TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3062418.2.1
(851 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE422156.1|BE422156 HWM020cG.09r ITEC HWM Barley Leaf Li... 383 e-113
gb|BE195060.3|BE195060 HVSMEh0088D01f Hordeum vulgare 5-45 ... 276 e-109
gb|BU972640.1|BU972640 HB22E11r BC Hordeum vulgare subsp. v... 369 e-108
gb|AV917900.1|AV917900 AV917900 K. Sato unpublished cDNA li... 381 e-105
gb|BJ467710.1|BJ467710 BJ467710 K. Sato unpublished cDNA li... 381 e-105
gb|BJ468501.1|BJ468501 BJ468501 K. Sato unpublished cDNA li... 381 e-105
gb|BF261097.2|BF261097 HVSMEf0023M01f Hordeum vulgare seedl... 310 e-104
gb|BQ469152.1|BQ469152 HM03J01r HM Hordeum vulgare subsp. v... 342 e-101
gb|CB858437.1|CB858437 HI07A02w HI Hordeum vulgare subsp. v... 331 e-100
gb|AV919161.1|AV919161 AV919161 K. Sato unpublished cDNA li... 286 e-100
gb|AV918128.1|AV918128 AV918128 K. Sato unpublished cDNA li... 362 2e-099
gb|BJ466393.1|BJ466393 BJ466393 K. Sato unpublished cDNA li... 362 2e-099
gb|AV917579.1|AV917579 AV917579 K. Sato unpublished cDNA li... 360 5e-099
gb|BJ462494.1|BJ462494 BJ462494 K. Sato unpublished cDNA li... 331 1e-095
gb|BJ465763.1|BJ465763 BJ465763 K. Sato unpublished cDNA li... 343 6e-094
gb|BI947342.1|BI947342 HVSMEl0005D04f Hordeum vulgare spike... 342 1e-093
gb|AV920604.1|AV920604 AV920604 K. Sato unpublished cDNA li... 308 3e-091
gb|AV918262.1|AV918262 AV918262 K. Sato unpublished cDNA li... 308 6e-091
gb|CB880505.1|CB880505 HM06L21w HM Hordeum vulgare subsp. v... 333 7e-091
gb|BE231065.1|BE231065 HVSMEg0016D19f Hordeum vulgare pre-a... 279 1e-090
gb|AV919042.1|AV919042 AV919042 K. Sato unpublished cDNA li... 325 2e-088
gb|AV914116.1|AV914116 AV914116 K. Sato unpublished cDNA li... 258 1e-087
gb|CB859019.1|CB859019 HI09A13w HI Hordeum vulgare subsp. v... 246 4e-087
gb|AV917200.1|AV917200 AV917200 K. Sato unpublished cDNA li... 318 3e-086
gb|AV918243.1|AV918243 AV918243 K. Sato unpublished cDNA li... 308 4e-083
gb|AV918260.1|AV918260 AV918260 K. Sato unpublished cDNA li... 307 5e-083
gb|BM100114.2|BM100114 EBma01_SQ001_D19_R maternal, 4 DPA, ... 189 4e-082
gb|AV921410.1|AV921410 AV921410 K. Sato unpublished cDNA li... 299 1e-080
gb|AV912838.1|AV912838 AV912838 K. Sato unpublished cDNA li... 231 2e-080
gb|CA028155.1|CA028155 HZ61C14r HZ Hordeum vulgare subsp. v... 297 4e-080
gb|AV915968.1|AV915968 AV915968 K. Sato unpublished cDNA li... 258 4e-076
gb|BM375888.2|BM375888 EBem06_SQ004_L04_R embryo, 21 DPA, n... 283 1e-075
gb|BQ755347.1|BQ755347 EBed07_SQ002_J07_R endosperm, 28 DPA... 268 5e-074
gb|BU986792.1|BU986792 HF12O16r HF Hordeum vulgare subsp. v... 268 5e-074
gb|BQ764926.1|BQ764926 EBca01_SQ005_E07_R carpel, pre-anthe... 204 1e-072
gb|BJ468274.1|BJ468274 BJ468274 K. Sato unpublished cDNA li... 271 4e-072
gb|AV915505.1|AV915505 AV915505 K. Sato unpublished cDNA li... 153 5e-072
gb|BQ661453.1|BQ661453 HM03J01u HM Hordeum vulgare subsp. v... 269 2e-071
gb|BU984559.1|BU984559 HF04E16r HF Hordeum vulgare subsp. v... 257 9e-071
gb|BJ467618.1|BJ467618 BJ467618 K. Sato unpublished cDNA li... 256 3e-070
gb|BU994352.1|BU994352 HM06L21r HM Hordeum vulgare subsp. v... 161 2e-068
gb|AV913933.1|AV913933 AV913933 K. Sato unpublished cDNA li... 258 4e-068
gb|AV921547.1|AV921547 AV921547 K. Sato unpublished cDNA li... 258 4e-068
gb|BE420971.1|BE420971 HWM004.D12 ITEC HWM Barley Leaf Libr... 223 3e-067
gb|BM444610.1|BM444610 EBem09_SQ005_O09_R embryo, 1 Day ger... 253 7e-067
gb|CA027495.1|CA027495 HZ59B20r HZ Hordeum vulgare subsp. v... 253 9e-067
gb|BJ463364.1|BJ463364 BJ463364 K. Sato unpublished cDNA li... 171 1e-062
gb|BJ464115.1|BJ464115 BJ464115 K. Sato unpublished cDNA li... 171 1e-062
gb|BJ462547.1|BJ462547 BJ462547 K. Sato unpublished cDNA li... 189 1e-062
gb|CK124362.1|CK124362 BES1824108i03 BES1824 Hordeum vulgar... 236 2e-062
gb|AV921892.1|AV921892 AV921892 K. Sato unpublished cDNA li... 239 2e-062
gb|BG367505.2|BG367505 HVSMEi0012I04f Hordeum vulgare 20 DA... 196 3e-062
gb|BE601818.2|BE601818 HVSMEh0099K11f Hordeum vulgare 5-45 ... 228 4e-062
gb|BI951308.1|BI951308 HVSMEl0025H09f Hordeum vulgare spike... 226 1e-061
gb|CV059036.1|CV059036 BNEL43f6 Barley EST endosperm librar... 171 1e-060
gb|BE601810.2|BE601810 HVSMEh0099K03f Hordeum vulgare 5-45 ... 223 1e-059
gb|BQ466282.1|BQ466282 HT02B16r HT Hordeum vulgare subsp. v... 219 2e-059
gb|BM444609.1|BM444609 EBem09_SQ005_O07_R embryo, 1 Day ger... 167 5e-058
gb|BQ464272.1|BQ464272 HF01M24T HF Hordeum vulgare subsp. v... 184 4e-057
gb|BU986160.1|BU986160 HF09N16r HF Hordeum vulgare subsp. v... 182 1e-056
gb|BE193330.2|BE193330 HVSMEh0080J19f Hordeum vulgare 5-45 ... 144 6e-056
gb|BI947748.1|BI947748 HVSMEl0006L16f Hordeum vulgare spike... 200 1e-053
gb|BE454083.2|BE454083 HVSMEh0080E16f Hordeum vulgare 5-45 ... 194 6e-052
gb|BQ659818.1|BQ659818 HF01M24w HF Hordeum vulgare subsp. v... 193 1e-051
gb|BJ465257.1|BJ465257 BJ465257 K. Sato unpublished cDNA li... 133 2e-051
gb|AJ433290.1|AJ433290 AJ433290 S00002 Hordeum vulgare subs... 200 7e-051
gb|BI948619.1|BI948619 HVSMEl0010E10f Hordeum vulgare spike... 152 1e-050
gb|BG344496.1|BG344496 HVSMEg0009H02f Hordeum vulgare pre-a... 195 2e-049
gb|AL509490.1|AL509490 AL509490 Hordeum vulgare Barke devel... 195 3e-049
gb|BE601804.3|BE601804 HVSMEh0099J17f Hordeum vulgare 5-45 ... 185 3e-049
gb|AV917011.1|AV917011 AV917011 K. Sato unpublished cDNA li... 121 1e-047
gb|AV913558.1|AV913558 AV913558 K. Sato unpublished cDNA li... 121 1e-047
gb|AV918859.1|AV918859 AV918859 K. Sato unpublished cDNA li... 142 7e-047
gb|BU986567.1|BU986567 HF12E04r HF Hordeum vulgare subsp. v... 154 3e-046
gb|CV054913.1|CV054913 BNEL114f9 Barley EST endosperm libra... 165 7e-045
gb|BQ764256.1|BQ764256 EBan01_SQ005_G11_R anther, yellow st... 172 2e-043
gb|BE196433.2|BE196433 HVSMEh0092E14f Hordeum vulgare 5-45 ... 118 3e-043
gb|AV920097.1|AV920097 AV920097 K. Sato unpublished cDNA li... 174 7e-043
gb|BQ755335.1|BQ755335 EBed07_SQ002_G10_R endosperm, 28 DPA... 167 2e-042
gb|BQ764858.1|BQ764858 EBca01_SQ005_H06_R carpel, pre-anthe... 172 2e-042
gb|BE196548.3|BE196548 HVSMEh0092J16f Hordeum vulgare 5-45 ... 138 6e-042
gb|CV053661.1|CV053661 BNEL101g2 Barley EST endosperm libra... 160 7e-042
gb|BI949909.1|BI949909 HVSMEl0016O06f Hordeum vulgare spike... 162 7e-042
gb|BQ657405.1|BQ657405 HA08I10u HA Hordeum vulgare subsp. v... 157 7e-041
gb|BM100134.2|BM100134 EBma01_SQ001_E17_R maternal, 4 DPA, ... 146 4e-039
gb|CB880520.1|CB880520 HM06M21w HM Hordeum vulgare subsp. v... 158 3e-038
gb|BJ463709.1|BJ463709 BJ463709 K. Sato unpublished cDNA li... 129 2e-036
gb|BQ661086.1|BQ661086 HM01N16w HM Hordeum vulgare subsp. v... 149 2e-036
gb|BM373123.2|BM373123 EBma04_SQ003_D03_R maternal, 10 DPA,... 71 6e-036
gb|BG368358.1|BG368358 HVSMEi0017P04f Hordeum vulgare 20 DA... 108 1e-035
gb|BQ758950.1|BQ758950 EBma07_SQ003_G09_R maternal, 21 DPA,... 108 1e-034
gb|BU976211.1|BU976211 HA03F10u HA Hordeum vulgare subsp. v... 135 2e-034
gb|BM441924.2|BM441924 EBed07_SQ001_O24_R endosperm, 28 DPA... 105 6e-034
gb|AV922174.1|AV922174 AV922174 K. Sato unpublished cDNA li... 128 6e-034
gb|AV916876.1|AV916876 AV916876 K. Sato unpublished cDNA li... 128 6e-034
gb|BM373002.2|BM373002 EBma04_SQ002_L05_R maternal, 10 DPA,... 71 9e-034
gb|BQ468777.1|BQ468777 HM02F02r HM Hordeum vulgare subsp. v... 129 1e-033
gb|BU970797.1|BU970797 HB15L12r BC Hordeum vulgare subsp. v... 102 7e-033
gb|BG418369.2|BG418369 HVSMEk0022H13f Hordeum vulgare testa... 130 1e-032
gb|BU977487.1|BU977487 HA11I05r HA Hordeum vulgare subsp. v... 71 1e-032
gb|BU995809.1|BU995809 HM11G24r HM Hordeum vulgare subsp. v... 129 2e-032
gb|AL502045.1|AL502045 AL502045 Hordeum vulgare Barke roots... 136 1e-031
gb|BF254222.2|BF254222 HVSMEf0003F20f Hordeum vulgare seedl... 78 3e-031
gb|BQ465020.1|BQ465020 HU02G21r HU Hordeum vulgare subsp. v... 122 2e-030
gb|BF623927.2|BF623927 HVSMEa0007M14f Hordeum vulgare seedl... 89 9e-030
gb|AV936469.1|AV936469 AV936469 K. Sato unpublished cDNA li... 129 2e-029
gb|BJ473760.1|BJ473760 BJ473760 K. Sato unpublished cDNA li... 129 2e-029
gb|BJ474408.1|BJ474408 BJ474408 K. Sato unpublished cDNA li... 129 2e-029
gb|AL505468.1|AL505468 AL505468 Hordeum vulgare Barke roots... 77 7e-029
gb|AV916601.1|AV916601 AV916601 K. Sato unpublished cDNA li... 61 8e-029
gb|CA018105.1|CA018105 HV07H15r HV Hordeum vulgare subsp. v... 126 1e-028
gb|BG415057.1|BG415057 HVSMEk0004O20f Hordeum vulgare testa... 115 2e-028
gb|BG301241.1|BG301241 HVSMEb0020C10f Hordeum vulgare seedl... 83 9e-028
gb|BG300683.1|BG300683 HVSMEb0017P19f Hordeum vulgare seedl... 56 1e-027
gb|AV921614.1|AV921614 AV921614 K. Sato unpublished cDNA li... 122 3e-027
gb|BQ759428.1|BQ759428 EBpi01_SQ004_B14_R pistil, 1 DPA, no... 121 7e-027
gb|CA023147.1|CA023147 HZ45F22r HZ Hordeum vulgare subsp. v... 75 8e-027
gb|BI954140.1|BI954140 HVSMEm0016F19f Hordeum vulgare green... 69 3e-026
gb|CD662781.1|CD662781 UCRHV18_03ad10_b1 Drought-stressed D... 79 4e-026
gb|BE437689.1|BE437689 SFR006.D12F990705 ITEC SFR Barley Le... 76 5e-026
gb|BJ467881.1|BJ467881 BJ467881 K. Sato unpublished cDNA li... 117 6e-026
gb|BE601859.2|BE601859 HVSMEh0099M17f Hordeum vulgare 5-45 ... 106 9e-026
gb|BJ475687.1|BJ475687 BJ475687 K. Sato unpublished cDNA li... 115 3e-025
gb|CB881964.1|CB881964 HM11G24w HM Hordeum vulgare subsp. v... 115 3e-025
gb|CA028544.1|CA028544 HZ62G02r HZ Hordeum vulgare subsp. v... 100 3e-025
gb|BQ663387.1|BQ663387 HU02G21u HU Hordeum vulgare subsp. v... 103 1e-024
gb|BM441741.2|BM441741 EBed07_SQ001_G19_R endosperm, 28 DPA... 102 2e-024
gb|CV055701.1|CV055701 BNEL122e5 Barley EST endosperm libra... 94 3e-024
gb|BE420576.1|BE420576 HWM000.D01 ITEC HWM Barley Leaf Libr... 93 4e-023
gb|BJ466112.1|BJ466112 BJ466112 K. Sato unpublished cDNA li... 90 2e-022
gb|AV919354.1|AV919354 AV919354 K. Sato unpublished cDNA li... 105 2e-022
gb|BJ466129.1|BJ466129 BJ466129 K. Sato unpublished cDNA li... 105 2e-022
gb|BQ766937.1|BQ766937 EBro08_SQ007_D17_R root, 3 week, dro... 60 5e-022
gb|BG417583.2|BG417583 HVSMEk0018E23f Hordeum vulgare testa... 60 7e-022
gb|CA010249.1|CA010249 HT11B14u HT Hordeum vulgare subsp. v... 94 8e-022
gb|AV929747.1|AV929747 AV929747 K. Sato unpublished cDNA li... 83 1e-021
gb|AV916609.1|AV916609 AV916609 K. Sato unpublished cDNA li... 61 5e-021
>gb|BE422156.1|BE422156 HWM020cG.09r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM020cG.09, mRNA sequence
Length = 1023
Score = 383 bits (830), Expect(2) = e-113
Identities = 148/189 (78%), Positives = 165/189 (87%)
Frame = +1 / +1
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K PKFTP +AK+VKGSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGK
Sbjct: 199 KERLPKFTPAEAKMVKGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGK 378
Query: 295 PIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQ 474
PIGP+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+
Sbjct: 379 PIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVR 558
Query: 475 FYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKAS 654
FY+ YL+EL+KAID GA+V GYFAWSLLDNFEW SGY+ KFGIVYVDF++P L+RHPKAS
Sbjct: 559 FYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSXKFGIVYVDFNSPNLDRHPKAS 738
Query: 655 AYWFRDMLQ 681
AYWFRD+L+
Sbjct: 739 AYWFRDLLR 765
Score = 289 bits (626), Expect(2) = 5e-084
Identities = 139/186 (74%), Positives = 144/186 (77%)
Frame = -1 / -2
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNL *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 755 SLNQ*ADALGCRSRLGLLKST*TMPNLXE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 576
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 575 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 396
Query: 311 ACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVN 132
A GPIGLPF SK TCQSAE*LVG C S+FWPF LAVY LIP+*SAEPLT LA +GVN
Sbjct: 395 AFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVYWLIPI*SAEPLTILASAGVN 216
Query: 131 LGQPLF 114
LG F
Sbjct: 215 LGNLSF 198
Score = 226 bits (488), Expect(2) = 5e-060
Identities = 102/184 (55%), Positives = 130/184 (70%)
Frame = -3 / -1
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++L RV PL+VVEERP EVA +VGA +DG Q
Sbjct: 762 QKVSEPVGRRLGVPIQVGAVEVDVDDAELXRVAGHPLKVVEERPREVAENVGATVDGLLQ 583
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 582 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 403
Query: 318 *IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLR 139
IRLW +R A+ I NLPI *+A R LL+QFLALH AS VL+DPN++R ALD S R
Sbjct: 402 RIRLWPNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLVDPNIVRGALDHFSFSR 223
Query: 138 SKLG 127
S+LG
Sbjct: 222 SELG 211
Score = 177 bits (382), Expect(2) = 5e-048
Identities = 92/186 (49%), Positives = 113/186 (60%)
Frame = +3 / +3
Query: 114 KERLPQVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQ 293
+ + QV+S S* GQGL GL+WDQ +H * EGPE A A+A L S LAG +C + Q
Sbjct: 198 EREVAQVHSC*S*NGQGLRGLYWDQPVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQ 377
Query: 294 TDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGA 473
D GEF++ALHRP DV + L + +V + HN +RNGSA + PVPA H +G
Sbjct: 378 ADWAKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGP 557
Query: 474 ILQRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGV 653
+L LP+ AEE H VSPRQL V VRL VQV +RLRRLQ Q + PQGV
Sbjct: 558 VLPELPQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGV 737
Query: 654 SLLVQR 671
LLVQR
Sbjct: 738 GLLVQR 755
Score = 125 bits (268), Expect(3) = 2e-036
Identities = 68/141 (48%), Positives = 83/141 (58%)
Frame = +2 / +2
Query: 116 REAAPSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTAN 295
+ PS L KL WSRA R LGS +T LA+*RARNC SR A Q IGR M A+
Sbjct: 200 KRGCPSSLLLKLKWSRAPRTILGSTSTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMAS 379
Query: 296 RSDHRRIQSGFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCN 475
R RRI++G TSS +GC T + S ++ S* +TEWIS+ STC T +G
Sbjct: 380 RLGQRRIRTGSTSSHRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSG 559
Query: 476 STKATSLS*GKPSMTAPTWLA 538
ST ATS S* +PS APT+ A
Sbjct: 560 STGATSAS*RRPSTVAPTFSA 622
Score = 68.9 bits (144), Expect(3) = 1e-033
Identities = 34/80 (42%), Positives = 45/80 (56%)
Frame = -2 / -3
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 574 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 395
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+ +S C +H PAN+L
Sbjct: 394 PLAQSACHFSQRHR*PANRL 335
Score = 65.2 bits (136), Expect(3) = 1e-033
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = -2 / -3
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +T T + T+T+SCRGET
Sbjct: 754 L*TSRPTPWGADPGWGC*SRRRRCRTXTSSRTSTQSCRGET 632
Score = 47.3 bits (97), Expect(3) = 1e-033
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = -1 / -1
Query: 161 LTNLACSGVNLGQPLFHNILHYLWIMSIY 75
L + + S LGQPLFH +LHYLW+M +Y
Sbjct: 246 LDHFSFSRSELGQPLFHKVLHYLWVMPVY 160
Score = 46.9 bits (96), Expect(2) = e-113
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +1
Query: 75 INGHYPQIMQDIVKERLPQ 131
INGHYPQIMQD+VKERLP+
Sbjct: 160 INGHYPQIMQDLVKERLPK 216
Score = 42.3 bits (86), Expect(2) = 5e-084
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2 / -2
Query: 127 GSLSFTISCIICG*CPFI 74
G+LSFT SCIICG*CPFI
Sbjct: 212 GNLSFTRSCIICG*CPFI 159
Score = 33.6 bits (67), Expect(3) = 2e-036
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2 / +2
Query: 641 TPRRQPTGSETCSRNTYERLTTKPEIGTIKFLQRC 745
TPRR+PTGSET Y T P + I C
Sbjct: 725 TPRRRPTGSETFCDTEYGWSTLNPNLSCITSYMIC 829
Score = 33.6 bits (67), Expect(2) = 5e-048
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 85 IIHR*CKIL*KRGCP 129
I HR*CK L*KRGCP
Sbjct: 170 ITHR*CKTL*KRGCP 214
Score = 31.8 bits (63), Expect(3) = 2e-036
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2 / +3
Query: 68 PLNKWTLSTDNARYCEREAA 127
P +K L TDNAR CERE A
Sbjct: 153 PADKRALPTDNARPCEREVA 212
Score = 25.4 bits (49), Expect(2) = 5e-060
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -3 / -3
Query: 126 AASLSQYLALSVDNVHLFNG 67
A SLSQ LALSV N L G
Sbjct: 211 ATSLSQGLALSVGNARLSAG 152
>gb|BE195060.3|BE195060 HVSMEh0088D01f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0088D01f, mRNA sequence
Length = 803
Score = 276 bits (598), Expect(5) = e-109
Identities = 109/143 (76%), Positives = 120/143 (83%)
Frame = +1 / +1
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K PKFTP +AK+V GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGK
Sbjct: 112 KERLPKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGK 291
Query: 295 PIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQ 474
PIGP+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+
Sbjct: 292 PIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVR 471
Query: 475 FYKGYLAELRKAIDDGADVAGYF 543
FY+ YL EL+KAID GA+V G+F
Sbjct: 472 FYRSYLIELKKAIDSGANVLGFF 540
