TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3106156.2.1
(1016 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ759822.1|BQ759822 EBpi05_SQ004_B16_R pistil, 8 DPA, no... 358 e-112
gb|BQ759816.1|BQ759816 EBpi05_SQ004_A16_R pistil, 8 DPA, no... 326 e-102
gb|AV928242.1|AV928242 AV928242 K. Sato unpublished cDNA li... 345 2e-099
gb|BG368552.1|BG368552 HVSMEi0019L05f Hordeum vulgare 20 DA... 340 2e-097
gb|BF627127.2|BF627127 HVSMEb0004A09f Hordeum vulgare seedl... 232 1e-096
gb|BJ462342.1|BJ462342 BJ462342 K. Sato unpublished cDNA li... 338 1e-094
gb|BJ467826.1|BJ467826 BJ467826 K. Sato unpublished cDNA li... 345 3e-094
gb|AV927421.1|AV927421 AV927421 K. Sato unpublished cDNA li... 336 5e-094
gb|BJ466593.1|BJ466593 BJ466593 K. Sato unpublished cDNA li... 319 5e-089
gb|BI956767.1|BI956767 HVSMEn0005D24f Hordeum vulgare rachi... 320 6e-087
gb|AV927437.1|AV927437 AV927437 K. Sato unpublished cDNA li... 320 6e-087
gb|CA022047.1|CA022047 HZ42A04r HZ Hordeum vulgare subsp. v... 264 4e-070
gb|BQ665583.1|BQ665583 HX04E07u HX Hordeum vulgare subsp. v... 258 3e-068
gb|BM374192.2|BM374192 EBma03_SQ003_O16_R maternal, 8 DPA, ... 251 4e-066
gb|BQ759817.1|BQ759817 EBpi05_SQ004_A17_R pistil, 8 DPA, no... 196 1e-064
gb|CA006313.1|CA006313 HU14I15u HU Hordeum vulgare subsp. v... 237 3e-064
gb|BF630195.2|BF630195 HVSMEb0008E12f Hordeum vulgare seedl... 227 6e-059
gb|BU975231.1|BU975231 HB30H20r BC Hordeum vulgare subsp. v... 143 4e-054
gb|BU996676.1|BU996676 HM14G05r HM Hordeum vulgare subsp. v... 192 6e-051
gb|BG367217.1|BG367217 HVSMEi0011F11f Hordeum vulgare 20 DA... 198 4e-050
gb|BQ759821.1|BQ759821 EBpi05_SQ004_B15 _R pistil, 8 DPA, n... 188 6e-047
gb|BE195440.3|BE195440 HVSMEh0089K10f Hordeum vulgare 5-45 ... 118 3e-043
gb|AL505573.1|AL505573 AL505573 Hordeum vulgare Barke roots... 117 4e-043
gb|BF255654.2|BF255654 HVSMEf0007H02f Hordeum vulgare seedl... 141 4e-042
gb|BJ454539.1|BJ454539 BJ454539 K. Sato unpublished cDNA li... 130 2e-034
gb|BU974311.1|BU974311 HB27I16r BC Hordeum vulgare subsp. v... 130 5e-033
gb|BU971800.1|BU971800 HB19L11r BC Hordeum vulgare subsp. v... 63 9e-032
gb|BJ463647.1|BJ463647 BJ463647 K. Sato unpublished cDNA li... 130 1e-029
gb|BE420919.1|BE420919 HWM003.H08 ITEC HWM Barley Leaf Libr... 66 8e-029
gb|BU975384.1|BU975384 HB31F04r BC Hordeum vulgare subsp. v... 66 3e-026
gb|BE558753.3|BE558753 HV_CEb0020E08f Hordeum vulgare seedl... 64 5e-026
gb|CA013313.1|CA013313 HT08A11r HT Hordeum vulgare subsp. v... 66 1e-025
gb|CA013080.1|CA013080 HT07F09r HT Hordeum vulgare subsp. v... 68 2e-025
gb|BU995681.1|BU995681 HM11A08r HM Hordeum vulgare subsp. v... 66 6e-025
gb|BU990717.1|BU990717 HF25N16r HF Hordeum vulgare subsp. v... 66 4e-024
gb|BJ463662.1|BJ463662 BJ463662 K. Sato unpublished cDNA li... 64 5e-024
gb|CA013755.1|CA013755 HT09G07r HT Hordeum vulgare subsp. v... 62 7e-024
gb|AV912136.1|AV912136 AV912136 K. Sato unpublished cDNA li... 109 2e-023
gb|AV936911.1|AV936911 AV936911 K. Sato unpublished cDNA li... 66 2e-022
gb|BM371846.2|BM371846 EBma08_SQ004_C16_R maternal, 28 DPA,... 60 7e-022
>gb|BQ759822.1|BQ759822 EBpi05_SQ004_B16_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_B16 5', mRNA sequence
Length = 646
Score = 358 bits (777), Expect(2) = e-112
Identities = 138/165 (83%), Positives = 154/165 (93%)
Frame = -1 / +1
Query: 773 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRD 594
RYFNVIGSDPEGRLGEAPRPELREHG+ISGACFDAA G+IPGLKV+GTDYPTADGTC+RD
Sbjct: 133 RYFNVIGSDPEGRLGEAPRPELREHGKISGACFDAASGIIPGLKVRGTDYPTADGTCVRD 312
Query: 593 YIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRP 414
YIDVTDLVDAHVKAL KAEP KVGIYNVGTG+GRSV EFV+ACKKATG IK++YL+RRP
Sbjct: 313 YIDVTDLVDAHVKALGKAEPNKVGIYNVGTGKGRSVKEFVEACKKATGATIKVDYLDRRP 492
Query: 413 GDYAEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHPRGYG 279
GDYAEVYS+P+KI ELNWTA +TDL+ESL+ AW+WQK+HP GYG
Sbjct: 493 GDYAEVYSNPSKIRDELNWTAQHTDLRESLATAWKWQKAHPGGYG 627
Score = 252 bits (545), Expect(2) = 2e-075
Identities = 120/165 (72%), Positives = 128/165 (77%)
Frame = +1 / -3
Query: 280 P*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVA 459
P P GC FCH A RLS RSV AVQ SS I G LYTSA*SPGL R S LM+ PVA
Sbjct: 626 PYPPGCAFCHFQAVARLSRRSVCWAVQFSSSRILDGLLYTSA*SPGLRSR*STLMVAPVA 447
Query: 460 FLQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPL 639
FL ASTNS T+ P PVPTL*+PT LGSAL A T*AST+SVTS+*SL VPSAVG*SVP
Sbjct: 446 FLHASTNSFTDLPFPVPTL*IPTLLGSALPRALT*ASTRSVTSM*SLTHVPSAVG*SVPR 267
Query: 640 TFNPGMTPNAASKQAPDIRPCSRSSGLGASPNLPSGSDPITLKYL 774
TF+PGM P+AASK AP+I PCSRSSGLGASP PSGSDPITLKYL
Sbjct: 266 TFSPGMIPDAASKHAPEIFPCSRSSGLGASPRRPSGSDPITLKYL 132
Score = 131 bits (280), Expect(2) = 5e-033
Identities = 71/167 (42%), Positives = 99/167 (59%)
Frame = -3 / +3
Query: 771 IFQCYWI*P*GKIR*GS*ARTSRAWSDIWGLL*CSIRSHSRIKG*RNRLSHS*WNLHKRL 592
I QC W+ P*G S A T+ AW D W + * SIR+HSR KG RN L + *WN+ K L
Sbjct: 135 ILQCDWVGP*GTPWGSSKA*TA*AWKDFWCVF*RSIRNHSRAKGSRNGLPYC*WNMRKGL 314
Query: 591 Y*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLS**VC*CLQEGNWGQHQN*VPQQKAR 412
+ CH *CSC+S+ A*+S L + +R +S VC +QEG+ HQ +P+ + R
Sbjct: 315 HRCH*SC*CSCQSSW*S*A*QSWDL*RRHGER*VSEGVCRSVQEGDRSDHQGRLPRPETR 494
Query: 411 RLCRSIQRPNKDKQGAQLDSSLYRSQREPISRMEVAKVASAWLRAKL 271
L RS+Q+P +D + A+LDS + REP +E+A+ A +R L
Sbjct: 495 GLRRSVQQPVQDPRRAELDSPTHGPPREPRDGLEMAEGAPGRIRVGL 635
Score = 121 bits (258), Expect(2) = 9e-032
Identities = 63/165 (38%), Positives = 92/165 (55%)
Frame = +3 / -2
Query: 279 PVATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNFDVDPSC 458
PV+ R+RLLP P AL E+ ++ CPV+L+ L VAV+F ++ VEV++ D
Sbjct: 627 PVSARVRLLPFPGRREALAEVRVLGCPVQLVADLGRVAVHFGVVPGSPVEVVDLDGRSGR 448
Query: 459 LLAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSF 638
LLA KL++* T +++++ +F RL + F MS YA SIS ++ S
Sbjct: 447 LLARFYKLLH*PTFPRADVIDPNFVRLSFTKSFDMSINKISDIYVVPYACSISSRVVRSS 268
Query: 639 NL*SWNDS*CCIKASPRYPTMLSKFWPXXXXXXXXXXXXNNIEIS 773
NL* WNDS*CC+K R +ML++F P N+IE+S
Sbjct: 267 NL*PWNDS*CCVKTRTRNLSMLTQFRPWSFPKASLRVRPNHIEVS 133
Score = 68.4 bits (143), Expect(2) = e-112
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = -1 / +1
Query: 938 EPDKMPITEATP*FPINPYGKAKKMAEDIIIDFSNSKGVDMAVM 807
EPD +PI E TP PINPYGKAKKM+ED+I+DFS + + ++
Sbjct: 1 EPDTLPIVETTPHIPINPYGKAKKMSEDMILDFSKKSNMAVMIL 132
Score = 50.6 bits (104), Expect(2) = 2e-075
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +1 / -3
Query: 835 FEKSIMISSAIFLAFPYGLIGN*GVASVIGILSG 936
FEKS ++SS IF A PYGLIG *GV S IG +SG
Sbjct: 104 FEKSRIMSSDIFFALPYGLIGM*GVVSTIGNVSG 3
Score = 36.3 bits (73), Expect(2) = 9e-032
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3 / -2
Query: 810 DSHVNSLRV*EIYYDILCHFLSFSIWIDRELRCGFCNRHLIWF 938
D H + +*EI +L H +IWIDR +R F NR + F
Sbjct: 129 DHHSHVRFL*EIKNHVLGHLFCLAIWIDRYVRSRFDNRQCVRF 1
Score = 30.4 bits (60), Expect(2) = 5e-033
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -3 / +3
Query: 924 AYYRSHTLVPYQSIWKS*ENGRGYHNRFLK 835
AY R+ + YQSIW+ ++ RG+ + FLK
Sbjct: 15 AYCRNDSSHTYQSIWQGKKDVRGHDS*FLK 104
>gb|BQ759816.1|BQ759816 EBpi05_SQ004_A16_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_A16 5', mRNA sequence
Length = 587
Score = 326 bits (706), Expect(2) = e-102
Identities = 128/151 (84%), Positives = 142/151 (94%)
Frame = -1 / +1
Query: 773 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRD 594
RYFNVIGSDPEGRLGEAPRPELREHG+ISGACFDAA G+IPGLKV+GTDYPTADGTC+RD
Sbjct: 133 RYFNVIGSDPEGRLGEAPRPELREHGKISGACFDAASGIIPGLKVRGTDYPTADGTCVRD 312
Query: 593 YIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRP 414
YIDVTDLVDAHVKAL KAEP KVGIYNVGTG+GRSV EFV+ACKKATG IK++YL+RRP
Sbjct: 313 YIDVTDLVDAHVKALGKAEPNKVGIYNVGTGKGRSVKEFVEACKKATGATIKVDYLDRRP 492
Query: 413 GDYAEVYSDPTKINKELNWTAHYTDLKESLS 321
GDYAEVYS+P+KI ELNWTA +TDL+ESL+
Sbjct: 493 GDYAEVYSNPSKIRDELNWTAQHTDLRESLA 585
Score = 231 bits (499), Expect(2) = 5e-068
Identities = 112/150 (74%), Positives = 120/150 (80%)
Frame = +1 / -1
Query: 325 RLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVAFLQASTNSLTERPLP 504
RLS RSV AVQ SS I G LYTSA*SPGL R S LM+ PVAFL ASTNS T+ P P
Sbjct: 581 RLSRRSVCWAVQFSSSRILDGLLYTSA*SPGLRSR*STLMVAPVAFLHASTNSFTDLPFP 402
Query: 505 VPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLTFNPGMTPNAASKQA 684
VPTL*+PT LGSAL A T*AST+SVTS+*SL VPSAVG*SVP TF+PGM P+AASK A
Sbjct: 401 VPTL*IPTLLGSALPRALT*ASTRSVTSM*SLTHVPSAVG*SVPRTFSPGMIPDAASKHA 222
Query: 685 PDIRPCSRSSGLGASPNLPSGSDPITLKYL 774
P+I PCSRSSGLGASP PSGSDPITLKYL
Sbjct: 221 PEIFPCSRSSGLGASPRRPSGSDPITLKYL 132
Score = 124 bits (266), Expect(2) = 1e-030
Identities = 66/149 (44%), Positives = 90/149 (60%)
Frame = -3 / +3
Query: 771 IFQCYWI*P*GKIR*GS*ARTSRAWSDIWGLL*CSIRSHSRIKG*RNRLSHS*WNLHKRL 592
I QC W+ P*G S A T+ AW D W + * SIR+HSR KG RN L + *WN+ K L
Sbjct: 135 ILQCDWVGP*GTPWGSSKA*TA*AWKDFWCVF*RSIRNHSRAKGSRNGLPYC*WNMRKGL 314
Query: 591 Y*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLS**VC*CLQEGNWGQHQN*VPQQKAR 412
+ CH *CSC+S+ A*+S L + +R +S VC +QEG+ HQ +P+ + R
Sbjct: 315 HRCH*SC*CSCQSSW*S*A*QSWDL*RRHGER*VSEGVCRSVQEGDRSDHQGRLPRPETR 494
Query: 411 RLCRSIQRPNKDKQGAQLDSSLYRSQREP 325
L RS+Q+P +D + A+LDS + REP
Sbjct: 495 GLRRSVQQPVQDPRRAELDSPTHGPPREP 581
Score = 108 bits (230), Expect(2) = 4e-027
Identities = 55/149 (36%), Positives = 82/149 (55%)
Frame = +3 / -3
Query: 327 ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNFDVDPSCLLAGINKLIN*ATSSC 506
AL E+ ++ CPV+L+ L VAV+F ++ VEV++ D LLA KL++* T
Sbjct: 579 ALAEVRVLGCPVQLVADLGRVAVHFGVVPGSPVEVVDLDGRSGRLLARFYKLLH*PTFPR 400
Query: 507 SNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSFNL*SWNDS*CCIKASP 686
+++++ +F RL + F MS YA SIS ++ S NL* WNDS*CC+K
Sbjct: 399 ADVIDPNFVRLSFTKSFDMSINKISDIYVVPYACSISSRVVRSSNL*PWNDS*CCVKTRT 220
Query: 687 RYPTMLSKFWPXXXXXXXXXXXXNNIEIS 773
R +ML++F P N+IE+S
Sbjct: 219 RNLSMLTQFRPWSFPKASLRVRPNHIEVS 133
Score = 67.0 bits (140), Expect(2) = e-102
Identities = 24/44 (54%), Positives = 33/44 (75%)
Frame = -1 / +1
Query: 938 EPDKMPITEATP*FPINPYGKAKKMAEDIIIDFSNSKGVDMAVM 807
EPD +PI + TP PINPYGKAKKM+ED+I+DFS + + ++
Sbjct: 1 EPDTLPIVQTTPHIPINPYGKAKKMSEDMILDFSKKSNMAVMIL 132
Score = 47.3 bits (97), Expect(2) = 5e-068
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +1 / -1
Query: 835 FEKSIMISSAIFLAFPYGLIGN*GVASVIGILSG 936
FEKS ++SS IF A PYGLIG *GV IG +SG
Sbjct: 104 FEKSRIMSSDIFFALPYGLIGM*GVVWTIGNVSG 3
Score = 33.6 bits (67), Expect(2) = 4e-027
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3 / -3
Query: 810 DSHVNSLRV*EIYYDILCHFLSFSIWIDRELRCGFCNRHLIWF 938
D H + +*EI +L H +IWIDR +R NR + F
