TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3099514.2.1
(547 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL506754.1|AL506754 AL506754 Hordeum vulgare Barke devel... 148 2e-035
gb|AL506985.1|AL506985 AL506985 Hordeum vulgare Barke devel... 148 2e-035
gb|AL507134.1|AL507134 AL507134 Hordeum vulgare Barke devel... 148 2e-035
gb|AL508179.1|AL508179 AL508179 Hordeum vulgare Barke devel... 148 2e-035
gb|AL508823.1|AL508823 AL508823 Hordeum vulgare Barke devel... 148 2e-035
gb|AL509925.1|AL509925 AL509925 Hordeum vulgare Barke devel... 148 2e-035
gb|AL511708.1|AL511708 AL511708 Hordeum vulgare Barke devel... 148 2e-035
gb|BG369570.2|BG369570 HVSMEi0024P20f Hordeum vulgare 20 DA... 148 2e-035
gb|BG414977.2|BG414977 HVSMEk0004I09f Hordeum vulgare testa... 148 2e-035
gb|AV927691.1|AV927691 AV927691 K. Sato unpublished cDNA li... 148 2e-035
gb|AV930471.1|AV930471 AV930471 K. Sato unpublished cDNA li... 148 2e-035
gb|AV930484.1|AV930484 AV930484 K. Sato unpublished cDNA li... 148 2e-035
gb|AV931344.1|AV931344 AV931344 K. Sato unpublished cDNA li... 148 2e-035
gb|AV931842.1|AV931842 AV931842 K. Sato unpublished cDNA li... 148 2e-035
gb|AV932215.1|AV932215 AV932215 K. Sato unpublished cDNA li... 148 2e-035
gb|AV932216.1|AV932216 AV932216 K. Sato unpublished cDNA li... 148 2e-035
gb|AV933009.1|AV933009 AV933009 K. Sato unpublished cDNA li... 148 2e-035
gb|AV933021.1|AV933021 AV933021 K. Sato unpublished cDNA li... 148 2e-035
gb|AV933141.1|AV933141 AV933141 K. Sato unpublished cDNA li... 148 2e-035
gb|AV935055.1|AV935055 AV935055 K. Sato unpublished cDNA li... 148 2e-035
gb|AV935056.1|AV935056 AV935056 K. Sato unpublished cDNA li... 148 2e-035
gb|AV935774.1|AV935774 AV935774 K. Sato unpublished cDNA li... 148 2e-035
gb|AV936274.1|AV936274 AV936274 K. Sato unpublished cDNA li... 148 2e-035
gb|AV936695.1|AV936695 AV936695 K. Sato unpublished cDNA li... 148 2e-035
gb|AJ463139.1|AJ463139 AJ463139 S00002 Hordeum vulgare subs... 148 2e-035
gb|BJ469105.1|BJ469105 BJ469105 K. Sato unpublished cDNA li... 148 2e-035
gb|BJ471943.1|BJ471943 BJ471943 K. Sato unpublished cDNA li... 148 2e-035
gb|BJ472040.1|BJ472040 BJ472040 K. Sato unpublished cDNA li... 148 2e-035
gb|BJ474322.1|BJ474322 BJ474322 K. Sato unpublished cDNA li... 148 2e-035
gb|BJ476068.1|BJ476068 BJ476068 K. Sato unpublished cDNA li... 148 2e-035
gb|BQ656255.1|BQ656255 HA05C18u HA Hordeum vulgare subsp. v... 148 2e-035
gb|BQ663665.1|BQ663665 HU03I09u HU Hordeum vulgare subsp. v... 148 2e-035
gb|BQ739984.1|BQ739984 HC01H04 HC Hordeum vulgare subsp. vu... 148 2e-035
gb|BM372166.2|BM372166 EBro03_SQ004_D08_R root, 3 week, wat... 148 2e-035
gb|BQ763039.1|BQ763039 EBro02_SQ006_P24_R root, 3 week, hyd... 148 2e-035
gb|BQ765987.1|BQ765987 EBro03_SQ008_P18_R root, 3 week, wat... 148 2e-035
gb|BQ766074.1|BQ766074 EBro03_SQ008_P22_R root, 3 week, wat... 148 2e-035
gb|BU967663.1|BU967663 HB05A08r BC Hordeum vulgare subsp. v... 148 2e-035
gb|BU967723.1|BU967723 HB05D07r BC Hordeum vulgare subsp. v... 148 2e-035
gb|BU968978.1|BU968978 HB10C15r BC Hordeum vulgare subsp. v... 148 2e-035
gb|BU975831.1|BU975831 HB32G24r BC Hordeum vulgare subsp. v... 148 2e-035
gb|BU983536.1|BU983536 HA30B06r HA Hordeum vulgare subsp. v... 148 2e-035
gb|BU986345.1|BU986345 HF11H21r HF Hordeum vulgare subsp. v... 148 2e-035
gb|BU988196.1|BU988196 HF16O23r HF Hordeum vulgare subsp. v... 148 2e-035
gb|CA000573.1|CA000573 HS08B05u HS Hordeum vulgare subsp. v... 148 2e-035
gb|CA011241.1|CA011241 HT06L10u HT Hordeum vulgare subsp. v... 148 2e-035
gb|CA014591.1|CA014591 HT11M11r HT Hordeum vulgare subsp. v... 148 2e-035
gb|CK125339.1|CK125339 BES1824107l18 BES1824 Hordeum vulgar... 148 2e-035
gb|CK125495.1|CK125495 BES1824108m09 BES1824 Hordeum vulgar... 148 2e-035
emb|X65871.1|HVSSYNMR H.vulgare mRNA for sucrose synthase 148 2e-035
gb|BG416406.1|BG416406 HVSMEk0012B04f Hordeum vulgare testa... 148 3e-035
gb|CB878688.1|CB878688 HP09H14T HP Hordeum vulgare subsp. v... 148 3e-035
gb|AW983288.2|AW983288 HVSMEg0010B12f Hordeum vulgare pre-a... 147 5e-035
gb|BI956220.1|BI956220 HVSMEn0001D19f Hordeum vulgare rachi... 147 5e-035
gb|BI958671.1|BI958671 HVSMEn0016C08f Hordeum vulgare rachi... 147 5e-035
gb|BQ763033.1|BQ763033 EBro02_SQ006_O24_R root, 3 week, hyd... 147 5e-035
gb|AL506574.1|AL506574 AL506574 Hordeum vulgare Barke devel... 146 7e-035
gb|AL506937.1|AL506937 AL506937 Hordeum vulgare Barke devel... 146 7e-035
gb|AL507545.1|AL507545 AL507545 Hordeum vulgare Barke devel... 146 7e-035