Score = 210 bits (454), Expect(5) = 6e-080
Identities = 102/143 (71%), Positives = 106/143 (74%)
Frame = -1 / -1
Query: 542 K*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR* 363
K P T AP SMAF SS R* *N TLVVS RYW RV PG*SIPFSVM GFPY R*
Sbjct: 539 KKPRTLAPLSMAFFSSIR*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR* 360
Query: 362 FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LI 183
T PYIP GTM*S FEFA GPIGLPF SK TCQSAE*LVG C S+FWPF LAVY*LI
Sbjct: 359 CTHPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LI 180
Query: 182 PM*SAEPLTNLACSGVNLGQPLF 114
P+*SAEP+T LA +GVNLG F
Sbjct: 179 PI*SAEPMTILASAGVNLGNLSF 111
Score = 162 bits (348), Expect(5) = 4e-064
Identities = 73/141 (51%), Positives = 96/141 (68%)
Frame = -3 / -3
Query: 549 PSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVL 370
P++ A +VGA +DG QL +VA VE P V QVL + LIHSV Y++ + +L+
Sbjct: 546 PAKEAENVGATVDGLLQLDKVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLA 367
Query: 369 QIVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVL 190
++VH +HP WDDV+P+ IRLWS+R A+ I NLPI *+A R LL+QFLALH AS VL
Sbjct: 366 EVVHAPIHPRWDDVEPVRIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVL 187
Query: 189 IDPNVIR*ALDQLSLLRSKLG 127
IDPN++R A D S RS+LG
Sbjct: 186 IDPNIVRGAHDHFSFSRSELG 124
Score = 128 bits (274), Expect(5) = 2e-050
Identities = 64/133 (48%), Positives = 82/133 (61%)
Frame = +3 / +3
Query: 114 KERLPQVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQ 293
+ + QV+S S* G GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q
Sbjct: 111 EREVAQVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQ 290
Query: 294 TDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGA 473
D T GEF++ALHRP DV + L + +V + HN +RNGSA + PVPA H +G
Sbjct: 291 ADWTKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGP 470
Query: 474 ILQRLPR*AEESH 512
+L LP AEE H
Sbjct: 471 VLPELPYRAEEGH 509
Score = 124 bits (265), Expect(3) = 2e-036
Identities = 68/141 (48%), Positives = 83/141 (58%)
Frame = +2 / +2
Query: 116 REAAPSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTAN 295
+ PS L KL WS A R LGSI+T LA+*RARNC SR A Q IGR M A+
Sbjct: 113 KRGCPSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMAS 292
Query: 296 RSDHRRIQSGFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCN 475
R D RRI++G TSS +GC T + S ++ S* +TEWIS+ STC T +G
Sbjct: 293 RLDQRRIRTGSTSSHRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSG 472
Query: 476 STKATSLS*GKPSMTAPTWLA 538
ST AT S* +PS APT+ A
Sbjct: 473 STGATLSS*RRPSTVAPTFSA 535
Score = 70.7 bits (148), Expect(4) = 4e-027
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / -2
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 487 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 308
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 307 PLVQSACHFSQRHR*PANRL 248
Score = 65.2 bits (136), Expect(5) = e-109
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +1 / +2
Query: 541 FAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPK 648
FA SLLDNFEW +GY+SKFGIVYVDF+ P L P+
Sbjct: 539 FAGSLLDNFEWMAGYSSKFGIVYVDFNNPNLGSAPQ 646
Score = 60.6 bits (126), Expect(5) = e-109
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +2 / +1
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NSTEDQAAAQRARDFHVGWF DPL
Sbjct: 1 NSTEDQAAAQRARDFHVGWFVDPL 72
Score = 54.7 bits (113), Expect(5) = 4e-064
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -1 / -3
Query: 644 GCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK 540
G LG+LKST*T+PNLD *P HSKLSRRD AK
Sbjct: 642 GADPRLGLLKST*TMPNLDE*PAIHSKLSRRDPAK 538
Score = 46.9 bits (96), Expect(5) = e-109
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +1
Query: 75 INGHYPQIMQDIVKERLPQ 131
INGHYPQIMQD+VKERLP+
Sbjct: 73 INGHYPQIMQDLVKERLPK 129
Score = 46.0 bits (94), Expect(5) = 6e-080
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1 / -3
Query: 131 LGQPLFHNILHYLWIMSIY 75
LGQPLFH +LHYLW+M +Y
Sbjct: 129 LGQPLFHKVLHYLWVMPVY 73
Score = 45.1 bits (92), Expect(4) = 4e-027
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = -3 / -2
Query: 648 LGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSE 541
LG ++G EV VDD++LGRV PL+VVE+RP E
Sbjct: 646 LGCRSQVGVVEVHVDDAELGRVAGHPLKVVEKRPRE 539
Score = 44.1 bits (90), Expect(5) = 2e-050
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1 / +3
Query: 4 LNRRPSSGSKSKGFPCWLVC 63
LN RPSS SKS+G PCWLVC
Sbjct: 3 LN*RPSSSSKSQGLPCWLVC 62
Score = 43.7 bits (89), Expect(5) = 6e-080
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -2 / -1
Query: 637 VRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
+ W C*S RRR +TWT + +T+SCR ET
Sbjct: 635 IPGWGC*SPRRRCRTWTSSRPSTQSCREET 546
Score = 42.3 bits (86), Expect(5) = 4e-064
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2 / -1
Query: 127 GSLSFTISCIICG*CPFI 74
G+LSFT SCIICG*CPFI
Sbjct: 125 GNLSFTRSCIICG*CPFI 72
Score = 37.7 bits (76), Expect(5) = 6e-080
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -3 / -1
Query: 72 NGSANQPTWKSXXXXXXAWSSVE 4
+GS NQPTWKS AWSSVE
Sbjct: 71 SGSTNQPTWKSLAL*AAAWSSVE 3
Score = 37.7 bits (76), Expect(5) = 2e-050
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1 / +3
Query: 619 STPKLERHPKASAYWFRDML 678
+TP +RHPKASAYWF+ L
Sbjct: 618 TTPTWDRHPKASAYWFKKPL 677
Score = 37.3 bits (75), Expect(5) = 4e-064
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 67 ISKPTNMEIPCSLSRCLVFG*V 2
+ KP NME+P SLS CLVF *V
Sbjct: 66 VDKPANMEVPGSLSCCLVFS*V 1
Score = 35.4 bits (71), Expect(4) = 4e-027
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -2 / -2
Query: 196 CID*SQCNPLSP*PT*LAPE*TWGS 122
C D*SQ +P SP*P *L E*TW +
Sbjct: 193 CTD*SQYSPRSP*PF*LQQE*TWAT 119
Score = 35.4 bits (71), Expect(5) = 6e-080
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -1 / -2
Query: 668 LNQ*ADALGCRSSLGVLK 615
LNQ*ADALGCRS +GV++
Sbjct: 667 LNQ*ADALGCRSQVGVVE 614
Score = 34.5 bits (69), Expect(3) = 2e-036
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +2
Query: 3 TQPKTKQRLKEQGISMLVGL 62
TQ KTKQ+LKE G SML GL
Sbjct: 2 TQLKTKQQLKEPGTSMLAGL 61
Score = 33.6 bits (67), Expect(5) = 2e-050
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 85 IIHR*CKIL*KRGCP 129
I HR*CK L*KRGCP
Sbjct: 83 ITHR*CKTL*KRGCP 127
Score = 31.8 bits (63), Expect(3) = 2e-036
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2 / +3
Query: 68 PLNKWTLSTDNARYCEREAA 127
P +K L TDNAR CERE A
Sbjct: 66 PADKRALPTDNARPCEREVA 125
Score = 29.5 bits (58), Expect(5) = 2e-050
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +3 / +1
Query: 549 VSPRQLRVAVRLHVQVWNRLRRLQHAQ 629
VS RQL V RL VQV +RLR LQ Q
Sbjct: 547 VSSRQL*VDGRLLVQVRHRLRGLQQPQ 627
Score = 25.4 bits (49), Expect(4) = 4e-027
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -3 / -2
Query: 126 AASLSQYLALSVDNVHLFNG 67
A SLSQ LALSV N L G
Sbjct: 124 ATSLSQGLALSVGNARLSAG 65
Score = 23.5 bits (45), Expect(5) = 4e-064
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2 / -3
Query: 685 VSGACL*TSRLTPWG 641
VS *TSR TPWG
Sbjct: 684 VSQEVF*TSRPTPWG 640
Score = 22.6 bits (43), Expect(5) = e-109
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2 / +1
Query: 641 TPRRQPTGSETCSRN 685
TPRR+PTG + R+
Sbjct: 640 TPRRRPTGLKNLLRH 684
>gb|BU972640.1|BU972640 HB22E11r BC Hordeum vulgare subsp. vulgare cDNA clone HB22E11
5-PRIME, mRNA sequence
Length = 591
Score = 369 bits (799), Expect(2) = e-108
Identities = 144/182 (79%), Positives = 159/182 (87%)
Frame = +1 / +1
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K PKFTP +AK+VKGSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGK
Sbjct: 46 KERLPKFTPAEAKMVKGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGK 225
Query: 295 PIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQ 474
PIGP+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+
Sbjct: 226 PIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVR 405
Query: 475 FYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKAS 654
FY+ YL+EL+KAID GA+V GYFAWSLLDNFEW SGY+SKFGIVYVDF++P L+RHPKAS
Sbjct: 406 FYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKAS 585
Query: 655 AY 660
AY
Sbjct: 586 AY 591
Score = 284 bits (614), Expect(2) = 5e-081
Identities = 136/182 (74%), Positives = 141/182 (77%)
Frame = -1 / -2
Query: 659 *ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL 480
*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS R*
Sbjct: 590 *ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR 411
Query: 479 *NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGP 300
*N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEFA GP
Sbjct: 410 *NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGP 231
Query: 299 IGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLGQP 120
IGLPF SK TCQSAE*LVG C S+FWPF LAVY LIP+*SAEPLT LA +GVNLG
Sbjct: 230 IGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVYWLIPI*SAEPLTILASAGVNLGNL 51
Query: 119 LF 114
F
Sbjct: 50 SF 45
Score = 220 bits (474), Expect(2) = 3e-057
Identities = 99/178 (55%), Positives = 126/178 (70%)
Frame = -3 / -1
Query: 660 VG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAF 481
VG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG QL+EVA
Sbjct: 591 VGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAP 412
Query: 480 VELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWS 301
VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+ IRLW
Sbjct: 411 VEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWP 232
Query: 300 DRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLRSKLG 127
+R A+ I NLPI *+A R LL+QFLALH AS VL+DPN++R ALD S RS+LG
Sbjct: 231 NRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLVDPNIVRGALDHFSFSRSELG 58
Score = 169 bits (364), Expect(2) = 2e-045
Identities = 88/182 (48%), Positives = 109/182 (59%)
Frame = +3 / +3
Query: 114 KERLPQVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQ 293
+ + QV+S S* GQGL GL+WDQ +H * EGPE A A+A L S LAG +C + Q
Sbjct: 45 EREVAQVHSC*S*NGQGLRGLYWDQPVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQ 224
Query: 294 TDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGA 473
D GEF++ALHRP DV + L + +V + HN +RNGSA + PVPA H +G
Sbjct: 225 ADWAKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGP 404
Query: 474 ILQRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGV 653
+L LP+ AEE H VSPRQL V VRL VQV +RLRRLQ Q + PQGV
Sbjct: 405 VLPELPQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGV 584
Query: 654 SL 659
L
Sbjct: 585 GL 590
Score = 125 bits (268), Expect(2) = 1e-030
Identities = 68/141 (48%), Positives = 83/141 (58%)
Frame = +2 / +2
Query: 116 REAAPSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTAN 295
+ PS L KL WSRA R LGS +T LA+*RARNC SR A Q IGR M A+
Sbjct: 47 KRGCPSSLLLKLKWSRAPRTILGSTSTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMAS 226
Query: 296 RSDHRRIQSGFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCN 475
R RRI++G TSS +GC T + S ++ S* +TEWIS+ STC T +G
Sbjct: 227 RLGQRRIRTGSTSSHRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSG 406
Query: 476 STKATSLS*GKPSMTAPTWLA 538
ST ATS S* +PS APT+ A
Sbjct: 407 STGATSAS*RRPSTVAPTFSA 469
Score = 68.9 bits (144), Expect(3) = 1e-032
Identities = 34/80 (42%), Positives = 45/80 (56%)
Frame = -2 / -3
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 421 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 242
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+ +S C +H PAN+L
Sbjct: 241 PLAQSACHFSQRHR*PANRL 182
Score = 64.8 bits (135), Expect(3) = 1e-032
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = -2 / -3
Query: 658 RLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
R TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 589 RPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 479
Score = 44.1 bits (90), Expect(3) = 1e-032
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -1 / -1
Query: 161 LTNLACSGVNLGQPLFHNILHYLWIMSI 78
L + + S LGQPLFH +LHYLW+M +
Sbjct: 93 LDHFSFSRSELGQPLFHKVLHYLWVMPV 10
Score = 42.8 bits (87), Expect(2) = e-108
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +3 / +1
Query: 78 NGHYPQIMQDIVKERLPQ 131
+GHYPQIMQD+VKERLP+
Sbjct: 10 DGHYPQIMQDLVKERLPK 63
Score = 37.7 bits (76), Expect(2) = 5e-081
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2 / -2
Query: 127 GSLSFTISCIICG*CP 80
G+LSFT SCIICG*CP
Sbjct: 59 GNLSFTRSCIICG*CP 12
Score = 33.6 bits (67), Expect(2) = 2e-045
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 85 IIHR*CKIL*KRGCP 129
I HR*CK L*KRGCP
Sbjct: 17 ITHR*CKTL*KRGCP 61
Score = 27.6 bits (54), Expect(2) = 1e-030
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / +3
Query: 86 LSTDNARYCEREAA 127
L TDNAR CERE A
Sbjct: 18 LPTDNARPCEREVA 59
Score = 22.6 bits (43), Expect(2) = 3e-057
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / -3
Query: 126 AASLSQYLALSVDN 85
A SLSQ LALSV N
Sbjct: 58 ATSLSQGLALSVGN 17
>gb|AV917900.1|AV917900 AV917900 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17a02 3', mRNA sequence
Length = 691
Score = 381 bits (826), Expect = e-105
Identities = 147/185 (79%), Positives = 164/185 (88%)
Frame = +1 / -1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFTP +AK+V GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGKPIGP
Sbjct: 688 PKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGP 509
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+FY+
Sbjct: 508 KANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRS 329
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKASAYWF 666
YL+EL+KAID GA+V GYFAWSLLDNFEW SGY+SKFGIVYVDF++P L+RHPKASAYWF
Sbjct: 328 YLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKASAYWF 149
Query: 667 RDMLQ 681
RD+L+
Sbjct: 148 RDLLR 134
Score = 293 bits (635), Expect = 7e-079
Identities = 139/182 (76%), Positives = 145/182 (79%)
Frame = -1 / +3
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 144 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 323
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 324 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 503
Query: 311 ACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVN 132
A GPIGLPF SK TCQSAE*LVG C S+FWPF LAVY*LIP+*SAEP+T LA +GVN
Sbjct: 504 AFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIPI*SAEPMTILASAGVN 683
Query: 131 LG 126
LG
Sbjct: 684 LG 689
Score = 229 bits (494), Expect = 2e-059
Identities = 104/184 (56%), Positives = 131/184 (71%)
Frame = -3 / +2
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 137 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 316
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 317 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 496
Query: 318 *IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLR 139
IRLWS+R A+ I NLPI *+A R LL+QFLALH AS VLIDPN++R A D S R
Sbjct: 497 RIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLIDPNIVRGAHDHFSFSR 676
Query: 138 SKLG 127
S+LG
Sbjct: 677 SELG 688
Score = 179 bits (386), Expect = 1e-044
Identities = 93/181 (51%), Positives = 112/181 (61%)
Frame = +3 / -3
Query: 129 QVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTT 308
QV+S S* G GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q D T
Sbjct: 686 QVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWTK 507
Query: 309 GEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRL 488
GEF++ALHRP DV + L + +V + HN +RNGSA + PVPA H +G +L L
Sbjct: 506 GEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVLPEL 327
Query: 489 PR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGVSLLVQ 668
P+ AEE H VSPRQL V VRL VQV +RLRRLQ Q + PQGV LLVQ
Sbjct: 326 PQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGVGLLVQ 147
Query: 669 R 671
R
Sbjct: 146 R 144
Score = 126 bits (270), Expect(2) = 3e-031
Identities = 69/137 (50%), Positives = 83/137 (60%)
Frame = +2 / -2
Query: 128 PSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDH 307
PS L KL WS A R LGSI+T LA+*RARNC SR A Q IGR M A+R D
Sbjct: 687 PSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLDQ 508
Query: 308 RRIQSGFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKA 487
RRI++G TSS +GC T + S ++ S* +TEWIS+ STC T +G ST A
Sbjct: 507 RRIRTGSTSSHRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSGSTGA 328
Query: 488 TSLS*GKPSMTAPTWLA 538
TS S* +PS APT+ A
Sbjct: 327 TSAS*RRPSTVAPTFSA 277
Score = 71.2 bits (149), Expect(3) = 2e-032
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +1
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 145 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 267
Score = 70.7 bits (148), Expect(3) = 2e-032
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / +1
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 325 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 504
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 505 PLVQSACHFSQRHR*PANRL 564
Score = 35.0 bits (70), Expect(3) = 2e-032
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / +1