Sbjct: 129 DHHSHVRFL*EIKNHVLGHLFCLAIWIDRYVRSRLDNRQCVRF 1
Score = 29.0 bits (57), Expect(2) = 1e-030
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2 / +2
Query: 937 NQIRCLLQKPHLSSLSIHMEKLRKWQRIS**ISQTRR 827
N CLL K L+ LSIHM + ++ R ISQ R
Sbjct: 2 NLTHCLLSKRLLTYLSIHMARQKRCPRT*FLISQRNR 112
>gb|AV928242.1|AV928242 AV928242 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27i15 3', mRNA sequence
Length = 678
Score = 345 bits (747), Expect(2) = 2e-099
Identities = 137/164 (83%), Positives = 148/164 (90%)
Frame = -1 / -1
Query: 773 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRD 594
RYFNVIGSDPEGRLGEAP PELREHGRISGACFDAALG+IPGLKVKGTDY T DGTC+RD
Sbjct: 615 RYFNVIGSDPEGRLGEAPPPELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTCVRD 436
Query: 593 YIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRP 414
YIDVTDLVDAHVKALNKAE KVGIYNVGTGRGRSV EFV+ACKKATGV+IK+ Y RRP
Sbjct: 435 YIDVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFVEACKKATGVDIKVHYFPRRP 256
Query: 413 GDYAEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHPRGY 282
GDYAEVYS+P +IN+ELNWTA +T+L+ESL VAW WQK H GY
Sbjct: 255 GDYAEVYSNPARINRELNWTAQHTELQESLRVAWTWQKKHRSGY 124
Score = 246 bits (531), Expect(2) = 1e-065
Identities = 118/164 (71%), Positives = 129/164 (78%)
Frame = +1 / +2
Query: 283 *PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVAF 462
*P C FCH+HAT RLS SV AVQ SS I G LYTSA*SPG + LM TPVAF
Sbjct: 125 *PLRCFFCHVHATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*WTLMSTPVAF 304
Query: 463 LQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLT 642
LQASTNS T+ PLPVPTL MPT SALLSAFT AST+SVTS+*SL QVPS V *SVPLT
Sbjct: 305 LQASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLT 484
Query: 643 FNPGMTPNAASKQAPDIRPCSRSSGLGASPNLPSGSDPITLKYL 774
F PG+ P+AASK APDIRPCSR+SG GASP+LPSGS+P+TLKYL
Sbjct: 485 FKPGIIPSAASKHAPDIRPCSRNSGGGASPSLPSGSEPMTLKYL 616
Score = 129 bits (276), Expect = 3e-029
Identities = 68/159 (42%), Positives = 95/159 (59%)
Frame = -3 / -3
Query: 771 IFQCYWI*P*GKIR*GS*ARTSRAWSDIWGLL*CSIRSHSRIKG*RNRLSHS*WNLHKRL 592
I Q + *P K *GS +RAW IW +L S R++ R +G R RL +S +L +RL
Sbjct: 613 ILQRHRF*PRRKTG*GSTT*IARAWPYIWRMLRRSTRNNPRFEGQRYRLRNSRRDLRERL 434
Query: 591 Y*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLS**VC*CLQEGNWGQHQN*VPQQKAR 412
+ CHR C ES QQG +S H+QCW+RKR +S VC LQEG+ +HQ + R
Sbjct: 433 HRCHRPGRCPRESAQQGGERQSWHIQCWHRKR*VSEGVCGSLQEGDRSRHQGPLLPAPPR 254
Query: 411 RLCRSIQRPNKDKQGAQLDSSLYRSQREPISRMEVAKVA 295
LC S+Q+P KD+ +LDS +R+ EP R+++A+ A
Sbjct: 253 *LCGSVQQPRKDQPRTKLDSPAHRTPGEPQGRVDMAEEA 137
Score = 124 bits (266), Expect = 7e-028
Identities = 60/144 (41%), Positives = 89/144 (61%)
Frame = +3 / +1
Query: 282 VATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNFDVDPSCL 461
+A + LLP P D AL E G++ CPV V C VAV+F I++ + EV++ DVD L
Sbjct: 124 IAAPVLLLPCPRDPEALLEFGVLGCPV*FAVDPCGVAVHFRIVTGAAREVVDLDVDSGRL 303
Query: 462 LAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSFN 641
LA +KL++* TSS +NIV A+F+ L LVE FH+ S+A + ++ +F+
Sbjct: 304 LASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVGTFD 483
Query: 642 L*SWNDS*CCIKASPRYPTMLSKF 713
L +W+ S*CC++A RY ML++F
Sbjct: 484 LQTWDYS*CCVEACARYTAMLAQF 555
Score = 38.2 bits (77), Expect(2) = 2e-099
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -1 / -1
Query: 863 AEDIIIDFSNSKGVDMAVMILR 798
AEDII+DFS S+ DM+VMILR
Sbjct: 678 AEDIILDFSKSRKSDMSVMILR 613
Score = 24.9 bits (48), Expect(2) = 1e-065
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 799 LKIMTAMSTPFEFEKSIMISS 861
L+I+T MS + EKS MISS
Sbjct: 614 LRIITDMSDFLDLEKSKMISS 676
>gb|BG368552.1|BG368552 HVSMEi0019L05f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0019L05f, mRNA sequence
Length = 618
Score = 340 bits (737), Expect(2) = 2e-097
Identities = 135/164 (82%), Positives = 147/164 (89%)
Frame = -1 / +2
Query: 773 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRD 594
RYFNVIGSDPEGRLGEAP PELREHGRISGACFDAALG+IPGLKVKGTDY T DGTC+RD
Sbjct: 80 RYFNVIGSDPEGRLGEAPPPELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTCVRD 259
Query: 593 YIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRP 414
YIDVTDLVDAHVKALNKAE KVGIYNVGTGRGRSV EFV+ACKKATGV+IK++Y RRP
Sbjct: 260 YIDVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFVEACKKATGVDIKVDYFPRRP 439
Query: 413 GDYAEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHPRGY 282
GDYAEVYS+P +IN+ELNWTA +T+L ESL W WQK+H GY
Sbjct: 440 GDYAEVYSNPARINRELNWTAQHTELPESLRGRWTWQKNHRNGY 571
Score = 238 bits (515), Expect = 3e-062
Identities = 114/158 (72%), Positives = 125/158 (79%)
Frame = +1 / -1
Query: 301 FCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVAFLQASTN 480
FCH+H RLS SV AVQ SS I G LYTSA*SPG + S LM TPVAFLQASTN
Sbjct: 552 FCHVHRPLRLSGSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*STLMSTPVAFLQASTN 373
Query: 481 SLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLTFNPGMT 660
S T+ PLPVPTL MPT SALLSAFT AST+SVTS+*SL QVPS V *SVPLTF PG+
Sbjct: 372 SFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTFKPGII 193
Query: 661 PNAASKQAPDIRPCSRSSGLGASPNLPSGSDPITLKYL 774
P+AASK APDIRPCSR+SG GASP+LPSGS+P+TLKYL
Sbjct: 192 PSAASKHAPDIRPCSRNSGGGASPSLPSGSEPMTLKYL 79
Score = 128 bits (274), Expect = 5e-029
Identities = 69/167 (41%), Positives = 98/167 (58%)
Frame = -3 / +1
Query: 801 KVRTFSSVA*IFQCYWI*P*GKIR*GS*ARTSRAWSDIWGLL*CSIRSHSRIKG*RNRLS 622
K++ S I Q + *P K *GS +RAW IW +L S R++ R +G R RL
Sbjct: 52 KIKHVSYDPEILQRHRF*PRRKTG*GSTT*IARAWPYIWRMLRRSTRNNPRFEGQRYRLR 231
Query: 621 HS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLS**VC*CLQEGNWGQH 442
+S +L +RL+ C+R C ES QQG +S H+QCW+RKR +S VC LQEG+ +H
Sbjct: 232 NSRRDLRERLHRCYRPGRCPRESAQQGGERQSWHIQCWHRKR*VSEGVCGSLQEGDRSRH 411
Query: 441 QN*VPQQKARRLCRSIQRPNKDKQGAQLDSSLYRSQREPISRMEVAK 301
Q + R LC S+Q+P KD+ +LDS +R+ REP +++AK
Sbjct: 412 QGRLLPAPPR*LCGSVQQPRKDQPRTKLDSPAHRTPREPQGSVDMAK 552
Score = 121 bits (259), Expect = 6e-027
Identities = 59/144 (40%), Positives = 89/144 (61%)
Frame = +3 / -3
Query: 282 VATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNFDVDPSCL 461
+A + LLP P AL+E G++ CPV V C VAV+F I++ + EV++ DVD L
Sbjct: 571 IAVPVVLLPCPPTPEALWEFGVLGCPV*FAVDPCGVAVHFRIVTGAAREVVDLDVDSGRL 392
Query: 462 LAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSFN 641
LA +KL++* TSS +NIV A+F+ L LVE FH+ S+A + ++ +F+
Sbjct: 391 LASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGNIDVISHASPVGSFVVGTFD 212
Query: 642 L*SWNDS*CCIKASPRYPTMLSKF 713
L +W+ S*CC++A RY ML++F
Sbjct: 211 LQTWDYS*CCVEACARYTAMLAQF 140
Score = 36.3 bits (73), Expect(2) = 2e-097
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -1 / +2
Query: 878 KAKKMAEDIIIDFSNSKGVDMAVMILR 798
K +K AED I++FS S+ +M+VMILR
Sbjct: 2 KPRKWAEDFILNFSKSRKSNMSVMILR 82
>gb|BF627127.2|BF627127 HVSMEb0004A09f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004A09f, mRNA sequence
Length = 751
Score = 232 bits (501), Expect(2) = 1e-096
Identities = 94/105 (89%), Positives = 98/105 (93%)
Frame = -1 / +2
Query: 773 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRD 594
RYFNVIGSDPEGRLGEAP PELREHGRISGACFDAALG+IPGLKVKGTDY T DGTC+RD
Sbjct: 377 RYFNVIGSDPEGRLGEAPPPELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTCVRD 556
Query: 593 YIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKK 459
YIDVTDLVDAHVKALNKAE KVGIYNVGTGR RSV EFV+ACK+
Sbjct: 557 YIDVTDLVDAHVKALNKAERGKVGIYNVGTGRSRSVKEFVEACKR 691
Score = 175 bits (376), Expect(2) = 5e-065
Identities = 80/104 (76%), Positives = 89/104 (85%)
Frame = +1 / -2
Query: 463 LQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLT 642
LQASTNS T+ LPVPTL MPT SALLSAFT AST+SVTS+*SL QVPS V *SVPLT
Sbjct: 687 LQASTNSFTDLLLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLT 508
Query: 643 FNPGMTPNAASKQAPDIRPCSRSSGLGASPNLPSGSDPITLKYL 774
F PG+ P+AASK APDIRPCSR+SG GASP+LPSGS+P+TLKYL
Sbjct: 507 FKPGIIPSAASKHAPDIRPCSRNSGGGASPSLPSGSEPMTLKYL 376
Score = 141 bits (303), Expect(2) = 1e-096
Identities = 57/73 (78%), Positives = 66/73 (90%)
Frame = -1 / +2
Query: 1016 TLLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP*FPINPYGKAKKMAEDIIIDFS 837
TL++LEAMA H V+TLIYSSTCATYGEP+KMP+TE TP FPINPYGKAKKMAED+I+DFS
Sbjct: 161 TLVVLEAMAMHNVKTLIYSSTCATYGEPEKMPMTEETPQFPINPYGKAKKMAEDVILDFS 340
Query: 836 NSKGVDMAVMILR 798
S+ DM+VMILR
Sbjct: 341 KSRKSDMSVMILR 379
Score = 93.6 bits (198), Expect(2) = 5e-065
Identities = 47/68 (69%), Positives = 53/68 (77%)
Frame = +1 / -2
Query: 799 LKIMTAMSTPFEFEKSIMISSAIFLAFPYGLIGN*GVASVIGILSGSP*VAHVLE*IRVW 978
L+I+T MS + EKS M SSAIFLA PYG +GN GV+SVIGI SGSP*VAHVLE*IRV
Sbjct: 378 LRIITDMSDFLDLEKSKMTSSAIFLALPYGFMGNWGVSSVIGIFSGSP*VAHVLE*IRVL 199
Query: 979 TP*DAIAS 1002
T A+AS
Sbjct: 198 TLCIAMAS 175
Score = 85.8 bits (181), Expect(2) = 2e-026
Identities = 47/104 (45%), Positives = 62/104 (59%)
Frame = -3 / +1
Query: 771 IFQCYWI*P*GKIR*GS*ARTSRAWSDIWGLL*CSIRSHSRIKG*RNRLSHS*WNLHKRL 592
I Q + *P K *GS +RAW IW +L S R++ R +G R RL +S +L +RL
Sbjct: 379 ILQRHRF*PRRKTG*GSTT*IARAWPYIWRMLRRSTRNNPRFEGQRYRLRNSRRDLRERL 558
Query: 591 Y*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLS**VC*CLQE 460
+ CHR C ES QQG +S H+QCW+RK+ +S VC LQE
Sbjct: 559 HRCHRPGRCPRESAQQGGERQSWHIQCWHRKK*VSEGVCGSLQE 690
Score = 74.8 bits (157), Expect(2) = 7e-024
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +3 / -1
Query: 462 LAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSFN 641
LA +KL++* TSS +NIV A+F+ L LVE FH+ S+A + ++ +F+
Sbjct: 688 LASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVGTFD 509
Query: 642 L*SWNDS*CCIKASPRYPTMLSKF 713
L +W+ S*CC++A RY ML++F
Sbjct: 508 LQTWDYS*CCVEACARYTAMLAQF 437
Score = 56.1 bits (116), Expect(2) = 7e-024
Identities = 25/64 (39%), Positives = 38/64 (59%)
Frame = +3 / -1
Query: 804 NHDSHVNSLRV*EIYYDILCHFLSFSIWIDRELRCGFCNRHLIWFSVGSTCTGVNKGLDS 983
+H+ HV + E+ DILCHFL +I + +L F +RHL+ F VG TC V++G +
Sbjct: 373 DHN*HV*FPGLGEVQNDILCHFLGLAIRVYGKLGSFFSHRHLLGFPVGGTCARVDQGFNI 194
Query: 984 MRCH 995
+ H
Sbjct: 193 VHRH 182
Score = 53.3 bits (110), Expect(2) = 2e-026
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = -3 / +1
Query: 975 NPYLLQYMCYLRRTR*DAYYRSHTLVPYQSIWKS*ENGRGYHNRFLKLEGS*HGCHD 805
NP LL +MC+LR TR DAY ++ V ++ +W+ ENGRG H L+++ H +D
Sbjct: 202 NPDLL*HMCHLRGTREDAYD*RNSPVSHKPVWQGQENGRGCHFGLLQVQEIRHVSYD 372
>gb|BJ462342.1|BJ462342 BJ462342 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak24n03 3', mRNA sequence
Length = 699
Score = 338 bits (733), Expect(2) = 1e-094
Identities = 138/151 (91%), Positives = 144/151 (95%)
Frame = -1 / -2
Query: 710 LREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPR 531