gb|AL508508.1|AL508508 AL508508 Hordeum vulgare Barke devel... 146 7e-035
gb|AL509749.1|AL509749 AL509749 Hordeum vulgare Barke devel... 146 7e-035
gb|AL510205.1|AL510205 AL510205 Hordeum vulgare Barke devel... 146 7e-035
gb|AL510640.1|AL510640 AL510640 Hordeum vulgare Barke devel... 146 7e-035
gb|AL511569.1|AL511569 AL511569 Hordeum vulgare Barke devel... 146 7e-035
gb|BG418363.2|BG418363 HVSMEk0022H07f Hordeum vulgare testa... 146 7e-035
gb|BM368131.2|BM368131 EBed01_SQ002_E06_R endosperm, 6 DPA,... 146 7e-035
gb|BM440955.2|BM440955 EBed02_SQ002_A03_R endosperm, 8 DPA,... 146 7e-035
gb|BM441305.2|BM441305 EBed02_SQ002_P21_R endosperm, 8 DPA,... 146 7e-035
gb|BI780819.2|BI780819 EBma05_SQ001_A08_R maternal, 12 DPA,... 146 7e-035
gb|BQ754993.1|BQ754993 EBed02_SQ003_G14_R endosperm, 8 DPA,... 146 7e-035
gb|BU977903.1|BU977903 HA12D23u HA Hordeum vulgare subsp. v... 146 7e-035
gb|BU982148.1|BU982148 HA25K14r HA Hordeum vulgare subsp. v... 146 7e-035
gb|BU983395.1|BU983395 HA29J11r HA Hordeum vulgare subsp. v... 146 7e-035
gb|BU994091.1|BU994091 HM05L09r HM Hordeum vulgare subsp. v... 146 7e-035
gb|BU994650.1|BU994650 HM07L22r HM Hordeum vulgare subsp. v... 146 7e-035
gb|CB875605.1|CB875605 HX08M24w HX Hordeum vulgare subsp. v... 146 7e-035
gb|CB880751.1|CB880751 HM07L09w HM Hordeum vulgare subsp. v... 146 7e-035
gb|CK123919.1|CK123919 BES1824106c09 BES1824 Hordeum vulgar... 146 7e-035
gb|CK124243.1|CK124243 BES1824108b10 BES1824 Hordeum vulgar... 146 7e-035
emb|X69931.1|HVRNASS H.vulgare mRNA for sucrose synthase 146 7e-035
gb|AV930491.1|AV930491 AV930491 K. Sato unpublished cDNA li... 145 1e-034
gb|BQ663528.1|BQ663528 HU03A05u HU Hordeum vulgare subsp. v... 145 1e-034
gb|BQ663621.1|BQ663621 HU03G06u HU Hordeum vulgare subsp. v... 145 1e-034
gb|BQ663764.1|BQ663764 HU03P12u HU Hordeum vulgare subsp. v... 145 1e-034
gb|BI778810.2|BI778810 EBro01_SQ001_J10_R root, 3 week, hyd... 145 1e-034
gb|BQ765282.1|BQ765282 EBro03_SQ006_A19_R root, 3 week, wat... 145 1e-034
gb|CA005735.1|CA005735 HU08N06u HU Hordeum vulgare subsp. v... 145 1e-034
gb|BG418826.1|BG418826 HVSMEk0024K01f Hordeum vulgare testa... 144 3e-034
gb|BU981301.1|BU981301 HA23D11r HA Hordeum vulgare subsp. v... 144 4e-034
gb|CV059399.1|CV059399 BNEL47f9 Barley EST endosperm librar... 144 4e-034
gb|CB880044.1|CB880044 HM05F03w HM Hordeum vulgare subsp. v... 144 5e-034
gb|AL507183.1|AL507183 AL507183 Hordeum vulgare Barke devel... 142 1e-033
gb|AW982186.2|AW982186 HVSMEg0002C15f Hordeum vulgare pre-a... 141 2e-033
gb|BG418579.1|BG418579 HVSMEk0023E16f Hordeum vulgare testa... 140 5e-033
gb|AL508575.1|AL508575 AL508575 Hordeum vulgare Barke devel... 140 6e-033
gb|BI958579.1|BI958579 HVSMEn0015L19f Hordeum vulgare rachi... 139 9e-033
gb|AL512089.1|AL512089 AL512089 Hordeum vulgare Barke devel... 135 1e-031
gb|BE602450.2|BE602450 HVSMEh0098P06f Hordeum vulgare 5-45 ... 133 5e-031
gb|AL509551.1|AL509551 AL509551 Hordeum vulgare Barke devel... 133 7e-031
gb|CA010000.1|CA010000 HT12E14u HT Hordeum vulgare subsp. v... 133 1e-030
gb|BU968075.1|BU968075 HB06F12r BC Hordeum vulgare subsp. v... 123 2e-030
gb|AL510755.1|AL510755 AL510755 Hordeum vulgare Barke devel... 131 4e-030
gb|CB877551.1|CB877551 HP05F11T HP Hordeum vulgare subsp. v... 127 4e-030
gb|AL511119.1|AL511119 AL511119 Hordeum vulgare Barke devel... 83 8e-030
gb|AL511948.1|AL511948 AL511948 Hordeum vulgare Barke devel... 83 1e-029
gb|BG415984.2|BG415984 HVSMEk0009F01f Hordeum vulgare testa... 115 2e-029
gb|BI956349.1|BI956349 HVSMEn0002L14f Hordeum vulgare rachi... 128 2e-029
gb|AL507886.1|AL507886 AL507886 Hordeum vulgare Barke devel... 108 4e-029
gb|AL511771.1|AL511771 AL511771 Hordeum vulgare Barke devel... 83 4e-029
gb|AL502619.1|AL502619 AL502619 Hordeum vulgare Barke roots... 127 6e-029
gb|BQ657656.1|BQ657656 HA07I08u HA Hordeum vulgare subsp. v... 127 6e-029
gb|BQ657862.1|BQ657862 HA06K19u HA Hordeum vulgare subsp. v... 127 6e-029
gb|AL509343.1|AL509343 AL509343 Hordeum vulgare Barke devel... 93 8e-029
gb|CB882795.1|CB882795 HL02N21w HL Hordeum vulgare subsp. v... 125 2e-028
gb|BM441123.2|BM441123 EBed02_SQ002_H22_R endosperm, 8 DPA,... 124 3e-028
gb|BU977902.1|BU977902 HA12D23r HA Hordeum vulgare subsp. v... 123 8e-028
emb|Y15802.1|HVSUCSYN2 Hordeum vulgare Ss2 gene 79 5e-027
gb|AV934022.1|AV934022 AV934022 K. Sato unpublished cDNA li... 105 1e-025
gb|AL511205.1|AL511205 AL511205 Hordeum vulgare Barke devel... 97 3e-025