Query: 196 CID*SQCNPLSP*PT*LAPE*TW 128
C D*SQ +P SP*P *L E*TW
Sbjct: 619 CTD*SQYSPRSP*PF*LQQE*TW 687
Score = 28.6 bits (56), Expect(2) = 3e-031
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -2
Query: 641 TPRRQPTGSETCSRNTY 691
TPRR+PTGSET Y
Sbjct: 174 TPRRRPTGSETFCDTEY 124
>gb|BJ467710.1|BJ467710 BJ467710 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29i09 3', mRNA sequence
Length = 712
Score = 381 bits (826), Expect = e-105
Identities = 147/185 (79%), Positives = 164/185 (88%)
Frame = +1 / -2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFTP +AK+V GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGKPIGP
Sbjct: 705 PKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGP 526
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+FY+
Sbjct: 525 KANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRS 346
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKASAYWF 666
YL+EL+KAID GA+V GYFAWSLLDNFEW SGY+SKFGIVYVDF++P L+RHPKASAYWF
Sbjct: 345 YLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKASAYWF 166
Query: 667 RDMLQ 681
RD+L+
Sbjct: 165 RDLLR 151
Score = 293 bits (635), Expect = 7e-079
Identities = 139/182 (76%), Positives = 145/182 (79%)
Frame = -1 / +2
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 161 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 340
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 341 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 520
Query: 311 ACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVN 132
A GPIGLPF SK TCQSAE*LVG C S+FWPF LAVY*LIP+*SAEP+T LA +GVN
Sbjct: 521 AFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIPI*SAEPMTILASAGVN 700
Query: 131 LG 126
LG
Sbjct: 701 LG 706
Score = 229 bits (494), Expect = 2e-059
Identities = 104/184 (56%), Positives = 131/184 (71%)
Frame = -3 / +1
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 154 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 333
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 334 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 513
Query: 318 *IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLR 139
IRLWS+R A+ I NLPI *+A R LL+QFLALH AS VLIDPN++R A D S R
Sbjct: 514 RIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLIDPNIVRGAHDHFSFSR 693
Query: 138 SKLG 127
S+LG
Sbjct: 694 SELG 705
Score = 179 bits (386), Expect = 1e-044
Identities = 93/181 (51%), Positives = 112/181 (61%)
Frame = +3 / -1
Query: 129 QVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTT 308
QV+S S* G GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q D T
Sbjct: 703 QVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWTK 524
Query: 309 GEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRL 488
GEF++ALHRP DV + L + +V + HN +RNGSA + PVPA H +G +L L
Sbjct: 523 GEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVLPEL 344
Query: 489 PR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGVSLLVQ 668
P+ AEE H VSPRQL V VRL VQV +RLRRLQ Q + PQGV LLVQ
Sbjct: 343 PQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGVGLLVQ 164
Query: 669 R 671
R
Sbjct: 163 R 161
Score = 126 bits (270), Expect(2) = 3e-031
Identities = 69/137 (50%), Positives = 83/137 (60%)
Frame = +2 / -3
Query: 128 PSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDH 307
PS L KL WS A R LGSI+T LA+*RARNC SR A Q IGR M A+R D
Sbjct: 704 PSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLDQ 525
Query: 308 RRIQSGFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKA 487
RRI++G TSS +GC T + S ++ S* +TEWIS+ STC T +G ST A
Sbjct: 524 RRIRTGSTSSHRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSGSTGA 345
Query: 488 TSLS*GKPSMTAPTWLA 538
TS S* +PS APT+ A
Sbjct: 344 TSAS*RRPSTVAPTFSA 294
Score = 71.2 bits (149), Expect(3) = 2e-032
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +3
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 162 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 284
Score = 70.7 bits (148), Expect(3) = 2e-032
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / +3
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 342 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 521
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 522 PLVQSACHFSQRHR*PANRL 581
Score = 35.4 bits (71), Expect(3) = 2e-032
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -2 / +3
Query: 196 CID*SQCNPLSP*PT*LAPE*TWGS 122
C D*SQ +P SP*P *L E*TW +
Sbjct: 636 CTD*SQYSPRSP*PF*LQQE*TWAT 710
Score = 28.6 bits (56), Expect(2) = 3e-031
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -3
Query: 641 TPRRQPTGSETCSRNTY 691
TPRR+PTGSET Y
Sbjct: 191 TPRRRPTGSETFCDTEY 141
>gb|BJ468501.1|BJ468501 BJ468501 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39b11 3', mRNA sequence
Length = 688
Score = 381 bits (826), Expect = e-105
Identities = 147/185 (79%), Positives = 164/185 (88%)
Frame = +1 / -1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFTP +AK+V GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGKPIGP
Sbjct: 688 PKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGP 509
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+FY+
Sbjct: 508 KANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRS 329
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKASAYWF 666
YL+EL+KAID GA+V GYFAWSLLDNFEW SGY+SKFGIVYVDF++P L+RHPKASAYWF
Sbjct: 328 YLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKASAYWF 149
Query: 667 RDMLQ 681
RD+L+
Sbjct: 148 RDLLR 134
Score = 291 bits (629), Expect = 5e-078
Identities = 138/181 (76%), Positives = 144/181 (79%)
Frame = -1 / +3
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 144 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 323
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 324 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 503
Query: 311 ACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVN 132
A GPIGLPF SK TCQSAE*LVG C S+FWPF LAVY*LIP+*SAEP+T LA +GVN
Sbjct: 504 AFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIPI*SAEPMTILASAGVN 683
Query: 131 L 129
L
Sbjct: 684 L 686
Score = 229 bits (494), Expect = 2e-059
Identities = 104/184 (56%), Positives = 131/184 (71%)
Frame = -3 / +2
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 137 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 316
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 317 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 496
Query: 318 *IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLR 139
IRLWS+R A+ I NLPI *+A R LL+QFLALH AS VLIDPN++R A D S R
Sbjct: 497 RIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLIDPNIVRGAHDHFSFSR 676
Query: 138 SKLG 127
S+LG
Sbjct: 677 SELG 688
Score = 179 bits (386), Expect = 1e-044
Identities = 93/181 (51%), Positives = 112/181 (61%)
Frame = +3 / -3
Query: 129 QVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTT 308
QV+S S* G GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q D T
Sbjct: 686 QVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWTK 507
Query: 309 GEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRL 488
GEF++ALHRP DV + L + +V + HN +RNGSA + PVPA H +G +L L
Sbjct: 506 GEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVLPEL 327
Query: 489 PR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGVSLLVQ 668
P+ AEE H VSPRQL V VRL VQV +RLRRLQ Q + PQGV LLVQ
Sbjct: 326 PQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGVGLLVQ 147
Query: 669 R 671
R
Sbjct: 146 R 144
Score = 126 bits (270), Expect(2) = 3e-031
Identities = 69/137 (50%), Positives = 83/137 (60%)
Frame = +2 / -2
Query: 128 PSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDH 307
PS L KL WS A R LGSI+T LA+*RARNC SR A Q IGR M A+R D
Sbjct: 687 PSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLDQ 508
Query: 308 RRIQSGFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKA 487
RRI++G TSS +GC T + S ++ S* +TEWIS+ STC T +G ST A
Sbjct: 507 RRIRTGSTSSHRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSGSTGA 328
Query: 488 TSLS*GKPSMTAPTWLA 538
TS S* +PS APT+ A
Sbjct: 327 TSAS*RRPSTVAPTFSA 277
Score = 71.2 bits (149), Expect(3) = 2e-032
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +1
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 145 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 267
Score = 70.7 bits (148), Expect(3) = 2e-032
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / +1
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 325 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 504
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 505 PLVQSACHFSQRHR*PANRL 564
Score = 35.0 bits (70), Expect(3) = 2e-032
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / +1
Query: 196 CID*SQCNPLSP*PT*LAPE*TW 128
C D*SQ +P SP*P *L E*TW
Sbjct: 619 CTD*SQYSPRSP*PF*LQQE*TW 687
Score = 28.6 bits (56), Expect(2) = 3e-031
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -2
Query: 641 TPRRQPTGSETCSRNTY 691
TPRR+PTGSET Y
Sbjct: 174 TPRRRPTGSETFCDTEY 124
>gb|BF261097.2|BF261097 HVSMEf0023M01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023M01f, mRNA sequence
Length = 751
Score = 310 bits (672), Expect(3) = e-104
Identities = 122/157 (77%), Positives = 133/157 (84%)
Frame = +1 / +2
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K PKFTP +AK+V GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGK
Sbjct: 281 KERLPKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGK 460
Query: 295 PIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQ 474
PIGP+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQ G LTR QYL DTTRV+
Sbjct: 461 PIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQXGGLTRDQYLRDTTRVR 640
Query: 475 FYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGY 585
FY+ YL+EL+KAID GA+V GYFAWSLLDNFEW SGY
Sbjct: 641 FYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGY 751
Score = 237 bits (511), Expect(3) = 5e-075
Identities = 114/157 (72%), Positives = 118/157 (75%)
Frame = -1 / -2
Query: 584 *PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYWPRVKFPG*SIPFS 405
*PD HSKLSRRD AK*P T AP SMAF SS R* *N TLVVS RYW RV P *SIPFS
Sbjct: 750 *PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSRRYWSRVSPPX*SIPFS 571
Query: 404 VMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*TCQSAE*LVGFCWS 225
VM GFPY R* T PYIP GTM*S FEFA GPIGLPF SK TCQSAE*LVG C S
Sbjct: 570 VMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCS 391
Query: 224 SFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLGQPLF 114
+FWPF LAVY*LIP+*SAEP+T LA +GVNLG F
Sbjct: 390 NFWPFMRLAVY*LIPI*SAEPMTILASAGVNLGNLSF 280
Score = 181 bits (389), Expect(3) = 4e-057
Identities = 81/149 (54%), Positives = 104/149 (69%)
Frame = -3 / -1
Query: 573 PLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYEN 394
P +VVE+RP EVA +VGA +DG QL+EVA VE P V QVL + LIHSV Y++
Sbjct: 739 PFKVVEKRPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVAREPPGLIHSVFSYDD 560
Query: 393 CWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLA 214
+ +L+ ++VH +HP WDDV+P+ IRLWS+R A+ I NLPI *+A R LL+QFLA
Sbjct: 559 RRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLA 380
Query: 213 LHVASGVLIDPNVIR*ALDQLSLLRSKLG 127
LH AS VLIDPN++R A D S RS+LG
Sbjct: 379 LHEASCVLIDPNIVRGAHDHFSFSRSELG 293
Score = 138 bits (297), Expect(3) = 3e-044
Identities = 72/157 (45%), Positives = 92/157 (58%)
Frame = +3 / +1
Query: 114 KERLPQVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQ 293
+ + QV+S S* G GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q
Sbjct: 280 EREVAQVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQ 459
Query: 294 TDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGA 473
D T GEF++ALHRP DV + L + +V + HN +RNGS R + PVPA H +G
Sbjct: 460 ADWTKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSXRGAHARPVPAGHDEGP 639
Query: 474 ILQRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRL 584
+L LP+ AEE H VS RQL + VRL
Sbjct: 640 VLPELPQRAEEGHRRWRQRSRLLRVVSSRQL*MDVRL 750
Score = 124 bits (266), Expect(3) = 2e-036
Identities = 68/141 (48%), Positives = 82/141 (58%)
Frame = +2 / +3
Query: 116 REAAPSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTAN 295
+ PS L KL WS A R LGSI+T LA+*RARNC SR A Q IGR M A+
Sbjct: 282 KRGCPSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMAS 461
Query: 296 RSDHRRIQSGFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCN 475
R D RRI++G TSS +GC T + S ++ S* +TEWI STC T +G
Sbjct: 462 RLDQRRIRTGSTSSHRGCMGACTTSARSTGTRRSS*LKTEWIXPGGSRATSTCGTRRGSG 641
Query: 476 STKATSLS*GKPSMTAPTWLA 538
ST ATS S* +PS APT+ A
Sbjct: 642 STGATSAS*RRPSTVAPTFSA 704
Score = 60.6 bits (126), Expect(3) = e-104
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +2 / +2
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NSTEDQAAAQRARDFHVGWF DPL
Sbjct: 170 NSTEDQAAAQRARDFHVGWFVDPL 241
Score = 46.9 bits (96), Expect(3) = e-104
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +2
Query: 75 INGHYPQIMQDIVKERLPQ 131
INGHYPQIMQD+VKERLP+
Sbjct: 242 INGHYPQIMQDLVKERLPK 298
Score = 46.0 bits (94), Expect(3) = 5e-075
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1 / -1
Query: 131 LGQPLFHNILHYLWIMSIY 75
LGQPLFH +LHYLW+M +Y
Sbjct: 298 LGQPLFHKVLHYLWVMPVY 242
Score = 44.6 bits (91), Expect(3) = 3e-044
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / +1
Query: 1 KLNRRPSSGSKSKGFPCWLVC 63
+LN RPSS SKS+G PCWLVC
Sbjct: 169 QLN*RPSSSSKSQGLPCWLVC 231
Score = 42.3 bits (86), Expect(3) = 4e-057
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2 / -2
Query: 127 GSLSFTISCIICG*CPFI 74
G+LSFT SCIICG*CPFI
Sbjct: 294 GNLSFTRSCIICG*CPFI 241
Score = 37.7 bits (76), Expect(3) = 5e-075
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -3 / -2
Query: 72 NGSANQPTWKSXXXXXXAWSSVE 4
+GS NQPTWKS AWSSVE
Sbjct: 240 SGSTNQPTWKSLAL*AAAWSSVE 172
Score = 37.3 bits (75), Expect(3) = 4e-057
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / -1
Query: 67 ISKPTNMEIPCSLSRCLVFG*V 2
+ KP NME+P SLS CLVF *V
Sbjct: 235 VDKPANMEVPGSLSCCLVFS*V 170
Score = 34.5 bits (69), Expect(3) = 2e-036
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 3 TQPKTKQRLKEQGISMLVGL 62
TQ KTKQ+LKE G SML GL
Sbjct: 171 TQLKTKQQLKEPGTSMLAGL 230
Score = 33.6 bits (67), Expect(3) = 3e-044
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 85 IIHR*CKIL*KRGCP 129
I HR*CK L*KRGCP
Sbjct: 252 ITHR*CKTL*KRGCP 296
Score = 31.8 bits (63), Expect(3) = 2e-036
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2 / +1
Query: 68 PLNKWTLSTDNARYCEREAA 127
P +K L TDNAR CERE A
Sbjct: 235 PADKRALPTDNARPCEREVA 294
>gb|BQ469152.1|BQ469152 HM03J01r HM Hordeum vulgare subsp. vulgare cDNA clone HM03J01
5-PRIME, mRNA sequence
Length = 578
Score = 342 bits (741), Expect(2) = e-101
Identities = 134/169 (79%), Positives = 147/169 (86%)
Frame = +1 / +3
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K PKFTP +AK+VKGSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGK
Sbjct: 72 KERLPKFTPAEAKMVKGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGK 251
Query: 295 PIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQ 474
PIGP+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+
Sbjct: 252 PIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVR 431
Query: 475 FYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFS 621
FY+ YL+EL+KAID GA+V GYFAWSLLDNFEW SGY+SKFGIVYVDF+
Sbjct: 432 FYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFN 578
Score = 259 bits (561), Expect(2) = 4e-075
Identities = 125/169 (73%), Positives = 129/169 (76%)
Frame = -1 / -2
Query: 620 LKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYWP 441
LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS R* *N TLVVS RYW
Sbjct: 577 LKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSRRYWS 398
Query: 440 RVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*TC 261
RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEFA GPIGLPF SK TC
Sbjct: 397 RVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTC 218
Query: 260 QSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLGQPLF 114
QSAE*LVG C S+FWPF LAVY LIP+*SAEPLT LA +GVNLG F
Sbjct: 217 QSAE*LVGVCCSNFWPFMRLAVYWLIPI*SAEPLTILASAGVNLGNLSF 71
Score = 205 bits (442), Expect(2) = 9e-054
Identities = 92/164 (56%), Positives = 117/164 (71%)
Frame = -3 / -1
Query: 618 EVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQVLAT 439
EVDVDD++LGRV PL+VVEERP EVA +VGA +DG QL+EVA VE P V QVL
Sbjct: 575 EVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVA 396
Query: 438 SQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NILNLP 259
+ LIHSV Y++ + +L+ ++VH +HP WDDV+P+ IRLW +R A+ I NLP
Sbjct: 395 REPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWPNRLAISLKGIGNLP 216
Query: 258 IS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLRSKLG 127
I *+A R LL+QFLALH AS VL+DPN++R ALD S RS+LG
Sbjct: 215 IG*IAGRRLLQQFLALHEASCVLVDPNIVRGALDHFSFSRSELG 84