LREHGRISGACFDAALGVI GLKVKG DYPTADGTCIRDYIDVTDLVDAHVKALNKA+P
Sbjct: 698 LREHGRISGACFDAALGVISGLKVKGIDYPTADGTCIRDYIDVTDLVDAHVKALNKAKPS 519
Query: 530 KVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTA 351
KVGIYNVGTGRGRSV EFVDACK+ATGV+IKIEYL+RRPGDYAEV+SDPTKIN ELNWTA
Sbjct: 518 KVGIYNVGTGRGRSVKEFVDACKQATGVDIKIEYLSRRPGDYAEVFSDPTKINNELNWTA 339
Query: 350 HYTDLKESLSVAWRWQKSHPRGYGPN*I*PA 258
+TDLKESLSVAWRWQKSHPRGYG N*I*PA
Sbjct: 338 QHTDLKESLSVAWRWQKSHPRGYGAN*I*PA 246
Score = 293 bits (635), Expect(2) = 2e-079
Identities = 135/151 (89%), Positives = 139/151 (92%)
Frame = +1 / +1
Query: 259 AGYI*FGP*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSI 438
AGYI*F P*PRGCDFCHLHATDRLSLRSV *AVQLSSL I VGSL TSA*SPGLLLRYSI
Sbjct: 247 AGYI*FAP*PRGCDFCHLHATDRLSLRSVC*AVQLSSLLILVGSLNTSA*SPGLLLRYSI 426
Query: 439 LMLTPVAFLQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSA 618
LM TPVA LQASTNSLTERPLPVPTL*MPT LG ALLSAFT*AST+SVTS+*SLMQVPSA
Sbjct: 427 LMSTPVACLQASTNSLTERPLPVPTL*MPTLLGFALLSAFT*ASTRSVTSM*SLMQVPSA 606
Query: 619 VG*SVPLTFNPGMTPNAASKQAPDIRPCSRS 711
VG*S+PLTFNP MTP+AASK APDI PCSRS
Sbjct: 607 VG*SIPLTFNPEMTPSAASKHAPDILPCSRS 699
Score = 249 bits (538), Expect = 2e-065
Identities = 110/151 (72%), Positives = 124/151 (82%)
Frame = -3 / -1
Query: 711 TSRAWSDIWGLL*CSIRSHSRIKG*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA* 532
T+RAW +IW +L*CS RSH RI+G*RNRLS+S*WNLHKRL+*CHR S CSCESTQQG+A*
Sbjct: 699 TTRAWKNIWSML*CSTRSHFRIEG*RNRLSYS*WNLHKRLH*CHRSSRCSCESTQQGKA* 520
Query: 531 KSRHLQCWNRKRSLS**VC*CLQEGNWGQHQN*VPQQKARRLCRSIQRPNKDKQGAQLDS 352
S HLQCW+ KRSL * VC CLQ GN G HQN*VPQQ+ARRLC SIQ P +D+Q QLD
Sbjct: 519 *SWHLQCWHWKRSLR*GVCRCLQAGNRG*HQN*VPQQEARRLC*SIQ*PYQDQQRTQLDC 340
Query: 351 SLYRSQREPISRMEVAKVASAWLRAKLNIAC 259
S YRSQ +P+ RMEVAKVASA L KL+IAC
Sbjct: 339 STYRSQGKPVCRMEVAKVASAGLWGKLDIAC 247
Score = 226 bits (487), Expect = 2e-058
Identities = 100/149 (67%), Positives = 113/149 (75%)
Frame = +3 / +3
Query: 261 RLYLVWPVATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNF 440
RLYL+ P+A RMRLLPPPCD A EIG++S PVE +V L V YF I+SWP EVLNF
Sbjct: 249 RLYLICPIAPRMRLLPPPCDRQAFLEIGMLSSPVEFVVDLGRVTEYFSIVSWPPAEVLNF 428
Query: 441 DVDPSCLLAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISC 620
DV+P CLLAGI+KL+N ATSS +NIVNA+F+RLCLVECFHMS SYAGSISC
Sbjct: 429 DVNPGCLLAGIDKLLNGATSSSANIVNANFTRLCLVECFHMSIY*ICDINVVSYAGSISC 608
Query: 621 GIICSFNL*SWNDS*CCIKASPRYPTMLS 707
II SFNL S NDS*CCIKA RY +MLS
Sbjct: 609 RIIYSFNLQS*NDS*CCIKACSRYSSMLS 695
Score = 162 bits (348), Expect = 3e-039
Identities = 79/123 (64%), Positives = 86/123 (69%)
Frame = +2 / +2
Query: 260 QAIFSLARSHADATFATSMRLIGSL*DRYNELSS*APCLSLLGRCILLHNLLAFC*GTQF 439
QAI +L S ADATFATSMR G *DRY E SS* C S G IL H+LLA C*GTQF
Sbjct: 248 QAISNLPHSPADATFATSMRQTGFP*DRYVEQSS*VRC*SW*GH*ILQHSLLASC*GTQF 427
Query: 440 *C*PQLPSCRHQQTH*LSDLFLFQHCKCRLF*ALPC*VLSHEXXXXXXXXXXXXCRFHQL 619
*C P+LP+CRH+QT * SDLF QHCKC+L+*ALPC*VLSHE CRFHQL
Sbjct: 428 *CQPRLPACRHRQTP*RSDLFQCQHCKCQLY*ALPC*VLSHEHLLDL*HQCSLLCRFHQL 607
Query: 620 WDN 628
DN
Sbjct: 608 *DN 616
Score = 129 bits (277), Expect(2) = 5e-042
Identities = 64/99 (64%), Positives = 68/99 (68%)
Frame = -2 / -3
Query: 556 KHSTRQSLEKSAFTMLEQEEVAQLMSLLMPARRQLGSTSKLSTSTEGQEIMQKYTAXXXX 377
KHSTRQSL K AFTML EEVA L SL MPA RQ G TSKLSTS GQE M KY+
Sbjct: 544 KHSTRQSLVKLAFTMLALEEVAPLRSLSMPASRQPGLTSKLSTSAGGQETMLKYSVTLPR 365
Query: 376 XXXXXTGQLIIPISKRAYQSHGGGKSRIRVATGQTKYSL 260
TG L IPIS++A SHGGGKSRIR A GQ +YSL
Sbjct: 364 STTNSTGLLNIPISRKACLSHGGGKSRIRGAMGQIRYSL 248
Score = 62.0 bits (129), Expect(2) = 5e-042
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = -2 / -3
Query: 709 FESMVGYLGLALMQH*ESFQD*RLKEQIIPQLMEPA*E 596
+ESM YL ALMQH*ESFQD*RLKE II QLMEPA*E
Sbjct: 697 YESMEEYLEHALMQH*ESFQD*RLKE*IILQLMEPA*E 584
Score = 29.0 bits (57), Expect(2) = 1e-094
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3 / -2
Query: 237 VNTY*FFS*RYKILLRYSSKSVLRILLSLVLFISKVC 127
VNT *F S* Y+IL+ Y+ V L+ KVC
Sbjct: 224 VNTC*FCS*WYRILVLYTLCPVALFLICSFFCFQKVC 114
Score = 23.1 bits (44), Expect(2) = 2e-079
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2 / +1
Query: 194 SKILYL*LKN*YVLTI 241
+KILY *L+N +VLT+
Sbjct: 181 TKILYH*LQNQHVLTV 228
>gb|BJ467826.1|BJ467826 BJ467826 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29p06 3', mRNA sequence
Length = 658
Score = 345 bits (747), Expect = 3e-094
Identities = 137/164 (83%), Positives = 148/164 (90%)
Frame = -1 / -2
Query: 773 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRD 594
RYFNVIGSDPEGRLGEAP PELREHGRISGACFDAALG+IPGLKVKGTDY T DGTC+RD
Sbjct: 618 RYFNVIGSDPEGRLGEAPPPELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTCVRD 439
Query: 593 YIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRP 414
YIDVTDLVDAHVKALNKAE KVGIYNVGTGRGRSV EFV+ACKKATGV+IK+ Y RRP
Sbjct: 438 YIDVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFVEACKKATGVDIKVHYFPRRP 259
Query: 413 GDYAEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHPRGY 282
GDYAEVYS+P +IN+ELNWTA +T+L+ESL VAW WQK H GY
Sbjct: 258 GDYAEVYSNPARINRELNWTAQHTELQESLRVAWTWQKKHRSGY 127
Score = 246 bits (531), Expect = 2e-064
Identities = 118/164 (71%), Positives = 129/164 (78%)
Frame = +1 / +2
Query: 283 *PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVAF 462
*P C FCH+HAT RLS SV AVQ SS I G LYTSA*SPG + LM TPVAF
Sbjct: 128 *PLRCFFCHVHATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*WTLMSTPVAF 307
Query: 463 LQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLT 642
LQASTNS T+ PLPVPTL MPT SALLSAFT AST+SVTS+*SL QVPS V *SVPLT
Sbjct: 308 LQASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLT 487
Query: 643 FNPGMTPNAASKQAPDIRPCSRSSGLGASPNLPSGSDPITLKYL 774
F PG+ P+AASK APDIRPCSR+SG GASP+LPSGS+P+TLKYL
Sbjct: 488 FKPGIIPSAASKHAPDIRPCSRNSGGGASPSLPSGSEPMTLKYL 619
Score = 129 bits (276), Expect = 3e-029
Identities = 68/159 (42%), Positives = 95/159 (59%)
Frame = -3 / -1
Query: 771 IFQCYWI*P*GKIR*GS*ARTSRAWSDIWGLL*CSIRSHSRIKG*RNRLSHS*WNLHKRL 592
I Q + *P K *GS +RAW IW +L S R++ R +G R RL +S +L +RL
Sbjct: 616 ILQRHRF*PRRKTG*GSTT*IARAWPYIWRMLRRSTRNNPRFEGQRYRLRNSRRDLRERL 437
Query: 591 Y*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLS**VC*CLQEGNWGQHQN*VPQQKAR 412
+ CHR C ES QQG +S H+QCW+RKR +S VC LQEG+ +HQ + R
Sbjct: 436 HRCHRPGRCPRESAQQGGERQSWHIQCWHRKR*VSEGVCGSLQEGDRSRHQGPLLPAPPR 257
Query: 411 RLCRSIQRPNKDKQGAQLDSSLYRSQREPISRMEVAKVA 295
LC S+Q+P KD+ +LDS +R+ EP R+++A+ A
Sbjct: 256 *LCGSVQQPRKDQPRTKLDSPAHRTPGEPQGRVDMAEEA 140
Score = 124 bits (266), Expect = 7e-028
Identities = 60/144 (41%), Positives = 89/144 (61%)
Frame = +3 / +1
Query: 282 VATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNFDVDPSCL 461
+A + LLP P D AL E G++ CPV V C VAV+F I++ + EV++ DVD L
Sbjct: 127 IAAPVLLLPCPRDPEALLEFGVLGCPV*FAVDPCGVAVHFRIVTGAAREVVDLDVDSGRL 306
Query: 462 LAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSFN 641
LA +KL++* TSS +NIV A+F+ L LVE FH+ S+A + ++ +F+
Sbjct: 307 LASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVGTFD 486
Query: 642 L*SWNDS*CCIKASPRYPTMLSKF 713
L +W+ S*CC++A RY ML++F
Sbjct: 487 LQTWDYS*CCVEACARYTAMLAQF 558
>gb|AV927421.1|AV927421 AV927421 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2a02 3', mRNA sequence
Length = 691
Score = 336 bits (729), Expect(2) = 5e-094
Identities = 134/161 (83%), Positives = 145/161 (90%)
Frame = -1 / -1
Query: 764 NVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRDYID 585
NVIGSDPEGRLGEAP PELREHGRISGACFDAALG+IPGLKVKGTDY T DGTC+RDYID
Sbjct: 607 NVIGSDPEGRLGEAPPPELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTCVRDYID 428
Query: 584 VTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDY 405
VTDLVDAHVKALNKAE KVGIYNVGTGRGRSV EFV+ACKKATGV+IK+ Y RRPGDY
Sbjct: 427 VTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFVEACKKATGVDIKVHYFPRRPGDY 248
Query: 404 AEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHPRGY 282
AEVYS+P +IN+ELNWTA +T+L+ESL VAW WQK H GY
Sbjct: 247 AEVYSNPARINRELNWTAQHTELQESLRVAWTWQKKHRSGY 125
Score = 237 bits (512), Expect(2) = 5e-063
Identities = 114/162 (70%), Positives = 126/162 (77%)
Frame = +1 / +3
Query: 283 *PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVAF 462
*P C FCH+HAT RLS SV AVQ SS I G LYTSA*SPG + LM TPVAF
Sbjct: 126 *PLRCFFCHVHATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*WTLMSTPVAF 305
Query: 463 LQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLT 642
LQASTNS T+ PLPVPTL MPT SALLSAFT AST+SVTS+*SL QVPS V *SVPLT
Sbjct: 306 LQASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLT 485
Query: 643 FNPGMTPNAASKQAPDIRPCSRSSGLGASPNLPSGSDPITLK 768
F PG+ P+AASK APDIRPCSR+SG GASP+LPSGS+P+T +
Sbjct: 486 FKPGIIPSAASKHAPDIRPCSRNSGGGASPSLPSGSEPMTFE 611
Score = 128 bits (274), Expect(2) = 4e-030
Identities = 67/158 (42%), Positives = 95/158 (60%)
Frame = -3 / -3
Query: 768 FQCYWI*P*GKIR*GS*ARTSRAWSDIWGLL*CSIRSHSRIKG*RNRLSHS*WNLHKRLY 589
F+ + *P K *GS +RAW IW +L S R++ R +G R RL +S +L +RL+
Sbjct: 611 FKRHRF*PRRKTG*GSTT*IARAWPYIWRMLRRSTRNNPRFEGQRYRLRNSRRDLRERLH 432
Query: 588 *CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLS**VC*CLQEGNWGQHQN*VPQQKARR 409
CHR C ES QQG +S H+QCW+RKR +S VC LQEG+ +HQ + R
Sbjct: 431 RCHRPGRCPRESAQQGGERQSWHIQCWHRKR*VSEGVCGSLQEGDRSRHQGPLLPAPPR* 252
Query: 408 LCRSIQRPNKDKQGAQLDSSLYRSQREPISRMEVAKVA 295
LC S+Q+P KD+ +LDS +R+ EP R+++A+ A
Sbjct: 251 LCGSVQQPRKDQPRTKLDSPAHRTPGEPQGRVDMAEEA 138
Score = 124 bits (266), Expect(2) = 3e-029
Identities = 60/144 (41%), Positives = 89/144 (61%)
Frame = +3 / +2
Query: 282 VATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNFDVDPSCL 461
+A + LLP P D AL E G++ CPV V C VAV+F I++ + EV++ DVD L
Sbjct: 125 IAAPVLLLPCPRDPEALLEFGVLGCPV*FAVDPCGVAVHFRIVTGAAREVVDLDVDSGRL 304
Query: 462 LAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSFN 641
LA +KL++* TSS +NIV A+F+ L LVE FH+ S+A + ++ +F+
Sbjct: 305 LASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVGTFD 484
Query: 642 L*SWNDS*CCIKASPRYPTMLSKF 713
L +W+ S*CC++A RY ML++F
Sbjct: 485 LQTWDYS*CCVEACARYTAMLAQF 556
Score = 28.6 bits (56), Expect(2) = 5e-094
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 872 KKMAEDIIIDFS 837
KKMAEDII+DFS
Sbjct: 690 KKMAEDIILDFS 655
Score = 24.4 bits (47), Expect(2) = 5e-063
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1 / +2
Query: 835 FEKSIMISSAIFL 873
+EKS MISSAIFL
Sbjct: 653 WEKSKMISSAIFL 691
Score = 24.0 bits (46), Expect(2) = 3e-029
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 840 EIYYDILCHFL 872
E+ DILCHFL
Sbjct: 658 EVQNDILCHFL 690
