLIYSTQNPP**GLKHTCTKRLHDYIQVMLPGY 90
Query: 545 M*IALDRTFRVLQKK*LCRVWLI 613
+* ALDR RVLQKK L RV LI
Sbjct: 89 I*TALDRIRRVLQKKDLRRV*LI 21
Score = 251 bits (543), Expect = 3e-066
Identities = 117/202 (57%), Positives = 138/202 (68%)
Frame = -1 / +1
Query: 612 ISQTLQSYFFWRTLKVLSRAIHIYSGNIT*M*L*SHFVQACFRFRYKEHWVG*INCIAGM 433
ISQTL+ FFWRTL++LSRA+ IY G+IT*M* *S FVQ C R WV *I ++ M
Sbjct: 22 ISQTLRRSFFWRTLRILSRAVQIYPGSIT*M*S*SRFVQVCLRPH*GGFWVE*IRRMSRM 201
Query: 432 E*SAIQHWAAFFTRSES*WLMIIL*ISRLLQAL*RNMARK*LVLTVGRKQSHC*NLLTIL 253
+ A Q W AFFTR +S WL L* + L L R+ +K* TVGRKQ HC*N LT+L
Sbjct: 202 DWLATQRWVAFFTRGKSLWLTTTL*TLKWLLVLSRSTGQK*FAQTVGRKQLHC*NHLTVL 381
Query: 252 MLVSWTYRCLKWMDLKPQKGLE*WKEI*MSK*NVEKPHQNA*GFGSGELQY*P*QQMLSR 73
MLVSWTY+C KWM LKP + E*WKE *MS *N E+ HQN G GEL+Y *QQ LSR
Sbjct: 382 MLVSWTYKCQKWMGLKPPRESE*WKES*MSG*NAERLHQNVLTLGGGELRYWQ*QQTLSR 561
Query: 72 RHMNNA*NLKWMVMFPSHSRAS 7
+HM+ *N+KWM M PSH + S
Sbjct: 562 QHMSTV*NVKWMAMSPSHLKGS 627
Score = 236 bits (510), Expect = 1e-061
Identities = 113/191 (59%), Positives = 130/191 (68%)
Frame = +1 / -3
Query: 16 RMAWKHNHPFQISSIVHVSPG*HLLSWLILEFATAEPLRILVGLLHVLFAHLDLFPSL*S 195
+MAW+H+HPF IS+ H+ PG* LLS + EFAT+ ILV L VL AHL LFPS *
Sbjct: 618 QMAWRHSHPFHISNSAHMLPG*RLLSLPVSEFATS*R*HILVEPLRVLPAHLALFPSF*F 439
Query: 196 FLWLQIHPFQASVCP*NKHQNCEEVSAV*LLPSHCQHKLLPRHISLERLQQP*DLQYYHQ 375
WLQ HPF A VCP*NKHQNCE V A+ LL SHC KLL S E Q * Q Q
Sbjct: 438 SWWLQTHPFLAFVCP*NKHQNCEVVLAMQLLSSHCLRKLLLPRTS*EHQQPL*GSQRCRQ 259
Query: 376 PL*FASCEEGCPVLNCRLLHSCNAVYLSHPMLFVAKPEACLHEVAS*LHSSYIP*IYVNC 555
P *F+SCEEG P L+C+ +HS +A YL HP + +P+A LHE AS*LHSSY P IY+NC
Sbjct: 258 PQ*FSSCEEGYPTLSCQPVHS*HAPYLLHPKPALVRPQAYLHEAAS*LHSSYAPWIYLNC 79
Query: 556 S*QNF*GSPKE 588
S* N *GSPKE
Sbjct: 78 S**NS*GSPKE 46
Score = 226 bits (487), Expect = 2e-058
Identities = 108/198 (54%), Positives = 127/198 (64%)
Frame = -2 / +2
Query: 611 SARLYKVISFGEP*KFCQEQFTYIQGI*LECNYEATSCKHASGFATKSIGWDR*TALQEW 432
S R + +SFGEP +F QEQF YIQG *LECN+EA SCK+A G GW R* A QEW
Sbjct: 23 SVRPSEGLSFGEPYEFYQEQFKYIQGA*LECNHEAASCKYA*GLTKAGFGWSR*GACQEW 202
Query: 431 SSRQFNTGQPSSQEANHSG***YCKSQGCCRRSKEIWRGSNLC*QWEGSNHTAETSSQF* 252
+ Q + G PSSQE NH G* C+ C S+E+ SNL QWE SN A+T+SQF*
Sbjct: 203 TGWQLSVG*PSSQEENHCG*RQRCEP*SGCWCSQEVRGRSNLRRQWEESNCIAKTTSQF* 382
Query: 251 CLFHGHTDA*NGWI*SHXXXXXXXXXXX*ANRTWRSPTRMRRGSAVANSNISHDSRCYPG 72
CLFHGHT+A NGW+*SH *A RT R TRM VANS+ +DSR YPG
Sbjct: 383 CLFHGHTNARNGWV*SHQENQNDGKRAK*AGRTRRGSTRMC*R*EVANSDTGNDSRRYPG 562
Query: 71 DT*TMLEI*NGWLCFQAI 18
+ * + E+*NGWLC QAI
Sbjct: 563 NI*ALFEM*NGWLCLQAI 616
>gb|AV926843.1|AV926843 AV926843 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23p17 5', mRNA sequence
Length = 609
Score = 313 bits (677), Expect(2) = e-106
Identities = 127/158 (80%), Positives = 146/158 (92%)
Frame = -3 / +2
Query: 604 DSTKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVV 425
D K+FLLENP +S+KS+S+I RE+NLNVIMKPLRASML+ SL+R LGG+DK H +NG+V
Sbjct: 2 DPPKVFLLENPTNSIKSSSNISREHNLNVIMKPLRASMLEASLRRVLGGVDKAHVKNGLV 181
Query: 424 GNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDAC 245
GNS LGSLLHK++IIVVDDN VNLKVAAGALKKYGAEV CADSGK+AI LLKPPH+FDAC
Sbjct: 182 GNSALGSLLHKRKIIVVDDNAVNLKVAAGALKKYGAEVICADSGKKAIALLKPPHSFDAC 361
Query: 244 FMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPEC 131
FMDIQMPEMDGFEATKRIR+MER+LNE++ERGEAPPEC
Sbjct: 362 FMDIQMPEMDGFEATKRIRMMERELNERVERGEAPPEC 475
Score = 249 bits (539), Expect(2) = 6e-084
Identities = 115/155 (74%), Positives = 123/155 (79%)
Frame = +3 / -1
Query: 132 HSGGASPRSICSFRSLSITLILFVASNPSISGICMSMKQASKL*GGFSSVIASFPLSAQV 311
HSGGASPRS SF SLSI LIL VASNPSISGICMSMKQASKL*GGFS+ IA FPLSAQ+
Sbjct: 474 HSGGASPRSTRSFSSLSIILILLVASNPSISGICMSMKQASKL*GGFSNAIAFFPLSAQI 295
Query: 312 TSAPYFFRAPAATLRFTILSSTTMIRFL*RRLPSVELPTTPFLQCSLSIPPNALCSET*S 491
TSAPYF RAPAATLRFT LSSTTMI L*RRLP+ ELPT+PFL C+LS PP SE S
Sbjct: 294 TSAPYFLRAPAATLRFTALSSTTMIFLL*RRLPNAELPTSPFLTCALSTPPKTRLSEASS 115
Query: 492 MLARSGFIITFKLYSLNICXXXXXXXXGFSKRNNF 596
+LARSGF+ITFKL SL+I GFSKR F
Sbjct: 114 ILARSGFMITFKLCSLDIFELLLIEFVGFSKRKTF 10
Score = 209 bits (451), Expect(2) = 9e-068
Identities = 93/157 (59%), Positives = 112/157 (71%)
Frame = +2 / -3
Query: 134 FWWGFSTFYLLI*ISFHHSNPFCGFKSIHFRHLYVHETSIKIVRRFQQCDCFLPTVSTSY 313
FWW S FY LI*+SFHHS+ GFK IHF HLYVHETSIK VR F QC+CFLPTV +Y
Sbjct: 472 FWWSLSAFYPLI*LSFHHSDSLGGFKPIHFWHLYVHETSIKTVRWF*QCNCFLPTVCANY 293
Query: 314 FRAIFL*SACSNLEIYNIIINHYDSLLVKKAAQC*IADYSIPAMQFIYPTQCSL*RNLKH 493
F + L S S+ +++++++NH D LVKKA Q *+A+ SI M+ IY TQ * LKH
Sbjct: 292 FCPVLLESTSSHFKVHSVVVNHNDFPLVKKATQR*VANQSILDMRLIYSTQNPP**GLKH 113
Query: 494 ACTKWLHNYIQVIFPEYM*IALDRTFRVLQKK*LCRV 604
CTK LH+YIQV+ P Y+* ALDR RVLQKK L RV
Sbjct: 112 TCTKRLHDYIQVMLPGYI*TALDRIRRVLQKKDLRRV 2
Score = 194 bits (419), Expect(2) = 2e-061
Identities = 91/157 (57%), Positives = 107/157 (68%)
Frame = -1 / +3
Query: 603 TLQSYFFWRTLKVLSRAIHIYSGNIT*M*L*SHFVQACFRFRYKEHWVG*INCIAGME*S 424
TL+ FFWRTL++LSRA+ IY G+IT*M* *S FVQ C R WV *I ++ M+