Score = 156 bits (336), Expect(2) = 1e-041
Identities = 82/169 (48%), Positives = 102/169 (60%)
Frame = +3 / +2
Query: 114 KERLPQVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQ 293
+ + QV+S S* GQGL GL+WDQ +H * EGPE A A+A L S LAG +C + Q
Sbjct: 71 EREVAQVHSC*S*NGQGLRGLYWDQPVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQ 250
Query: 294 TDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGA 473
D GEF++ALHRP DV + L + +V + HN +RNGSA + PVPA H +G
Sbjct: 251 ADWAKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGP 430
Query: 474 ILQRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQ 620
+L LP+ AEE H VSPRQL V VRL VQV +RLRRLQ
Sbjct: 431 VLPELPQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQ 577
Score = 125 bits (268), Expect(2) = 7e-032
Identities = 68/141 (48%), Positives = 83/141 (58%)
Frame = +2 / +1
Query: 116 REAAPSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTAN 295
+ PS L KL WSRA R LGS +T LA+*RARNC SR A Q IGR M A+
Sbjct: 73 KRGCPSSLLLKLKWSRAPRTILGSTSTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMAS 252
Query: 296 RSDHRRIQSGFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCN 475
R RRI++G TSS +GC T + S ++ S* +TEWIS+ STC T +G
Sbjct: 253 RLGQRRIRTGSTSSHRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSG 432
Query: 476 STKATSLS*GKPSMTAPTWLA 538
ST ATS S* +PS APT+ A
Sbjct: 433 STGATSAS*RRPSTVAPTFSA 495
Score = 68.9 bits (144), Expect(3) = 2e-027
Identities = 34/80 (42%), Positives = 45/80 (56%)
Frame = -2 / -3
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 447 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 268
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+ +S C +H PAN+L
Sbjct: 267 PLAQSACHFSQRHR*PANRL 208
Score = 47.3 bits (97), Expect(3) = 2e-027
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = -1 / -1
Query: 161 LTNLACSGVNLGQPLFHNILHYLWIMSIY 75
L + + S LGQPLFH +LHYLW+M +Y
Sbjct: 119 LDHFSFSRSELGQPLFHKVLHYLWVMPVY 33
Score = 46.9 bits (96), Expect(2) = e-101
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +3
Query: 75 INGHYPQIMQDIVKERLPQ 131
INGHYPQIMQD+VKERLP+
Sbjct: 33 INGHYPQIMQDLVKERLPK 89
Score = 43.7 bits (89), Expect(3) = 2e-027
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -2 / -3
Query: 619 *SRRRRFQTWTCNLTATRSCRGET 548
*SRRRR +TWT + T+T+SCRGET
Sbjct: 576 *SRRRRCRTWTSSRTSTQSCRGET 505
Score = 42.3 bits (86), Expect(2) = 4e-075
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2 / -2
Query: 127 GSLSFTISCIICG*CPFI 74
G+LSFT SCIICG*CPFI
Sbjct: 85 GNLSFTRSCIICG*CPFI 32
Score = 33.6 bits (67), Expect(2) = 1e-041
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 85 IIHR*CKIL*KRGCP 129
I HR*CK L*KRGCP
Sbjct: 43 ITHR*CKTL*KRGCP 87
Score = 31.8 bits (63), Expect(2) = 7e-032
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2 / +2
Query: 68 PLNKWTLSTDNARYCEREAA 127
P +K L TDNAR CERE A
Sbjct: 26 PADKRALPTDNARPCEREVA 85
Score = 25.4 bits (49), Expect(2) = 9e-054
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -3 / -3
Query: 126 AASLSQYLALSVDNVHLFNG 67
A SLSQ LALSV N L G
Sbjct: 84 ATSLSQGLALSVGNARLSAG 25
>gb|CB858437.1|CB858437 HI07A02w HI Hordeum vulgare subsp. vulgare cDNA clone HI07A02
3-PRIME, mRNA sequence
Length = 653
Score = 331 bits (718), Expect(3) = e-100
Identities = 128/172 (74%), Positives = 146/172 (84%)
Frame = +1 / -1
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K P FTPEQ+KLVKGS DYIGINQYTA+Y+ Q LQQ PTSYS+DW VQY+ +RNG
Sbjct: 614 KERLPSFTPEQSKLVKGSVDYIGINQYTATYMADQPTLQQPPTSYSSDWHVQYIFQRNGV 435
Query: 295 PIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQ 474
PIG +ANS WLYIVP GMYGCVNY++ KY NPT+ I+ENGMDQP NLTR ++LHD +RV+
Sbjct: 434 PIGQKANSNWLYIVPTGMYGCVNYIREKYNNPTIIISENGMDQPANLTREEFLHDASRVE 255
Query: 475 FYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
FYK YLAEL+KAIDDGA+V GYFAWSLLDNFEW SGYTSKFGIVYVDF+T K
Sbjct: 254 FYKTYLAELKKAIDDGANVVGYFAWSLLDNFEWLSGYTSKFGIVYVDFTTLK 99
Score = 242 bits (522), Expect(3) = 1e-067
Identities = 117/172 (68%), Positives = 125/172 (72%)
Frame = -1 / +1
Query: 629 LGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCR 450
L V+KST T+PNL+V*PD HSKLSRRDQAK*P T APSS+AF SSAR* L*N TL SCR
Sbjct: 100 LRVVKSTYTMPNLEV*PDSHSKLSRRDQAK*PTTFAPSSIAFFSSAR*VL*NSTLEASCR 279
Query: 449 YWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY 270
RV+F G*SIPFS + VG Y *FT PY+P GTM*S EFA PIG PFR Y
Sbjct: 280 NSSRVRFAG*SIPFSDIMIVGLLYFSLM*FTHPYMPVGTM*SQLEFAFCPIGTPFR*NIY 459
Query: 269 *TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLGQPLF 114
*TCQS E*LVG CWS W *+AVY* IPM*S EPLTNL CSGV LG F
Sbjct: 460 *TCQSDE*LVGGCWSVGWSAM*VAVY*FIPM*STEPLTNLDCSGVKLGNLSF 615
Score = 186 bits (400), Expect(3) = 4e-047
Identities = 88/160 (55%), Positives = 108/160 (67%)
Frame = -3 / +3
Query: 618 EVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQVLAT 439
EVDV D++LG V PLEVVEE P EVA HV AV+D QL EV VEL P GVVQ L
Sbjct: 111 EVDVHDAELGGVARQPLEVVEEGPGEVADHVRAVVDRLLQLGEVGLVELDPRGVVQELLA 290
Query: 438 SQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NILNLP 259
QV LIHSV GY + + +L+ +VHT++H WDDVKP+ +RL S+R+A+ ILN+P
Sbjct: 291 GQVRGLIHSVFGYNDRRVVVLLPYVVHTSIHACWDDVKPIGVRLLSNRYAISLKYILNMP 470
Query: 258 IS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLR 139
+ *VA LLE++L HV +LI PNVI ALDQL L R
Sbjct: 471 VR*VACWWLLERWLVCHVGRCILIYPNVIYRALDQLRLFR 590
Score = 158 bits (339), Expect(3) = 6e-042
Identities = 79/161 (49%), Positives = 99/161 (61%)
Frame = +3 / -3
Query: 150 *VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTTGEFKVAL 329
*VGQGL LHWD+S++ L P APA LL *LA SI + +TD T GE ++AL
Sbjct: 579 *VGQGLCRLHWDKSVYSDLHGRPTNAPATTNKLLI*LACSIYISAKWRTDWTEGELQLAL 400
Query: 330 HRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRLPR*AEES 509
HRP R V +CEL + +V + + + R+RNGS R+ D VPAR +G +LQ LPR AEE
Sbjct: 399 HRPNRHVWMCELHKGEVQQPDDHYIRKRNGSTREPDPRGVPARRLEGRVLQDLPRRAEEG 220
Query: 510 HXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQA 632
V PRQLRVAV LH+QV +R+RRL H QA
Sbjct: 219 DRRRRERGRLLRLVPPRQLRVAVGLHLQVRHRVRRLHHPQA 97
Score = 116 bits (249), Expect(2) = 8e-027
Identities = 62/132 (46%), Positives = 78/132 (59%)
Frame = +2 / -2
Query: 143 SKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDHRRIQS 322
+ LSWSRA ITLG I+ T + SS AT L G FN++ + A R D RR
Sbjct: 586 NNLSWSRAL*ITLG*ISIQRPTWQTNQRSSNHQQATHLTGMFNIYFSEMAYRLDRRRTPI 407
Query: 323 GFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKATSLS* 502
GFTSSQ+ C V*T * S ++ P+TEWI+ T* S+CTTP+G +ST+ TS S*
Sbjct: 406 GFTSSQQACMDV*TT*GRSTTTRRSLYPKTEWINPRT*PARSSCTTPRGSSSTRPTSPS* 227
Query: 503 GKPSMTAPTWLA 538
+ S TA TW A
Sbjct: 226 RRRSTTARTWSA 191
Score = 38.6 bits (78), Expect(3) = e-100
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3 / -1
Query: 75 INGHYPQIMQDIVKERLP 128
+NG YP+ MQDIVKERLP
Sbjct: 653 LNGQYPKTMQDIVKERLP 600
Score = 35.4 bits (71), Expect(3) = e-100
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +1 / -1
Query: 631 LERHPKASAYWFRDMLQ 681
L+R+PK SAYWF++MLQ
Sbjct: 104 LKRYPKDSAYWFKNMLQ 54
Score = 28.6 bits (56), Expect(3) = 1e-067
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2 / +1
Query: 127 GSLSFTISCIICG*CPF 77
G+LSFTISC++ G PF
Sbjct: 601 GNLSFTISCMVFGY*PF 651
Score = 25.8 bits (50), Expect(3) = 6e-042
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2 / -3
Query: 77 KWTLSTDNARYCERE 121
KW++ D+ARY +RE
Sbjct: 651 KWSIPEDHARYSKRE 607
Score = 25.4 bits (49), Expect(3) = 6e-042
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / -2
Query: 641 TPRRQPTGSETCSR 682
T R +PTGS TC R
Sbjct: 94 TQRTRPTGSRTCCR 53
Score = 25.4 bits (49), Expect(3) = 1e-067
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3 / +3
Query: 681 LEHVSEPVG*RLGVSFELGRAEV 613
L+HV EPVG L V E G +V
Sbjct: 54 LQHVLEPVGRVLWVPLEGGEVDV 122
Score = 23.5 bits (45), Expect(2) = 8e-027
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3 / -3
Query: 633 RTTPQGVSLLVQRHA 677
+ P+G+ LLVQ HA
Sbjct: 102 QAVPKGLGLLVQEHA 58
Score = 22.1 bits (42), Expect(3) = 4e-047
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2 / +2
Query: 676 ACL*TSRLTPWGVVRAW 626
AC *TSR +P G W
Sbjct: 59 ACS*TSRPSPLGTA*GW 109
Score = 21.7 bits (41), Expect(3) = 4e-047
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1 / +3
Query: 122 PLFHNILHYLWIMSI 78
PLF+ ILH L +++I
Sbjct: 606 PLFYYILHGLRVLTI 650
>gb|AV919161.1|AV919161 AV919161 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4m17 3', mRNA sequence
Length = 714
Score = 286 bits (619), Expect(2) = e-100
Identities = 108/140 (77%), Positives = 123/140 (87%)
Frame = +1 / -3
Query: 262 QVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTR 441
+V Y ERNGKPIGP+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG LTR
Sbjct: 574 RVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTR 395
Query: 442 GQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFS 621
QYL DTTRV+FY+ YL+EL+KAID GA+V GYFAWSLLDNFEW SGY+SKFGIVYVDF+
Sbjct: 394 DQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFN 215
Query: 622 TPKLERHPKASAYWFRDMLQ 681
+P L+RHPKASAYWFRD+L+
Sbjct: 214 SPNLDRHPKASAYWFRDLLR 155
Score = 215 bits (465), Expect(2) = 3e-074
Identities = 102/132 (77%), Positives = 104/132 (78%)
Frame = -1 / +3
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 165 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 344
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 345 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 524
Query: 311 ACGPIGLPFRSK 276
A GPIGLPF SK
Sbjct: 525 AFGPIGLPFLSK 560
Score = 166 bits (357), Expect(2) = 3e-054
Identities = 74/138 (53%), Positives = 96/138 (69%)
Frame = -3 / +2
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 158 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 337
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 338 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 517
Query: 318 *IRLWSDRFAVPF*NILN 265
IRLWS+R A+ I N
Sbjct: 518 RIRLWSNRLAISLKGIGN 571
Score = 128 bits (275), Expect(2) = 1e-040
Identities = 66/136 (48%), Positives = 81/136 (59%)
Frame = +3 / -2
Query: 264 GSICFRTERQTDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSW 443
G +C + Q D T GEF++ALHRP DV + L + +V + HN +RNGSA +
Sbjct: 572 GYLCL*EKWQADWTKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHAR 393
Query: 444 PVPARHHKGAILQRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQH 623
PVPA H +G +L LP+ AEE H VSPRQL V VRL VQV +RLRRLQ
Sbjct: 392 PVPAGHDEGPVLPELPQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 213
Query: 624 AQARTTPQGVSLLVQR 671
Q + PQGV LLVQR
Sbjct: 212 PQPGSAPQGVGLLVQR 165
Score = 98.2 bits (208), Expect(2) = e-100
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +1 / -2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQ 264
PKFTP +AK+V GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQ
Sbjct: 710 PKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQ 573
Score = 83.5 bits (176), Expect(2) = 3e-074
Identities = 38/54 (70%), Positives = 43/54 (79%)
Frame = -1 / +1
Query: 287 FRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLG 126
F + * CQSAE*LVG C S+FWPF LAVY*LIP+*SAEP+T LA +GVNLG
Sbjct: 550 FSQRHR*PCQSAE*LVGVCCSNFWPFMRLAVY*LIPI*SAEPMTILASAGVNLG 711
Score = 75.3 bits (158), Expect(3) = 2e-027
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = +2 / -1
Query: 290 ANRSDHRRIQSGFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQG 469
A+R D RRI++G TSS +GC T + S ++ S* +TEWIS+ STC T +G
Sbjct: 546 ASRLDQRRIRTGSTSSHRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRG 367
Query: 470 CNSTKATSLS*GKPSMTAPTWLA 538
ST ATS S* +PS APT+ A
Sbjct: 366 SGSTGATSAS*RRPSTVAPTFSA 298
Score = 71.2 bits (149), Expect(3) = 3e-030
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +1
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 166 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 288
Score = 66.1 bits (138), Expect(2) = 3e-054
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = -3 / +3
Query: 270 LNLPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLRSKLG 127
+ LPI *+A R LL+QFLALH AS VLIDPN++R A D S RS+LG
Sbjct: 567 VTLPIG*IAGRRLLQQFLALHEASCVLIDPNIVRGAHDHFSFSRSELG 710
Score = 63.8 bits (133), Expect(3) = 3e-030
Identities = 31/73 (42%), Positives = 41/73 (56%)
Frame = -2 / +1
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 346 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 525
Query: 310 PVVRSVCRSVLKH 272
P+V+S C +H
Sbjct: 526 PLVQSACHFSQRH 564
Score = 57.9 bits (120), Expect(2) = 1e-040
Identities = 29/46 (63%), Positives = 31/46 (67%)
Frame = +2 / -3
Query: 128 PSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGR 265
PS L KL WS A R LGSI+T LA+*RARNC SR A Q IGR
Sbjct: 709 PSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGR 572
Score = 56.5 bits (117), Expect(3) = 2e-027
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = +3 / -1
Query: 129 QVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAG 266
QV+S S* G GL GL+WDQS+H * EGPE A A+A L S LAG
Sbjct: 708 QVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAG 571
Score = 35.0 bits (70), Expect(3) = 3e-030
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / +2
Query: 196 CID*SQCNPLSP*PT*LAPE*TW 128
C D*SQ +P SP*P *L E*TW
Sbjct: 641 CTD*SQYSPRSP*PF*LQQE*TW 709
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -1
Query: 641 TPRRQPTGSETCSRNTY 691
TPRR+PTGSET Y
Sbjct: 195 TPRRRPTGSETFCDTEY 145
>gb|AV918128.1|AV918128 AV918128 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17p13 3', mRNA sequence
Length = 684
Score = 362 bits (784), Expect = 2e-099
Identities = 140/175 (80%), Positives = 155/175 (88%)
Frame = +1 / -1
Query: 157 VKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIV 336
V GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGKPIGP+ANS WLYIV
Sbjct: 684 VMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGPKANSNWLYIV 505
Query: 337 PEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAID 516
P GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+FY+ YL+EL+KAID
Sbjct: 504 PSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKAID 325
Query: 517 DGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKASAYWFRDMLQ 681
GA+V GYFAWSLLDNFEW SGY+SKFGIVYVDF++P L+RHPKASAYWFRD+L+
Sbjct: 324 GGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKASAYWFRDLLR 160
Score = 277 bits (599), Expect = 6e-074
Identities = 131/171 (76%), Positives = 136/171 (79%)
Frame = -1 / +2
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 170 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 349
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 350 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 529
Query: 311 ACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPL 159
A GPIGLPF SK TCQSAE*LVG C S+FWPF LAVY*LIP+*SAEP+
Sbjct: 530 AFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIPI*SAEPM 682
Score = 219 bits (472), Expect = 2e-056
Identities = 99/174 (56%), Positives = 125/174 (71%)
Frame = -3 / +1
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 163 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 342
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 343 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 522
Query: 318 *IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALD 157
IRLWS+R A+ I NLPI *+A R LL+QFLALH AS VLIDPN++R A D
Sbjct: 523 RIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLIDPNIVRGAHD 684
Score = 172 bits (370), Expect = 2e-042
Identities = 87/170 (51%), Positives = 105/170 (61%)
Frame = +3 / -3
Query: 162 GLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTTGEFKVALHRPR 341
GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q D T GEF++ALHRP
Sbjct: 679 GLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWTKGEFELALHRPI 500
Query: 342 RDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRLPR*AEESHXXX 521
DV + L + +V + HN +RNGSA + PVPA H +G +L LP+ AEE H
Sbjct: 499 GDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVLPELPQRAEEGHRRW 320
Query: 522 XXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGVSLLVQR 671
VSPRQL V VRL VQV +RLRRLQ Q + PQGV LLVQR
Sbjct: 319 RQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGVGLLVQR 170
Score = 113 bits (241), Expect(2) = 3e-027
Identities = 63/127 (49%), Positives = 77/127 (60%)
Frame = +2 / -2
Query: 158 SRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDHRRIQSGFTSS 337
S A R LGSI+T LA+*RARNC SR A Q IGR M A+R D RRI++G TSS
Sbjct: 683 SWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLDQRRIRTGSTSS 504
Query: 338 QKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKATSLS*GKPSM 517
+GC T + S ++ S* +TEWIS+ STC T +G ST ATS S* +PS
Sbjct: 503 HRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSGSTGATSAS*RRPST 324
Query: 518 TAPTWLA 538
APT+ A
Sbjct: 323 VAPTFSA 303
Score = 71.2 bits (149), Expect(2) = 3e-027
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +3