Score = 23.5 bits (45), Expect(2) = 4e-030
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3 / -1
Query: 870 ENGRGYHNRFLKLEGS 823
ENGRGYH L G+
Sbjct: 688 ENGRGYHFGLLPSPGN 641
>gb|BJ466593.1|BJ466593 BJ466593 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32o13 3', mRNA sequence
Length = 678
Score = 319 bits (692), Expect(2) = 5e-089
Identities = 130/143 (90%), Positives = 136/143 (95%)
Frame = -1 / -2
Query: 686 GACFDAALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVG 507
GACFDAALGVI GLKVKG DYPTADGTCIRDYIDVTDLVDAHVKALNKA+P KVGIYNVG
Sbjct: 677 GACFDAALGVISGLKVKGIDYPTADGTCIRDYIDVTDLVDAHVKALNKAKPSKVGIYNVG 498
Query: 506 TGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLKES 327
TGRGRSV EFVDACK+ATGV+IKIEYL+RRPGDYAEV+SDPTKIN ELNWTA +TDLKES
Sbjct: 497 TGRGRSVKEFVDACKQATGVDIKIEYLSRRPGDYAEVFSDPTKINNELNWTAQHTDLKES 318
Query: 326 LSVAWRWQKSHPRGYGPN*I*PA 258
LSVAWRWQKSHPRGYG N*I*PA
Sbjct: 317 LSVAWRWQKSHPRGYGAN*I*PA 249
Score = 276 bits (598), Expect(2) = 2e-074
Identities = 128/143 (89%), Positives = 132/143 (92%)
Frame = +1 / +1
Query: 259 AGYI*FGP*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSI 438
AGYI*F P*PRGCDFCHLHATDRLSLRSV *AVQLSSL I VGSL TSA*SPGLLLRYSI
Sbjct: 250 AGYI*FAP*PRGCDFCHLHATDRLSLRSVC*AVQLSSLLILVGSLNTSA*SPGLLLRYSI 429
Query: 439 LMLTPVAFLQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSA 618
LM TPVA LQASTNSLTERPLPVPTL*MPT LG ALLSAFT*AST+SVTS+*SLMQVPSA
Sbjct: 430 LMSTPVACLQASTNSLTERPLPVPTL*MPTLLGFALLSAFT*ASTRSVTSM*SLMQVPSA 609
Query: 619 VG*SVPLTFNPGMTPNAASKQAP 687
VG*S+PLTFNP MTP+AASK AP
Sbjct: 610 VG*SIPLTFNPEMTPSAASKHAP 678
Score = 235 bits (507), Expect = 4e-061
Identities = 105/143 (73%), Positives = 117/143 (81%)
Frame = -3 / -1
Query: 687 WGLL*CSIRSHSRIKG*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCW 508
W +L*CS RSH RI+G*RNRLS+S*WNLHKRL+*CHR S CSCESTQQG+A* S HLQCW
Sbjct: 678 WSML*CSTRSHFRIEG*RNRLSYS*WNLHKRLH*CHRSSRCSCESTQQGKA**SWHLQCW 499
Query: 507 NRKRSLS**VC*CLQEGNWGQHQN*VPQQKARRLCRSIQRPNKDKQGAQLDSSLYRSQRE 328
+ KRSL * VC CLQ GN G HQN*VPQQ+ARRLC SIQ P +D+Q QLD S YRSQ +
Sbjct: 498 HWKRSLR*GVCRCLQAGNRG*HQN*VPQQEARRLC*SIQ*PYQDQQRTQLDCSTYRSQGK 319
Query: 327 PISRMEVAKVASAWLRAKLNIAC 259
P+ RMEVAKVASA L KL+IAC
Sbjct: 318 PVCRMEVAKVASAGLWGKLDIAC 250
Score = 215 bits (464), Expect = 3e-055
Identities = 95/140 (67%), Positives = 107/140 (76%)
Frame = +3 / +3
Query: 261 RLYLVWPVATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNF 440
RLYL+ P+A RMRLLPPPCD A EIG++S PVE +V L V YF I+SWP EVLNF
Sbjct: 252 RLYLICPIAPRMRLLPPPCDRQAFLEIGMLSSPVEFVVDLGRVTEYFSIVSWPPAEVLNF 431
Query: 441 DVDPSCLLAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISC 620
DV+P CLLAGI+KL+N ATSS +NIVNA+F+RLCLVECFHMS SYAGSISC
Sbjct: 432 DVNPGCLLAGIDKLLNGATSSSANIVNANFTRLCLVECFHMSIY*ICDINVVSYAGSISC 611
Query: 621 GIICSFNL*SWNDS*CCIKA 680
II SFNL S NDS*CCIKA
Sbjct: 612 RIIYSFNLQS*NDS*CCIKA 671
Score = 162 bits (348), Expect = 3e-039
Identities = 79/123 (64%), Positives = 86/123 (69%)
Frame = +2 / +2
Query: 260 QAIFSLARSHADATFATSMRLIGSL*DRYNELSS*APCLSLLGRCILLHNLLAFC*GTQF 439
QAI +L S ADATFATSMR G *DRY E SS* C S G IL H+LLA C*GTQF
Sbjct: 251 QAISNLPHSPADATFATSMRQTGFP*DRYVEQSS*VRC*SW*GH*ILQHSLLASC*GTQF 430
Query: 440 *C*PQLPSCRHQQTH*LSDLFLFQHCKCRLF*ALPC*VLSHEXXXXXXXXXXXXCRFHQL 619
*C P+LP+CRH+QT * SDLF QHCKC+L+*ALPC*VLSHE CRFHQL
Sbjct: 431 *CQPRLPACRHRQTP*RSDLFQCQHCKCQLY*ALPC*VLSHEHLLDL*HQCSLLCRFHQL 610
Query: 620 WDN 628
DN
Sbjct: 611 *DN 619
Score = 129 bits (277), Expect(2) = 2e-039
Identities = 64/99 (64%), Positives = 68/99 (68%)
Frame = -2 / -3
Query: 556 KHSTRQSLEKSAFTMLEQEEVAQLMSLLMPARRQLGSTSKLSTSTEGQEIMQKYTAXXXX 377
KHSTRQSL K AFTML EEVA L SL MPA RQ G TSKLSTS GQE M KY+
Sbjct: 547 KHSTRQSLVKLAFTMLALEEVAPLRSLSMPASRQPGLTSKLSTSAGGQETMLKYSVTLPR 368
Query: 376 XXXXXTGQLIIPISKRAYQSHGGGKSRIRVATGQTKYSL 260
TG L IPIS++A SHGGGKSRIR A GQ +YSL
Sbjct: 367 STTNSTGLLNIPISRKACLSHGGGKSRIRGAMGQIRYSL 251
Score = 53.3 bits (110), Expect(2) = 2e-039
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = -2 / -3
Query: 679 ALMQH*ESFQD*RLKEQIIPQLMEPA*E 596
ALMQH*ESFQD*RLKE II QLMEPA*E
Sbjct: 670 ALMQH*ESFQD*RLKE*IILQLMEPA*E 587
Score = 29.0 bits (57), Expect(2) = 5e-089
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3 / -2
Query: 237 VNTY*FFS*RYKILLRYSSKSVLRILLSLVLFISKVC 127
VNT *F S* Y+IL+ Y+ V L+ KVC
Sbjct: 227 VNTC*FCS*WYRILVLYTLCPVALFLICSFFCFQKVC 117
Score = 23.1 bits (44), Expect(2) = 2e-074
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2 / +1
Query: 194 SKILYL*LKN*YVLTI 241
+KILY *L+N +VLT+
Sbjct: 184 TKILYH*LQNQHVLTV 231
>gb|BI956767.1|BI956767 HVSMEn0005D24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005D24f, mRNA sequence
Length = 1150
Score = 320 bits (694), Expect = 6e-087
Identities = 127/159 (79%), Positives = 142/159 (89%)
Frame = -1 / +1
Query: 767 FNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRDYI 588
FNVIGSDP GRLGEAP PELREHGRISGACF A LG+IP LKVKGTDY T DGTC+RDYI
Sbjct: 1 FNVIGSDPXGRLGEAPPPELREHGRISGACFHAXLGIIPRLKVKGTDYETPDGTCVRDYI 180
Query: 587 DVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGD 408
DVTDLVDAHVKALNKAE KVGIYNVGTGRGRS+ EFV+ACKKATGV+IK++Y RRPGD
Sbjct: 181 DVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSMKEFVEACKKATGVDIKVDYFPRRPGD 360
Query: 407 YAEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHP 291
YAEV+S+P +IN+ELNWTA +T+L+ESL+VAW WQK P
Sbjct: 361 YAEVFSNPARINRELNWTAQHTELQESLTVAWTWQKKTP 477
Score = 220 bits (474), Expect = 1e-056
Identities = 108/158 (68%), Positives = 119/158 (75%)
Frame = +1 / -3
Query: 292 GCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVAFLQA 471
G FCH+HAT RLS SV AVQ SS I G L TSA*SPG + S LM TPVAFLQA
Sbjct: 476 GVFFCHVHATVRLS*SSVCWAVQFSSRLILAGLLNTSA*SPGRRGK*STLMSTPVAFLQA 297
Query: 472 STNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLTFNP 651
STNS + PLPVPTL MPT SALLSAFT AST+SVTS+*SL QVPS V *SVPLTF
Sbjct: 296 STNSFIDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLTFKR 117
Query: 652 GMTPNAASKQAPDIRPCSRSSGLGASPNLPSGSDPITL 765
G+ P+ A K APDIRPCSR+SG GASP+LP GS+P+TL
Sbjct: 116 GIIPSXAWKHAPDIRPCSRNSGGGASPSLPXGSEPMTL 3
Score = 122 bits (261), Expect = 3e-027
Identities = 64/155 (41%), Positives = 91/155 (58%)
Frame = -3 / +3
Query: 765 QCYWI*P*GKIR*GS*ARTSRAWSDIWGLL*CSIRSHSRIKG*RNRLSHS*WNLHKRLY* 586
Q + *P K *GS +RAW IW +L R++ +G R RL +S +L +RL+
Sbjct: 3 QRHRF*PXRKTG*GSTT*IARAWPYIWRVLPRXTRNNPTFEGQRYRLRNSRRDLRERLHR 182
Query: 585 CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLS**VC*CLQEGNWGQHQN*VPQQKARRL 406
CHR C ES QQG +S H+QCW+RKR ++ VC LQEG+ +HQ + R L
Sbjct: 183 CHRPGRCPRESAQQGGERQSWHIQCWHRKR*VNERVCGSLQEGDRSRHQGRLLPAPPR*L 362
Query: 405 CRSIQRPNKDKQGAQLDSSLYRSQREPISRMEVAK 301
C S+Q+P KD+ +LDS +R+ EP R+++AK
Sbjct: 363 CGSVQQPRKDQPRTKLDSPAHRTSGEPHGRVDMAK 467
Score = 110 bits (235), Expect = 1e-023
Identities = 55/137 (40%), Positives = 82/137 (59%)
Frame = +3 / -2
Query: 303 LPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNFDVDPSCLLAGINKL 482
LP P D AL + G++ CPV V C VA +F I++ + EV++ DVD LLA +KL
Sbjct: 465 LPCPRDREALLKFGVLGCPV*FAVDPCGVAEHFRIVTGAAREVVDLDVDSGRLLASFHKL 286
Query: 483 IN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSFNL*SWNDS 662
+* TSS +NIV A+F+ L LVE FH+ S+A + ++ +F+L +W+ S
Sbjct: 285 FH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVGTFDLQTWDYS 106
Query: 663 *CCIKASPRYPTMLSKF 713
* C++A RY ML++F
Sbjct: 105 *XCVEARARYTAMLAQF 55
>gb|AV927437.1|AV927437 AV927437 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2b02 3', mRNA sequence
Length = 532
Score = 320 bits (694), Expect = 6e-087
Identities = 130/159 (81%), Positives = 141/159 (88%)
Frame = -1 / -2
Query: 758 IGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRDYIDVT 579
IGSDPEGRLGEAP ELREHGRISGACFDAALG+IPGLKVKGTDY T DGTC+RDYIDVT
Sbjct: 531 IGSDPEGRLGEAPPLELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTCVRDYIDVT 352
Query: 578 DLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAE 399
DLVDAHVKALNKAE KVGIYNVGTGRGRSV EFV+ACKKATGV+IK+ Y RRPGDYAE
Sbjct: 351 DLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFVEACKKATGVDIKVHYFPRRPGDYAE 172
Query: 398 VYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHPRGY 282
VYS+P +IN+ELNWTA +T+L+ESL VA WQK H GY
Sbjct: 171 VYSNPARINRELNWTAQHTELQESLRVA*TWQKKHRSGY 55
Score = 229 bits (494), Expect = 2e-059
Identities = 111/159 (69%), Positives = 123/159 (77%)
Frame = +1 / +2
Query: 283 *PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVAF 462
*P C FCH++AT RLS SV AVQ SS I G LYTSA*SPG + LM TPVAF
Sbjct: 56 *PLRCFFCHVYATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*WTLMSTPVAF 235
Query: 463 LQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLT 642
LQASTNS T+ PLPVPTL MPT SALLSAFT AST+SVTS+*SL QVPS V *SVPLT
Sbjct: 236 LQASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLT 415
Query: 643 FNPGMTPNAASKQAPDIRPCSRSSGLGASPNLPSGSDPI 759
F PG+ P+AASK APDIRPCSR+S GASP+LPSGS+P+
Sbjct: 416 FKPGIIPSAASKHAPDIRPCSRNSSGGASPSLPSGSEPM 532
Score = 126 bits (269), Expect = 3e-028
Identities = 66/152 (43%), Positives = 91/152 (59%)
Frame = -3 / -1
Query: 750 *P*GKIR*GS*ARTSRAWSDIWGLL*CSIRSHSRIKG*RNRLSHS*WNLHKRLY*CHRFS 571
*P K *GS +RAW IW +L S R++ R +G R RL +S +L +RL+ CHR
Sbjct: 523 *PRRKTG*GSTT*IARAWPYIWRMLRRSTRNNPRFEGQRYRLRNSRRDLRERLHRCHRPG 344
Query: 570 *CSCESTQQGRA*KSRHLQCWNRKRSLS**VC*CLQEGNWGQHQN*VPQQKARRLCRSIQ 391
C ES QQG +S H+QCW+RKR +S VC LQEG+ +HQ + R LC S+Q
Sbjct: 343 RCPRESAQQGGERQSWHIQCWHRKR*VSEGVCGSLQEGDRSRHQGPLLPAPPR*LCGSVQ 164
Query: 390 RPNKDKQGAQLDSSLYRSQREPISRMEVAKVA 295
+P KD+ +LDS +R+ EP R+ +A+ A
Sbjct: 163 QPRKDQPRTKLDSPAHRTPGEPQGRVNMAEEA 68
Score = 120 bits (256), Expect = 2e-026
Identities = 59/144 (40%), Positives = 88/144 (61%)
Frame = +3 / +1
Query: 282 VATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNFDVDPSCL 461
+A + LLP D AL E G++ CPV V C VAV+F I++ + EV++ DVD L
Sbjct: 55 IAAPVLLLPCLRDPEALLEFGVLGCPV*FAVDPCGVAVHFRIVTGAAREVVDLDVDSGRL 234
Query: 462 LAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSFN 641
LA +KL++* TSS +NIV A+F+ L LVE FH+ S+A + ++ +F+
Sbjct: 235 LASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVGTFD 414
Query: 642 L*SWNDS*CCIKASPRYPTMLSKF 713
L +W+ S*CC++A RY ML++F
Sbjct: 415 LQTWDYS*CCVEACARYTAMLAQF 486
>gb|CA022047.1|CA022047 HZ42A04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42A04
5-PRIME, mRNA sequence
Length = 533
Score = 264 bits (572), Expect = 4e-070
Identities = 104/131 (79%), Positives = 117/131 (89%)
Frame = -1 / +1
Query: 674 DAALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRG 495
