TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3115139.2.1
(1079 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE456124.3|BE456124 HVSMEg0019N22f Hordeum vulgare pre-a... 485 e-136
gb|BE060930.3|BE060930 HVSMEg0013N24f Hordeum vulgare pre-a... 362 2e-099
gb|BE455566.2|BE455566 HVSMEg0017N13f Hordeum vulgare pre-a... 342 2e-093
gb|BM816674.1|BM816674 HB01C06_T3.ab1 HB Hordeum vulgare su... 125 1e-058
gb|BU986537.1|BU986537 HF12C17r HF Hordeum vulgare subsp. v... 125 2e-055
gb|BQ470739.1|BQ470739 HX03O06r HX Hordeum vulgare subsp. v... 125 2e-055
gb|BF255832.2|BF255832 HVSMEf0007P02f Hordeum vulgare seedl... 125 4e-055
gb|AW982651.2|AW982651 HVSMEg0003N13f Hordeum vulgare pre-a... 125 3e-052
gb|AL505150.1|AL505150 AL505150 Hordeum vulgare Barke roots... 123 5e-046
gb|BG343487.1|BG343487 HVSMEg0005O08f Hordeum vulgare pre-a... 125 8e-046
gb|AV934049.1|AV934049 AV934049 K. Sato unpublished cDNA li... 120 9e-043
gb|BG418662.2|BG418662 HVSMEk0023M18f Hordeum vulgare testa... 119 5e-040
gb|BQ460124.1|BQ460124 HA07C19r HA Hordeum vulgare subsp. v... 125 2e-039
gb|BU986380.1|BU986380 HF11K09r HF Hordeum vulgare subsp. v... 125 2e-039
gb|BQ467571.1|BQ467571 HS04D07r HS Hordeum vulgare subsp. v... 125 2e-039
gb|AV934152.1|AV934152 AV934152 K. Sato unpublished cDNA li... 120 2e-039
gb|AV913567.1|AV913567 AV913567 K. Sato unpublished cDNA li... 125 3e-039
gb|AV926665.1|AV926665 AV926665 K. Sato unpublished cDNA li... 125 3e-039
gb|BU973416.1|BU973416 HB24O01r BC Hordeum vulgare subsp. v... 122 8e-039
gb|BG416654.1|BG416654 HVSMEk0014A07f Hordeum vulgare testa... 119 9e-039
gb|CK124748.1|CK124748 BES1824110d17 BES1824 Hordeum vulgar... 119 7e-038
gb|BG418564.2|BG418564 HVSMEk0023C20f Hordeum vulgare testa... 119 8e-038
gb|BG414416.1|BG414416 HVSMEk0002H01f Hordeum vulgare testa... 120 9e-038
gb|BI960699.1|BI960699 HVSMEn0025O19f Hordeum vulgare rachi... 66 8e-037
gb|BI955632.1|BI955632 HVSMEm0023N15f Hordeum vulgare green... 114 8e-037
gb|BJ544054.1|BJ544054 BJ544054 K. Sato unpublished cDNA li... 120 8e-037
gb|BE455022.2|BE455022 HVSMEh0095O05f Hordeum vulgare 5-45 ... 119 1e-036
gb|BE196379.3|BE196379 HVSMEh0092C06f Hordeum vulgare 5-45 ... 125 2e-036
gb|BE194523.2|BE194523 HVSMEh0085O04f Hordeum vulgare 5-45 ... 119 1e-035
gb|BF253936.2|BF253936 HVSMEf0002I16f Hordeum vulgare seedl... 125 5e-035
gb|CA020126.1|CA020126 HV14G15r HV Hordeum vulgare subsp. v... 125 5e-035
gb|BQ459797.1|BQ459797 HA08A23r HA Hordeum vulgare subsp. v... 125 5e-035
gb|BF628107.2|BF628107 HVSMEb0003C11f Hordeum vulgare seedl... 125 5e-035
gb|CA002692.1|CA002692 HS08E02r HS Hordeum vulgare subsp. v... 125 5e-035
gb|CA021911.1|CA021911 HZ41I09r HZ Hordeum vulgare subsp. v... 125 5e-035
gb|BG415143.1|BG415143 HVSMEk0005F01f Hordeum vulgare testa... 119 6e-035
gb|BG418101.2|BG418101 HVSMEk0021F02f Hordeum vulgare testa... 119 7e-035
gb|BQ458877.1|BQ458877 HA02P13r HA Hordeum vulgare subsp. v... 119 4e-034
gb|BG414757.2|BG414757 HVSMEk0003J21f Hordeum vulgare testa... 119 7e-034
gb|BF259786.2|BF259786 HVSMEf0020E05f Hordeum vulgare seedl... 121 8e-034
gb|BE454559.2|BE454559 HVSMEh0094E03f Hordeum vulgare 5-45 ... 120 1e-033
gb|BF265665.2|BF265665 HV_CEa0013A06f Hordeum vulgare seedl... 120 1e-033
gb|BU980158.1|BU980158 HA18N13r HA Hordeum vulgare subsp. v... 125 1e-033
gb|BE519901.1|BE519901 HV_CEb0021K08f Hordeum vulgare seedl... 62 2e-033
gb|BJ463463.1|BJ463463 BJ463463 K. Sato unpublished cDNA li... 104 3e-033
gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedl... 104 3e-033
gb|BE601965.2|BE601965 HVSMEh0100J12f Hordeum vulgare 5-45 ... 102 4e-033
gb|BG415963.1|BG415963 HVSMEk0009D15f Hordeum vulgare testa... 119 4e-033
gb|BJ464137.1|BJ464137 BJ464137 K. Sato unpublished cDNA li... 104 5e-033
gb|AL506722.1|AL506722 AL506722 Hordeum vulgare Barke devel... 104 6e-033
gb|BG344152.2|BG344152 HVSMEg0007N17f Hordeum vulgare pre-a... 63 2e-032
gb|BI960557.1|BI960557 HVSMEn0025A09f Hordeum vulgare rachi... 63 5e-032
gb|CV063066.1|CV063066 BNEL86c3 Barley EST endosperm librar... 87 2e-031
gb|BG365391.1|BG365391 HVSMEi0002I06f Hordeum vulgare 20 DA... 68 3e-031
gb|CK125597.1|CK125597 BES1824109c14 BES1824 Hordeum vulgar... 119 4e-031
gb|BF065218.2|BF065218 HV_CEb0024E13f Hordeum vulgare seedl... 56 5e-031
gb|BG415421.2|BG415421 HVSMEk0006G24f Hordeum vulgare testa... 118 1e-030
gb|CA004617.1|CA004617 HS18C15r HS Hordeum vulgare subsp. v... 125 1e-030
gb|BF066116.1|BF066116 HV_CEb0014O07f Hordeum vulgare seedl... 62 2e-030
gb|BF066138.1|BF066138 HV_CEb0014P07f Hordeum vulgare seedl... 62 2e-030
gb|BI958105.1|BI958105 HVSMEn0013G15f Hordeum vulgare rachi... 63 2e-030
gb|BF258617.2|BF258617 HVSMEf0016D02f Hordeum vulgare seedl... 111 4e-030
gb|BG415394.2|BG415394 HVSMEk0006F01f Hordeum vulgare testa... 86 4e-030
gb|BG301229.1|BG301229 HVSMEb0020B01f Hordeum vulgare seedl... 63 1e-029
gb|CA022119.1|CA022119 HZ42D14r HZ Hordeum vulgare subsp. v... 85 3e-029
gb|BM373176.2|BM373176 EBma04_SQ003_G09_R maternal, 10 DPA,... 119 3e-029
gb|BQ763022.1|BQ763022 EBro02_SQ006_M20_R root, 3 week, hyd... 117 4e-029
gb|AL507080.1|AL507080 AL507080 Hordeum vulgare Barke devel... 99 6e-029
gb|CA032017.1|CA032017 HX11M09r HX Hordeum vulgare subsp. v... 107 4e-028
gb|BI777845.2|BI777845 EBro08_SQ002_E16_R root, 3 week, dro... 118 4e-028
gb|CA027702.1|CA027702 HZ59M02r HZ Hordeum vulgare subsp. v... 91 4e-028
gb|BF263685.3|BF263685 HV_CEa0007G08f Hordeum vulgare seedl... 62 1e-027
gb|BI958218.1|BI958218 HVSMEn0013O24f Hordeum vulgare rachi... 123 2e-027
gb|BI959031.1|BI959031 HVSMEn0017M21f Hordeum vulgare rachi... 57 2e-027
gb|AL450961.1|AL450961 AL450961 Hordeum vulgare Barke etiol... 61 3e-027
gb|BE454821.3|BE454821 HVSMEh0095D03f Hordeum vulgare 5-45 ... 119 4e-027
gb|BM373054.2|BM373054 EBma04_SQ002_O16_R maternal, 10 DPA,... 119 4e-027
gb|BM098777.2|BM098777 EBpi05_SQ002_A12_R pistil, 8 DPA, no... 119 4e-027
gb|BQ760073.1|BQ760073 EBpi07_SQ003_J03_R pistil, 12 DPA, n... 119 4e-027
gb|AL508144.1|AL508144 AL508144 Hordeum vulgare Barke devel... 119 5e-027
gb|BM374136.2|BM374136 EBma03_SQ003_M01_R maternal, 8 DPA, ... 119 6e-027
gb|BQ766677.1|BQ766677 EBro08_SQ006_F23_R root, 3 week, dro... 61 7e-027
gb|BI953687.1|BI953687 HVSMEm0013N22f Hordeum vulgare green... 77 1e-026
gb|BG414602.1|BG414602 HVSMEk0003A18f Hordeum vulgare testa... 120 1e-026
gb|AV934159.1|AV934159 AV934159 K. Sato unpublished cDNA li... 120 2e-026
gb|BJ464456.1|BJ464456 BJ464456 K. Sato unpublished cDNA li... 65 2e-026
gb|BQ763369.1|BQ763369 EBro02_SQ008_J04_R root, 3 week, hyd... 63 2e-026
gb|BE602882.1|BE602882 HVSMEh0100J05f Hordeum vulgare 5-45 ... 119 2e-026
gb|BG417852.1|BG417852 HVSMEk0019M01f Hordeum vulgare testa... 119 2e-026
gb|BG418507.1|BG418507 HVSMEk0022O17f Hordeum vulgare testa... 119 2e-026
gb|BM099821.2|BM099821 EBes01_SQ004_F24_R embryo sac, 4-6 D... 119 2e-026
gb|BM099969.2|BM099969 EBes01_SQ004_M17_R embryo sac, 4-6 D... 119 2e-026
gb|BI776379.2|BI776379 EBpi05_SQ001_B03_R pistil, 8 DPA, no... 119 2e-026
gb|BU980172.1|BU980172 HA18O07r HA Hordeum vulgare subsp. v... 119 2e-026
gb|BF265663.2|BF265663 HV_CEa0013A04f Hordeum vulgare seedl... 100 3e-026
gb|BJ468735.1|BJ468735 BJ468735 K. Sato unpublished cDNA li... 57 3e-026
gb|AV915311.1|AV915311 AV915311 K. Sato unpublished cDNA li... 104 4e-026
gb|CV054175.1|CV054175 BNEL107f1 Barley EST endosperm libra... 68 4e-026
gb|AL508824.1|AL508824 AL508824 Hordeum vulgare Barke devel... 62 4e-026
gb|BG415622.2|BG415622 HVSMEk0007D09f Hordeum vulgare testa... 73 5e-026
gb|CK123698.1|CK123698 BES1824105b24 BES1824 Hordeum vulgar... 118 6e-026
gb|BF259291.3|BF259291 HVSMEf0018M18f Hordeum vulgare seedl... 94 9e-026
gb|AL505019.1|AL505019 AL505019 Hordeum vulgare Barke roots... 66 1e-025
gb|BM442873.2|BM442873 EBro02_SQ001_K13_R root, 3 week, hyd... 117 1e-025
gb|BQ763026.1|BQ763026 EBro02_SQ006_N19_R root, 3 week, hyd... 117 1e-025
gb|BM816368.1|BM816368 HB02H12_T3.ab1 HB Hordeum vulgare su... 62 1e-025
gb|CA031581.1|CA031581 HX10G17r HX Hordeum vulgare subsp. v... 107 2e-025
gb|BU989665.1|BU989665 HF22F21r HF Hordeum vulgare subsp. v... 84 2e-025
gb|CA022672.1|CA022672 HZ44A09r HZ Hordeum vulgare subsp. v... 99 2e-025
gb|CA021688.1|CA021688 HZ40M24r HZ Hordeum vulgare subsp. v... 99 2e-025
gb|CA024529.1|CA024529 HZ49J01r HZ Hordeum vulgare subsp. v... 99 2e-025
gb|CA025466.1|CA025466 HZ52D24r HZ Hordeum vulgare subsp. v... 99 2e-025
gb|CA026014.1|CA026014 HZ53N10r HZ Hordeum vulgare subsp. v... 99 2e-025
gb|CA028522.1|CA028522 HZ62E15r HZ Hordeum vulgare subsp. v... 99 2e-025
gb|BG415589.2|BG415589 HVSMEk0007B19f Hordeum vulgare testa... 114 2e-025
gb|AL507235.1|AL507235 AL507235 Hordeum vulgare Barke devel... 116 2e-025
gb|CA013420.1|CA013420 HT08G10r HT Hordeum vulgare subsp. v... 72 3e-025
gb|CA014495.1|CA014495 HT11I05r HT Hordeum vulgare subsp. v... 60 3e-025
gb|BE215940.1|BE215940 HV_CEb0008O10f Hordeum vulgare seedl... 62 5e-025
gb|CA007645.1|CA007645 HU08J12r HU Hordeum vulgare subsp. v... 104 1e-024
gb|CA013907.1|CA013907 HT09N23r HT Hordeum vulgare subsp. v... 68 1e-024
gb|BU996119.1|BU996119 HM12I01r HM Hordeum vulgare subsp. v... 61 1e-024
gb|BG299416.1|BG299416 HVSMEa0019O06f Hordeum vulgare seedl... 62 1e-024
gb|AL503986.1|AL503986 AL503986 Hordeum vulgare Barke roots... 66 2e-024
gb|BE215014.1|BE215014 HV_CEb0005I17f Hordeum vulgare seedl... 104 5e-024
gb|BM816369.1|BM816369 HC114C06_SK.ab1 HC Hordeum vulgare s... 51 7e-024
gb|BG310404.1|BG310404 HVSMEc0018H08f Hordeum vulgare seedl... 61 9e-024
gb|BE602876.2|BE602876 HVSMEh0100H17f Hordeum vulgare 5-45 ... 104 1e-023
gb|AV925423.1|AV925423 AV925423 K. Sato unpublished cDNA li... 60 1e-023
gb|AV936403.1|AV936403 AV936403 K. Sato unpublished cDNA li... 80 1e-023
