TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3071483.2.1
(531 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF627929.2|BF627929 HVSMEb0006K19f Hordeum vulgare seedl... 210 5e-054
gb|BU996454.1|BU996454 HM13K17r HM Hordeum vulgare subsp. v... 209 9e-054
gb|BF257180.2|BF257180 HVSMEf0012B18f Hordeum vulgare seedl... 209 1e-053
gb|BF259798.2|BF259798 HVSMEf0020E17f Hordeum vulgare seedl... 209 1e-053
gb|BF257301.3|BF257301 HVSMEf0012H16f Hordeum vulgare seedl... 209 1e-053
gb|BF260973.3|BF260973 HVSMEf0023G21f Hordeum vulgare seedl... 209 1e-053
gb|BM817085.1|BM817085 HC01F06_T3.ab1 HC Hordeum vulgare su... 209 1e-053
gb|BM372224.2|BM372224 EBro03_SQ004_F22_R root, 3 week, wat... 209 1e-053
gb|BQ763768.1|BQ763768 EBro03_SQ005_J07_R root, 3 week, wat... 209 1e-053
gb|BQ768251.1|BQ768251 EBro08_SQ011_M05_R root, 3 week, dro... 209 1e-053
gb|BF626638.3|BF626638 HVSMEa0018P12f Hordeum vulgare seedl... 207 3e-053
gb|BE060209.2|BE060209 HVSMEg0011J02f Hordeum vulgare pre-a... 207 4e-053
gb|BF265744.2|BF265744 HV_CEa0013D13f Hordeum vulgare seedl... 205 2e-052
gb|BF628119.3|BF628119 HVSMEb0003C23f Hordeum vulgare seedl... 204 2e-052
gb|BF255794.1|BF255794 HVSMEf0007N07f Hordeum vulgare seedl... 201 2e-051
gb|BM444307.1|BM444307 EBem09_SQ004_M10_R embryo, 1 Day ger... 201 3e-051
gb|BI777138.2|BI777138 EBro03_SQ002_B22_R root, 3 week, wat... 196 6e-050
gb|BI960428.1|BI960428 HVSMEn0024J02f Hordeum vulgare rachi... 189 8e-048
gb|BM369950.2|BM369950 EBro08_SQ002_H05_R root, 3 week, dro... 189 8e-048
gb|BI958660.1|BI958660 HVSMEn0016B18f Hordeum vulgare rachi... 187 4e-047
gb|BI960467.1|BI960467 HVSMEn0024L06f Hordeum vulgare rachi... 177 6e-044
gb|BQ766908.1|BQ766908 EBro08_SQ007_O12_R root, 3 week, dro... 106 4e-042
gb|BQ766335.1|BQ766335 EBro08_SQ005_N13_R root, 3 week, dro... 106 4e-042
gb|BF260771.3|BF260771 HVSMEf0022O11f Hordeum vulgare seedl... 170 5e-042
gb|BF263225.2|BF263225 HV_CEa0006C22f Hordeum vulgare seedl... 104 1e-041
gb|BM372222.2|BM372222 EBro03_SQ004_F20_R root, 3 week, wat... 104 2e-041
gb|BI778783.2|BI778783 EBro01_SQ001_H14_R root, 3 week, hyd... 107 2e-041
gb|BI777432.2|BI777432 EBro04_SQ001_D11_R root, 3 week, sal... 107 2e-041
gb|BQ766568.1|BQ766568 EBro08_SQ006_P09 _R root, 3 week, dr... 107 3e-041
gb|BF258553.2|BF258553 HVSMEf0016A19f Hordeum vulgare seedl... 103 4e-041
gb|BF065110.2|BF065110 HV_CEb0023A22f Hordeum vulgare seedl... 160 4e-039
gb|BJ465566.1|BJ465566 BJ465566 K. Sato unpublished cDNA li... 106 8e-039
gb|BI778861.2|BI778861 EBro01_SQ001_M16_R root, 3 week, hyd... 153 2e-038
gb|BI957407.1|BI957407 HVSMEn0009G07f Hordeum vulgare rachi... 149 1e-035
gb|BJ462736.1|BJ462736 BJ462736 K. Sato unpublished cDNA li... 106 4e-035
gb|BQ761559.1|BQ761559 EBem10_SQ001_H05_R embryo, 2 Day ger... 106 9e-033
gb|BF260839.3|BF260839 HVSMEf0023B07f Hordeum vulgare seedl... 78 2e-031
gb|BI960465.1|BI960465 HVSMEn0024L04f Hordeum vulgare rachi... 128 2e-029
gb|BQ767572.1|BQ767572 EBro08_SQ009_D08_R root, 3 week, dro... 125 2e-028
gb|BM443669.2|BM443669 EBem09_SQ001_B17_R embryo, 1 Day ger... 105 4e-026
gb|BQ468701.1|BQ468701 HM02A22r HM Hordeum vulgare subsp. v... 102 6e-025
gb|BI959480.1|BI959480 HVSMEn0019N11f Hordeum vulgare rachi... 108 3e-023
gb|BQ661125.1|BQ661125 HM02A22u HM Hordeum vulgare subsp. v... 100 6e-021
gb|BQ761680.1|BQ761680 EBem10_SQ001_D16_R embryo, 2 Day ger... 100 6e-021
>gb|BF627929.2|BF627929 HVSMEb0006K19f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0006K19f, mRNA sequence
Length = 792
Score = 210 bits (453), Expect = 5e-054
Identities = 83/97 (85%), Positives = 90/97 (92%)
Frame = -2 / +2
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGRAS DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 137 LGEGAGECGRASPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 316
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
A+ AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*+
Sbjct: 317 AKMAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*V 427
Score = 177 bits (382), Expect = 3e-044
Identities = 78/92 (84%), Positives = 81/92 (88%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 420 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 241
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ A S +ALPHSP P
Sbjct: 240 EGAESGSSAAEMHGAMRRAIRSGDALPHSPAP 145
Score = 169 bits (363), Expect = 1e-041
Identities = 66/95 (69%), Positives = 69/95 (72%)
Frame = +2 / -2
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
T + +AACNLRTCSRRGGRPCCSAWGW*WRP A*SR WRCRTA*RRTGSWGS RWCA
Sbjct: 440 TRAGPLKAACNLRTCSRRGGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCA 261
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSSCW A + R PRC P P R SRT
Sbjct: 260 PPSSSCWRAPSPARPPPRCTGPCAGPSGRGTPSRT 156
Score = 151 bits (324), Expect = 3e-036
Identities = 68/104 (65%), Positives = 74/104 (71%)
Frame = -1 / +1
Query: 522 RRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAV 343
R G VRE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAV
Sbjct: 130 RGAGRGGRRVREGVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAV 309
Query: 342 RHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
RHRQ RDQA GRH+HPQALQHGRPPRRLQVRRLHAAL+ +V
Sbjct: 310 RHRQDGRDQARGRHHHPQALQHGRPPRRLQVRRLHAALSGPALV 441
>gb|BU996454.1|BU996454 HM13K17r HM Hordeum vulgare subsp. vulgare cDNA clone HM13K17
5-PRIME, mRNA sequence
Length = 534
Score = 209 bits (451), Expect = 9e-054
Identities = 82/99 (82%), Positives = 91/99 (91%)
Frame = -2 / +2
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 110 LGEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 289
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*LMK 219
A+ AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*+ +
Sbjct: 290 AKMAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*VAR 406
Score = 175 bits (376), Expect = 2e-043
Identities = 77/92 (83%), Positives = 80/92 (86%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 393 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 214
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ A S + LPHSP P
Sbjct: 213 EGAESGSSAAEMHGAMRRAIRSGDDLPHSPAP 118
Score = 170 bits (365), Expect = 7e-042
Identities = 66/95 (69%), Positives = 69/95 (72%)
Frame = +2 / -2
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
T + +AACNLRTCSRRGGRPCCSAWGW*WRP A*SR WRCRTA*RRTGSWGS RWCA
Sbjct: 413 TRAGPLKAACNLRTCSRRGGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCA 234
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSSCW A + R PRC P P R SRT
Sbjct: 233 PPSSSCWRAPSPARPPPRCTGPCAGPSGRGTTSRT 129
Score = 150 bits (322), Expect = 6e-036
Identities = 68/104 (65%), Positives = 74/104 (71%)
Frame = -1 / +1
Query: 522 RRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAV 343
R G VRE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAV
Sbjct: 103 RGAGRGGRRVREVVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAV 282
Query: 342 RHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
RHRQ RDQA GRH+HPQALQHGRPPRRLQVRRLHAAL+ +V
Sbjct: 283 RHRQDGRDQARGRHHHPQALQHGRPPRRLQVRRLHAALSGPALV 414
>gb|BF257180.2|BF257180 HVSMEf0012B18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0012B18f, mRNA sequence
Length = 540
Score = 209 bits (450), Expect = 1e-053
Identities = 82/97 (84%), Positives = 90/97 (92%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 127 LGEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 306
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
A+ AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*+
Sbjct: 307 AKMAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*V 417
Score = 173 bits (373), Expect = 5e-043
Identities = 76/92 (82%), Positives = 80/92 (86%)
Frame = +1 / -2
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 410 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 231
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAA+MHGA+ A S + LPHSP P
Sbjct: 230 EGAESGSSAADMHGAMRRAIRSGDDLPHSPAP 135
Score = 166 bits (357), Expect = 8e-041
Identities = 65/95 (68%), Positives = 68/95 (71%)
Frame = +2 / -3
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
T + +AACNLRTCSRRGGRPCCSAWGW*WRP A*SR WRCRTA*RRTGSWGS RWCA
Sbjct: 430 TRAGPLKAACNLRTCSRRGGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCA 251
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSSCW A + R P C P P R SRT
Sbjct: 250 PPSSSCWRAPSPARPPPICTGPCAGPSGRGTTSRT 146
Score = 149 bits (320), Expect = 1e-035
Identities = 67/104 (64%), Positives = 74/104 (71%)
Frame = -1 / +3
Query: 522 RRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAV 343
R G VRE + R G G +H+G R + A QQLLL AHHR EPQLPVRRHAV
Sbjct: 120 RGAGRGGRRVREVVPRPDGPAHGPVHIGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAV 299
Query: 342 RHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
RHRQ RDQA GRH+HPQALQHGRPPRRLQVRRLHAAL+ +V
Sbjct: 300 RHRQDGRDQARGRHHHPQALQHGRPPRRLQVRRLHAALSGPALV 431
>gb|BF259798.2|BF259798 HVSMEf0020E17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020E17f, mRNA sequence
Length = 534
Score = 209 bits (450), Expect = 1e-053
Identities = 82/97 (84%), Positives = 90/97 (92%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 133 LGEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 312
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
A+ AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*+
Sbjct: 313 AKMAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*V 423
Score = 175 bits (376), Expect = 2e-043
Identities = 77/92 (83%), Positives = 80/92 (86%)
Frame = +1 / -2
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 416 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 237
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ A S + LPHSP P
Sbjct: 236 EGAESGSSAAEMHGAMRRAIRSGDDLPHSPAP 141
Score = 170 bits (365), Expect = 7e-042
Identities = 66/95 (69%), Positives = 69/95 (72%)
Frame = +2 / -3
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
T + +AACNLRTCSRRGGRPCCSAWGW*WRP A*SR WRCRTA*RRTGSWGS RWCA
Sbjct: 436 TRAGPLKAACNLRTCSRRGGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCA 257
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSSCW A + R PRC P P R SRT