+AALG+IPGLKVKGTDY T DGTC+RDYIDVTDLVDAHVKALNKAE KVGIYNVGTGRG
Sbjct: 7 EAALGIIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGRG 186
Query: 494 RSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLKESLSVA 315
RSV EFV+ACKKATGV+IK++Y RRPGDYAEVYS+P +IN+ELNWTA +T+L+ESL VA
Sbjct: 187 RSVKEFVEACKKATGVDIKVDYFPRRPGDYAEVYSNPARINRELNWTAQHTELQESLRVA 366
Query: 314 WRWQKSHPRGY 282
W WQK H GY
Sbjct: 367 WTWQKKHRSGY 399
Score = 182 bits (393), Expect = 2e-045
Identities = 92/131 (70%), Positives = 99/131 (75%)
Frame = +1 / -1
Query: 283 *PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVAF 462
*P C FCH+HAT RLS SV AVQ SS I G LYTSA*SPG + S LM TPVAF
Sbjct: 398 *PLRCFFCHVHATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*STLMSTPVAF 219
Query: 463 LQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLT 642
LQASTNS T+ PLPVPTL MPT SALLSAFT AST+SVTS+*SL QVPS V *SVPLT
Sbjct: 218 LQASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLT 39
Query: 643 FNPGMTPNAAS 675
F PG+ P+AAS
Sbjct: 38 FKPGIIPSAAS 6
Score = 112 bits (240), Expect = 3e-024
Identities = 55/125 (44%), Positives = 78/125 (62%)
Frame = -3 / +3
Query: 669 SIRSHSRIKG*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSL 490
S R++ R +G R RL +S +L +RL+ CHR C ES QQG +S H+QCW+RKR +
Sbjct: 12 STRNNPRFEGQRYRLRNSRRDLRERLHRCHRPGRCPRESAQQGGERQSWHIQCWHRKR*V 191
Query: 489 S**VC*CLQEGNWGQHQN*VPQQKARRLCRSIQRPNKDKQGAQLDSSLYRSQREPISRME 310
S VC LQEG+ +HQ + R LC S+Q+P KD+ +LDS +R+ EP R++
Sbjct: 192 SEGVCGSLQEGDRSRHQGRLLPAPPR*LCGSVQQPRKDQPRTKLDSPAHRTPGEPQGRVD 371
Query: 309 VAKVA 295
+AK A
Sbjct: 372 MAKEA 386
Score = 110 bits (234), Expect = 2e-023
Identities = 54/131 (41%), Positives = 80/131 (61%)
Frame = +3 / -3
Query: 282 VATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNFDVDPSCL 461
+A + LLP P D AL E G++ CPV V C VAV+F I++ + EV++ DVD L
Sbjct: 399 IAAPVLLLPCPRDPEALLEFGVLGCPV*FAVDPCGVAVHFRIVTGAAREVVDLDVDSGRL 220
Query: 462 LAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMSXXXXXXXXXXSYAGSISCGIICSFN 641
LA +KL++* TSS +NIV A+F+ L LVE FH+ S+A + ++ +F+
Sbjct: 219 LASFHKLLH*PTSSGANIVYANFASLRLVERFHVGIYQVGDIDVISHASPVGSFVVGTFD 40
Query: 642 L*SWNDS*CCI 674
L +W+ S*CC+
Sbjct: 39 LQTWDYS*CCL 7
>gb|BQ665583.1|BQ665583 HX04E07u HX Hordeum vulgare subsp. vulgare cDNA clone HX04E07
3-PRIME, mRNA sequence
Length = 516
Score = 258 bits (558), Expect = 3e-068
Identities = 101/127 (79%), Positives = 113/127 (88%)
Frame = -1 / -2
Query: 662 GVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVN 483
G+IPGLKVKGTDY T DGTC+RDYIDVTDLVDAHVKALNKAE KVGIYNVGTGRGRSV
Sbjct: 515 GIIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVK 336
Query: 482 EFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQ 303
EFV+ACKKATGV+IK++Y RRPGDYAEVYS+P +IN+ELNWTA +T+L+ESL VAW WQ
Sbjct: 335 EFVEACKKATGVDIKVDYFPRRPGDYAEVYSNPARINRELNWTAQHTELQESLRVAWTWQ 156
Query: 302 KSHPRGY 282
K H GY
Sbjct: 155 KKHRSGY 135
Score = 177 bits (380), Expect = 1e-043
Identities = 89/127 (70%), Positives = 95/127 (74%)
Frame = +1 / +1
Query: 283 *PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVAF 462
*P C FCH+HAT RLS SV AVQ SS I G LYTSA*SPG + S LM TPVAF
Sbjct: 136 *PLRCFFCHVHATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*STLMSTPVAF 315
Query: 463 LQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLT 642
LQASTNS T+ PLPVPTL MPT SALLSAFT AST+SVTS+*SL QVPS V *SVPLT
Sbjct: 316 LQASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLT 495
Query: 643 FNPGMTP 663
F PG+ P
Sbjct: 496 FKPGIIP 516
Score = 111 bits (237), Expect = 7e-024
Identities = 54/123 (43%), Positives = 77/123 (62%)
Frame = -3 / -1
Query: 663 RSHSRIKG*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLS* 484
R++ R +G R RL +S +L +RL+ CHR C ES QQG +S H+QCW+RKR +S
Sbjct: 516 RNNPRFEGQRYRLRNSRRDLRERLHRCHRPGRCPRESAQQGGERQSWHIQCWHRKR*VSE 337
Query: 483 *VC*CLQEGNWGQHQN*VPQQKARRLCRSIQRPNKDKQGAQLDSSLYRSQREPISRMEVA 304
VC LQEG+ +HQ + R LC S+Q+P KD+ +LDS +R+ EP R+++A
Sbjct: 336 GVCGSLQEGDRSRHQGRLLPAPPR*LCGSVQQPRKDQPRTKLDSPAHRTPGEPQGRVDMA 157
Query: 303 KVA 295
K A
Sbjct: 156 KEA 148
>gb|BM374192.2|BM374192 EBma03_SQ003_O16_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_O16 5', mRNA sequence
Length = 526
Score = 251 bits (543), Expect = 4e-066
Identities = 99/124 (79%), Positives = 109/124 (87%)
Frame = -1 / +2
Query: 653 PGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFV 474
PGLKVKGTDY T DGTC+RDYIDVTDLVDAHVKALNKAE KVGIYNVGTGRGRSV EFV
Sbjct: 2 PGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFV 181
Query: 473 DACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSH 294
+ACKKATGV+IK+ Y RRPGDYAEVYS+P +IN+ELNWTA +T+L+ESL VAW WQK H
Sbjct: 182 EACKKATGVDIKVHYFPRRPGDYAEVYSNPARINRELNWTAQHTELQESLRVAWTWQKKH 361
Query: 293 PRGY 282
GY
Sbjct: 362 RSGY 373
Score = 170 bits (366), Expect = 1e-041
Identities = 87/124 (70%), Positives = 92/124 (74%)
Frame = +1 / -2
Query: 283 *PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVAF 462
*P C FCH+HAT RLS SV AVQ SS I G LYTSA*SPG + LM TPVAF
Sbjct: 372 *PLRCFFCHVHATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*WTLMSTPVAF 193
Query: 463 LQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLT 642
LQASTNS T+ PLPVPTL MPT SALLSAFT AST+SVTS+*SL QVPS V *SVPLT
Sbjct: 192 LQASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGVS*SVPLT 13
Query: 643 FNPG 654
F PG
Sbjct: 12 FKPG 1
Score = 106 bits (227), Expect = 2e-022
Identities = 52/119 (43%), Positives = 74/119 (62%)
Frame = -3 / +1
Query: 651 RIKG*RNRLSHS*WNLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLS**VC* 472
R +G R RL +S +L +RL+ CHR C ES QQG +S H+QCW+RKR +S VC
Sbjct: 4 RFEGQRYRLRNSRRDLRERLHRCHRPGRCPRESAQQGGERQSWHIQCWHRKR*VSEGVCG 183
Query: 471 CLQEGNWGQHQN*VPQQKARRLCRSIQRPNKDKQGAQLDSSLYRSQREPISRMEVAKVA 295
LQEG+ +HQ + R LC S+Q+P KD+ +LDS +R+ EP R+++A+ A
Sbjct: 184 SLQEGDRSRHQGPLLPAPPR*LCGSVQQPRKDQPRTKLDSPAHRTPGEPQGRVDMAEEA 360
>gb|BQ759817.1|BQ759817 EBpi05_SQ004_A17_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_A17 5', mRNA sequence
Length = 430
Score = 196 bits (422), Expect(2) = 1e-064
Identities = 78/92 (84%), Positives = 83/92 (90%)
Frame = -1 / +1
Query: 773 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRD 594
RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAA G+IPGLKV+GTDYPTADGTC+RD
Sbjct: 133 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAASGIIPGLKVRGTDYPTADGTCVRD 312
Query: 593 YIDVTDLVDAHVKALNKAEPRKVGIYNVGTGR 498
YIDVTDLVDAHVKAL KAEP K+G G+
Sbjct: 313 YIDVTDLVDAHVKALGKAEPTKLGSITSARGK 408
Score = 147 bits (316), Expect(3) = 5e-050
Identities = 66/84 (78%), Positives = 72/84 (85%)
Frame = +1 / -3
Query: 523 PTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLTFNPGMTPNAASKQAPDIRPC 702
P F+GSAL A T*AST+SVTS+*SL VPSAVG*SVP TF+PGM P+AASK AP+I PC
Sbjct: 383 PNFVGSALPRALT*ASTRSVTSM*SLTHVPSAVG*SVPRTFSPGMIPDAASKHAPEILPC 204
Query: 703 SRSSGLGASPNLPSGSDPITLKYL 774
SRSSGLGASP PSGSDPITLKYL
Sbjct: 203 SRSSGLGASPRRPSGSDPITLKYL 132
Score = 82.2 bits (173), Expect(3) = 6e-027
Identities = 38/74 (51%), Positives = 47/74 (63%)
Frame = -3 / +3
Query: 771 IFQCYWI*P*GKIR*GS*ARTSRAWSDIWGLL*CSIRSHSRIKG*RNRLSHS*WNLHKRL 592
I QC W+ P*G S A T+ AW D W + * SIR+HSR KG RN L + *WN+ K L
Sbjct: 135 ILQCDWVGP*GTPWGSSKA*TA*AWKDFWCVF*RSIRNHSRAKGSRNGLPYC*WNMRKGL 314
Query: 591 Y*CHRFS*CSCEST 550
+ CH *CSC+S+
Sbjct: 315 HRCH*SC*CSCQSS 356
Score = 71.2 bits (149), Expect(2) = 1e-064
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = -1 / +1
Query: 938 EPDKMPITEATP*FPINPYGKAKKMAEDIIIDFSNSKGVDMAVM 807
EPD MPI E TP PINPYGKAKKM+EDII+DFS + + ++
Sbjct: 1 EPDTMPIVETTPQIPINPYGKAKKMSEDIILDFSKKSNMAVMIL 132
Score = 55.1 bits (114), Expect(3) = 5e-050
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = +1 / -3
Query: 835 FEKSIMISSAIFLAFPYGLIGN*GVASVIGILSG 936
FEKS M+SS IF A PYGLIG *GV S IGI+SG
Sbjct: 104 FEKSRMMSSDIFFALPYGLIGI*GVVSTIGIVSG 3
Score = 41.8 bits (85), Expect(3) = 6e-027
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1 / +3
Query: 530 KVGIYNVGTGRGRSVNEF 477
KVGIYNVGTG+GRSV EF
Sbjct: 375 KVGIYNVGTGKGRSVKEF 428
Score = 35.0 bits (70), Expect(3) = 6e-027
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3 / +3
Query: 927 DAYYRSHTLVPYQSIWKS*ENGRGYHNRFLK 835
+AY R+ + YQSIW+ ++ RG+H+ FLK
Sbjct: 12 NAYCRNDSSDTYQSIWQGKKDVRGHHS*FLK 104
Score = 34.1 bits (68), Expect(3) = 5e-050
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1 / -1
Query: 475 TNSLTERPLPVPTL*MPT 528
TNS T+ P PVPTL*+PT
Sbjct: 430 TNSFTDLPFPVPTL*IPT 377
>gb|CA006313.1|CA006313 HU14I15u HU Hordeum vulgare subsp. vulgare cDNA clone HU14I15
3-PRIME, mRNA sequence
Length = 550
Score = 237 bits (511), Expect(2) = 3e-064
Identities = 96/107 (89%), Positives = 102/107 (95%)
Frame = -1 / -1
Query: 578 DLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAE 399
DLVDAHVKALNKA+P KVGIYNVGTGRGRSV EFVDACK+ATGV+IKIEYL+RRPGDYAE
Sbjct: 550 DLVDAHVKALNKAKPSKVGIYNVGTGRGRSVKEFVDACKQATGVDIKIEYLSRRPGDYAE 371
Query: 398 VYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHPRGYGPN*I*PA 258
V+SDPTKIN ELNWTA +TDLKESLSVAWRWQKSHPRGYG N*I*PA
Sbjct: 370 VFSDPTKINNELNWTAQHTDLKESLSVAWRWQKSHPRGYGAN*I*PA 230
Score = 206 bits (445), Expect(2) = 2e-053
Identities = 96/106 (90%), Positives = 97/106 (91%)
Frame = +1 / +3
Query: 259 AGYI*FGP*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSI 438
AGYI*F P*PRGCDFCHLHATDRLSLRSV *AVQLSSL I VGSL TSA*SPGLLLRYSI
Sbjct: 231 AGYI*FAP*PRGCDFCHLHATDRLSLRSVC*AVQLSSLLILVGSLNTSA*SPGLLLRYSI 410
Query: 439 LMLTPVAFLQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTK 576
LM TPVA LQASTNSLTERPLPVPTL*MPT LG ALLSAFT*AST+
Sbjct: 411 LMSTPVACLQASTNSLTERPLPVPTL*MPTLLGFALLSAFT*ASTR 548
Score = 171 bits (368), Expect = 6e-042
Identities = 71/102 (69%), Positives = 83/102 (81%)
Frame = +3 / +2
Query: 261 RLYLVWPVATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNF 440
RLYL+ P+A RMRLLPPPCD A EIG++S PVE +V L V YF I+SWP EVLNF
Sbjct: 233 RLYLICPIAPRMRLLPPPCDRQAFLEIGMLSSPVEFVVDLGRVTEYFSIVSWPPAEVLNF 412
Query: 441 DVDPSCLLAGINKLIN*ATSSCSNIVNADFSRLCLVECFHMS 566
DV+P CLLAGI+KL+N ATSS +NIVNA+F+RLCLVECFHMS
Sbjct: 413 DVNPGCLLAGIDKLLNGATSSSANIVNANFTRLCLVECFHMS 538
Score = 162 bits (348), Expect = 3e-039
Identities = 74/103 (71%), Positives = 82/103 (79%)
Frame = -3 / -3
Query: 567 CSCESTQQGRA*KSRHLQCWNRKRSLS**VC*CLQEGNWGQHQN*VPQQKARRLCRSIQR 388
CSCESTQQG+A* S HLQCW+ KRSL * VC CLQ GN G HQN*VPQQ+ARRLC SIQ
Sbjct: 539 CSCESTQQGKA**SWHLQCWHWKRSLR*GVCRCLQAGNRG*HQN*VPQQEARRLC*SIQ* 360
Query: 387 PNKDKQGAQLDSSLYRSQREPISRMEVAKVASAWLRAKLNIAC 259
P +D+Q QLD S YRSQ +P+ RMEVAKVASA L KL+IAC