Sbjct: 3 TLRRSFFWRTLRILSRAVQIYPGSIT*M*S*SRFVQVCLRPH*GGFWVE*IRRMSRMDWL 182
Query: 423 AIQHWAAFFTRSES*WLMIIL*ISRLLQAL*RNMARK*LVLTVGRKQSHC*NLLTILMLV 244
A Q W AFFTR +S WL L* + L L R+ +K* TVGRKQ HC*N LT+LMLV
Sbjct: 183 ATQRWVAFFTRGKSLWLTTTL*TLKWLLVLSRSTGQK*FAQTVGRKQLHC*NHLTVLMLV 362
Query: 243 SWTYRCLKWMDLKPQKGLE*WKEI*MSK*NVEKPHQN 133
SWTY+C KWM LKP + E*WKE *MS *N E+ HQN
Sbjct: 363 SWTYKCQKWMGLKPPRESE*WKES*MSG*NAERLHQN 473
Score = 190 bits (410), Expect(2) = 4e-058
Identities = 93/152 (61%), Positives = 103/152 (67%)
Frame = +1 / -2
Query: 133 ILVGLLHVLFAHLDLFPSL*SFLWLQIHPFQASVCP*NKHQNCEEVSAV*LLPSHCQHKL 312
ILV L VL AHL LFPS * WLQ HPF A VCP*NKHQNCE V A+ LL SHC KL
Sbjct: 473 ILVEPLRVLPAHLALFPSF*FSWWLQTHPFLAFVCP*NKHQNCEVVLAMQLLSSHCLRKL 294
Query: 313 LPRHISLERLQQP*DLQYYHQPL*FASCEEGCPVLNCRLLHSCNAVYLSHPMLFVAKPEA 492
L S E Q * Q QP *F+SCEEG P L+C+ +HS +A YL HP + +P+A
Sbjct: 293 LLPRTS*EHQQPL*GSQRCRQPQ*FSSCEEGYPTLSCQPVHS*HAPYLLHPKPALVRPQA 114
Query: 493 CLHEVAS*LHSSYIP*IYVNCS*QNF*GSPKE 588
LHE AS*LHSSY P IY+NCS* N *GSPKE
Sbjct: 113 YLHEAAS*LHSSYAPWIYLNCS**NS*GSPKE 18
Score = 181 bits (389), Expect(2) = 7e-055
Identities = 85/153 (55%), Positives = 98/153 (64%)
Frame = -2 / +1
Query: 590 ISFGEP*KFCQEQFTYIQGI*LECNYEATSCKHASGFATKSIGWDR*TALQEWSSRQFNT 411
+SFGEP +F QEQF YIQG *LECN+EA SCK+A G GW R* A QEW+ Q +
Sbjct: 16 LSFGEPYEFYQEQFKYIQGA*LECNHEAASCKYA*GLTKAGFGWSR*GACQEWTGWQLSV 195
Query: 410 GQPSSQEANHSG***YCKSQGCCRRSKEIWRGSNLC*QWEGSNHTAETSSQF*CLFHGHT 231
G PSSQE NH G* C+ C S+E+ SNL QWE SN A+T+SQF*CLFHGHT
Sbjct: 196 G*PSSQEENHCG*RQRCEP*SGCWCSQEVRGRSNLRRQWEESNCIAKTTSQF*CLFHGHT 375
Query: 230 DA*NGWI*SHXXXXXXXXXXX*ANRTWRSPTRM 132
+A NGW+*SH *A RT R TRM
Sbjct: 376 NARNGWV*SHQENQNDGKRAK*AGRTRRGSTRM 474
Score = 92.7 bits (196), Expect(2) = e-106
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = -3 / +3
Query: 124 VRQWRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
VR+WRTPILAMTADVIQAT+E CLK EMDGYVSKPFEGEQL
Sbjct: 483 VRRWRTPILAMTADVIQATYEHCLKCEMDGYVSKPFEGEQL 605
Score = 81.7 bits (172), Expect(2) = 6e-084
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = +3 / -3
Query: 3 NCSPSNGLET*PSISDFKHCSCVAWITSAVMANIGVRHCRT 125
NCSPSNGLET*PSIS FK CS VAWITSAV+A+IGVRH T
Sbjct: 604 NCSPSNGLET*PSISHFKQCSYVAWITSAVIASIGVRHLLT 482
Score = 68.0 bits (142), Expect(2) = 9e-068
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +2 / -2
Query: 2 QLLALEWLGNITIHFRFQALFMCRLDNICCHG*YWSSPLPN 124
QLL +WLG+I IHF FQ + +C LDN+CCH Y SSP PN
Sbjct: 605 QLLPFKWLGDIAIHFTFQTVLICCLDNVCCHCQYRSSPPPN 483
Score = 61.1 bits (127), Expect(2) = 2e-061
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / +1
Query: 120 GSGELQY*P*QQMLSRRHMNNA*NLKWMVMFPSHSRASNC 1
G GEL+Y *QQ LSR+HM+ *N+KWM M PSH + S+C
Sbjct: 487 GGGELRYWQ*QQTLSRQHMSTV*NVKWMAMSPSHLKGSSC 606
Score = 54.7 bits (113), Expect(2) = 4e-058
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +1 / -1
Query: 1 TIARPRMAWKHNHPFQISSIVHVSPG*HLLSWLILEFATA 120
T A +MAW+H+HPF IS+ H+ PG* LLS + EFAT+
Sbjct: 606 TTAPLQMAWRHSHPFHISNSAHMLPG*RLLSLPVSEFATS 487
Score = 53.3 bits (110), Expect(2) = 7e-055
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = -2 / +2
Query: 116 VANSNISHDSRCYPGDT*TMLEI*NGWLCFQAI 18
VANS+ +DSR YPG+ * + E+*NGWLC QAI
Sbjct: 491 VANSDTGNDSRRYPGNI*ALFEM*NGWLCLQAI 589
>gb|AV923902.1|AV923902 AV923902 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd20a22 5', mRNA sequence
Length = 566
Score = 365 bits (791), Expect = e-100
Identities = 149/187 (79%), Positives = 172/187 (91%)
Frame = -3 / +2
Query: 598 TKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNGVVGN 419
+++FLLENP +S+KS+S+I RE+NLNVIMKPLRASML+ SL+R LGG+DK H +NG+VGN
Sbjct: 5 SEVFLLENPTNSIKSSSNISREHNLNVIMKPLRASMLEASLRRVLGGVDKAHVKNGLVGN 184
Query: 418 STLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFM 239
S LGSLLHK++IIVVDDN VNLKVAAGALKKYGAEV CADSGK+AI LLKPPH+FDACFM
Sbjct: 185 SALGSLLHKRKIIVVDDNAVNLKVAAGALKKYGAEVICADSGKKAIALLKPPHSFDACFM 364
Query: 238 DIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQ 59
DIQMPEMDGFEATKRIR+MER+LNE++ERGEAPPEC VR+WRTPILAMTADVIQAT+E
Sbjct: 365 DIQMPEMDGFEATKRIRMMERELNERVERGEAPPECANVRRWRTPILAMTADVIQATYEH 544
Query: 58 CLKSEMD 38
LK EMD
Sbjct: 545 XLKCEMD 565
Score = 292 bits (632), Expect = 2e-078
Identities = 135/183 (73%), Positives = 145/183 (79%)
Frame = +3 / -3
Query: 39 SISDFKHCSCVAWITSAVMANIGVRHCRTPTHSGGASPRSICSFRSLSITLILFVASNPS 218
SIS F CS VAWITSAV+A+IGVRH T HSGGASPRS SF SLSI LIL VASNPS
Sbjct: 564 SISHFXQCSYVAWITSAVIASIGVRHLLTLAHSGGASPRSTRSFSSLSIILILLVASNPS 385
Query: 219 ISGICMSMKQASKL*GGFSSVIASFPLSAQVTSAPYFFRAPAATLRFTILSSTTMIRFL* 398
ISGICMSMKQASKL*GGFS+ IA FPLSAQ+TSAPYF RAPAATLRFT LSSTTMI L*
Sbjct: 384 ISGICMSMKQASKL*GGFSNAIAFFPLSAQITSAPYFLRAPAATLRFTALSSTTMIFLL* 205
Query: 399 RRLPSVELPTTPFLQCSLSIPPNALCSET*SMLARSGFIITFKLYSLNICXXXXXXXXGF 578
RRLP+ ELPT+PFL C+LS PP SE S+LARSGF+ITFKL SL+I GF
Sbjct: 204 RRLPNAELPTSPFLTCALSTPPKTRLSEASSILARSGFMITFKLCSLDIFELLLIEFVGF 25
Query: 579 SKR 587
SKR
Sbjct: 24 SKR 16
Score = 252 bits (544), Expect = 2e-066