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 171 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 293
Score = 70.7 bits (148), Expect(2) = 3e-027
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / +3
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 351 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 530
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 531 PLVQSACHFSQRHR*PANRL 590
Score = 28.6 bits (56), Expect(2) = 3e-027
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -2
Query: 641 TPRRQPTGSETCSRNTY 691
TPRR+PTGSET Y
Sbjct: 200 TPRRRPTGSETFCDTEY 150
>gb|BJ466393.1|BJ466393 BJ466393 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31o15 3', mRNA sequence
Length = 653
Score = 362 bits (784), Expect = 2e-099
Identities = 140/175 (80%), Positives = 155/175 (88%)
Frame = +1 / -1
Query: 157 VKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIV 336
V GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGKPIGP+ANS WLYIV
Sbjct: 653 VMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGPKANSNWLYIV 474
Query: 337 PEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAID 516
P GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+FY+ YL+EL+KAID
Sbjct: 473 PSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKAID 294
Query: 517 DGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKASAYWFRDMLQ 681
GA+V GYFAWSLLDNFEW SGY+SKFGIVYVDF++P L+RHPKASAYWFRD+L+
Sbjct: 293 GGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKASAYWFRDLLR 129
Score = 277 bits (599), Expect = 6e-074
Identities = 131/171 (76%), Positives = 136/171 (79%)
Frame = -1 / +1
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 139 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 318
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 319 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 498
Query: 311 ACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPL 159
A GPIGLPF SK TCQSAE*LVG C S+FWPF LAVY*LIP+*SAEP+
Sbjct: 499 AFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIPI*SAEPM 651
Score = 219 bits (472), Expect = 2e-056
Identities = 99/174 (56%), Positives = 125/174 (71%)
Frame = -3 / +3
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 132 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 311
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 312 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 491
Query: 318 *IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALD 157
IRLWS+R A+ I NLPI *+A R LL+QFLALH AS VLIDPN++R A D
Sbjct: 492 RIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLIDPNIVRGAHD 653
Score = 172 bits (370), Expect = 2e-042
Identities = 87/170 (51%), Positives = 105/170 (61%)
Frame = +3 / -3
Query: 162 GLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTTGEFKVALHRPR 341
GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q D T GEF++ALHRP
Sbjct: 648 GLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWTKGEFELALHRPI 469
Query: 342 RDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRLPR*AEESHXXX 521
DV + L + +V + HN +RNGSA + PVPA H +G +L LP+ AEE H
Sbjct: 468 GDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVLPELPQRAEEGHRRW 289
Query: 522 XXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGVSLLVQR 671
VSPRQL V VRL VQV +RLRRLQ Q + PQGV LLVQR
Sbjct: 288 RQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGVGLLVQR 139
Score = 113 bits (241), Expect(2) = 3e-027
Identities = 63/127 (49%), Positives = 77/127 (60%)
Frame = +2 / -2
Query: 158 SRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDHRRIQSGFTSS 337
S A R LGSI+T LA+*RARNC SR A Q IGR M A+R D RRI++G TSS
Sbjct: 652 SWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLDQRRIRTGSTSS 473
Query: 338 QKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKATSLS*GKPSM 517
+GC T + S ++ S* +TEWIS+ STC T +G ST ATS S* +PS
Sbjct: 472 HRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSGSTGATSAS*RRPST 293
Query: 518 TAPTWLA 538
APT+ A
Sbjct: 292 VAPTFSA 272
Score = 71.2 bits (149), Expect(2) = 3e-027
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +2
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 140 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 262
Score = 70.7 bits (148), Expect(2) = 3e-027
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / +2
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 320 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 499
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 500 PLVQSACHFSQRHR*PANRL 559
Score = 28.6 bits (56), Expect(2) = 3e-027
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -2
Query: 641 TPRRQPTGSETCSRNTY 691
TPRR+PTGSET Y
Sbjct: 169 TPRRRPTGSETFCDTEY 119
>gb|AV917579.1|AV917579 AV917579 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10i17 3', mRNA sequence
Length = 688
Score = 360 bits (781), Expect = 5e-099
Identities = 139/173 (80%), Positives = 154/173 (89%)
Frame = +1 / -3
Query: 163 GSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPE 342
GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGKPIGP+ANS WLYIVP
Sbjct: 683 GSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGPKANSNWLYIVPS 504
Query: 343 GMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDG 522
GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+FY+ YL+EL+KAID G
Sbjct: 503 GMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKAIDGG 324
Query: 523 ADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKASAYWFRDMLQ 681
A+V GYFAWSLLDNFEW SGY+SKFGIVYVDF++P L+RHPKASAYWFRD+L+
Sbjct: 323 ANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKASAYWFRDLLR 165
Score = 277 bits (599), Expect = 6e-074
Identities = 131/171 (76%), Positives = 136/171 (79%)
Frame = -1 / +1
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 175 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 354
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 355 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 534
Query: 311 ACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPL 159
A GPIGLPF SK TCQSAE*LVG C S+FWPF LAVY*LIP+*SAEP+
Sbjct: 535 AFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIPI*SAEPM 687
Score = 217 bits (469), Expect = 5e-056
Identities = 97/170 (57%), Positives = 123/170 (72%)
Frame = -3 / +3
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 168 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 347
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 348 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 527
Query: 318 *IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLIDPNVIR 169
IRLWS+R A+ I NLPI *+A R LL+QFLALH AS VLIDPN++R
Sbjct: 528 RIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLIDPNIVR 677
Score = 172 bits (370), Expect = 2e-042
Identities = 87/170 (51%), Positives = 105/170 (61%)
Frame = +3 / -2
Query: 162 GLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTTGEFKVALHRPR 341
GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q D T GEF++ALHRP
Sbjct: 684 GLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWTKGEFELALHRPI 505
Query: 342 RDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRLPR*AEESHXXX 521
DV + L + +V + HN +RNGSA + PVPA H +G +L LP+ AEE H
Sbjct: 504 GDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVLPELPQRAEEGHRRW 325
Query: 522 XXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGVSLLVQR 671
VSPRQL V VRL VQV +RLRRLQ Q + PQGV LLVQR
Sbjct: 324 RQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGVGLLVQR 175
Score = 113 bits (241), Expect(2) = 3e-027
Identities = 63/127 (49%), Positives = 77/127 (60%)
Frame = +2 / -1
Query: 158 SRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDHRRIQSGFTSS 337
S A R LGSI+T LA+*RARNC SR A Q IGR M A+R D RRI++G TSS
Sbjct: 688 SWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLDQRRIRTGSTSS 509
Query: 338 QKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKATSLS*GKPSM 517
+GC T + S ++ S* +TEWIS+ STC T +G ST ATS S* +PS
Sbjct: 508 HRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSGSTGATSAS*RRPST 329
Query: 518 TAPTWLA 538
APT+ A
Sbjct: 328 VAPTFSA 308
Score = 71.2 bits (149), Expect(2) = 3e-027
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +2
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 176 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 298
Score = 70.7 bits (148), Expect(2) = 3e-027
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / +2
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 356 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 535
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 536 PLVQSACHFSQRHR*PANRL 595
Score = 28.6 bits (56), Expect(2) = 3e-027
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -1
Query: 641 TPRRQPTGSETCSRNTY 691
TPRR+PTGSET Y
Sbjct: 205 TPRRRPTGSETFCDTEY 155
>gb|BJ462494.1|BJ462494 BJ462494 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags28l23 5', mRNA sequence
Length = 610
Score = 331 bits (718), Expect(2) = 1e-095
Identities = 128/172 (74%), Positives = 146/172 (84%)
Frame = +1 / +1
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K P FTPEQ+KLVKGS DYIGINQYTA+Y+ Q LQQ PTSYS+DW VQY+ +RNG
Sbjct: 73 KERLPSFTPEQSKLVKGSVDYIGINQYTATYMADQPTLQQPPTSYSSDWHVQYIFQRNGV 252
Query: 295 PIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQ 474
PIG +ANS WLYIVP GMYGCVNY++ KY NPT+ I+ENGMDQP NLTR ++LHD +RV+
Sbjct: 253 PIGQKANSNWLYIVPTGMYGCVNYIREKYNNPTIIISENGMDQPANLTREEFLHDASRVE 432
Query: 475 FYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
FYK YLAEL+KAIDDGA+V GYFAWSLLDNFEW SGYTSKFGIVYVDF+T K
Sbjct: 433 FYKTYLAELKKAIDDGANVVGYFAWSLLDNFEWLSGYTSKFGIVYVDFTTLK 588
Score = 242 bits (522), Expect(2) = 1e-065
Identities = 117/172 (68%), Positives = 125/172 (72%)
Frame = -1 / -3
Query: 629 LGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCR 450
L V+KST T+PNL+V*PD HSKLSRRDQAK*P T APSS+AF SSAR* L*N TL SCR
Sbjct: 587 LRVVKSTYTMPNLEV*PDSHSKLSRRDQAK*PTTFAPSSIAFFSSAR*VL*NSTLEASCR 408
Query: 449 YWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY 270
RV+F G*SIPFS + VG Y *FT PY+P GTM*S EFA PIG PFR Y
Sbjct: 407 NSSRVRFAG*SIPFSDIMIVGLLYFSLM*FTHPYMPVGTM*SQLEFAFCPIGTPFR*NIY 228
Query: 269 *TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLGQPLF 114
*TCQS E*LVG CWS W *+AVY* IPM*S EPLTNL CSGV LG F
Sbjct: 227 *TCQSDE*LVGGCWSVGWSAM*VAVY*FIPM*STEPLTNLDCSGVKLGNLSF 72
Score = 186 bits (400), Expect = 2e-046
Identities = 88/160 (55%), Positives = 108/160 (67%)
Frame = -3 / -2
Query: 618 EVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQVLAT 439
EVDV D++LG V PLEVVEE P EVA HV AV+D QL EV VEL P GVVQ L
Sbjct: 576 EVDVHDAELGGVARQPLEVVEEGPGEVADHVRAVVDRLLQLGEVGLVELDPRGVVQELLA 397
Query: 438 SQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NILNLP 259
QV LIHSV GY + + +L+ +VHT++H WDDVKP+ +RL S+R+A+ ILN+P
Sbjct: 396 GQVRGLIHSVFGYNDRRVVVLLPYVVHTSIHACWDDVKPIGVRLLSNRYAISLKYILNMP 217
Query: 258 IS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLR 139
+ *VA LLE++L HV +LI PNVI ALDQL L R
Sbjct: 216 VR*VACWWLLERWLVCHVGRCILIYPNVIYRALDQLRLFR 97
Score = 158 bits (339), Expect(2) = 8e-040
Identities = 79/161 (49%), Positives = 99/161 (61%)
Frame = +3 / +3
Query: 150 *VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTTGEFKVAL 329
*VGQGL LHWD+S++ L P APA LL *LA SI + +TD T GE ++AL
Sbjct: 108 *VGQGLCRLHWDKSVYSDLHGRPTNAPATTNKLLI*LACSIYISAKWRTDWTEGELQLAL 287
Query: 330 HRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRLPR*AEES 509
HRP R V +CEL + +V + + + R+RNGS R+ D VPAR +G +LQ LPR AEE
Sbjct: 288 HRPNRHVWMCELHKGEVQQPDDHYIRKRNGSTREPDPRGVPARRLEGRVLQDLPRRAEEG 467
Query: 510 HXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQA 632
V PRQLRVAV LH+QV +R+RRL H QA
Sbjct: 468 DRRRRERGRLLRLVPPRQLRVAVGLHLQVRHRVRRLHHPQA 590
Score = 116 bits (249), Expect = 1e-025
Identities = 62/132 (46%), Positives = 78/132 (59%)
Frame = +2 / +2
Query: 143 SKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDHRRIQS 322
+ LSWSRA ITLG I+ T + SS AT L G FN++ + A R D RR
Sbjct: 101 NNLSWSRAL*ITLG*ISIQRPTWQTNQRSSNHQQATHLTGMFNIYFSEMAYRLDRRRTPI 280
Query: 323 GFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKATSLS* 502
GFTSSQ+ C V*T * S ++ P+TEWI+ T* S+CTTP+G +ST+ TS S*
Sbjct: 281 GFTSSQQACMDV*TT*GRSTTTRRSLYPKTEWINPRT*PARSSCTTPRGSSSTRPTSPS* 460
Query: 503 GKPSMTAPTWLA 538
+ S TA TW A
Sbjct: 461 RRRSTTARTWSA 496
Score = 38.6 bits (78), Expect(2) = 1e-095
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 75 INGHYPQIMQDIVKERLP 128
+NG YP+ MQDIVKERLP
Sbjct: 34 LNGQYPKTMQDIVKERLP 87
Score = 28.6 bits (56), Expect(2) = 1e-065
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2 / -3
Query: 127 GSLSFTISCIICG*CPF 77
G+LSFTISC++ G PF
Sbjct: 86 GNLSFTISCMVFGY*PF 36
Score = 25.8 bits (50), Expect(2) = 8e-040
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2 / +3
Query: 77 KWTLSTDNARYCERE 121
KW++ D+ARY +RE
Sbjct: 36 KWSIPEDHARYSKRE 80
>gb|BJ465763.1|BJ465763 BJ465763 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27d04 3', mRNA sequence
Length = 632
Score = 343 bits (744), Expect = 6e-094
Identities = 132/166 (79%), Positives = 147/166 (88%)
Frame = +1 / -2
Query: 184 INQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVN 363
INQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGKPIGP+ANS WLYIVP GMYGCV+
Sbjct: 631 INQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVH 452
Query: 364 YLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYF 543
YL KYGNP + ITENGMDQPG LTR QYL DTTRV+FY+ YL+EL+KAID GA+V GYF
Sbjct: 451 YLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYF 272
Query: 544 AWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKASAYWFRDMLQ 681
AWSLLDNFEW SGY+SKFGIVYVDF++P L+RHPKASAYWFRD+L+
Sbjct: 271 AWSLLDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKASAYWFRDLLR 134
Score = 263 bits (568), Expect = 1e-069
Identities = 125/163 (76%), Positives = 128/163 (78%)
Frame = -1 / +3
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 144 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 323
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 324 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 503
Query: 311 ACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LI 183
A GPIGLPF SK TCQSAE*LVG C S+FWPF LAVY*LI
Sbjct: 504 AFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LI 632
Score = 206 bits (445), Expect = 1e-052
Identities = 94/165 (56%), Positives = 118/165 (71%)
Frame = -3 / +2
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 137 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 316
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 317 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 496
Query: 318 *IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLID 184
IRLWS+R A+ I NLPI *+A R LL+QFLALH AS VLID
Sbjct: 497 RIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLID 631
Score = 157 bits (338), Expect = 6e-038
Identities = 82/163 (50%), Positives = 99/163 (60%)
Frame = +3 / -1
Query: 183 DQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTTGEFKVALHRPRRDVRLCE 362
DQS+H * EGPE A A+A L S LAG +C + Q D T GEF++ALHRP DV +
Sbjct: 632 DQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWTKGEFELALHRPIGDVWVRA 453
Query: 363 LSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRLPR*AEESHXXXXXXXXXX 542
L + +V + HN +RNGSA + PVPA H +G +L LP+ AEE H
Sbjct: 452 LPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVLPELPQRAEEGHRRWRQRSRLL 273
Query: 543 XXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGVSLLVQR 671
VSPRQL V VRL VQV +RLRRLQ Q + PQGV LLVQR
Sbjct: 272 RVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGVGLLVQR 144
Score = 105 bits (224), Expect(2) = 6e-025
Identities = 58/118 (49%), Positives = 72/118 (61%)
Frame = +2 / -3
Query: 185 SINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDHRRIQSGFTSSQKGCTVV*T 364
SI+T LA+*RARNC SR A Q IGR M A+R D RRI++G TSS +GC T
Sbjct: 630 SISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLDQRRIRTGSTSSHRGCMGACT 451
Query: 365 I*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKATSLS*GKPSMTAPTWLA 538
+ S ++ S* +TEWIS+ STC T +G ST ATS S* +PS APT+ A
Sbjct: 450 TSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSGSTGATSAS*RRPSTVAPTFSA 277
Score = 71.2 bits (149), Expect(2) = 3e-027
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +1
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 145 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 267
Score = 70.7 bits (148), Expect(2) = 3e-027
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / +1
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 325 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 504
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 505 PLVQSACHFSQRHR*PANRL 564
Score = 28.6 bits (56), Expect(2) = 6e-025
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -3
Query: 641 TPRRQPTGSETCSRNTY 691