gb|AV936300.1|AV936300 AV936300 K. Sato unpublished cDNA li... 80 1e-023
gb|AV936413.1|AV936413 AV936413 K. Sato unpublished cDNA li... 80 1e-023
gb|BI950383.1|BI950383 HVSMEl0020H16f Hordeum vulgare spike... 110 2e-023
gb|BM097482.2|BM097482 EBro05_SQ003_L07_R root, 3 week, red... 68 2e-023
gb|BF629372.2|BF629372 HVSMEb0012B02f Hordeum vulgare seedl... 62 3e-023
gb|AV836450.1|AV836450 AV836450 K. Sato unpublished cDNA li... 68 5e-023
gb|CA023175.1|CA023175 HZ45H08r HZ Hordeum vulgare subsp. v... 108 5e-023
gb|BQ463596.1|BQ463596 HI05N09r HI Hordeum vulgare subsp. v... 99 5e-023
gb|BG343982.1|BG343982 HVSMEg0007E19f Hordeum vulgare pre-a... 92 7e-023
gb|AL503414.1|AL503414 AL503414 Hordeum vulgare Barke roots... 108 7e-023
gb|BU986702.1|BU986702 HF12K17r HF Hordeum vulgare subsp. v... 108 7e-023
gb|BG415627.1|BG415627 HVSMEk0007E01f Hordeum vulgare testa... 103 7e-023
gb|BU989611.1|BU989611 HF22D10r HF Hordeum vulgare subsp. v... 103 7e-023
gb|AV914608.1|AV914608 AV914608 K. Sato unpublished cDNA li... 104 9e-023
gb|BI960410.1|BI960410 HVSMEn0024I04f Hordeum vulgare rachi... 73 9e-023
gb|BI958488.1|BI958488 HVSMEn0015E11f Hordeum vulgare rachi... 71 9e-023
gb|BU985911.1|BU985911 HF08P24r HF Hordeum vulgare subsp. v... 107 1e-022
gb|BG369168.1|BG369168 HVSMEi0022M03f Hordeum vulgare 20 DA... 66 1e-022
gb|CA028585.1|CA028585 HZ62I09r HZ Hordeum vulgare subsp. v... 92 2e-022
gb|BI957975.1|BI957975 HVSMEn0012L23f Hordeum vulgare rachi... 61 2e-022
gb|BG418326.2|BG418326 HVSMEk0022F08f Hordeum vulgare testa... 103 2e-022
gb|AV911222.1|AV911222 AV911222 K. Sato unpublished cDNA li... 77 2e-022
gb|BU968989.1|BU968989 HB10D02r BC Hordeum vulgare subsp. v... 103 2e-022
gb|BE196376.3|BE196376 HVSMEh0092C03f Hordeum vulgare 5-45 ... 62 2e-022
gb|BQ464700.1|BQ464700 HU01A05T HU Hordeum vulgare subsp. v... 61 3e-022
gb|BU987846.1|BU987846 HF15O20r HF Hordeum vulgare subsp. v... 84 4e-022
gb|AV913390.1|AV913390 AV913390 K. Sato unpublished cDNA li... 90 8e-022
gb|CA015542.1|CA015542 HT14K06r HT Hordeum vulgare subsp. v... 58 9e-022
gb|AV913397.1|AV913397 AV913397 K. Sato unpublished cDNA li... 90 1e-021
gb|BG416445.2|BG416445 HVSMEk0012E19f Hordeum vulgare testa... 104 1e-021
gb|CA011608.1|CA011608 HT03A12r HT Hordeum vulgare subsp. v... 104 1e-021
gb|AV931570.1|AV931570 AV931570 K. Sato unpublished cDNA li... 69 1e-021
gb|BG418655.1|BG418655 HVSMEk0023L22f Hordeum vulgare testa... 103 2e-021
gb|BG415939.2|BG415939 HVSMEk0009B24f Hordeum vulgare testa... 103 2e-021
gb|BM097043.2|BM097043 EBpi07_SQ002_D13_R pistil, 12 DPA, n... 103 2e-021
gb|CV063107.1|CV063107 BNEL86g1 Barley EST endosperm librar... 51 2e-021
gb|BJ452084.1|BJ452084 BJ452084 K. Sato unpublished cDNA li... 62 3e-021
gb|BI947788.1|BI947788 HVSMEl0006P04f Hordeum vulgare spike... 99 3e-021
gb|BE214157.3|BE214157 HV_CEb0002H13f Hordeum vulgare seedl... 51 3e-021
gb|BG414733.1|BG414733 HVSMEk0003H17f Hordeum vulgare testa... 62 6e-021
gb|BU974025.1|BU974025 HB26K23r BC Hordeum vulgare subsp. v... 60 6e-021
gb|BI958862.1|BI958862 HVSMEn0016O20f Hordeum vulgare rachi... 63 7e-021
gb|BI959591.1|BI959591 HVSMEn0020F03f Hordeum vulgare rachi... 60 8e-021
gb|BG369084.2|BG369084 HVSMEi0021K17f Hordeum vulgare 20 DA... 69 9e-021
gb|BJ450325.1|BJ450325 BJ450325 K. Sato unpublished cDNA li... 76 1e-020
>gb|BE456124.3|BE456124 HVSMEg0019N22f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019N22f, mRNA sequence
Length = 873
Score = 485 bits (1053), Expect = e-136
Identities = 199/284 (70%), Positives = 230/284 (80%)
Frame = +1 / +1
Query: 4 ANTAKGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQL 183
ANT+KGKVCVTGASGF+ASWLVKRLLESGYHVLGTVRDPGN KKV HLW L GAKERL+L
Sbjct: 16 ANTSKGKVCVTGASGFVASWLVKRLLESGYHVLGTVRDPGNQKKVAHLWNLAGAKERLEL 195
Query: 184 VRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSKEEMLDSAINGTMNVLRSCKKNPXXX 363
VRADLLEEGSFDDAVMACEGVFHTASP++T ++SKEEMLDSAINGT+NVLRSCKKNP
Sbjct: 196 VRADLLEEGSFDDAVMACEGVFHTASPIITNADSKEEMLDSAINGTLNVLRSCKKNPFLK 375
Query: 364 XXXXXXXXXXXXIKDEADLPPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGE 543
++DEA+ PPNVLLDE+SWSS+EFCES+QIWYAVAKILAEK+AWEFA E
Sbjct: 376 RVVLTSSSSTVRLRDEAEFPPNVLLDETSWSSVEFCESIQIWYAVAKILAEKSAWEFAKE 555
Query: 544 HRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQGETGKFTTYGRMGYVHIDDVARCHML 723
+ IDLV VLPTFVVGP LSP L PTAS+VLGLF+GET KFT R GYVH+D++A C +L
Sbjct: 556 NNIDLVAVLPTFVVGPNLSPVLAPTASNVLGLFKGETEKFTHLRRNGYVHLDELASCPIL 735
Query: 724 AYEAAGARGRYICSAAVLDCGDLAALLARRFPAYPVPRSLPRAY 855
+Y+ RG IC+ A L L LL +R PA+P+P+ + +
Sbjct: 736 SYKTRAPRGGTICNLAGLWFDQLVPLLPKRVPAFPIPKKFAQNF 867
Score = 373 bits (808), Expect = e-102
Identities = 178/278 (64%), Positives = 192/278 (69%)
Frame = -1 / -2
Query: 836 LGTGYAGNXXXXXXXXXXXXXXXALQMYLPRAPAASYASMWHLATSSMWTYPILPYVVNF 657
LG G AG LQ+ P M LA+SS TYP L VNF
Sbjct: 848 LGMGKAGTLFGSRGTSWSNHRPARLQIVPPLGARVL*DKMGQLASSSK*TYPFLRRWVNF 669
Query: 656 PVSPWNRPRTSEAVGPSSGDRVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHIWR 477
VSP N+PRT EAVG ++G+R+GPTT VGRT TRS+L S ANSQA FSARI ATAYHIW
Sbjct: 668 SVSPLNKPRTFEAVGANTGERLGPTTNVGRTATRSMLFSLANSQADFSARILATAYHIWM 489
Query: 476 LSQNSMELHDDXXXXXXXXXXXXXLILTVDDEDVRTTLLSDGFFLHERSTFIVPFIAESS 297
LSQNS ELHD L LTVDD+DVRTTLL +GFFL + STF VPFIAESS
Sbjct: 488 LSQNSTELHDVSSSSTLGGNSASSLSLTVDDDDVRTTLLRNGFFLQDLSTFRVPFIAESS 309
Query: 296 ISSLELDPVTTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPG 117
ISSLE V GDAVWKTPSQAITASSKLPSSKRSALTS SLS AP++ QRC TF PG
Sbjct: 308 ISSLESALVMIGDAVWKTPSQAITASSKLPSSKRSALTSSSLSLAPAKFQRCATFF*LPG 129
Query: 116 SLTVPRTWYPDSRSRLTSQEAMKPDAPVTQTLPLAVLA 3
SLTVPRT YPDSRSRLTSQEA KP+APVT TLPL V A
Sbjct: 128 SLTVPRT*YPDSRSRLTSQEATKPEAPVTHTLPLEVFA 15
Score = 293 bits (635), Expect = 9e-079
Identities = 128/212 (60%), Positives = 148/212 (69%)
Frame = -3 / -1
Query: 642 EQAEDIRSGGAELRRQSRSDNEGRKNGDEVDPVLSGELPGCLLGEDLCDGVPYLETFAEL 463
+QA+DI GG + R+D+E RK+G EVD VL GELPG L EDL D VPYL+ FAEL
Sbjct: 654 KQAKDI*GGGG*HGGEVRADDERRKDGHEVDVVLLGELPG*FLSEDLGDSVPYLDAFAEL 475
Query: 462 DGAPRRFVQQHVRGQVGFVLDPHCRRRGCQDNPLERWVLLARA*HVHRAVYC*IKHLLLG 283
DGAP F+QQHV G+ F+ PH RRR +DNPLE+W+LLA + HV AVY IKH LG
Sbjct: 474 DGAP*CFIQQHVGGEFSFISQPHGRRRRREDNPLEKWILLAGSQHVQGAVYRRIKHFFLG 295
Query: 282 IRSGDDGRCGVEDALASHHSVVEAPFLQEISSHELQPFLCAFQAPEVPYFLAIPWVSDCS 103
I GDD RC VED LASHH +VEAPF QE+S HELQP L PEV Y L I WVSDC
Sbjct: 294 ISIGDDRRCSVEDTLASHHGIVEAPFFQEVSPHELQPLLGTS*VPEVCYLLLIAWVSDCP 115
Query: 102 QDMVPRLKKPLDEPGGDETRRPSDTDLTLSSV 7
+M+P LKKP D+P GDETR SDT L L S+
Sbjct: 114 *NMIPGLKKPFDKPRGDETRGSSDTHLALGSI 19
Score = 96.8 bits (205), Expect(4) = 3e-054
Identities = 50/106 (47%), Positives = 63/106 (59%)
Frame = +3 / +3
Query: 447 VVELHRVLRKSPDMVRRRKDPRREGSLGVRRRAQDRPRHRSSDLRCRTYSVS*ARPHRF* 626
++EL RVLRK PDMVR R+DPR E SLGVR+ Q RPR R SD+R R + PHR
Sbjct: 459 IMELRRVLRKHPDMVRCRQDPR*EISLGVRQGEQHRPRGRPSDVRRRP*PLPRVSPHRLK 638
Query: 627 CPRPVPRRDGEVHDVREDGVRPHRRRGEVPHAGVRGRGRPREVHLQ 764
CP V R + E+H E+ VR R E+PH ++ G +LQ
Sbjct: 639 CPWLV*RGNREIHPSPEEWVRSLGRTRELPHLVLQNPGPKGRDNLQ 776
Score = 92.7 bits (196), Expect(2) = 7e-032
Identities = 43/68 (63%), Positives = 51/68 (75%)
Frame = +2 / +2
Query: 107 QSETQGMARK*GTSGAWKAQRKGCSS*ELISWRKGASTTL*WLARASSTPHRPSSPDLIP 286
QSETQ + R+* TSG R+G SS* L SW+KGAST *WLAR SST HR SSP LIP
Sbjct: 119 QSETQAIRRR*HTSGT*LVPRRGWSS*GLTSWKKGASTMP*WLARVSSTLHRLSSPMLIP 298
Query: 287 RRRCLIQQ 310
R++CLI++
Sbjct: 299 RKKCLIRR 322
Score = 76.2 bits (160), Expect(4) = 3e-054
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +3 / +3
Query: 249 PHRIARRHRI*FQGGDA*FSNKRHDERATLVQEEPIAQEGCPDILVVDSE 398
PH IA H+ *FQG +A*F +KRH ERA ++QEE I+QEGCP ++VVD E
Sbjct: 261 PHCIAYHHQC*FQGRNA*FGDKRHPERAEILQEESISQEGCPHVVVVDRE 410
Score = 67.5 bits (141), Expect(4) = 3e-054
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +3 / +3
Query: 18 G*GLCHWGVWFHRLLARQAAS*VWVPCPGNSQRPREWQESRAPLGPGRRKGKAAA 182
G G+CHW +WF RLLA Q AS*V V C +SQRPR+ +E PL +G+A A
Sbjct: 30 GQGVCHWSLWFRRLLACQTAS*VRVSCSRDSQRPRQSEEGSTPLELSWCQGEAGA 194
Score = 65.2 bits (136), Expect(2) = 7e-032
Identities = 29/45 (64%), Positives = 29/45 (64%)
Frame = +2 / +2
Query: 359 SRGLS*HPRRRQ*GSRTKPTCPLTCCWTNRRGAPSSSAKVSRYGT 493
SRGLS RRR *G K P TCCW GAPSSSAK SRYGT
Sbjct: 371 SRGLSSRRRRRP*G*EMKLNSPPTCCWMKHHGAPSSSAKASRYGT 505
Score = 29.0 bits (57), Expect(4) = 3e-054
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1 / +2
Query: 787 DLAALLARRFPAYPVPRSLPRAYG 858
+L+ + FP +P P+SLP+ +G
Sbjct: 800 NLSPCFQKGFPLFPSPKSLPKIFG 871
>gb|BE060930.3|BE060930 HVSMEg0013N24f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0013N24f, mRNA sequence
Length = 896
Score = 362 bits (785), Expect = 2e-099
Identities = 149/196 (76%), Positives = 166/196 (84%)
Frame = +1 / +3
Query: 4 ANTAKGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQL 183
ANT+KGKVCVTGASGF+ASWLVKRLLESGYHVLGTVRDPGN KKV HLW L GAKERL+L
Sbjct: 15 ANTSKGKVCVTGASGFVASWLVKRLLESGYHVLGTVRDPGNQKKVAHLWNLAGAKERLEL 194
Query: 184 VRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSKEEMLDSAINGTMNVLRSCKKNPXXX 363
VRADLLEEGSFDDAVMACEGVFHTASP++T ++SKEEMLDSAINGT+NVLRSCKKNP
Sbjct: 195 VRADLLEEGSFDDAVMACEGVFHTASPIITNADSKEEMLDSAINGTLNVLRSCKKNPFLK 374
Query: 364 XXXXXXXXXXXXIKDEADLPPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGE 543
++DEA+ PPNVLLDE+SWSS+EFCES+QI YA AKILAEK+ WEFA E
Sbjct: 375 RVVLTSSSSTVRLRDEAEFPPNVLLDETSWSSVEFCESIQILYACAKILAEKSTWEFAKE 554
Query: 544 HRIDLVTVLPTFVVGP 591
+ I+LV TFVVGP
Sbjct: 555 NNINLVGGPSTFVVGP 602
Score = 293 bits (635), Expect = 9e-079
Identities = 138/196 (70%), Positives = 146/196 (74%)
Frame = -1 / -2
Query: 590 GPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHIWRLSQNSMELHDDXXXXXXXXXXX 411
GPTT V TR +L S ANSQ FSARI A AY+IW LSQNS ELHD
Sbjct: 601 GPTTNVEGPPTRLMLFSLANSQVDFSARILAQAYNIWMLSQNSTELHDVSSSSTLGGNSA 422