Identities = 108/184 (58%), Positives = 130/184 (70%)
Frame = +2 / -2
Query: 38 IHFRFQALFMCRLDNICCHG*YWSSPLPNPYAFWWGFSTFYLLI*ISFHHSNPFCGFKSI 217
IHF FQ + +C LDN+CCH Y SSP PN FWW S FY LI*+SFHHS+ GFK I
Sbjct: 565 IHFTFQXVLICCLDNVCCHCQYRSSPPPNVSTFWWSLSAFYPLI*LSFHHSDSLGGFKPI 386
Query: 218 HFRHLYVHETSIKIVRRFQQCDCFLPTVSTSYFRAIFL*SACSNLEIYNIIINHYDSLLV 397
HF HLYVHETSIK VR F QC+CFLPTV +YF + L S S+ +++++++NH D LV
Sbjct: 385 HFWHLYVHETSIKTVRWF*QCNCFLPTVCANYFCPVLLESTSSHFKVHSVVVNHNDFPLV 206
Query: 398 KKAAQC*IADYSIPAMQFIYPTQCSL*RNLKHACTKWLHNYIQVIFPEYM*IALDRTFRV 577
KKA Q *+A+ SI M+ IY TQ * LKH CTK LH+YIQV+ P Y+* ALDR RV
Sbjct: 205 KKATQR*VANQSILDMRLIYSTQNPP**GLKHTCTKRLHDYIQVMLPGYI*TALDRIRRV 26
Query: 578 LQKK 589
LQKK
Sbjct: 25 LQKK 14
Score = 230 bits (497), Expect = 7e-060
Identities = 107/184 (58%), Positives = 126/184 (68%)
Frame = -1 / +3
Query: 588 FFWRTLKVLSRAIHIYSGNIT*M*L*SHFVQACFRFRYKEHWVG*INCIAGME*SAIQHW 409
FFWRTL++LSRA+ IY G+IT*M* *S FVQ C R WV *I ++ M+ A Q W
Sbjct: 15 FFWRTLRILSRAVQIYPGSIT*M*S*SRFVQVCLRPH*GGFWVE*IRRMSRMDWLATQRW 194
Query: 408 AAFFTRSES*WLMIIL*ISRLLQAL*RNMARK*LVLTVGRKQSHC*NLLTILMLVSWTYR 229
AFFTR +S WL L* + L L R+ +K* TVGRKQ HC*N LT+LMLVSWTY+
Sbjct: 195 VAFFTRGKSLWLTTTL*TLKWLLVLSRSTGQK*FAQTVGRKQLHC*NHLTVLMLVSWTYK 374
Query: 228 CLKWMDLKPQKGLE*WKEI*MSK*NVEKPHQNA*GFGSGELQY*P*QQMLSRRHMNNA*N 49
C KWM LKP + E*WKE *MS *N E+ HQN G GEL+Y *QQ LSR+HM+ *N
Sbjct: 375 CQKWMGLKPPRESE*WKES*MSG*NAERLHQNVLTLGGGELRYWQ*QQTLSRQHMSTX*N 554
Query: 48 LKWM 37
+KWM
Sbjct: 555 VKWM 566
Score = 221 bits (477), Expect = 4e-057
Identities = 109/184 (59%), Positives = 122/184 (66%)
Frame = +1 / -1
Query: 37 HPFQISSIVHVSPG*HLLSWLILEFATAEPLRILVGLLHVLFAHLDLFPSL*SFLWLQIH 216
HPF IS H+ PG* LLS + EFAT+ ILV L VL AHL LFPS * WLQ H
Sbjct: 566 HPFHISXSAHMLPG*RLLSLPVSEFATS*R*HILVEPLRVLPAHLALFPSF*FSWWLQTH 387
Query: 217 PFQASVCP*NKHQNCEEVSAV*LLPSHCQHKLLPRHISLERLQQP*DLQYYHQPL*FASC 396
PF A VCP*NKHQNCE V A+ LL SHC KLL S E Q * Q QP *F+SC
Sbjct: 386 PFLAFVCP*NKHQNCEVVLAMQLLSSHCLRKLLLPRTS*EHQQPL*GSQRCRQPQ*FSSC 207
Query: 397 EEGCPVLNCRLLHSCNAVYLSHPMLFVAKPEACLHEVAS*LHSSYIP*IYVNCS*QNF*G 576
EEG P L+C+ +HS +A YL HP + +P+A LHE AS*LHSSY P IY+NCS* N *G
Sbjct: 206 EEGYPTLSCQPVHS*HAPYLLHPKPALVRPQAYLHEAAS*LHSSYAPWIYLNCS**NS*G 27
Query: 577 SPKE 588
SPKE
Sbjct: 26 SPKE 15
Score = 207 bits (447), Expect = 5e-053
Identities = 100/184 (54%), Positives = 118/184 (64%)
Frame = -2 / +1
Query: 590 ISFGEP*KFCQEQFTYIQGI*LECNYEATSCKHASGFATKSIGWDR*TALQEWSSRQFNT 411
+SFGEP +F QEQF YIQG *LECN+EA SCK+A G GW R* A QEW+ Q +
Sbjct: 13 LSFGEPYEFYQEQFKYIQGA*LECNHEAASCKYA*GLTKAGFGWSR*GACQEWTGWQLSV 192
Query: 410 GQPSSQEANHSG***YCKSQGCCRRSKEIWRGSNLC*QWEGSNHTAETSSQF*CLFHGHT 231
G PSSQE NH G* C+ C S+E+ SNL QWE SN A+T+SQF*CLFHGHT
Sbjct: 193 G*PSSQEENHCG*RQRCEP*SGCWCSQEVRGRSNLRRQWEESNCIAKTTSQF*CLFHGHT 372
Query: 230 DA*NGWI*SHXXXXXXXXXXX*ANRTWRSPTRMRRGSAVANSNISHDSRCYPGDT*TMLE 51
+A NGW+*SH *A RT R TRM VANS+ +DSR YPG+ * + E
Sbjct: 373 NARNGWV*SHQENQNDGKRAK*AGRTRRGSTRMC*R*EVANSDTGNDSRRYPGNI*ALXE 552
Query: 50 I*NG 39
+*NG
Sbjct: 553 M*NG 564
>gb|BJ469841.1|BJ469841 BJ469841 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal37n04 5', mRNA sequence
Length = 655
Score = 317 bits (687), Expect = 4e-086
Identities = 128/150 (85%), Positives = 140/150 (93%)
Frame = -3 / +2
Query: 451 KLHCRNGVVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLL 272
K H +NG+VGNS LGSLLHK++IIVVDDN VNLKVAAGALKKYGAEV CADSGK+AI LL
Sbjct: 2 KAHVKNGLVGNSALGSLLHKRKIIVVDDNAVNLKVAAGALKKYGAEVICADSGKKAIALL 181
Query: 271 KPPHNFDACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAM 92
KPPH+FDACFMDIQMPEMDGFEATKRIR+MER+LNE++ERGEAPPEC VR+WRTPILAM
Sbjct: 182 KPPHSFDACFMDIQMPEMDGFEATKRIRMMERELNERVERGEAPPECANVRRWRTPILAM 361
Query: 91 TADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
TADVIQAT+E CLK EMDGYVSKPFEGEQL
Sbjct: 362 TADVIQATYEHCLKCEMDGYVSKPFEGEQL 451
Score = 274 bits (593), Expect = 4e-073
Identities = 122/149 (81%), Positives = 129/149 (86%)
Frame = +3 / -2
Query: 3 NCSPSNGLET*PSISDFKHCSCVAWITSAVMANIGVRHCRTPTHSGGASPRSICSFRSLS 182
NCSPSNGLET*PSIS FK CS VAWITSAV+A+IGVRH T HSGGASPRS SF SLS
Sbjct: 450 NCSPSNGLET*PSISHFKQCSYVAWITSAVIASIGVRHLLTLAHSGGASPRSTRSFSSLS 271
Query: 183 ITLILFVASNPSISGICMSMKQASKL*GGFSSVIASFPLSAQVTSAPYFFRAPAATLRFT 362
I LIL VASNPSISGICMSMKQASKL*GGFS+ IA FPLSAQ+TSAPYF RAPAATLRFT
Sbjct: 270 IILILLVASNPSISGICMSMKQASKL*GGFSNAIAFFPLSAQITSAPYFLRAPAATLRFT 91
Query: 363 ILSSTTMIRFL*RRLPSVELPTTPFLQCS 449
LSSTTMI L*RRLP+ ELPT+PFL C+
Sbjct: 90 ALSSTTMIFLL*RRLPNAELPTSPFLTCA 4
Score = 209 bits (450), Expect = 2e-053
Identities = 85/149 (57%), Positives = 106/149 (71%)
Frame = +2 / -1
Query: 2 QLLALEWLGNITIHFRFQALFMCRLDNICCHG*YWSSPLPNPYAFWWGFSTFYLLI*ISF 181
QLL +WLG+I IHF FQ + +C LDN+CCH Y SSP PN FWW S FY LI*+SF
Sbjct: 451 QLLPFKWLGDIAIHFTFQTVLICCLDNVCCHCQYRSSPPPNVSTFWWSLSAFYPLI*LSF 272
Query: 182 HHSNPFCGFKSIHFRHLYVHETSIKIVRRFQQCDCFLPTVSTSYFRAIFL*SACSNLEIY 361
HHS+ GFK IHF HLYVHETSIK VR F QC+CFLPTV +YF + L S S+ +++