TPRR+PTGSET Y
Sbjct: 174 TPRRRPTGSETFCDTEY 124
>gb|BI947342.1|BI947342 HVSMEl0005D04f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0005D04f, mRNA sequence
Length = 508
Score = 342 bits (742), Expect = 1e-093
Identities = 134/169 (79%), Positives = 148/169 (87%)
Frame = +1 / +1
Query: 151 KLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLY 330
K+V GSADYI INQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGKPIGP+ANS WLY
Sbjct: 1 KMVMGSADYIXINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGPKANSNWLY 180
Query: 331 IVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKA 510
IVP GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+FY+ YL+EL+KA
Sbjct: 181 IVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKA 360
Query: 511 IDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKASA 657
ID GA+V GYFAWSLLDNFEW SGY+SKFGIVYVDF++P L+RHPKASA
Sbjct: 361 IDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKASA 507
Score = 266 bits (575), Expect = 1e-070
Identities = 126/167 (75%), Positives = 131/167 (78%)
Frame = -1 / -3
Query: 656 ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL* 477
ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS R* *
Sbjct: 506 ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSLR*LR* 327
Query: 476 NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPI 297
N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEFA GPI
Sbjct: 326 NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPI 147
Query: 296 GLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLT 156
GLPF SK TCQSAE*LVG C S+FWPF LAVY*LI +*SAEP+T
Sbjct: 146 GLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIXI*SAEPMT 6
Score = 203 bits (438), Expect = 1e-051
Identities = 93/167 (55%), Positives = 118/167 (70%)
Frame = -3 / -2
Query: 657 G*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFV 478
G RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG QL+EVA V
Sbjct: 507 GRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPV 328
Query: 477 ELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSD 298
E P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+ IRLWS+
Sbjct: 327 EPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSN 148
Query: 297 RFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALD 157
R A+ I NLPI *+A R LL+QFLALH AS VLID N++R A D
Sbjct: 147 RLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLIDXNIVRGAHD 7
Score = 159 bits (341), Expect = 2e-038
Identities = 82/166 (49%), Positives = 100/166 (60%)
Frame = +3 / +3
Query: 156 GQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTTGEFKVALHR 335
G GL GL+ DQS+H * EGPE A A+A L S LAG +C + Q D T GEF++ALHR
Sbjct: 6 GHGLRGLYXDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWTKGEFELALHR 185
Query: 336 PRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRLPR*AEESHX 515
P DV + L + +V + HN +RNGSA + PVPA H +G +L LP+ AEE H
Sbjct: 186 PIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVLPELPQRAEEGHR 365
Query: 516 XXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGV 653
VSPRQL V VRL VQV +RLRRLQ Q + PQGV
Sbjct: 366 RWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGV 503
Score = 115 bits (245), Expect = 4e-025
Identities = 63/128 (49%), Positives = 77/128 (60%)
Frame = +2 / +2
Query: 155 WSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDHRRIQSGFTS 334
WS A R L SI+T LA+*RARNC SR A Q IGR M A+R D RRI++G TS
Sbjct: 5 WSWAPRTILXSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLDQRRIRTGSTS 184
Query: 335 SQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKATSLS*GKPS 514
S +GC T + S ++ S* +TEWIS+ STC T +G ST ATS S* +PS
Sbjct: 185 SHRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSGSTGATSAS*RRPS 364
Query: 515 MTAPTWLA 538
APT+ A
Sbjct: 365 TVAPTFSA 388
Score = 70.7 bits (148), Expect(3) = 2e-027
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / -1
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 340 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 161
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 160 PLVQSACHFSQRHR*PANRL 101
Score = 64.8 bits (135), Expect(3) = 2e-027
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = -2 / -1
Query: 658 RLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
R TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 508 RPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 398
Score = 24.4 bits (47), Expect(3) = 2e-027
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -2 / -1
Query: 196 CID*SQCNPLSP*P 155
C D*SQ +P SP*P
Sbjct: 46 CTD*SQYSPRSP*P 5
>gb|AV920604.1|AV920604 AV920604 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14n06 3', mRNA sequence
Length = 670
Score = 308 bits (666), Expect(2) = 3e-091
Identities = 116/157 (73%), Positives = 134/157 (85%)
Frame = +1 / -2
Query: 211 KGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNP 390
+ + ++ TSYSADWQV Y ERNGKPIGP+ANS WLYIVP GMYGCV+YL KYGNP
Sbjct: 603 RARNCCSRRRTSYSADWQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNP 424
Query: 391 TVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFE 570
+ ITENGMDQPG LTR QYL DTTRV+FY+ YL+EL+KAID GA+V GYFAWSLLDNFE
Sbjct: 423 PIVITENGMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFE 244
Query: 571 WQSGYTSKFGIVYVDFSTPKLERHPKASAYWFRDMLQ 681
W SGY+SKFGIVYVDF++P L+RHPKASAYWFRD+L+
Sbjct: 243 WMSGYSSKFGIVYVDFNSPNLDRHPKASAYWFRDLLR 133
Score = 231 bits (498), Expect(2) = 6e-070
Identities = 111/144 (77%), Positives = 113/144 (78%)
Frame = -1 / +2
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 143 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 322
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 323 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 502
Query: 311 ACGPIGLPFRSKTY*TCQSAE*LV 240
A GPIGLPF SK TCQSAE*LV
Sbjct: 503 AFGPIGLPFLSKA*VTCQSAE*LV 574
Score = 177 bits (380), Expect(2) = 1e-051
Identities = 79/145 (54%), Positives = 102/145 (70%)
Frame = -3 / +1
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 136 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 315
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 316 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 495
Query: 318 *IRLWSDRFAVPF*NILNLPIS*VA 244
IRLWS+R A+ I NLPI *+A
Sbjct: 496 RIRLWSNRLAISLKGIGNLPIG*IA 570
Score = 134 bits (287), Expect(2) = 5e-044
Identities = 70/142 (49%), Positives = 85/142 (59%)
Frame = +3 / -1
Query: 246 LLS*LAGSICFRTERQTDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSA 425
L S LAG +C + Q D T GEF++ALHRP DV + L + +V + HN +RNGSA
Sbjct: 568 LFSRLAGYLCL*EKWQADWTKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSA 389
Query: 426 RKLDSWPVPARHHKGAILQRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNR 605
+ PVPA H +G +L LP+ AEE H VSPRQL V VRL VQV +R
Sbjct: 388 GGAHARPVPAGHDEGPVLPELPQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHR 209
Query: 606 LRRLQHAQARTTPQGVSLLVQR 671
LRRLQ Q + PQGV LLVQR
Sbjct: 208 LRRLQQPQPGSAPQGVGLLVQR 143
Score = 80.8 bits (170), Expect(3) = 2e-026
Identities = 45/98 (45%), Positives = 57/98 (58%)
Frame = +2 / -3
Query: 245 ATQLIGRFNMF*NGTANRSDHRRIQSGFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWIS 424
A Q IGR M A+R D RRI++G TSS +GC T + S ++ S* +TEWIS
Sbjct: 569 AIQPIGRLPMPLREMASRLDQRRIRTGSTSSHRGCMGACTTSARSTGTRRSS*LKTEWIS 390
Query: 425 QET*LVASTCTTPQGCNSTKATSLS*GKPSMTAPTWLA 538
+ STC T +G ST ATS S* +PS APT+ A
Sbjct: 389 RGGSRATSTCGTRRGSGSTGATSAS*RRPSTVAPTFSA 276
Score = 71.2 bits (149), Expect(3) = 1e-029
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +3
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 144 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 266
Score = 70.7 bits (148), Expect(3) = 1e-029
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / +3
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 324 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 503
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 504 PLVQSACHFSQRHR*PANRL 563
Score = 63.8 bits (133), Expect(2) = 5e-044
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +1 / -1
Query: 145 QAKLVKGSADYIGINQYTASYVKGQKLLQQKP 240
+AK+V GSADYIGINQYTAS +KGQKLLQQ P
Sbjct: 670 EAKMVMGSADYIGINQYTASLMKGQKLLQQTP 575
Score = 53.8 bits (111), Expect(2) = 6e-070
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = -1 / +3
Query: 239 GFCWSSFWPFT*LAVY*LIPM*SAEPLTNLA 147
G C S+FWPF LAVY*LIP+*SAEP+T LA
Sbjct: 576 GVCCSNFWPFMRLAVY*LIPI*SAEPMTILA 668
Score = 47.8 bits (98), Expect(2) = 3e-091
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +3 / -3
Query: 147 S*VGQGLSGLHWDQSIHR*LREGPETAPAEA 239
S* G GL GL+WDQS+H * EGPE A A+A
Sbjct: 668 S*NGHGLRGLYWDQSVHS*PHEGPEIAAADA 576
Score = 47.3 bits (97), Expect(3) = 2e-026
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +2 / -2
Query: 146 KLSWSRAQRITLGSINTPLAT*RARNCSSR 235
KL WS A R LGSI+T LA+*RARNC SR
Sbjct: 669 KLKWSWAPRTILGSISTQLAS*RARNCCSR 580
Score = 46.9 bits (96), Expect(2) = 1e-051
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = -3 / +2
Query: 240 RLLLEQFLALHVASGVLIDPNVIR*ALDQLS 148
R LL+QFLALH AS VLIDPN++R A D S
Sbjct: 575 RRLLQQFLALHEASCVLIDPNIVRGAHDHFS 667
Score = 28.6 bits (56), Expect(3) = 2e-026
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -3
Query: 641 TPRRQPTGSETCSRNTY 691
TPRR+PTGSET Y
Sbjct: 173 TPRRRPTGSETFCDTEY 123
Score = 25.8 bits (50), Expect(3) = 1e-029
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / +1
Query: 196 CID*SQCNPLSP*PT*L 146
C D*SQ +P SP*P *L
Sbjct: 619 CTD*SQYSPRSP*PF*L 669
>gb|AV918262.1|AV918262 AV918262 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20h04 3', mRNA sequence
Length = 673
Score = 308 bits (666), Expect(2) = 6e-091
Identities = 116/157 (73%), Positives = 134/157 (85%)
Frame = +1 / -1
Query: 211 KGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNP 390
+ + ++ TSYSADWQV Y ERNGKPIGP+ANS WLYIVP GMYGCV+YL KYGNP
Sbjct: 616 RARNCCSRRRTSYSADWQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNP 437
Query: 391 TVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFE 570
+ ITENGMDQPG LTR QYL DTTRV+FY+ YL+EL+KAID GA+V GYFAWSLLDNFE
Sbjct: 436 PIVITENGMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFE 257
Query: 571 WQSGYTSKFGIVYVDFSTPKLERHPKASAYWFRDMLQ 681
W SGY+SKFGIVYVDF++P L+RHPKASAYWFRD+L+
Sbjct: 256 WMSGYSSKFGIVYVDFNSPNLDRHPKASAYWFRDLLR 146
Score = 231 bits (498), Expect(2) = 3e-069
Identities = 111/144 (77%), Positives = 113/144 (78%)
Frame = -1 / +3
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 156 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 335
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 336 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 515
Query: 311 ACGPIGLPFRSKTY*TCQSAE*LV 240
A GPIGLPF SK TCQSAE*LV
Sbjct: 516 AFGPIGLPFLSKA*VTCQSAE*LV 587
Score = 177 bits (380), Expect(2) = 4e-051
Identities = 79/145 (54%), Positives = 102/145 (70%)
Frame = -3 / +2
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 149 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 328
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 329 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 508
Query: 318 *IRLWSDRFAVPF*NILNLPIS*VA 244
IRLWS+R A+ I NLPI *+A
Sbjct: 509 RIRLWSNRLAISLKGIGNLPIG*IA 583
Score = 134 bits (287), Expect(2) = 3e-042
Identities = 70/142 (49%), Positives = 85/142 (59%)
Frame = +3 / -3
Query: 246 LLS*LAGSICFRTERQTDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSA 425
L S LAG +C + Q D T GEF++ALHRP DV + L + +V + HN +RNGSA
Sbjct: 581 LFSRLAGYLCL*EKWQADWTKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSA 402
Query: 426 RKLDSWPVPARHHKGAILQRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNR 605
+ PVPA H +G +L LP+ AEE H VSPRQL V VRL VQV +R
Sbjct: 401 GGAHARPVPAGHDEGPVLPELPQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHR 222
Query: 606 LRRLQHAQARTTPQGVSLLVQR 671
LRRLQ Q + PQGV LLVQR
Sbjct: 221 LRRLQQPQPGSAPQGVGLLVQR 156
Score = 80.8 bits (170), Expect(3) = 3e-025
Identities = 45/98 (45%), Positives = 57/98 (58%)
Frame = +2 / -2
Query: 245 ATQLIGRFNMF*NGTANRSDHRRIQSGFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWIS 424
A Q IGR M A+R D RRI++G TSS +GC T + S ++ S* +TEWIS
Sbjct: 582 AIQPIGRLPMPLREMASRLDQRRIRTGSTSSHRGCMGACTTSARSTGTRRSS*LKTEWIS 403
Query: 425 QET*LVASTCTTPQGCNSTKATSLS*GKPSMTAPTWLA 538
+ STC T +G ST ATS S* +PS APT+ A
Sbjct: 402 RGGSRATSTCGTRRGSGSTGATSAS*RRPSTVAPTFSA 289
Score = 71.2 bits (149), Expect(3) = 3e-029
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +1
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 157 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 279
Score = 70.7 bits (148), Expect(3) = 3e-029
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / +1
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 337 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 516
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 517 PLVQSACHFSQRHR*PANRL 576
Score = 57.9 bits (120), Expect(2) = 3e-042
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1 / -3
Query: 157 VKGSADYIGINQYTASYVKGQKLLQQKP 240
V GSADYIGINQYTAS +KGQKLLQQ P
Sbjct: 671 VMGSADYIGINQYTASLMKGQKLLQQTP 588
Score = 51.5 bits (106), Expect(2) = 3e-069
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = -1 / +1
Query: 239 GFCWSSFWPFT*LAVY*LIPM*SAEPLT 156
G C S+FWPF LAVY*LIP+*SAEP+T
Sbjct: 589 GVCCSNFWPFMRLAVY*LIPI*SAEPMT 672
Score = 46.9 bits (96), Expect(2) = 6e-091
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +3 / -2
Query: 156 GQGLSGLHWDQSIHR*LREGPETAPAEA 239
G GL GL+WDQS+H * EGPE A A+A
Sbjct: 672 GHGLRGLYWDQSVHS*PHEGPEIAAADA 589
Score = 45.1 bits (92), Expect(2) = 4e-051
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -3 / +3
Query: 240 RLLLEQFLALHVASGVLIDPNVIR*ALD 157
R LL+QFLALH AS VLIDPN++R A D
Sbjct: 588 RRLLQQFLALHEASCVLIDPNIVRGAHD 671
Score = 43.2 bits (88), Expect(3) = 3e-025
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +2 / -1
Query: 155 WSRAQRITLGSINTPLAT*RARNCSSR 235
WS A R LGSI+T LA+*RARNC SR
Sbjct: 673 WSWAPRTILGSISTQLAS*RARNCCSR 593
Score = 28.6 bits (56), Expect(3) = 3e-025
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -2
Query: 641 TPRRQPTGSETCSRNTY 691
TPRR+PTGSET Y
Sbjct: 186 TPRRRPTGSETFCDTEY 136
Score = 24.4 bits (47), Expect(3) = 3e-029
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -2 / +2
Query: 196 CID*SQCNPLSP*P 155
C D*SQ +P SP*P
Sbjct: 632 CTD*SQYSPRSP*P 673
>gb|CB880505.1|CB880505 HM06L21w HM Hordeum vulgare subsp. vulgare cDNA clone HM06L21
3-PRIME, mRNA sequence
Length = 642
Score = 333 bits (722), Expect = 7e-091
Identities = 128/162 (79%), Positives = 143/162 (88%)
Frame = +1 / -3
Query: 196 TASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKH 375
TAS +KGQKLLQQ PTSYSADWQV Y ERNGKPIGP+ANS WLYIVP GMYGCV+YL
Sbjct: 640 TASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQ 461
Query: 376 KYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSL 555
KYGNP + ITENGMDQPG LTR QYL DTTRV+FY+ YL+EL+KAID GA+V GYFAWSL
Sbjct: 460 KYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSL 281
Query: 556 LDNFEWQSGYTSKFGIVYVDFSTPKLERHPKASAYWFRDMLQ 681
LDNFEW SGY+SKFGIVYVDF++P L+RHPKASAYWFRD+L+
Sbjct: 280 LDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKASAYWFRDLLR 155
Score = 255 bits (552), Expect = 2e-067
Identities = 121/159 (76%), Positives = 124/159 (77%)
Frame = -1 / +3
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 165 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 344
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 345 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 524
Query: 311 ACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAV 195
A GPIGLPF SK TCQSAE*LVG C S+FWPF LAV
Sbjct: 525 AFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAV 641
Score = 197 bits (425), Expect = 6e-050
Identities = 89/160 (55%), Positives = 113/160 (70%)
Frame = -3 / +2
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 158 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 337
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 338 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 517
Query: 318 *IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVAS 199
IRLW +R A+ I NLPI *+A R LL+QFLALH AS
Sbjct: 518 RIRLWPNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEAS 637
Score = 147 bits (315), Expect = 9e-035
Identities = 78/159 (49%), Positives = 94/159 (59%)
Frame = +3 / -2
Query: 195 HR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTTGEFKVALHRPRRDVRLCELSEA 374
H * EGPE A A+A L S LAG +C + Q D GEF++ALHRP DV + L +
Sbjct: 641 HS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWAKGEFELALHRPIGDVWVRALPQP 462
Query: 375 QVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRLPR*AEESHXXXXXXXXXXXXVS 554
+V + HN +RNGSA + PVPA H +G +L LP+ AEE H VS
Sbjct: 461 EVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVLPELPQRAEEGHRRWRQRSRLLRVVS 282
