TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3107376.2.2
(1851 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedl... 108 1e-078
gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedl... 205 4e-076
gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare s... 209 6e-074
gb|BF627742.1|BF627742 HVSMEb0005K21f Hordeum vulgare seedl... 177 5e-073
gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA li... 173 6e-070
gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA li... 203 7e-070
gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA li... 213 3e-069
gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA li... 159 7e-069
gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA li... 199 7e-067
gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA li... 186 2e-066
gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. v... 183 5e-066
gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA li... 203 3e-064
gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA li... 203 7e-064
gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA li... 203 1e-063
gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA li... 205 2e-063
gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA li... 203 8e-062
gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA li... 203 3e-060
gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA li... 203 3e-060
gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA li... 203 3e-060
gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA li... 205 3e-060
gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA li... 195 4e-060
gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA li... 203 7e-060
gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA li... 205 2e-059
gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA li... 203 2e-059
gb|AV917238.1|AV917238 AV917238 K. Sato unpublished cDNA li... 91 2e-059
gb|BQ471556.1|BQ471556 HV02M13r HV Hordeum vulgare subsp. v... 126 4e-059
gb|BG301073.1|BG301073 HVSMEb0019H09f Hordeum vulgare seedl... 175 5e-058
gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA li... 124 5e-058
gb|AV934098.1|AV934098 AV934098 K. Sato unpublished cDNA li... 111 7e-058
gb|BE420993.1|BE420993 HWM004.F10 ITEC HWM Barley Leaf Libr... 138 2e-057
gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA li... 205 6e-057
gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA li... 172 9e-057
gb|BE214490.1|BE214490 HV_CEb0003J19f Hordeum vulgare seedl... 122 4e-056
gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA li... 203 8e-056
gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA li... 216 2e-055
gb|BF621561.1|BF621561 HVSMEa0011G21f Hordeum vulgare seedl... 169 7e-055
gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA li... 200 2e-054
gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA li... 213 2e-054
gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA li... 199 5e-054
gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA li... 197 2e-053
gb|AV912854.1|AV912854 AV912854 K. Sato unpublished cDNA li... 210 3e-053
gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA li... 193 6e-053
gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA li... 205 5e-052
gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA li... 205 5e-052
gb|BE602159.2|BE602159 HVSMEh0102M13f Hordeum vulgare 5-45 ... 113 1e-051
gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA li... 149 1e-051
gb|BJ463196.1|BJ463196 BJ463196 K. Sato unpublished cDNA li... 115 1e-051
gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA li... 191 1e-051
gb|AV918446.1|AV918446 AV918446 K. Sato unpublished cDNA li... 190 2e-051
gb|AV934105.1|AV934105 AV934105 K. Sato unpublished cDNA li... 134 3e-051
gb|CA009631.1|CA009631 HU14K18r HU Hordeum vulgare subsp. v... 131 3e-050
gb|AV918673.1|AV918673 AV918673 K. Sato unpublished cDNA li... 184 1e-049
gb|AV913374.1|AV913374 AV913374 K. Sato unpublished cDNA li... 184 1e-049
gb|BJ547149.1|BJ547149 BJ547149 K. Sato unpublished cDNA li... 111 2e-048
gb|BF261803.3|BF261803 HV_CEa0002E08f Hordeum vulgare seedl... 109 2e-048
gb|AV932347.1|AV932347 AV932347 K. Sato unpublished cDNA li... 121 2e-048
gb|CA017939.1|CA017939 HV06O02r HV Hordeum vulgare subsp. v... 119 4e-048
gb|AV915851.1|AV915851 AV915851 K. Sato unpublished cDNA li... 111 1e-047
gb|BM816704.1|BM816704 HB01G04_T3.ab1 HB Hordeum vulgare su... 107 1e-047
gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA li... 119 2e-047
gb|AV934261.1|AV934261 AV934261 K. Sato unpublished cDNA li... 121 7e-047
gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa... 156 8e-047
emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for p... 89 4e-045
gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P4... 85 2e-044
gb|BJ460485.1|BJ460485 BJ460485 K. Sato unpublished cDNA li... 177 3e-044
gb|CA019622.1|CA019622 HV12J09r HV Hordeum vulgare subsp. v... 91 5e-044
gb|CA018489.1|CA018489 HV08M10r HV Hordeum vulgare subsp. v... 178 7e-044
gb|BJ464493.1|BJ464493 BJ464493 K. Sato unpublished cDNA li... 91 1e-043
gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. v... 129 6e-043
gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA li... 152 6e-043
gb|CA013705.1|CA013705 HT09E03r HT Hordeum vulgare subsp. v... 78 1e-042
gb|BI952196.1|BI952196 HVSMEm0004P09f Hordeum vulgare green... 107 3e-042
gb|BG300331.1|BG300331 HVSMEb0012I19f Hordeum vulgare seedl... 172 6e-042
gb|AV921548.1|AV921548 AV921548 K. Sato unpublished cDNA li... 148 9e-042
gb|BE196002.1|BE196002 HVSMEh0091B12f Hordeum vulgare 5-45 ... 136 2e-041
gb|AV923778.1|AV923778 AV923778 K. Sato unpublished cDNA li... 169 5e-041
gb|CA019109.1|CA019109 HV10M21r HV Hordeum vulgare subsp. v... 169 5e-041
gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachi... 124 6e-041
gb|BF065379.1|BF065379 HV_CEb0012E10f Hordeum vulgare seedl... 135 6e-041
gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA li... 120 2e-040
gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA li... 120 2e-040
gb|BF259778.3|BF259778 HVSMEf0020D20f Hordeum vulgare seedl... 112 4e-040
gb|BJ461185.1|BJ461185 BJ461185 K. Sato unpublished cDNA li... 166 5e-040
gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA li... 119 6e-040
gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedl... 144 8e-040
gb|BF253422.2|BF253422 HVSMEf0001G02f Hordeum vulgare seedl... 164 1e-039
gb|BI776301.2|BI776301 EBem04_SQ001_H10_R embryo, 12 DPA, n... 164 2e-039
gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA li... 117 2e-039
gb|AV930901.1|AV930901 AV930901 K. Sato unpublished cDNA li... 150 2e-039
gb|AV925764.1|AV925764 AV925764 K. Sato unpublished cDNA li... 163 3e-039
gb|BG416486.2|BG416486 HVSMEk0012I14f Hordeum vulgare testa... 155 4e-039
gb|BG344914.2|BG344914 HVSMEg0016N10f Hordeum vulgare pre-a... 127 7e-039
gb|AJ434580.1|AJ434580 AJ434580 S00002 Hordeum vulgare subs... 100 7e-039
gb|CA012725.1|CA012725 HT06E05r HT Hordeum vulgare subsp. v... 124 1e-038
gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedl... 124 3e-038
gb|BI958239.1|BI958239 HVSMEn0014A11f Hordeum vulgare rachi... 148 5e-038
gb|AV925268.1|AV925268 AV925268 K. Sato unpublished cDNA li... 122 6e-038
gb|BG299744.1|BG299744 HVSMEa0021K06f Hordeum vulgare seedl... 123 2e-037
gb|AV913156.1|AV913156 AV913156 K. Sato unpublished cDNA li... 101 2e-036
gb|CA030582.1|CA030582 HX07H18r HX Hordeum vulgare subsp. v... 100 3e-035
gb|AV922397.1|AV922397 AV922397 K. Sato unpublished cDNA li... 102 6e-035
gb|BJ466913.1|BJ466913 BJ466913 K. Sato unpublished cDNA li... 102 6e-035
gb|CA015705.1|CA015705 HV12J09u HV Hordeum vulgare subsp. v... 148 9e-035
gb|CA006248.1|CA006248 HU14K18u HU Hordeum vulgare subsp. v... 127 1e-034
gb|BU999462.1|BU999462 HI14J11r HI Hordeum vulgare subsp. v... 110 2e-034
gb|CB880227.1|CB880227 HM05O04w HM Hordeum vulgare subsp. v... 102 2e-034
gb|BE216646.1|BE216646 HV_CEb0011B08f Hordeum vulgare seedl... 119 2e-034
gb|BF627303.3|BF627303 HVSMEb0004I01f Hordeum vulgare seedl... 100 2e-034
gb|BI960706.1|BI960706 HVSMEn0001B07f Hordeum vulgare rachi... 138 4e-034
gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA li... 129 4e-034
gb|AU252315.1|AU252315 AU252315 salt-stressed barley root c... 101 6e-034
gb|AV916579.1|AV916579 AV916579 K. Sato unpublished cDNA li... 63 2e-033
gb|BE195199.3|BE195199 HVSMEh0088J02f Hordeum vulgare 5-45 ... 67 4e-033
gb|BE519761.3|BE519761 HV_CEb0021C04f Hordeum vulgare seedl... 116 4e-033
gb|AV931728.1|AV931728 AV931728 K. Sato unpublished cDNA li... 98 4e-033
gb|BI955765.1|BI955765 HVSMEm0024G17f Hordeum vulgare green... 118 7e-033
gb|BI957225.1|BI957225 HVSMEn0008D16f Hordeum vulgare rachi... 118 9e-033
gb|CA016039.1|CA016039 HV10M21u HV Hordeum vulgare subsp. v... 99 9e-033
gb|AV919113.1|AV919113 AV919113 K. Sato unpublished cDNA li... 95 1e-032
gb|AV917809.1|AV917809 AV917809 K. Sato unpublished cDNA li... 95 1e-032
gb|BF624750.2|BF624750 HVSMEa0017K07f Hordeum vulgare seedl... 140 3e-032
gb|BM817083.1|BM817083 HC01F04_T3.ab1 HC Hordeum vulgare su... 139 4e-032
gb|BQ664209.1|BQ664209 HV02F12u HV Hordeum vulgare subsp. v... 139 4e-032
gb|AV919240.1|AV919240 AV919240 K. Sato unpublished cDNA li... 93 5e-032
gb|AV922497.1|AV922497 AV922497 K. Sato unpublished cDNA li... 93 5e-032
gb|BI956493.1|BI956493 HVSMEn0003M04f Hordeum vulgare rachi... 136 5e-031
gb|BG365432.1|BG365432 HVSMEi0002K17f Hordeum vulgare 20 DA... 104 6e-031
gb|BM443957.2|BM443957 EBem09_SQ002_E09_R embryo, 1 Day ger... 123 6e-031
gb|CA028447.1|CA028447 HZ61P23r HZ Hordeum vulgare subsp. v... 135 9e-031
gb|BQ767330.1|BQ767330 EBro08_SQ008_H18_R root, 3 week, dro... 133 3e-030
gb|AU252324.1|AU252324 AU252324 salt-stressed barley root c... 70 7e-030
gb|CA025677.1|CA025677 HZ52M20r HZ Hordeum vulgare subsp. v... 99 1e-029
gb|BF260290.3|BF260290 HVSMEf0021J18f Hordeum vulgare seedl... 127 1e-029
gb|AL504160.1|AL504160 AL504160 Hordeum vulgare Barke roots... 72 2e-029
gb|BJ464550.1|BJ464550 BJ464550 K. Sato unpublished cDNA li... 94 3e-029
gb|BJ547848.1|BJ547848 BJ547848 K. Sato unpublished cDNA li... 117 5e-029
gb|CA019349.1|CA019349 HV11L11r HV Hordeum vulgare subsp. v... 129 5e-029
gb|AV912967.1|AV912967 AV912967 K. Sato unpublished cDNA li... 89 5e-029
gb|AV929028.1|AV929028 AV929028 K. Sato unpublished cDNA li... 128 1e-028
gb|CA009374.1|CA009374 HU13P05r HU Hordeum vulgare subsp. v... 66 2e-028
gb|BQ758724.1|BQ758724 EBma07_SQ002_J15_R maternal, 21 DPA,... 101 2e-028
gb|AV917240.1|AV917240 AV917240 K. Sato unpublished cDNA li... 79 6e-028
gb|AV922407.1|AV922407 AV922407 K. Sato unpublished cDNA li... 79 6e-028
gb|BF628382.2|BF628382 HVSMEb0003O04f Hordeum vulgare seedl... 124 1e-027
gb|BI779253.2|BI779253 EBro01_SQ003_H11_R root, 3 week, hyd... 124 1e-027
gb|CA005397.1|CA005397 HU10K20u HU Hordeum vulgare subsp. v... 99 2e-027
gb|BQ461073.1|BQ461073 HE01E18r HE Hordeum vulgare subsp. v... 109 2e-027
gb|CA029164.1|CA029164 HZ64G11r HZ Hordeum vulgare subsp. v... 91 2e-027
gb|AV917724.1|AV917724 AV917724 K. Sato unpublished cDNA li... 77 3e-027
gb|BF631513.2|BF631513 HVSMEb0016D19f Hordeum vulgare seedl... 121 3e-027
gb|AV833831.1|AV833831 AV833831 K. Sato unpublished cDNA li... 122 6e-027
gb|AV928038.1|AV928038 AV928038 K. Sato unpublished cDNA li... 76 1e-026
gb|BI777730.2|BI777730 EBro08_SQ001_K12_R root, 3 week, dro... 88 2e-026
gb|AU252316.1|AU252316 AU252316 salt-stressed barley root c... 76 4e-026
gb|CA016903.1|CA016903 HV05M12u HV Hordeum vulgare subsp. v... 66 4e-026
gb|AL500947.1|AL500947 AL500947 Hordeum vulgare Barke roots... 119 6e-026
gb|AU252310.1|AU252310 AU252310 salt-stressed barley root c... 90 6e-026
gb|CA025894.1|CA025894 HZ53H05r HZ Hordeum vulgare subsp. v... 118 8e-026
gb|BJ475646.1|BJ475646 BJ475646 K. Sato unpublished cDNA li... 78 4e-025
gb|BM101180.2|BM101180 EBpi01_SQ003_C01_R pistil, 1 DPA, no... 69 4e-025
gb|BF624213.1|BF624213 HVSMEa0012L22f Hordeum vulgare seedl... 74 4e-025
gb|AV918105.1|AV918105 AV918105 K. Sato unpublished cDNA li... 63 8e-025
gb|CA018612.1|CA018612 HV09C09r HV Hordeum vulgare subsp. v... 76 1e-024
gb|BF066135.3|BF066135 HV_CEb0014P04f Hordeum vulgare seedl... 56 1e-024
gb|BE519743.1|BE519743 HV_CEb0021A21f Hordeum vulgare seedl... 69 2e-024
gb|BF254550.2|BF254550 HVSMEf0004F12f Hordeum vulgare seedl... 113 3e-024
gb|BF253916.1|BF253916 HVSMEf0002H19f Hordeum vulgare seedl... 104 3e-024
gb|BI948978.1|BI948978 HVSMEl0011O14f Hordeum vulgare spike... 100 4e-024
gb|BF627063.2|BF627063 HVSMEb0002G10f Hordeum vulgare seedl... 87 4e-024
gb|AJ436646.1|AJ436646 AJ436646 S00002 Hordeum vulgare subs... 80 4e-024
gb|AV922603.1|AV922603 AV922603 K. Sato unpublished cDNA li... 80 4e-024
gb|AV921527.1|AV921527 AV921527 K. Sato unpublished cDNA li... 80 4e-024
gb|BQ458589.1|BQ458589 HA04M20r HA Hordeum vulgare subsp. v... 90 5e-024
gb|BJ466231.1|BJ466231 BJ466231 K. Sato unpublished cDNA li... 67 5e-024
gb|BQ470705.1|BQ470705 HX03M12r HX Hordeum vulgare subsp. v... 112 7e-024
gb|CA012057.1|CA012057 HT04F04r HT Hordeum vulgare subsp. v... 78 1e-023
gb|BJ547119.1|BJ547119 BJ547119 K. Sato unpublished cDNA li... 111 2e-023
gb|BQ664275.1|BQ664275 HV02K08u HV Hordeum vulgare subsp. v... 65 2e-023
gb|BQ664118.1|BQ664118 HV01P03w HV Hordeum vulgare subsp. v... 67 3e-023