gb|AL510362.1|AL510362 AL510362 Hordeum vulgare Barke devel... 89 7e-025
gb|AL511249.1|AL511249 AL511249 Hordeum vulgare Barke devel... 83 9e-025
gb|AL512052.1|AL512052 AL512052 Hordeum vulgare Barke devel... 83 9e-025
gb|AL507987.1|AL507987 AL507987 Hordeum vulgare Barke devel... 95 2e-024
gb|BU970742.1|BU970742 HB15I19r BC Hordeum vulgare subsp. v... 106 7e-023
gb|BU970650.1|BU970650 HB15E14r BC Hordeum vulgare subsp. v... 105 3e-022
gb|BQ765365.1|BQ765365 EBro03_SQ006_P20_R root, 3 week, wat... 103 9e-022
gb|CA005161.1|CA005161 HU11L08u HU Hordeum vulgare subsp. v... 103 9e-022
>gb|AL506754.1|AL506754 AL506754 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04C11T 5',
mRNA sequence
Length = 700
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -3
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 506 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 327
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 326 KYRSLAAAVPLAVD 285
>gb|AL506985.1|AL506985 AL506985 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04N05T 5',
mRNA sequence
Length = 700
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -3
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 506 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 327
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 326 KYRSLAAAVPLAVD 285
>gb|AL507134.1|AL507134 AL507134 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05K11T 5',
mRNA sequence
Length = 700
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 525 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 346
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 345 KYRSLAAAVPLAVD 304
>gb|AL508179.1|AL508179 AL508179 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08A05V 5',
mRNA sequence
Length = 700
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -3
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 515 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 336
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 335 KYRSLAAAVPLAVD 294
>gb|AL508823.1|AL508823 AL508823 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09O14V 5',
mRNA sequence
Length = 699
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 516 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 337
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 336 KYRSLAAAVPLAVD 295
>gb|AL509925.1|AL509925 AL509925 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03F02u 3',
mRNA sequence
Length = 593
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 527 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 348
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 347 KYRSLAAAVPLAVD 306
>gb|AL511708.1|AL511708 AL511708 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08P09u 3',
mRNA sequence
Length = 584
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 511 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 332
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 331 KYRSLAAAVPLAVD 290
>gb|BG369570.2|BG369570 HVSMEi0024P20f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024P20f, mRNA sequence
Length = 741
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 235 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 414
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 415 KYRSLAAAVPLAVD 456
>gb|BG414977.2|BG414977 HVSMEk0004I09f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0004I09f, mRNA sequence
Length = 542
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 19 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 198
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 199 KYRSLAAAVPLAVD 240
>gb|AV927691.1|AV927691 AV927691 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd3d07 3', mRNA sequence
Length = 659
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -3
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 432 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 253
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 252 KYRSLAAAVPLAVD 211
>gb|AV930471.1|AV930471 AV930471 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22k18 3', mRNA sequence
Length = 549
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -3
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 475 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 296
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 295 KYRSLAAAVPLAVD 254
>gb|AV930484.1|AV930484 AV930484 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22m01 3', mRNA sequence
Length = 667