Sbjct: 256 PPSSSCWRAPSPARPPPRCTGPCAGPSGRGTTSRT 152
Score = 150 bits (322), Expect = 6e-036
Identities = 68/104 (65%), Positives = 74/104 (71%)
Frame = -1 / +3
Query: 522 RRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAV 343
R G VRE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAV
Sbjct: 126 RGAGRGGRRVREVVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAV 305
Query: 342 RHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
RHRQ RDQA GRH+HPQALQHGRPPRRLQVRRLHAAL+ +V
Sbjct: 306 RHRQDGRDQARGRHHHPQALQHGRPPRRLQVRRLHAALSGPALV 437
>gb|BF257301.3|BF257301 HVSMEf0012H16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0012H16f, mRNA sequence
Length = 537
Score = 209 bits (450), Expect = 1e-053
Identities = 82/97 (84%), Positives = 90/97 (92%)
Frame = -2 / +2
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 23 LGEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 202
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
A+ AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*+
Sbjct: 203 AKMAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*V 313
Score = 175 bits (376), Expect = 2e-043
Identities = 77/92 (83%), Positives = 80/92 (86%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 306 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 127
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ A S + LPHSP P
Sbjct: 126 EGAESGSSAAEMHGAMRRAIRSGDDLPHSPAP 31
Score = 170 bits (365), Expect = 7e-042
Identities = 66/95 (69%), Positives = 69/95 (72%)
Frame = +2 / -2
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
T + +AACNLRTCSRRGGRPCCSAWGW*WRP A*SR WRCRTA*RRTGSWGS RWCA
Sbjct: 326 TRAGPLKAACNLRTCSRRGGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCA 147
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSSCW A + R PRC P P R SRT
Sbjct: 146 PPSSSCWRAPSPARPPPRCTGPCAGPSGRGTTSRT 42
Score = 150 bits (322), Expect = 6e-036
Identities = 68/104 (65%), Positives = 74/104 (71%)
Frame = -1 / +1
Query: 522 RRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAV 343
R G VRE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAV
Sbjct: 16 RGAGRGGRRVREVVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAV 195
Query: 342 RHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
RHRQ RDQA GRH+HPQALQHGRPPRRLQVRRLHAAL+ +V
Sbjct: 196 RHRQDGRDQARGRHHHPQALQHGRPPRRLQVRRLHAALSGPALV 327
>gb|BF260973.3|BF260973 HVSMEf0023G21f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023G21f, mRNA sequence
Length = 651
Score = 209 bits (450), Expect = 1e-053
Identities = 82/97 (84%), Positives = 90/97 (92%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 130 LGEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 309
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
A+ AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*+
Sbjct: 310 AKMAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*V 420
Score = 175 bits (376), Expect(2) = 4e-044
Identities = 77/92 (83%), Positives = 80/92 (86%)
Frame = +1 / -2
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 413 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 234
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ A S + LPHSP P
Sbjct: 233 EGAESGSSAAEMHGAMRRAIRSGDDLPHSPAP 138
Score = 170 bits (365), Expect(2) = 4e-042
Identities = 66/95 (69%), Positives = 69/95 (72%)
Frame = +2 / -3
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
T + +AACNLRTCSRRGGRPCCSAWGW*WRP A*SR WRCRTA*RRTGSWGS RWCA
Sbjct: 433 TRAGPLKAACNLRTCSRRGGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCA 254
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSSCW A + R PRC P P R SRT
Sbjct: 253 PPSSSCWRAPSPARPPPRCTGPCAGPSGRGTTSRT 149
Score = 150 bits (322), Expect = 6e-036
Identities = 68/104 (65%), Positives = 74/104 (71%)
Frame = -1 / +3
Query: 522 RRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAV 343
R G VRE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAV
Sbjct: 123 RGAGRGGRRVREVVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAV 302
Query: 342 RHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
RHRQ RDQA GRH+HPQALQHGRPPRRLQVRRLHAAL+ +V
Sbjct: 303 RHRQDGRDQARGRHHHPQALQHGRPPRRLQVRRLHAALSGPALV 434
Score = 24.0 bits (46), Expect(2) = 4e-044
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3 / -2
Query: 9 FFFFLYERNGTYLTYNTQAK 68
FFFF + T++ NT+ K
Sbjct: 650 FFFFFFFHTETFVHVNTETK 591
Score = 22.1 bits (42), Expect(2) = 4e-042
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1 / -1
Query: 1 FFFFFFSY 24
FFFFFFS+
Sbjct: 648 FFFFFFSH 625
>gb|BM817085.1|BM817085 HC01F06_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC01F06_T3.ab1 similar to (AC007661) hypothetical
protein [Arabidopsis thaliana], mRNA sequence
Length = 768
Score = 209 bits (450), Expect = 1e-053
Identities = 82/97 (84%), Positives = 90/97 (92%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 121 LGEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 300
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
A+ AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*+
Sbjct: 301 AKMAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*V 411
Score = 175 bits (376), Expect = 2e-043
Identities = 77/92 (83%), Positives = 80/92 (86%)
Frame = +1 / -2
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 404 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 225
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ A S + LPHSP P
Sbjct: 224 EGAESGSSAAEMHGAMRRAIRSGDDLPHSPAP 129
Score = 170 bits (365), Expect = 7e-042
Identities = 66/95 (69%), Positives = 69/95 (72%)
Frame = +2 / -3
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
T + +AACNLRTCSRRGGRPCCSAWGW*WRP A*SR WRCRTA*RRTGSWGS RWCA
Sbjct: 424 TRAGPLKAACNLRTCSRRGGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCA 245
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSSCW A + R PRC P P R SRT
Sbjct: 244 PPSSSCWRAPSPARPPPRCTGPCAGPSGRGTTSRT 140
Score = 149 bits (321), Expect = 8e-036
Identities = 66/95 (69%), Positives = 72/95 (75%)
Frame = -1 / +3
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQ 316
VRE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAVRHRQ RDQ
Sbjct: 141 VREVVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAVRHRQDGRDQ 320
Query: 315 AGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
A GRH+HPQALQHGRPPRRLQVRRLHAAL+ +V
Sbjct: 321 ARGRHHHPQALQHGRPPRRLQVRRLHAALSGPALV 425
>gb|BM372224.2|BM372224 EBro03_SQ004_F22_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_F22 5', mRNA sequence
Length = 436
Score = 209 bits (450), Expect = 1e-053
Identities = 82/97 (84%), Positives = 90/97 (92%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 142 LGEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 321
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
A+ AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*+
Sbjct: 322 AKMAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*V 432
Score = 175 bits (376), Expect(2) = 5e-043
Identities = 77/92 (83%), Positives = 80/92 (86%)
Frame = +1 / -3
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 425 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 246
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ A S + LPHSP P
Sbjct: 245 EGAESGSSAAEMHGAMRRAIRSGDDLPHSPAP 150
Score = 168 bits (362), Expect = 2e-041
Identities = 65/89 (73%), Positives = 67/89 (75%)
Frame = +2 / -1
Query: 230 RAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSC 409
+AACNLRTCSRRGGRPCCSAWGW*WRP A*SR WRCRTA*RRTGSWGS RWCA SSSC
Sbjct: 427 KAACNLRTCSRRGGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCAPPSSSC 248
Query: 410 WSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
W A + R PRC P P R SRT
Sbjct: 247 WRAPSPARPPPRCTGPCAGPSGRGTTSRT 161
Score = 149 bits (320), Expect = 1e-035
Identities = 65/90 (72%), Positives = 70/90 (77%)
Frame = -1 / +3
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQ 316
VRE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAVRHRQ RDQ
Sbjct: 162 VREVVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAVRHRQDGRDQ 341
Query: 315 AGGRHYHPQALQHGRPPRRLQVRRLHAALA 226
A GRH+HPQALQHGRPPRRLQVRRLHAAL+
Sbjct: 342 ARGRHHHPQALQHGRPPRRLQVRRLHAALS 431
Score = 18.5 bits (34), Expect(2) = 5e-043
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1 / -3
Query: 496 SPXPCATPA 522
+P P ATPA
Sbjct: 155 APSPSATPA 129
>gb|BQ763768.1|BQ763768 EBro03_SQ005_J07_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_J07 5', mRNA sequence
Length = 628
Score = 209 bits (450), Expect = 1e-053
Identities = 82/97 (84%), Positives = 90/97 (92%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 139 LGEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 318
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
A+ AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*+
Sbjct: 319 AKMAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*V 429
Score = 175 bits (376), Expect = 2e-043
Identities = 77/92 (83%), Positives = 80/92 (86%)
Frame = +1 / -3
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 422 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 243
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ A S + LPHSP P
Sbjct: 242 EGAESGSSAAEMHGAMRRAIRSGDDLPHSPAP 147
Score = 170 bits (365), Expect = 7e-042
Identities = 66/95 (69%), Positives = 69/95 (72%)
Frame = +2 / -1
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
T + +AACNLRTCSRRGGRPCCSAWGW*WRP A*SR WRCRTA*RRTGSWGS RWCA
Sbjct: 442 TRAGPLKAACNLRTCSRRGGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCA 263
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSSCW A + R PRC P P R SRT
Sbjct: 262 PPSSSCWRAPSPARPPPRCTGPCAGPSGRGTTSRT 158
Score = 149 bits (321), Expect = 8e-036
Identities = 66/95 (69%), Positives = 72/95 (75%)
Frame = -1 / +3
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQ 316
VRE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAVRHRQ RDQ
Sbjct: 159 VREVVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAVRHRQDGRDQ 338
Query: 315 AGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
A GRH+HPQALQHGRPPRRLQVRRLHAAL+ +V
Sbjct: 339 ARGRHHHPQALQHGRPPRRLQVRRLHAALSGPALV 443
>gb|BQ768251.1|BQ768251 EBro08_SQ011_M05_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_M05 5', mRNA sequence