Sbjct: 271 HHSDSLGGFKPIHFWHLYVHETSIKTVRWF*QCNCFLPTVCANYFCPVLLESTSSHFKVH 92
Query: 362 NIIINHYDSLLVKKAAQC*IADYSIPAMQ 448
++++NH D LVKKA Q *+A+ SI M+
Sbjct: 91 SVVVNHNDFPLVKKATQR*VANQSILDMR 5
Score = 188 bits (404), Expect = 5e-047
Identities = 84/145 (57%), Positives = 99/145 (68%)
Frame = -1 / +3
Query: 435 ME*SAIQHWAAFFTRSES*WLMIIL*ISRLLQAL*RNMARK*LVLTVGRKQSHC*NLLTI 256
M+ A Q W AFFTR +S WL L* + L L R+ +K* TVGRKQ HC*N LT+
Sbjct: 18 MDWLATQRWVAFFTRGKSLWLTTTL*TLKWLLVLSRSTGQK*FAQTVGRKQLHC*NHLTV 197
Query: 255 LMLVSWTYRCLKWMDLKPQKGLE*WKEI*MSK*NVEKPHQNA*GFGSGELQY*P*QQMLS 76
LMLVSWTY+C KWM LKP + E*WKE *MS *N E+ HQN G GEL+Y *QQ LS
Sbjct: 198 LMLVSWTYKCQKWMGLKPPRESE*WKES*MSG*NAERLHQNVLTLGGGELRYWQ*QQTLS 377
Query: 75 RRHMNNA*NLKWMVMFPSHSRASNC 1
R+HM+ *N+KWM M PSH + S+C
Sbjct: 378 RQHMSTV*NVKWMAMSPSHLKGSSC 452
Score = 171 bits (368), Expect = 4e-042
Identities = 84/149 (56%), Positives = 97/149 (65%)
Frame = +1 / -3
Query: 1 TIARPRMAWKHNHPFQISSIVHVSPG*HLLSWLILEFATAEPLRILVGLLHVLFAHLDLF 180
T A +MAW+H+HPF IS+ H+ PG* LLS + EFAT+ ILV L VL AHL LF
Sbjct: 452 TTAPLQMAWRHSHPFHISNSAHMLPG*RLLSLPVSEFATS*R*HILVEPLRVLPAHLALF 273
Query: 181 PSL*SFLWLQIHPFQASVCP*NKHQNCEEVSAV*LLPSHCQHKLLPRHISLERLQQP*DL 360
PS * WLQ HPF A VCP*NKHQNCE V A+ LL SHC KLL S E Q *
Sbjct: 272 PSF*FSWWLQTHPFLAFVCP*NKHQNCEVVLAMQLLSSHCLRKLLLPRTS*EHQQPL*GS 93
Query: 361 QYYHQPL*FASCEEGCPVLNCRLLHSCNA 447
Q QP *F+SCEEG P L+C+ +HS +A
Sbjct: 92 QRCRQPQ*FSSCEEGYPTLSCQPVHS*HA 6
Score = 155 bits (332), Expect = 4e-037
Identities = 76/143 (53%), Positives = 90/143 (62%)
Frame = -2 / +1
Query: 446 ALQEWSSRQFNTGQPSSQEANHSG***YCKSQGCCRRSKEIWRGSNLC*QWEGSNHTAET 267
A QEW+ Q + G PSSQE NH G* C+ C S+E+ SNL QWE SN A+T
Sbjct: 7 ACQEWTGWQLSVG*PSSQEENHCG*RQRCEP*SGCWCSQEVRGRSNLRRQWEESNCIAKT 186
Query: 266 SSQF*CLFHGHTDA*NGWI*SHXXXXXXXXXXX*ANRTWRSPTRMRRGSAVANSNISHDS 87
+SQF*CLFHGHT+A NGW+*SH *A RT R TRM VANS+ +DS
Sbjct: 187 TSQF*CLFHGHTNARNGWV*SHQENQNDGKRAK*AGRTRRGSTRMC*R*EVANSDTGNDS 366
Query: 86 RCYPGDT*TMLEI*NGWLCFQAI 18
R YPG+ * + E+*NGWLC QAI
Sbjct: 367 RRYPGNI*ALFEM*NGWLCLQAI 435
>gb|BJ473254.1|BJ473254 BJ473254 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41f18 5', mRNA sequence
Length = 621
Score = 306 bits (662), Expect = 1e-082
Identities = 124/143 (86%), Positives = 135/143 (94%)
Frame = -3 / +3
Query: 430 VVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFD 251
+VGNS LGSLLHK++IIVVDDN VNLKVAAGALKKYGAEV CADSGK+AI LLKPPH+FD
Sbjct: 3 LVGNSALGSLLHKRKIIVVDDNAVNLKVAAGALKKYGAEVICADSGKKAIALLKPPHSFD 182
Query: 250 ACFMDIQMPEMDGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQA 71
ACFMDIQMPEMDGFEATKRIR+MER+LNE++ERGEAPPEC VR+WRTPILAMTADVIQA
Sbjct: 183 ACFMDIQMPEMDGFEATKRIRMMERELNERVERGEAPPECANVRRWRTPILAMTADVIQA 362
Query: 70 THEQCLKSEMDGYVSKPFEGEQL 2
T+E CLK EMDGYVSKPFEGEQL
Sbjct: 363 TYEHCLKCEMDGYVSKPFEGEQL 431
Score = 262 bits (567), Expect = 1e-069
Identities = 118/143 (82%), Positives = 124/143 (86%)
Frame = +3 / -3
Query: 3 NCSPSNGLET*PSISDFKHCSCVAWITSAVMANIGVRHCRTPTHSGGASPRSICSFRSLS 182
NCSPSNGLET*PSIS FK CS VAWITSAV+A+IGVRH T HSGGASPRS SF SLS
Sbjct: 430 NCSPSNGLET*PSISHFKQCSYVAWITSAVIASIGVRHLLTLAHSGGASPRSTRSFSSLS 251
Query: 183 ITLILFVASNPSISGICMSMKQASKL*GGFSSVIASFPLSAQVTSAPYFFRAPAATLRFT 362
I LIL VASNPSISGICMSMKQASKL*GGFS+ IA FPLSAQ+TSAPYF RAPAATLRFT
Sbjct: 250 IILILLVASNPSISGICMSMKQASKL*GGFSNAIAFFPLSAQITSAPYFLRAPAATLRFT 71
Query: 363 ILSSTTMIRFL*RRLPSVELPTT 431
LSSTTMI L*RRLP+ ELPT+
Sbjct: 70 ALSSTTMIFLL*RRLPNAELPTS 2
Score = 205 bits (442), Expect = 3e-052
Identities = 82/142 (57%), Positives = 102/142 (71%)
Frame = +2 / -2
Query: 2 QLLALEWLGNITIHFRFQALFMCRLDNICCHG*YWSSPLPNPYAFWWGFSTFYLLI*ISF 181
QLL +WLG+I IHF FQ + +C LDN+CCH Y SSP PN FWW S FY LI*+SF
Sbjct: 431 QLLPFKWLGDIAIHFTFQTVLICCLDNVCCHCQYRSSPPPNVSTFWWSLSAFYPLI*LSF 252
Query: 182 HHSNPFCGFKSIHFRHLYVHETSIKIVRRFQQCDCFLPTVSTSYFRAIFL*SACSNLEIY 361
HHS+ GFK IHF HLYVHETSIK VR F QC+CFLPTV +YF + L S S+ +++
Sbjct: 251 HHSDSLGGFKPIHFWHLYVHETSIKTVRWF*QCNCFLPTVCANYFCPVLLESTSSHFKVH 72
Query: 362 NIIINHYDSLLVKKAAQC*IAD 427
++++NH D LVKKA Q *+A+
Sbjct: 71 SVVVNHNDFPLVKKATQR*VAN 6
Score = 187 bits (403), Expect = 6e-047
Identities = 83/141 (58%), Positives = 97/141 (68%)
Frame = -1 / +1
Query: 423 AIQHWAAFFTRSES*WLMIIL*ISRLLQAL*RNMARK*LVLTVGRKQSHC*NLLTILMLV 244
A Q W AFFTR +S WL L* + L L R+ +K* TVGRKQ HC*N LT+LMLV
Sbjct: 10 ATQRWVAFFTRGKSLWLTTTL*TLKWLLVLSRSTGQK*FAQTVGRKQLHC*NHLTVLMLV 189
Query: 243 SWTYRCLKWMDLKPQKGLE*WKEI*MSK*NVEKPHQNA*GFGSGELQY*P*QQMLSRRHM 64
SWTY+C KWM LKP + E*WKE *MS *N E+ HQN G GEL+Y *QQ LSR+HM
Sbjct: 190 SWTYKCQKWMGLKPPRESE*WKES*MSG*NAERLHQNVLTLGGGELRYWQ*QQTLSRQHM 369
Query: 63 NNA*NLKWMVMFPSHSRASNC 1
+ *N+KWM M PSH + S+C
Sbjct: 370 STV*NVKWMAMSPSHLKGSSC 432
Score = 166 bits (357), Expect = 1e-040
Identities = 81/142 (57%), Positives = 92/142 (64%)
Frame = +1 / -1
Query: 1 TIARPRMAWKHNHPFQISSIVHVSPG*HLLSWLILEFATAEPLRILVGLLHVLFAHLDLF 180
T A +MAW+H+HPF IS+ H+ PG* LLS + EFAT+ ILV L VL AHL LF
Sbjct: 432 TTAPLQMAWRHSHPFHISNSAHMLPG*RLLSLPVSEFATS*R*HILVEPLRVLPAHLALF 253