Query: 410 XXLILTVDDEDVRTTLLSDGFFLHERSTFIVPFIAESSISSLELDPVTTGDAVWKTPSQA 231
L LTVDD+DVRTTLL +GFFL + STF VPFIAESSISSLE V GDAVWKTPSQA
Sbjct: 421 SSLSLTVDDDDVRTTLLRNGFFLQDLSTFRVPFIAESSISSLESALVMIGDAVWKTPSQA 242
Query: 230 ITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPGSLTVPRTWYPDSRSRLTSQEAM 51
ITASSKLPSSKRSALTS SLS AP++ QRC TF PGSLTVPRT YPDSRSRLTSQEA
Sbjct: 241 ITASSKLPSSKRSALTSSSLSLAPAKFQRCATFF*LPGSLTVPRT*YPDSRSRLTSQEAT 62
Query: 50 KPDAPVTQTLPLAVLA 3
KP+APVT TLPL V A
Sbjct: 61 KPEAPVTHTLPLEVFA 14
Score = 269 bits (581), Expect = 3e-071
Identities = 118/207 (57%), Positives = 137/207 (66%)
Frame = -3 / -1
Query: 627 IRSGGAELRRQSRSDNEGRKNGDEVDPVLSGELPGCLLGEDLCDGVPYLETFAELDGAPR 448
+R G + R+D+E + EVD V GELPG L EDL V YL+ FAELDGAP
Sbjct: 638 LRWWGHNRGERLRADDERGRTAHEVDVVFFGELPG*FLSEDLGASVQYLDAFAELDGAP* 459
Query: 447 RFVQQHVRGQVGFVLDPHCRRRGCQDNPLERWVLLARA*HVHRAVYC*IKHLLLGIRSGD 268
F+QQHV G+ F+ PH RRR +DNPLE+W+LLA + HV AVY IKH LGI GD
Sbjct: 458 CFIQQHVGGEFSFISQPHGRRRRREDNPLEKWILLAGSQHVQGAVYRRIKHFFLGISIGD 279
Query: 267 DGRCGVEDALASHHSVVEAPFLQEISSHELQPFLCAFQAPEVPYFLAIPWVSDCSQDMVP 88
D RC VED LASHH +VEAPF QE+S HELQP L PEV Y L I WVSDC +M+P
Sbjct: 278 DRRCSVEDTLASHHGIVEAPFFQEVSPHELQPLLGTS*VPEVCYLLLIAWVSDCP*NMIP 99
Query: 87 RLKKPLDEPGGDETRRPSDTDLTLSSV 7
LKKP D+P GDETR SDT L L S+
Sbjct: 98 GLKKPFDKPRGDETRGSSDTHLALGSI 18
Score = 92.7 bits (196), Expect(2) = 1e-030
Identities = 43/68 (63%), Positives = 51/68 (75%)
Frame = +2 / +1
Query: 107 QSETQGMARK*GTSGAWKAQRKGCSS*ELISWRKGASTTL*WLARASSTPHRPSSPDLIP 286
QSETQ + R+* TSG R+G SS* L SW+KGAST *WLAR SST HR SSP LIP
Sbjct: 118 QSETQAIRRR*HTSGT*LVPRRGWSS*GLTSWKKGASTMP*WLARVSSTLHRLSSPMLIP 297
Query: 287 RRRCLIQQ 310
R++CLI++
Sbjct: 298 RKKCLIRR 321
Score = 76.2 bits (160), Expect(3) = 5e-041
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +3 / +2
Query: 249 PHRIARRHRI*FQGGDA*FSNKRHDERATLVQEEPIAQEGCPDILVVDSE 398
PH IA H+ *FQG +A*F +KRH ERA ++QEE I+QEGCP ++VVD E
Sbjct: 260 PHCIAYHHQC*FQGRNA*FGDKRHPERAEILQEESISQEGCPHVVVVDRE 409
Score = 67.5 bits (141), Expect(3) = 5e-041
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +3 / +2
Query: 18 G*GLCHWGVWFHRLLARQAAS*VWVPCPGNSQRPREWQESRAPLGPGRRKGKAAA 182
G G+CHW +WF RLLA Q AS*V V C +SQRPR+ +E PL +G+A A
Sbjct: 29 GQGVCHWSLWFRRLLACQTAS*VRVSCSRDSQRPRQSEEGSTPLELSWCQGEAGA 193
Score = 62.9 bits (131), Expect(3) = 5e-041
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = +3 / +2
Query: 447 VVELHRVLRKSPDMVRRRKDPRREGSLGVRRRAQDRPRHRSSDLRCR 587
++EL RVLRK PD+VR R+DPR E +LGVR+R Q +PR RS +R R
Sbjct: 458 IMELRRVLRKHPDIVRLRQDPR*EINLGVRQRKQHQPRGRSFHVRRR 598
Score = 61.1 bits (127), Expect(2) = 1e-030
Identities = 28/45 (62%), Positives = 28/45 (62%)
Frame = +2 / +1
Query: 359 SRGLS*HPRRRQ*GSRTKPTCPLTCCWTNRRGAPSSSAKVSRYGT 493
SRGLS RRR *G K P TCCW GAPSSSAK SRY T
Sbjct: 370 SRGLSSRRRRRP*G*EMKLNSPPTCCWMKHHGAPSSSAKASRYCT 504
>gb|BE455566.2|BE455566 HVSMEg0017N13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017N13f, mRNA sequence
Length = 584
Score = 342 bits (741), Expect = 2e-093
Identities = 135/192 (70%), Positives = 159/192 (82%)
Frame = +1 / +2
Query: 310 INGTMNVLRSCKKNPXXXXXXXXXXXXXXXIKDEADLPPNVLLDESSWSSIEFCESLQIW 489
INGT+NVLRSCKKNP ++DEA+ PPNVLLDE+SWSS+EFCES+QIW
Sbjct: 2 INGTLNVLRSCKKNPFLKRVVLTSSSSTVRLRDEAEFPPNVLLDETSWSSVEFCESIQIW 181
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQGETGKFTT 669
YAVAKILAEK+AWEFA E+ IDLV VLPTFVVGP LSP LGPTASDVLGLF+GET KFT
Sbjct: 182 YAVAKILAEKSAWEFAKENNIDLVAVLPTFVVGPNLSPVLGPTASDVLGLFKGETEKFTI 361
Query: 670 YGRMGYVHIDDVARCHMLAYEAAGARGRYICSAAVLDCGDLAALLARRFPAYPVPRSLPR 849
+GRMGYVHIDDVA CH+L YE A A+GRYIC++AVL +L ALLA+RFP++P+P+SLP
Sbjct: 362 FGRMGYVHIDDVASCHILVYETADAKGRYICNSAVLGSDELVALLAKRFPSFPIPKSLPN 541
Query: 850 AYGEQSYGFDTS 885
YGEQ+YG++TS
Sbjct: 542 IYGEQTYGYNTS 577
Score = 265 bits (574), Expect = 2e-070
Identities = 119/192 (61%), Positives = 130/192 (67%)
Frame = -1 / -3
Query: 884 DVSKPYDCSP*ARGRLLGTGYAGNXXXXXXXXXXXXXXXALQMYLPRAPAASYASMWHLA 705
DV PY CSP* G+L G G GN LQMYLP A A S MW LA
Sbjct: 576 DVL*PYVCSP*MLGKLFGMGNDGNRFASKATSSSLPRTAELQMYLPLASAVS*TRMWQLA 397
Query: 704 TSSMWTYPILPYVVNFPVSPWNRPRTSEAVGPSSGDRVGPTTKVGRTVTRSILCSPANSQ 525
TSSMWTYPILP +VNF VSP N+PRTSEAVGP++G+R+GPTT VGRT TRS+L S ANSQ
Sbjct: 396 TSSMWTYPILPKMVNFSVSPLNKPRTSEAVGPNTGERLGPTTNVGRTATRSMLFSLANSQ 217
Query: 524 AAFSARIFATAYHIWRLSQNSMELHDDXXXXXXXXXXXXXLILTVDDEDVRTTLLSDGFF 345
A FSARI ATAYHIW LSQNS ELHD L LTVDD+DVRTTLL +GFF
Sbjct: 216 ADFSARILATAYHIWMLSQNSTELHDVSSSSTLGGNSASSLSLTVDDDDVRTTLLRNGFF 37
Query: 344 LHERSTFIVPFI 309
L + STF VPFI
Sbjct: 36 LQDLSTFRVPFI 1
Score = 156 bits (335), Expect(2) = 1e-052
Identities = 70/118 (59%), Positives = 84/118 (71%)
Frame = -3 / -2
Query: 663 ELPRLSLEQAEDIRSGGAELRRQSRSDNEGRKNGDEVDPVLSGELPGCLLGEDLCDGVPY 484
EL RL +QA+DI GGA + R+D+E RK+G EVD VL GELPG L EDL D VPY
Sbjct: 355 ELLRLPFKQAKDI*GGGA*HGGEVRADDERRKDGHEVDVVLLGELPG*FLSEDLGDSVPY 176
Query: 483 LETFAELDGAPRRFVQQHVRGQVGFVLDPHCRRRGCQDNPLERWVLLARA*HVHRAVY 310
L+ FAELDGAP F+QQHV G+ F+ PH RRR +DNPLE+W+LLA + HV AVY
Sbjct: 175 LDAFAELDGAP*CFIQQHVGGEFSFISQPHGRRRRREDNPLEKWILLAGSQHVQGAVY 2
Score = 151 bits (325), Expect(2) = 2e-045
Identities = 68/106 (64%), Positives = 77/106 (72%)
Frame = +3 / +1
Query: 447 VVELHRVLRKSPDMVRRRKDPRREGSLGVRRRAQDRPRHRSSDLRCRTYSVS*ARPHRF* 626
++EL RVLRK PDMVR R+DPR E SLGVR+ Q RPR R SD+R R + RPHR
Sbjct: 139 IMELRRVLRKHPDMVRCRQDPR*EISLGVRQGEQHRPRGRPSDVRRRP*PLPRVRPHRLR 318
Query: 627 CPRPVPRRDGEVHDVREDGVRPHRRRGEVPHAGVRGRGRPREVHLQ 764
CP V R DGEVH +REDGVRPHRRR E+PH G+R RGR EVHLQ
Sbjct: 319 CPWLV*RGDGEVHHLREDGVRPHRRRRELPHPGLRNRGRQGEVHLQ 456
Score = 89.5 bits (189), Expect(2) = 3e-030
Identities = 35/59 (59%), Positives = 41/59 (69%)
Frame = +2 / +3
Query: 713 ATCWRTRPRAPEGGTSAARRCWTAATSPPCSRGGSQRTPSRGACPAPTASSRTASTRPR 889
AT W T+PR P GGTSA RR W A + PCSR GS+R+PS+ CP T S RTA+TR R
Sbjct: 405 ATSWSTKPRTPRGGTSATRRFWVATSWSPCSRNGSRRSPSQRVCPTFTGSRRTATTRXR 581
Score = 71.2 bits (149), Expect(2) = 1e-052
Identities = 33/54 (61%), Positives = 36/54 (66%)
Frame = -3 / -2
Query: 882 RVEAVRLLAVGAGQAPRDGVRWEPPREQGGEVAAVQHRRAADVPPSGARGLVRQ 721
RV AVRLL V GQ DG R EP REQG ++ A Q+RR ADVPP G RG V Q
Sbjct: 574 RVVAVRLLPVNVGQTLWDGERREPFREQGDQLVATQNRRVADVPPLGVRGFVDQ 413
Score = 65.2 bits (136), Expect(2) = 3e-030
Identities = 29/45 (64%), Positives = 29/45 (64%)
Frame = +2 / +3
Query: 359 SRGLS*HPRRRQ*GSRTKPTCPLTCCWTNRRGAPSSSAKVSRYGT 493
SRGLS RRR *G K P TCCW GAPSSSAK SRYGT
Sbjct: 51 SRGLSSRRRRRP*G*EMKLNSPPTCCWMKHHGAPSSSAKASRYGT 185
Score = 51.5 bits (106), Expect(2) = 2e-045
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +3 / +1
Query: 309 NKRHDERATLVQEEPIAQEGCPDILVVDSE 398
+KRH ERA ++QEE I+QEGCP ++VVD E
Sbjct: 1 DKRHPERAEILQEESISQEGCPHVVVVDRE 90
>gb|BM816674.1|BM816674 HB01C06_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01C06_T3.ab1 similar to Aldehyde reductase,Hydrogen
dehydrogenase,Alcohol dehydrogenase,Cinnamyl-alcohol
dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,Cinnamoyl-CoA reductase,Transferred entry:
1.18.99.1,Carbonyl reductase (NADPH),Dihydrokaempferol
4-reductase,, mRNA sequence
Length = 847
Score = 125 bits (267), Expect(4) = 1e-058
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +1
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 85 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 264
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 265 EGTFDAAIAGCDCVFHTASP 324
Score = 99.6 bits (211), Expect(2) = 2e-023
Identities = 48/80 (60%), Positives = 53/80 (66%)
Frame = -1 / -3
Query: 263 GDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPGSLTVPRTWYPD 84
G+AVWKT SQ A+SK+PSS + AL CSLS APSR RC FL S TV RT P
Sbjct: 323 GEAVWKTQSQPAMAASKVPSSNKLALNKCSLSLAPSRACRCNVFLGSAVSRTVARTV*PR 144
Query: 83 SRSRLTSQEAMKPDAPVTQT 24
R LTSQEAM P+APVT T
Sbjct: 143 WRRSLTSQEAM*PEAPVTHT 84
Score = 86.8 bits (183), Expect(4) = 1e-058
Identities = 32/83 (38%), Positives = 54/83 (65%)
Frame = +1 / +1
Query: 424 PNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSP 603
P+V++DE+ +SS E CE + WY ++K LAE+AAW+FA ++ + ++T+ PT V+GP L P
Sbjct: 481 PDVVVDETWFSSAEVCEKNKQWYVLSKTLAEEAAWKFAKDNGLXIITINPTMVIGPLLQP 660
Query: 604 ELGPTASDVLGLFQGETGKFTTY 672
L +A +L G + + +
Sbjct: 661 TLNTSAEAILKXINGSSSTYAHF 729
Score = 43.2 bits (88), Expect(4) = 1e-058
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +1
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 349 KAELLDPAVNGTLNVLRSCKK 411
Score = 33.1 bits (66), Expect(2) = 2e-023
Identities = 21/49 (42%), Positives = 23/49 (46%)
Frame = -1 / -3
Query: 608 SSGDRVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHIWRLSQNS 462
S G GP T VG V S AN AA SAR+ + YH SQ S
Sbjct: 665 SVGCNRGPMTIVGFIVIIXNPLSFANFHAASSARVLDSTYHCLFFSQTS 519
Score = 29.0 bits (57), Expect(4) = 1e-058
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 682 GYVHIDDVARCHMLAYEAAGA 744
G+V++ DVA H+LAYE A
Sbjct: 736 GWVNVKDVALAHILAYEDPSA 798
>gb|BU986537.1|BU986537 HF12C17r HF Hordeum vulgare subsp. vulgare cDNA clone HF12C17
5-PRIME, mRNA sequence
Length = 683
Score = 125 bits (267), Expect(3) = 2e-055
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +3
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 78 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 257
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 258 EGTFDAAIAGCDCVFHTASP 317
Score = 99.6 bits (211), Expect(2) = 7e-024
Identities = 48/80 (60%), Positives = 53/80 (66%)
Frame = -1 / -2
Query: 263 GDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPGSLTVPRTWYPD 84
G+AVWKT SQ A+SK+PSS + AL CSLS APSR RC FL S TV RT P
Sbjct: 316 GEAVWKTQSQPAMAASKVPSSNKLALNKCSLSLAPSRACRCNVFLGSAVSRTVARTV*PR 137
Query: 83 SRSRLTSQEAMKPDAPVTQT 24
R LTSQEAM P+APVT T
Sbjct: 136 WRRSLTSQEAM*PEAPVTHT 77
Score = 86.8 bits (183), Expect(3) = 2e-055
Identities = 32/70 (45%), Positives = 51/70 (72%)