Length = 523
Score = 209 bits (450), Expect = 1e-053
Identities = 82/97 (84%), Positives = 90/97 (92%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 139 LGEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 318
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
A+ AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*+
Sbjct: 319 AKMAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*V 429
Score = 175 bits (376), Expect = 2e-043
Identities = 77/92 (83%), Positives = 80/92 (86%)
Frame = +1 / -3
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 422 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 243
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ A S + LPHSP P
Sbjct: 242 EGAESGSSAAEMHGAMRRAIRSGDDLPHSPAP 147
Score = 170 bits (365), Expect = 7e-042
Identities = 66/95 (69%), Positives = 69/95 (72%)
Frame = +2 / -1
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
T + +AACNLRTCSRRGGRPCCSAWGW*WRP A*SR WRCRTA*RRTGSWGS RWCA
Sbjct: 442 TRAGPLKAACNLRTCSRRGGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCA 263
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSSCW A + R PRC P P R SRT
Sbjct: 262 PPSSSCWRAPSPARPPPRCTGPCAGPSGRGTTSRT 158
Score = 149 bits (321), Expect = 8e-036
Identities = 66/95 (69%), Positives = 72/95 (75%)
Frame = -1 / +3
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQ 316
VRE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAVRHRQ RDQ
Sbjct: 159 VREVVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAVRHRQDGRDQ 338
Query: 315 AGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
A GRH+HPQALQHGRPPRRLQVRRLHAAL+ +V
Sbjct: 339 ARGRHHHPQALQHGRPPRRLQVRRLHAALSGPALV 443
>gb|BF626638.3|BF626638 HVSMEa0018P12f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0018P12f, mRNA sequence
Length = 763
Score = 207 bits (447), Expect = 3e-053
Identities = 81/97 (83%), Positives = 90/97 (92%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR++ DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 130 LGEGAGECGRSAPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 309
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
A+ AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*+
Sbjct: 310 AKMAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*V 420
Score = 173 bits (373), Expect = 5e-043
Identities = 77/92 (83%), Positives = 79/92 (85%)
Frame = +1 / -3
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 413 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 234
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ A S LPHSP P
Sbjct: 233 EGAESGSSAAEMHGAMRRAIRSGADLPHSPAP 138
Score = 169 bits (364), Expect = 9e-042
Identities = 66/95 (69%), Positives = 69/95 (72%)
Frame = +2 / -1
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
T + +AACNLRTCSRRGGRPCCSAWGW*WRP A*SR WRCRTA*RRTGSWGS RWCA
Sbjct: 433 TRAGPLKAACNLRTCSRRGGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCA 254
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSSCW A + R PRC P P R SRT
Sbjct: 253 PPSSSCWRAPSPARPPPRCTGPCAGPSGRGPTSRT 149
Score = 148 bits (317), Expect = 3e-035
Identities = 68/104 (65%), Positives = 73/104 (70%)
Frame = -1 / +3
Query: 522 RRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAV 343
R G VRE R G G +HLG R + A QQLLL AHHR EPQLPVRRHAV
Sbjct: 123 RGAGRGGRRVREVGPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAV 302
Query: 342 RHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
RHRQ RDQA GRH+HPQALQHGRPPRRLQVRRLHAAL+ +V
Sbjct: 303 RHRQDGRDQARGRHHHPQALQHGRPPRRLQVRRLHAALSGPALV 434
>gb|BE060209.2|BE060209 HVSMEg0011J02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011J02f, mRNA sequence
Length = 542
Score = 207 bits (446), Expect = 4e-053
Identities = 81/97 (83%), Positives = 89/97 (91%)
Frame = -2 / +3
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 141 LGEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 320
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
A+ AGIKPEV ITIPKRCNMADRPVGYKCGDYTLP*+
Sbjct: 321 AKMAGIKPEVGITIPKRCNMADRPVGYKCGDYTLP*V 431
Score = 172 bits (371), Expect = 1e-042
Identities = 76/92 (82%), Positives = 79/92 (85%)
Frame = +1 / -2
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVM TSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 424 GSV*SPHL*PTGRSAMLQRLGMVMPTSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 245
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ A S + LPHSP P
Sbjct: 244 EGAESGSSAAEMHGAMRRAIRSGDDLPHSPAP 149
Score = 164 bits (352), Expect = 4e-040
Identities = 65/95 (68%), Positives = 68/95 (71%)
Frame = +2 / -3
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
T + +AACNLRTCSRRGGRPCCSAWGW* RP A*SR WRCRTA*RRTGSWGS RWCA
Sbjct: 444 TRAGPLKAACNLRTCSRRGGRPCCSAWGW*CRPRA*SRPSWRCRTA*RRTGSWGSCRWCA 265
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSSCW A + R PRC P P R SRT
Sbjct: 264 PPSSSCWRAPSPARPPPRCTGPCAGPSGRGTTSRT 160
Score = 150 bits (322), Expect = 6e-036
Identities = 68/104 (65%), Positives = 74/104 (71%)
Frame = -1 / +2
Query: 522 RRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAV 343
R G VRE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAV
Sbjct: 134 RGAGRGGRRVREVVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAV 313
Query: 342 RHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
RHRQ RDQA GRH+HPQALQHGRPPRRLQVRRLHAAL+ +V
Sbjct: 314 RHRQDGRDQARGRHHHPQALQHGRPPRRLQVRRLHAALSGPALV 445
>gb|BF265744.2|BF265744 HV_CEa0013D13f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013D13f, mRNA sequence
Length = 569
Score = 205 bits (442), Expect = 2e-052
Identities = 81/97 (83%), Positives = 89/97 (91%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 115 LGEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 294
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
A+ AGIKPEVAITIPKRC MADRPVGYKCGDYTLP*+
Sbjct: 295 AKMAGIKPEVAITIPKRCYMADRPVGYKCGDYTLP*V 405
Score = 171 bits (368), Expect = 3e-042
Identities = 76/92 (82%), Positives = 79/92 (85%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAM QRLGMVMATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 398 GSV*SPHL*PTGRSAM*QRLGMVMATSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 219
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ A S + LPHSP P
Sbjct: 218 EGAESGSSAAEMHGAMRRAIRSGDDLPHSPAP 123
Score = 165 bits (355), Expect = 2e-040
Identities = 65/95 (68%), Positives = 68/95 (71%)
Frame = +2 / -2
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
T + +AACNLRTCSRRGGRPC SAWGW*WRP A*SR WRCRTA*RRTGSWGS RWCA
Sbjct: 418 TRAGPLKAACNLRTCSRRGGRPCSSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCA 239
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSSCW A + R PRC P P R SRT
Sbjct: 238 PPSSSCWRAPSPARPPPRCTGPCAGPSGRGTTSRT 134
Score = 147 bits (315), Expect = 5e-035
Identities = 67/104 (64%), Positives = 73/104 (70%)
Frame = -1 / +3
Query: 522 RRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAV 343
R G VRE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAV
Sbjct: 108 RGAGRGGRRVREVVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAV 287
Query: 342 RHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
RHRQ RDQA GRH+HPQAL HGRPPRRLQVRRLHAAL+ +V
Sbjct: 288 RHRQDGRDQARGRHHHPQALLHGRPPRRLQVRRLHAALSGPALV 419
>gb|BF628119.3|BF628119 HVSMEb0003C23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0003C23f, mRNA sequence
Length = 492
Score = 204 bits (441), Expect = 2e-052
Identities = 81/97 (83%), Positives = 89/97 (91%)
Frame = -2 / +2
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 137 LGEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 316
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
A+ AGIKPEVAITI KRCNMADRPVGYKCGDYTLP*+
Sbjct: 317 AKMAGIKPEVAITIRKRCNMADRPVGYKCGDYTLP*V 427
Score = 171 bits (368), Expect = 3e-042
Identities = 76/92 (82%), Positives = 79/92 (85%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRL MVMATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 420 GSV*SPHL*PTGRSAMLQRLRMVMATSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 241
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ A S + LPHSP P
Sbjct: 240 EGAESGSSAAEMHGAMRRAIRSGDDLPHSPAP 145
Score = 164 bits (352), Expect = 4e-040
Identities = 65/95 (68%), Positives = 68/95 (71%)
Frame = +2 / -2
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
T + +AACNLRTCSRRGGRPCCSA GW*WRP A*SR WRCRTA*RRTGSWGS RWCA
Sbjct: 440 TRAGPLKAACNLRTCSRRGGRPCCSACGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCA 261
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSSCW A + R PRC P P R SRT
Sbjct: 260 PPSSSCWRAPSPARPPPRCTGPCAGPSGRGTTSRT 156
Score = 150 bits (322), Expect = 6e-036
Identities = 68/104 (65%), Positives = 74/104 (71%)
Frame = -1 / +1
Query: 522 RRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAV 343
R G VRE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAV
Sbjct: 130 RGAGRGGRRVREVVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAV 309
Query: 342 RHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
RHRQ RDQA GRH+HPQALQHGRPPRRLQVRRLHAAL+ +V
Sbjct: 310 RHRQDGRDQARGRHHHPQALQHGRPPRRLQVRRLHAALSGPALV 441
>gb|BF255794.1|BF255794 HVSMEf0007N07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0007N07f, mRNA sequence
Length = 1011
Score = 201 bits (434), Expect = 2e-051
Identities = 78/94 (82%), Positives = 87/94 (92%)
Frame = -2 / +2
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 257 LGEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 436
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTL 234
A+ AGIKPEV+ITIPKRCNMADRPVGYKCG+YTL
Sbjct: 437 AKMAGIKPEVSITIPKRCNMADRPVGYKCGEYTL 538
Score = 167 bits (360), Expect = 3e-041
Identities = 74/91 (81%), Positives = 77/91 (84%)
Frame = +1 / -1
Query: 235 SV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLV 414
SV SPHL*PTGRSAMLQRLGMVM TSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 537 SVYSPHL*PTGRSAMLQRLGMVMETSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLLE 358
Query: 415 GVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ A S + LPHSP P
Sbjct: 357 GAESGSSAAEMHGAMRRAIRSGDDLPHSPAP 265
Score = 159 bits (342), Expect = 1e-038
Identities = 62/89 (69%), Positives = 64/89 (71%)
Frame = +2 / -2