gb|BJ465891.1|BJ465891 BJ465891 K. Sato unpublished cDNA li... 77 3e-023
gb|BJ467535.1|BJ467535 BJ467535 K. Sato unpublished cDNA li... 77 3e-023
gb|AV913914.1|AV913914 AV913914 K. Sato unpublished cDNA li... 109 5e-023
gb|BM371202.2|BM371202 EBro04_SQ003_N08_R root, 3 week, sal... 82 9e-023
gb|AV918924.1|AV918924 AV918924 K. Sato unpublished cDNA li... 67 9e-023
gb|BJ465805.1|BJ465805 BJ465805 K. Sato unpublished cDNA li... 67 9e-023
gb|AV913057.1|AV913057 AV913057 K. Sato unpublished cDNA li... 105 6e-022
gb|CA011333.1|CA011333 HT06E05u HT Hordeum vulgare subsp. v... 91 8e-022
gb|AV923900.1|AV923900 AV923900 K. Sato unpublished cDNA li... 67 2e-021
gb|BE214174.2|BE214174 HV_CEb0002I14f Hordeum vulgare seedl... 74 5e-021
gb|BG301293.2|BG301293 HVSMEb0020I08f Hordeum vulgare seedl... 83 7e-021
gb|BG299722.1|BG299722 HVSMEa0021I20f Hordeum vulgare seedl... 83 9e-021
gb|BE195103.3|BE195103 HVSMEh0088E21f Hordeum vulgare 5-45 ... 83 9e-021
>gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0019N18f, mRNA sequence
Length = 925
Score = 108 bits (230), Expect(5) = 1e-078
Identities = 42/89 (47%), Positives = 63/89 (70%)
Frame = -1 / +3
Query: 1188 ALDMTELLGGYASDFVCRAVLGESHRKQGRNKLFRELTETSAALLGGFNVEDYFPKLADV 1009
ALD+ ELL ++++ V AV G+S R++G KLFREL ET++ L+GGFNV DYFP+L +
Sbjct: 3 ALDLGELLSAFSTNIVGHAVCGKSFRQKGHEKLFRELVETNSLLIGGFNVGDYFPELLKL 182
Query: 1008 DLFLRIICAKAKGVSKRWDSLFNELLSEY 922
D+ ++C +A+ V+K WD L L+ E+
Sbjct: 183 DIIRWMVCGRARRVNKMWDDLLESLIHEH 269
Score = 91.8 bits (194), Expect(5) = 1e-078
Identities = 35/54 (64%), Positives = 44/54 (81%)
Frame = -1 / +3
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIV 517
MV E+DL+ + YLKA IKE++R+H PAP L+PH + DC INGYTIP+GTRVIV
Sbjct: 513 MVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIV 674
Score = 89.5 bits (189), Expect(5) = 1e-078
Identities = 35/74 (47%), Positives = 54/74 (72%)
Frame = -1 / +3
Query: 882 DFVHLLLSLQKDYGLTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEV 703
D++H LLS+QK+Y LT + +K LV MF A +TS++V+EY+M+ LM N ++ KLQ EV
Sbjct: 306 DYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEV 485
Query: 702 RTATPDGRMVMEED 661
R++ P G+ ++ ED
Sbjct: 486 RSSIPKGKHMVTED 527
Score = 71.6 bits (150), Expect(5) = 7e-050
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +1 / -3
Query: 943 EEAVPPLADALGLGADDPEEQVHVRQLREVVLHVEPAQEGGAGLRQLPEQLVPALLPVGL 1122
E+ VP L + G A+ P + V ++QLREVV HVE A E G GL QLPE+L+ A LP GL
Sbjct: 248 EQVVPHLVHSPGPAANHPPDDVQLQQLREVVPHVEAANEQGVGLHQLPEELLVAFLPEGL 69
Score = 65.7 bits (137), Expect(5) = 7e-050
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +1 / -3
Query: 661 VLLHHHAAVGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CLDGCFEHVHKYALDVIRGE 840
VL H +G PHL L LG +V V+H+ +HGV H *C+ +H H+ + D++ E
Sbjct: 527 VLCDHVFPLGYATPHLGL*LGHEVGVLHEPSHGVFHHYV*CVRASSKHDHQLSFDLLPCE 348
Query: 841 TVVFLQRQQEVHEV 882
V+FL R+Q V V
Sbjct: 347 VVLFLNRKQVVDVV 306
Score = 63.4 bits (132), Expect(5) = 7e-050
Identities = 32/55 (58%), Positives = 39/55 (70%)
Frame = +2 / -1
Query: 515 LTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRYGIRLRSSSITM 679
LTMTRVP GMV*P ++QS + + G R+GAG R SL+ AFR LRSSS+TM
Sbjct: 676 LTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLITAFR*ARWLRSSSVTM 512
Score = 45.5 bits (93), Expect(5) = 1e-078
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -1 / +3
Query: 396 FVPFGAGRRICAGATFAIATVEIMLANLIYHFDWE 292
++PFG GRR C G IA + IML NL Y F E
Sbjct: 798 YLPFGTGRRYCPGINLRIAAIGIMLTNLGYQFPLE 902
Score = 40.5 bits (82), Expect(5) = 7e-050
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +2 / -1
Query: 290 ISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLP 412
+S W* R SMI AM P Q LRP P G + +P
Sbjct: 904 VSSGNW*PRLVSMIPMAAMRRFIPGQYLRPVPKGR*KEXVP 782
Score = 35.4 bits (71), Expect(5) = 1e-078
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1 / +2
Query: 492 PTCWDKAEEFFPERFLEQGRDAEVDMYG 409
P W+ AEE PERF++ G A +D G
Sbjct: 701 PANWESAEEVLPERFMQGGMAAAMDYKG 784
Score = 31.8 bits (63), Expect(5) = 7e-050
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2 / -2
Query: 398 RMSLPYMSTSASRPCSRKRSGKNSSALSQHVG 493
R P S +A+ P KRSG+ SSALSQ G
Sbjct: 795 RXPFPL*SMAAAIPPCMKRSGRTSSALSQLAG 700
>gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0006N15f, mRNA sequence
Length = 710
Score = 205 bits (442), Expect(3) = 4e-076
Identities = 77/131 (58%), Positives = 98/131 (74%)
Frame = -1 / +2
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
MV E+DL+ + YLKA IKE++R+H PAP L+PH + DC INGYTIP+GTRVIVN+ A+A
Sbjct: 317 MVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIA 496
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP W+ AEEF PERF++ G A +D G ++PFG GRRIC G AI +EIML
Sbjct: 497 RDPNSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINLAIGAIEIMLT 676
Query: 318 NLIYHFDWEMP 286
NL+YHFDW++P
Sbjct: 677 NLVYHFDWKLP 709
Score = 143 bits (306), Expect(2) = 8e-047
Identities = 73/131 (55%), Positives = 84/131 (64%)
Frame = +2 / -3
Query: 287 GISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKN 466
G QSKW R SMIS MA P ILRP PNG R P S +A+ P KRSG+N
Sbjct: 708 GSFQSKWYTRLVSMISMAPMARFIPGHILRPVPNGR*RKPFPL*SMAAALPPCMKRSGRN 529
Query: 467 SSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRY 646
SSALSQ +GSLA A LTMTRVP GMV*P ++QS + + G R+GAG R SL+ AFR
Sbjct: 528 SSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLITAFR* 349
Query: 647 GIRLRSSSITM 679
LRSSS+TM
Sbjct: 348 ARWLRSSSVTM 316
Score = 89.5 bits (189), Expect(3) = 4e-076
Identities = 35/74 (47%), Positives = 54/74 (72%)
Frame = -1 / +2
Query: 882 DFVHLLLSLQKDYGLTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEV 703
D++H LLS+QK+Y LT + +K LV MF A +TS++V+EY+M+ LM N ++ KLQ EV
Sbjct: 110 DYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEV 289
Query: 702 RTATPDGRMVMEED 661
R++ P G+ ++ ED
Sbjct: 290 RSSIPKGKHMVTED 331
Score = 65.7 bits (137), Expect(2) = 8e-047
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +1 / -2
Query: 661 VLLHHHAAVGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CLDGCFEHVHKYALDVIRGE 840
VL H +G PHL L LG +V V+H+ +HGV H *C+ +H H+ + D++ E
Sbjct: 331 VLCDHVFPLGYATPHLGL*LGHEVGVLHEPSHGVFHHYV*CVRASSKHDHQLSFDLLPCE 152
Query: 841 TVVFLQRQQEVHEV 882
V+FL R+Q V V
Sbjct: 151 VVLFLNRKQVVDVV 110
Score = 30.9 bits (61), Expect(3) = 4e-076
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1 / +2
Query: 993 IICAKAKGVSKRWDSLFNELLSEY 922
++C +A+ V+K WD L L+ E+
Sbjct: 2 MVCGRARRVNKMWDDLLESLIHEH 73
>gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB105E09_SK.ab1 similar to Steroid
17-alpha-monooxygenase,Unspecific monooxygenase, mRNA
sequence
Length = 884
Score = 209 bits (451), Expect(3) = 6e-074
Identities = 78/136 (57%), Positives = 104/136 (76%)
Frame = -1 / +2
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
+V E D+S+M YL+A IKES+R+HP AP L+PH + D I+GY +PAGT V++N WA+
Sbjct: 254 VVTEADISKMTYLRAVIKESLRLHPVAPLLVPHLAMIDGNIDGYMVPAGTHVLINVWAIG 433
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RD + W++AEEF PERFL++G A V+ G D +F+PFGAGRR+C G IATVE+MLA
Sbjct: 434 RDSSYWEEAEEFIPERFLDEGSAAGVNFKGNDFQFLPFGAGRRMCPGINLGIATVELMLA 613
Query: 318 NLIYHFDWEMPAEMER 271
NL+YHFDWE+P +ER
Sbjct: 614 NLMYHFDWELPLGVER 661
Score = 135 bits (289), Expect(2) = 1e-035
Identities = 67/134 (50%), Positives = 81/134 (60%)
Frame = +2 / -3
Query: 275 SISAGISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKR 454
S +G SQSKW ++FA++ STVA+ P ILRPAPNG N S P T A+ P SR
Sbjct: 657 STPSGNSQSKWYIKFANISSTVAIPRFIPGHILRPAPNGKNWKSFPLKLTPAALPSSRNL 478
Query: 455 SGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMV 634
SG NSSA SQ + SL AH L T VPAG + P + S + +CG GA G R DS M
Sbjct: 477 SGMNSSASSQ*LESLPMAHTLIKTCVPAGTMYPSMLPSIIARCGTSKGATG*SRSDSFMT 298
Query: 635 AFRYGIRLRSSSIT 676
A RY I L S+S+T
Sbjct: 297 ALRYVILLMSASVT 256
Score = 75.3 bits (158), Expect(3) = 6e-074
Identities = 31/78 (39%), Positives = 53/78 (67%)
Frame = -1 / +2
Query: 897 DHNSEDFVHLLLSLQKDYGLTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAK 718
D +FV +LLS+Q +YGLT +++K +L ++F + ETS LE++++EL+ + ++ K
Sbjct: 32 DRTGGNFVDILLSVQMEYGLTKEDMKALLTDVFFGSTETSSNTLEFTLAELVRSPCLIGK 211
Query: 717 LQKEVRTATPDGRMVMEE 664
LQ EVR+ P G+ V+ E
Sbjct: 212 LQDEVRSIVPSGQEVVTE 265
Score = 36.3 bits (73), Expect(2) = 1e-035
Identities = 25/75 (33%), Positives = 33/75 (44%)
Frame = +2 / -3
Query: 656 LRSSSITMRPSGVAVLTSFWSLARTWRLFISSLMEYSSTRNDVSMAASNMFTSMPLMLSV 835
+ +S T P G +LTS S L SS S +DVS+ N M S
Sbjct: 273 MSASVTTSCPLGTILLTSSCSFPIKHGLLTSSAKVNSRVLDDVSVEPKNTSVRRAFMSSF 94
Query: 836 VRP*SFCSDSKRCTK 880
VRP S +D++ TK
Sbjct: 93 VRPYSI*TDNRISTK 49
Score = 33.6 bits (67), Expect(3) = 6e-074
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = -1 / +2
Query: 258 VDMSDQFGMTLRRTQKLYLVPR 193
++M++ FG+T+RR +KL LVP+
Sbjct: 668 INMTELFGLTMRRKEKLMLVPK 733
>gb|BF627742.1|BF627742 HVSMEb0005K21f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0005K21f, mRNA sequence
Length = 818
Score = 177 bits (380), Expect(2) = 5e-073
Identities = 70/113 (61%), Positives = 88/113 (77%)
Frame = -1 / +3
Query: 1605 PTPPGKLPIIGHLHLIGSHPHVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLR 1426
P+P +LP+IGHLH +G PHVS R L A++G +GLMLV++GAVPT+VVSTP AA+AVLR
Sbjct: 129 PSPGWRLPVIGHLHQVGPLPHVSLRHLAAEHGRDGLMLVRLGAVPTLVVSTPAAAQAVLR 308
Query: 1425 THDHVLASRPRNPVADIIRYNCTDVAFAPYGEYWRTARKVVNTHLLSAKMVFS 1267
THDHV ASRP +PVA I+ Y DV FAPYG +WR +K+ THLL+A+ V S
Sbjct: 309 THDHVFASRPHSPVAHILFYGSADVVFAPYGHHWRQVKKISTTHLLTARKVHS 467
Score = 122 bits (260), Expect(2) = 7e-038
Identities = 62/113 (54%), Positives = 72/113 (63%)
Frame = +2 / -2
Query: 1268 EKTILALSRCVLTTFRAVRQYSPYGAKATSVQL*RMMSATGFRGRDASTWSCVRSTASAA 1447
E T LA+SR V+ F RQ+ P GAK TS + *+ M ATG G DA+TWSCVRSTA AA
Sbjct: 466 EWTFLAVSRWVVEIFLTWRQWWP*GAKTTSAEP*KRMWATGEWGLDANTWSCVRSTACAA 287
Query: 1448 CGVDTTMVGTAPTCTSISPLWPYLAWRSRKETCGWEPMRWRCPMMGSFPGGVG 1606
GV+TT VGTAP TS+ P P A R R+ETCG P R P+ GS G G
Sbjct: 286 AGVETTSVGTAPRRTSMRPSRPCSAARWRRETCGRGPTWCRWPITGSRQPGEG 128
Score = 119 bits (254), Expect(2) = 5e-073
Identities = 46/92 (50%), Positives = 66/92 (71%)
Frame = -1 / +3
Query: 1194 GTALDMTELLGGYASDFVCRAVLGESHRKQGRNKLFRELTETSAALLGGFNVEDYFPKLA 1015
G ALDM+ELL + D VC AV G S R++G + FREL E +A+L+GGFN+ED+FP L
Sbjct: 534 GVALDMSELLNAFVFDIVCHAVAGNSFRERGTQQHFRELVEANASLIGGFNLEDHFPALV 713
Query: 1014 DVDLFLRIICAKAKGVSKRWDSLFNELLSEYA 919
+++F I+CAKA+ V+K+W L + L+ E+A
Sbjct: 714 KLEIFRXIVCAKARRVNKQWGRLLDRLIDEHA 809
Score = 60.6 bits (126), Expect(2) = 7e-038
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +1 / -1
Query: 913 GERVLGQQLVEEAVPPLADALGLGADDPEEQVHVRQLREVVLHVEPAQEGGAGLRQLPEQ 1092
G R+ + +E++ P + GLGA++ E + Q REVVL VE A E G GL QLPE
Sbjct: 815 GGRMFIDEPIEQSSPLFVYSPGLGANNXSEDFQLHQCREVVLQVEAADERGVGLHQLPEV 636
Query: 1093 LVPALLP 1113
L+ LP
Sbjct: 635 LLSPSLP 615
>gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33l17 5', mRNA sequence
Length = 689
Score = 173 bits (373), Expect(2) = 6e-070
Identities = 64/120 (53%), Positives = 86/120 (71%)
Frame = -1 / +2
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+ P AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 329 IISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 508
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ EEF PERF ++G ++ G D +F+PFGAGRR+C G IA VE+MLA
Sbjct: 509 RDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLA 688
Score = 116 bits (247), Expect(2) = 6e-034
Identities = 58/118 (49%), Positives = 67/118 (56%)
Frame = +2 / -3
Query: 320 ASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKNSSALSQHVGSL 499
A++ ST A+ P ILRPAPNG N S P P S SG NSS SQ +GSL
Sbjct: 687 ANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMNSSGYSQELGSL 508
Query: 500 ASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRYGIRLRSSSI 673
AHALT TRVPAG + P + QS + +CG R GA G R DS M A RY I S S+
Sbjct: 507 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRYVILFMSVSL 334
Score = 112 bits (239), Expect(2) = 6e-070
Identities = 43/111 (38%), Positives = 73/111 (65%)
Frame = -1 / +2
Query: 996 RIICAKAKGVSKRWDSLFNELLSEYALSGGKQGDHNSEDFVHLLLSLQKDYGLTTDNIKG 817
+ +CAKAK V RW L ++++ ++ DH +DFV ++LS+Q++Y LT +++K
Sbjct: 8 KAVCAKAKRVRNRWADLLDQVIDDHVSKRKLASDHKDDDFVDIMLSVQQEYALTREHMKA 187
Query: 816 ILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEE 664
+L ++F AI+TS VLE++++ELM H++ KLQ EVR P G+ ++ E
Sbjct: 188 LLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVRGIVPQGQEIISE 340
Score = 49.6 bits (102), Expect(2) = 6e-034
Identities = 25/103 (24%), Positives = 52/103 (50%)
Frame = +1 / -2
Query: 682 AVGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CLDGCFEHVHKYALDVIRGETVVFLQR 861
++G PHL+L L V H+L+ G + *C+ + + + + V+ E+++ L R
Sbjct: 322 SLGYNTPHLIL*LFHHVWPPHELSQGEFKDVS*CVYRTKKDICEESFHVLSCESILLLDR 143
Query: 862 QQEVHEVFRVVVALLAAGERVLGQQLVEEAVPPLADALGLGAD 990
+H++ +V+ ++ LV++ PP+ + GLG +
Sbjct: 142 *HNIHKIVILVIRR*LPLAHMIVDHLVQQIRPPVPHSFGLGTN 14
>gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5k12 3', mRNA sequence
Length = 774
Score = 203 bits (438), Expect(3) = 7e-070
Identities = 74/136 (54%), Positives = 99/136 (72%)
Frame = -1 / -3
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+HP AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 598 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 419
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ EEF PERF ++G ++ G D +F+PFGAGRR+C G IA VE+MLA