Frame = +1 / +3
Query: 424 PNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSP 603
P+V++DE+ +SS E CE Q WY ++K LAE+AAW+FA ++ ++++T+ PT V+GP L P
Sbjct: 474 PDVVVDETWFSSAEVCEKNQQWYVLSKTLAEEAAWKFAKDNGLEIITINPTMVIGPLLQP 653
Query: 604 ELGPTASDVL 633
L +A +L
Sbjct: 654 TLNTSAEAIL 683
Score = 43.2 bits (88), Expect(3) = 2e-055
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +3
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 342 KAELLDPAVNGTLNVLRSCKK 404
Score = 34.1 bits (68), Expect(2) = 7e-024
Identities = 22/49 (44%), Positives = 24/49 (48%)
Frame = -1 / -2
Query: 608 SSGDRVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHIWRLSQNS 462
S G GP T VG V S S AN AA SAR+ + YH SQ S
Sbjct: 658 SVGCNRGPMTIVGFIVIISNPLSFANFHAASSARVLDSTYHC*FFSQTS 512
>gb|BQ470739.1|BQ470739 HX03O06r HX Hordeum vulgare subsp. vulgare cDNA clone HX03O06
5-PRIME, mRNA sequence
Length = 667
Score = 125 bits (267), Expect(3) = 2e-055
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +2
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 62 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 241
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 242 EGTFDAAIAGCDCVFHTASP 301
Score = 99.6 bits (211), Expect(2) = 7e-024
Identities = 48/80 (60%), Positives = 53/80 (66%)
Frame = -1 / -2
Query: 263 GDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPGSLTVPRTWYPD 84
G+AVWKT SQ A+SK+PSS + AL CSLS APSR RC FL S TV RT P
Sbjct: 300 GEAVWKTQSQPAMAASKVPSSNKLALNKCSLSLAPSRACRCNVFLGSAVSRTVARTV*PR 121
Query: 83 SRSRLTSQEAMKPDAPVTQT 24
R LTSQEAM P+APVT T
Sbjct: 120 WRRSLTSQEAM*PEAPVTHT 61
Score = 86.8 bits (183), Expect(3) = 2e-055
Identities = 32/70 (45%), Positives = 51/70 (72%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSP 603
P+V++DE+ +SS E CE Q WY ++K LAE+AAW+FA ++ ++++T+ PT V+GP L P
Sbjct: 458 PDVVVDETWFSSAEVCEKNQQWYVLSKTLAEEAAWKFAKDNGLEIITINPTMVIGPLLQP 637
Query: 604 ELGPTASDVL 633
L +A +L
Sbjct: 638 TLNTSAEAIL 667
Score = 43.2 bits (88), Expect(3) = 2e-055
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +2
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 326 KAELLDPAVNGTLNVLRSCKK 388
Score = 34.1 bits (68), Expect(2) = 7e-024
Identities = 22/49 (44%), Positives = 24/49 (48%)
Frame = -1 / -2
Query: 608 SSGDRVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHIWRLSQNS 462
S G GP T VG V S S AN AA SAR+ + YH SQ S
Sbjct: 642 SVGCNRGPMTIVGFIVIISNPLSFANFHAASSARVLDSTYHC*FFSQTS 496
>gb|BF255832.2|BF255832 HVSMEf0007P02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0007P02f, mRNA sequence
Length = 837
Score = 125 bits (267), Expect(3) = 4e-055
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +2
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 107 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 286
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 287 EGTFDAAIAGCDCVFHTASP 346
Score = 99.6 bits (211), Expect(2) = 2e-024
Identities = 48/80 (60%), Positives = 53/80 (66%)
Frame = -1 / -1
Query: 263 GDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPGSLTVPRTWYPD 84
G+AVWKT SQ A+SK+PSS + AL CSLS APSR RC FL S TV RT P
Sbjct: 345 GEAVWKTQSQPAMAASKVPSSNKLALNKCSLSLAPSRACRCNVFLGSAVSRTVARTV*PR 166
Query: 83 SRSRLTSQEAMKPDAPVTQT 24
R LTSQEAM P+APVT T
Sbjct: 165 WRRSLTSQEAM*PEAPVTHT 106
Score = 85.8 bits (181), Expect(3) = 4e-055
Identities = 34/87 (39%), Positives = 53/87 (60%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSP 603
P+V++DE+ +SS E CE + WY ++K LAE+AAW+FA ++ +++T+ PT V+GP L P
Sbjct: 503 PDVVVDETWFSSAEVCEKNKQWYVLSKTLAEEAAWKFAKDNGFEIITINPTMVIGPLLQP 682
Query: 604 ELGPTASDVLGLFQGETGKFTTYGRMG 684
L A +L G + MG
Sbjct: 683 TLNSCAEAILKFINGSSSTSPISAWMG 763
Score = 43.2 bits (88), Expect(3) = 4e-055
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +2
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 371 KAELLDPAVNGTLNVLRSCKK 433
Score = 35.9 bits (72), Expect(2) = 2e-024
Identities = 22/49 (44%), Positives = 24/49 (48%)
Frame = -1 / -1
Query: 608 SSGDRVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHIWRLSQNS 462
S G GP T VG V S S AN AA SAR+ + YH SQ S
Sbjct: 687 SVGCNRGPMTMVGFIVIISNPLSFANFHAASSARVLDSTYHCLFFSQTS 541
>gb|AW982651.2|AW982651 HVSMEg0003N13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003N13f, mRNA sequence
Length = 1042
Score = 125 bits (267), Expect(3) = 3e-052
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +1
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 31 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 210
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 211 EGTFDAAIAGCDCVFHTASP 270
Score = 99.6 bits (211), Expect(2) = 3e-023
Identities = 48/80 (60%), Positives = 53/80 (66%)
Frame = -1 / -3
Query: 263 GDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPGSLTVPRTWYPD 84
G+AVWKT SQ A+SK+PSS + AL CSLS APSR RC FL S TV RT P
Sbjct: 269 GEAVWKTQSQPAMAASKVPSSNKLALNKCSLSLAPSRACRCNVFLGSAVSRTVARTV*PR 90
Query: 83 SRSRLTSQEAMKPDAPVTQT 24
R LTSQEAM P+APVT T
Sbjct: 89 WRRSLTSQEAM*PEAPVTHT 30
Score = 78.0 bits (164), Expect(3) = 3e-052
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = +1 / +1
Query: 424 PNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSP 603
P+V++DE+ +SS E CE + WY ++K LAE+AAW+FA ++ I+ T+ T +GP L P
Sbjct: 427 PDVVVDETWFSSAEVCEKNKQWYVLSKTLAEEAAWKFAKDNGIENNTINSTMGIGPLLQP 606
Query: 604 ELGPTASDVLGLFQGETGKFTTY 672
L A +L G + + +
Sbjct: 607 TLNTNAEAILEFINGSSSTYANF 675
Score = 41.4 bits (84), Expect(3) = 3e-052
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1 / +1
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD +NGT+NVLRSCKK
Sbjct: 295 KAELLDPTVNGTLNVLRSCKK 357
Score = 32.7 bits (65), Expect(2) = 3e-023
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = -1 / -3
Query: 647 PWNRPRTSEAVGPSSGDRVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHIWRLSQ 468
P+ + A+ S G GP V V SI S AN AA SAR+ + YH SQ
Sbjct: 650 PFINSNIASALVFSVGCNRGPMPIVEFIVLFSIPLSFANFHAASSARVLDSTYHCLFFSQ 471
Query: 467 NS 462
S
Sbjct: 470 TS 465
>gb|AL505150.1|AL505150 AL505150 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I24V 5', mRNA sequence
Length = 700
Score = 123 bits (263), Expect(3) = 5e-046
Identities = 53/80 (66%), Positives = 59/80 (73%)
Frame = +1 / +1
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+I SWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 103 VCVTGASGYIXSWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 282
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 283 EGTFDAAIAGCDCVFHTASP 342
Score = 97.7 bits (207), Expect(2) = 5e-021
Identities = 47/80 (58%), Positives = 52/80 (65%)
Frame = -1 / -3
Query: 263 GDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPGSLTVPRTWYPD 84
G+AVWKT SQ A+SK+PSS + AL CSLS APSR RC FL S TV RT P
Sbjct: 341 GEAVWKTQSQPAMAASKVPSSNKLALNKCSLSLAPSRACRCNVFLGSAVSRTVARTV*PR 162
Query: 83 SRSRLTSQEAMKPDAPVTQT 24
R LTSQE M P+APVT T
Sbjct: 161 WRRSLTSQEXM*PEAPVTHT 102
Score = 57.0 bits (118), Expect(3) = 5e-046
Identities = 21/41 (51%), Positives = 32/41 (78%)
Frame = +1 / +1
Query: 424 PNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEH 546
P+V++DE+ +SS E CE Q WY ++K LAE+AAW+FA ++
Sbjct: 499 PDVVVDETWFSSAEVCEKNQQWYVLSKTLAEEAAWKFAXDN 621
Score = 43.2 bits (88), Expect(3) = 5e-046
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +1
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 367 KAELLDPAVNGTLNVLRSCKK 429
Score = 26.3 bits (51), Expect(2) = 5e-021
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1 / -3
Query: 542 SPANSQAAFSARIFATAYHIWRLSQNS 462
S AN AA SAR+ + YH SQ S
Sbjct: 617 SXANFHAASSARVLDSTYHC*FFSQTS 537
>gb|BG343487.1|BG343487 HVSMEg0005O08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005O08f, mRNA sequence
Length = 949
Score = 125 bits (267), Expect(2) = 8e-046
Identities = 54/96 (56%), Positives = 67/96 (69%)
Frame = +1 / +3
Query: 28 CVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLEE 207
CVTG +GFIAS L++ LL +G+ V TVRDP + KVG LW LEGA ERLQL+RADLL E
Sbjct: 24 CVTGGTGFIASHLIRALLAAGHTVRATVRDPSDEAKVGFLWELEGADERLQLLRADLLVE 203
Query: 208 GSFDDAVMACEGVFHTASPVVTGSNSKEEMLDSAIN 315
GSFD AV +GVFH ASPVV ++ + ++
Sbjct: 204 GSFDAAVSGVDGVFHAASPVVVSYEDGKDAQEKLVD 311
Score = 91.3 bits (193), Expect(2) = 1e-024
Identities = 44/81 (54%), Positives = 50/81 (61%)
Frame = -1 / -1
Query: 269 TTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPGSLTVPRTWY 90
TTGDA WKTPS +TA+SK PS+ RSA +SCS S APS R PT GS TV RT
Sbjct: 265 TTGDAAWKTPSTPLTAASKEPSTSRSARSSCSRSSAPSSSHRNPTLASSLGSRTVARTVC 86
Query: 89 PDSRSRLTSQEAMKPDAPVTQ 27
P + S +AM P PVTQ
Sbjct: 85 PAANSARIRCDAMNPVPPVTQ 23
Score = 82.6 bits (174), Expect(2) = 8e-046
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1 / +3
Query: 436 LDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSP 603
L+ES WS ++C + +WYA AK +AEK AW A EH +DLV V P+FV+GP L P
Sbjct: 441 LNESHWSDADYCRTYGLWYAYAKTVAEKEAWRLATEHGLDLVVVNPSFVIGPVLGP 608
Score = 45.5 bits (93), Expect(2) = 1e-024
Identities = 25/62 (40%), Positives = 32/62 (51%)
Frame = -1 / -1
Query: 629 TSEAVGPSSGDRVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHIWRLSQNSMELH 450
TS + ++G GP T G T TRS CS A+ A+FSA + A AY + Q S L
Sbjct: 634 TSPVLVGAAGPSTGPITNDGFTTTRSSPCSVASRHASFSATVLAYAYQSPYVRQ*SASLQ 455
Query: 449 DD 444
D
Sbjct: 454 CD 449
>gb|AV934049.1|AV934049 AV934049 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baaln14 5', mRNA sequence
Length = 611
Score = 120 bits (257), Expect(3) = 9e-043
Identities = 52/81 (64%), Positives = 60/81 (74%)
Frame = +1 / +2
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASW+VK LL+ GY V GTVRD + K HL L+GA +RL L A+LLE
Sbjct: 86 VCVTGASGYIASWIVKLLLDRGYTVHGTVRDTADPNKTLHLRALDGANDRLHLFNANLLE 265
Query: 205 EGSFDDAVMACEGVFHTASPV 267
EGSFD A+ CE VFH ASPV
Sbjct: 266 EGSFDAAIDGCECVFHAASPV 328
Score = 110 bits (235), Expect(2) = 2e-024