Query: 230 RAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSC 409
+ AC LRTCSRR GRPCCSAWGW*WRP A*SR WRCRTA*RRTGSWGS RWCA SSSC
Sbjct: 542 KTACILRTCSRRDGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCAPPSSSC 363
Query: 410 WSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
W A + R PRC P P R SRT
Sbjct: 362 WRAPSPARPPPRCTGPCAGPSGRGTTSRT 276
Score = 139 bits (299), Expect = 8e-033
Identities = 63/98 (64%), Positives = 68/98 (69%)
Frame = -1 / +1
Query: 522 RRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAV 343
R G VRE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAV
Sbjct: 250 RGAGRGGRRVREVVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAV 429
Query: 342 RHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAAL 229
RHRQ RDQA G H+HPQALQHGRP RRLQVRR+HA L
Sbjct: 430 RHRQDGRDQARGLHHHPQALQHGRPSRRLQVRRIHAVL 543
>gb|BM444307.1|BM444307 EBem09_SQ004_M10_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ004_M10 5', mRNA sequence
Length = 410
Score = 201 bits (433), Expect = 3e-051
Identities = 78/93 (83%), Positives = 85/93 (91%)
Frame = -2 / +3
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 132 LGEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 311
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYT 237
A+ AGIKPEV ITIPKRCNMADRPVGYKCGDYT
Sbjct: 312 AKMAGIKPEVVITIPKRCNMADRPVGYKCGDYT 410
Score = 168 bits (362), Expect(2) = 4e-041
Identities = 74/90 (82%), Positives = 77/90 (85%)
Frame = +1 / -2
Query: 238 V*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVG 417
V*SPHL*PTGRSAMLQRLGMVM TSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL G
Sbjct: 409 V*SPHL*PTGRSAMLQRLGMVMTTSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLLEG 230
Query: 418 VDCGSSAAEMHGAILSATLSAEALPHSPXP 507
+ GSSAAEMHGA+ A S + LPHSP P
Sbjct: 229 AESGSSAAEMHGAMRRAIRSGDDLPHSPAP 140
Score = 154 bits (330), Expect = 4e-037
Identities = 61/86 (70%), Positives = 62/86 (72%)
Frame = +2 / -3
Query: 239 CNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSCWSA 418
CNLRTCSRR GRPCCSAWGW* RP A*SR WRCRTA*RRTGSWGS RWCA SSSCW A
Sbjct: 408 CNLRTCSRRDGRPCCSAWGW**RPRA*SRPSWRCRTA*RRTGSWGSCRWCAPPSSSCWRA 229
Query: 419 WTAGRRQPRCMAPSLAPPCRRRLSRT 496
+ R PRC P P R SRT
Sbjct: 228 PSPARPPPRCTGPCAGPSGRGTTSRT 151
Score = 139 bits (299), Expect = 8e-033
Identities = 61/86 (70%), Positives = 65/86 (75%)
Frame = -1 / +2
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQ 316
VRE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAVRHRQ RDQ
Sbjct: 152 VREVVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAVRHRQDGRDQ 331
Query: 315 AGGRHYHPQALQHGRPPRRLQVRRLH 238
A GRH+HPQALQHGRP RRLQVRRLH
Sbjct: 332 ARGRHHHPQALQHGRPSRRLQVRRLH 409
Score = 18.5 bits (34), Expect(2) = 4e-041
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1 / -2
Query: 496 SPXPCATPA 522
+P P ATPA
Sbjct: 145 APSPSATPA 119
>gb|BI777138.2|BI777138 EBro03_SQ002_B22_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ002_B22 5', mRNA sequence
Length = 273
Score = 196 bits (423), Expect = 6e-050
Identities = 78/89 (87%), Positives = 85/89 (95%)
Frame = -2 / +3
Query: 491 GRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKP 312
GR+S DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGTA+ AGIKP
Sbjct: 3 GRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGTAKMAGIKP 182
Query: 311 EVAITIPKRCNMADRPVGYKCGDYTLP*L 225
EVAITIPKRCNMADRPVGYKCGDYTLP*+
Sbjct: 183 EVAITIPKRCNMADRPVGYKCGDYTLP*V 269
Score = 166 bits (357), Expect = 8e-041
Identities = 64/88 (72%), Positives = 66/88 (75%)
Frame = +2 / -1
Query: 230 RAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSC 409
+AACNLRTCSRRGGRPCCSAWGW*WRP A*SR WRCRTA*RRTGSWGS RWCA SSSC
Sbjct: 264 KAACNLRTCSRRGGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCAPPSSSC 85
Query: 410 WSAWTAGRRQPRCMAPSLAPPCRRRLSR 493
W A + R PRC P P R SR
Sbjct: 84 WRAPSPARPPPRCTGPCAGPSGRGTTSR 1
Score = 163 bits (350), Expect = 8e-040
Identities = 73/87 (83%), Positives = 76/87 (87%)
Frame = +1 / -3
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 262 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 83
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALP 492
G + GSSAAEMHGA+ A S + LP
Sbjct: 82 EGAESGSSAAEMHGAMRRAIRSGDDLP 2
Score = 147 bits (316), Expect = 4e-035
Identities = 64/89 (71%), Positives = 69/89 (77%)
Frame = -1 / +2
Query: 492 RESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQA 313
RE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAVRHRQ RDQA
Sbjct: 2 REVVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAVRHRQDGRDQA 181
Query: 312 GGRHYHPQALQHGRPPRRLQVRRLHAALA 226
GRH+HPQALQHGRPPRRLQVRRLHAAL+
Sbjct: 182 RGRHHHPQALQHGRPPRRLQVRRLHAALS 268
>gb|BI960428.1|BI960428 HVSMEn0024J02f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024J02f, mRNA sequence
Length = 621
Score = 189 bits (408), Expect = 8e-048
Identities = 76/97 (78%), Positives = 83/97 (85%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S DR+AL MAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 133 LGEGAGECGRSSPDRMALLMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 312
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
AGIKPE ITIPKRCNMADRPV YKCG YTLP*+
Sbjct: 313 DNMAGIKPEDPITIPKRCNMADRPVRYKCGHYTLP*V 423
Score = 165 bits (354), Expect = 2e-040
Identities = 73/92 (79%), Positives = 77/92 (83%)
Frame = +1 / -2
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV* PHL* TGRSAMLQRLGMVM +SGLIPA L+VPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 416 GSV*CPHL*RTGRSAMLQRLGMVMGSSGLIPAMLSVPDSMTAHRQLGLLPMVCTAEQQLL 237
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ A S E LPHSP P
Sbjct: 236 EGAESGSSAAEMHGAMSRAIRSGEDLPHSPAP 141
Score = 149 bits (320), Expect = 1e-035
Identities = 61/95 (64%), Positives = 65/95 (68%)
Frame = +2 / -3
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
T + +AACN+RTCS RGGRPCCSAWGW*W A*SR RCRTA*RRTGSWGS RWCA
Sbjct: 436 TRAGPLKAACNVRTCSVRGGRPCCSAWGW*WGLRA*SRPCCRCRTA*RRTGSWGSCRWCA 257
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSSCW A + R PRC P P R R RT
Sbjct: 256 PPSSSCWRAPSPARPPPRCTGP*AGPSGRGRTCRT 152
Score = 137 bits (294), Expect = 4e-032
Identities = 64/104 (61%), Positives = 70/104 (67%)
Frame = -1 / +3
Query: 522 RRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAV 343
R G VR+ L R G G +HLG R + A QQLLL AHHR EPQLPVRRHAV
Sbjct: 126 RGAGRGGRRVRQVLPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAV 305
Query: 342 RHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
RHRQ RDQA H+HPQALQHGRPPR LQVR LHAAL+ +V
Sbjct: 306 RHRQHGRDQARRPHHHPQALQHGRPPRTLQVRTLHAALSGPALV 437
>gb|BM369950.2|BM369950 EBro08_SQ002_H05_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ002_H05 5', mRNA sequence
Length = 278
Score = 189 bits (408), Expect = 8e-048
Identities = 75/84 (89%), Positives = 81/84 (96%)
Frame = -2 / +3
Query: 476 DRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAIT 297
DR+ALRMAPCISAAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGTA+ AGIKPEVAIT
Sbjct: 6 DRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGTAKMAGIKPEVAIT 185
Query: 296 IPKRCNMADRPVGYKCGDYTLP*L 225
IPKRCNMADRPVGYKCGDYTLP*+
Sbjct: 186 IPKRCNMADRPVGYKCGDYTLP*V 257
Score = 165 bits (355), Expect = 2e-040
Identities = 63/89 (70%), Positives = 66/89 (74%)
Frame = +2 / -3
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
T + +AACNLRTCSRRGGRPCCSAWGW*WRP A*SR WRCRTA*RRTGSWGS RWCA
Sbjct: 270 TRAGPLKAACNLRTCSRRGGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCRWCA 91
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCR 478
SSSCW A + R PRC P P R
Sbjct: 90 PPSSSCWRAPSPARPPPRCTGPCAGPSGR 4
Score = 158 bits (339), Expect = 3e-038
Identities = 71/82 (86%), Positives = 73/82 (89%)
Frame = +1 / -2
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQLL
Sbjct: 250 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAILAVPDSMTAHRQLGLLPMVCTAEQQLL 71
Query: 412 VGVDCGSSAAEMHGAILSATLS 477
G + GSSAAEMHGA+ A S
Sbjct: 70 EGAESGSSAAEMHGAMRRAIRS 5
Score = 144 bits (310), Expect = 3e-034
Identities = 63/89 (70%), Positives = 68/89 (76%)
Frame = -1 / +2
Query: 477 RQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQAGGRHY 298
R G G +HLG R + A QQLLL AHHR EPQLPVRRHAVRHRQ RDQA GRH+
Sbjct: 5 RPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAVRHRQDGRDQARGRHH 184
Query: 297 HPQALQHGRPPRRLQVRRLHAALADEDVV 211
HPQALQHGRPPRRLQVRRLHAAL+ +V
Sbjct: 185 HPQALQHGRPPRRLQVRRLHAALSGPALV 271
>gb|BI958660.1|BI958660 HVSMEn0016B18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016B18f, mRNA sequence
Length = 632
Score = 187 bits (403), Expect = 4e-047
Identities = 75/97 (77%), Positives = 84/97 (86%)
Frame = -2 / +3
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S +ALRMAPCISAAD+P S P+SSCCSAVHTI +SPSCLCAVMLSGT
Sbjct: 135 LGEGAGECGRSSPGGMALRMAPCISAADEPDSAPSSSCCSAVHTIXKSPSCLCAVMLSGT 314
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
A+ AGIKPEVAITIPKR NMADRP+GY CGDYTL *+
Sbjct: 315 AKMAGIKPEVAITIPKRLNMADRPLGYNCGDYTLA*V 425
Score = 153 bits (329), Expect = 6e-037
Identities = 69/90 (76%), Positives = 73/90 (81%)
Frame = +1 / -2
Query: 238 V*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVG 417
V*SP L*P GRSAM +RLGMVMATSGLIPA LAVPDSMTAHRQLGL MVCTAEQQLL G
Sbjct: 412 V*SPQL*PRGRSAMFKRLGMVMATSGLIPAILAVPDSMTAHRQLGLLXMVCTAEQQLLEG 233
Query: 418 VDCGSSAAEMHGAILSATLSAEALPHSPXP 507
+ GSSAAEMHGA+ A + LPHSP P
Sbjct: 232 AESGSSAAEMHGAMRRAIPPGDDLPHSPAP 143
Score = 144 bits (309), Expect = 3e-034
Identities = 57/89 (64%), Positives = 59/89 (66%)
Frame = +2 / -3
Query: 230 RAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSC 409
+ CNLR CSR GRPC SAWGW*WR A*SR WRCRTA*RRTGSWGS WCA SSSC
Sbjct: 420 KPGCNLRNCSRGAGRPCSSAWGW*WRLRA*SRPSWRCRTA*RRTGSWGSCXWCAPPSSSC 241
Query: 410 WSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
W A + R PRC P P R SRT
Sbjct: 240 WRAPSPARPPPRCTGPCAGPSPRGTTSRT 154
Score = 131 bits (280), Expect = 3e-030
Identities = 60/104 (57%), Positives = 68/104 (65%)
Frame = -1 / +2
Query: 522 RRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAV 343
R G VRE + R G G +HLG R + A QQLLL AHH EPQLPVRRHAV
Sbjct: 128 RGAGRGGRRVREVVPRGDGPAHGPVHLGGGRAGLGALQQLLLGGAHHXQEPQLPVRRHAV 307