Sbjct: 418 RDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLA 239
Query: 318 NLIYHFDWEMPAEMER 271
NL+ HFDWE+P + R
Sbjct: 238 NLVCHFDWELPLGVGR 191
Score = 134 bits (287), Expect(2) = 1e-032
Identities = 66/129 (51%), Positives = 75/129 (58%)
Frame = +2 / +3
Query: 287 GISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKN 466
G SQSKW RFA++ ST A+ P ILRPAPNG N S P P S SG N
Sbjct: 207 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 386
Query: 467 SSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRY 646
SS SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R DS M A RY
Sbjct: 387 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 566
Query: 647 GIRLRSSSI 673
I S S+
Sbjct: 567 VILFMSVSL 593
Score = 65.7 bits (137), Expect(3) = 7e-070
Identities = 26/62 (41%), Positives = 43/62 (69%)
Frame = -1 / -3
Query: 849 DYGLTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVM 670
+Y LT +++K +L ++F AI+TS VLE++++ELM H++ KLQ EVR P G+ ++
Sbjct: 772 EYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVRGILPQGQEII 593
Query: 669 EE 664
E
Sbjct: 592 SE 587
Score = 35.4 bits (71), Expect(3) = 7e-070
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = -1 / -3
Query: 258 VDMSDQFGMTLRRTQKLYLVPR 193
+DM++ FG+T+RR +KL LVP+
Sbjct: 184 IDMTEVFGLTVRRKEKLLLVPK 119
Score = 27.2 bits (53), Expect(2) = 1e-032
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +2 / +3
Query: 665 SSITMRPSGVAVLTSFWSLARTWRLFISSLMEYSSTRNDVSMAASNMFTSMPLMLSVVR 841
S I P G LTS S + L +SS S T DVS+A M S+VR
Sbjct: 588 SLIISCPWGKIPLTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVR 764
>gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 3', mRNA sequence
Length = 746
Score = 213 bits (460), Expect(3) = 3e-069
Identities = 82/144 (56%), Positives = 106/144 (73%)
Frame = -1 / -1
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
MV+E+DL+ + YLKA IKE++R+H PAP L+PH + DC INGYTIP+GTRVIVN+ A+A
Sbjct: 620 MVIEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIA 441
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ AEEF PERF++ G A +D G ++PFG GRRIC G FAIA +EIMLA
Sbjct: 440 RDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLA 261
Query: 318 NLIYHFDWEMPAEMERTGAKVDMS 247
NL+YHFDW++P G + S
Sbjct: 260 NLVYHFDWKLPPGSAERGISMTES 189
Score = 150 bits (323), Expect(2) = 1e-042
Identities = 79/145 (54%), Positives = 91/145 (62%)
Frame = +2 / +1
Query: 245 SDMSTLAPVRSISAGISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMST 424
+D L P + G QSKW R ASMIS AMA P ILRP PNG R P S
Sbjct: 187 NDSVILIPRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL*SM 366
Query: 425 SASRPCSRKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAG 604
+A+ P KRSG+NSSALSQ +GSLA A LTMTRVP GMV*P ++QS + + G R+GAG
Sbjct: 367 AAALPPCMKRSGRNSSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAG 546
Query: 605 GWMRMDSLMVAFRYGIRLRSSSITM 679
R SLM AFR LRSSS+TM
Sbjct: 547 M*SRSVSLMTAFR*ARWLRSSSMTM 621
Score = 55.1 bits (114), Expect(3) = 3e-069
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = -1 / -1
Query: 801 FEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEED 661
F A +TS++V+EY+M+ LM N ++ KLQ EVR++ P G+ ++ ED
Sbjct: 746 FXAGTDTSYIVMEYAMARLMQNPDLMTKLQAEVRSSIPKGKHMVIED 606
Score = 43.7 bits (89), Expect(2) = 1e-042
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +1 / +3
Query: 661 VLLHHHAAVGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CL 786
VL H +G PHL L LG +V V+H+ +HGV H *C+
Sbjct: 606 VLYDHVFPLGYATPHLGL*LGHEVGVLHEPSHGVFHHYV*CV 731
Score = 33.6 bits (67), Expect(3) = 3e-069
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1 / -1
Query: 258 VDMSDQFGMTLRRTQKLYLVPRIPK 184
+ M++ FG+T+ R KL LVP +P+
Sbjct: 206 ISMTESFGLTVHRKDKLLLVPLVPQ 132
>gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42e08 5', mRNA sequence
Length = 688
Score = 159 bits (342), Expect(2) = 7e-069
Identities = 57/107 (53%), Positives = 78/107 (72%)
Frame = -1 / +2
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+ P AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 359 IISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 538
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAG 358
RDP+ W+ EEF PERF ++G ++ G D +F+PFGAGRR+C G
Sbjct: 539 RDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPG 679
Score = 122 bits (262), Expect(2) = 7e-069
Identities = 48/123 (39%), Positives = 79/123 (64%)
Frame = -1 / +2
Query: 1032 YFPKLADVDLFLRIICAKAKGVSKRWDSLFNELLSEYALSGGKQGDHNSEDFVHLLLSLQ 853
YFP L V + + +CAKAK V RW L ++++ ++ DH +DFV ++LS+Q
Sbjct: 2 YFPALGRVGVLKKAVCAKAKRVRNRWADLLDQVIDDHVSKRKLASDHKDDDFVDIMLSVQ 181
Query: 852 KDYGLTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMV 673
++Y LT +++K +L ++F AI+TS VLE++++ELM H++ KLQ EVR P G+ +
Sbjct: 182 QEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVRGIVPQGQEI 361
Query: 672 MEE 664
+ E
Sbjct: 362 ISE 370
Score = 109 bits (233), Expect(2) = 2e-033
Identities = 54/105 (51%), Positives = 60/105 (57%)
Frame = +2 / -2
Query: 359 PAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKNSSALSQHVGSLASAHALTMTRVPA 538
P ILRPAPNG N S P P S SG NSS SQ +GSL AHALT TRVPA
Sbjct: 678 PGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMNSSGYSQELGSLPMAHALTTTRVPA 499
Query: 539 GMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRYGIRLRSSSI 673
G + P + QS + +CG R GA G R DS M A RY I S S+
Sbjct: 498 GTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRYVILFMSVSL 364
Score = 54.2 bits (112), Expect(2) = 2e-033
Identities = 29/117 (24%), Positives = 58/117 (49%)
Frame = +1 / -1
Query: 682 AVGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CLDGCFEHVHKYALDVIRGETVVFLQR 861
++G PHL+L L V H+L+ G + *C+ + + + + V+ E+++ L R
Sbjct: 352 SLGYNTPHLIL*LFHHVWPPHELSQGEFKDVS*CVYRTKKDICEESFHVLSCESILLLDR 173
Query: 862 QQEVHEVFRVVVALLAAGERVLGQQLVEEAVPPLADALGLGADDPEEQVHVRQLREV 1032
+H++ +V+ ++ LV++ PP+ + GLG + + + Q REV
Sbjct: 172 *HNIHKIVILVIRR*LPLAHMIVDHLVQQIRPPVPHSFGLGTNRLLKHTYSTQCREV 2
>gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33l17 3', mRNA sequence
Length = 689
Score = 199 bits (430), Expect(3) = 7e-067
Identities = 73/136 (53%), Positives = 98/136 (72%)
Frame = -1 / -1
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+ P AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 512 IISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 333
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ EEF PERF ++G ++ G D +F+PFGAGRR+C G IA VE+MLA
Sbjct: 332 RDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLA 153
Query: 318 NLIYHFDWEMPAEMER 271
NL+ HFDWE+P + R
Sbjct: 152 NLVCHFDWELPLGVGR 105
Score = 133 bits (286), Expect(2) = 7e-033
Identities = 66/129 (51%), Positives = 75/129 (58%)
Frame = +2 / +1
Query: 287 GISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKN 466
G SQSKW RFA++ ST A+ P ILRPAPNG N S P P S SG N
Sbjct: 121 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 300
Query: 467 SSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRY 646
SS SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R DS M A RY
Sbjct: 301 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRY 480
Query: 647 GIRLRSSSI 673
I S S+
Sbjct: 481 VILFMSVSL 507
Score = 66.6 bits (139), Expect(3) = 7e-067
Identities = 26/63 (41%), Positives = 44/63 (69%)
Frame = -1 / -1
Query: 852 KDYGLTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMV 673
++Y LT +++K +L ++F AI+TS VLE++++ELM H++ KLQ EVR P G+ +
Sbjct: 689 QEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVRGIVPQGQEI 510
Query: 672 MEE 664
+ E
Sbjct: 509 ISE 501
Score = 28.1 bits (55), Expect(3) = 7e-067
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = -1 / -1
Query: 258 VDMSDQFGMTLRRTQKL 208
+DM++ FG+T+RR +KL
Sbjct: 98 IDMTEVFGLTVRRKEKL 48
Score = 28.1 bits (55), Expect(2) = 7e-033
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +2 / +1
Query: 665 SSITMRPSGVAVLTSFWSLARTWRLFISSLMEYSSTRNDVSMAASNMFTSMPLMLSVVR 841
S I P G LTS S + L +SS S T DVS+A M S+VR
Sbjct: 502 SLIISCPWGTIPLTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVR 678
>gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 5', mRNA sequence
Length = 606
Score = 186 bits (400), Expect(2) = 2e-066
Identities = 72/122 (59%), Positives = 92/122 (75%)
Frame = -1 / +3
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
MV+E+DL+ + YLKA IKE++R+H PAP L+PH + DC INGYTIP+GTRVIVN+ A+A
Sbjct: 237 MVIEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIA 416
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ AEEF PERF++ G A +D G ++PFG GRRIC G F IA +EIML
Sbjct: 417 RDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFXIAXIEIMLX 596
Query: 318 NL 313
NL
Sbjct: 597 NL 602
Score = 134 bits (287), Expect(2) = 3e-044
Identities = 69/122 (56%), Positives = 79/122 (64%)
Frame = +2 / -3
Query: 314 RFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKNSSALSQHVG 493
R SMIS AM P ILRP PNG R P S +A+ P KRSG+NSSALSQ +G
Sbjct: 601 RLXSMISMXAMXKFXPGHILRPVPNGR*RKPFPL*SMAAALPPCMKRSGRNSSALSQLLG 422
Query: 494 SLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRYGIRLRSSSI 673
SLA A LTMTRVP GMV*P ++QS + + G R+GAG R SLM AFR LRSSS+
Sbjct: 421 SLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR*ARWLRSSSM 242
Query: 674 TM 679
TM
Sbjct: 241 TM 236
Score = 88.6 bits (187), Expect(2) = 2e-066
Identities = 35/74 (47%), Positives = 54/74 (72%)
Frame = -1 / +3
Query: 882 DFVHLLLSLQKDYGLTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEV 703
D++H LLS+QK+Y LT + +K LV MF A +TS++V+EY+M+ LM N ++ KLQ EV
Sbjct: 30 DYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEV 209
Query: 702 RTATPDGRMVMEED 661
R++ P G+ ++ ED
Sbjct: 210 RSSIPKGKHMVIED 251
Score = 65.7 bits (137), Expect(2) = 3e-044
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +1 / -2
Query: 661 VLLHHHAAVGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CLDGCFEHVHKYALDVIRGE 840
VL H +G PHL L LG +V V+H+ +HGV H *C+ +H H+ + D++ E
Sbjct: 251 VLYDHVFPLGYATPHLGL*LGHEVGVLHEPSHGVFHHYV*CVRASSKHDHQLSFDLLPCE 72
Query: 841 TVVFLQRQQEVHEV 882
V+FL R+Q V V
Sbjct: 71 VVLFLNRKQVVDVV 30
>gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. vulgare cDNA clone HB08M23
5-PRIME, mRNA sequence
Length = 624
Score = 183 bits (394), Expect(2) = 5e-066
Identities = 72/121 (59%), Positives = 91/121 (75%)
Frame = -1 / +2
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
MV E+DL+ + YLKA IKE++R+H PAP L+PH + DC INGYTIP+GTRVIVN+ A+A
Sbjct: 260 MVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCIINGYTIPSGTRVIVNSRAIA 439
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ AEEF PERF++ G A +D G ++PFG RRIC G FAIA +EIMLA
Sbjct: 440 RDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTXRRICPGINFAIAAIEIMLA 619
Query: 318 N 316
N
Sbjct: 620 N 622
Score = 132 bits (282), Expect(2) = 3e-043
Identities = 69/122 (56%), Positives = 79/122 (64%)
Frame = +2 / -1
Query: 314 RFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKNSSALSQHVG 493
R ASMIS AMA P ILR PNG R P S +A+ P KRSG+NSSALSQ +G
Sbjct: 624 RLASMISMAAMAKFIPGHILRXVPNGR*RKPFPL*SMAAALPPCMKRSGRNSSALSQLLG 445
Query: 494 SLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRYGIRLRSSSI 673
SLA A LTMTRVP GMV*P + QS + + G R+GAG R SL+ AFR LRSSS+
Sbjct: 444 SLAIARLLTMTRVPDGMV*PFMMQSAMARWGTRSGAGM*SRSVSLITAFR*ARWLRSSSV 265
Query: 674 TM 679
TM
Sbjct: 264 TM 259
Score = 89.5 bits (189), Expect(2) = 5e-066
Identities = 35/74 (47%), Positives = 54/74 (72%)
Frame = -1 / +2
Query: 882 DFVHLLLSLQKDYGLTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEV 703
D++H LLS+QK+Y LT + +K LV MF A +TS++V+EY+M+ LM N ++ KLQ EV
Sbjct: 53 DYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEV 232
Query: 702 RTATPDGRMVMEED 661
R++ P G+ ++ ED
Sbjct: 233 RSSIPKGKHMVTED 274
Score = 64.8 bits (135), Expect(2) = 3e-043
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = +1 / -3
Query: 661 VLLHHHAAVGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CLDGCFEHVHKYALDVIRGE 840
VL H +G PHL L LG +V V+H+ +HGV H *C+ +H H+ + D+ E
Sbjct: 274 VLCDHVFPLGYATPHLGL*LGHEVGVLHEPSHGVFHHYV*CVRASSKHDHQLSFDLFPCE 95
Query: 841 TVVFLQRQQEVHEV 882
V+FL R+Q V V
Sbjct: 94 VVLFLNRKQVVDVV 53
>gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 3', mRNA sequence
Length = 683
Score = 203 bits (438), Expect(3) = 3e-064
Identities = 74/136 (54%), Positives = 99/136 (72%)
Frame = -1 / -2
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+HP AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 568 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 389
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ EEF PERF ++G ++ G D +F+PFGAGRR+C G IA VE+MLA
Sbjct: 388 RDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLA 209
Query: 318 NLIYHFDWEMPAEMER 271
NL+ HFDWE+P + R
Sbjct: 208 NLVCHFDWELPLGVGR 161
Score = 134 bits (287), Expect(2) = 3e-032
Identities = 66/129 (51%), Positives = 75/129 (58%)
Frame = +2 / +3
Query: 287 GISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKN 466
G SQSKW RFA++ ST A+ P ILRPAPNG N S P P S SG N
Sbjct: 177 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 356
Query: 467 SSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRY 646
SS SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R DS M A RY
Sbjct: 357 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 536
Query: 647 GIRLRSSSI 673
I S S+
Sbjct: 537 VILFMSVSL 563
Score = 46.9 bits (96), Expect(3) = 3e-064