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 448 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 269
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 268 KYRSLAAAVPLAVD 227
>gb|AV931344.1|AV931344 AV931344 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19h10 3', mRNA sequence
Length = 737
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 475 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 296
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 295 KYRSLAAAVPLAVD 254
>gb|AV931842.1|AV931842 AV931842 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26g14 3', mRNA sequence
Length = 663
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 449 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 270
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 269 KYRSLAAAVPLAVD 228
>gb|AV932215.1|AV932215 AV932215 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2l17 5', mRNA sequence
Length = 466
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 50 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 229
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 230 KYRSLAAAVPLAVD 271
>gb|AV932216.1|AV932216 AV932216 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2l18 5', mRNA sequence
Length = 455
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 35 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 214
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 215 KYRSLAAAVPLAVD 256
>gb|AV933009.1|AV933009 AV933009 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5a13 5', mRNA sequence
Length = 589
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +3
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 54 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 233
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 234 KYRSLAAAVPLAVD 275
>gb|AV933021.1|AV933021 AV933021 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5b01 5', mRNA sequence
Length = 572
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +3
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 36 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 215
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 216 KYRSLAAAVPLAVD 257
>gb|AV933141.1|AV933141 AV933141 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5i06 5', mRNA sequence
Length = 651
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 35 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 214
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 215 KYRSLAAAVPLAVD 256
>gb|AV935055.1|AV935055 AV935055 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2l17 3', mRNA sequence
Length = 598
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 547 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 368
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 367 KYRSLAAAVPLAVD 326
>gb|AV935056.1|AV935056 AV935056 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2l18 3', mRNA sequence
Length = 591
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 540 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 361
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 360 KYRSLAAAVPLAVD 319
>gb|AV935774.1|AV935774 AV935774 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6f23 3', mRNA sequence
Length = 609
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 476 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 297
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 296 KYRSLAAAVPLAVD 255
>gb|AV936274.1|AV936274 AV936274 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal10l22 3', mRNA sequence
Length = 618
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -3
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 601 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 422
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 421 KYRSLAAAVPLAVD 380
>gb|AV936695.1|AV936695 AV936695 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5i06 3', mRNA sequence
Length = 605
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 554 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 375
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 374 KYRSLAAAVPLAVD 333
>gb|AJ463139.1|AJ463139 AJ463139 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200071A06F1, mRNA sequence
Length = 360
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 49 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 228
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 229 KYRSLAAAVPLAVD 270