Query: 342 RHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
RHRQ RDQA RH+HPQAL+HGRP RLQ+RRLH L+ +V
Sbjct: 308 RHRQDGRDQARSRHHHPQALEHGRPAPRLQLRRLHPGLSGPTLV 439
>gb|BI960467.1|BI960467 HVSMEn0024L06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024L06f, mRNA sequence
Length = 635
Score = 177 bits (380), Expect = 6e-044
Identities = 71/99 (71%), Positives = 79/99 (79%)
Frame = -2 / +2
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S +R + MAPCISAAD+P S P+ SCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 134 LGEGAGECGRSSPERRGVXMAPCISAADEPDSAPSXSCCSAVHTIGKSPSCLCAVMLSGT 313
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*LMK 219
A AGIKPEVAI IPKR NM DRP GYKCG Y L *L +
Sbjct: 314 ANMAGIKPEVAIAIPKRWNMGDRPFGYKCGYYALA*LAR 430
Score = 153 bits (329), Expect = 6e-037
Identities = 67/91 (73%), Positives = 71/91 (78%)
Frame = +1 / -3
Query: 235 SV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLV 414
S * PHL P GRS M QRLGM MATSGLIPA LAVPDSMTAHRQLGL PMVCTAEQQL
Sbjct: 414 SA*YPHLYPKGRSPMFQRLGMAMATSGLIPAMLAVPDSMTAHRQLGLLPMVCTAEQQLXE 235
Query: 415 GVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
G + GSSAAEMHGA+ + S + LPHSP P
Sbjct: 234 GAESGSSAAEMHGAMXTPLRSGDDLPHSPAP 142
Score = 151 bits (325), Expect = 2e-036
Identities = 60/95 (63%), Positives = 65/95 (68%)
Frame = +2 / -1
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCA 391
TT+ + A N+RTC+RRGGRPC SAWGW WRP A*SR WRCRTA*RRTGSWGS RWCA
Sbjct: 437 TTAGPVKPARNIRTCTRRGGRPCSSAWGWRWRPRA*SRPCWRCRTA*RRTGSWGSCRWCA 258
Query: 392 QRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SSS W A + R PRC P P R SRT
Sbjct: 257 PPSSSXWRAPSPARPPPRCTGPXAPPSARGTTSRT 153
Score = 131 bits (280), Expect = 3e-030
Identities = 62/104 (59%), Positives = 67/104 (64%)
Frame = -1 / +1
Query: 522 RRCGAWXGGVRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAV 343
R G VRE + R G G +HLG R + A QLLL AHHR EPQLPVRRHAV
Sbjct: 127 RGAGRGGRRVREVVPRAEGGAHGPVHLGGGRAGLGALXQLLLGGAHHRQEPQLPVRRHAV 306
Query: 342 RHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
RHRQ RDQA GRH HPQAL+HGRPP R+QVR L A L VV
Sbjct: 307 RHRQHGRDQARGRHRHPQALEHGRPPLRVQVRILRAGLTGPAVV 438
>gb|BQ766908.1|BQ766908 EBro08_SQ007_O12_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_O12 5', mRNA sequence
Length = 573
Score = 106 bits (226), Expect(2) = 4e-042
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = -2 / +3
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*LMKTSSTR 204
QSP CLCAVMLS TA++AGIKPEVA++IPKRC++ DRPVGYKCG YTLP* ++ R
Sbjct: 261 QSPKCLCAVMLSDTAKSAGIKPEVAMSIPKRCDLVDRPVGYKCGAYTLP*ALRPLDAR 434
Score = 90.4 bits (191), Expect(2) = 1e-023
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = -1 / +2
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADE 220
H AEPQ+P+RRHA+RHRQ R QAG RH HPQAL+ RPP RLQVR +H+A++ E
Sbjct: 251 HREAEPQVPLRRHALRHRQERRHQAGSRHVHPQALRPRRPPCRLQVRSIHSAVSLE 418
Score = 90.0 bits (190), Expect(2) = 1e-031
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +2 / -1
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
+S A C LRTCSR+GGR SAWGW WR PA* R+ WRCR A*RR G+WGSA
Sbjct: 420 ASRLTAECMLRTCSRQGGRRGRSAWGWTWRLPA*CRRSWRCRRA*RRRGTWGSA 259
Score = 84.5 bits (178), Expect(2) = 4e-042
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = -2 / +3
Query: 512 AHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
AHG GECG+ AD++AL++APC SA DP+S P+S CC+AVHTIG+
Sbjct: 123 AHGAGECGKTPADKMALKLAPCASAGQDPKSAPSSGCCTAVHTIGK 260
Score = 80.8 bits (170), Expect(2) = 1e-022
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = +1 / -3
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
G V +PHL*PTGRS QRLGM MATSGL+PA LAV +SMTA R LGLC
Sbjct: 406 GRVYAPHL*PTGRSTRSQRLGMDMATSGLMPALLAVSESMTAQRHLGLC 260
Score = 65.7 bits (137), Expect(2) = 1e-031
Identities = 28/45 (62%), Positives = 29/45 (64%)
Frame = +1 / -3
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCA 513
PMVCTA Q L G D GS A+ HGA SA LSA PHSP PCA
Sbjct: 256 PMVCTAVQHPLDGADLGSCPADAHGANFSAILSAGVFPHSPAPCA 122
Score = 44.6 bits (91), Expect(2) = 1e-022
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +2 / -1
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
RR ++RWCA S+ W+A T G P AP+ AP C R SRT
Sbjct: 282 RRGTWGSASRWCAPPCSTRWTAPTWGPAPPTRTAPTSAPSCPRASSRT 139
Score = 38.2 bits (77), Expect(2) = 1e-023
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1 / +2
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHR 379
VRE R Q GA+ GA+ +G P V A Q++L AHHR
Sbjct: 140 VREDARGQDGAEVGAVRVGGAGPQVGAVQRVLHGGAHHR 256
>gb|BQ766335.1|BQ766335 EBro08_SQ005_N13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ005_N13 5', mRNA sequence
Length = 526
Score = 106 bits (226), Expect(2) = 4e-042
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = -2 / +1
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*LMKTSSTR 204
QSP CLCAVMLS TA++AGIKPEVA++IPKRC++ DRPVGYKCG YTLP* ++ R
Sbjct: 274 QSPKCLCAVMLSDTAKSAGIKPEVAMSIPKRCDLVDRPVGYKCGAYTLP*ALRPLDAR 447
Score = 90.4 bits (191), Expect(2) = 1e-023
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = -1 / +3
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADE 220
H AEPQ+P+RRHA+RHRQ R QAG RH HPQAL+ RPP RLQVR +H+A++ E
Sbjct: 264 HREAEPQVPLRRHALRHRQERRHQAGSRHVHPQALRPRRPPCRLQVRSIHSAVSLE 431
Score = 90.0 bits (190), Expect(2) = 1e-031
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +2 / -1
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
+S A C LRTCSR+GGR SAWGW WR PA* R+ WRCR A*RR G+WGSA
Sbjct: 433 ASRLTAECMLRTCSRQGGRRGRSAWGWTWRLPA*CRRSWRCRRA*RRRGTWGSA 272
Score = 84.5 bits (178), Expect(2) = 4e-042
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = -2 / +1
Query: 512 AHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
AHG GECG+ AD++AL++APC SA DP+S P+S CC+AVHTIG+
Sbjct: 136 AHGAGECGKTPADKMALKLAPCASAGQDPKSAPSSGCCTAVHTIGK 273
Score = 80.8 bits (170), Expect(2) = 1e-022
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = +1 / -3
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
G V +PHL*PTGRS QRLGM MATSGL+PA LAV +SMTA R LGLC
Sbjct: 419 GRVYAPHL*PTGRSTRSQRLGMDMATSGLMPALLAVSESMTAQRHLGLC 273
Score = 65.7 bits (137), Expect(2) = 1e-031
Identities = 28/45 (62%), Positives = 29/45 (64%)
Frame = +1 / -3
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCA 513
PMVCTA Q L G D GS A+ HGA SA LSA PHSP PCA
Sbjct: 269 PMVCTAVQHPLDGADLGSCPADAHGANFSAILSAGVFPHSPAPCA 135
Score = 44.6 bits (91), Expect(2) = 1e-022
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +2 / -1
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
RR ++RWCA S+ W+A T G P AP+ AP C R SRT
Sbjct: 295 RRGTWGSASRWCAPPCSTRWTAPTWGPAPPTRTAPTSAPSCPRASSRT 152
Score = 38.2 bits (77), Expect(2) = 1e-023
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1 / +3
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHR 379
VRE R Q GA+ GA+ +G P V A Q++L AHHR
Sbjct: 153 VREDARGQDGAEVGAVRVGGAGPQVGAVQRVLHGGAHHR 269
>gb|BF260771.3|BF260771 HVSMEf0022O11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022O11f, mRNA sequence
Length = 541
Score = 170 bits (366), Expect = 5e-042
Identities = 68/86 (79%), Positives = 75/86 (87%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G G CGR+S DR+ALRMAPCI AAD+P S P+SSCCSAVHTIG+SPSCLCAVMLSGT
Sbjct: 130 LGEGAG*CGRSSPDRMALRMAPCIWAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGT 309
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVG 258
+ AGIKPEVAITIP RCNMADRPVG
Sbjct: 310 GKMAGIKPEVAITIPMRCNMADRPVG 387
Score = 149 bits (319), Expect = 1e-035
Identities = 64/83 (77%), Positives = 69/83 (83%)
Frame = +1 / -3
Query: 259 PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVGVDCGSSA 438
PTGRSAMLQR+GMVMATSGLIPA L VPDSMTAHRQLGL PMVCTAEQQLL G + GSSA
Sbjct: 386 PTGRSAMLQRMGMVMATSGLIPAILPVPDSMTAHRQLGLLPMVCTAEQQLLEGAESGSSA 207
Query: 439 AEMHGAILSATLSAEALPHSPXP 507
A+MHGA+ A S + LPH P P
Sbjct: 206 AQMHGAMRRAIRSGDDLPH*PAP 138
Score = 138 bits (297), Expect = 2e-032
Identities = 55/80 (68%), Positives = 57/80 (71%)
Frame = +2 / -1
Query: 257 SRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSCWSAWTAGRR 436
SR+GGRPCCSAWGW*WRP A*SR RCRTA*RRTGSWGS RWCA SSSCW A + R
Sbjct: 388 SRQGGRPCCSAWGW*WRPRA*SRPSCRCRTA*RRTGSWGSCRWCAPPSSSCWRAPSPARP 209
Query: 437 QPRCMAPSLAPPCRRRLSRT 496
PRC P P R SRT
Sbjct: 208 PPRCTGPCAGPSGRGTTSRT 149
Score = 123 bits (263), Expect = 8e-028
Identities = 54/80 (67%), Positives = 58/80 (72%)
Frame = -1 / +3
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQ 316
VRE + R G G +HLG R + A QQLLL AHHR EPQLPVRRHAVRHRQ RDQ
Sbjct: 150 VREVVPRPDGPAHGPVHLGGGRAGLGALQQLLLGGAHHRQEPQLPVRRHAVRHRQDGRDQ 329
Query: 315 AGGRHYHPQALQHGRPPRRL 256
A GRH+HP ALQHGRPP RL
Sbjct: 330 ARGRHHHPHALQHGRPPCRL 389
>gb|BF263225.2|BF263225 HV_CEa0006C22f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006C22f, mRNA sequence
Length = 593
Score = 104 bits (222), Expect(2) = 1e-041
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = -2 / +2
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*LM 222
QSP CLCAVMLS TA++AGIKPEVA++IPKRC++ DRPVGYKCG YTLP* +
Sbjct: 263 QSPKCLCAVMLSDTAKSAGIKPEVAMSIPKRCDLVDRPVGYKCGAYTLP*AL 418
Score = 90.4 bits (191), Expect(2) = 1e-023
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = -1 / +1
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADE 220
H AEPQ+P+RRHA+RHRQ R QAG RH HPQAL+ RPP RLQVR +H+A++ E
Sbjct: 253 HREAEPQVPLRRHALRHRQERRHQAGSRHVHPQALRPRRPPCRLQVRSIHSAVSLE 420
Score = 90.4 bits (191), Expect(2) = 1e-031
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = +2 / -1
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
++ S A C LRTCSR+GGR SAWGW WR PA* R+ WRCR A*RR G+WGSA
Sbjct: 428 SSGSRLTAECMLRTCSRQGGRRGRSAWGWTWRLPA*CRRSWRCRRA*RRRGTWGSA 261
Score = 84.5 bits (178), Expect(2) = 1e-041
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = -2 / +2
Query: 512 AHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
AHG GECG+ AD++AL++APC SA DP+S P+S CC+AVHTIG+
Sbjct: 125 AHGAGECGKTPADKMALKLAPCASAGQDPKSAPSSGCCTAVHTIGK 262
Score = 80.8 bits (170), Expect(2) = 1e-022
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = +1 / -3
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
G V +PHL*PTGRS QRLGM MATSGL+PA LAV +SMTA R LGLC
Sbjct: 408 GRVYAPHL*PTGRSTRSQRLGMDMATSGLMPALLAVSESMTAQRHLGLC 262