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = -1 / -2
Query: 789 IETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEE 664
I+TS VLE++++ELM H++ KLQ EVR P G+ ++ E
Sbjct: 682 IDTSANVLEFTLAELMRRPHMMEKLQDEVRGILPQGQEIISE 557
Score = 35.4 bits (71), Expect(3) = 3e-064
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = -1 / -2
Query: 258 VDMSDQFGMTLRRTQKLYLVPR 193
+DM++ FG+T+RR +KL LVP+
Sbjct: 154 IDMTEVFGLTVRRKEKLLLVPK 89
Score = 25.4 bits (49), Expect(2) = 3e-032
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1 / +2
Query: 682 AVGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CL 786
++G PHL+L L V H+L+ G + *C+
Sbjct: 575 SLG*NTPHLIL*LFHHVWPPHELSQGEFKDVS*CV 679
>gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22h15 3', mRNA sequence
Length = 640
Score = 203 bits (438), Expect(3) = 7e-064
Identities = 74/136 (54%), Positives = 99/136 (72%)
Frame = -1 / -1
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+HP AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 502 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 323
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ EEF PERF ++G ++ G D +F+PFGAGRR+C G IA VE+MLA
Sbjct: 322 RDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLA 143
Query: 318 NLIYHFDWEMPAEMER 271
NL+ HFDWE+P + R
Sbjct: 142 NLVCHFDWELPLGVGR 95
Score = 134 bits (287), Expect(2) = 3e-032
Identities = 66/129 (51%), Positives = 75/129 (58%)
Frame = +2 / +3
Query: 287 GISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKN 466
G SQSKW RFA++ ST A+ P ILRPAPNG N S P P S SG N
Sbjct: 111 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 290
Query: 467 SSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRY 646
SS SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R DS M A RY
Sbjct: 291 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 470
Query: 647 GIRLRSSSI 673
I S S+
Sbjct: 471 VILFMSVSL 497
Score = 52.8 bits (109), Expect(3) = 7e-064
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = -1 / -1
Query: 813 LVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEE 664
L ++F AI+TS VLE++++ELM H++ KLQ EVR P G+ ++ E
Sbjct: 640 LTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVRGILPQGQEIISE 491
Score = 28.1 bits (55), Expect(3) = 7e-064
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = -1 / -1
Query: 258 VDMSDQFGMTLRRTQKL 208
+DM++ FG+T+RR +KL
Sbjct: 88 IDMTEVFGLTVRRKEKL 38
Score = 25.4 bits (49), Expect(2) = 3e-032
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1 / +2
Query: 682 AVGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CL 786
++G PHL+L L V H+L+ G + *C+
Sbjct: 509 SLG*NTPHLIL*LFHHVWPPHELSQGEFKDVS*CV 613
>gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15n22 3', mRNA sequence
Length = 684
Score = 203 bits (438), Expect(3) = 1e-063
Identities = 74/136 (54%), Positives = 99/136 (72%)
Frame = -1 / -3
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+HP AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 568 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 389
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ EEF PERF ++G ++ G D +F+PFGAGRR+C G IA VE+MLA
Sbjct: 388 RDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLA 209
Query: 318 NLIYHFDWEMPAEMER 271
NL+ HFDWE+P + R
Sbjct: 208 NLVCHFDWELPLGVGR 161
Score = 134 bits (287), Expect(2) = 6e-032
Identities = 66/129 (51%), Positives = 75/129 (58%)
Frame = +2 / +3
Query: 287 GISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKN 466
G SQSKW RFA++ ST A+ P ILRPAPNG N S P P S SG N
Sbjct: 177 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 356
Query: 467 SSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRY 646
SS SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R DS M A RY
Sbjct: 357 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 536
Query: 647 GIRLRSSSI 673
I S S+
Sbjct: 537 VILFMSVSL 563
Score = 44.6 bits (91), Expect(3) = 1e-063
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = -1 / -3
Query: 789 IETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEE 664
I+TS V E++++ELM H++ KLQ EVR P G+ ++ E
Sbjct: 682 IDTSANVXEFTLAELMRRPHMMEKLQDEVRGILPQGQEIISE 557
Score = 35.4 bits (71), Expect(3) = 1e-063
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = -1 / -3
Query: 258 VDMSDQFGMTLRRTQKLYLVPR 193
+DM++ FG+T+RR +KL LVP+
Sbjct: 154 IDMTEVFGLTVRRKEKLLLVPK 89
Score = 24.4 bits (47), Expect(2) = 6e-032
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1 / +2
Query: 682 AVGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CL 786
++G PHL+L L V H+L+ G *C+
Sbjct: 575 SLG*NTPHLIL*LFHHVWPPHELSQGEFXDVS*CV 679
>gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34j09 3', mRNA sequence
Length = 719
Score = 205 bits (443), Expect(2) = 2e-063
Identities = 74/137 (54%), Positives = 100/137 (72%)
Frame = -1 / -3
Query: 675 VMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALAR 496
V ++DL +PYLKA IKE++R+H P P ++PH S +C INGYTIP+GTR +N +A+ R
Sbjct: 567 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 388
Query: 495 DPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLAN 316
DP+ W+ EEF PERF+E G A +D G D ++ PFG+GRRIC G FA AT+++ML N
Sbjct: 387 DPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTN 208
Query: 315 LIYHFDWEMPAEMERTG 265
L+YHFDW++P E E G
Sbjct: 207 LMYHFDWKLPPESEEEG 157
Score = 120 bits (257), Expect(2) = 1e-033
Identities = 67/138 (48%), Positives = 80/138 (57%)
Frame = +2 / +2
Query: 266 PVRSISAGISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCS 445
P S S G QSKW MRF SM VA+A + P ILRP PNG S P S +A+ P S
Sbjct: 158 PSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPPS 337
Query: 446 RKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDS 625
RSG NSS LSQ +GSL A L RVP G+V*P + S +E+ G +G G R S
Sbjct: 338 MNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVS 517
Query: 626 LMVAFRYGIRLRSSSITM 679
L+ AFR G RSS +T+
Sbjct: 518 LITAFR*GRPWRSSWVTV 571
Score = 58.3 bits (121), Expect(2) = 2e-063
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = -1 / -3
Query: 822 KGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEED 661
K L+ MFEA +TS +VLEY+M LM N V+A LQ EVR+ P G+ + +D
Sbjct: 717 KAQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQD 556
Score = 44.1 bits (90), Expect(2) = 1e-033
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +2 / +2
Query: 683 PSGVAVLTSFWSLARTWRLFISSLMEYSSTRNDVSMAASNMFTS 814
P G+ +LTS S+A T IS M YSST DVS+ ASNM ++
Sbjct: 578 PLGMVLLTSACSMAMTRGFCISRTMAYSSTMVDVSVPASNMISN 709
>gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11k15 3', mRNA sequence
Length = 707
Score = 203 bits (438), Expect(3) = 8e-062
Identities = 74/136 (54%), Positives = 99/136 (72%)
Frame = -1 / -2
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+HP AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 589 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 410
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ EEF PERF ++G ++ G D +F+PFGAGRR+C G IA VE+MLA
Sbjct: 409 RDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLA 230
Query: 318 NLIYHFDWEMPAEMER 271
NL+ HFDWE+P + R
Sbjct: 229 NLVCHFDWELPLGVGR 182
Score = 134 bits (287), Expect(2) = 3e-031
Identities = 66/129 (51%), Positives = 75/129 (58%)
Frame = +2 / +3
Query: 287 GISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKN 466
G SQSKW RFA++ ST A+ P ILRPAPNG N S P P S SG N
Sbjct: 198 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 377
Query: 467 SSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRY 646
SS SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R DS M A RY
Sbjct: 378 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 557
Query: 647 GIRLRSSSI 673
I S S+
Sbjct: 558 VILFMSVSL 584
Score = 38.6 bits (78), Expect(3) = 8e-062
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = -1 / -2
Query: 765 EYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEE 664
E++++ELM H++ KLQ EVR P G+ ++ E
Sbjct: 679 EFTLAELMRRPHMMEKLQDEVRGILPQGQEIISE 578
Score = 35.4 bits (71), Expect(3) = 8e-062
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = -1 / -2
Query: 258 VDMSDQFGMTLRRTQKLYLVPR 193
+DM++ FG+T+RR +KL LVP+
Sbjct: 175 IDMTEVFGLTVRRKEKLLLVPK 110
Score = 22.1 bits (42), Expect(2) = 3e-031
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1 / +2
Query: 682 AVGRRRPHLLLELGQDVAVVHQLAHG 759
++G PHL+L L V H+L+ G
Sbjct: 596 SLG*NTPHLIL*LFHHVWPPHELSQG 673
>gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16j19 3', mRNA sequence
Length = 669
Score = 203 bits (438), Expect(3) = 3e-060
Identities = 74/136 (54%), Positives = 99/136 (72%)
Frame = -1 / -2
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+HP AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 590 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 411
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ EEF PERF ++G ++ G D +F+PFGAGRR+C G IA VE+MLA
Sbjct: 410 RDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLA 231
Query: 318 NLIYHFDWEMPAEMER 271
NL+ HFDWE+P + R
Sbjct: 230 NLVCHFDWELPLGVGR 183
Score = 134 bits (287), Expect = 2e-030
Identities = 66/129 (51%), Positives = 75/129 (58%)
Frame = +2 / +1
Query: 287 GISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKN 466
G SQSKW RFA++ ST A+ P ILRPAPNG N S P P S SG N
Sbjct: 199 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 378
Query: 467 SSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRY 646
SS SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R DS M A RY
Sbjct: 379 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 558
Query: 647 GIRLRSSSI 673
I S S+
Sbjct: 559 VILFMSVSL 585
Score = 35.4 bits (71), Expect(3) = 3e-060
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = -1 / -2
Query: 258 VDMSDQFGMTLRRTQKLYLVPR 193
+DM++ FG+T+RR +KL LVP+
Sbjct: 176 IDMTEVFGLTVRRKEKLLLVPK 111
Score = 33.6 bits (67), Expect(3) = 3e-060
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1 / -2
Query: 753 SELMNNRHVLAKLQKEVRTATPDGRMVMEE 664
+ELM H++ KLQ EVR P G+ ++ E
Sbjct: 668 AELMRRPHMMEKLQDEVRGILPQGQEIISE 579
>gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 3', mRNA sequence
Length = 668
Score = 203 bits (438), Expect(3) = 3e-060
Identities = 74/136 (54%), Positives = 99/136 (72%)
Frame = -1 / -1
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+HP AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 590 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 411
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ EEF PERF ++G ++ G D +F+PFGAGRR+C G IA VE+MLA
Sbjct: 410 RDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLA 231
Query: 318 NLIYHFDWEMPAEMER 271
NL+ HFDWE+P + R
Sbjct: 230 NLVCHFDWELPLGVGR 183
Score = 134 bits (287), Expect = 2e-030
Identities = 66/129 (51%), Positives = 75/129 (58%)
Frame = +2 / +1
Query: 287 GISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKN 466
G SQSKW RFA++ ST A+ P ILRPAPNG N S P P S SG N
Sbjct: 199 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 378
Query: 467 SSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRY 646
SS SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R DS M A RY
Sbjct: 379 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 558
Query: 647 GIRLRSSSI 673
I S S+
Sbjct: 559 VILFMSVSL 585
Score = 35.4 bits (71), Expect(3) = 3e-060
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = -1 / -1
Query: 258 VDMSDQFGMTLRRTQKLYLVPR 193
+DM++ FG+T+RR +KL LVP+
Sbjct: 176 IDMTEVFGLTVRRKEKLLLVPK 111
Score = 33.6 bits (67), Expect(3) = 3e-060
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1 / -1
Query: 753 SELMNNRHVLAKLQKEVRTATPDGRMVMEE 664
+ELM H++ KLQ EVR P G+ ++ E
Sbjct: 668 AELMRRPHMMEKLQDEVRGILPQGQEIISE 579
>gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24a03 3', mRNA sequence
Length = 645
Score = 203 bits (438), Expect(3) = 3e-060
Identities = 74/136 (54%), Positives = 99/136 (72%)
Frame = -1 / -2
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+HP AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 569 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 390
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ EEF PERF ++G ++ G D +F+PFGAGRR+C G IA VE+MLA
Sbjct: 389 RDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLA 210
Query: 318 NLIYHFDWEMPAEMER 271
NL+ HFDWE+P + R
Sbjct: 209 NLVCHFDWELPLGVGR 162
Score = 134 bits (287), Expect = 2e-030
Identities = 66/129 (51%), Positives = 75/129 (58%)
Frame = +2 / +1
Query: 287 GISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKN 466
G SQSKW RFA++ ST A+ P ILRPAPNG N S P P S SG N
Sbjct: 178 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 357
Query: 467 SSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRY 646
SS SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R DS M A RY
Sbjct: 358 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 537
Query: 647 GIRLRSSSI 673
I S S+
Sbjct: 538 VILFMSVSL 564
Score = 35.4 bits (71), Expect(3) = 3e-060
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = -1 / -2
Query: 258 VDMSDQFGMTLRRTQKLYLVPR 193
+DM++ FG+T+RR +KL LVP+
Sbjct: 155 IDMTEVFGLTVRRKEKLLLVPK 90
Score = 33.6 bits (67), Expect(3) = 3e-060
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / -2
Query: 750 ELMNNRHVLAKLQKEVRTATPDGRMVMEE 664
ELM H++ KLQ EVR P G+ ++ E
Sbjct: 644 ELMRRPHMMXKLQDEVRGILPQGQEIISE 558
>gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 3', mRNA sequence
Length = 703