Sbjct: 359 PYQDQQRTQLDCSTYRSQGKPVCRMEVAKVASAGLWGKLDIAC 231
Score = 148 bits (318), Expect = 4e-035
Identities = 71/102 (69%), Positives = 78/102 (76%)
Frame = +2 / +1
Query: 260 QAIFSLARSHADATFATSMRLIGSL*DRYNELSS*APCLSLLGRCILLHNLLAFC*GTQF 439
QAI +L S ADATFATSMR G *DRY E SS* C S G IL H+LLA C*GTQF
Sbjct: 232 QAISNLPHSPADATFATSMRQTGFP*DRYVEQSS*VRC*SW*GH*ILQHSLLASC*GTQF 411
Query: 440 *C*PQLPSCRHQQTH*LSDLFLFQHCKCRLF*ALPC*VLSHE 565
*C P+LP+CRH+QT * SDLF QHCKC+L+*ALPC*VLSHE
Sbjct: 412 *CQPRLPACRHRQTP*RSDLFQCQHCKCQLY*ALPC*VLSHE 537
Score = 129 bits (277), Expect = 2e-029
Identities = 64/99 (64%), Positives = 68/99 (68%)
Frame = -2 / -2
Query: 556 KHSTRQSLEKSAFTMLEQEEVAQLMSLLMPARRQLGSTSKLSTSTEGQEIMQKYTAXXXX 377
KHSTRQSL K AFTML EEVA L SL MPA RQ G TSKLSTS GQE M KY+
Sbjct: 528 KHSTRQSLVKLAFTMLALEEVAPLRSLSMPASRQPGLTSKLSTSAGGQETMLKYSVTLPR 349
Query: 376 XXXXXTGQLIIPISKRAYQSHGGGKSRIRVATGQTKYSL 260
TG L IPIS++A SHGGGKSRIR A GQ +YSL
Sbjct: 348 STTNSTGLLNIPISRKACLSHGGGKSRIRGAMGQIRYSL 232
Score = 29.0 bits (57), Expect(2) = 3e-064
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3 / -1
Query: 237 VNTY*FFS*RYKILLRYSSKSVLRILLSLVLFISKVC 127
VNT *F S* Y+IL+ Y+ V L+ KVC
Sbjct: 208 VNTC*FCS*WYRILVLYTLCPVALFLICSFFCFQKVC 98
Score = 23.1 bits (44), Expect(2) = 2e-053
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2 / +3
Query: 194 SKILYL*LKN*YVLTI 241
+KILY *L+N +VLT+
Sbjct: 165 TKILYH*LQNQHVLTV 212
>gb|BF630195.2|BF630195 HVSMEb0008E12f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0008E12f, mRNA sequence
Length = 497
Score = 227 bits (491), Expect = 6e-059
Identities = 89/113 (78%), Positives = 100/113 (88%)
Frame = -1 / +2
Query: 620 TADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNI 441
T DGTC+RDYIDVTDLVDAHVKALNKAE KVGIYNVGTGRGRSV EFV+ACKKATGV+I
Sbjct: 8 TPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFVEACKKATGVDI 187
Query: 440 KIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHPRGY 282
K++Y RRPGDYAEVYS+P +IN+ELNWTA +T+L+ESL VAW WQK H GY
Sbjct: 188 KVDYFPRRPGDYAEVYSNPARINRELNWTAQHTELQESLRVAWTWQKKHRSGY 346
Score = 153 bits (329), Expect = 1e-036
Identities = 79/113 (69%), Positives = 84/113 (74%)
Frame = +1 / -3
Query: 283 *PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVAF 462
*P C FCH+HAT RLS SV AVQ SS I G LYTSA*SPG + S LM TPVAF
Sbjct: 345 *PLRCFFCHVHATLRLSWSSVCWAVQFSSRLILAGLLYTSA*SPGRRGK*STLMSTPVAF 166
Query: 463 LQASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAV 621
LQASTNS T+ PLPVPTL MPT SALLSAFT AST+SVTS+*SL QVPS V
Sbjct: 165 LQASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGV 7
Score = 100 bits (214), Expect = 1e-020
Identities = 47/105 (44%), Positives = 66/105 (62%)
Frame = -3 / +1
Query: 609 NLHKRLY*CHRFS*CSCESTQQGRA*KSRHLQCWNRKRSLS**VC*CLQEGNWGQHQN*V 430
+L +RL+ CHR C ES QQG +S H+QCW+RKR +S VC LQEG+ +HQ +
Sbjct: 19 DLRERLHRCHRPGRCPRESAQQGGERQSWHIQCWHRKR*VSEGVCGSLQEGDRSRHQGRL 198
Query: 429 PQQKARRLCRSIQRPNKDKQGAQLDSSLYRSQREPISRMEVAKVA 295
R LC S+Q+P KD+ +LDS +R+ EP R+++AK A
Sbjct: 199 LPAPPR*LCGSVQQPRKDQPRTKLDSPAHRTPGEPQGRVDMAKEA 333
>gb|BU975231.1|BU975231 HB30H20r BC Hordeum vulgare subsp. vulgare cDNA clone HB30H20
5-PRIME, mRNA sequence
Length = 479
Score = 143 bits (307), Expect(2) = 4e-054
Identities = 59/73 (80%), Positives = 66/73 (90%)
Frame = -1 / +1
Query: 1016 TLLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP*FPINPYGKAKKMAEDIIIDFS 837
TL++LEAMA H V+TLIYSSTCATYGEP+KMPITE TP FPINPYGKAKKMAEDII+DFS
Sbjct: 154 TLVVLEAMAMHNVKTLIYSSTCATYGEPEKMPITEETPQFPINPYGKAKKMAEDIILDFS 333
Query: 836 NSKGVDMAVMILR 798
S+ DM+VMILR
Sbjct: 334 KSRKSDMSVMILR 372
Score = 95.9 bits (203), Expect(2) = 7e-036
Identities = 48/68 (70%), Positives = 54/68 (79%)
Frame = +1 / -1
Query: 799 LKIMTAMSTPFEFEKSIMISSAIFLAFPYGLIGN*GVASVIGILSGSP*VAHVLE*IRVW 978
L+I+T MS + EKS MISSAIFLA PYG +GN GV+SVIGI SGSP*VAHVLE*IRV
Sbjct: 371 LRIITDMSDFLDLEKSKMISSAIFLALPYGFMGNWGVSSVIGIFSGSP*VAHVLE*IRVL 192
Query: 979 TP*DAIAS 1002
T A+AS
Sbjct: 191 TLCIAMAS 168
Score = 88.6 bits (187), Expect(2) = 4e-054
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = -1 / +1
Query: 773 RYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAA 666
RYFNVIGSDPEGRLGEAP PELREHGRISGACFDAA
Sbjct: 370 RYFNVIGSDPEGRLGEAPPPELREHGRISGACFDAA 477
Score = 75.3 bits (158), Expect(2) = 7e-036
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = +1 / -1
Query: 664 NAASKQAPDIRPCSRSSGLGASPNLPSGSDPITLKYL 774
+AASK APDIRPCSR+SG GASP+LPSGS+P+TLKYL
Sbjct: 479 SAASKHAPDIRPCSRNSGGGASPSLPSGSEPMTLKYL 369
>gb|BU996676.1|BU996676 HM14G05r HM Hordeum vulgare subsp. vulgare cDNA clone HM14G05
5-PRIME, mRNA sequence
Length = 536
Score = 192 bits (414), Expect(2) = 6e-051
Identities = 77/86 (89%), Positives = 82/86 (95%)
Frame = -1 / +1
Query: 515 NVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDL 336
NVGTGRGRSV EFVDACK+ATGV+IKIEYL+RRPGDYAEV+SDPTKIN ELNWTA +TDL
Sbjct: 13 NVGTGRGRSVKEFVDACKQATGVDIKIEYLSRRPGDYAEVFSDPTKINNELNWTAQHTDL 192
Query: 335 KESLSVAWRWQKSHPRGYGPN*I*PA 258
KESLSVAWRWQKSHPRGYG N*I*PA
Sbjct: 193 KESLSVAWRWQKSHPRGYGAN*I*PA 270
Score = 173 bits (372), Expect(3) = 2e-043
Identities = 79/86 (91%), Positives = 79/86 (91%)
Frame = +1 / -1
Query: 259 AGYI*FGP*PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSI 438
AGYI*F P*PRGCDFCHLHATDRLSLRSV *AVQLSSL I VGSL TSA*SPGLLLRYSI
Sbjct: 269 AGYI*FAP*PRGCDFCHLHATDRLSLRSVC*AVQLSSLLILVGSLNTSA*SPGLLLRYSI 90
Query: 439 LMLTPVAFLQASTNSLTERPLPVPTL 516
LM TPVA LQASTNSLTERPLPVPTL
Sbjct: 89 LMSTPVACLQASTNSLTERPLPVPTL 12
Score = 134 bits (287), Expect = 8e-031
Identities = 57/86 (66%), Positives = 67/86 (77%)
Frame = +3 / -3
Query: 261 RLYLVWPVATRMRLLPPPCD**ALFEIGIMSCPVELLVYLCWVAVYFCIISWPSVEVLNF 440
RLYL+ P+A RMRLLPPPCD A EIG++S PVE +V L V YF I+SWP EVLNF
Sbjct: 267 RLYLICPIAPRMRLLPPPCDRQAFLEIGMLSSPVEFVVDLGRVTEYFSIVSWPPAEVLNF 88
Query: 441 DVDPSCLLAGINKLIN*ATSSCSNIV 518
DV+P CLLAGI+KL+N ATSS +NIV
Sbjct: 87 DVNPGCLLAGIDKLLNGATSSSANIV 10
Score = 131 bits (280), Expect = 8e-030
Identities = 60/86 (69%), Positives = 67/86 (77%)
Frame = -3 / +3
Query: 516 QCWNRKRSLS**VC*CLQEGNWGQHQN*VPQQKARRLCRSIQRPNKDKQGAQLDSSLYRS 337
QCW+ KRSL * VC CLQ GN G HQN*VPQQ+ARRLC SIQ P +D+Q QLD S YRS
Sbjct: 12 QCWHWKRSLR*GVCRCLQAGNRG*HQN*VPQQEARRLC*SIQ*PYQDQQRTQLDCSTYRS 191
Query: 336 QREPISRMEVAKVASAWLRAKLNIAC 259
Q +P+ RMEVAKVASA L KL+IAC
Sbjct: 192 QGKPVCRMEVAKVASAGLWGKLDIAC 269
Score = 115 bits (245), Expect = 5e-025
Identities = 57/86 (66%), Positives = 62/86 (72%)
Frame = +2 / -2
Query: 260 QAIFSLARSHADATFATSMRLIGSL*DRYNELSS*APCLSLLGRCILLHNLLAFC*GTQF 439
QAI +L S ADATFATSMR G *DRY E SS* C S G IL H+LLA C*GTQF
Sbjct: 268 QAISNLPHSPADATFATSMRQTGFP*DRYVEQSS*VRC*SW*GH*ILQHSLLASC*GTQF 89
Query: 440 *C*PQLPSCRHQQTH*LSDLFLFQHC 517
*C P+LP+CRH+QT * SDLF QHC
Sbjct: 88 *CQPRLPACRHRQTP*RSDLFQCQHC 11
Score = 106 bits (226), Expect = 2e-022
Identities = 53/86 (61%), Positives = 57/86 (66%)
Frame = -2 / +2
Query: 517 TMLEQEEVAQLMSLLMPARRQLGSTSKLSTSTEGQEIMQKYTAXXXXXXXXXTGQLIIPI 338
TML EEVA L SL MPA RQ G TSKLSTS GQE M KY+ TG L IPI
Sbjct: 11 TMLALEEVAPLRSLSMPASRQPGLTSKLSTSAGGQETMLKYSVTLPRSTTNSTGLLNIPI 190
Query: 337 SKRAYQSHGGGKSRIRVATGQTKYSL 260
S++A SHGGGKSRIR A GQ +YSL
Sbjct: 191 SRKACLSHGGGKSRIRGAMGQIRYSL 268
Score = 29.0 bits (57), Expect(2) = 6e-051
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3 / +1
Query: 237 VNTY*FFS*RYKILLRYSSKSVLRILLSLVLFISKVC 127
VNT *F S* Y+IL+ Y+ V L+ KVC
Sbjct: 292 VNTC*FCS*WYRILVLYTLCPVALFLICSFFCFQKVC 402
Score = 23.1 bits (44), Expect(3) = 2e-043
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2 / -1
Query: 194 SKILYL*LKN*YVLTI 241
+KILY *L+N +VLT+
Sbjct: 335 TKILYH*LQNQHVLTV 288
Score = 21.7 bits (41), Expect(3) = 2e-043
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1 / -2
Query: 88 SSKSPFMFLLAKNANF*NKKDERKKNTK 171
S +F LAKN F N+K R + +
Sbjct: 439 SISESLIFPLAKNKPFENRKKNRLRTKR 356
>gb|BG367217.1|BG367217 HVSMEi0011F11f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0011F11f, mRNA sequence
Length = 873
Score = 198 bits (427), Expect = 4e-050
Identities = 82/112 (73%), Positives = 92/112 (82%)
Frame = -1 / +2
Query: 620 TADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGIYNVGTGRGRSVNEFVDACKKATGVNI 441
T DGTC+RDYIDVTDLVDAHVKALNKAE KVGIYNVGTGRGRSV EFV+ACKKATGVNI
Sbjct: 8 TPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGRGRSVKEFVEACKKATGVNI 187
Query: 440 KIEYLNRRPGDYAEVYSDPTKINKELNWTAHYTDLKESLSVAWRWQKSHPRG 285
K++Y RRPGDYAEV SDP ++N+EL+WT +TDL SL V +K H G
Sbjct: 188 KVDYFPRRPGDYAEVCSDPRRMNRELDWTGRFTDLFGSLVV*LHVRKKHQGG 343
Score = 140 bits (300), Expect = 1e-032
Identities = 75/112 (66%), Positives = 81/112 (72%)
Frame = +1 / -1
Query: 286 PRGCDFCHLHATDRLSLRSV**AVQLSSLFIFVGSLYTSA*SPGLLLRYSILMLTPVAFL 465
P C F + T RL RSV VQ SS FI GSL+TSA*SPG + S LMLTPVAFL
Sbjct: 342 PPWCFFLTCNYTTRLPKRSVNRPVQSSSRFILRGSLHTSA*SPGRRGK*STLMLTPVAFL 163
Query: 466 QASTNSLTERPLPVPTL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAV 621
QASTNS T+ PLPVPTL MPT SALLSAFT AST+SVTS+*SL QVPS V
Sbjct: 162 QASTNSFTDLPLPVPTLYMPTLPLSALLSAFTWASTRSVTSM*SLTQVPSGV 7
>gb|BQ759821.1|BQ759821 EBpi05_SQ004_B15 _R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_B15 5', mRNA sequence
Length = 315
Score = 188 bits (404), Expect = 6e-047
Identities = 74/81 (91%), Positives = 77/81 (95%)
Frame = -1 / +2
Query: 755 GSDPEGRLGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRDYIDVTD 576
G DPEGRLGEAPRPELREHGRISGACFDAA G+IPGLKV+GTDYPTADGTC+RDYIDVTD
Sbjct: 71 GRDPEGRLGEAPRPELREHGRISGACFDAASGIIPGLKVRGTDYPTADGTCVRDYIDVTD 250
Query: 575 LVDAHVKALNKAEPRKVGIYN 513
LVDAHVKAL KAEP KVGIYN
Sbjct: 251 LVDAHVKALGKAEPNKVGIYN 313
Score = 136 bits (292), Expect(2) = 2e-032
Identities = 63/82 (76%), Positives = 69/82 (84%)
Frame = +1 / -1
Query: 511 TL*MPTFLGSALLSAFT*ASTKSVTSI*SLMQVPSAVG*SVPLTFNPGMTPNAASKQAPD 690
TL*+PT LGSAL A T*AST+SVTS+*SL VPSAVG*SVP TF+PGM P+AASK AP+
Sbjct: 315 TL*IPTLLGSALPRALT*ASTRSVTSM*SLTHVPSAVG*SVPRTFSPGMIPDAASKHAPE 136
Query: 691 IRPCSRSSGLGASPNLPSGSDP 756
I PCSRSSGLGASP PSGS P
Sbjct: 135 ILPCSRSSGLGASPRRPSGSRP 70
Score = 23.1 bits (44), Expect(2) = 2e-032
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 745 GSDPITLKYL 774
G DPITLKY+
Sbjct: 80 GLDPITLKYI 51
>gb|BE195440.3|BE195440 HVSMEh0089K10f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0089K10f, mRNA sequence
Length = 988
Score = 118 bits (252), Expect(4) = 3e-043
Identities = 47/69 (68%), Positives = 55/69 (79%)
Frame = -1 / +1
Query: 1016 TLLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP*FPINPYGKAKKMAEDIIIDFS 837