Score = 65.7 bits (137), Expect(2) = 1e-031
Identities = 28/45 (62%), Positives = 29/45 (64%)
Frame = +1 / -3
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCA 513
PMVCTA Q L G D GS A+ HGA SA LSA PHSP PCA
Sbjct: 258 PMVCTAVQHPLDGADLGSCPADAHGANFSAILSAGVFPHSPAPCA 124
Score = 44.6 bits (91), Expect(2) = 1e-022
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +2 / -1
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
RR ++RWCA S+ W+A T G P AP+ AP C R SRT
Sbjct: 284 RRGTWGSASRWCAPPCSTRWTAPTWGPAPPTRTAPTSAPSCPRASSRT 141
Score = 38.2 bits (77), Expect(2) = 1e-023
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1 / +1
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHR 379
VRE R Q GA+ GA+ +G P V A Q++L AHHR
Sbjct: 142 VREDARGQDGAEVGAVRVGGAGPQVGAVQRVLHGGAHHR 258
>gb|BM372222.2|BM372222 EBro03_SQ004_F20_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_F20 5', mRNA sequence
Length = 430
Score = 104 bits (221), Expect(2) = 2e-041
Identities = 40/50 (80%), Positives = 46/50 (92%)
Frame = -2 / +3
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP* 228
QSP CLCAVMLS TA++AGIKPEVA++IPKRC++ DRPVGYKCG YTLP*
Sbjct: 279 QSPKCLCAVMLSDTAKSAGIKPEVAMSIPKRCDLVDRPVGYKCGAYTLP* 428
Score = 90.0 bits (190), Expect(2) = 1e-023
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = -1 / +2
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALA 226
H AEPQ+P+RRHA+RHRQ R QAG RH HPQAL+ RPP RLQVR +H+A++
Sbjct: 269 HREAEPQVPLRRHALRHRQERRHQAGSRHVHPQALRPRRPPCRLQVRSIHSAVS 430
Score = 89.0 bits (188), Expect(3) = 7e-032
Identities = 35/49 (71%), Positives = 38/49 (77%)
Frame = +2 / -2
Query: 233 AACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
A C LRTCSR+GGR SAWGW WR PA* R+ WRCR A*RR G+WGSA
Sbjct: 423 AECMLRTCSRQGGRRGRSAWGWTWRLPA*CRRSWRCRRA*RRRGTWGSA 277
Score = 84.5 bits (178), Expect(2) = 2e-041
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = -2 / +3
Query: 512 AHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
AHG GECG+ AD++AL++APC SA DP+S P+S CC+AVHTIG+
Sbjct: 141 AHGAGECGKTPADKMALKLAPCASAGQDPKSAPSSGCCTAVHTIGK 278
Score = 80.8 bits (170), Expect(2) = 3e-022
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
G V +PHL*PTGRS QRLGM MATSGL+PA LAV +SMTA R LGLC
Sbjct: 424 GRVYAPHL*PTGRSTRSQRLGMDMATSGLMPALLAVSESMTAQRHLGLC 278
Score = 65.7 bits (137), Expect(3) = 7e-032
Identities = 28/45 (62%), Positives = 29/45 (64%)
Frame = +1 / -1
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCA 513
PMVCTA Q L G D GS A+ HGA SA LSA PHSP PCA
Sbjct: 274 PMVCTAVQHPLDGADLGSCPADAHGANFSAILSAGVFPHSPAPCA 140
Score = 43.2 bits (88), Expect(2) = 3e-022
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +2 / -2
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
RR ++RWCA S+ W+A T G P AP+ AP C R SRT
Sbjct: 300 RRGTWGSASRWCAPPCSTRWTAPTWGPAPPTRTAPTSAPFCPRASSRT 157
Score = 38.6 bits (78), Expect(2) = 1e-023
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1 / +2
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHR 379
VRE R Q GA+ GA+ +G P V A Q++L AHHR
Sbjct: 158 VREDARGQNGAEVGAVRVGGAGPQVGAVQRVLHGGAHHR 274
Score = 18.9 bits (35), Expect(3) = 7e-032
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3 / -3
Query: 375 LPDGVH 392
LPDGVH
Sbjct: 278 LPDGVH 261
>gb|BI778783.2|BI778783 EBro01_SQ001_H14_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ001_H14 5', mRNA sequence
Length = 530
Score = 107 bits (229), Expect(2) = 2e-041
Identities = 41/55 (74%), Positives = 49/55 (89%)
Frame = -2 / +2
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*LMKTS 213
QSP CLCAVMLS TA++AGIKPEVA++IPKRCN+ DRPVGYKCG YTLP*+ + +
Sbjct: 284 QSPKCLCAVMLSDTAKSAGIKPEVAMSIPKRCNLVDRPVGYKCGAYTLP*VFEAT 448
Score = 100 bits (212), Expect(2) = 1e-034
Identities = 37/49 (75%), Positives = 40/49 (81%)
Frame = +2 / -1
Query: 233 AACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
A C LRTCSR+GGR CSAWGW WRPPA* R+ WRCR A*RR G+WGSA
Sbjct: 428 AECRLRTCSRQGGRRGCSAWGWTWRPPA*CRRSWRCRRA*RRRGTWGSA 282
Score = 95.5 bits (202), Expect(2) = 3e-025
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = -1 / +1
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALA 226
H AEPQ+P+RRHA+RHRQ R QAGGRH HPQALQ RPP RLQVR LH+A++
Sbjct: 274 HREAEPQVPLRRHALRHRQERRHQAGGRHVHPQALQPRRPPCRLQVRSLHSAVS 435
Score = 85.8 bits (181), Expect(2) = 4e-024
Identities = 38/49 (77%), Positives = 41/49 (83%)
Frame = +1 / -3
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
G V*+PHL*PTGRS LQRLGM MATSGL+PA LAV +SMTA R LGLC
Sbjct: 429 GRV*APHL*PTGRSTRLQRLGMDMATSGLMPALLAVSESMTAQRHLGLC 283
Score = 80.8 bits (170), Expect(2) = 2e-041
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = -2 / +2
Query: 512 AHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
A G GECG+ AD++AL++APC SA DP+S P+S CC+AVHTIG+
Sbjct: 146 AQGAGECGKTPADKMALKLAPCASAGQDPKSAPSSGCCTAVHTIGK 283
Score = 66.1 bits (138), Expect(2) = 1e-034
Identities = 28/45 (62%), Positives = 29/45 (64%)
Frame = +1 / -3
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCA 513
PMVCTA Q L G D GS A+ HGA SA LSA PHSP PCA
Sbjct: 279 PMVCTAVQHPLDGADLGSCPADAHGASFSAILSAGVFPHSPAPCA 145
Score = 44.6 bits (91), Expect(2) = 4e-024
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +2 / -1
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
RR ++RWCA S+ W+A T G P AP+ AP C R SRT
Sbjct: 305 RRGTWGSASRWCAPPCSTRWTAPTWGPAPPTRTAPASAPSCPRASSRT 162
Score = 38.6 bits (78), Expect(2) = 3e-025
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1 / +1
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHR 379
VRE R Q GA+ GA+ +G P V A Q++L AHHR
Sbjct: 163 VREDARGQDGAEAGAVRVGGAGPQVGAVQRVLHGGAHHR 279
>gb|BI777432.2|BI777432 EBro04_SQ001_D11_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_D11 5', mRNA sequence
Length = 481
Score = 107 bits (229), Expect(2) = 2e-041
Identities = 41/55 (74%), Positives = 49/55 (89%)
Frame = -2 / +3
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*LMKTS 213
QSP CLCAVMLS TA++AGIKPEVA++IPKRCN+ DRPVGYKCG YTLP*+ + +
Sbjct: 231 QSPKCLCAVMLSDTAKSAGIKPEVAMSIPKRCNLVDRPVGYKCGAYTLP*VFEAT 395
Score = 100 bits (212), Expect(2) = 1e-034
Identities = 37/49 (75%), Positives = 40/49 (81%)
Frame = +2 / -2
Query: 233 AACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
A C LRTCSR+GGR CSAWGW WRPPA* R+ WRCR A*RR G+WGSA
Sbjct: 375 AECRLRTCSRQGGRRGCSAWGWTWRPPA*CRRSWRCRRA*RRRGTWGSA 229
Score = 95.5 bits (202), Expect(2) = 3e-025
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = -1 / +2
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALA 226
H AEPQ+P+RRHA+RHRQ R QAGGRH HPQALQ RPP RLQVR LH+A++
Sbjct: 221 HREAEPQVPLRRHALRHRQERRHQAGGRHVHPQALQPRRPPCRLQVRSLHSAVS 382
Score = 85.8 bits (181), Expect(2) = 4e-024
Identities = 38/49 (77%), Positives = 41/49 (83%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
G V*+PHL*PTGRS LQRLGM MATSGL+PA LAV +SMTA R LGLC
Sbjct: 376 GRV*APHL*PTGRSTRLQRLGMDMATSGLMPALLAVSESMTAQRHLGLC 230
Score = 80.8 bits (170), Expect(2) = 2e-041
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = -2 / +3
Query: 512 AHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
A G GECG+ AD++AL++APC SA DP+S P+S CC+AVHTIG+
Sbjct: 93 AQGAGECGKTPADKMALKLAPCASAGQDPKSAPSSGCCTAVHTIGK 230
Score = 66.1 bits (138), Expect(2) = 1e-034
Identities = 28/45 (62%), Positives = 29/45 (64%)
Frame = +1 / -1
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCA 513
PMVCTA Q L G D GS A+ HGA SA LSA PHSP PCA
Sbjct: 226 PMVCTAVQHPLDGADLGSCPADAHGASFSAILSAGVFPHSPAPCA 92
Score = 44.6 bits (91), Expect(2) = 4e-024
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +2 / -2
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
RR ++RWCA S+ W+A T G P AP+ AP C R SRT
Sbjct: 252 RRGTWGSASRWCAPPCSTRWTAPTWGPAPPTRTAPASAPSCPRASSRT 109
Score = 38.6 bits (78), Expect(2) = 3e-025
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1 / +2
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHR 379
VRE R Q GA+ GA+ +G P V A Q++L AHHR
Sbjct: 110 VREDARGQDGAEAGAVRVGGAGPQVGAVQRVLHGGAHHR 226
>gb|BQ766568.1|BQ766568 EBro08_SQ006_P09 _R root, 3 week, drought-stressed, cv Optic,
EBro08 Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ006_P09 5', mRNA sequence
Length = 424
Score = 107 bits (229), Expect(2) = 3e-041
Identities = 41/55 (74%), Positives = 49/55 (89%)
Frame = -2 / +3
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*LMKTS 213
QSP CLCAVMLS TA++AGIKPEVA++IPKRCN+ DRPVGYKCG YTLP*+ + +
Sbjct: 228 QSPKCLCAVMLSDTAKSAGIKPEVAMSIPKRCNLVDRPVGYKCGAYTLP*VFEAT 392
Score = 100 bits (212), Expect(3) = 4e-035
Identities = 37/49 (75%), Positives = 40/49 (81%)
Frame = +2 / -2
Query: 233 AACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
A C LRTCSR+GGR CSAWGW WRPPA* R+ WRCR A*RR G+WGSA
Sbjct: 372 AECRLRTCSRQGGRRGCSAWGWTWRPPA*CRRSWRCRRA*RRRGTWGSA 226
Score = 95.5 bits (202), Expect(2) = 1e-025
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = -1 / +2
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALA 226
H AEPQ+P+RRHA+RHRQ R QAGGRH HPQALQ RPP RLQVR LH+A++
Sbjct: 218 HREAEPQVPLRRHALRHRQERRHQAGGRHVHPQALQPRRPPCRLQVRSLHSAVS 379
Score = 85.8 bits (181), Expect(2) = 4e-024
Identities = 38/49 (77%), Positives = 41/49 (83%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
G V*+PHL*PTGRS LQRLGM MATSGL+PA LAV +SMTA R LGLC
Sbjct: 373 GRV*APHL*PTGRSTRLQRLGMDMATSGLMPALLAVSESMTAQRHLGLC 227
Score = 79.9 bits (168), Expect(2) = 3e-041
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -2 / +3
Query: 512 AHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
A G GECG+ AD++AL +APC SA DP+S P+S CC+AVHTIG+
Sbjct: 90 AQGAGECGKTPADKMALNLAPCASAGQDPKSAPSSGCCTAVHTIGK 227
Score = 65.7 bits (137), Expect(3) = 4e-035
Identities = 28/45 (62%), Positives = 29/45 (64%)
Frame = +1 / -1
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCA 513
PMVCTA Q L G D GS A+ HGA SA LSA PHSP PCA
Sbjct: 223 PMVCTAVQHPLDGADLGSCPADAHGARFSAILSAGVFPHSPAPCA 89
Score = 44.1 bits (90), Expect(2) = 4e-024
Identities = 21/48 (43%), Positives = 25/48 (52%)
Frame = +2 / -2
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
RR ++RWCA S+ W+A T G P AP AP C R SRT
Sbjct: 249 RRGTWGSASRWCAPPCSTRWTAPTWGPAPPTRTAPDSAPSCPRASSRT 106
Score = 39.6 bits (80), Expect(2) = 1e-025
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1 / +2