Identities = 56/120 (46%), Positives = 69/120 (57%)
Frame = -1 / -3
Query: 383 EDVRTTLLSDGFFLHERSTFIVPFIAESSISSLELDPVTTGDAVWKTPSQAITASSKLPS 204
+DV TTLL++ F ++ + S+ + L TG+A W T SQ A+SK PS
Sbjct: 444 DDVMTTLLTEAFLQERKTLSVPLTAESSNSALGSLAAKKTGEAAWNTHSQPSMAASKEPS 265
Query: 203 SKRSALTSCSLSFAPSRPQRCPTFLPFPGSLTVPRTWYPDSRSRLTSQEAMKPDAPVTQT 24
S + AL CSLSFAPSR +RC S TVP T P SR LT Q+AM PDAPVTQT
Sbjct: 264 SNKFALNRCSLSFAPSRARRCNVLFGSAVSRTVPWTV*PRSRRSLTIQDAMYPDAPVTQT 85
Score = 48.7 bits (100), Expect(3) = 9e-043
Identities = 18/36 (50%), Positives = 27/36 (75%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWE 531
P+V++DE+ +S E C+ Q WY ++K LAE+AAWE
Sbjct: 482 PDVIVDETWFSLPELCKKNQQWYTLSKTLAEEAAWE 589
Score = 43.2 bits (88), Expect(3) = 9e-043
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LDSA++GT+NVLRSCKK
Sbjct: 350 KAELLDSAVSGTLNVLRSCKK 412
Score = 22.6 bits (43), Expect(2) = 2e-024
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -3
Query: 530 SQAAFSARIFATAYH 486
SQAA SAR+ YH
Sbjct: 588 SQAASSARVLDKVYH 544
>gb|BG418662.2|BG418662 HVSMEk0023M18f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0023M18f, mRNA sequence
Length = 816
Score = 119 bits (255), Expect(3) = 5e-040
Identities = 51/92 (55%), Positives = 64/92 (69%)
Frame = +1 / +3
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KG V VTGASGF+ SWLV +LL++GY V TVRDP N +K L L GAKERL + +AD
Sbjct: 54 KGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKAD 233
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKE 291
L E+GSF++A+ C GVFH A+P+ S E
Sbjct: 234 LSEDGSFNEAIAGCTGVFHVATPMDFDSQDPE 329
Score = 63.8 bits (133), Expect(3) = 5e-040
Identities = 29/90 (32%), Positives = 48/90 (53%)
Frame = +1 / +3
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQGETGKFTT 669
Y V+K LAEKAA E+A E+ +D ++++ T VVGP LS + P+ L L G ++
Sbjct: 528 YFVSKALAEKAAMEYASENGLDFISIIXTLVVGPFLSAGMPPSLVTALALITGNEDHYSI 707
Query: 670 YGRMGYVHIDDVARCHMLAYEAAGARGRYI 759
++ VH+ D+ + + A Y+
Sbjct: 708 LKQVQLVHLYDLCDA*LFSLTPADDAATYV 797
Score = 24.4 bits (47), Expect(3) = 5e-040
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 424 PNVLLDESSWSSIEFCESLQI 486
P D+ +WS I++C +++
Sbjct: 453 PRPAYDQDNWSDIDYCRRVKM 515
>gb|BQ460124.1|BQ460124 HA07C19r HA Hordeum vulgare subsp. vulgare cDNA clone HA07C19
5-PRIME, mRNA sequence
Length = 579
Score = 125 bits (267), Expect(3) = 2e-039
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +2
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 110 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 289
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 290 EGTFDAAIAGCDCVFHTASP 349
Score = 43.2 bits (88), Expect(3) = 2e-039
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +2
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 374 KAELLDPAVNGTLNVLRSCKK 436
Score = 33.1 bits (66), Expect(3) = 2e-039
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFCESLQIWY 492
P+V++DE+ +SS E CE Q WY
Sbjct: 506 PDVVVDETWFSSAEVCEKNQQWY 574
>gb|BU986380.1|BU986380 HF11K09r HF Hordeum vulgare subsp. vulgare cDNA clone HF11K09
5-PRIME, mRNA sequence
Length = 571
Score = 125 bits (267), Expect(3) = 2e-039
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +2
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 104 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 283
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 284 EGTFDAAIAGCDCVFHTASP 343
Score = 43.2 bits (88), Expect(3) = 2e-039
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +2
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 368 KAELLDPAVNGTLNVLRSCKK 430
Score = 33.1 bits (66), Expect(3) = 2e-039
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFCESLQIWY 492
P+V++DE+ +SS E CE Q WY
Sbjct: 500 PDVVVDETWFSSAEVCEKNQQWY 568
>gb|BQ467571.1|BQ467571 HS04D07r HS Hordeum vulgare subsp. vulgare cDNA clone HS04D07
5-PRIME, mRNA sequence
Length = 563
Score = 125 bits (267), Expect(3) = 2e-039
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +1
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 94 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 273
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 274 EGTFDAAIAGCDCVFHTASP 333
Score = 43.2 bits (88), Expect(3) = 2e-039
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +1
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 358 KAELLDPAVNGTLNVLRSCKK 420
Score = 33.1 bits (66), Expect(3) = 2e-039
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1 / +1
Query: 424 PNVLLDESSWSSIEFCESLQIWY 492
P+V++DE+ +SS E CE Q WY
Sbjct: 490 PDVVVDETWFSSAEVCEKNQQWY 558
>gb|AV934152.1|AV934152 AV934152 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11d04 5', mRNA sequence
Length = 590
Score = 120 bits (257), Expect(3) = 2e-039
Identities = 52/81 (64%), Positives = 60/81 (74%)
Frame = +1 / +2
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASW+VK LL+ GY V GTVRD + K HL L+GA +RL L A+LLE
Sbjct: 101 VCVTGASGYIASWIVKLLLDRGYTVHGTVRDTADPNKTLHLRALDGANDRLHLFNANLLE 280
Query: 205 EGSFDDAVMACEGVFHTASPV 267
EGSFD A+ CE VFH ASPV
Sbjct: 281 EGSFDAAIDGCECVFHAASPV 343
Score = 110 bits (235), Expect = 1e-023
Identities = 56/120 (46%), Positives = 69/120 (57%)
Frame = -1 / -3
Query: 383 EDVRTTLLSDGFFLHERSTFIVPFIAESSISSLELDPVTTGDAVWKTPSQAITASSKLPS 204
+DV TTLL++ F ++ + S+ + L TG+A W T SQ A+SK PS
Sbjct: 459 DDVMTTLLTEAFLQERKTLSVPLTAESSNSALGSLAAKKTGEAAWNTHSQPSMAASKEPS 280
Query: 203 SKRSALTSCSLSFAPSRPQRCPTFLPFPGSLTVPRTWYPDSRSRLTSQEAMKPDAPVTQT 24
S + AL CSLSFAPSR +RC S TVP T P SR LT Q+AM PDAPVTQT
Sbjct: 279 SNKFALNRCSLSFAPSRARRCNVLFGSAVSRTVPWTV*PRSRRSLTIQDAMYPDAPVTQT 100
Score = 43.2 bits (88), Expect(3) = 2e-039
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LDSA++GT+NVLRSCKK
Sbjct: 365 KAELLDSAVSGTLNVLRSCKK 427
Score = 37.3 bits (75), Expect(3) = 2e-039
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFCESLQIWYAVAKILAE 516
P+V++DE+ +S E C+ Q WY ++K LAE
Sbjct: 497 PDVIVDETWFSLPELCKKNQQWYTLSKTLAE 589
>gb|AV913567.1|AV913567 AV913567 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22i12 5', mRNA sequence
Length = 585
Score = 125 bits (267), Expect(3) = 3e-039
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +3
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 111 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 290
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 291 EGTFDAAIAGCDCVFHTASP 350
Score = 43.2 bits (88), Expect(3) = 3e-039
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +3
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 375 KAELLDPAVNGTLNVLRSCKK 437
Score = 32.2 bits (64), Expect(3) = 3e-039
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1 / +3
Query: 424 PNVLLDESSWSSIEFCESLQIWYAVA 501
P+V++DE+ +SS E CE + WY ++
Sbjct: 507 PDVVVDETWFSSAEVCEKNKQWYVLS 584
>gb|AV926665.1|AV926665 AV926665 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23e18 5', mRNA sequence
Length = 584
Score = 125 bits (267), Expect(3) = 3e-039
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +3
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 111 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 290
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 291 EGTFDAAIAGCDCVFHTASP 350
Score = 43.2 bits (88), Expect(3) = 3e-039
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +3
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 375 KAELLDPAVNGTLNVLRSCKK 437
Score = 32.2 bits (64), Expect(3) = 3e-039
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1 / +3
Query: 424 PNVLLDESSWSSIEFCESLQIWYAVA 501
P+V++DE+ +SS E CE + WY ++
Sbjct: 507 PDVVVDETWFSSAEVCEKNKQWYVLS 584
>gb|BU973416.1|BU973416 HB24O01r BC Hordeum vulgare subsp. vulgare cDNA clone HB24O01
5-PRIME, mRNA sequence
Length = 478
Score = 122 bits (262), Expect(3) = 8e-039
Identities = 53/81 (65%), Positives = 60/81 (74%)
Frame = +1 / +3
Query: 22 KVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLL 201
+VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LL
Sbjct: 9 RVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLL 188
Query: 202 EEGSFDDAVMACEGVFHTASP 264
EEG+ D A+ C+ VFHTASP
Sbjct: 189 EEGTXDAAIAGCDCVFHTASP 251
Score = 101 bits (215), Expect = 8e-021
Identities = 49/81 (60%), Positives = 54/81 (66%)
Frame = -1 / -1
Query: 263 GDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTFLPFPGSLTVPRTWYPD 84
G+AVWKT SQ A+SK+PSS + AL CSLS APSR RC FL S TV RT P
Sbjct: 250 GEAVWKTQSQPAMAASKVPSSNKLALNKCSLSLAPSRACRCNVFLGSAVSRTVARTV*PR 71
Query: 83 SRSRLTSQEAMKPDAPVTQTL 21
R LTSQEAM P+APVT TL
Sbjct: 70 WRRSLTSQEAM*PEAPVTHTL 8
Score = 43.2 bits (88), Expect(3) = 8e-039
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +3
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 276 KAELLDPAVNGTLNVLRSCKK 338
Score = 33.1 bits (66), Expect(3) = 8e-039
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1 / +3
Query: 424 PNVLLDESSWSSIEFCESLQIWY 492
P+V++DE+ +SS E CE Q WY
Sbjct: 408 PDVVVDETWFSSAEVCEKNQQWY 476
>gb|BG416654.1|BG416654 HVSMEk0014A07f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0014A07f, mRNA sequence
Length = 697
Score = 119 bits (255), Expect(3) = 9e-039
Identities = 51/92 (55%), Positives = 64/92 (69%)
Frame = +1 / +3
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KG V VTGASGF+ SWLV +LL++GY V TVRDP N +K L L GAKERL + +AD
Sbjct: 45 KGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKAD 224
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKE 291
L E+GSF++A+ C GVFH A+P+ S E
Sbjct: 225 LSEDGSFNEAIAGCTGVFHVATPMDFDSQDPE 320
Score = 59.3 bits (123), Expect(3) = 9e-039
Identities = 24/58 (41%), Positives = 36/58 (62%)
Frame = +1 / +3
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQGETGKF 663
Y V+K LAEKAA E+A E+ +D ++++PT VVGP L+ + P+ L L G +
Sbjct: 519 YFVSKALAEKAAMEYASENGLDFISIIPTLVVGPFLNAGMPPSLVTALALITGNEAHY 692