TL +LEAMA+H V+TLIYSSTCATYGEPD MPI E TP PINPYG AKKM+EDII+DFS
Sbjct: 289 TLTVLEAMAAHNVKTLIYSSTCATYGEPDTMPIVETTPQIPINPYGMAKKMSEDIILDFS 468
Query: 836 NSKGVDMAV 810
+ + +
Sbjct: 469 KKSNMAVMI 495
Score = 80.3 bits (169), Expect(3) = 7e-022
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = +1 / -3
Query: 835 FEKSIMISSAIFLAFPYGLIGN*GVASVIGILSGSP*VAHVLE*IRVWTP*DAIAS 1002
FEKS M+SS IF A PYGLIG *GV S IGI+SGSP VA VLE*IRV+T AIAS
Sbjct: 470 FEKSRMMSSDIFFAMPYGLIGI*GVVSTIGIVSGSPYVAQVLE*IRVFTLCAAIAS 303
Score = 49.2 bits (101), Expect(4) = 3e-043
Identities = 27/57 (47%), Positives = 33/57 (57%)
Frame = -1 / +2
Query: 689 SGACFDAALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNKAEPRKVGI 519
S A FDAA G+IPG +V+ T Y GT R DLV+A+V KAE KVG+
Sbjct: 581 SRAWFDAASGIIPG*RVQETTYLLLMGTA*RTTXMSLDLVEAYV*TSGKAEAYKVGM 751
Score = 39.1 bits (79), Expect(4) = 3e-043
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -1 / +1
Query: 785 LQLHRYFNVIGSDPEGRLGEAPR 717
+ + RYFNVIGSDP GRLG R
Sbjct: 487 VMIFRYFNVIGSDPXGRLGGCSR 555
Score = 32.2 bits (64), Expect(3) = 7e-022
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1 / -3
Query: 730 PNLPSGSDPITLKYL 774
P P GSDPITLKYL
Sbjct: 542 PRRPXGSDPITLKYL 498
Score = 29.0 bits (57), Expect(3) = 7e-022
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3 / -1
Query: 648 SWNDS*CCIKASPR 689
+WNDS*CC+K R
Sbjct: 622 AWNDS*CCVKPRTR 581
Score = 25.4 bits (49), Expect(4) = 3e-043
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / +3
Query: 716 PELREHGRI 690
PELREHGRI
Sbjct: 555 PELREHGRI 581
>gb|AL505573.1|AL505573 AL505573 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08O06V 5', mRNA sequence
Length = 450
Score = 117 bits (251), Expect(2) = 4e-043
Identities = 47/70 (67%), Positives = 55/70 (78%)
Frame = -1 / +1
Query: 1016 TLLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP*FPINPYGKAKKMAEDIIIDFS 837
TL LEAMA+H V+TLIYSSTCATYGEPD MPI E TP PINPYGKAKKM+ED I+DFS
Sbjct: 145 TLTXLEAMAAHNVKTLIYSSTCATYGEPDTMPIVETTPHIPINPYGKAKKMSEDXILDFS 324
Query: 836 NSKGVDMAVM 807
+ + ++
Sbjct: 325 KKSNMAVMIL 354
Score = 78.0 bits (164), Expect(2) = 1e-026
Identities = 40/56 (71%), Positives = 43/56 (76%)
Frame = +1 / -2
Query: 835 FEKSIMISSAIFLAFPYGLIGN*GVASVIGILSGSP*VAHVLE*IRVWTP*DAIAS 1002
FEKS +SS IF A PYGLIG *GV S IGI+SGSP VA VLE*IRV+T AIAS
Sbjct: 326 FEKSRXMSSDIFFALPYGLIGM*GVVSTIGIVSGSPYVAQVLE*IRVFTLCAAIAS 159
Score = 77.6 bits (163), Expect(2) = 4e-043
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = -1 / +1
Query: 773 RYFNVIGSDPEGRLGEAPRPELREHGRISGAC 678
RYFNVIG PEGRLGEAPRPELREHGRISGAC
Sbjct: 355 RYFNVIGXXPEGRLGEAPRPELREHGRISGAC 450
Score = 62.0 bits (129), Expect(2) = 1e-026
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +1 / -2
Query: 682 APDIRPCSRSSGLGASPNLPSGSDPITLKYL 774
AP+I PCSRSSGLGASP PSG PITLKYL
Sbjct: 446 APEILPCSRSSGLGASPRRPSGXXPITLKYL 354
>gb|BF255654.2|BF255654 HVSMEf0007H02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0007H02f, mRNA sequence
Length = 841
Score = 141 bits (302), Expect(4) = 4e-042
Identities = 59/73 (80%), Positives = 65/73 (89%)
Frame = -1 / +1
Query: 1016 TLLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP*FPINPYGKAKKMAEDIIIDFS 837
TL++LEAMA H V+TLIYSSTCATYGEP+KMPITE T FPINPYGKAKKMAEDII+DFS
Sbjct: 445 TLVVLEAMAMHNVKTLIYSSTCATYGEPEKMPITEETSQFPINPYGKAKKMAEDIILDFS 624
Query: 836 NSKGVDMAVMILR 798
SK DM+VMILR
Sbjct: 625 KSKKSDMSVMILR 663
Score = 31.3 bits (62), Expect(4) = 4e-042
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / +1
Query: 773 RYFNVIGSDPEGR 735
RYFNVI SDPEG+
Sbjct: 661 RYFNVISSDPEGK 699
Score = 30.4 bits (60), Expect(4) = 4e-042
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1 / +2
Query: 737 RLGEAPRPELREHGRISG 684
RL E PELREHGR G
Sbjct: 698 RLSEGSPPELREHGRFLG 751
Score = 24.9 bits (48), Expect(4) = 4e-042
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1 / +1
Query: 686 GACFDAALGVIPGLKVKGTDYP 621
GA DA L +IPGLK + + P
Sbjct: 748 GAWLDA*LRIIPGLKGQSSRLP 813
>gb|BJ454539.1|BJ454539 BJ454539 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak24n03 5', mRNA sequence
Length = 629
Score = 130 bits (278), Expect(2) = 2e-034
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = -1 / +1
Query: 1016 TLLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP*FPINPYGKAKKMAEDIIIDFS 837
TLLILEAMASHGV+TLIYSSTCATYGEP+KMPI E TP PINPYGKAKKMAEDII+DFS
Sbjct: 379 TLLILEAMASHGVKTLIYSSTCATYGEPEKMPIIETTPQLPINPYGKAKKMAEDIILDFS 558
Query: 836 NSKGVDMAVM 807
+ + ++
Sbjct: 559 KRTDMSVMIL 588
Score = 100 bits (214), Expect(2) = 2e-025
Identities = 49/59 (83%), Positives = 52/59 (88%)
Frame = +1 / -1
Query: 835 FEKSIMISSAIFLAFPYGLIGN*GVASVIGILSGSP*VAHVLE*IRVWTP*DAIASKIS 1011
FEKS M+SSAIFLAFP GLIGN*GV S+IGI SGSP*VA VLE*I V TP*+AIASKIS
Sbjct: 560 FEKSSMMSSAIFLAFP*GLIGN*GVVSIIGIFSGSP*VAQVLE*ISVLTP*EAIASKIS 384
Score = 95.9 bits (203), Expect(2) = 7e-022
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = -3 / +3
Query: 1011 TDFGGYGISWSPNPYLLQYMCYLRRTR*DAYYRSHTLVPYQSIWKS*ENGRGYHNRFLKL 832
TDFGGYG SWS + YLLQY+C L TR DAY R HT V +WKS +NGRG+H RFLK
Sbjct: 384 TDFGGYGFSWSQDTYLLQYLCNLWGTREDAYNRDHTSVAN*PLWKSQKNGRGHHTRFLKE 563
Query: 831 EG 826
G
Sbjct: 564 NG 569
Score = 95.9 bits (203), Expect(2) = 7e-021
Identities = 39/60 (65%), Positives = 46/60 (76%)
Frame = +3 / -3
Query: 834 V*EIYYDILCHFLSFSIWIDRELRCGFCNRHLIWFSVGSTCTGVNKGLDSMRCHSLQNQ* 1013
+*EI YD+LCHF FSI ++ +LRCG RHL+WF + T TGVNK LDSMR HSLQNQ*
Sbjct: 561 L*EI*YDVLCHFFGFSIGVNWQLRCGLYYRHLLWFPISCTGTGVNKCLDSMRSHSLQNQ* 382
Score = 36.3 bits (73), Expect(2) = 2e-034
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -1 / +1
Query: 800 RLEPFLQLHRYFNVIGSDPEGR 735
R + + + RYFNVIGSDPEGR
Sbjct: 562 RTDMSVMILRYFNVIGSDPEGR 627
Score = 35.0 bits (70), Expect(2) = 2e-025
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1 / -1
Query: 733 NLPSGSDPITLKYL 774
NLPSGSDP+TLKYL
Sbjct: 629 NLPSGSDPMTLKYL 588
Score = 28.1 bits (55), Expect(2) = 7e-022
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3 / +3
Query: 771 IFQCYWI*P*GKI 733
IFQC+WI P GKI
Sbjct: 591 IFQCHWIRPRGKI 629
Score = 24.9 bits (48), Expect(2) = 7e-021
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2 / -2
Query: 734 IFPQGQIQ*H*NI 772
IFP G IQ*H*NI
Sbjct: 628 IFPLGLIQ*H*NI 590
>gb|BU974311.1|BU974311 HB27I16r BC Hordeum vulgare subsp. vulgare cDNA clone HB27I16
5-PRIME, mRNA sequence
Length = 450
Score = 130 bits (278), Expect(2) = 5e-033
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = -1 / +2
Query: 1016 TLLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP*FPINPYGKAKKMAEDIIIDFS 837
TLLILEAMASHGV+TLIYSSTCATYGEP+KMPI E TP PINPYGKAKKMAEDII+DFS
Sbjct: 206 TLLILEAMASHGVKTLIYSSTCATYGEPEKMPIIETTPQLPINPYGKAKKMAEDIILDFS 385
Query: 836 NSKGVDMAVM 807
+ + ++
Sbjct: 386 KRTDMSVMIL 415
Score = 100 bits (214), Expect(2) = 5e-024
Identities = 49/59 (83%), Positives = 52/59 (88%)
Frame = +1 / -1
Query: 835 FEKSIMISSAIFLAFPYGLIGN*GVASVIGILSGSP*VAHVLE*IRVWTP*DAIASKIS 1011
FEKS M+SSAIFLAFP GLIGN*GV S+IGI SGSP*VA VLE*I V TP*+AIASKIS
Sbjct: 387 FEKSSMMSSAIFLAFP*GLIGN*GVVSIIGIFSGSP*VAQVLE*ISVLTP*EAIASKIS 211
Score = 31.3 bits (62), Expect(2) = 5e-033
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1 / +2
Query: 800 RLEPFLQLHRYFNVIGSDPE 741
R + + + RYFNVIGSDPE
Sbjct: 389 RTDMSVMILRYFNVIGSDPE 448
Score = 30.4 bits (60), Expect(2) = 5e-024
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / -1
Query: 739 PSGSDPITLKYL 774
PSGSDP+TLKYL
Sbjct: 450 PSGSDPMTLKYL 415
>gb|BU971800.1|BU971800 HB19L11r BC Hordeum vulgare subsp. vulgare cDNA clone HB19L11
5-PRIME, mRNA sequence
Length = 569
Score = 63.4 bits (132), Expect(4) = 9e-032
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = -1 / +1
Query: 1007 ILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP*FPINPYGKAKKMAEDIIIDFSNS 831
+L+ MA+HG + L++SS+ YG P ++P TE P NPYG+ K + EDI D S
Sbjct: 13 LLQVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSATNPYGRTKLVIEDICRDLQRS 189
Score = 59.7 bits (124), Expect(4) = 9e-032
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = -1 / +1
Query: 668 ALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNK 543
A+G P L V GTDY T DGT +RDYI V DL D H+ AL K
Sbjct: 313 AVGRRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRK 438
Score = 38.6 bits (78), Expect(4) = 9e-032
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -1 / +1
Query: 521 IYNVGTGRGRSVNEFVDACKKATGVNIKIEY 429
+YN+GTG+G SV E V A +KA G I + Y
Sbjct: 472 VYNLGTGKGTSVLEMVAAFEKACGKKIPLVY 564
Score = 30.9 bits (61), Expect(4) = 9e-032
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / +1
Query: 779 LHRYFNVIGSDPEGRLGEAP 720
L RYFN +G+ P G +GE P
Sbjct: 211 LLRYFNPVGAHPSGYIGEDP 270
>gb|BJ463647.1|BJ463647 BJ463647 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32o13 5', mRNA sequence
Length = 533
Score = 130 bits (278), Expect = 1e-029
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = -1 / +1
Query: 1016 TLLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP*FPINPYGKAKKMAEDIIIDFS 837
TLLILEAMASHGV+TLIYSSTCATYGEP+KMPI E TP PINPYGKAKKMAEDII+DFS
Sbjct: 301 TLLILEAMASHGVKTLIYSSTCATYGEPEKMPIIETTPQLPINPYGKAKKMAEDIILDFS 480
Query: 836 NSKGVDMAVM 807
+ + ++
Sbjct: 481 KRTDMSVMIL 510
Score = 100 bits (214), Expect = 1e-020
Identities = 49/59 (83%), Positives = 52/59 (88%)
Frame = +1 / -1
Query: 835 FEKSIMISSAIFLAFPYGLIGN*GVASVIGILSGSP*VAHVLE*IRVWTP*DAIASKIS 1011
FEKS M+SSAIFLAFP GLIGN*GV S+IGI SGSP*VA VLE*I V TP*+AIASKIS
Sbjct: 482 FEKSSMMSSAIFLAFP*GLIGN*GVVSIIGIFSGSP*VAQVLE*ISVLTP*EAIASKIS 306
>gb|BE420919.1|BE420919 HWM003.H08 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM003.H08, mRNA sequence
Length = 1212
Score = 65.7 bits (137), Expect(4) = 8e-029
Identities = 28/59 (47%), Positives = 35/59 (59%)
Frame = -1 / +2
Query: 521 IYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHY 345
+YN+GTG+G SV E V A +KA G I + Y RR GD VY+ K KEL W A +
Sbjct: 416 VYNLGTGKGTSVLEMVAAFEKACGKKIPLVYAGRRAGDAETVYAATAKAEKELKWKAKF 592
Score = 56.5 bits (117), Expect(4) = 8e-029
Identities = 24/42 (57%), Positives = 27/42 (64%)
Frame = -1 / +2
Query: 668 ALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNK 543
A+G P L V GT Y T DGT +RDYI V DL D H+ AL K
Sbjct: 257 AVGRRPALTVYGTHYNTKDGTGVRDYIHVVDLADGHIAALRK 382
Score = 30.9 bits (61), Expect(4) = 8e-029
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / +1
Query: 779 LHRYFNVIGSDPEGRLGEAP 720
L RYFN +G+ P G +GE P
Sbjct: 154 LLRYFNPVGAHPSGYIGEDP 213
Score = 29.5 bits (58), Expect(4) = 8e-029
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1 / +1