Score = 205 bits (443), Expect(2) = 3e-060
Identities = 74/137 (54%), Positives = 100/137 (72%)
Frame = -1 / -2
Query: 675 VMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALAR 496
V ++DL +PYLKA IKE++R+H P P ++PH S +C INGYTIP+GTR +N +A+ R
Sbjct: 585 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 406
Query: 495 DPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLAN 316
DP+ W+ EEF PERF+E G A +D G D ++ PFG+GRRIC G FA AT+++ML N
Sbjct: 405 DPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTN 226
Query: 315 LIYHFDWEMPAEMERTG 265
L+YHFDW++P E E G
Sbjct: 225 LMYHFDWKLPPESEEEG 175
Score = 120 bits (257), Expect(2) = 3e-031
Identities = 67/138 (48%), Positives = 80/138 (57%)
Frame = +2 / +2
Query: 266 PVRSISAGISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCS 445
P S S G QSKW MRF SM VA+A + P ILRP PNG S P S +A+ P S
Sbjct: 176 PSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPPS 355
Query: 446 RKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDS 625
RSG NSS LSQ +GSL A L RVP G+V*P + S +E+ G +G G R S
Sbjct: 356 MNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVS 535
Query: 626 LMVAFRYGIRLRSSSITM 679
L+ AFR G RSS +T+
Sbjct: 536 LITAFR*GRPWRSSWVTV 589
Score = 47.8 bits (98), Expect(2) = 3e-060
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = -1 / -2
Query: 786 ETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEED 661
+TS +VLEY+M LM N V+A LQ EVR+ P G+ + +D
Sbjct: 699 DTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQD 574
Score = 35.9 bits (72), Expect(2) = 3e-031
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1 / +1
Query: 685 VGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CL 786
+G PHL L G D V+HQ HGV Q+ *C+
Sbjct: 598 LGYGAPHLGL*HGHDAGVLHQPNHGVFQYYG*CV 699
>gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 5', mRNA sequence
Length = 533
Score = 195 bits (421), Expect(2) = 4e-060
Identities = 70/128 (54%), Positives = 95/128 (74%)
Frame = -1 / +1
Query: 675 VMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALAR 496
V ++DL +PYLKA IKE++R+H P P ++PH S +C INGYTIP+GTR +N +A+ R
Sbjct: 148 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 327
Query: 495 DPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLAN 316
DP+ W+ EEF PERF+E G A +D G D ++ PFG+GRRIC G FA AT+++ML N
Sbjct: 328 DPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTN 507
Query: 315 LIYHFDWE 292
L+YHFDW+
Sbjct: 508 LMYHFDWK 531
Score = 115 bits (246), Expect(2) = 3e-032
Identities = 63/128 (49%), Positives = 76/128 (59%)
Frame = +2 / -1
Query: 296 QSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKNSSA 475
QSKW MRF SM VA+A + P ILRP PNG S P S +A+ P S RSG NSS
Sbjct: 527 QSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPPSMNRSGMNSSG 348
Query: 476 LSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRYGIR 655
LSQ +GSL A L RVP G+V*P + S +E+ G +G G R SL+ AFR G
Sbjct: 347 LSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GRP 168
Query: 656 LRSSSITM 679
RSS +T+
Sbjct: 167 WRSSWVTV 144
Score = 57.4 bits (119), Expect(2) = 4e-060
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = -1 / +1
Query: 813 LVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEED 661
L+ MFEA +TS +VLEY+M LM N V+A LQ EVR+ P G+ + +D
Sbjct: 7 LLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQD 159
Score = 44.1 bits (90), Expect(2) = 3e-032
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +2 / -1
Query: 683 PSGVAVLTSFWSLARTWRLFISSLMEYSSTRNDVSMAASNMFTS 814
P G+ +LTS S+A T IS M YSST DVS+ ASNM ++
Sbjct: 137 PLGMVLLTSACSMAMTRGFCISRTMAYSSTMVDVSVPASNMISN 6
>gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40l11 3', mRNA sequence
Length = 696
Score = 203 bits (438), Expect(4) = 7e-060
Identities = 74/136 (54%), Positives = 99/136 (72%)
Frame = -1 / -1
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+HP AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 582 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 403
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ EEF PERF ++G ++ G D +F+PFGAGRR+C G IA VE+MLA
Sbjct: 402 RDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLA 223
Query: 318 NLIYHFDWEMPAEMER 271
NL+ HFDWE+P + R
Sbjct: 222 NLVCHFDWELPLGVGR 175
Score = 134 bits (287), Expect = 2e-030
Identities = 66/129 (51%), Positives = 75/129 (58%)
Frame = +2 / +2
Query: 287 GISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKN 466
G SQSKW RFA++ ST A+ P ILRPAPNG N S P P S SG N
Sbjct: 191 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 370
Query: 467 SSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRY 646
SS SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R DS M A RY
Sbjct: 371 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 550
Query: 647 GIRLRSSSI 673
I S S+
Sbjct: 551 VILFMSVSL 577
Score = 35.4 bits (71), Expect(4) = 7e-060
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = -1 / -1
Query: 258 VDMSDQFGMTLRRTQKLYLVPR 193
+DM++ FG+T+RR +KL LVP+
Sbjct: 168 IDMTEVFGLTVRRKEKLLLVPK 103
Score = 27.2 bits (53), Expect(4) = 7e-060
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -1 / -2
Query: 789 IETSFLVLEYSMSELMNNRHVL 724
I+TS VLE++++ELM H++
Sbjct: 695 IDTSANVLEFTLAELMRRPHMM 630
Score = 23.1 bits (44), Expect(4) = 7e-060
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1 / -1
Query: 720 KLQKEVRTATPDGRMVMEE 664
KLQ EVR P G+ ++ E
Sbjct: 627 KLQDEVRGILPQGQEIISE 571
>gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m23 5', mRNA sequence
Length = 660
Score = 205 bits (443), Expect(2) = 2e-059
Identities = 74/137 (54%), Positives = 100/137 (72%)
Frame = -1 / +2
Query: 675 VMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALAR 496
V ++DL +PYLKA IKE++R+H P P ++PH S +C INGYTIP+GTR +N +A+ R
Sbjct: 134 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 313
Query: 495 DPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLAN 316
DP+ W+ EEF PERF+E G A +D G D ++ PFG+GRRIC G FA AT+++ML N
Sbjct: 314 DPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTN 493
Query: 315 LIYHFDWEMPAEMERTG 265
L+YHFDW++P E E G
Sbjct: 494 LMYHFDWKLPPESEEEG 544
Score = 120 bits (257), Expect(2) = 1e-030
Identities = 67/138 (48%), Positives = 80/138 (57%)
Frame = +2 / -1
Query: 266 PVRSISAGISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCS 445
P S S G QSKW MRF SM VA+A + P ILRP PNG S P S +A+ P S
Sbjct: 543 PSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPPS 364
Query: 446 RKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDS 625
RSG NSS LSQ +GSL A L RVP G+V*P + S +E+ G +G G R S
Sbjct: 363 MNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVS 184
Query: 626 LMVAFRYGIRLRSSSITM 679
L+ AFR G RSS +T+
Sbjct: 183 LITAFR*GRPWRSSWVTV 130
Score = 45.5 bits (93), Expect(2) = 2e-059
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = -1 / +2
Query: 798 EAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEED 661
EA LVLEY+M LM N V+A LQ EVR+ P G+ + +D
Sbjct: 8 EAGTXHIXLVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQD 145
Score = 33.6 bits (67), Expect(2) = 1e-030
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +2 / -1
Query: 683 PSGVAVLTSFWSLARTWRLFISSLMEYSSTRNDVSMAAS 799
P G+ +LTS S+A T IS M YSSTR + AS
Sbjct: 123 PLGMVLLTSACSMAMTRGFCISRTMAYSSTRXMCXVPAS 7
>gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12i23 3', mRNA sequence
Length = 669
Score = 203 bits (438), Expect(3) = 2e-059
Identities = 74/136 (54%), Positives = 99/136 (72%)
Frame = -1 / -3
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+HP AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 595 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 416
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ EEF PERF ++G ++ G D +F+PFGAGRR+C G IA VE+MLA
Sbjct: 415 RDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLA 236
Query: 318 NLIYHFDWEMPAEMER 271
NL+ HFDWE+P + R
Sbjct: 235 NLVCHFDWELPLGVGR 188
Score = 134 bits (287), Expect = 2e-030
Identities = 66/129 (51%), Positives = 75/129 (58%)
Frame = +2 / +3
Query: 287 GISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKN 466
G SQSKW RFA++ ST A+ P ILRPAPNG N S P P S SG N
Sbjct: 204 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 383
Query: 467 SSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRY 646
SS SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R DS M A RY
Sbjct: 384 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 563
Query: 647 GIRLRSSSI 673
I S S+
Sbjct: 564 VILFMSVSL 590
Score = 35.4 bits (71), Expect(3) = 2e-059
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = -1 / -3
Query: 258 VDMSDQFGMTLRRTQKLYLVPR 193
+DM++ FG+T+RR +KL LVP+
Sbjct: 181 IDMTEVFGLTVRRKEKLLLVPK 116
Score = 30.9 bits (61), Expect(3) = 2e-059
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1 / -3
Query: 747 LMNNRHVLAKLQKEVRTATPDGRMVMEE 664
LM H++ KLQ EVR P G+ ++ E
Sbjct: 667 LMRRPHMMEKLQDEVRGILPQGQEIISE 584
>gb|AV917238.1|AV917238 AV917238 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b09 5', mRNA sequence
Length = 615
Score = 90.9 bits (192), Expect(3) = 2e-059
Identities = 38/74 (51%), Positives = 53/74 (71%)
Frame = -1 / +1
Query: 882 DFVHLLLSLQKDYGLTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEV 703
DF+H+LLS+Q++Y LT D+IK L+ MFEA +TS +VLEY+M LM N V+A LQ EV
Sbjct: 232 DFIHVLLSVQQEYNLTRDHIKAQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEV 411
Query: 702 RTATPDGRMVMEED 661
R+ P G+ + +D
Sbjct: 412 RSTIPKGKDTVTQD 453
Score = 89.5 bits (189), Expect(3) = 2e-059
Identities = 32/63 (50%), Positives = 49/63 (77%)
Frame = -1 / +1
Query: 1107 QGRNKLFRELTETSAALLGGFNVEDYFPKLADVDLFLRIICAKAKGVSKRWDSLFNELLS 928
+G NK FREL E +A+L+GGFN+ED+FP L +++F +I+CAKA+ V+ +WD L + L+
Sbjct: 16 RGLNKHFRELVEANASLIGGFNLEDHFPALVKLEIFRKIVCAKARRVNNKWDDLLDRLID 195
Query: 927 EYA 919
E+A
Sbjct: 196 EHA 204
Score = 89.0 bits (188), Expect(3) = 2e-059
Identities = 31/58 (53%), Positives = 44/58 (75%)
Frame = -1 / +1
Query: 675 VMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWAL 502
V ++DL +PYLKA IKE++R+H P P ++PH S +C INGYTIP+GTR +N +A+
Sbjct: 442 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAI 615
Score = 61.1 bits (127), Expect(3) = 2e-028
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +1 / -1
Query: 685 VGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CLDGCFEHVHKYALDVIRGETVVFLQRQ 864
+G PHL L G D V+HQ HGV Q+ *C+ F+H + + D++ E V+ L R+
Sbjct: 429 LGYGAPHLGL*HGHDAGVLHQPNHGVFQYYG*CVRASFKHDQQLSFDMVSCEVVLLLNRK 250
Query: 865 QEVHEV 882
Q+V EV
Sbjct: 249 QDVDEV 232
Score = 60.2 bits (125), Expect(3) = 2e-028
Identities = 32/79 (40%), Positives = 44/79 (55%)
Frame = +1 / -1
Query: 877 EVFRVVVALLAAGERVLGQQLVEEAVPPLADALGLGADDPEEQVHVRQLREVVLHVEPAQ 1056
+V V V + R+ + +E+ VP + + GLGA++ E + Q REVVL VE A
Sbjct: 246 DVDEVPVLVQRRRGRMFIDEPIEQVVPLVVYSPGLGANNFSEDFQLHQCREVVLQVEAAD 67
Query: 1057 EGGAGLRQLPEQLVPALLP 1113
E G GL QLPE LV + P
Sbjct: 66 ERGVGLHQLPEVLVESSEP 10
Score = 43.7 bits (89), Expect(3) = 2e-028
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +2 / -2
Query: 515 LTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRYGIRLRSSSITM 679
L RVP G+V*P + S +E+ G +G G R SL+ AFR G RSS +T+
Sbjct: 602 LMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GRPWRSSWVTV 438
>gb|BQ471556.1|BQ471556 HV02M13r HV Hordeum vulgare subsp. vulgare cDNA clone HV02M13
5-PRIME, mRNA sequence
Length = 652
Score = 126 bits (270), Expect(3) = 4e-059
Identities = 48/92 (52%), Positives = 68/92 (73%)
Frame = -1 / +2
Query: 1194 GTALDMTELLGGYASDFVCRAVLGESHRKQGRNKLFRELTETSAALLGGFNVEDYFPKLA 1015
G ALDM+ELL + D VC AV G S R++G NK FREL E +A+L+GGFN+ED+FP L
Sbjct: 257 GVALDMSELLNAFVFDIVCHAVAGNSFRERGLNKHFRELVEANASLIGGFNLEDHFPALV 436
Query: 1014 DVDLFLRIICAKAKGVSKRWDSLFNELLSEYA 919
+++F +I+CAKA+ V+ +WD L + L+ E+A
Sbjct: 437 KLEIFRKIVCAKARRVNNKWDDLLDRLIDEHA 532
Score = 95.5 bits (202), Expect(3) = 4e-059
Identities = 37/61 (60%), Positives = 46/61 (75%)
Frame = -1 / +2
Query: 1449 QAAEAVLRTHDHVLASRPRNPVADIIRYNCTDVAFAPYGEYWRTARKVVNTHLLSAKMVF 1270
+AA+AVLRTHDHV ASRP +PVA I+ Y DV FAPYG +WR +K+ THLL+A+ V
Sbjct: 8 RAAQAVLRTHDHVFASRPHSPVAHILFYGSADVVFAPYGHHWRQVKKISTTHLLTARKVH 187
Query: 1269 S 1267
S
Sbjct: 188 S 190
Score = 70.7 bits (148), Expect(2) = 2e-023
Identities = 35/60 (58%), Positives = 41/60 (68%)
Frame = +2 / -2
Query: 1268 EKTILALSRCVLTTFRAVRQYSPYGAKATSVQL*RMMSATGFRGRDASTWSCVRSTASAA 1447
E T LA+SR V+ F RQ+ P GAK TS + *+ M ATG G DA+TWSCVRSTA AA
Sbjct: 189 EWTFLAVSRWVVEIFLTWRQWWP*GAKTTSAEP*KRMWATGEWGLDANTWSCVRSTACAA 10
Score = 63.4 bits (132), Expect(2) = 2e-023
Identities = 33/79 (41%), Positives = 45/79 (56%)
Frame = +1 / -1
Query: 877 EVFRVVVALLAAGERVLGQQLVEEAVPPLADALGLGADDPEEQVHVRQLREVVLHVEPAQ 1056
+V V V + R+ + +E+ VP + + GLGA++ E + Q REVVL VE A
Sbjct: 574 DVDEVPVLVQRRRGRMFIDEPIEQVVPLVVYSPGLGANNFSEDFQLHQCREVVLQVEAAD 395
Query: 1057 EGGAGLRQLPEQLVPALLP 1113
E G GL QLPE LV + LP
Sbjct: 394 ERGVGLHQLPEVLVESSLP 338
Score = 46.4 bits (95), Expect(3) = 4e-059
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = -1 / +2
Query: 882 DFVHLLLSLQKDYGLTTDNIKGILVNMFEA 793
DF+H+LLS+Q++Y LT D+IK L+ MFEA
Sbjct: 560 DFIHVLLSVQQEYNLTRDHIKAQLLIMFEA 649
>gb|BG301073.1|BG301073 HVSMEb0019H09f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0019H09f, mRNA sequence
Length = 578
Score = 175 bits (376), Expect(2) = 5e-058
Identities = 69/113 (61%), Positives = 87/113 (76%)
Frame = -1 / +3