Query: 181 PSL*SFLWLQIHPFQASVCP*NKHQNCEEVSAV*LLPSHCQHKLLPRHISLERLQQP*DL 360
PS * WLQ HPF A VCP*NKHQNCE V A+ LL SHC KLL S E Q *
Sbjct: 252 PSF*FSWWLQTHPFLAFVCP*NKHQNCEVVLAMQLLSSHCLRKLLLPRTS*EHQQPL*GS 73
Query: 361 QYYHQPL*FASCEEGCPVLNCR 426
Q QP *F+SCEEG P L+C+
Sbjct: 72 QRCRQPQ*FSSCEEGYPTLSCQ 7
Score = 144 bits (310), Expect = 4e-034
Identities = 72/135 (53%), Positives = 85/135 (62%)
Frame = -2 / +2
Query: 422 QFNTGQPSSQEANHSG***YCKSQGCCRRSKEIWRGSNLC*QWEGSNHTAETSSQF*CLF 243
Q + G PSSQE NH G* C+ C S+E+ SNL QWE SN A+T+SQF*CLF
Sbjct: 11 QLSVG*PSSQEENHCG*RQRCEP*SGCWCSQEVRGRSNLRRQWEESNCIAKTTSQF*CLF 190
Query: 242 HGHTDA*NGWI*SHXXXXXXXXXXX*ANRTWRSPTRMRRGSAVANSNISHDSRCYPGDT* 63
HGHT+A NGW+*SH *A RT R TRM VANS+ +DSR YPG+ *
Sbjct: 191 HGHTNARNGWV*SHQENQNDGKRAK*AGRTRRGSTRMC*R*EVANSDTGNDSRRYPGNI* 370
Query: 62 TMLEI*NGWLCFQAI 18
+ E+*NGWLC QAI
Sbjct: 371 ALFEM*NGWLCLQAI 415
>gb|CA015467.1|CA015467 HT14G12r HT Hordeum vulgare subsp. vulgare cDNA clone HT14G12
5-PRIME, mRNA sequence
Length = 599
Score = 283 bits (613), Expect(2) = 5e-079
Identities = 114/132 (86%), Positives = 125/132 (94%)
Frame = -3 / +3
Query: 397 HKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEM 218
+K++IIVVDDN VNLKVAAGALKKYGAEV CADSGK+AI LLKPPH+FDACFMDIQMPEM
Sbjct: 102 YKRKIIVVDDNAVNLKVAAGALKKYGAEVICADSGKKAIALLKPPHSFDACFMDIQMPEM 281
Query: 217 DGFEATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMD 38
DGFEATKRIR+MER+LNE++ERGEAPPEC VR+WRTPILAMTADVIQAT+E CLK EMD
Sbjct: 282 DGFEATKRIRMMERELNERVERGEAPPECANVRRWRTPILAMTADVIQATYEHCLKCEMD 461
Query: 37 GYVSKPFEGEQL 2
GYVSKPFEGEQL
Sbjct: 462 GYVSKPFEGEQL 497
Score = 245 bits (529), Expect(2) = 1e-071
Identities = 111/138 (80%), Positives = 117/138 (84%)
Frame = +3 / -2
Query: 3 NCSPSNGLET*PSISDFKHCSCVAWITSAVMANIGVRHCRTPTHSGGASPRSICSFRSLS 182
NCSPSNGLET*PSIS FK CS VAWITSAV+A+IGVRH T HSGGASPRS SF SLS
Sbjct: 496 NCSPSNGLET*PSISHFKQCSYVAWITSAVIASIGVRHLLTLAHSGGASPRSTRSFSSLS 317
Query: 183 ITLILFVASNPSISGICMSMKQASKL*GGFSSVIASFPLSAQVTSAPYFFRAPAATLRFT 362
I LIL VASNPSISGICMSMKQASKL*GGFS+ IA FPLSAQ+TSAPYF RAPAATLRFT
Sbjct: 316 IILILLVASNPSISGICMSMKQASKL*GGFSNAIAFFPLSAQITSAPYFLRAPAATLRFT 137
Query: 363 ILSSTTMIRFL*RRLPSV 416
LSSTTMI L* P++
Sbjct: 136 ALSSTTMIFLL*EGYPTL 83
Score = 195 bits (421), Expect(2) = 6e-053
Identities = 76/134 (56%), Positives = 96/134 (71%)
Frame = +2 / -1
Query: 2 QLLALEWLGNITIHFRFQALFMCRLDNICCHG*YWSSPLPNPYAFWWGFSTFYLLI*ISF 181
QLL +WLG+I IHF FQ + +C LDN+CCH Y SSP PN FWW S FY LI*+SF
Sbjct: 497 QLLPFKWLGDIAIHFTFQTVLICCLDNVCCHCQYRSSPPPNVSTFWWSLSAFYPLI*LSF 318
Query: 182 HHSNPFCGFKSIHFRHLYVHETSIKIVRRFQQCDCFLPTVSTSYFRAIFL*SACSNLEIY 361
HHS+ GFK IHF HLYVHETSIK VR F QC+CFLPTV +YF + L S S+ +++
Sbjct: 317 HHSDSLGGFKPIHFWHLYVHETSIKTVRWF*QCNCFLPTVCANYFCPVLLESTSSHFKVH 138
Query: 362 NIIINHYDSLLVKK 403
++++NH D LV++
Sbjct: 137 SVVVNHNDFPLVRR 96
Score = 171 bits (369), Expect(2) = 3e-043
Identities = 77/135 (57%), Positives = 92/135 (68%)
Frame = -1 / +1
Query: 405 AFFTRSES*WLMIIL*ISRLLQAL*RNMARK*LVLTVGRKQSHC*NLLTILMLVSWTYRC 226
+ TR +S WL L* + L L R+ +K* TVGRKQ HC*N LT+LMLVSWTY+C
Sbjct: 94 SLLTRGKSLWLTTTL*TLKWLLVLSRSTGQK*FAQTVGRKQLHC*NHLTVLMLVSWTYKC 273
Query: 225 LKWMDLKPQKGLE*WKEI*MSK*NVEKPHQNA*GFGSGELQY*P*QQMLSRRHMNNA*NL 46
KWM LKP + E*WKE *MS *N E+ HQN G GEL+Y *QQ LSR+HM+ *N+
Sbjct: 274 QKWMGLKPPRESE*WKES*MSG*NAERLHQNVLTLGGGELRYWQ*QQTLSRQHMSTV*NV 453
Query: 45 KWMVMFPSHSRASNC 1
KWM M PSH + S+C
Sbjct: 454 KWMAMSPSHLKGSSC 498
Score = 150 bits (323), Expect = 7e-036
Identities = 75/134 (55%), Positives = 86/134 (64%)
Frame = +1 / -3
Query: 1 TIARPRMAWKHNHPFQISSIVHVSPG*HLLSWLILEFATAEPLRILVGLLHVLFAHLDLF 180
T A +MAW+H+HPF IS+ H+ PG* LLS + EFAT+ ILV L VL AHL LF
Sbjct: 498 TTAPLQMAWRHSHPFHISNSAHMLPG*RLLSLPVSEFATS*R*HILVEPLRVLPAHLALF 319
Query: 181 PSL*SFLWLQIHPFQASVCP*NKHQNCEEVSAV*LLPSHCQHKLLPRHISLERLQQP*DL 360
PS * WLQ HPF A VCP*NKHQNCE V A+ LL SHC KLL S E Q *
Sbjct: 318 PSF*FSWWLQTHPFLAFVCP*NKHQNCEVVLAMQLLSSHCLRKLLLPRTS*EHQQPL*GS 139
Query: 361 QYYHQPL*FASCEE 402
Q QP *F+SC++
Sbjct: 138 QRCRQPQ*FSSCKK 97
Score = 134 bits (287), Expect = 6e-031
Identities = 67/126 (53%), Positives = 79/126 (62%)
Frame = -2 / +2
Query: 395 QEANHSG***YCKSQGCCRRSKEIWRGSNLC*QWEGSNHTAETSSQF*CLFHGHTDA*NG 216
QE NH G* C+ C S+E+ SNL QWE SN A+T+SQF*CLFHGHT+A NG
Sbjct: 104 QEENHCG*RQRCEP*SGCWCSQEVRGRSNLRRQWEESNCIAKTTSQF*CLFHGHTNARNG 283
Query: 215 WI*SHXXXXXXXXXXX*ANRTWRSPTRMRRGSAVANSNISHDSRCYPGDT*TMLEI*NGW 36
W+*SH *A RT R TRM VANS+ +DSR YPG+ * + E+*NGW
Sbjct: 284 WV*SHQENQNDGKRAK*AGRTRRGSTRMC*R*EVANSDTGNDSRRYPGNI*ALFEM*NGW 463
Query: 35 LCFQAI 18
LC QAI
Sbjct: 464 LCLQAI 481
Score = 45.1 bits (92), Expect(2) = 1e-071
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3 / -1
Query: 399 RRLPSVELPTTPFLQCSLSIPPNALCS 479
RRLP+ ELPT+PFL C+LS PP S
Sbjct: 101 RRLPNAELPTSPFLTCALSTPPKTRLS 21
Score = 32.2 bits (64), Expect(2) = 6e-053
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1 / -2
Query: 400 EGCPVLNCRLLHSCNAVYLSHP 465
EG P L+C+ +HS +A YL HP