Score = 24.4 bits (47), Expect(3) = 9e-039
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 424 PNVLLDESSWSSIEFCESLQI 486
P D+ +WS I++C +++
Sbjct: 444 PRPAYDQDNWSDIDYCRRVKM 506
>gb|CK124748.1|CK124748 BES1824110d17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D1710 5-PRIME, mRNA sequence
Length = 683
Score = 119 bits (255), Expect(3) = 7e-038
Identities = 51/92 (55%), Positives = 64/92 (69%)
Frame = +1 / +2
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KG V VTGASGF+ SWLV +LL++GY V TVRDP N +K L L GAKERL + +AD
Sbjct: 50 KGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKAD 229
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKE 291
L E+GSF++A+ C GVFH A+P+ S E
Sbjct: 230 LSEDGSFNEAIAGCTGVFHVATPMDFDSQDPE 325
Score = 56.1 bits (116), Expect(3) = 7e-038
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = +1 / +2
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPT 618
Y V+K LAEKAA E+A E+ +D ++++PT VVGP LS + P+
Sbjct: 524 YFVSKALAEKAAMEYASENGLDFISIIPTLVVGPFLSAGMPPS 652
Score = 24.4 bits (47), Expect(3) = 7e-038
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFCESLQI 486
P D+ +WS I++C +++
Sbjct: 449 PRPAYDQDNWSDIDYCRRVKM 511
>gb|BG418564.2|BG418564 HVSMEk0023C20f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0023C20f, mRNA sequence
Length = 843
Score = 119 bits (255), Expect(3) = 8e-038
Identities = 51/92 (55%), Positives = 64/92 (69%)
Frame = +1 / +2
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KG V VTGASGF+ SWLV +LL++GY V TVRDP N +K L L GAKERL + +AD
Sbjct: 41 KGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKAD 220
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKE 291
L E+GSF++A+ C GVFH A+P+ S E
Sbjct: 221 LSEDGSFNEAIAGCTGVFHVATPMDFDSQDPE 316
Score = 56.5 bits (117), Expect(3) = 8e-038
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = +1 / +2
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQG 648
Y V+K LAEKAA E+A E+ +D ++++PT VVGP LS + P L L G
Sbjct: 515 YFVSKALAEKAAMEYASENGLDFISIIPTLVVGPFLSAGMPPRLVTGLSLNTG 673
Score = 24.4 bits (47), Expect(3) = 8e-038
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFCESLQI 486
P D+ +WS I++C +++
Sbjct: 440 PRPAYDQDNWSDIDYCRRVKM 502
>gb|BG414416.1|BG414416 HVSMEk0002H01f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002H01f, mRNA sequence
Length = 895
Score = 120 bits (256), Expect(3) = 9e-038
Identities = 51/92 (55%), Positives = 65/92 (70%)
Frame = +1 / +2
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KG V VTGASGF+ SWLV +LL++GY V TVRDP N +K L L GAKERL + +AD
Sbjct: 53 KGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKAD 232
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKE 291
L E+GSF++A+ C GVFH A+P+ S + E
Sbjct: 233 LSEDGSFNEAIAGCTGVFHVATPMDFDSQNPE 328
Score = 56.5 bits (117), Expect(3) = 9e-038
Identities = 24/87 (27%), Positives = 46/87 (52%)
Frame = +1 / +2
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQGETGKFTT 669
Y V+K L+EKAA ++A ++ + ++++PT VV P L+ + P L L +G F+
Sbjct: 527 YFVSKALSEKAAIDYAHQNGLKFISIIPTLVVSPFLNAGIAPNLVTALALIKGNQTHFSI 706
Query: 670 YGRMGYVHIDDVARCHMLAYEAAGARG 750
++ + H+D ++ A+G
Sbjct: 707 LKQVHFFHLDTFFNPITFPFQHPDAKG 787
Score = 24.0 bits (46), Expect(3) = 9e-038
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFCESLQI 486
P D+ +WS I++C ++
Sbjct: 452 PRPAYDQDNWSDIDYCRRFKM 514
>gb|BI960699.1|BI960699 HVSMEn0025O19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025O19f, mRNA sequence
Length = 661
Score = 66.1 bits (138), Expect(4) = 8e-037
Identities = 26/57 (45%), Positives = 34/57 (59%)
Frame = +1 / +2
Query: 427 NVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTL 597
+ ++DES WS +EFC+ + WY K A AAWE A R+DL+ P FV GP L
Sbjct: 479 DAVVDESCWSDLEFCKKTKNWYCYGKAAAXXAAWEAAXXTRVDLLW*TPCFVRGPAL 649
Score = 61.1 bits (127), Expect(4) = 8e-037
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +1 / +2
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGK 132
VCVTGA G+I SWLVK LL+ GY V GTVR+P + K
Sbjct: 95 VCVTGAGGYIGSWLVKLLLDKGYAVRGTVRNPDDAK 202
Score = 57.4 bits (119), Expect(4) = 8e-037
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / +2
Query: 133 KVGHLWGLEGAKERLQLVRADLLEEGSFDDAVMACEGVFHTASPV 267
K HL L GA ERL L +ADLL+ + A+ C GVFHTASPV
Sbjct: 200 KNAHLRALAGAAERLVLCKADLLDGDALRQAIAGCHGVFHTASPV 334
Score = 54.7 bits (113), Expect(3) = 2e-021
Identities = 27/54 (50%), Positives = 30/54 (55%)
Frame = -1 / -2
Query: 293 SSLELDPVTTGDAVWKTPSQAITASSKLPSSKRSALTSCSLSFAPSRPQRCPTF 132
S++ TGDAVWKTP Q A S RSAL S SLS AP+R RC F
Sbjct: 360 STISSGSSVTGDAVWKTPWQPAMAWRSASPSSRSALHSTSLSAAPARALRCAFF 199
Score = 47.3 bits (97), Expect(3) = 2e-021
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = -1 / -2
Query: 134 FLPFPGSLTVPRTWYPDSRSRLTSQEAMKPDAPVTQTL 21
F G LTVPRT YP SR LTS + M P APVT T+
Sbjct: 204 FFASSGFLTVPRTAYPLSRRSLTSHDPM*PPAPVTHTV 91
Score = 38.2 bits (77), Expect(3) = 2e-021
Identities = 24/71 (33%), Positives = 25/71 (35%)
Frame = -1 / -2
Query: 596 RVGPTTKVGRTVTRSILCSPANSQAAFSARIFATAYHIWRLSQNSMELHDDXXXXXXXXX 417
R GP TK G RS A S AA SA F Y QNS L D
Sbjct: 648 RAGPRTKHGVHHNRSTRVXXAASHAAXSAAAFP*QYQFLVFLQNSRSLQQDSSTTASAPR 469
Query: 416 XXXXLILTVDD 384
I +DD
Sbjct: 468 LGSMAIAPMDD 436
Score = 25.4 bits (49), Expect(4) = 8e-037
Identities = 7/19 (36%), Positives = 15/19 (78%)
Frame = +1 / +2
Query: 277 SNSKEEMLDSAINGTMNVL 333
++ EEM++ A+ GT+N++
Sbjct: 335 TDDPEEMVEPAVRGTLNII 391
>gb|BI955632.1|BI955632 HVSMEm0023N15f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0023N15f, mRNA sequence
Length = 678
Score = 114 bits (244), Expect(3) = 8e-037
Identities = 50/80 (62%), Positives = 58/80 (72%)
Frame = +1 / +2
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWL+K +L Y V TVRD + KK HL LE AKERL L +A LLE
Sbjct: 113 VCVTGASGYIASWLIKGVLGRXYTVRATVRDTDDPKKTLHLQALEVAKERLHLFKASLLE 292
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 293 EGTFDAAIAGCDCVFHTASP 352
Score = 43.2 bits (88), Expect(3) = 8e-037
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +2
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 377 KAELLDPAVNGTLNVLRSCKK 439
Score = 34.5 bits (69), Expect(3) = 8e-037
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWE 531
P+V++DE+ +SS CE WY +++ LAE+ E
Sbjct: 509 PDVVIDETWFSSGRVCEKR*HWYVLSQTLAEEGCVE 616
>gb|BJ544054.1|BJ544054 BJ544054 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak18h07 5', mRNA sequence
Length = 521
Score = 120 bits (257), Expect(3) = 8e-037
Identities = 52/81 (64%), Positives = 60/81 (74%)
Frame = +1 / +2
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASW+VK LL+ GY V GTVRD + K HL L+GA +RL L A+LLE
Sbjct: 56 VCVTGASGYIASWIVKLLLDRGYTVHGTVRDTADPNKTLHLRALDGANDRLHLFNANLLE 235
Query: 205 EGSFDDAVMACEGVFHTASPV 267
EGSFD A+ CE VFH ASPV
Sbjct: 236 EGSFDAAIDGCECVFHAASPV 298
Score = 111 bits (238), Expect = 5e-024
Identities = 57/122 (46%), Positives = 70/122 (57%)
Frame = -1 / -3
Query: 389 DDEDVRTTLLSDGFFLHERSTFIVPFIAESSISSLELDPVTTGDAVWKTPSQAITASSKL 210
D +DV TTLL++ F ++ + S+ + L TG+A W T SQ A+SK
Sbjct: 420 DIDDVTTTLLTEAFLQERKTLSVPLTAESSNSALGSLAAKKTGEAAWNTHSQPSMAASKE 241
Query: 209 PSSKRSALTSCSLSFAPSRPQRCPTFLPFPGSLTVPRTWYPDSRSRLTSQEAMKPDAPVT 30
PSS + AL CSLSFAPSR +RC S TVP T P SR LT Q+AM PDAPVT
Sbjct: 240 PSSNKFALNRCSLSFAPSRARRCNVLFGSAVSRTVPWTV*PRSRRSLTIQDAMYPDAPVT 61
Query: 29 QT 24
QT
Sbjct: 60 QT 55
Score = 43.2 bits (88), Expect(3) = 8e-037
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LDSA++GT+NVLRSCKK
Sbjct: 320 KAELLDSAVSGTLNVLRSCKK 382
Score = 28.6 bits (56), Expect(3) = 8e-037
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFCESLQIWY 492
P+V++DE+ +S E C+ Q WY
Sbjct: 452 PDVIVDETWFSLPELCKKNQQWY 520
>gb|BE455022.2|BE455022 HVSMEh0095O05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095O05f, mRNA sequence
Length = 717
Score = 119 bits (255), Expect(3) = 1e-036
Identities = 51/92 (55%), Positives = 64/92 (69%)
Frame = +1 / +1
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KG V VTGASGF+ SWLV +LL++GY V TVRDP N +K L L GAKERL + +AD
Sbjct: 52 KGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKAD 231
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKE 291
L E+GSF++A+ C GVFH A+P+ S E
Sbjct: 232 LSEDGSFNEAIAGCTGVFHVATPMDFDSQDPE 327
Score = 51.9 bits (107), Expect(3) = 1e-036
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +1 / +1
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQGETGKFT 666
Y V+K LAEKAA E+A E+ +D ++++PT VV P L+ + + L L G ++
Sbjct: 526 YFVSKALAEKAAMEYASENGLDFISIIPTLVVRPFLNAGMPASLVTXLALITGNEAHYS 702
Score = 24.4 bits (47), Expect(3) = 1e-036
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 424 PNVLLDESSWSSIEFCESLQI 486
P D+ +WS I++C +++
Sbjct: 451 PRPAYDQDNWSDIDYCRRVKM 513
>gb|BE196379.3|BE196379 HVSMEh0092C06f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092C06f, mRNA sequence
Length = 941
Score = 125 bits (267), Expect(3) = 2e-036
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +2
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 143 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 322
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 323 EGTFDAAIAGCDCVFHTASP 382
Score = 43.2 bits (88), Expect(3) = 2e-036
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +2
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 407 KAELLDPAVNGTLNVLRSCKK 469
Score = 27.6 bits (54), Expect(3) = 2e-036
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1 / +1
Query: 487 WYAVAKILAEKAAW 528
WY ++K LAE AAW
Sbjct: 601 WYVLSKTLAEGAAW 642
>gb|BE194523.2|BE194523 HVSMEh0085O04f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0085O04f, mRNA sequence
Length = 842
Score = 119 bits (255), Expect(3) = 1e-035
Identities = 51/92 (55%), Positives = 64/92 (69%)
Frame = +1 / +2
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KG V VTGASGF+ SWLV +LL++GY V TVRDP N +K L L GAKERL + +AD