Query: 555 PRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGVSLLVQR 671
PRQL V VRL VQV +RLRRLQ Q + PQGV LLVQR
Sbjct: 281 PRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGVGLLVQR 165
Score = 98.2 bits (208), Expect(2) = 9e-023
Identities = 55/115 (47%), Positives = 68/115 (59%)
Frame = +2 / -1
Query: 194 TPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDHRRIQSGFTSSQKGCTVV*TI*S 373
T LA+*RARNC SR A Q IGR M A+R RRI++G TSS +GC T +
Sbjct: 642 TQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLGQRRIRTGSTSSHRGCMGACTTSA 463
Query: 374 TSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKATSLS*GKPSMTAPTWLA 538
S ++ S* +TEWIS+ STC T +G ST ATS S* +PS APT+ A
Sbjct: 462 RSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSGSTGATSAS*RRPSTVAPTFSA 298
Score = 71.2 bits (149), Expect(2) = 1e-026
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +1
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 166 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 288
Score = 68.9 bits (144), Expect(2) = 1e-026
Identities = 34/80 (42%), Positives = 45/80 (56%)
Frame = -2 / +1
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 346 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 525
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+ +S C +H PAN+L
Sbjct: 526 PLAQSACHFSQRHR*PANRL 585
Score = 28.6 bits (56), Expect(2) = 9e-023
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -1
Query: 641 TPRRQPTGSETCSRNTY 691
TPRR+PTGSET Y
Sbjct: 195 TPRRRPTGSETFCDTEY 145
>gb|BE231065.1|BE231065 HVSMEg0016D19f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0016D19f, mRNA sequence
Length = 887
Score = 279 bits (604), Expect(4) = 1e-090
Identities = 108/150 (72%), Positives = 123/150 (82%)
Frame = +1 / +2
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K P FTPEQ+KLVKGS DYIGINQYTA+Y+ Q LQQ PTSYS+DW VQY+ +RNG
Sbjct: 272 KERLPSFTPEQSKLVKGSVDYIGINQYTATYMADQPTLQQPPTSYSSDWHVQYIFQRNGV 451
Query: 295 PIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQ 474
PIG +ANS WLYIVP GMYGCVNY++ KY NPT+ I+ENGMDQP NLTR LHD +RV+
Sbjct: 452 PIGQKANSNWLYIVPTGMYGCVNYIREKYNNPTIIISENGMDQPANLTREGVLHDASRVE 631
Query: 475 FYKGYLAELRKAIDDGADVAGYFAWSLLDN 564
FYK YLAEL+KAIDDGA+V GYF WSLLDN
Sbjct: 632 FYKTYLAELKKAIDDGANVVGYFGWSLLDN 721
Score = 202 bits (435), Expect(3) = 2e-058
Identities = 99/151 (65%), Positives = 105/151 (69%)
Frame = -1 / -3
Query: 566 KLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVG 387
+LS RDQ K*P T APSS+AF SSAR* L*N TL SCR RV+F G*SIPFS + VG
Sbjct: 723 ELSSRDQPK*PTTFAPSSIAFFSSAR*VL*NSTLEASCRTPSRVRFAG*SIPFSDIMIVG 544
Query: 386 FPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT 207
Y *FT PY+P GTM*S EFA PIG PFR Y*TCQS E*LVG CWS W
Sbjct: 543 LLYFSLM*FTHPYMPVGTM*SQLEFAFCPIGTPFR*NIY*TCQSDE*LVGGCWSVGWSAM 364
Query: 206 *LAVY*LIPM*SAEPLTNLACSGVNLGQPLF 114
*+AVY* IPM*S EPLTNL CSGV LG F
Sbjct: 363 *VAVY*FIPM*STEPLTNLDCSGVKLGNLSF 271
Score = 160 bits (343), Expect(2) = 7e-041
Identities = 75/142 (52%), Positives = 95/142 (66%)
Frame = -3 / -2
Query: 564 VVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWI 385
VVE+ P+EVA HV AV+D QL EV VEL P GVVQ QV LIHSV GY + +
Sbjct: 721 VVEQGPAEVADHVRAVVDRLLQLGEVGLVELDPRGVVQDSLAGQVRGLIHSVFGYNDRRV 542
Query: 384 SILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHV 205
+L+ +VHT++H WDDVKP+ +RL S+R+A+ ILN+P+ *VA LLE++L HV
Sbjct: 541 VVLLPYVVHTSIHACWDDVKPIGVRLLSNRYAISLKYILNMPVR*VACWWLLERWLVCHV 362
Query: 204 ASGVLIDPNVIR*ALDQLSLLR 139
+LI PNVI ALDQL L R
Sbjct: 361 GRCILIYPNVIYRALDQLRLFR 296
Score = 119 bits (254), Expect(3) = 1e-032
Identities = 62/139 (44%), Positives = 79/139 (56%)
Frame = +3 / +1
Query: 150 *VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTTGEFKVAL 329
*VGQGL LHWD+S++ L P APA LL *LA SI + +TD T GE ++AL
Sbjct: 307 *VGQGLCRLHWDKSVYSDLHGRPTNAPATTNKLLI*LACSIYISAKWRTDWTEGELQLAL 486
Query: 330 HRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRLPR*AEES 509
HRP R V +CEL + +V + + + R+RNGS R+ D PAR +G +LQ LPR AEE
Sbjct: 487 HRPNRHVWMCELHKGEVQQPDDHYIRKRNGSTREPDPRGSPARRLEGRVLQDLPRRAEEG 666
Query: 510 HXXXXXXXXXXXXVSPRQL 566
V RQL
Sbjct: 667 DRRRRERGRLLRLVPARQL 723
Score = 115 bits (245), Expect(2) = 2e-028
Identities = 61/132 (46%), Positives = 77/132 (58%)
Frame = +2 / +3
Query: 143 SKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDHRRIQS 322
+ LSWSRA ITLG I+ T + SS AT L G FN++ + A R D RR
Sbjct: 300 NNLSWSRAL*ITLG*ISIQRPTWQTNQRSSNHQQATHLTGMFNIYFSEMAYRLDRRRTPI 479
Query: 323 GFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKATSLS* 502
GFTSSQ+ C V*T * S ++ P+TEWI+ T* +CTTP+G +ST+ TS S*
Sbjct: 480 GFTSSQQACMDV*TT*GRSTTTRRSLYPKTEWINPRT*PARESCTTPRGSSSTRPTSPS* 659
Query: 503 GKPSMTAPTWLA 538
+ S TA TW A
Sbjct: 660 RRRSTTARTWSA 695
Score = 50.6 bits (104), Expect(4) = 1e-090
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2 / +2
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
+S D+AAAQRARDFHVGWF DPL
Sbjct: 161 DSPADKAAAQRARDFHVGWFLDPL 232
Score = 38.6 bits (78), Expect(4) = 1e-090
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 75 INGHYPQIMQDIVKERLP 128
+NG YP+ MQDIVKERLP
Sbjct: 233 LNGQYPKTMQDIVKERLP 286
Score = 34.5 bits (69), Expect(3) = 2e-058
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -2 / -2
Query: 73 *WISKPTNMEIPCSLSRCLV 14
*WI KPTNME+P L C V
Sbjct: 232 *WIKKPTNMEVPGPLGCCFV 173
Score = 32.7 bits (65), Expect(3) = 1e-032
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1 / +1
Query: 1 KLNRRPSSGSKSKGFPCWLVC*S 69
+L R SS K +G PCWLV *S
Sbjct: 160 RLTCRQSSSPKGQGLPCWLVS*S 228
Score = 30.4 bits (60), Expect(2) = 2e-028
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3 / +3
Query: 3 TQPKTKQRLKEQGISMLVGLLIH 71
T TKQ+ K G SMLVG LIH
Sbjct: 162 THLPTKQQPKGPGTSMLVGFLIH 230
Score = 28.6 bits (56), Expect(3) = 2e-058
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2 / -3
Query: 127 GSLSFTISCIICG*CPF 77
G+LSFTISC++ G PF
Sbjct: 285 GNLSFTISCMVFGY*PF 235
Score = 27.6 bits (54), Expect(2) = 7e-041
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3 / -3
Query: 72 NGSANQPTWKSXXXXXXAWSSVE 4
+GS NQPTWKS A S+ E
Sbjct: 231 SGSRNQPTWKSLALWAAALSAGE 163
Score = 25.8 bits (50), Expect(3) = 1e-032
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2 / +1
Query: 77 KWTLSTDNARYCERE 121
KW++ D+ARY +RE
Sbjct: 235 KWSIPEDHARYSKRE 279
Score = 22.6 bits (43), Expect(4) = 1e-090
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 598 GIVYVDFST 624
GIVYVDF+T
Sbjct: 752 GIVYVDFTT 778
>gb|AV919042.1|AV919042 AV919042 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4d02 3', mRNA sequence
Length = 621
Score = 325 bits (704), Expect = 2e-088
Identities = 124/156 (79%), Positives = 138/156 (88%)
Frame = +1 / -3
Query: 214 GQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPT 393
GQKLLQQ PTSYSADWQV Y ERNGKPIGP+ANS WLYIVP GMYGCV+YL KYGNP
Sbjct: 619 GQKLLQQTPTSYSADWQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPP 440
Query: 394 VFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEW 573
+ ITENGMDQPG LTR QYL DTTRV+FY+ YL+EL+KAID GA+V GYFAWSLLDNFEW
Sbjct: 439 IVITENGMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEW 260
Query: 574 QSGYTSKFGIVYVDFSTPKLERHPKASAYWFRDMLQ 681
SGY+SKFGIVYVDF++P L+RHPKASAYWFRD+L+
Sbjct: 259 MSGYSSKFGIVYVDFNSPNLDRHPKASAYWFRDLLR 152
Score = 249 bits (539), Expect = 1e-065
Identities = 117/153 (76%), Positives = 120/153 (78%)
Frame = -1 / +3
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 162 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 341
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 342 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 521
Query: 311 ACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWP 213
A GPIGLPF SK TCQSAE*LVG C S+FWP
Sbjct: 522 AFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWP 620
Score = 191 bits (412), Expect = 4e-048
Identities = 86/155 (55%), Positives = 110/155 (70%)
Frame = -3 / +2
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 155 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 334
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 335 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 514
Query: 318 *IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLA 214
IRLWS+R A+ I NLPI *+A R LL+QFLA
Sbjct: 515 RIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLA 619
Score = 144 bits (310), Expect = 5e-034
Identities = 76/153 (49%), Positives = 92/153 (60%)
Frame = +3 / -2
Query: 213 GPETAPAEAY*LLS*LAGSICFRTERQTDRTTGEFKVALHRPRRDVRLCELSEAQVWKSN 392
GPE A A+A L S LAG +C + Q D T GEF++ALHRP DV + L + +V +
Sbjct: 620 GPEIAAADADQLFSRLAGYLCL*EKWQADWTKGEFELALHRPIGDVWVRALPQPEVREPA 441
Query: 393 SFHNRERNGSARKLDSWPVPARHHKGAILQRLPR*AEESHXXXXXXXXXXXXVSPRQLRV 572
HN +RNGSA + PVPA H +G +L LP+ AEE H VSPRQL V
Sbjct: 440 DRHN*KRNGSAGGAHARPVPAGHDEGPVLPELPQRAEEGHRRWRQRSRLLRVVSPRQL*V 261
Query: 573 AVRLHVQVWNRLRRLQHAQARTTPQGVSLLVQR 671
VRL VQV +RLRRLQ Q + PQGV LLVQR
Sbjct: 260 DVRLLVQVRHRLRRLQQPQPGSAPQGVGLLVQR 162
Score = 95.0 bits (201), Expect(2) = 8e-022
Identities = 52/109 (47%), Positives = 64/109 (58%)
Frame = +2 / -1
Query: 212 RARNCSSRSLLATQLIGRFNMF*NGTANRSDHRRIQSGFTSSQKGCTVV*TI*STSMEIQ 391
RARNC SR A Q IGR M A+R D RRI++G TSS +GC T + S +
Sbjct: 621 RARNCCSRRRPAIQPIGRLPMPLREMASRLDQRRIRTGSTSSHRGCMGACTTSARSTGTR 442
Query: 392 QFS*PRTEWISQET*LVASTCTTPQGCNSTKATSLS*GKPSMTAPTWLA 538
+ S* +TEWIS+ STC T +G ST ATS S* +PS APT+ A
Sbjct: 441 RSS*LKTEWISRGGSRATSTCGTRRGSGSTGATSAS*RRPSTVAPTFSA 295
Score = 71.2 bits (149), Expect(2) = 3e-027
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +1
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 163 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 285
Score = 70.7 bits (148), Expect(2) = 3e-027
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / +1
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 343 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 522
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 523 PLVQSACHFSQRHR*PANRL 582
Score = 28.6 bits (56), Expect(2) = 8e-022
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -1
Query: 641 TPRRQPTGSETCSRNTY 691
TPRR+PTGSET Y
Sbjct: 192 TPRRRPTGSETFCDTEY 142
>gb|AV914116.1|AV914116 AV914116 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4m17 5', mRNA sequence
Length = 604
Score = 258 bits (557), Expect(3) = 1e-087
Identities = 101/131 (77%), Positives = 111/131 (84%)
Frame = +1 / +2
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K PKFTP +AK+V GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGK
Sbjct: 212 KERLPKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGK 391
Query: 295 PIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQ 474
PIGP+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+
Sbjct: 392 PIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVR 571
Query: 475 FYKGYLAELRK 507
FY+ YL+EL+K
Sbjct: 572 FYRSYLSELKK 604
Score = 196 bits (422), Expect(3) = 7e-063
Identities = 94/131 (71%), Positives = 98/131 (74%)
Frame = -1 / -2
Query: 506 FLSSAR*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM* 327
F SS R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*
Sbjct: 603 FFSSLR*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM* 424
Query: 326 SHFEFACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLA 147
S FEFA GPIGLPF SK TCQSAE*LVG C S+FWPF LAVY*LIP+*SAEP+T LA
Sbjct: 423 SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIPI*SAEPMTILA 244
Query: 146 CSGVNLGQPLF 114
+GVNLG F
Sbjct: 243 SAGVNLGNLSF 211
Score = 147 bits (315), Expect(3) = 4e-047
Identities = 67/125 (53%), Positives = 86/125 (68%)
Frame = -3 / -1
Query: 501 QLSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKP 322
QL+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P
Sbjct: 598 QLAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEP 419
Query: 321 L*IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLL 142
+ IRLWS+R A+ I NLPI *+A R LL+QFLALH AS VLIDPN++R A D S
Sbjct: 418 VRIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLIDPNIVRGAHDHFSFS 239
Query: 141 RSKLG 127
RS+LG
Sbjct: 238 RSELG 224
Score = 126 bits (269), Expect(3) = 5e-040
Identities = 63/131 (48%), Positives = 82/131 (62%)
Frame = +3 / +1
Query: 114 KERLPQVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQ 293
+ + QV+S S* G GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q
Sbjct: 211 EREVAQVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQ 390
Query: 294 TDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGA 473
D T GEF++ALHRP DV + L + +V + HN +RNGSA + PVPA H +G
Sbjct: 391 ADWTKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGP 570
Query: 474 ILQRLPR*AEE 506
+L LP+ AEE
Sbjct: 571 VLPELPQRAEE 603
Score = 114 bits (243), Expect(3) = 2e-033
Identities = 63/129 (48%), Positives = 76/129 (58%)
Frame = +2 / +3
Query: 116 REAAPSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTAN 295
+ PS L KL WS A R LGSI+T LA+*RARNC SR A Q IGR M A+
Sbjct: 213 KRGCPSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMAS 392
Query: 296 RSDHRRIQSGFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCN 475
R D RRI++G TSS +GC T + S ++ S* +TEWIS+ STC T +G
Sbjct: 393 RLDQRRIRTGSTSSHRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSG 572
Query: 476 STKATSLS* 502
ST ATS S*
Sbjct: 573 STGATSAS* 599
Score = 60.6 bits (126), Expect(3) = 1e-087
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +2 / +2
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NSTEDQAAAQRARDFHVGWF DPL
Sbjct: 101 NSTEDQAAAQRARDFHVGWFVDPL 172
Score = 46.0 bits (94), Expect(3) = 7e-063
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1 / -1
Query: 131 LGQPLFHNILHYLWIMSIY 75
LGQPLFH +LHYLW+M +Y
Sbjct: 229 LGQPLFHTVLHYLWVMPVY 173
Score = 44.6 bits (91), Expect(3) = 1e-087
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3 / +2
Query: 75 INGHYPQIMQDIVKERLPQ 131
INGHYPQIMQD VKERLP+
Sbjct: 173 INGHYPQIMQDRVKERLPK 229
Score = 44.6 bits (91), Expect(3) = 5e-040
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / +1
Query: 1 KLNRRPSSGSKSKGFPCWLVC 63
+LN RPSS SKS+G PCWLVC
Sbjct: 100 QLN*RPSSSSKSQGLPCWLVC 162
Score = 42.3 bits (86), Expect(3) = 4e-047
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2 / -2
Query: 127 GSLSFTISCIICG*CPFI 74
G+LSFT SCIICG*CPFI
Sbjct: 225 GNLSFTRSCIICG*CPFI 172
Score = 37.7 bits (76), Expect(3) = 7e-063
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -3 / -2
Query: 72 NGSANQPTWKSXXXXXXAWSSVE 4
+GS NQPTWKS AWSSVE
Sbjct: 171 SGSTNQPTWKSLAL*AAAWSSVE 103
Score = 37.3 bits (75), Expect(3) = 4e-047
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / -1
Query: 67 ISKPTNMEIPCSLSRCLVFG*V 2
+ KP NME+P SLS CLVF *V
Sbjct: 166 VDKPANMEVPGSLSCCLVFS*V 101
Score = 34.5 bits (69), Expect(3) = 2e-033
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 3 TQPKTKQRLKEQGISMLVGL 62
TQ KTKQ+LKE G SML GL
Sbjct: 102 TQLKTKQQLKEPGTSMLAGL 161
Score = 32.2 bits (64), Expect(3) = 5e-040
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 85 IIHR*CKIL*KRGCP 129
I HR*CK +*KRGCP
Sbjct: 183 ITHR*CKTV*KRGCP 227
Score = 31.8 bits (63), Expect(3) = 2e-033
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2 / +1
Query: 68 PLNKWTLSTDNARYCEREAA 127
P +K L TDNAR CERE A
Sbjct: 166 PADKRALPTDNARPCEREVA 225
>gb|CB859019.1|CB859019 HI09A13w HI Hordeum vulgare subsp. vulgare cDNA clone HI09A13
3-PRIME, mRNA sequence
Length = 680
Score = 246 bits (532), Expect(2) = 4e-087
Identities = 96/122 (78%), Positives = 105/122 (86%)
Frame = +1 / -3
Query: 190 QYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYL 369
QYTAS +KGQKLLQQ PTSYSADWQV Y ERNGKPIGP+ANS WLYIVP GMYGCV+YL
Sbjct: 678 QYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYL 499
Query: 370 KHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAW 549
KYGNP + ITENGMDQPG LTR QYL DTTRV+FY+ YL+EL+KAID GA+V GYFAW
Sbjct: 498 SQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAW 319
Query: 550 SL 555
SL
Sbjct: 318 SL 313
Score = 185 bits (398), Expect(2) = 4e-063
Identities = 88/121 (72%), Positives = 89/121 (73%)
Frame = -1 / +2
Query: 554 RDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYL 375
RD AK*P T AP SMAF SS R* *N TLVVS RYW RV PG*SIPFSVM GFPY
Sbjct: 314 RDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYF 493
Query: 374 CFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAV 195
R* T PYIP GTM*S FEFA GPIGLPF SK TCQSAE*LVG C S+FWPF LAV
Sbjct: 494 WLR*CTHPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAV 673
Query: 194 Y 192
Y
Sbjct: 674 Y 676
Score = 143 bits (307), Expect(2) = 1e-047
Identities = 65/122 (53%), Positives = 83/122 (68%)
Frame = -3 / +1
Query: 555 ERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISIL 376
ERP EVA +VGA +DG QL+EVA VE P V QVL + LIHSV Y++ + +L
Sbjct: 313 ERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVL 492