Sbjct: 100 EGYPTLSCQPVHS*HAPYLLHP 35
Score = 31.3 bits (62), Expect(2) = 5e-079
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2 / +3
Query: 464 GWDR*TALQEWSSRQFNTGQPS 399
GW R* A QEW+ Q + G PS
Sbjct: 36 GWSR*GACQEWTGWQLSVG*PS 101
Score = 23.5 bits (45), Expect(2) = 3e-043
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1 / +2
Query: 465 WVG*INCIAGME*SAIQHWAAF 400
WV *I ++ M+ A Q W AF
Sbjct: 35 WVE*IRRMSRMDWLATQRWVAF 100
>gb|BE215258.1|BE215258 HV_CEb0006E21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006E21f, mRNA sequence
Length = 677
Score = 199 bits (428), Expect(3) = 1e-078
Identities = 83/109 (76%), Positives = 97/109 (88%)
Frame = -3 / +1
Query: 610 QPDSTKLFLLENPKSSVKSNSHIFREYNLNVIMKPLRASMLQVSLQRALGGIDKLHCRNG 431
Q D K+FLLENP +S+KS+S+I RE+NLNVIMKPLRASML+ SL+R LGG+DK H +NG
Sbjct: 298 QSDPPKVFLLENPTNSIKSSSNISREHNLNVIMKPLRASMLEASLRRVLGGVDKAHVKNG 477
Query: 430 VVGNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEA 284
+VGNS LGSLLHK++IIVVDDN VNLKVAAGALKKYGAEV CADSGKE+
Sbjct: 478 LVGNSALGSLLHKRKIIVVDDNAVNLKVAAGALKKYGAEVICADSGKES 624
Score = 157 bits (337), Expect(3) = 1e-056
Identities = 71/105 (67%), Positives = 79/105 (75%)
Frame = +3 / -1
Query: 282 IASFPLSAQVTSAPYFFRAPAATLRFTILSSTTMIRFL*RRLPSVELPTTPFLQCSLSIP 461
+ SFPLSAQ+TSAPYF RAPAATLRFT LSSTTMI L*RRLP+ ELPT+PFL C+LS P
Sbjct: 626 LLSFPLSAQITSAPYFLRAPAATLRFTALSSTTMIFLL*RRLPNAELPTSPFLTCALSTP 447
Query: 462 PNALCSET*SMLARSGFIITFKLYSLNICXXXXXXXXGFSKRNNF 596
P SE S+LARSGF+ITFKL SL+I GFSKR F
Sbjct: 446 PKTRLSEASSILARSGFMITFKLCSLDIFELLLIEFVGFSKRKTF 312
Score = 121 bits (258), Expect(2) = 2e-035
Identities = 57/107 (53%), Positives = 67/107 (62%)
Frame = -2 / +3
Query: 611 SARLYKVISFGEP*KFCQEQFTYIQGI*LECNYEATSCKHASGFATKSIGWDR*TALQEW 432
S R + +SFGEP +F QEQF YIQG *LECN+EA SCK+A G GW R* A QEW
Sbjct: 297 SVRPSEGLSFGEPYEFYQEQFKYIQGA*LECNHEAASCKYA*GLTKAGFGWSR*GACQEW 476
Query: 431 SSRQFNTGQPSSQEANHSG***YCKSQGCCRRSKEIWRGSNLC*QWE 291
+ Q + G PSSQE NH G* C+ C S+E+ SNL QWE
Sbjct: 477 TGWQLSVG*PSSQEENHCG*RQRCEP*SGCWCSQEVRGRSNLRRQWE 617
Score = 119 bits (255), Expect(2) = 2e-037
Identities = 58/109 (53%), Positives = 74/109 (67%)
Frame = +2 / -3
Query: 287 FLPTVSTSYFRAIFL*SACSNLEIYNIIINHYDSLLVKKAAQC*IADYSIPAMQFIYPTQ 466
F PTV +YF + L S S+ +++++++NH D LVKKA Q *+A+ SI M+ IY TQ
Sbjct: 621 FFPTVCANYFCPVLLESTSSHFKVHSVVVNHNDFPLVKKATQR*VANQSILDMRLIYSTQ 442
Query: 467 CSL*RNLKHACTKWLHNYIQVIFPEYM*IALDRTFRVLQKK*LCRVWLI 613
* LKH CTK LH+YIQV+ P Y+* ALDR RVLQKK L RV LI
Sbjct: 441 NPP**GLKHTCTKRLHDYIQVMLPGYI*TALDRIRRVLQKKDLRRV*LI 295
Score = 118 bits (252), Expect = 4e-026
Identities = 57/99 (57%), Positives = 66/99 (66%)
Frame = +1 / -2
Query: 292 SHCQHKLLPRHISLERLQQP*DLQYYHQPL*FASCEEGCPVLNCRLLHSCNAVYLSHPML 471
SHC KLL S E Q * Q QP *F+SCEEG P L+C+ +HS +A YL HP
Sbjct: 616 SHCLRKLLLPRTS*EHQQPL*GSQRCRQPQ*FSSCEEGYPTLSCQPVHS*HAPYLLHPKP 437
Query: 472 FVAKPEACLHEVAS*LHSSYIP*IYVNCS*QNF*GSPKE 588
+ +P+A LHE AS*LHSSY P IY+NCS* N *GSPKE
Sbjct: 436 ALVRPQAYLHEAAS*LHSSYAPWIYLNCS**NS*GSPKE 320
Score = 114 bits (244), Expect = 5e-025
Identities = 57/109 (52%), Positives = 70/109 (64%)
Frame = -1 / +2
Query: 612 ISQTLQSYFFWRTLKVLSRAIHIYSGNIT*M*L*SHFVQACFRFRYKEHWVG*INCIAGM 433
ISQTL+ FFWRTL++LSRA+ IY G+IT*M* *S FVQ C R WV *I ++ M
Sbjct: 296 ISQTLRRSFFWRTLRILSRAVQIYPGSIT*M*S*SRFVQVCLRPH*GGFWVE*IRRMSRM 475
Query: 432 E*SAIQHWAAFFTRSES*WLMIIL*ISRLLQAL*RNMARK*LVLTVGRK 286
+ A Q W AFFTR +S WL L* + L L R+ +K* TVG+K
Sbjct: 476 DWLATQRWVAFFTRGKSLWLTTTL*TLKWLLVLSRSTGQK*FAQTVGKK 622
Score = 105 bits (224), Expect(3) = 1e-078
Identities = 42/59 (71%), Positives = 50/59 (84%)
Frame = -2 / +1
Query: 794 VTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKLVLIDKETWLKESHSMPLLVTKLRN 618
VTKYHLQRLGV+TELT D+ Q I K NC S + +LVL+DKETWLKESHSMP L++KLR+
Sbjct: 115 VTKYHLQRLGVKTELTNDVSQVIPKMNCASLVTRLVLVDKETWLKESHSMPQLLSKLRS 291
Score = 77.1 bits (162), Expect(3) = 1e-056
Identities = 37/62 (59%), Positives = 43/62 (69%)
Frame = +1 / -1
Query: 613 TMFLNLVTKRGMEWDSFSQVSLSMSTSFAICDPQLFLEIY*SRSVVNSV*TPSLCK*YLV 792
++ NL++ G+EWDS SQVSLS STS D Q L I S+VNSV TPSLCK*YLV
Sbjct: 296 SLLRNLLSN*GIEWDSLSQVSLSTSTSLVTSDAQFILGITWLTSLVNSVLTPSLCK*YLV 117
Query: 793 TL 798
TL
Sbjct: 116 TL 111
Score = 56.5 bits (117), Expect(2) = 2e-037
Identities = 27/59 (45%), Positives = 35/59 (59%)
Frame = +3 / -3
Query: 621 PQFSNQKRHGVGFFQPGFFVNEHKLCNL*STIIFRNILI*VSCQFSLNSQSLQMILSNL 797
PQF+ Q RH +GF +PG VN H CN * + RN L + QF +S+ L MIL N+
Sbjct: 288 PQFAKQLRH*MGFLKPGLLVN*H*PCN**CAVHLRNNLAYIIGQFRFDSKPL*MILGNI 112
Score = 47.8 bits (98), Expect(2) = 2e-035
Identities = 26/58 (44%), Positives = 33/58 (56%)
Frame = -3 / +2
Query: 793 LLSIICKDWEFRLN*QLT*ISIFLKIIVDHRLQSLCSLTKKPG*KNPTPCLFWLLN*G 620
L SII K E + N* + * +FL+ H LQ C LT++PG +NP CL L N G
Sbjct: 116 LPSIIYKGLESKRN*PMM*ARLFLR*TAHH*LQG*C*LTRRPGLRNPIQCLNCLANCG 289
Score = 28.6 bits (56), Expect(3) = 1e-078
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -3 / +2
Query: 295 GKEAITLLKPPHNF 254
GK+AI LL PPH+F
Sbjct: 614 GKKAIALLPPPHSF 655