Query: 917 TEATP*FPINPYGKAKKMAEDIIIDFSNS 831
TE P NPYG+ K + EDI D S
Sbjct: 46 TEELPLSGTNPYGRTKLVIEDICRDLQRS 132
>gb|BU975384.1|BU975384 HB31F04r BC Hordeum vulgare subsp. vulgare cDNA clone HB31F04
5-PRIME, mRNA sequence
Length = 501
Score = 66.1 bits (138), Expect(3) = 3e-026
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = -1 / +1
Query: 1016 TLLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP*FPINPYGKAKKMAEDIIIDFS 837
T+ +L+ MA+HG + L++SS+ YG P ++P TE P NPYG+ K + EDI D
Sbjct: 67 TITLLQVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSATNPYGRTKLVIEDICRDLQ 246
Query: 836 NS 831
S
Sbjct: 247 RS 252
Score = 59.7 bits (124), Expect(3) = 3e-026
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = -1 / +1
Query: 668 ALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNK 543
A+G P L V GTDY T DGT +RDYI V DL D H+ AL K
Sbjct: 376 AVGRRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRK 501
Score = 30.9 bits (61), Expect(3) = 3e-026
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / +1
Query: 779 LHRYFNVIGSDPEGRLGEAP 720
L RYFN +G+ P G +GE P
Sbjct: 274 LLRYFNPVGAHPSGYIGEDP 333
>gb|BE558753.3|BE558753 HV_CEb0020E08f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020E08f, mRNA sequence
Length = 790
Score = 63.8 bits (133), Expect(4) = 5e-026
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = -1 / +1
Query: 518 YNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHY 345
YN+GTG+G SV E V+A +KA+G I + RRPGD +++ K +ELNW A Y
Sbjct: 304 YNLGTGKGTSVLEIVNAFEKASGKKIPLVVGQRRPGDAEILFAGTGKAERELNWKAKY 477
Score = 51.0 bits (105), Expect(4) = 5e-026
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = -1 / +1
Query: 668 ALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNK 543
A+G P + + G +Y T DGT +RDYI V DL + H+ AL K
Sbjct: 142 AVGRRPSVTIFGNNYATKDGTGVRDYIHVLDLAEGHIAALRK 267
Score = 34.1 bits (68), Expect(4) = 5e-026
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -1 / +1
Query: 779 LHRYFNVIGSDPEGRLGEAPR 717
L RYFN +G+ P G LGE PR
Sbjct: 40 LLRYFNPVGAHPSGYLGEDPR 102
Score = 24.0 bits (46), Expect(4) = 5e-026
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -1 / +1
Query: 314 WRWQKSHPRGYG 279
W W +P GYG
Sbjct: 505 WNWASKNPYGYG 540
>gb|CA013313.1|CA013313 HT08A11r HT Hordeum vulgare subsp. vulgare cDNA clone HT08A11
5-PRIME, mRNA sequence
Length = 646
Score = 65.7 bits (137), Expect(4) = 1e-025
Identities = 28/59 (47%), Positives = 35/59 (59%)
Frame = -1 / +3
Query: 521 IYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHY 345
+YN+GTG+G SV E V A +KA G I + Y RR GD VY+ K KEL W A +
Sbjct: 303 VYNLGTGKGTSVLEMVAAFEKACGKKIPLVYAGRRAGDAETVYAATAKAEKELKWKAKF 479
Score = 59.7 bits (124), Expect(4) = 1e-025
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = -1 / +3
Query: 668 ALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNK 543
A+G P L V GTDY T DGT +RDYI V DL D H+ AL K
Sbjct: 144 AVGRRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRK 269
Score = 24.0 bits (46), Expect(4) = 1e-025
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -1 / +3
Query: 314 WRWQKSHPRGYG 279
W W +P GYG
Sbjct: 507 WNWASKNPYGYG 542
Score = 22.1 bits (42), Expect(4) = 1e-025
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1 / +3
Query: 764 NVIGSDPEGRLGEAP 720
N +G+ P G +GE P
Sbjct: 57 NPVGAHPSGYIGEDP 101
>gb|CA013080.1|CA013080 HT07F09r HT Hordeum vulgare subsp. vulgare cDNA clone HT07F09
5-PRIME, mRNA sequence
Length = 637
Score = 68.0 bits (142), Expect(3) = 2e-025
Identities = 28/58 (48%), Positives = 36/58 (62%)
Frame = -1 / +1
Query: 518 YNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHY 345
YN+GTGRG +V E V A +KA G I ++ RRPGD +VY+ K +EL W A Y
Sbjct: 313 YNLGTGRGTTVLEMVSAFEKAYGKKIPVKMCPRRPGDSEQVYASTAKAEQELGWRAKY 486
Score = 57.4 bits (119), Expect(3) = 2e-025
Identities = 24/42 (57%), Positives = 27/42 (64%)
Frame = -1 / +1
Query: 668 ALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNK 543
A+G P L V G DY T DGT +RDYI V DL D H+ AL K
Sbjct: 154 AVGRRPELNVYGHDYRTRDGTAVRDYIHVVDLADGHIAALEK 279
Score = 28.6 bits (56), Expect(3) = 2e-025
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1 / +1
Query: 779 LHRYFNVIGSDPEGRLGEAPR 717
L RYFN IG+ G +GE P+
Sbjct: 52 LLRYFNPIGAHQSGDIGEDPK 114
>gb|BU995681.1|BU995681 HM11A08r HM Hordeum vulgare subsp. vulgare cDNA clone HM11A08
5-PRIME, mRNA sequence
Length = 642
Score = 65.7 bits (137), Expect(3) = 6e-025
Identities = 28/59 (47%), Positives = 35/59 (59%)
Frame = -1 / +3
Query: 521 IYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHY 345
+YN+GTG+G SV E V A +KA G I + Y RR GD VY+ K KEL W A +
Sbjct: 210 VYNLGTGKGTSVLEMVAAFEKACGKKIPLVYAGRRAGDAETVYAATAKAEKELKWKAKF 386
Score = 62.5 bits (130), Expect(3) = 6e-025
Identities = 28/57 (49%), Positives = 32/57 (56%)
Frame = -1 / +3
Query: 713 ELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNK 543
E E + C A+G P L V GTDY T DGT +RDYI V DL D H+ AL K
Sbjct: 6 EALESPQPDALCPQVAVGRRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRK 176
Score = 24.0 bits (46), Expect(3) = 6e-025
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -1 / +3
Query: 314 WRWQKSHPRGYG 279
W W +P GYG
Sbjct: 414 WNWASKNPYGYG 449
>gb|BU990717.1|BU990717 HF25N16r HF Hordeum vulgare subsp. vulgare cDNA clone HF25N16
5-PRIME, mRNA sequence
Length = 633
Score = 65.7 bits (137), Expect(3) = 4e-024
Identities = 28/59 (47%), Positives = 35/59 (59%)
Frame = -1 / +3
Query: 521 IYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHY 345
+YN+GTG+G SV E V A +KA G I + Y RR GD VY+ K KEL W A +
Sbjct: 216 VYNLGTGKGTSVLEMVAAFEKACGKKIPLVYAGRRAGDAETVYAATAKAEKELKWKAKF 392
Score = 59.7 bits (124), Expect(3) = 4e-024
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = -1 / +3
Query: 668 ALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNK 543
A+G P L V GTDY T DGT +RDYI V DL D H+ AL K
Sbjct: 57 AVGRRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRK 182
Score = 24.0 bits (46), Expect(3) = 4e-024
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -1 / +3
Query: 314 WRWQKSHPRGYG 279
W W +P GYG
Sbjct: 420 WNWASKNPYGYG 455
>gb|BJ463662.1|BJ463662 BJ463662 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32p11 5', mRNA sequence
Length = 540
Score = 63.8 bits (133), Expect(3) = 5e-024
Identities = 27/58 (46%), Positives = 37/58 (63%)
Frame = -1 / +1
Query: 518 YNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHY 345
YN+GTG+G SV E V+A +KA+G I + RRPGD +++ K +ELNW A Y
Sbjct: 328 YNLGTGKGTSVLEIVNAFEKASGKKIPLVVGQRRPGDAEILFAGTGKAERELNWKAKY 501
Score = 51.0 bits (105), Expect(3) = 5e-024
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = -1 / +1
Query: 668 ALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNK 543
A+G P + + G +Y T DGT +RDYI V DL + H+ AL K
Sbjct: 166 AVGRRPSVTIFGNNYATKDGTGVRDYIHVLDLAEGHIAALRK 291
Score = 34.1 bits (68), Expect(3) = 5e-024
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -1 / +1
Query: 779 LHRYFNVIGSDPEGRLGEAPR 717
L RYFN +G+ P G LGE PR
Sbjct: 64 LLRYFNPVGAHPSGYLGEDPR 126
>gb|CA013755.1|CA013755 HT09G07r HT Hordeum vulgare subsp. vulgare cDNA clone HT09G07
5-PRIME, mRNA sequence
Length = 530
Score = 62.5 bits (130), Expect(3) = 7e-024
Identities = 22/76 (28%), Positives = 43/76 (56%)
Frame = -1 / +2
Query: 1016 TLLILEAMASHGVQTLIYSSTCATYGEPDKMPITEATP*FPINPYGKAKKMAEDIIIDFS 837
T+ + + M HG L++SS+ YG+P+K+P E +P +NPYG+ K E+++ D+
Sbjct: 95 TVNLYDVMKKHGCNKLVFSSSATVYGQPEKVPCVEDSPLKALNPYGRTKLYLEEMLRDYQ 274
Query: 836 NSKGVDMAVMILRLEP 789
++ +++ P
Sbjct: 275 HANPEWRTILLRYFNP 322
Score = 57.4 bits (119), Expect(3) = 7e-024
Identities = 24/42 (57%), Positives = 27/42 (64%)
Frame = -1 / +2
Query: 668 ALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNK 543
A+G P L V G DY T DGT +RDYI V DL D H+ AL K
Sbjct: 404 AVGRRPELNVYGHDYRTRDGTAVRDYIHVVDLADGHIAALEK 529
Score = 28.6 bits (56), Expect(3) = 7e-024
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1 / +2
Query: 779 LHRYFNVIGSDPEGRLGEAPR 717
L RYFN IG+ G +GE P+
Sbjct: 302 LLRYFNPIGAHQSGDIGEDPK 364
>gb|AV912136.1|AV912136 AV912136 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak2o06 3', mRNA sequence
Length = 149
Score = 109 bits (233), Expect = 2e-023
Identities = 43/49 (87%), Positives = 45/49 (91%)
Frame = -1 / -1
Query: 734 LGEAPRPELREHGRISGACFDAALGVIPGLKVKGTDYPTADGTCIRDYI 588
LGEAP ELREHGRISGACFDAALG+IPGLKVKGTDY T DGTC+RDYI
Sbjct: 149 LGEAPPXELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTCVRDYI 3
>gb|AV936911.1|AV936911 AV936911 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal8e17 3', mRNA sequence
Length = 719
Score = 65.7 bits (137), Expect(3) = 2e-022
Identities = 28/59 (47%), Positives = 35/59 (59%)
Frame = -1 / -2
Query: 521 IYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYSDPTKINKELNWTAHY 345
+YN+GTG+G SV E V A +KA G I + Y RR GD VY+ K KEL W A +
Sbjct: 577 VYNLGTGKGTSVLEMVAAFEKACGKKIPLVYAGRRAGDAETVYAATAKAEKELKWKAKF 401
Score = 53.8 bits (111), Expect(3) = 2e-022
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = -1 / -2
Query: 647 LKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNK 543
L V GTDY T DGT +RDYI V DL D H+ AL K
Sbjct: 715 LTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALXK 611
Score = 24.0 bits (46), Expect(3) = 2e-022
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -1 / -2
Query: 314 WRWQKSHPRGYG 279
W W +P GYG
Sbjct: 373 WNWASKNPYGYG 338
>gb|BM371846.2|BM371846 EBma08_SQ004_C16_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_C16 5', mRNA sequence
Length = 398
Score = 59.7 bits (124), Expect(3) = 7e-022
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = -1 / +1
Query: 668 ALGVIPGLKVKGTDYPTADGTCIRDYIDVTDLVDAHVKALNK 543
A+G P L V GTDY T DGT +RDYI V DL D H+ AL K
Sbjct: 100 AVGRRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRK 225
Score = 51.5 bits (106), Expect(3) = 7e-022
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = -1 / +1
Query: 521 IYNVGTGRGRSVNEFVDACKKATGVNIKIEYLNRRPGDYAEVYS 390
+YN+GTG+G SV E V A +KA G I + Y RR GD VY+
Sbjct: 259 VYNLGTGKGTSVLEMVAAFEKACGKKIPLVYAGRRAGDAETVYA 390
Score = 30.4 bits (60), Expect(3) = 7e-022
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1 / +1
Query: 773 RYFNVIGSDPEGRLGEAP 720
RYFN +G+ P G +GE P
Sbjct: 4 RYFNPVGAHPSGYIGEDP 57
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 402,745,926
Number of Sequences: 312970
Number of extensions: 5507043
Number of successful extensions: 26129
Number of sequences better than 1.0e-020: 53
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 12041669354
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)