Sbjct: 53 KGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKAD 232
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKE 291
L E+GSF++A+ C GVFH A+P+ S E
Sbjct: 233 LSEDGSFNEAIAGCTGVFHVATPMDFDSQDPE 328
Score = 49.2 bits (101), Expect(3) = 1e-035
Identities = 18/34 (52%), Positives = 27/34 (79%)
Frame = +1 / +2
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGP 591
Y V+K LA+KAA E+A E+ +D ++++PT VVGP
Sbjct: 527 YFVSKALAKKAAMEYASENGLDFISIIPTLVVGP 628
Score = 24.4 bits (47), Expect(3) = 1e-035
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFCESLQI 486
P D+ +WS I++C +++
Sbjct: 452 PRPAYDQDNWSDIDYCRRVKM 514
>gb|BF253936.2|BF253936 HVSMEf0002I16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002I16f, mRNA sequence
Length = 609
Score = 125 bits (267), Expect(2) = 5e-035
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +1
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 91 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 270
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 271 EGTFDAAIAGCDCVFHTASP 330
Score = 43.2 bits (88), Expect(2) = 5e-035
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +1
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 355 KAELLDPAVNGTLNVLRSCKK 417
>gb|CA020126.1|CA020126 HV14G15r HV Hordeum vulgare subsp. vulgare cDNA clone HV14G15
5-PRIME, mRNA sequence
Length = 568
Score = 125 bits (267), Expect(2) = 5e-035
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +1
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 124 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 303
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 304 EGTFDAAIAGCDCVFHTASP 363
Score = 43.2 bits (88), Expect(2) = 5e-035
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +1
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 388 KAELLDPAVNGTLNVLRSCKK 450
>gb|BQ459797.1|BQ459797 HA08A23r HA Hordeum vulgare subsp. vulgare cDNA clone HA08A23
5-PRIME, mRNA sequence
Length = 497
Score = 125 bits (267), Expect(2) = 5e-035
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +3
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 129 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 308
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 309 EGTFDAAIAGCDCVFHTASP 368
Score = 43.2 bits (88), Expect(2) = 5e-035
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +3
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 393 KAELLDPAVNGTLNVLRSCKK 455
>gb|BF628107.2|BF628107 HVSMEb0003C11f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0003C11f, mRNA sequence
Length = 495
Score = 125 bits (267), Expect(2) = 5e-035
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +3
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 90 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 269
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 270 EGTFDAAIAGCDCVFHTASP 329
Score = 43.2 bits (88), Expect(2) = 5e-035
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +3
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 354 KAELLDPAVNGTLNVLRSCKK 416
>gb|CA002692.1|CA002692 HS08E02r HS Hordeum vulgare subsp. vulgare cDNA clone HS08E02
5-PRIME, mRNA sequence
Length = 453
Score = 125 bits (267), Expect(2) = 5e-035
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +1
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 94 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 273
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 274 EGTFDAAIAGCDCVFHTASP 333
Score = 43.2 bits (88), Expect(2) = 5e-035
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +1
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 358 KAELLDPAVNGTLNVLRSCKK 420
>gb|CA021911.1|CA021911 HZ41I09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41I09
5-PRIME, mRNA sequence
Length = 414
Score = 125 bits (267), Expect(2) = 5e-035
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +1
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 37 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 216
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 217 EGTFDAAIAGCDCVFHTASP 276
Score = 43.2 bits (88), Expect(2) = 5e-035
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +1
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 301 KAELLDPAVNGTLNVLRSCKK 363
>gb|BG415143.1|BG415143 HVSMEk0005F01f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005F01f, mRNA sequence
Length = 657
Score = 119 bits (255), Expect(3) = 6e-035
Identities = 51/92 (55%), Positives = 64/92 (69%)
Frame = +1 / +1
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KG V VTGASGF+ SWLV +LL++GY V TVRDP N +K L L GAKERL + +AD
Sbjct: 31 KGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKAD 210
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKE 291
L E+GSF++A+ C GVFH A+P+ S E
Sbjct: 211 LSEDGSFNEAIAGCTGVFHVATPMDFDSQDPE 306
Score = 46.0 bits (94), Expect(3) = 6e-035
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +1 / +1
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLS 600
Y V+K LAEKAA E+A E+ + ++++PT VV P L+
Sbjct: 505 YFVSKALAEKAAMEYASENGLXFISIIPTLVVXPFLN 615
Score = 24.4 bits (47), Expect(3) = 6e-035
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 424 PNVLLDESSWSSIEFCESLQI 486
P D+ +WS I++C +++
Sbjct: 430 PRPAYDQDNWSDIDYCRRVKM 492
>gb|BG418101.2|BG418101 HVSMEk0021F02f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0021F02f, mRNA sequence
Length = 671
Score = 119 bits (255), Expect(3) = 7e-035
Identities = 51/92 (55%), Positives = 64/92 (69%)
Frame = +1 / +2
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KG V VTGASGF+ SWLV +LL++GY V TVRDP N +K L L GAKERL + +AD
Sbjct: 41 KGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKAD 220
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKE 291
L E+GSF++A+ C GVFH A+P+ S E
Sbjct: 221 LSEDGSFNEAIAGCTGVFHVATPMDFDSQDPE 316
Score = 46.0 bits (94), Expect(3) = 7e-035
Identities = 17/34 (50%), Positives = 26/34 (76%)
Frame = +1 / +2
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGP 591
Y V+K LA+KAA E+A E+ +D ++++PT VV P
Sbjct: 515 YFVSKALAKKAAMEYASENGLDFISIIPTLVVXP 616
Score = 24.4 bits (47), Expect(3) = 7e-035
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFCESLQI 486
P D+ +WS I++C +++
Sbjct: 440 PRPAYDQDNWSDIDYCRRVKM 502
>gb|BQ458877.1|BQ458877 HA02P13r HA Hordeum vulgare subsp. vulgare cDNA clone HA02P13
5-PRIME, mRNA sequence
Length = 622
Score = 119 bits (255), Expect(3) = 4e-034
Identities = 51/92 (55%), Positives = 64/92 (69%)
Frame = +1 / +3
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KG V VTGASGF+ SWLV +LL++GY V TVRDP N +K L L GAKERL + +AD
Sbjct: 54 KGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKAD 233
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKE 291
L E+GSF++A+ C GVFH A+P+ S E
Sbjct: 234 LSEDGSFNEAIAGCTGVFHVATPMDFDSQDPE 329
Score = 43.2 bits (88), Expect(3) = 4e-034
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +1 / +3
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFV 582
Y V+K LAEKAA E+A E+ +D ++++PT V
Sbjct: 528 YFVSKALAEKAAMEYASENGLDFISIIPTLV 620
Score = 24.4 bits (47), Expect(3) = 4e-034
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 424 PNVLLDESSWSSIEFCESLQI 486
P D+ +WS I++C +++
Sbjct: 453 PRPAYDQDNWSDIDYCRRVKM 515
>gb|BG414757.2|BG414757 HVSMEk0003J21f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003J21f, mRNA sequence
Length = 625
Score = 119 bits (255), Expect(3) = 7e-034
Identities = 51/92 (55%), Positives = 64/92 (69%)
Frame = +1 / +3
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KG V VTGASGF+ SWLV +LL++GY V TVRDP N +K L L GAKERL + +AD
Sbjct: 54 KGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKAD 233
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKE 291
L E+GSF++A+ C GVFH A+P+ S E
Sbjct: 234 LSEDGSFNEAIAGCTGVFHVATPMDFDSQDPE 329
Score = 42.3 bits (86), Expect(3) = 7e-034
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +1 / +2
Query: 496 VAKILAEKAAWEFAGEHRIDLVTVLPTFVVG 588
V+K LAEKAA E+A E+ + ++++PT VVG
Sbjct: 533 VSKALAEKAAMEYASENGLXFISIIPTLVVG 625
Score = 24.4 bits (47), Expect(3) = 7e-034
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 424 PNVLLDESSWSSIEFCESLQI 486
P D+ +WS I++C +++
Sbjct: 453 PRPAYDQDNWSDIDYCRRVKM 515
>gb|BF259786.2|BF259786 HVSMEf0020E05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020E05f, mRNA sequence
Length = 534
Score = 121 bits (258), Expect(2) = 8e-034
Identities = 53/80 (66%), Positives = 59/80 (73%)
Frame = +1 / +1
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+I SWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 118 VCVTGASGYIDSWLVKLLLHRGYTVRATVRDTVDPKKTLHLQALEGAKERLHLFKASLLE 297
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 298 EGTFDAAIAGCDCVFHTASP 357
Score = 43.2 bits (88), Expect(2) = 8e-034
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +1
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LD A+NGT+NVLRSCKK
Sbjct: 382 KAELLDPAVNGTLNVLRSCKK 444
>gb|BE454559.2|BE454559 HVSMEh0094E03f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094E03f, mRNA sequence
Length = 894
Score = 120 bits (257), Expect(2) = 1e-033
Identities = 52/81 (64%), Positives = 60/81 (74%)
Frame = +1 / +1
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASW+VK LL+ GY V GTVRD + K HL L+GA +RL L A+LLE
Sbjct: 100 VCVTGASGYIASWIVKLLLDRGYTVHGTVRDTADPNKTLHLRALDGANDRLHLFNANLLE 279
Query: 205 EGSFDDAVMACEGVFHTASPV 267
EGSFD A+ CE VFH ASPV
Sbjct: 280 EGSFDAAIDGCECVFHAASPV 342
Score = 110 bits (235), Expect = 1e-023
Identities = 56/120 (46%), Positives = 69/120 (57%)
Frame = -1 / -2
Query: 383 EDVRTTLLSDGFFLHERSTFIVPFIAESSISSLELDPVTTGDAVWKTPSQAITASSKLPS 204
+DV TTLL++ F ++ + S+ + L TG+A W T SQ A+SK PS
Sbjct: 458 DDVMTTLLTEAFLQERKTLSVPLTAESSNSALGSLAAKKTGEAAWNTHSQPSMAASKEPS 279
Query: 203 SKRSALTSCSLSFAPSRPQRCPTFLPFPGSLTVPRTWYPDSRSRLTSQEAMKPDAPVTQT 24