Query: 1605 PTPPGKLPIIGHLHLIGSHPHVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLR 1426
P+P +LP+IGHLH +G PHVS R L A++G +GLMLV++GAVPT+VVSTP AA+AVLR
Sbjct: 18 PSPGWRLPVIGHLHQVGPLPHVSLRHLAAEHGRDGLMLVRLGAVPTLVVSTPAAAQAVLR 197
Query: 1425 THDHVLASRPRNPVADIIRYNCTDVAFAPYGEYWRTARKVVNTHLLSAKMVFS 1267
THDHV A RP +PVA I+ Y DV FAPYG +WR +K+ THLL+A+ V S
Sbjct: 198 THDHVFAXRPHSPVAHILFYGSADVVFAPYGHHWRQVKKISTTHLLTARKVHS 356
Score = 118 bits (253), Expect(2) = 4e-028
Identities = 61/113 (53%), Positives = 71/113 (62%)
Frame = +2 / -2
Query: 1268 EKTILALSRCVLTTFRAVRQYSPYGAKATSVQL*RMMSATGFRGRDASTWSCVRSTASAA 1447
E T LA+SR V+ F RQ+ P GAK TS + *+ M ATG G A+TWSCVRSTA AA
Sbjct: 355 EWTFLAVSRWVVEIFLTWRQWWP*GAKTTSAEP*KRMWATGEWGLXANTWSCVRSTACAA 176
Query: 1448 CGVDTTMVGTAPTCTSISPLWPYLAWRSRKETCGWEPMRWRCPMMGSFPGGVG 1606
GV+TT VGTAP TS+ P P A R R+ETCG P R P+ GS G G
Sbjct: 175 AGVETTSVGTAPRRTSMRPSRPCSAARWRRETCGRGPTWCRWPITGSRQPGEG 17
Score = 71.2 bits (149), Expect(2) = 5e-058
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = -1 / +3
Query: 1194 GTALDMTELLGGYASDFVCRAVLGESHRKQGRNKLFRELTETSAALLGGFNV 1039
G ALDM+ELL + D VC A G S R++G NK FREL E +A+L+GGFN+
Sbjct: 423 GVALDMSELLNAFVFDIVCHAGAGNSFRERGLNKHFRELVEANASLIGGFNL 578
Score = 30.4 bits (60), Expect(2) = 4e-028
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2 / -2
Query: 1043 LNPPRRAALVSVSSRNSLFRPCFRWDSPSTARHT 1144
L PP AL S SSR L P + P+ A HT
Sbjct: 574 LKPPMSEALASTSSRKCLLSPRSLKELPAPAWHT 473
>gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33d19 5', mRNA sequence
Length = 597
Score = 124 bits (266), Expect(3) = 5e-058
Identities = 45/83 (54%), Positives = 61/83 (73%)
Frame = -1 / +1
Query: 675 VMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALAR 496
V ++DL +PYLKA IKE++R+H P P ++PH S +C INGYTIP+GTR +N +A+ R
Sbjct: 349 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 528
Query: 495 DPTCWDKAEEFFPERFLEQGRDA 427
DP+ W+ EEF PERF+E G A
Sbjct: 529 DPSNWESPEEFMPERFMEGGSAA 597
Score = 90.9 bits (192), Expect(3) = 5e-058
Identities = 38/74 (51%), Positives = 53/74 (71%)
Frame = -1 / +1
Query: 882 DFVHLLLSLQKDYGLTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEV 703
DF+H+LLS+Q++Y LT D+IK L+ MFEA +TS +VLEY+M LM N V+A LQ EV
Sbjct: 139 DFIHVLLSVQQEYNLTRDHIKAQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEV 318
Query: 702 RTATPDGRMVMEED 661
R+ P G+ + +D
Sbjct: 319 RSTIPKGKDTVTQD 360
Score = 70.3 bits (147), Expect(2) = 1e-023
Identities = 40/84 (47%), Positives = 50/84 (59%)
Frame = +2 / -2
Query: 428 ASRPCSRKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGG 607
A+ P S RSG NSS LSQ +GSL A L RVP G+V*P + S +E+ G +G G
Sbjct: 596 AALPPSMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM 417
Query: 608 WMRMDSLMVAFRYGIRLRSSSITM 679
R SL+ AFR G RSS +T+
Sbjct: 416 *SRSVSLITAFR*GRPWRSSWVTV 345
Score = 61.1 bits (127), Expect(2) = 1e-023
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +1 / -1
Query: 685 VGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CLDGCFEHVHKYALDVIRGETVVFLQRQ 864
+G PHL L G D V+HQ HGV Q+ *C+ F+H + + D++ E V+ L R+
Sbjct: 336 LGYGAPHLGL*HGHDAGVLHQPNHGVFQYYG*CVRASFKHDQQLSFDMVSCEVVLLLNRK 157
Query: 865 QEVHEV 882
Q+V EV
Sbjct: 156 QDVDEV 139
Score = 49.2 bits (101), Expect(3) = 5e-058
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = -1 / +1
Query: 1029 FPKLADVDLFLRIICAKAKGVSKRWDSLFNELLSEYA 919
FP L +++F +I+CAKA+ V+ +WD L + L+ E+A
Sbjct: 1 FPALVKLEIFRKIVCAKARRVNNKWDDLLDRLIDEHA 111
>gb|AV934098.1|AV934098 AV934098 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 5', mRNA sequence
Length = 638
Score = 111 bits (236), Expect(3) = 7e-058
Identities = 43/111 (38%), Positives = 72/111 (64%)
Frame = -1 / +3
Query: 996 RIICAKAKGVSKRWDSLFNELLSEYALSGGKQGDHNSEDFVHLLLSLQKDYGLTTDNIKG 817
+ +CAKAK V RW L ++++ + DH +DFV ++LS+Q++Y LT +++K
Sbjct: 15 KAVCAKAKRVRNRWADLLDQVIDNHVSKRKLASDHKDDDFVDIMLSVQQEYALTREHMKA 194
Query: 816 ILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEE 664
+L ++F AI+TS VLE++++ELM H++ KLQ EVR P G+ ++ E
Sbjct: 195 LLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVRGILPQGQEIISE 347
Score = 109 bits (232), Expect(3) = 7e-058
Identities = 38/67 (56%), Positives = 52/67 (77%)
Frame = -1 / +3
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+HP AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 336 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 515
Query: 498 RDPTCWD 478
RDP+ W+
Sbjct: 516 RDPSSWE 536
Score = 74.8 bits (157), Expect(3) = 6e-025
Identities = 35/65 (53%), Positives = 41/65 (63%)
Frame = +2 / -2
Query: 479 SQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRYGIRL 658
SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R DS M A RY I
Sbjct: 535 SQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRYVILF 356
Query: 659 RSSSI 673
S S+
Sbjct: 355 MSVSL 341
Score = 48.7 bits (100), Expect(3) = 6e-025
Identities = 25/103 (24%), Positives = 52/103 (50%)
Frame = +1 / -1
Query: 682 AVGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CLDGCFEHVHKYALDVIRGETVVFLQR 861
++G PHL+L L V H+L+ G + *C+ + + + + V+ E+++ L R
Sbjct: 329 SLG*NTPHLIL*LFHHVWPPHELSQGEFKDVS*CVYRTKKDICEESFHVLSCESILLLDR 150
Query: 862 QQEVHEVFRVVVALLAAGERVLGQQLVEEAVPPLADALGLGAD 990
+H++ +V+ ++ LV++ PP+ + GLG +
Sbjct: 149 *HNIHKIVILVIRR*LPLAHMIVDHLVQQIRPPVPHSFGLGTN 21
Score = 44.1 bits (90), Expect(3) = 7e-058
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1 / +1
Query: 471 EEFFPERFLEQGRDAEVDMYGKDIRFVPFGA 379
EEF PERF ++G ++ G D +F+PFGA
Sbjct: 544 EEFIPERFTDEGSTMHINFKGNDFQFLPFGA 636
Score = 29.5 bits (58), Expect(3) = 6e-025
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +2 / -1
Query: 377 PAPNGTNRMSLPYMSTSASRPCSRKRSGKNSS 472
PAPNG N S P P S SG NSS
Sbjct: 638 PAPNGKN*KSFPLKLICIVLPSSVNLSGMNSS 543
>gb|BE420993.1|BE420993 HWM004.F10 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.F10, mRNA sequence
Length = 1299
Score = 138 bits (296), Expect(3) = 2e-057
Identities = 54/120 (45%), Positives = 82/120 (68%)
Frame = -1 / +2
Query: 1203 ASPGTALDMTELLGGYASDFVCRAVLGESHRKQGRNKLFRELTETSAALLGGFNVEDYFP 1024
AS TA+DM+ELL + +D VC AV G+ ++G NKL REL E ++ LLGGFN+ DYFP
Sbjct: 365 ASKCTAIDMSELLNAFTNDIVCHAVSGKLFTERGHNKLCRELVEANSLLLGGFNLVDYFP 544
Query: 1023 KLADVDLFLRIICAKAKGVSKRWDSLFNELLSEYALSGGKQGDHNSEDFVHLLLSLQKDY 844
+L +D+ +R+ CAKA V+K WD+L N ++ E+A + ++ DF+ ++LS+Q +Y
Sbjct: 545 RLVQMDIIMRMGCAKAXKVNKMWDNLLNSIIDEHARKSVPEHNNEDNDFIEVVLSIQHEY 724
Score = 104 bits (221), Expect(3) = 2e-057
Identities = 42/71 (59%), Positives = 55/71 (77%)
Frame = -1 / +2
Query: 1479 AVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNCTDVAFAPYGEYWRTARKVVN 1300
A+ T+VVS+P A +AVLRTHDHV ASRP + V++I+ Y +DVAF+PYGE+WR RK+
Sbjct: 95 ALATLVVSSPSAGQAVLRTHDHVFASRPYSLVSEILFYGPSDVAFSPYGEHWRQVRKIAT 274
Query: 1299 THLLSAKMVFS 1267
THLL+ K V S
Sbjct: 275 THLLTNKKVRS 307
Score = 80.3 bits (169), Expect(2) = 7e-022
Identities = 39/71 (54%), Positives = 45/71 (63%)
Frame = +2 / -1
Query: 1268 EKTILALSRCVLTTFRAVRQYSPYGAKATSVQL*RMMSATGFRGRDASTWSCVRSTASAA 1447
E+T L + RCV+ F RQ SP G KATS *+ +S T GRDA TWSCVRSTA A
Sbjct: 306 ERTFLLVRRCVVAIFLTCRQCSP*GLKATSEGP*KRISLTRE*GRDAKTWSCVRSTACPA 127
Query: 1448 CGVDTTMVGTA 1480
G DTT V +A
Sbjct: 126 LGDDTTSVASA 94
Score = 49.2 bits (101), Expect(2) = 7e-022
Identities = 28/88 (31%), Positives = 41/88 (46%)
Frame = +1 / -3
Query: 835 GETVVFLQRQQEVHEVFRVVVALLAAGERVLGQQLVEEAVPPLADALGLGADDPEEQVHV 1014
G V+ L R+ ++EV +VV + +E+ +P L GL A P + VH+
Sbjct: 733 GRLVLVLDRKHHLNEVVVLVVVFWHRLSCMFVDDTIEQVIPHLIHFXGLSATHPHDDVHL 554
Query: 1015 RQLREVVLHVEPAQEGGAGLRQLPEQLV 1098
Q EVV VE E GL +L + V
Sbjct: 553 HQPGEVVHQVESP*EQ*VGLDELSTEFV 470
Score = 28.1 bits (55), Expect(3) = 2e-057
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1 / +1
Query: 651 MPYLKATIKESMRIHPPAPFLLPHFS 574
+ YLKA +E +R+H P L P F+
Sbjct: 949 LAYLKAGNQEKLRLHMPGHILEPTFN 1026
>gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20j07 3', mRNA sequence
Length = 660
Score = 205 bits (443), Expect(2) = 6e-057
Identities = 74/137 (54%), Positives = 100/137 (72%)
Frame = -1 / -3
Query: 675 VMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALAR 496
V ++DL +PYLKA IKE++R+H P P ++PH S +C INGYTIP+GTR +N +A+ R
Sbjct: 568 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 389
Query: 495 DPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLAN 316
DP+ W+ EEF PERF+E G A +D G D ++ PFG+GRRIC G FA AT+++ML N
Sbjct: 388 DPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTN 209
Query: 315 LIYHFDWEMPAEMERTG 265
L+YHFDW++P E E G
Sbjct: 208 LMYHFDWKLPPESEEEG 158
Score = 120 bits (257), Expect(2) = 3e-029
Identities = 67/138 (48%), Positives = 80/138 (57%)
Frame = +2 / +3
Query: 266 PVRSISAGISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCS 445
P S S G QSKW MRF SM VA+A + P ILRP PNG S P S +A+ P S
Sbjct: 159 PSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPPS 338
Query: 446 RKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDS 625
RSG NSS LSQ +GSL A L RVP G+V*P + S +E+ G +G G R S
Sbjct: 339 MNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVS 518
Query: 626 LMVAFRYGIRLRSSSITM 679
L+ AFR G RSS +T+
Sbjct: 519 LITAFR*GRPWRSSWVTV 572
Score = 36.8 bits (74), Expect(2) = 6e-057
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1 / -3
Query: 762 YSMSELMNNRHVLAKLQKEVRTATPDGRMVMEED 661
Y+M LM N V+A LQ EVR+ P G+ + +D
Sbjct: 658 YAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQD 557
Score = 29.0 bits (57), Expect(2) = 3e-029
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1 / +2
Query: 685 VGRRRPHLLLELGQDVAVVHQLAHGV 762
+G PHL L G D V+HQ HGV
Sbjct: 581 LGYGAPHLGL*HGHDAGVLHQPNHGV 658
>gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j16 3', mRNA sequence
Length = 644
Score = 172 bits (371), Expect(3) = 9e-057
Identities = 61/114 (53%), Positives = 81/114 (71%)
Frame = -1 / -3
Query: 612 IHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGR 433
++P APFL PH + DC I GY +PAGT ++VN WA+ RD W+ AEE+ PERF+++G
Sbjct: 489 LYPVAPFLPPHLAMGDCNIVGYMVPAGTHILVNVWAIGRDSNSWEDAEEYIPERFIDEGS 310
Query: 432 DAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMER 271
V+ G D +F+PFGAGRR+C G I VE+MLANLIYHFDWE+P ++R
Sbjct: 309 AVHVNFKGNDFQFLPFGAGRRMCPGINLGITNVELMLANLIYHFDWELPVGVDR 148
Score = 109 bits (233), Expect = 5e-023
Identities = 54/112 (48%), Positives = 65/112 (58%)
Frame = +2 / +2
Query: 275 SISAGISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKR 454
S G SQSKW MRFA++ ST+ + P ILRPAPNG N S P T + P S
Sbjct: 152 STPTGSSQSKWYMRFANISSTLVIPRFIPGHILRPAPNGKN*KSFPLKLT*TALPSSMNL 331
Query: 455 SGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGW 610
SG SSA S + SL AH LT VPAG +*P + QS + +CG R GA G+
Sbjct: 332 SGMYSSASSHELESLPMAHTLTRMCVPAGTM*PTMLQSPMARCGGRKGATGY 487
Score = 51.9 bits (107), Expect(3) = 9e-057
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = -1 / -2
Query: 765 EYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEEDLSRMPYLKATIKESMRI 610
E++++ELM ++ KLQ EVR+ P G+ + E +M YL+A IKES+R+
Sbjct: 643 EFTLAELMRRPSLMGKLQDEVRSIVPLGQETVIETDIKMVYLRAVIKESLRV 488
Score = 35.9 bits (72), Expect(3) = 9e-057
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = -1 / -3
Query: 258 VDMSDQFGMTLRRTQKLYLVPR 193
+DM++ FG+T+RR +KL LVP+
Sbjct: 141 IDMAEVFGLTMRRKEKLLLVPK 76
>gb|BE214490.1|BE214490 HV_CEb0003J19f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003J19f, mRNA sequence
Length = 707
Score = 122 bits (260), Expect(3) = 4e-056
Identities = 55/78 (70%), Positives = 63/78 (80%)
Frame = -1 / +3
Query: 1500 LMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNCTDVAFAPYGEYWR 1321
LML+++GAV T VVS+P+AA AVLRTHDH LASR R+ V DII Y TDVAFAPYGE WR
Sbjct: 243 LMLLRLGAVNTGVVSSPRAAAAVLRTHDHALASRSRSAVDDIIFYKRTDVAFAPYGEPWR 422
Query: 1320 TARKVVNTHLLSAKMVFS 1267
ARKVV TH+LSA+ V S
Sbjct: 423 QARKVVTTHMLSARKVNS 476
Score = 98.7 bits (209), Expect(3) = 4e-036
Identities = 48/72 (66%), Positives = 53/72 (73%)
Frame = +2 / -2
Query: 1268 EKTILALSRCVLTTFRAVRQYSPYGAKATSVQL*RMMSATGFRGRDASTWSCVRSTASAA 1447
E T ALS CV+TTF A Q SP GAKATSV+L*+MMS+T R DAS WSCVR TA+AA
Sbjct: 475 EFTFRALSMCVVTTFLACLQGSP*GAKATSVRL*KMMSSTAERDLDASAWSCVRRTAAAA 296
Query: 1448 CGVDTTMVGTAP 1483
G DTT V TAP
Sbjct: 295 RGEDTTPVFTAP 260
Score = 72.5 bits (152), Expect(3) = 4e-056
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = -1 / +3
Query: 1212 AAEASPGTALDMTELLGGYASDFVCRAVLGESHRKQGRNKLFRELTETSAALLGGFN 1042
A G +DM+ELLG YA+D VC VLG +HR GRNKL R+L + AL+G FN
Sbjct: 534 ATTGGTGAPVDMSELLGSYANDLVCPVVLGRNHRDNGRNKLVRQLIGINMALVGRFN 704
Score = 63.8 bits (133), Expect(3) = 4e-056
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = -1 / +3
Query: 1611 LPPTPPGKLPIIGHLHLIGSHPHVSFRDLHAKYGHNGLML 1492
LPP+P LP+IGHLHL+G PHVSFRDL K+G + ++L
Sbjct: 135 LPPSPARALPVIGHLHLVGPLPHVSFRDLANKHGRDLMLL 254
Score = 54.7 bits (113), Expect(3) = 4e-036
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = +2 / -2
Query: 1511 PYLAWRSRKETCGWEPMRWRCPMMGSFPGGVGGS 1612
P L RSRKETCG P RWRCP+ GS G GGS
Sbjct: 235 PCLLARSRKETCGRGPTRWRCPITGSARAGEGGS 134
Score = 43.7 bits (89), Expect(3) = 4e-036
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2 / -2
Query: 1043 LNPPRRAALVSVSSRNSLFRPCFRWDSPSTARHTK 1147
LN P A + +S R SLFRP RW PST HT+
Sbjct: 703 LNLPTSAMFIPISWRTSLFRPLSRWFLPSTTGHTR 599
>gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3e02 3', mRNA sequence
Length = 597
Score = 203 bits (438), Expect(2) = 8e-056