>gb|BJ469105.1|BJ469105 BJ469105 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13c19 5', mRNA sequence
Length = 490
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 176 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 355
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 356 KYRSLAAAVPLAVD 397
>gb|BJ471943.1|BJ471943 BJ471943 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal28k13 5', mRNA sequence
Length = 571
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 176 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 355
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 356 KYRSLAAAVPLAVD 397
>gb|BJ472040.1|BJ472040 BJ472040 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal31k17 5', mRNA sequence
Length = 443
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 160 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 339
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 340 KYRSLAAAVPLAVD 381
>gb|BJ474322.1|BJ474322 BJ474322 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13c19 3', mRNA sequence
Length = 639
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -3
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 478 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 299
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 298 KYRSLAAAVPLAVD 257
>gb|BJ476068.1|BJ476068 BJ476068 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal31k17 3', mRNA sequence
Length = 650
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 475 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 296
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 295 KYRSLAAAVPLAVD 254
>gb|BQ656255.1|BQ656255 HA05C18u HA Hordeum vulgare subsp. vulgare cDNA clone HA05C18
3-PRIME, mRNA sequence
Length = 501
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 500 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 321
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 320 KYRSLAAAVPLAVD 279
>gb|BQ663665.1|BQ663665 HU03I09u HU Hordeum vulgare subsp. vulgare cDNA clone HU03I09
3-PRIME, mRNA sequence
Length = 510
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 491 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 312
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 311 KYRSLAAAVPLAVD 270
>gb|BQ739984.1|BQ739984 HC01H04 HC Hordeum vulgare subsp. vulgare cDNA clone HC01H04
similar to sucrose synthase (EC 2.4.1.13) - barley
(fragment) gi|19108|emb|CAA47264.1| (X66728) sucrose
synthase [Hordeum vulgare], mRNA sequence
Length = 612
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 161 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 340
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 341 KYRSLAAAVPLAVD 382
>gb|BM372166.2|BM372166 EBro03_SQ004_D08_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_D08 5', mRNA sequence
Length = 459
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 92 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 271
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 272 KYRSLAAAVPLAVD 313
>gb|BQ763039.1|BQ763039 EBro02_SQ006_P24_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ006_P24 5', mRNA sequence
Length = 664
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 313 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 492
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 493 KYRSLAAAVPLAVD 534
>gb|BQ765987.1|BQ765987 EBro03_SQ008_P18_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_P18 5', mRNA sequence
Length = 618
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 142 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 321
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 322 KYRSLAAAVPLAVD 363
>gb|BQ766074.1|BQ766074 EBro03_SQ008_P22_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_P22 5', mRNA sequence
Length = 610
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +3
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 231 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 410
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 411 KYRSLAAAVPLAVD 452
>gb|BU967663.1|BU967663 HB05A08r BC Hordeum vulgare subsp. vulgare cDNA clone HB05A08
5-PRIME, mRNA sequence
Length = 414
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +3
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 102 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 281
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 282 KYRSLAAAVPLAVD 323
>gb|BU967723.1|BU967723 HB05D07r BC Hordeum vulgare subsp. vulgare cDNA clone HB05D07