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHR 379
VRE R Q GA+ GA+ +G P V A Q++L AHHR
Sbjct: 107 VREDARGQDGAESGAVRVGGAGPQVGAVQRVLHGGAHHR 223
Score = 18.9 bits (35), Expect(3) = 4e-035
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3 / -3
Query: 375 LPDGVH 392
LPDGVH
Sbjct: 227 LPDGVH 210
>gb|BF258553.2|BF258553 HVSMEf0016A19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0016A19f, mRNA sequence
Length = 593
Score = 103 bits (219), Expect(2) = 4e-041
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = -2 / +1
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*LMKTSSTR 204
Q+P CLCAVMLS TA++AGIKPEVA+++PKRC++ DRPVG+KCG YTLP* +K R
Sbjct: 271 QNPKCLCAVMLSDTAKSAGIKPEVAMSLPKRCDLRDRPVGFKCGAYTLP*ALKPLDAR 444
Score = 86.8 bits (183), Expect(2) = 2e-023
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = -1 / +3
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADE 220
H AEPQ+P+RRHA+RHRQ R QAG RH PQAL+ RPP RLQVR +H+A++ E
Sbjct: 261 HREAEPQVPLRRHALRHRQERRHQAGSRHVPPQALRPSRPPCRLQVRSIHSAVSLE 428
Score = 84.5 bits (178), Expect(2) = 4e-041
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = -2 / +1
Query: 512 AHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
AHG GECG+ AD++AL++APC SA DP+S P+S CC+AVHTIG+
Sbjct: 133 AHGAGECGKTPADKMALKLAPCASAGQDPKSAPSSGCCTAVHTIGK 270
Score = 78.5 bits (165), Expect(2) = 3e-028
Identities = 34/54 (62%), Positives = 38/54 (70%)
Frame = +2 / -2
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
+S A C LRT SR+GGR SAWG WR PA* R+ WRCR A*RR G+WGSA
Sbjct: 430 ASRLTAECMLRT*SRQGGREGRSAWGGTWRLPA*CRRSWRCRRA*RRRGTWGSA 269
Score = 65.7 bits (137), Expect(2) = 3e-028
Identities = 28/45 (62%), Positives = 29/45 (64%)
Frame = +1 / -1
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXPCA 513
PMVCTA Q L G D GS A+ HGA SA LSA PHSP PCA
Sbjct: 266 PMVCTAVQHPLDGADLGSCPADAHGANFSAILSAGVFPHSPAPCA 132
Score = 41.4 bits (84), Expect(2) = 2e-023
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = -1 / +3
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHR 379
VRE R Q GA+ GA+ +G RP V A Q++L AHHR
Sbjct: 150 VREDARGQDGAEVGAVRVGGARPQVGAVQRVLHGGAHHR 266
>gb|BF065110.2|BF065110 HV_CEb0023A22f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023A22f, mRNA sequence
Length = 565
Score = 160 bits (345), Expect = 4e-039
Identities = 61/97 (62%), Positives = 75/97 (77%)
Frame = -2 / +3
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSG 339
G A G GECGR ADR+AL++APC +A +P+S CC+ + +IG+SP CLCAVMLS
Sbjct: 117 GAASGAGECGRVPADRMALKLAPCAAATQNPRSKVAPGCCAQIRSIGRSPKCLCAVMLSS 296
Query: 338 TARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP* 228
TAR AG+ P VA+TIPKRC +A+RPVGYKCG YTLP*
Sbjct: 297 TARQAGVNPAVAMTIPKRCAIANRPVGYKCGPYTLP* 407
Score = 116 bits (249), Expect = 7e-026
Identities = 58/97 (59%), Positives = 62/97 (63%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
G V PHL*PTGR AM QRLGMVMAT+GL PA AV DSMTA R LGL PM+ QQ
Sbjct: 403 GRVYGPHL*PTGRLAMAQRLGMVMATAGLTPAWRAVLDSMTAQRHLGLRPMLRICAQQPG 224
Query: 412 VGVDCGSSAAEMHGAILSATLSAEALPHSPXPCATPA 522
+D G A HGA SA LSA PHSP P A P+
Sbjct: 223 ATLDRGFWVAAAHGASFSAILSAGTRPHSPAPLAAPS 113
>gb|BJ465566.1|BJ465566 BJ465566 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags24d01 3', mRNA sequence
Length = 472
Score = 106 bits (226), Expect(2) = 8e-039
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = -2 / -3
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*LMKTSSTR 204
QSP CLCAVMLS TA++AGIKPEVA++IPKRC++ DRPVGYKCG YTLP* ++ R
Sbjct: 347 QSPKCLCAVMLSDTAKSAGIKPEVAMSIPKRCDLVDRPVGYKCGAYTLP*ALRPLDAR 174
Score = 90.4 bits (191), Expect(2) = 1e-023
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = -1 / -2
Query: 387 HHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADE 220
H AEPQ+P+RRHA+RHRQ R QAG RH HPQAL+ RPP RLQVR +H+A++ E
Sbjct: 357 HREAEPQVPLRRHALRHRQERRHQAGSRHVHPQALRPRRPPCRLQVRSIHSAVSLE 190
Score = 90.0 bits (190), Expect(2) = 7e-028
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +2 / +2
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
+S A C LRTCSR+GGR SAWGW WR PA* R+ WRCR A*RR G+WGSA
Sbjct: 188 ASRLTAECMLRTCSRQGGRRGRSAWGWTWRLPA*CRRSWRCRRA*RRRGTWGSA 349
Score = 80.8 bits (170), Expect(2) = 1e-022
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = +1 / +1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLC 378
G V +PHL*PTGRS QRLGM MATSGL+PA LAV +SMTA R LGLC
Sbjct: 202 GRVYAPHL*PTGRSTRSQRLGMDMATSGLMPALLAVSESMTAQRHLGLC 348
Score = 73.5 bits (154), Expect(2) = 8e-039
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = -2 / -3
Query: 497 ECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
ECG+ AD++AL++APC SA DP+S P+S CC+AVHTIG+
Sbjct: 470 ECGKTPADKMALKLAPCASAGQDPKSAPSSGCCTAVHTIGK 348
Score = 53.3 bits (110), Expect(2) = 7e-028
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +1 / +1
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHS 498
PMVCTA Q L G D GS A+ HGA SA LSA PHS
Sbjct: 352 PMVCTAVQHPLDGADLGSCPADAHGANFSAILSAGVFPHS 471
Score = 44.6 bits (91), Expect(2) = 1e-022
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +2 / +2
Query: 353 RRTGSWGSARWCAQRSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
RR ++RWCA S+ W+A T G P AP+ AP C R SRT
Sbjct: 326 RRGTWGSASRWCAPPCSTRWTAPTWGPAPPTRTAPTSAPSCPRASSRT 469
Score = 38.2 bits (77), Expect(2) = 1e-023
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1 / -2
Query: 495 VRESLRRQGGAKDGAMHLGCRRPAVHADQQLLLRCAHHR 379
VRE R Q GA+ GA+ +G P V A Q++L AHHR
Sbjct: 468 VREDARGQDGAEVGAVRVGGAGPQVGAVQRVLHGGAHHR 352
>gb|BI778861.2|BI778861 EBro01_SQ001_M16_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ001_M16 5', mRNA sequence
Length = 528
Score = 153 bits (328), Expect(2) = 3e-038
Identities = 62/80 (77%), Positives = 66/80 (82%)
Frame = -2 / +2
Query: 443 SAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRP 264
+A D+P S P+SSCCSAVHTIG SCLCAVMLSGTAR AGIKPEVAITIPKRCNMADRP
Sbjct: 185 AAVDEPDSAPSSSCCSAVHTIGFDNSCLCAVMLSGTARMAGIKPEVAITIPKRCNMADRP 364
Query: 263 VGYKCGDYTLP*LMKTSSTR 204
VGY CGDYTLP* S +
Sbjct: 365 VGYNCGDYTLP*WPSRSGVK 424
Score = 138 bits (296), Expect(2) = 2e-038
Identities = 53/71 (74%), Positives = 57/71 (80%)
Frame = +2 / -2
Query: 230 RAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSC 409
+AACNLR+CSRRGGRPCCSAWGW*WRP A*SR WRCRTA*RRTGS +RWCA SSSC
Sbjct: 398 KAACNLRSCSRRGGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSCCRSRWCAPPSSSC 219
Query: 410 WSAWTAGRRQP 442
W A + R P
Sbjct: 218 WRAPSPARPPP 186
Score = 130 bits (278), Expect = 7e-030
Identities = 60/70 (85%), Positives = 61/70 (87%)
Frame = +1 / -1
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLL 411
GSV*SP L*PTGRSAMLQRLGMVMATSGLIPA LAVPDSMTAHRQL PMVCTAEQQLL
Sbjct: 396 GSV*SPQL*PTGRSAMLQRLGMVMATSGLIPAILAVPDSMTAHRQLLSKPMVCTAEQQLL 217
Query: 412 VGVDCGSSAA 441
G + GSS A
Sbjct: 216 EGAESGSSTA 187
Score = 125 bits (268), Expect = 2e-028
Identities = 54/71 (76%), Positives = 57/71 (80%)
Frame = -1 / +1
Query: 441 GCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPR 262
G R + A QQLLL AHHR QLPVRRHAVRHRQ RDQA GRH+HPQALQHGRPPR
Sbjct: 187 GGGRAGLGALQQLLLGGAHHRLRQQLPVRRHAVRHRQDGRDQARGRHHHPQALQHGRPPR 366
Query: 261 RLQVRRLHAAL 229
RLQ+RRLHAAL
Sbjct: 367 RLQLRRLHAAL 399
Score = 40.0 bits (81), Expect(2) = 2e-038
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +1 / -1
Query: 430 SSAAEMHGAILSATLSAEALPHSPXP 507
S+AAEMHGA+ A S + LPHSP P
Sbjct: 195 STAAEMHGAMRRAIRSGDDLPHSPAP 118
Score = 24.9 bits (48), Expect(2) = 3e-038
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -3 / +3
Query: 514 WRMARGSAGEPPPTGWR*GW 455
W SAG P TGW W
Sbjct: 111 WGRGPASAGGRPRTGWPCAW 170
>gb|BI957407.1|BI957407 HVSMEn0009G07f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0009G07f, mRNA sequence
Length = 651
Score = 149 bits (320), Expect = 1e-035
Identities = 60/95 (63%), Positives = 69/95 (72%)
Frame = -2 / +2
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGT 336
+ G GECGR+S +R+ LRMAPCISAAD+P S P+ CCSAVHTIG SPSCLCA +LSGT
Sbjct: 137 LGEGAGECGRSSPERMGLRMAPCISAADEPDSAPSIICCSAVHTIGNSPSCLCAGVLSGT 316
Query: 335 ARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP 231
A IK +V TIP+RC M DRP GY D LP
Sbjct: 317 AYMGRIKRQVLFTIPERCTMGDRPAGYLFRDCPLP 421
Score = 116 bits (249), Expect = 7e-026
Identities = 52/83 (62%), Positives = 58/83 (69%)
Frame = +1 / -1
Query: 259 PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLVGVDCGSSA 438
P GRS M+QR GMV T LI AVPDS AHRQLGL PMVCTAEQQ++ G + GSSA
Sbjct: 393 PAGRSPMVQRSGMVKRTWRLIRPM*AVPDSTPAHRQLGLLPMVCTAEQQMMEGAESGSSA 214
Query: 439 AEMHGAILSATLSAEALPHSPXP 507
AEMHGA+ S + LPHSP P
Sbjct: 213 AEMHGAMRRPIRSGDDLPHSPAP 145
Score = 101 bits (216), Expect = 2e-021
Identities = 48/94 (51%), Positives = 50/94 (53%)
Frame = +2 / -2
Query: 215 TSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQ 394
T AA N T +RR G P CS GW* P A*S RCRTA RRTGSWG RWCA
Sbjct: 437 TGRPLEAAGNPGTSTRRAGHPWCSVRGW*RGPGA*SGPCRRCRTARRRTGSWGCCRWCAP 258
Query: 395 RSSSCWSAWTAGRRQPRCMAPSLAPPCRRRLSRT 496
SS W A + R PRC P P R SRT
Sbjct: 257 PSSR*WRAQSPARPPPRCTGPCAGPSARGTTSRT 156
>gb|BJ462736.1|BJ462736 BJ462736 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags24d01 5', mRNA sequence
Length = 493
Score = 106 bits (226), Expect(2) = 4e-035
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = -2 / +1
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*LMKTSSTR 204
QSP CLCAVMLS TA++AGIKPEVA++IPKRC++ DRPVGYKCG YTLP* ++ R
Sbjct: 127 QSPKCLCAVMLSDTAKSAGIKPEVAMSIPKRCDLVDRPVGYKCGAYTLP*ALRPLDAR 300
Score = 90.0 bits (190), Expect(2) = 3e-025
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +2 / -1
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
+S A C LRTCSR+GGR SAWGW WR PA* R+ WRCR A*RR G+WGSA
Sbjct: 286 ASRLTAECMLRTCSRQGGRRGRSAWGWTWRLPA*CRRSWRCRRA*RRRGTWGSA 125
Score = 61.1 bits (127), Expect(2) = 4e-035
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = -2 / +1
Query: 491 GRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
GR +AL++APC SA DP+S P+S CC+AVHTIG+
Sbjct: 10 GRRPRTXMALKLAPCASAGQDPKSAPSSGCCTAVHTIGK 126
Score = 44.6 bits (91), Expect(2) = 3e-025
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = +1 / -3
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALP 492