Identities = 74/136 (54%), Positives = 99/136 (72%)
Frame = -1 / -3
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+HP AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 589 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 410
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ EEF PERF ++G ++ G D +F+PFGAGRR+C G IA VE+MLA
Sbjct: 409 RDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLA 230
Query: 318 NLIYHFDWEMPAEMER 271
NL+ HFDWE+P + R
Sbjct: 229 NLVCHFDWELPLGVGR 182
Score = 134 bits (287), Expect = 2e-030
Identities = 66/129 (51%), Positives = 75/129 (58%)
Frame = +2 / +3
Query: 287 GISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKN 466
G SQSKW RFA++ ST A+ P ILRPAPNG N S P P S SG N
Sbjct: 198 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 377
Query: 467 SSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRY 646
SS SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R DS M A RY
Sbjct: 378 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 557
Query: 647 GIRLRSSSI 673
I S S+
Sbjct: 558 VILFMSVSL 584
Score = 35.4 bits (71), Expect(2) = 8e-056
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = -1 / -3
Query: 258 VDMSDQFGMTLRRTQKLYLVPR 193
+DM++ FG+T+RR +KL LVP+
Sbjct: 175 IDMTEVFGLTVRRKEKLLLVPK 110
>gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak43p03 5', mRNA sequence
Length = 589
Score = 216 bits (467), Expect = 2e-055
Identities = 83/145 (57%), Positives = 103/145 (71%)
Frame = -1 / +2
Query: 699 TATPDGRMVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVI 520
T T MV E DL YLKA IKE++R+H P P L+PH S +C +NGY IP+G RVI
Sbjct: 53 TITKGKEMVTEADLDSXAYLKAVIKETLRLHMPGPLLVPHLSMAECNVNGYIIPSGIRVI 232
Query: 519 VNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIA 340
+N+WALARDP W+ A+EF PERF+E G A +D G D ++PFG GRRIC G FAIA
Sbjct: 233 INSWALARDPGSWEHADEFMPERFMECGSAATMDYKGNDFSYLPFGTGRRICPGINFAIA 412
Query: 339 TVEIMLANLIYHFDWEMPAEMERTG 265
T+EIMLANLIYHF+W++P E+ G
Sbjct: 413 TIEIMLANLIYHFNWKLPTELMEDG 487
Score = 141 bits (302), Expect = 1e-032
Identities = 74/148 (50%), Positives = 87/148 (58%)
Frame = +2 / -2
Query: 260 LAPVRSISAGISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRP 439
L P S G Q KW MRFASMIS VA+A + P QILRP PNG S P S A+ P
Sbjct: 492 LMPSSINSVGSFQLKWYMRFASMISMVAIAKLIPGQILRPVPNGKYEKSFPL*SIVAALP 313
Query: 440 CSRKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRM 619
S RSG NSSA SQ GSLA A L MTR+P G++ P S +E+ G R+G G W
Sbjct: 312 HSINRSGMNSSACSQLPGSLARAQLLMMTRIPDGIMYPFTLHSAMERWGTRSGPGIWSLS 133
Query: 620 DSLMVAFRYGIRLRSSSITMRPSGVAVL 703
SL+ AFRY RS+S+T+ V VL
Sbjct: 132 VSLITAFRYAXLSRSASVTISFPLVIVL 49
>gb|BF621561.1|BF621561 HVSMEa0011G21f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0011G21f, mRNA sequence
Length = 860
Score = 169 bits (363), Expect(3) = 7e-055
Identities = 65/113 (57%), Positives = 86/113 (76%)
Frame = -1 / +3
Query: 1605 PTPPGKLPIIGHLHLIGSHPHVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLR 1426
P+P G LP+IGHLH++GS PHVS DL AK+ +GLML+++G+VPT++V++ AA AVLR
Sbjct: 144 PSPGGWLPVIGHLHMVGSQPHVSLGDLAAKHSRDGLMLLRLGSVPTLIVTSSNAARAVLR 323
Query: 1425 THDHVLASRPRNPVADIIRYNCTDVAFAPYGEYWRTARKVVNTHLLSAKMVFS 1267
THD V ASRP NP DII Y +D+AF PYG++WR +K+ THLL+A V S
Sbjct: 324 THDDVFASRPHNPATDIIFYGPSDIAFCPYGDHWRQVKKIAMTHLLTANKVRS 482
Score = 116 bits (248), Expect(2) = 7e-026
Identities = 58/113 (51%), Positives = 68/113 (60%)
Frame = +2 / -2
Query: 1268 EKTILALSRCVLTTFRAVRQYSPYGAKATSVQL*RMMSATGFRGRDASTWSCVRSTASAA 1447
E+T+LA+ RCV+ F Q+SP G KA S+ * MMS G GR+A T SCVRSTA AA
Sbjct: 481 ERTLLAVRRCVMAIFFTCLQWSP*GQKAMSLGP*NMMSVAGLWGREAKTSSCVRSTARAA 302
Query: 1448 CGVDTTMVGTAPTCTSISPLWPYLAWRSRKETCGWEPMRWRCPMMGSFPGGVG 1606
T VGT P S+ P LA RS +ETCGWEP R P+ GS P G G
Sbjct: 301 FDEVTMSVGTEPRRRSMRPSRLCLAARSPRETCGWEPTMCRWPITGSQPPGDG 143
Score = 62.9 bits (131), Expect(3) = 7e-055
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = -1 / +3
Query: 1194 GTALDMTELLGGYASDFVCRAVLGESHRKQGRNKLFRELTETSAALLGGF 1045
G ALD+ ELL + ++ V AV G+S R++G KLFREL ET++ L+GGF
Sbjct: 549 GAALDLGELLSAFYTNIVGHAVCGKSFRQKGHEKLFRELVETNSLLIGGF 698
Score = 25.8 bits (50), Expect(2) = 7e-026
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3 / -3
Query: 747 ARSWSTPAPGMMSRWL 794
ARSWS PAP SR L
Sbjct: 684 ARSWSPPAP*RASRGL 637
Score = 22.1 bits (42), Expect(3) = 7e-055
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -1 / +2
Query: 1047 FNVEDYFPKLADVDLFLRIICAKAK 973
F+V DYF +L + + ++C A+
Sbjct: 695 FHVGDYFLELLKLGIIRCMVCGAAQ 769
>gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36o23 5', mRNA sequence
Length = 664
Score = 200 bits (432), Expect(2) = 2e-054
Identities = 77/135 (57%), Positives = 98/135 (72%)
Frame = -1 / +3
Query: 651 MPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKA 472
+ YLKA IKE++R+H PAP L+PH + DC INGYTIP+GTRVIVN+ A+ARDP+ W+ A
Sbjct: 33 LAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESA 212
Query: 471 EEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWE 292
EEF PERF++ G A +D G ++PFG GRRIC G FAIA +EIMLANL+YHFDW+
Sbjct: 213 EEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWK 392
Query: 291 MPAEMERTGAKVDMS 247
+P G + S
Sbjct: 393 LPPGSAERGISMTES 437
Score = 140 bits (301), Expect = 2e-032
Identities = 72/133 (54%), Positives = 83/133 (62%)
Frame = +2 / -1
Query: 245 SDMSTLAPVRSISAGISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMST 424
+D L P + G QSKW R ASMIS AMA P ILRP PNG R P S
Sbjct: 439 NDSVILIPRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL*SM 260
Query: 425 SASRPCSRKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAG 604
+A+ P KRSG+NSSALSQ +GSLA A LTMTRVP GMV*P ++QS + + G R+GAG
Sbjct: 259 AAALPPCMKRSGRNSSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAG 80
Query: 605 GWMRMDSLMVAFR 643
R SLM AFR
Sbjct: 79 M*SRSVSLMTAFR 41
Score = 33.6 bits (67), Expect(2) = 2e-054
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1 / +3
Query: 258 VDMSDQFGMTLRRTQKLYLVPRIPK 184
+ M++ FG+T+ R KL LVP +P+
Sbjct: 420 ISMTESFGLTVHRKDKLLLVPLVPQ 494
>gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40p23 5', mRNA sequence
Length = 502
Score = 213 bits (460), Expect = 2e-054
Identities = 82/145 (56%), Positives = 102/145 (70%)
Frame = -1 / +1
Query: 699 TATPDGRMVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVI 520
T T MV E DL + YLKA IKE++R+H P P L+PH S +C +NGY IP+G RVI
Sbjct: 10 TITKGKEMVTEADLDSLAYLKAXIKETLRLHMPGPLLVPHLSMAECNVNGYIIPSGIRVI 189
Query: 519 VNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIA 340
+N+WALARDP W+ A EF PER +E G A +D G D ++PFG GRRIC G FAIA
Sbjct: 190 INSWALARDPGSWEHAXEFMPERXMECGSAATMDYKGNDFSYLPFGTGRRICPGINFAIA 369
Query: 339 TVEIMLANLIYHFDWEMPAEMERTG 265
T+EIMLANLIYHF+W++P E+ G
Sbjct: 370 TIEIMLANLIYHFNWKLPTELMEDG 444
Score = 137 bits (294), Expect = 2e-031
Identities = 73/148 (49%), Positives = 86/148 (58%)
Frame = +2 / -3
Query: 260 LAPVRSISAGISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRP 439
L P S G Q KW MRFASMIS VA+A + P QILRP PNG S P S A+ P
Sbjct: 449 LMPSSINSVGSFQLKWYMRFASMISMVAIAKLIPGQILRPVPNGKYEKSFPL*SIVAALP 270
Query: 440 CSRKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRM 619
S RSG NS A SQ GSLA A L MTR+P G++ P S +E+ G R+G G W
Sbjct: 269 HSIXRSGMNSXACSQLPGSLARAQLLMMTRIPDGIMYPFTLHSAMERWGTRSGPGIWSLS 90
Query: 620 DSLMVAFRYGIRLRSSSITMRPSGVAVL 703
SL+ AFRY RS+S+T+ V VL
Sbjct: 89 VSLIXAFRYAKLSRSASVTISFPLVIVL 6
>gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42e08 3', mRNA sequence
Length = 594
Score = 199 bits (430), Expect(3) = 5e-054
Identities = 73/136 (53%), Positives = 98/136 (72%)
Frame = -1 / -1
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+ P AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 516 IISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 337
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLA 319
RDP+ W+ EEF PERF ++G ++ G D +F+PFGAGRR+C G IA VE+MLA
Sbjct: 336 RDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLA 157
Query: 318 NLIYHFDWEMPAEMER 271
NL+ HFDWE+P + R
Sbjct: 156 NLVCHFDWELPLGVGR 109
Score = 133 bits (286), Expect = 2e-030
Identities = 66/129 (51%), Positives = 75/129 (58%)
Frame = +2 / +2
Query: 287 GISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKN 466
G SQSKW RFA++ ST A+ P ILRPAPNG N S P P S SG N
Sbjct: 125 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 304
Query: 467 SSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRY 646
SS SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R DS M A RY
Sbjct: 305 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRY 484
Query: 647 GIRLRSSSI 673
I S S+
Sbjct: 485 VILFMSVSL 511
Score = 28.1 bits (55), Expect(3) = 5e-054
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = -1 / -1
Query: 258 VDMSDQFGMTLRRTQKL 208
+DM++ FG+T+RR +KL
Sbjct: 102 IDMTEVFGLTVRRKEKL 52
Score = 23.5 bits (45), Expect(3) = 5e-054
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1 / -1
Query: 720 KLQKEVRTATPDGRMVMEE 664
KLQ EVR P G+ ++ E
Sbjct: 561 KLQDEVRGIVPQGQEIISE 505
>gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd1h15 3', mRNA sequence
Length = 586
Score = 197 bits (424), Expect(2) = 2e-053
Identities = 76/132 (57%), Positives = 96/132 (72%)
Frame = -1 / -3
Query: 642 LKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEF 463
LKA IKE++R+H PAP L+PH + DC INGYTIP+GTRVIVN+ A+ARDP+ W+ AEEF
Sbjct: 584 LKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEF 405
Query: 462 FPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPA 283
PERF++ G A +D G ++PFG GRRIC G FAIA +EIMLANL+YHFDW++P
Sbjct: 404 LPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPP 225
Query: 282 EMERTGAKVDMS 247
G + S
Sbjct: 224 GSAERGISMTES 189
Score = 140 bits (301), Expect = 2e-032
Identities = 72/133 (54%), Positives = 83/133 (62%)
Frame = +2 / +1
Query: 245 SDMSTLAPVRSISAGISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMST 424
+D L P + G QSKW R ASMIS AMA P ILRP PNG R P S
Sbjct: 187 NDSVILIPRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL*SM 366
Query: 425 SASRPCSRKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAG 604
+A+ P KRSG+NSSALSQ +GSLA A LTMTRVP GMV*P ++QS + + G R+GAG
Sbjct: 367 AAALPPCMKRSGRNSSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAG 546
Query: 605 GWMRMDSLMVAFR 643
R SLM AFR
Sbjct: 547 M*SRSVSLMTAFR 585
Score = 33.6 bits (67), Expect(2) = 2e-053
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1 / -3
Query: 258 VDMSDQFGMTLRRTQKLYLVPRIPK 184
+ M++ FG+T+ R KL LVP +P+
Sbjct: 206 ISMTESFGLTVHRKDKLLLVPLVPQ 132
>gb|AV912854.1|AV912854 AV912854 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j16 5', mRNA sequence
Length = 617
Score = 210 bits (452), Expect = 3e-053
Identities = 84/196 (42%), Positives = 124/196 (63%)
Frame = -1 / +3
Query: 990 ICAKAKGVSKRWDSLFNELLSEYALSGGKQGDHNSEDFVHLLLSLQKDYGLTTDNIKGIL 811
+CAKA+ V RW ++L+ + G DH +F+ +LLS Q++YGLT D+IK +L
Sbjct: 27 VCAKAERVRLRWADFLDKLIDDNMSKGKSTFDHKGGNFLDILLSAQEEYGLTRDHIKALL 206
Query: 810 VNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEEDLSRMPYLKAT 631
++F TS LE++++ELM ++ KLQ EVR+ P G+ + E +M YL+A
Sbjct: 207 TDVFFGLTNTSSNTLEFTLAELMRRPSLMGKLQDEVRSIVPLGQETVIETDIKMVYLRAV 386
Query: 630 IKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPER 451
IKES+R++P APFL PH + DC I GY +PAGT ++VN WA+ RD W+ AEE+ PER
Sbjct: 387 IKESLRLYPVAPFLPPHLAMGDCNIVGYMVPAGTHILVNVWAIGRDSNSWEDAEEYIPER 566
Query: 450 FLEQGRDAEVDMYGKD 403
F+++G V+ G D
Sbjct: 567 FIDEGSAVHVNFKGND 614
>gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38d04 3', mRNA sequence
Length = 552
Score = 193 bits (417), Expect(2) = 6e-053
Identities = 71/129 (55%), Positives = 92/129 (71%)
Frame = -1 / -1
Query: 657 SRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWD 478
+ M YL+ IKES+R+HP AP L PH DC I+GY +PAGTRV+VNAWA+ RDP+ W+
Sbjct: 552 NNMXYLRXVIKESLRLHPVAPLLAPHLXMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWE 373
Query: 477 KAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFD 298
EEF PERF ++G ++ G D +F+PFGAGRR+C G IA VE+MLANL+ HFD
Sbjct: 372 YPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFD 193
Query: 297 WEMPAEMER 271
WE+P + R
Sbjct: 192 WELPLGVGR 166
Score = 131 bits (280), Expect = 1e-029
Identities = 63/122 (51%), Positives = 71/122 (58%)
Frame = +2 / +2
Query: 287 GISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCSRKRSGKN 466
G SQSKW RFA++ ST A+ P ILRPAPNG N S P P S SG N
Sbjct: 182 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 361
Query: 467 SSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRY 646
SS SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R DS M RY
Sbjct: 362 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMXRCGARRGATGCSRSDSFMTXLRY 541
Query: 647 GI 652
I
Sbjct: 542 XI 547
Score = 35.4 bits (71), Expect(2) = 6e-053
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = -1 / -1
Query: 258 VDMSDQFGMTLRRTQKLYLVPR 193
+DM++ FG+T+RR +KL LVP+
Sbjct: 159 IDMTEVFGLTVRRKEKLLLVPK 94
>gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 3', mRNA sequence
Length = 655
Score = 205 bits (443), Expect = 5e-052
Identities = 74/137 (54%), Positives = 100/137 (72%)
Frame = -1 / -2
Query: 675 VMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALAR 496
V ++DL +PYLKA IKE++R+H P P ++PH S +C INGYTIP+GTR +N +A+ R
Sbjct: 603 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 424