Score = 24.4 bits (47), Expect(3) = 1e-056
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / -2
Query: 254 KIVRRFQQCDCFL 292
K VR ++QC+CFL
Sbjct: 655 KTVRWWEQCNCFL 617
>gb|BM372123.2|BM372123 EBro03_SQ004_B12_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_B12 5', mRNA sequence
Length = 436
Score = 279 bits (604), Expect = 1e-074
Identities = 113/129 (87%), Positives = 122/129 (94%)
Frame = -3 / +3
Query: 388 RIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGF 209
+IIVVDDN VNLKVAAGALKKYGAEV CADSGK+AI LLKPPH+FDACFMDIQMPEMDGF
Sbjct: 3 KIIVVDDNAVNLKVAAGALKKYGAEVICADSGKKAIALLKPPHSFDACFMDIQMPEMDGF 182
Query: 208 EATKRIRVMERDLNEQIERGEAPPECVGVRQWRTPILAMTADVIQATHEQCLKSEMDGYV 29
EATKRIR+MER+LNE++ERGEAPPEC VR+WRTPILAMTADVIQAT+E CLK EMDGYV
Sbjct: 183 EATKRIRMMERELNERVERGEAPPECANVRRWRTPILAMTADVIQATYEHCLKCEMDGYV 362
Query: 28 SKPFEGEQL 2
SKPFEGEQL
Sbjct: 363 SKPFEGEQL 389
Score = 241 bits (521), Expect = 3e-063
Identities = 108/128 (84%), Positives = 112/128 (87%)
Frame = +3 / -1
Query: 3 NCSPSNGLET*PSISDFKHCSCVAWITSAVMANIGVRHCRTPTHSGGASPRSICSFRSLS 182
NCSPSNGLET*PSIS FK CS VAWITSAV+A+IGVRH T HSGGASPRS SF SLS
Sbjct: 388 NCSPSNGLET*PSISHFKQCSYVAWITSAVIASIGVRHLLTLAHSGGASPRSTRSFSSLS 209
Query: 183 ITLILFVASNPSISGICMSMKQASKL*GGFSSVIASFPLSAQVTSAPYFFRAPAATLRFT 362
I LIL VASNPSISGICMSMKQASKL*GGFS+ IA FPLSAQ+TSAPYF RAPAATLRFT
Sbjct: 208 IILILLVASNPSISGICMSMKQASKL*GGFSNAIAFFPLSAQITSAPYFLRAPAATLRFT 29
Query: 363 ILSSTTMI 386
LSSTTMI
Sbjct: 28 ALSSTTMI 5
Score = 192 bits (414), Expect = 2e-048
Identities = 74/128 (57%), Positives = 92/128 (71%)
Frame = +2 / -3
Query: 2 QLLALEWLGNITIHFRFQALFMCRLDNICCHG*YWSSPLPNPYAFWWGFSTFYLLI*ISF 181
QLL +WLG+I IHF FQ + +C LDN+CCH Y SSP PN FWW S FY LI*+SF
Sbjct: 389 QLLPFKWLGDIAIHFTFQTVLICCLDNVCCHCQYRSSPPPNVSTFWWSLSAFYPLI*LSF 210
Query: 182 HHSNPFCGFKSIHFRHLYVHETSIKIVRRFQQCDCFLPTVSTSYFRAIFL*SACSNLEIY 361
HHS+ GFK IHF HLYVHETSIK VR F QC+CFLPTV +YF + L S S+ +++
Sbjct: 209 HHSDSLGGFKPIHFWHLYVHETSIKTVRWF*QCNCFLPTVCANYFCPVLLESTSSHFKVH 30
Query: 362 NIIINHYD 385
++++NH D
Sbjct: 29 SVVVNHND 6
Score = 166 bits (358), Expect = 1e-040
Identities = 75/129 (58%), Positives = 89/129 (68%)
Frame = -1 / +1
Query: 387 ES*WLMIIL*ISRLLQAL*RNMARK*LVLTVGRKQSHC*NLLTILMLVSWTYRCLKWMDL 208
+S WL L* + L L R+ +K* TVGRKQ HC*N LT+LMLVSWTY+C KWM L
Sbjct: 4 KSLWLTTTL*TLKWLLVLSRSTGQK*FAQTVGRKQLHC*NHLTVLMLVSWTYKCQKWMGL 183
Query: 207 KPQKGLE*WKEI*MSK*NVEKPHQNA*GFGSGELQY*P*QQMLSRRHMNNA*NLKWMVMF 28
KP + E*WKE *MS *N E+ HQN G GEL+Y *QQ LSR+HM+ *N+KWM M
Sbjct: 184 KPPRESE*WKES*MSG*NAERLHQNVLTLGGGELRYWQ*QQTLSRQHMSTV*NVKWMAMS 363
Query: 27 PSHSRASNC 1
PSH + S+C
Sbjct: 364 PSHLKGSSC 390
Score = 144 bits (308), Expect = 8e-034
Identities = 73/130 (56%), Positives = 82/130 (63%)
Frame = +1 / -2
Query: 1 TIARPRMAWKHNHPFQISSIVHVSPG*HLLSWLILEFATAEPLRILVGLLHVLFAHLDLF 180
T A +MAW+H+HPF IS+ H+ PG* LLS + EFAT+ ILV L VL AHL LF
Sbjct: 390 TTAPLQMAWRHSHPFHISNSAHMLPG*RLLSLPVSEFATS*R*HILVEPLRVLPAHLALF 211
Query: 181 PSL*SFLWLQIHPFQASVCP*NKHQNCEEVSAV*LLPSHCQHKLLPRHISLERLQQP*DL 360
PS * WLQ HPF A VCP*NKHQNCE V A+ LL SHC KLL S E Q *
Sbjct: 210 PSF*FSWWLQTHPFLAFVCP*NKHQNCEVVLAMQLLSSHCLRKLLLPRTS*EHQQPL*GS 31
Query: 361 QYYHQPL*FA 390
Q QP *F+
Sbjct: 30 QRCRQPQ*FS 1
Score = 130 bits (278), Expect = 1e-029
Identities = 65/123 (52%), Positives = 77/123 (62%)
Frame = -2 / +2
Query: 386 NHSG***YCKSQGCCRRSKEIWRGSNLC*QWEGSNHTAETSSQF*CLFHGHTDA*NGWI* 207
NH G* C+ C S+E+ SNL QWE SN A+T+SQF*CLFHGHT+A NGW+*
Sbjct: 5 NHCG*RQRCEP*SGCWCSQEVRGRSNLRRQWEESNCIAKTTSQF*CLFHGHTNARNGWV* 184
Query: 206 SHXXXXXXXXXXX*ANRTWRSPTRMRRGSAVANSNISHDSRCYPGDT*TMLEI*NGWLCF 27
SH *A RT R TRM VANS+ +DSR YPG+ * + E+*NGWLC
Sbjct: 185 SHQENQNDGKRAK*AGRTRRGSTRMC*R*EVANSDTGNDSRRYPGNI*ALFEM*NGWLCL 364
Query: 26 QAI 18
QAI
Sbjct: 365 QAI 373
>gb|BJ477369.1|BJ477369 BJ477369 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38p18 3', mRNA sequence
Length = 731
Score = 105 bits (224), Expect(2) = 4e-039
Identities = 40/58 (68%), Positives = 49/58 (84%)
Frame = -3 / -2
Query: 352 KVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVME 179
+VAAG LKKYGA+V C +SGK+A+ LL+ PH FD C MDIQMPEMDGFEAT++IR +E
Sbjct: 730 RVAAGTLKKYGAKVXCVESGKDALELLQAPHKFDLCLMDIQMPEMDGFEATRQIRAIE 557
Score = 76.2 bits (160), Expect(2) = 4e-039
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -3 / -2
Query: 115 WRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
W P+LAMTADVIQATHE+C K+ MDGYVSKPFE +QL
Sbjct: 499 WHLPVLAMTADVIQATHEECTKNGMDGYVSKPFEEKQL 386
Score = 72.1 bits (151), Expect(2) = 8e-022
Identities = 36/58 (62%), Positives = 39/58 (67%)
Frame = +3 / +3
Query: 180 SITLILFVASNPSISGICMSMKQASKL*GGFSSVIASFPLSAQVTSAPYFFRAPAATL 353
SI I VASNPSISGI +S++Q S L G S ASFPLS T APYFF PAATL
Sbjct: 558 SIARICRVASNPSISGI*ISIRQRSNLCGACRSSRASFPLSTHXTFAPYFFSVPAATL 731
Score = 51.5 bits (106), Expect(2) = 8e-022
Identities = 23/38 (60%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 3 NCSPSNGLET*PSISDFKHCSCVAWITSAVMANIGVRH 116
NC S G ET*PSI F H S VAW+TSAV+A G H