PMVCTA Q L G D GS A+ HGA SA L LP
Sbjct: 122 PMVCTAVQHPLDGADLGSCPADAHGANFSAXLVRGRLP 9
>gb|BQ761559.1|BQ761559 EBem10_SQ001_H05_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ001_H05 5', mRNA sequence
Length = 329
Score = 106 bits (226), Expect(2) = 9e-033
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = -2 / +2
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*LMKTSSTR 204
QSP CLCAVMLS TA++AGIKPEVA++IPKRC++ DRPVGYKCG YTLP* ++ R
Sbjct: 83 QSPKCLCAVMLSDTAKSAGIKPEVAMSIPKRCDLVDRPVGYKCGAYTLP*ALRPLDAR 256
Score = 90.0 bits (190), Expect(3) = 2e-024
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +2 / -1
Query: 218 SSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
+S A C LRTCSR+GGR SAWGW WR PA* R+ WRCR A*RR G+WGSA
Sbjct: 242 ASRLTAECMLRTCSRQGGRRGRSAWGWTWRLPA*CRRSWRCRRA*RRRGTWGSA 81
Score = 52.4 bits (108), Expect(2) = 9e-033
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -2 / +2
Query: 455 APCISAADDPQSTPTSSCCSAVHTIGQ 375
APC SA DP+S P+S CC+AVHTIG+
Sbjct: 2 APCASAGQDPKSAPSSGCCTAVHTIGK 82
Score = 38.2 bits (77), Expect(3) = 2e-024
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +1 / -3
Query: 379 PMVCTAEQQLLVGVDCGSSAAEMHGA 456
PMVCTA Q L G D GS A+ HGA
Sbjct: 78 PMVCTAVQHPLDGADLGSCPADAHGA 1
Score = 18.9 bits (35), Expect(3) = 2e-024
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3 / -2
Query: 375 LPDGVH 392
LPDGVH
Sbjct: 82 LPDGVH 65
>gb|BF260839.3|BF260839 HVSMEf0023B07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023B07f, mRNA sequence
Length = 862
Score = 78.0 bits (164), Expect(2) = 2e-031
Identities = 35/64 (54%), Positives = 41/64 (64%)
Frame = -1 / +1
Query: 369 QLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVVNETVRVN 190
QLPV R AVRHRQ DQ+ H HPQ LQHGRP RRLQVRRL A L+ +V +
Sbjct: 277 QLPVHRRAVRHRQDRLDQSLRLHLHPQELQHGRPHRRLQVRRLRAVLSGPALVPIKMSAM 456
Query: 189 QCMN 178
C++
Sbjct: 457 HCLH 468
Score = 77.1 bits (162), Expect(2) = 2e-031
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = -2 / +1
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQS 372
+ G EC R+ +DR+ALRMAPCISAAD+P S P+ CCS VHTIG S
Sbjct: 130 LGEGACECWRSFSDRMALRMAPCISAADEPDSVPSRMCCSEVHTIGWS 273
Score = 72.5 bits (152), Expect(2) = 4e-024
Identities = 32/52 (61%), Positives = 34/52 (65%)
Frame = +2 / -3
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGS 367
T + R A NLRTCSRR GRPCCS+WGW R *S RCRTA R TGS
Sbjct: 434 TRAGPLRTARNLRTCSRRCGRPCCSSWGWRCRRRL*SSLSCRCRTARRCTGS 279
Score = 57.9 bits (120), Expect(2) = 4e-024
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1 / -3
Query: 373 LCPMVCTAEQQLLVGVDCGSSAAEMHGAILSATLSAEALPHSPXP 507
L PMVCT+EQ +L G + GSSAA+MHGA+ A S L HS P
Sbjct: 272 LQPMVCTSEQHILDGTESGSSAADMHGAMRRAIRSENDLQHSQAP 138
>gb|BI960465.1|BI960465 HVSMEn0024L04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024L04f, mRNA sequence
Length = 639
Score = 128 bits (275), Expect = 2e-029
Identities = 55/94 (58%), Positives = 66/94 (70%)
Frame = -2 / +3
Query: 506 GXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSGTARA 327
G G + + MA CISA D+P S P+SSCCS VHTI +SPS LCAVMLSGTA
Sbjct: 144 GPASAGCLPPTGMGVPMARCISAGDEPDSAPSSSCCSGVHTIRESPSWLCAVMLSGTANM 323
Query: 326 AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
AGI+PEV+ TI +RCNMA+ P +KCG YTL *+
Sbjct: 324 AGIRPEVSFTIHERCNMANGPGRWKCGYYTLS*V 425
Score = 117 bits (251), Expect = 3e-026
Identities = 48/80 (60%), Positives = 53/80 (66%)
Frame = +2 / -1
Query: 230 RAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSARWCAQRSSSC 409
+ ACN+RT S +G PCC+A GW* RP A*SR WRCRTA RRT SWGS WCA SSSC
Sbjct: 420 KTACNIRTSSAQGRWPCCTARGW*RRPRA*SRPYWRCRTASRRTASWGSRGWCAPLSSSC 241
Query: 410 WSAWTAGRRQPRCMAPSLAP 469
W A + R PRC P P
Sbjct: 240 WRAPSLVRPPPRCTGPWARP 181
Score = 104 bits (221), Expect = 5e-022
Identities = 50/75 (66%), Positives = 53/75 (70%)
Frame = +1 / -3
Query: 235 SV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCPMVCTAEQQLLV 414
SV* PH G AML R MV TSGLIPA LAVPDS+TAH QLGL MVCT EQQLL
Sbjct: 415 SV*YPHFQRPGPLAMLHRSWMVKETSGLIPAILAVPDSITAHSQLGLSRMVCTPEQQLLE 236
Query: 415 GVDCGSSAAEMHGAI 459
G + GSS AEMH A+
Sbjct: 235 GAESGSSPAEMHRAM 191
Score = 104 bits (221), Expect = 5e-022
Identities = 49/86 (56%), Positives = 58/86 (67%)
Frame = -1 / +2
Query: 468 GAKDGAMHLGCRRPAVHADQQLLLRCAHHRAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQ 289
G G +HLG R + A QQLLLR AHH EPQL VRR AVRHRQ RDQA G +HP+
Sbjct: 182 GRAHGPVHLGGGRTRLGALQQLLLRGAHHPREPQLAVRRDAVRHRQYGRDQARGLLHHPR 361
Query: 288 ALQHGRPPRRLQVRRLHAALADEDVV 211
A+QHG+ P L+VR LHA L+ +V
Sbjct: 362 AVQHGQRPWALEVRILHAVLSGPTLV 439
>gb|BQ767572.1|BQ767572 EBro08_SQ009_D08_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_D08 5', mRNA sequence
Length = 372
Score = 125 bits (268), Expect = 2e-028
Identities = 47/57 (82%), Positives = 49/57 (85%)
Frame = +2 / -1
Query: 212 TTSSSARAACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSAR 382
T + +AACNLRTCSRRGGRPCCSAWGW*WRP A*SR WRCRTA*RRTGSWGS R
Sbjct: 171 TRAGPLKAACNLRTCSRRGGRPCCSAWGW*WRPRA*SRPSWRCRTA*RRTGSWGSCR 1
Score = 122 bits (260), Expect = 2e-027
Identities = 48/52 (92%), Positives = 51/52 (98%)
Frame = -2 / +3
Query: 380 GQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*L 225
G+SPSCLCAVMLSGTA+ AGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*+
Sbjct: 3 GKSPSCLCAVMLSGTAKMAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*V 158
Score = 115 bits (245), Expect = 2e-025
Identities = 47/57 (82%), Positives = 50/57 (87%)
Frame = -1 / +2
Query: 381 RAEPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAALADEDVV 211
R EPQLPVRRHAVRHRQ RDQA GRH+HPQALQHGRPPRRLQVRRLHAAL+ +V
Sbjct: 2 RQEPQLPVRRHAVRHRQDGRDQARGRHHHPQALQHGRPPRRLQVRRLHAALSGPALV 172
Score = 108 bits (231), Expect = 2e-023
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = +1 / -3
Query: 232 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAALAVPDSMTAHRQLGLCP 381
GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPA LAVPDSMTAHRQLGL P
Sbjct: 151 GSV*SPHL*PTGRSAMLQRLGMVMATSGLIPAILAVPDSMTAHRQLGLLP 2
>gb|BM443669.2|BM443669 EBem09_SQ001_B17_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ001_B17 5', mRNA sequence
Length = 403
Score = 105 bits (223), Expect(2) = 4e-026
Identities = 40/55 (72%), Positives = 48/55 (87%)
Frame = -2 / +1
Query: 377 QSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP*LMKTS 213
QSP CLCAVMLS A++AGIKPEVA++IPKRCN+ DRPVGYKCG YTLP*+ + +
Sbjct: 46 QSPKCLCAVMLSDIAKSAGIKPEVAMSIPKRCNLVDRPVGYKCGAYTLP*VFEAT 210
Score = 100 bits (212), Expect(2) = 2e-022
Identities = 37/49 (75%), Positives = 40/49 (81%)
Frame = +2 / -1
Query: 233 AACNLRTCSRRGGRPCCSAWGW*WRPPA*SRQPWRCRTA*RRTGSWGSA 379
A C LRTCSR+GGR CSAWGW WRPPA* R+ WRCR A*RR G+WGSA
Sbjct: 190 AECRLRTCSRQGGRRGCSAWGWTWRPPA*CRRSWRCRRA*RRRGTWGSA 44
Score = 31.8 bits (63), Expect(2) = 4e-026
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -2 / +1
Query: 416 PTSSCCSAVHTIGQ 375
P+S CC+AVHTIG+
Sbjct: 4 PSSGCCTAVHTIGK 45
Score = 24.0 bits (46), Expect(2) = 2e-022
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2 / -1
Query: 353 RRTGSWGSARWCAQRSSSCWSA 418
RR ++RWCA S+ W+A
Sbjct: 67 RRGTWGSASRWCAPPCSTRWTA 2
>gb|BQ468701.1|BQ468701 HM02A22r HM Hordeum vulgare subsp. vulgare cDNA clone HM02A22
5-PRIME, mRNA sequence
Length = 455
Score = 102 bits (217), Expect(2) = 2e-022
Identities = 38/58 (65%), Positives = 46/58 (79%)
Frame = -2 / +2
Query: 404 CCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP 231
C + +SP CLCAV+LS AR G+KPEVAITIPKRC++ADRPVGYKCG+YT+P
Sbjct: 245 CAAVKEIGERSPECLCAVLLSNIARRVGVKPEVAITIPKRCDLADRPVGYKCGNYTMP 418
Score = 74.4 bits (156), Expect(2) = 6e-025
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = -1 / +1
Query: 375 EPQLPVRRHAVRHRQGCRDQAGGRHYHPQALQHGRPPRRLQVRRLHAA 232
EP++P+R A++HR R QAGG H+HPQAL+ RPPRRLQVR+LH A
Sbjct: 274 EPRVPLRGAALQHRAPGRGQAGGGHHHPQALRPRRPPRRLQVRQLHHA 417
Score = 58.8 bits (122), Expect(2) = 6e-025
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = -2 / +2
Query: 515 VAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQ 375
+A G GECG ++ AL++APCI+A D S P+ CC+AV IG+
Sbjct: 131 LAGGKGECGATPPEQEALKLAPCIAAGKDLDSKPSDRCCAAVKEIGE 271
Score = 22.6 bits (43), Expect(2) = 2e-022
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3 / +3
Query: 514 WRMARGSAGEPPPTGWR*GWR 452
WR AR SA P + * WR
Sbjct: 132 WRGARASAAPPRRSRRP*SWR 194
>gb|BI959480.1|BI959480 HVSMEn0019N11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019N11f, mRNA sequence
Length = 656
Score = 108 bits (230), Expect = 3e-023
Identities = 42/81 (51%), Positives = 56/81 (69%)
Frame = -2 / +1
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSG 339
G A G GEC ADR+AL++APC +A +P+S CC+ + IG+SP CLC+VMLS
Sbjct: 106 GAASGAGECCFFLADRMALKLAPCAAATQNPRSKVAPGCCAQIRNIGRSPKCLCSVMLSI 285
Query: 338 TARAAGIKPEVAITIPKRCNM 276
TAR AG+ VA+TIP RC++
Sbjct: 286 TARQAGVNRSVAMTIPMRCSL 348
>gb|BQ661125.1|BQ661125 HM02A22u HM Hordeum vulgare subsp. vulgare cDNA clone HM02A22
3-PRIME, mRNA sequence
Length = 478
Score = 100 bits (213), Expect = 6e-021
Identities = 37/58 (63%), Positives = 45/58 (77%)
Frame = -2 / -2
Query: 404 CCSAVHTIGQSPSCLCAVMLSGTARAAGIKPEVAITIPKRCNMADRPVGYKCGDYTLP 231
C + +SP CLCAV+LS R G+KPEVAITIPKRC++ADRPVGYKCG+YT+P
Sbjct: 441 CAAVKEIGERSPECLCAVLLSNIVRRVGVKPEVAITIPKRCDLADRPVGYKCGNYTMP 268
>gb|BQ761680.1|BQ761680 EBem10_SQ001_D16_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ001_D16 5', mRNA sequence
Length = 300
Score = 100 bits (213), Expect = 6e-021
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = -2 / +2
Query: 518 GVAHGXGECGRASADRVALRMAPCISAADDPQSTPTSSCCSAVHTIGQSPSCLCAVMLSG 339
G A G GECGR ADR+AL++APC +A +P+S CC+ + +IG++P CLCAVMLS
Sbjct: 95 GAASGAGECGRVPADRMALKLAPCAAATQNPRSKVAPGCCAQIRSIGRTPKCLCAVMLST 274
Query: 338 TARAAGI 318
TAR AG+
Sbjct: 275 TARHAGV 295
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 314,552,805
Number of Sequences: 312970
Number of extensions: 7129136
Number of successful extensions: 330534
Number of sequences better than 1.0e-020: 55
length of database: 58,378,179
effective HSP length: 50
effective length of database: 42,729,679
effective search space used: 5383939554
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)