Query: 495 DPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLAN 316
DP+ W+ EEF PERF+E G A +D G D ++ PFG+GRRIC G FA AT+++ML N
Sbjct: 423 DPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTN 244
Query: 315 LIYHFDWEMPAEMERTG 265
L+YHFDW++P E E G
Sbjct: 243 LMYHFDWKLPPESEEEG 193
Score = 120 bits (257), Expect = 2e-026
Identities = 67/138 (48%), Positives = 80/138 (57%)
Frame = +2 / +2
Query: 266 PVRSISAGISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCS 445
P S S G QSKW MRF SM VA+A + P ILRP PNG S P S +A+ P S
Sbjct: 194 PSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPPS 373
Query: 446 RKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDS 625
RSG NSS LSQ +GSL A L RVP G+V*P + S +E+ G +G G R S
Sbjct: 374 MNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVS 553
Query: 626 LMVAFRYGIRLRSSSITM 679
L+ AFR G RSS +T+
Sbjct: 554 LITAFR*GRPWRSSWVTV 607
>gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b09 3', mRNA sequence
Length = 618
Score = 205 bits (443), Expect = 5e-052
Identities = 74/137 (54%), Positives = 100/137 (72%)
Frame = -1 / -3
Query: 675 VMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALAR 496
V ++DL +PYLKA IKE++R+H P P ++PH S +C INGYTIP+GTR +N +A+ R
Sbjct: 604 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 425
Query: 495 DPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLAN 316
DP+ W+ EEF PERF+E G A +D G D ++ PFG+GRRIC G FA AT+++ML N
Sbjct: 424 DPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTN 245
Query: 315 LIYHFDWEMPAEMERTG 265
L+YHFDW++P E E G
Sbjct: 244 LMYHFDWKLPPESEEEG 194
Score = 120 bits (257), Expect = 2e-026
Identities = 67/138 (48%), Positives = 80/138 (57%)
Frame = +2 / +3
Query: 266 PVRSISAGISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSASRPCS 445
P S S G QSKW MRF SM VA+A + P ILRP PNG S P S +A+ P S
Sbjct: 195 PSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPPS 374
Query: 446 RKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDS 625
RSG NSS LSQ +GSL A L RVP G+V*P + S +E+ G +G G R S
Sbjct: 375 MNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVS 554
Query: 626 LMVAFRYGIRLRSSSITM 679
L+ AFR G RSS +T+
Sbjct: 555 LITAFR*GRPWRSSWVTV 608
>gb|BE602159.2|BE602159 HVSMEh0102M13f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0102M13f, mRNA sequence
Length = 654
Score = 113 bits (241), Expect(3) = 1e-051
Identities = 44/94 (46%), Positives = 67/94 (71%)
Frame = -1 / +1
Query: 1203 ASPGTALDMTELLGGYASDFVCRAVLGESHRKQGRNKLFRELTETSAALLGGFNVEDYFP 1024
A+ A+D++E++ YA+D VCRAV G+ R +GRNK+FREL E+++AL+GGFN+EDYFP
Sbjct: 343 AAASVAVDLSEVVNTYANDVVCRAVSGKFFRAEGRNKMFRELIESNSALVGGFNMEDYFP 522
Query: 1023 KLADVDLFLRIICAKAKGVSKRWDSLFNELLSEY 922
+LA V L R + + + +RWD L ++ E+
Sbjct: 523 RLAKVRLLNRFVRNNVETMHRRWDELLETIIREH 624
Score = 77.6 bits (163), Expect(3) = 1e-051
Identities = 31/60 (51%), Positives = 45/60 (75%)
Frame = -1 / +1
Query: 1545 HVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRY 1366
HVS R L +G +GL+L+ +G+VP +VVS+P A +AVLRT+DH+ ASRP + +AD + Y
Sbjct: 4 HVSLRSLSKTHGPDGLLLLHLGSVPNLVVSSPWATQAVLRTNDHLFASRPPSRIADNLLY 183
Score = 57.4 bits (119), Expect(3) = 2e-023
Identities = 30/84 (35%), Positives = 39/84 (46%)
Frame = +1 / -1
Query: 952 VPPLADALGLGADDPEEQVHVRQLREVVLHVEPAQEGGAGLRQLPEQLVPALLPVGLXXX 1131
VPP L + AD+P E+ ++RQ EVVLHV+P+ E L QL E +PA P L
Sbjct: 594 VPPPVHRLNVVADEPIEKTYLRQPWEVVLHVKPSDESRV*LDQLSEHFIPAFCPEELTRH 415
Query: 1132 XXXXXXXXXXXXXLRHVERRPRGR 1203
L V+ R R
Sbjct: 414 SAAHHVVGVSVNHLAQVDGHARRR 343
Score = 52.8 bits (109), Expect(3) = 1e-051
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = -1 / +1
Query: 1359 TDVAFAPYGEYWRTARKVVNTHLLSAKMVFS 1267
+D+AF+PYGE+WR ARK+V THL + K V S
Sbjct: 193 SDIAFSPYGEHWRQARKLVTTHLFTVKKVQS 285
Score = 51.5 bits (106), Expect(3) = 2e-023
Identities = 28/58 (48%), Positives = 32/58 (55%)
Frame = +2 / -2
Query: 1370 RMMSATGFRGRDASTWSCVRSTASAACGVDTTMVGTAPTCTSISPLWPYLAWRSRKET 1543
R +SA GRDA+ WS VR TA A G DTT GT P S P P + R R+ET
Sbjct: 179 RRLSAILDGGRDANRWSFVRRTAWVAHGDDTTRFGTEPRWRSKRPSGP*VLERLRRET 6
Score = 39.1 bits (79), Expect(3) = 2e-023
Identities = 21/50 (42%), Positives = 23/50 (46%)
Frame = +1 / -1
Query: 1201 RLGGVADPGHHQAHXXXXXXXXGEDHLGAEQVRVDHLPRRAPVLAVRREG 1350
R G+ DP H D L E+VR D LPR PVLAV EG
Sbjct: 351 RRRGLTDPRDHHFDLLLTGVAERLDLLDREEVRGDELPRLPPVLAVGGEG 202
>gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 5', mRNA sequence
Length = 618
Score = 149 bits (320), Expect(3) = 1e-051
Identities = 54/102 (52%), Positives = 74/102 (72%)
Frame = -1 / +1
Query: 675 VMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALAR 496
V ++DL +PYLKA IKE++R+H P P ++PH S +C INGYTIP+GTR +N +A+ R
Sbjct: 313 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 492
Query: 495 DPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRR 370
DP+ W+ EEF PERF+E G A +D G D ++ PFG+GRR
Sbjct: 493 DPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRR 618
Score = 86.8 bits (183), Expect(2) = 7e-024
Identities = 49/103 (47%), Positives = 60/103 (58%)
Frame = +2 / -2
Query: 371 LRPAPNGTNRMSLPYMSTSASRPCSRKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV* 550
LRP PNG S P S +A+ P S RSG NSS LSQ +GSL A L RVP G+V*
Sbjct: 617 LRPDPNGKYWKSFPL*SMAAALPPSMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV* 438
Query: 551 PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRYGIRLRSSSITM 679
P + S +E+ G +G G R SL+ AFR G RSS +T+
Sbjct: 437 PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*GRPWRSSWVTV 309
Score = 63.4 bits (132), Expect(3) = 1e-051
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = -1 / +1
Query: 831 DNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEVRTATPDGRMVMEED 661
D+IK L+ MFEA +TS +VLEY+M LM N V+A LQ EVR+ P G+ + +D
Sbjct: 154 DHIKAQLLIMFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGKDTVTQD 324
Score = 45.1 bits (92), Expect(2) = 7e-024
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2 / -2
Query: 683 PSGVAVLTSFWSLARTWRLFISSLMEYSSTRNDVSMAASNMFTSMPLMLS 832
P G+ +LTS S+A T IS M YSST DVS+ ASNM ++ L+ S
Sbjct: 302 PLGMVLLTSACSMAMTRGFCISRTMAYSSTMVDVSVPASNMISN*ALIWS 153
Score = 30.9 bits (61), Expect(3) = 1e-051
Identities = 10/16 (62%), Positives = 15/16 (93%)
Frame = -1 / +3
Query: 882 DFVHLLLSLQKDYGLT 835
DF+H+LLS+Q++Y LT
Sbjct: 102 DFIHVLLSVQQEYNLT 149
>gb|BJ463196.1|BJ463196 BJ463196 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags26d07 5', mRNA sequence
Length = 578
Score = 115 bits (245), Expect(3) = 1e-051
Identities = 43/69 (62%), Positives = 57/69 (82%)
Frame = -1 / +2
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
MV+E+DL+ + YLKA IKE++R+H PAP L+PH + DC INGYTIP+GTRVIVN+ A+A
Sbjct: 371 MVIEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIA 550
Query: 498 RDPTCWDKA 472
RDP+ W+ A
Sbjct: 551 RDPSSWESA 577
Score = 88.6 bits (187), Expect(3) = 1e-051
Identities = 35/74 (47%), Positives = 54/74 (72%)
Frame = -1 / +2
Query: 882 DFVHLLLSLQKDYGLTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAKLQKEV 703
D++H LLS+QK+Y LT + +K LV MF A +TS++V+EY+M+ LM N ++ KLQ EV
Sbjct: 164 DYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQAEV 343
Query: 702 RTATPDGRMVMEED 661
R++ P G+ ++ ED
Sbjct: 344 RSSIPKGKHMVIED 385
Score = 79.9 bits (168), Expect(2) = 6e-028
Identities = 42/69 (60%), Positives = 49/69 (71%)
Frame = +2 / -3
Query: 473 ALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMRMDSLMVAFRYGI 652
ALSQ +GSLA A LTMTRVP GMV*P ++QS + + G R+GAG R SLM AFR
Sbjct: 576 ALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR*AR 397
Query: 653 RLRSSSITM 679
LRSSS+TM
Sbjct: 396 WLRSSSMTM 370
Score = 65.7 bits (137), Expect(2) = 6e-028
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +1 / -2
Query: 661 VLLHHHAAVGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CLDGCFEHVHKYALDVIRGE 840
VL H +G PHL L LG +V V+H+ +HGV H *C+ +H H+ + D++ E
Sbjct: 385 VLYDHVFPLGYATPHLGL*LGHEVGVLHEPSHGVFHHYV*CVRASSKHDHQLSFDLLPCE 206
Query: 841 TVVFLQRQQEVHEV 882
V+FL R+Q V V
Sbjct: 205 VVLFLNRKQVVDVV 164
Score = 40.0 bits (81), Expect(3) = 1e-051
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -1 / +2
Query: 1029 FPKLADVDLFLRIICAKAKGVSKRWDSLFNELLSEY 922
FP+L +D+ ++C +A+ V+K WD L L+ E+
Sbjct: 20 FPELLKLDIIRWMVCGRARRVNKMWDDLLESLIHEH 127
>gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16e06 3', mRNA sequence
Length = 594
Score = 191 bits (411), Expect(2) = 1e-051
Identities = 73/128 (57%), Positives = 93/128 (72%)
Frame = -1 / -2
Query: 630 IKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPER 451
IKE++R+H PAP L+PH + DC INGYTIP+GTRVIVN+ A+ARDP+ W+ AEEF PER
Sbjct: 590 IKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPER 411
Query: 450 FLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMER 271
F++ G A +D G ++PFG GRRIC G FAIA +EIMLANL+YHFDW++P
Sbjct: 410 FMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPGSAE 231
Query: 270 TGAKVDMS 247
G + S
Sbjct: 230 RGISMTES 207
Score = 133 bits (286), Expect = 2e-030
Identities = 69/129 (53%), Positives = 80/129 (62%)
Frame = +2 / +1
Query: 245 SDMSTLAPVRSISAGISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMST 424
+D L P + G QSKW R ASMIS AMA P ILRP PNG R P S
Sbjct: 205 NDSVILIPRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL*SM 384
Query: 425 SASRPCSRKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAG 604
+A+ P KRSG+NSSALSQ +GSLA A LTMTRVP GMV*P ++QS + + G R+GAG
Sbjct: 385 AAALPPCMKRSGRNSSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAG 564
Query: 605 GWMRMDSLM 631
R SLM
Sbjct: 565 M*SRSVSLM 591
Score = 33.6 bits (67), Expect(2) = 1e-051
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1 / -2
Query: 258 VDMSDQFGMTLRRTQKLYLVPRIPK 184
+ M++ FG+T+ R KL LVP +P+
Sbjct: 224 ISMTESFGLTVHRKDKLLLVPLVPQ 150
>gb|AV918446.1|AV918446 AV918446 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21b10 3', mRNA sequence
Length = 604
Score = 190 bits (410), Expect(2) = 2e-051
Identities = 76/130 (58%), Positives = 94/130 (72%)
Frame = -1 / -2
Query: 642 LKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEF 463
LKA IKE++R+H PAP L+PH + DC INGYTIP+GTRVIVN+ A+ARDP+ W+ AEEF
Sbjct: 603 LKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEF 424
Query: 462 FPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPA 283
PERF++ G A +D G ++PFG GRRIC G FAIA +EIMLANL+YHF E
Sbjct: 423 LPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFILEAAT 244
Query: 282 EMERTGAKVD 253
+ TG K D
Sbjct: 243 GISGTGDKYD 214
Score = 142 bits (305), Expect = 5e-033
Identities = 72/131 (54%), Positives = 83/131 (63%)
Frame = +2 / +2
Query: 251 MSTLAPVRSISAGISQSKW*MRFASMISTVAMANVAPAQILRPAPNGTNRMSLPYMSTSA 430
+S L+PV I S KW R ASMIS AMA P ILRP PNG R P S +A
Sbjct: 212 LSYLSPVPLIPVAASSMKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL*SMAA 391
Query: 431 SRPCSRKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGW 610
+ P KRSG+NSSALSQ +GSLA A LTMTRVP GMV*P ++QS + + G R+GAG
Sbjct: 392 ALPPCMKRSGRNSSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM* 571
Query: 611 MRMDSLMVAFR 643
R SLM AFR
Sbjct: 572 SRSVSLMTAFR 604
Score = 33.6 bits (67), Expect(2) = 2e-051
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1 / -3
Query: 258 VDMSDQFGMTLRRTQKLYLVPRIPK 184
+ M++ FG+T+ R KL LVP +P+
Sbjct: 224 ISMTESFGLTVHRKDKLLLVPLVPQ 150
>gb|AV934105.1|AV934105 AV934105 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 5', mRNA sequence
Length = 544
Score = 134 bits (288), Expect(2) = 3e-051
Identities = 48/92 (52%), Positives = 66/92 (71%)
Frame = -1 / +1
Query: 678 MVMEEDLSRMPYLKATIKESMRIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALA 499
++ E D++ M YL+A IKES+R+HP AP L PH + DC I+GY +PAGTRV+VNAWA+
Sbjct: 265 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 444
Query: 498 RDPTCWDKAEEFFPERFLEQGRDAEVDMYGKD 403
RDP+ W+ EEF PERF ++G ++ G D
Sbjct: 445 RDPSSWEYPEEFIPERFTDEGSTMHINFKGND 540
Score = 88.6 bits (187), Expect(2) = 3e-051
Identities = 34/78 (43%), Positives = 56/78 (71%)
Frame = -1 / +1
Query: 897 DHNSEDFVHLLLSLQKDYGLTTDNIKGILVNMFEAAIETSFLVLEYSMSELMNNRHVLAK 718
DH +DFV ++LS+Q++Y LT +++K +L ++F AI+TS VLE++++ELM H++ K
Sbjct: 43 DHKDDDFVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEK 222
Query: 717 LQKEVRTATPDGRMVMEE 664
LQ EVR P G+ ++ E
Sbjct: 223 LQDEVRGILPQGQEIISE 276
Score = 87.2 bits (184), Expect(2) = 1e-021
Identities = 42/79 (53%), Positives = 48/79 (60%)
Frame = +2 / -3
Query: 437 PCSRKRSGKNSSALSQHVGSLASAHALTMTRVPAGMV*PLISQSWVEKCGRRNGAGGWMR 616
P S SG NSS SQ +GSL AHALT TRVPAG + P + QS + +CG R GA G R
Sbjct: 506 PSSVNLSGMNSSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSR 327
Query: 617 MDSLMVAFRYGIRLRSSSI 673
DS M A RY I S S+
Sbjct: 326 SDSFMTALRYVILFMSVSL 270
Score = 37.3 bits (75), Expect(2) = 1e-021
Identities = 18/72 (25%), Positives = 38/72 (52%)
Frame = +1 / -2
Query: 682 AVGRRRPHLLLELGQDVAVVHQLAHGVLQHQE*CLDGCFEHVHKYALDVIRGETVVFLQR 861
++G PHL+L L V H+L+ G + *C+ + + + + V+ E+++ L R
Sbjct: 258 SLG*NTPHLIL*LFHHVWPPHELSQGEFKDVS*CVYRTKKDICEESFHVLSCESILLLDR 79
Query: 862 QQEVHEVFRVVV 897
+H++ +V+
Sbjct: 78 *HNIHKIVILVI 43
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 689,841,281
Number of Sequences: 312970
Number of extensions: 11146174
Number of successful extensions: 121388
Number of sequences better than 1.0e-020: 271
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 23310523038
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)