Sbjct: 387 NCFSSKGFET*PSIPFFVHSSWVAWMTSAVIARTGRCH 500
>gb|BQ766121.1|BQ766121 EBro08_SQ005_I02_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ005_I02 5', mRNA sequence
Length = 685
Score = 130 bits (279), Expect(2) = 1e-032
Identities = 54/82 (65%), Positives = 65/82 (79%)
Frame = -3 / +3
Query: 424 GNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDAC 245
G +L +LL K I+VVDDN VNL+VAAG LKKYGA+V C +SGK+A+ LL+ PH FD C
Sbjct: 396 GPDSLYALLLGKNILVVDDNKVNLRVAAGTLKKYGAKVECVESGKDALELLQAPHKFDLC 575
Query: 244 FMDIQMPEMDGFEATKRIRVME 179
MDIQMPEMDGFEAT+ IR +E
Sbjct: 576 LMDIQMPEMDGFEATRXIRAIE 641
Score = 31.3 bits (62), Expect(2) = 1e-032
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2 / +3
Query: 794 VTKYHLQRLGVQTELTTDLDQYIS 723
VT+YHLQRLG+ ++ ++Q +S
Sbjct: 3 VTEYHLQRLGIASKSVRTIEQALS 74
>gb|BJ473916.1|BJ473916 BJ473916 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17l08 3', mRNA sequence
Length = 650
Score = 76.2 bits (160), Expect(2) = 4e-027
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -3 / -2
Query: 115 WRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
W P+LAMTADVIQATHE+C K+ MDGYVSKPFE +QL
Sbjct: 487 WHLPVLAMTADVIQATHEECTKNGMDGYVSKPFEEKQL 374
Score = 65.2 bits (136), Expect(2) = 4e-027
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -3 / -2
Query: 283 ITLLKPPHNFDACFMDIQMPEMDGFEATKRIRVME 179
+ LL+ PH FD C MDIQMPEMDGFEAT++IR +E
Sbjct: 649 LELLQAPHKFDLCLMDIQMPEMDGFEATRQIRAIE 545
>gb|CA007616.1|CA007616 HU08I04r HU Hordeum vulgare subsp. vulgare cDNA clone HU08I04
5-PRIME, mRNA sequence
Length = 622
Score = 105 bits (224), Expect(2) = 9e-026
Identities = 42/59 (71%), Positives = 50/59 (84%)
Frame = -2 / +1
Query: 794 VTKYHLQRLGVQTELTTDLDQYISKNNCGSQIAKLVLIDKETWLKESHSMPLLVTKLRN 618
VTKYHLQRLGV+TELT D+ Q I K NC S + +LVL+DKETWLKESHSMP L++KLR+
Sbjct: 394 VTKYHLQRLGVKTELTNDVSQVIPKMNCASLVTRLVLVDKETWLKESHSMPQLLSKLRS 570
Score = 31.3 bits (62), Expect(2) = 9e-026
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -1 / +2
Query: 612 ISQTLQSYFFWRTLKV 565
ISQTL+ FFWRTL++
Sbjct: 575 ISQTLRRSFFWRTLRI 622
>gb|BF627502.2|BF627502 HVSMEb0005A12f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005A12f, mRNA sequence
Length = 773
Score = 114 bits (243), Expect = 7e-025
Identities = 47/71 (66%), Positives = 56/71 (78%)
Frame = -3 / +3
Query: 424 GNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDAC 245
G +L +LL K I+VVDDN VNL+VAAG LKKYGA+V C +SGK+A+ LL+ PH FD C
Sbjct: 270 GPDSLYALLLGKNILVVDDNKVNLRVAAGTLKKYGAKVECVESGKDALELLQAPHKFDLC 449
Query: 244 FMDIQMPEMDG 212
MDIQMPEMDG
Sbjct: 450 LMDIQMPEMDG 482
>gb|BJ473186.1|BJ473186 BJ473186 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38p18 5', mRNA sequence
Length = 721
Score = 104 bits (221), Expect(2) = 1e-024
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = -3 / +1
Query: 424 GNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDAC 245
G +L +LL K I+VVDDN VNL+VAAG LKKYGA+V C +SGK+A+ LL+ PH FD C
Sbjct: 520 GPDSLYALLLGKNILVVDDNKVNLRVAAGTLKKYGAKVECVESGKDALELLQAPHKFDLC 699
Query: 244 FMDIQMP 224
MDIQMP
Sbjct: 700 LMDIQMP 720
Score = 31.3 bits (62), Expect(2) = 1e-024
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2 / +1
Query: 794 VTKYHLQRLGVQTELTTDLDQYIS 723
VT+YHLQRLG+ ++ ++Q +S
Sbjct: 127 VTEYHLQRLGIASKSVRTIEQALS 198
>gb|BJ471300.1|BJ471300 BJ471300 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17l08 5', mRNA sequence
Length = 723
Score = 94.5 bits (200), Expect(2) = 7e-022
Identities = 39/63 (61%), Positives = 48/63 (76%)
Frame = -3 / +1
Query: 424 GNSTLGSLLHKKRIIVVDDNIVNLKVAAGALKKYGAEVTCADSGKEAITLLKPPHNFDAC 245
G +L +LL K I+VVDDN VNL+VAAG LKKYGA+V C +SGK+A+ LL+ PH FD C
Sbjct: 535 GPDSLYALLLGKNILVVDDNKVNLRVAAGTLKKYGAKVECVESGKDALELLQAPHKFDLC 714
Query: 244 FMD 236
MD
Sbjct: 715 LMD 723
Score = 31.3 bits (62), Expect(2) = 7e-022
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2 / +1
Query: 794 VTKYHLQRLGVQTELTTDLDQYIS 723
VT+YHLQRLG+ ++ ++Q +S
Sbjct: 142 VTEYHLQRLGIASKSVRTIEQALS 213
>gb|AV832952.1|AV832952 AV832952 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare top three leaves adult, heading stage Hordeum
vulgare subsp. vulgare cDNA clone baal4h11, mRNA
sequence
Length = 622
Score = 76.2 bits (160), Expect(2) = 4e-021
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -3 / -3
Query: 115 WRTPILAMTADVIQATHEQCLKSEMDGYVSKPFEGEQL 2
W P+LAMTADVIQATHE+C K+ MDGYVSKPFE +QL
Sbjct: 500 WHLPVLAMTADVIQATHEECTKNGMDGYVSKPFEEKQL 387
Score = 45.1 bits (92), Expect(2) = 4e-021
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = -3 / -3
Query: 241 MDIQMPEMDGFEATKRIRVME 179
MDIQMPEMDGFEAT++IR +E
Sbjct: 620 MDIQMPEMDGFEATRQIRAIE 558
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 384,668,372
Number of Sequences: 312970
Number of extensions: 5931906
Number of successful extensions: 34254
Number of sequences better than 1.0e-020: 21
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 8968096407
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)