5-PRIME, mRNA sequence
Length = 337
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +3
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 102 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 281
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 282 KYRSLAAAVPLAVD 323
>gb|BU968978.1|BU968978 HB10C15r BC Hordeum vulgare subsp. vulgare cDNA clone HB10C15
5-PRIME, mRNA sequence
Length = 526
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 287 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 466
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 467 KYRSLAAAVPLAVD 508
>gb|BU975831.1|BU975831 HB32G24r BC Hordeum vulgare subsp. vulgare cDNA clone HB32G24
5-PRIME, mRNA sequence
Length = 443
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +3
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 57 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 236
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 237 KYRSLAAAVPLAVD 278
>gb|BU983536.1|BU983536 HA30B06r HA Hordeum vulgare subsp. vulgare cDNA clone HA30B06
5-PRIME, mRNA sequence
Length = 603
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 148 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 327
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 328 KYRSLAAAVPLAVD 369
>gb|BU986345.1|BU986345 HF11H21r HF Hordeum vulgare subsp. vulgare cDNA clone HF11H21
5-PRIME, mRNA sequence
Length = 607
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 298 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 477
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 478 KYRSLAAAVPLAVD 519
>gb|BU988196.1|BU988196 HF16O23r HF Hordeum vulgare subsp. vulgare cDNA clone HF16O23
5-PRIME, mRNA sequence
Length = 592
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 179 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 358
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 359 KYRSLAAAVPLAVD 400
>gb|CA000573.1|CA000573 HS08B05u HS Hordeum vulgare subsp. vulgare cDNA clone HS08B05
3-PRIME, mRNA sequence
Length = 556
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 487 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 308
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 307 KYRSLAAAVPLAVD 266
>gb|CA011241.1|CA011241 HT06L10u HT Hordeum vulgare subsp. vulgare cDNA clone HT06L10
3-PRIME, mRNA sequence
Length = 492
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 491 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 312
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 311 KYRSLAAAVPLAVD 270
>gb|CA014591.1|CA014591 HT11M11r HT Hordeum vulgare subsp. vulgare cDNA clone HT11M11
5-PRIME, mRNA sequence
Length = 533
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / -2
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 493 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 314
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 313 KYRSLAAAVPLAVD 272
>gb|CK125339.1|CK125339 BES1824107l18 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010L187 5-PRIME, mRNA sequence
Length = 783
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 268 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 447
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 448 KYRSLAAAVPLAVD 489
>gb|CK125495.1|CK125495 BES1824108m09 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M098 5-PRIME, mRNA sequence
Length = 622
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 154 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 333
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 334 KYRSLAAAVPLAVD 375
>emb|X65871.1|HVSSYNMR H.vulgare mRNA for sucrose synthase
Length = 2667
Score = 148 bits (318), Expect = 2e-035
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2 / +1
Query: 8 DPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFYIL 187
DP +W KIS GL+RIYEKYTWK+YSERLM L GVYGFWKYVS LERRETRRYLEMFY L
Sbjct: 2182 DPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYAL 2361
Query: 188 KFRELAKTVPLAID 229
K+R LA VPLA+D
Sbjct: 2362 KYRSLAAAVPLAVD 2403
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 236,768,424
Number of Sequences: 312970
Number of extensions: 3274528
Number of successful extensions: 80348
Number of sequences better than 1.0e-020: 172
length of database: 58,378,179
effective HSP length: 50
effective length of database: 42,729,679
effective search space used: 5597587949
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)