S + AL CSLSFAPSR +RC S TVP T P SR LT Q+AM PDAPVTQT
Sbjct: 278 SNKFALNRCSLSFAPSRARRCNVLFGSAVSRTVPWTV*PRSRRSLTIQDAMYPDAPVTQT 99
Score = 43.2 bits (88), Expect(2) = 1e-033
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +1 / +1
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LDSA++GT+NVLRSCKK
Sbjct: 364 KAELLDSAVSGTLNVLRSCKK 426
>gb|BF265665.2|BF265665 HV_CEa0013A06f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013A06f, mRNA sequence
Length = 770
Score = 120 bits (257), Expect(2) = 1e-033
Identities = 52/81 (64%), Positives = 60/81 (74%)
Frame = +1 / +2
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASW+VK LL+ GY V GTVRD + K HL L+GA +RL L A+LLE
Sbjct: 89 VCVTGASGYIASWIVKLLLDRGYTVHGTVRDTADPNKTLHLRALDGANDRLHLFNANLLE 268
Query: 205 EGSFDDAVMACEGVFHTASPV 267
EGSFD A+ CE VFH ASPV
Sbjct: 269 EGSFDAAIDGCECVFHAASPV 331
Score = 110 bits (235), Expect = 1e-023
Identities = 56/120 (46%), Positives = 69/120 (57%)
Frame = -1 / -3
Query: 383 EDVRTTLLSDGFFLHERSTFIVPFIAESSISSLELDPVTTGDAVWKTPSQAITASSKLPS 204
+DV TTLL++ F ++ + S+ + L TG+A W T SQ A+SK PS
Sbjct: 447 DDVMTTLLTEAFLQERKTLSVPLTAESSNSALGSLAAKKTGEAAWNTHSQPSMAASKEPS 268
Query: 203 SKRSALTSCSLSFAPSRPQRCPTFLPFPGSLTVPRTWYPDSRSRLTSQEAMKPDAPVTQT 24
S + AL CSLSFAPSR +RC S TVP T P SR LT Q+AM PDAPVTQT
Sbjct: 267 SNKFALNRCSLSFAPSRARRCNVLFGSAVSRTVPWTV*PRSRRSLTIQDAMYPDAPVTQT 88
Score = 43.2 bits (88), Expect(2) = 1e-033
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 286 KEEMLDSAINGTMNVLRSCKK 348
K E+LDSA++GT+NVLRSCKK
Sbjct: 353 KAELLDSAVSGTLNVLRSCKK 415
>gb|BU980158.1|BU980158 HA18N13r HA Hordeum vulgare subsp. vulgare cDNA clone HA18N13
5-PRIME, mRNA sequence
Length = 399
Score = 125 bits (267), Expect(2) = 1e-033
Identities = 54/80 (67%), Positives = 60/80 (75%)
Frame = +1 / +1
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGASG+IASWLVK LL GY V TVRD + KK HL LEGAKERL L +A LLE
Sbjct: 79 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPKKTLHLQALEGAKERLHLFKASLLE 258
Query: 205 EGSFDDAVMACEGVFHTASP 264
EG+FD A+ C+ VFHTASP
Sbjct: 259 EGTFDAAIAGCDCVFHTASP 318
Score = 38.6 bits (78), Expect(2) = 1e-033
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1 / +1
Query: 286 KEEMLDSAINGTMNVLRSC 342
K E+LD A+NGT+NVLRSC
Sbjct: 343 KAELLDPAVNGTLNVLRSC 399
>gb|BE519901.1|BE519901 HV_CEb0021K08f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021K08f, mRNA sequence
Length = 721
Score = 61.6 bits (128), Expect(5) = 2e-033
Identities = 27/46 (58%), Positives = 32/46 (69%)
Frame = +1 / +2
Query: 10 TAKGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHL 147
T + CVTG SG+IAS LVK LLE GY V TVR+P +G+K HL
Sbjct: 92 TRRKTACVTGGSGYIASALVKMLLEKGYAVKTTVRNPDDGEKNAHL 229
Score = 48.3 bits (99), Expect(5) = 2e-033
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1 / +2
Query: 175 LQLVRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSKEE 294
L++ RADL EEGSFDDAV C+ F A+PV + EE
Sbjct: 254 LEVFRADLNEEGSFDDAVAGCDYAFLVAAPVALMPENAEE 373
Score = 45.1 bits (92), Expect(5) = 2e-033
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +1 / +2
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVL 633
Y +K+LAEKAA FA E+ + LVTV P VVG + ++ + +VL
Sbjct: 575 YPASKVLAEKAAMAFAEENGLSLVTVCPVVVVGGAPARKVKTSVPEVL 718
Score = 36.8 bits (74), Expect(5) = 2e-033
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +1 / +2
Query: 280 NSKEEMLDSAINGTMNVLRSCKK 348
N++EE++ AI GT+NV+RSC K
Sbjct: 362 NAEEEVIQPAIQGTLNVMRSCVK 430
Score = 24.0 bits (46), Expect(5) = 2e-033
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1 / +2
Query: 433 LLDESSWSSIEF 468
+LDE SWS +E+
Sbjct: 509 VLDEDSWSDVEY 544
>gb|BJ463463.1|BJ463463 BJ463463 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32a03 5', mRNA sequence
Length = 662
Score = 104 bits (222), Expect(2) = 3e-033
Identities = 48/97 (49%), Positives = 58/97 (59%)
Frame = +1 / +1
Query: 4 ANTAKGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQL 183
A + VCVTGA GF+ASWLVK LL ++ + K HL LEGA ERLQL
Sbjct: 31 AAAKRSVVCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQL 210
Query: 184 VRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSKEE 294
+ ADLL+ S AV CEGVFH ASPV +G ++ E
Sbjct: 211 LSADLLDYDSIASAVAGCEGVFHVASPVPSGRSTNPE 321
Score = 60.6 bits (126), Expect(2) = 3e-033
Identities = 22/71 (30%), Positives = 41/71 (57%)
Frame = +1 / +1
Query: 421 PPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLS 600
P + E SWS + C + WY ++K AE+ A+ +A + +D+V +LP+ V+GP +
Sbjct: 445 PKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQ 624
Query: 601 PELGPTASDVL 633
P + ++ +L
Sbjct: 625 PTVNASSKILL 657
>gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022F12f, mRNA sequence
Length = 697
Score = 104 bits (222), Expect(2) = 3e-033
Identities = 48/97 (49%), Positives = 58/97 (59%)
Frame = +1 / +1
Query: 4 ANTAKGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQL 183
A + VCVTGA GF+ASWLVK LL ++ + K HL LEGA ERLQL
Sbjct: 58 AAAKRSVVCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQL 237
Query: 184 VRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSKEE 294
+ ADLL+ S AV CEGVFH ASPV +G ++ E
Sbjct: 238 LSADLLDYDSIASAVAGCEGVFHVASPVPSGRSTNPE 348
Score = 60.6 bits (126), Expect(2) = 3e-033
Identities = 22/71 (30%), Positives = 41/71 (57%)
Frame = +1 / +1
Query: 421 PPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLS 600
P + E SWS + C + WY ++K AE+ A+ +A + +D+V +LP+ V+GP +
Sbjct: 472 PKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQ 651
Query: 601 PELGPTASDVL 633
P + ++ +L
Sbjct: 652 PTVNASSKILL 684
>gb|BE601965.2|BE601965 HVSMEh0100J12f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0100J12f, mRNA sequence
Length = 710
Score = 102 bits (217), Expect(3) = 4e-033
Identities = 44/92 (47%), Positives = 60/92 (65%)
Frame = +1 / +3
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KG V VTGASGF+ SWLV +LL++GY V TVRDPGN +K L L G +E + + +
Sbjct: 42 KGPVVVTGASGFVRSWLVMKLLQAGYTVRATVRDPGNVEKTKPLVELSGTQEPVAIWKGH 221
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKE 291
L E+G+F+ A+ +GVFH A+P+ S E
Sbjct: 222 LNEDGNFNQAIAGLDGVFHVATPMDFDSQDPE 317
Score = 57.4 bits (119), Expect(3) = 4e-033
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +1 / +3
Query: 490 YAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGL 639
Y V+K LAEKAA E+A E+ +D ++++PT VVGP LS + P+ L L
Sbjct: 516 YFVSKALAEKAAMEYASENGLDFISIIPTLVVGPFLSAGMPPSLVTXLAL 665
Score = 24.4 bits (47), Expect(3) = 4e-033
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 424 PNVLLDESSWSSIEFCESLQI 486
P D+ +WS I++C +++
Sbjct: 441 PRPAYDQDNWSDIDYCRRVKM 503
>gb|BG415963.1|BG415963 HVSMEk0009D15f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0009D15f, mRNA sequence
Length = 961
Score = 119 bits (255), Expect(3) = 4e-033
Identities = 51/92 (55%), Positives = 64/92 (69%)
Frame = +1 / +2
Query: 16 KGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRAD 195
KG V VTGASGF+ SWLV +LL++GY V TVRDP N +K L L GAKERL + +AD
Sbjct: 50 KGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKAD 229
Query: 196 LLEEGSFDDAVMACEGVFHTASPVVTGSNSKE 291
L E+GSF++A+ C GVFH A+P+ S E
Sbjct: 230 LSEDGSFNEAIAGCTGVFHVATPMDFDSQDPE 325
Score = 41.8 bits (85), Expect(3) = 4e-033
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1 / +3
Query: 508 LAEKAAWEFAGEHRIDLVTVLPTFVVGPTLSPELGPTASDVLGLFQGE 651
L ++ E+A E+ +D ++++PT VVGP LS + + L L GE
Sbjct: 543 LQKRPPLEYASENGLDFISIIPTLVVGPFLSAGMPASLVTALALITGE 686
Score = 23.5 bits (45), Expect(3) = 4e-033
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +1 / +2
Query: 424 PNVLLDESSWSSIEFC 471
P D+ +WS I++C
Sbjct: 449 PRPAYDQDNWSDIDYC 496
>gb|BJ464137.1|BJ464137 BJ464137 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33a09 5', mRNA sequence
Length = 663
Score = 104 bits (222), Expect(2) = 5e-033
Identities = 48/97 (49%), Positives = 58/97 (59%)
Frame = +1 / +1
Query: 4 ANTAKGKVCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQL 183
A + VCVTGA GF+ASWLVK LL ++ + K HL LEGA ERLQL
Sbjct: 49 AAAKRSVVCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQL 228
Query: 184 VRADLLEEGSFDDAVMACEGVFHTASPVVTGSNSKEE 294
+ ADLL+ S AV CEGVFH ASPV +G ++ E
Sbjct: 229 LSADLLDYDSIASAVAGCEGVFHVASPVPSGRSTNPE 339
Score = 59.7 bits (124), Expect(2) = 5e-033
Identities = 21/67 (31%), Positives = 39/67 (58%)
Frame = +1 / +1
Query: 421 PPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLS 600
P + E SWS + C + WY ++K AE+ A+ +A + +D+V +LP+ V+GP +
Sbjct: 463 PKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQ 642
Query: 601 PELGPTA 621
P + ++
Sbjct: 643 PTVNASS 663
>gb|AL506722.1|AL506722 AL506722 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04A23T 5',
mRNA sequence
Length = 619
Score = 104 bits (221), Expect(2) = 6e-033
Identities = 47/90 (52%), Positives = 56/90 (62%)
Frame = +1 / +2
Query: 25 VCVTGASGFIASWLVKRLLESGYHVLGTVRDPGNGKKVGHLWGLEGAKERLQLVRADLLE 204
VCVTGA GF+ASWLVK LL ++ + K HL LEGA ERLQL+ ADLL+
Sbjct: 17 VCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLD 196
Query: 205 EGSFDDAVMACEGVFHTASPVVTGSNSKEE 294
S AV CEGVFH ASPV +G ++ E
Sbjct: 197 YDSIASAVAGCEGVFHVASPVPSGRSTNPE 286
Score = 59.7 bits (124), Expect(2) = 6e-033
Identities = 21/67 (31%), Positives = 39/67 (58%)
Frame = +1 / +2
Query: 421 PPNVLLDESSWSSIEFCESLQIWYAVAKILAEKAAWEFAGEHRIDLVTVLPTFVVGPTLS 600
P + E SWS + C + WY ++K AE+ A+ +A + +D+V +LP+ V+GP +
Sbjct: 410 PKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQ 589
Query: 601 PELGPTA 621
P + ++
Sbjct: 590 PTVNASS 610
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 500,138,504
Number of Sequences: 312970
Number of extensions: 9712604
Number of successful extensions: 230753
Number of sequences better than 1.0e-020: 244
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 12925847873
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)