Query: 375 VLQIVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASG 196
+ ++VH +HP WDDV+P+ IRLW +R A+ I NLPI *+A R LL+QFLALH AS
Sbjct: 493 LAEVVHAPIHPRWDDVEPVRIRLWPNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASC 672
Query: 195 VL 190
VL
Sbjct: 673 VL 678
Score = 99.6 bits (211), Expect(2) = 5e-031
Identities = 52/122 (42%), Positives = 67/122 (54%)
Frame = +3 / -2
Query: 192 IHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTTGEFKVALHRPRRDVRLCELSE 371
+H * EGPE A A+A L S LAG +C + Q D GEF++ALHRP DV + L +
Sbjct: 676 VHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWAKGEFELALHRPIGDVWVRALPQ 497
Query: 372 AQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRLPR*AEESHXXXXXXXXXXXXV 551
+V + HN +RNGSA + PVPA H +G +L LP+ AEE H V
Sbjct: 496 PEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVLPELPQRAEEGHRRWRQRSRLLRVV 317
Query: 552 SP 557
SP
Sbjct: 316 SP 311
Score = 98.7 bits (209), Expect(2) = 7e-023
Identities = 55/116 (47%), Positives = 69/116 (59%)
Frame = +2 / -1
Query: 191 NTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDHRRIQSGFTSSQKGCTVV*TI* 370
+T LA+*RARNC SR A Q IGR M A+R RRI++G TSS +GC T
Sbjct: 677 STQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLGQRRIRTGSTSSHRGCMGACTTS 498
Query: 371 STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKATSLS*GKPSMTAPTWLA 538
+ S ++ S* +TEWIS+ STC T +G ST ATS S* +PS APT+ A
Sbjct: 497 ARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSGSTGATSAS*RRPSTVAPTFSA 330
Score = 95.5 bits (202), Expect(2) = 4e-087
Identities = 34/42 (80%), Positives = 40/42 (95%)
Frame = +1 / -1
Query: 556 LDNFEWQSGYTSKFGIVYVDFSTPKLERHPKASAYWFRDMLQ 681
LDNFEW SGY+SKFGIVYVDF++P L+RHPKASAYWFRD+L+
Sbjct: 311 LDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKASAYWFRDLLR 186
Score = 76.7 bits (161), Expect(2) = 4e-063
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -1 / +1
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSR 555
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSR
Sbjct: 196 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSR 312
Score = 68.9 bits (144), Expect(2) = 4e-023
Identities = 34/80 (42%), Positives = 45/80 (56%)
Frame = -2 / +3
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 378 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 557
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+ +S C +H PAN+L
Sbjct: 558 PLAQSACHFSQRHR*PANRL 617
Score = 66.6 bits (139), Expect(2) = 1e-047
Identities = 26/39 (66%), Positives = 30/39 (76%)
Frame = -2 / +2
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRG 554
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRG
Sbjct: 197 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRG 313
Score = 59.3 bits (123), Expect(2) = 4e-023
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = -3 / +3
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVE 556
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVE
Sbjct: 189 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVE 311
Score = 55.1 bits (114), Expect(2) = 5e-031
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3 / -3
Query: 555 PRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGVSLLVQR 671
PRQL V VRL VQV +RLRRLQ Q + PQGV LLVQR
Sbjct: 312 PRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGVGLLVQR 196
Score = 28.6 bits (56), Expect(2) = 7e-023
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -2
Query: 641 TPRRQPTGSETCSRNTY 691
TPRR+PTGSET Y
Sbjct: 226 TPRRRPTGSETFCDTEY 176
>gb|AV917200.1|AV917200 AV917200 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8l06 5', mRNA sequence
Length = 474
Score = 318 bits (688), Expect = 3e-086
Identities = 124/157 (78%), Positives = 136/157 (86%)
Frame = +1 / +1
Query: 157 VKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIV 336
V GSA YIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGKPIGP+ANS WLYIV
Sbjct: 1 VMGSAXYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGPKANSNWLYIV 180
Query: 337 PEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAID 516
P GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+FY+ YL+EL+KAID
Sbjct: 181 PSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKAID 360
Query: 517 DGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTP 627
GA+V GYFAW LLDNFEW SGY+SKFGIVYVDF++P
Sbjct: 361 GGANVLGYFAWXLLDNFEWMSGYSSKFGIVYVDFNSP 471
Score = 244 bits (527), Expect = 5e-064
Identities = 116/157 (73%), Positives = 121/157 (77%)
Frame = -1 / -2
Query: 629 LGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCR 450
LG+LKST*T+PNLD *PD HSKLSRR AK*P T AP SMAF SS R* *N TLVVS R
Sbjct: 473 LGLLKST*TMPNLDE*PDIHSKLSRRXHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSRR 294
Query: 449 YWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY 270
YW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEFA GPIGLPF SK
Sbjct: 293 YWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLPFLSKA* 114
Query: 269 *TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPL 159
TCQSAE*LVG C S+FWPF LAVY*LIP+* AEP+
Sbjct: 113 VTCQSAE*LVGVCCSNFWPFMRLAVY*LIPI*XAEPM 3
Score = 193 bits (415), Expect = 1e-048
Identities = 88/158 (55%), Positives = 111/158 (70%)
Frame = -3 / -1
Query: 630 LGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQ 451
+G EVDVDD++LGRV PL+VVEE P EVA +VGA +DG QL+EVA VE P V Q
Sbjct: 474 VGAVEVDVDDAELGRVAGHPLKVVEEXPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQ 295
Query: 450 VLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NI 271
VL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+ IRLWS+R A+ I
Sbjct: 294 VLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAISLKGI 115
Query: 270 LNLPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALD 157
NLPI *+A R LL+QFLALH AS VLIDPN+ R A D
Sbjct: 114 GNLPIG*IAGRRLLQQFLALHEASCVLIDPNIXRGAHD 1
Score = 150 bits (323), Expect = 7e-036
Identities = 77/156 (49%), Positives = 94/156 (60%)
Frame = +3 / +3
Query: 162 GLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTTGEFKVALHRPR 341
GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q D T GEF++ALHRP
Sbjct: 6 GLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWTKGEFELALHRPI 185
Query: 342 RDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRLPR*AEESHXXX 521
DV + L + +V + HN +RNGSA + PVPA H +G +L LP+ AEE H
Sbjct: 186 GDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVLPELPQRAEEGHRRW 365
Query: 522 XXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQ 629
SPRQL V VRL VQV +RLRRLQ Q
Sbjct: 366 RQRSRLLRVXSPRQL*VDVRLLVQVRHRLRRLQQPQ 473
Score = 113 bits (241), Expect = 1e-024
Identities = 63/127 (49%), Positives = 77/127 (60%)
Frame = +2 / +2
Query: 158 SRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDHRRIQSGFTSS 337
S A R LGSI+T LA+*RARNC SR A Q IGR M A+R D RRI++G TSS
Sbjct: 2 SWAPRXILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLDQRRIRTGSTSS 181
Query: 338 QKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKATSLS*GKPSM 517
+GC T + S ++ S* +TEWIS+ STC T +G ST ATS S* +PS
Sbjct: 182 HRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSGSTGATSAS*RRPST 361
Query: 518 TAPTWLA 538
APT+ A
Sbjct: 362 VAPTFSA 382
Score = 70.7 bits (148), Expect(2) = 4e-021
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / -3
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 334 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 155
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 154 PLVQSACHFSQRHR*PANRL 95
Score = 50.6 bits (104), Expect(2) = 4e-021
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -2 / -3
Query: 628 WAC*SRRRRFQTWTCNLTATRSCRGE 551
W C*SRRRR +TWT + T+T+SCRGE
Sbjct: 472 WGC*SRRRRCRTWTSSRTSTQSCRGE 395
>gb|AV918243.1|AV918243 AV918243 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20f24 3', mRNA sequence
Length = 629
Score = 308 bits (666), Expect = 4e-083
Identities = 116/157 (73%), Positives = 134/157 (85%)
Frame = +1 / -3
Query: 211 KGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNP 390
+ + ++ TSYSADWQV Y ERNGKPIGP+ANS WLYIVP GMYGCV+YL KYGNP
Sbjct: 624 RARNCCSRRRTSYSADWQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNP 445
Query: 391 TVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFE 570
+ ITENGMDQPG LTR QYL DTTRV+FY+ YL+EL+KAID GA+V GYFAWSLLDNFE
Sbjct: 444 PIVITENGMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFE 265
Query: 571 WQSGYTSKFGIVYVDFSTPKLERHPKASAYWFRDMLQ 681
W SGY+SKFGIVYVDF++P L+RHPKASAYWFRD+L+
Sbjct: 264 WMSGYSSKFGIVYVDFNSPNLDRHPKASAYWFRDLLR 154
Score = 231 bits (498), Expect(2) = 4e-061
Identities = 111/144 (77%), Positives = 113/144 (78%)
Frame = -1 / +2
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 164 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 343
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 344 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 523
Query: 311 ACGPIGLPFRSKTY*TCQSAE*LV 240
A GPIGLPF SK TCQSAE*LV
Sbjct: 524 AFGPIGLPFLSKA*VTCQSAE*LV 595
Score = 177 bits (380), Expect(2) = 1e-044
Identities = 79/145 (54%), Positives = 102/145 (70%)
Frame = -3 / +1
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 157 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 336
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 337 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 516
Query: 318 *IRLWSDRFAVPF*NILNLPIS*VA 244
IRLWS+R A+ I NLPI *+A
Sbjct: 517 RIRLWSNRLAISLKGIGNLPIG*IA 591
Score = 134 bits (287), Expect(2) = 4e-032
Identities = 70/142 (49%), Positives = 85/142 (59%)
Frame = +3 / -2
Query: 246 LLS*LAGSICFRTERQTDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSA 425
L S LAG +C + Q D T GEF++ALHRP DV + L + +V + HN +RNGSA
Sbjct: 589 LFSRLAGYLCL*EKWQADWTKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSA 410
Query: 426 RKLDSWPVPARHHKGAILQRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNR 605
+ PVPA H +G +L LP+ AEE H VSPRQL V VRL VQV +R
Sbjct: 409 GGAHARPVPAGHDEGPVLPELPQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHR 230
Query: 606 LRRLQHAQARTTPQGVSLLVQR 671
LRRLQ Q + PQGV LLVQR
Sbjct: 229 LRRLQQPQPGSAPQGVGLLVQR 164
Score = 71.2 bits (149), Expect(2) = 3e-027
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +3
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 165 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 287
Score = 70.7 bits (148), Expect(2) = 3e-027
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / +3
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 345 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 524
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 525 PLVQSACHFSQRHR*PANRL 584
Score = 24.4 bits (47), Expect(2) = 4e-061
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1 / +3
Query: 239 GFCWSSFWPF 210
G C S+FWPF
Sbjct: 597 GVCCSNFWPF 626
Score = 24.0 bits (46), Expect(2) = 4e-032
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / -2
Query: 208 VKGQKLLQQKP 240
+KGQKLLQQ P
Sbjct: 628 MKGQKLLQQTP 596
Score = 23.1 bits (44), Expect(2) = 1e-044
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / +2
Query: 240 RLLLEQFLALH 208
R LL+QFLALH
Sbjct: 596 RRLLQQFLALH 628
>gb|AV918260.1|AV918260 AV918260 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20h02 3', mRNA sequence
Length = 629
Score = 307 bits (665), Expect = 5e-083
Identities = 116/150 (77%), Positives = 132/150 (88%)
Frame = +1 / -3
Query: 232 QKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITEN 411
++ TSYSADWQV Y ERNGKPIGP+ANS WLYIVP GMYGCV+YL KYGNP + ITEN
Sbjct: 609 RRRTSYSADWQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITEN 430
Query: 412 GMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTS 591
GMDQPG LTR QYL DTTRV+FY+ YL+EL+KAID GA+V GYFAWSLLDNFEW SGY+S
Sbjct: 429 GMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSS 250
Query: 592 KFGIVYVDFSTPKLERHPKASAYWFRDMLQ 681
KFGIVYVDF++P L+RHPKASAYWFRD+L+
Sbjct: 249 KFGIVYVDFNSPNLDRHPKASAYWFRDLLR 160
Score = 231 bits (498), Expect = 5e-060
Identities = 111/144 (77%), Positives = 113/144 (78%)
Frame = -1 / +2
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 170 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 349
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 350 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 529
Query: 311 ACGPIGLPFRSKTY*TCQSAE*LV 240
A GPIGLPF SK TCQSAE*LV
Sbjct: 530 AFGPIGLPFLSKA*VTCQSAE*LV 601
Score = 177 bits (380), Expect = 1e-043
Identities = 79/145 (54%), Positives = 102/145 (70%)
Frame = -3 / +1
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 163 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 342
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 343 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 522
Query: 318 *IRLWSDRFAVPF*NILNLPIS*VA 244
IRLWS+R A+ I NLPI *+A
Sbjct: 523 RIRLWSNRLAISLKGIGNLPIG*IA 597
Score = 134 bits (287), Expect = 7e-031
Identities = 70/142 (49%), Positives = 85/142 (59%)
Frame = +3 / -2
Query: 246 LLS*LAGSICFRTERQTDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSA 425
L S LAG +C + Q D T GEF++ALHRP DV + L + +V + HN +RNGSA
Sbjct: 595 LFSRLAGYLCL*EKWQADWTKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSA 416
Query: 426 RKLDSWPVPARHHKGAILQRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNR 605
+ PVPA H +G +L LP+ AEE H VSPRQL V VRL VQV +R
Sbjct: 415 GGAHARPVPAGHDEGPVLPELPQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHR 236
Query: 606 LRRLQHAQARTTPQGVSLLVQR 671
LRRLQ Q + PQGV LLVQR
Sbjct: 235 LRRLQQPQPGSAPQGVGLLVQR 170
Score = 71.2 bits (149), Expect(3) = 2e-027
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +3
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 171 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 293
Score = 70.7 bits (148), Expect(3) = 2e-027
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / +3
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 351 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 530
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 531 PLVQSACHFSQRHR*PANRL 590
Score = 21.7 bits (41), Expect(3) = 2e-027
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1 / +3
Query: 239 GFCWSSFWP 213
G C S+FWP
Sbjct: 603 GVCCSNFWP 629
>gb|BM100114.2|BM100114 EBma01_SQ001_D19_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ001_D19 5', mRNA sequence
Length = 480
Score = 189 bits (408), Expect(2) = 4e-082
Identities = 74/93 (79%), Positives = 79/93 (84%)
Frame = +1 / +3
Query: 151 KLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLY 330
K+V GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGKPIGP+ANS WLY
Sbjct: 3 KMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGPKANSNWLY 182
Query: 331 IVPEGMYGCVNYLKHKYGNPTVFITENGMDQPG 429
IVP GMYGCV+YL KYGNP + ITENGMD G
Sbjct: 183 IVPSGMYGCVHYLSQKYGNPPIVITENGMDXAG 281
Score = 148 bits (317), Expect(2) = 3e-060
Identities = 68/93 (73%), Positives = 71/93 (76%)
Frame = -1 / -3
Query: 428 PG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*TCQSAE 249
P SIPFSVM GFPY R* T PYIP GTM*S FEFA GPIGLPF SK TCQSAE
Sbjct: 280 PAXSIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE 101
Query: 248 *LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNL 150
*LVG C S+FWPF LAVY*LIP+*SAEP+T L
Sbjct: 100 *LVGVCCSNFWPFMRLAVY*LIPI*SAEPMTIL 2
Score = 135 bits (290), Expect(2) = 4e-082
Identities = 52/68 (76%), Positives = 60/68 (88%)
Frame = +1 / +1
Query: 424 PGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGI 603
PG LTR QYL DTTRV+FY+ YL+EL+KAID GA+V GYFAWSLL NFEW SGY+SKFGI
Sbjct: 277 PGGLTRDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLXNFEWMSGYSSKFGI 456
Query: 604 VYVDFSTP 627
VYVDF++P
Sbjct: 457 VYVDFNSP 480
Score = 118 bits (253), Expect(2) = 7e-045
Identities = 49/88 (55%), Positives = 65/88 (73%)
Frame = -3 / -2
Query: 420 IHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NILNLPIS*VAS 241
IHSV Y++ + +L+ ++VH +HP WDDV+P+ IRLWS+R A+ I NLPI *+A
Sbjct: 272 IHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAISLKGIGNLPIG*IAG 93
Query: 240 RLLLEQFLALHVASGVLIDPNVIR*ALD 157
R LL+QFLALH AS VLIDPN++R A D
Sbjct: 92 RRLLQQFLALHEASCVLIDPNIVRGAHD 9
Score = 104 bits (221), Expect(2) = 3e-060
Identities = 50/68 (73%), Positives = 52/68 (76%)
Frame = -1 / -2
Query: 626 GVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRY 447
G+LKST*T+PNLD *PD HSKL RRD AK*P T AP SMAF SS R* *N TLVVS RY
Sbjct: 479 GLLKST*TMPNLDE*PDIHSKLXRRDHAK*PRTLAPPSMAFFSSLR*LR*NRTLVVSRRY 300
Query: 446 WPRVKFPG 423
W RV PG
Sbjct: 299 WSRVSPPG 276
Score = 97.7 bits (207), Expect(2) = 3e-032
Identities = 46/91 (50%), Positives = 59/91 (64%)
Frame = +3 / +2
Query: 156 GQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTTGEFKVALHR 335
G GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q D T GEF++ALHR
Sbjct: 8 GHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWTKGEFELALHR 187
Query: 336 PRRDVRLCELSEAQVWKSNSFHNRERNGSAR 428
P DV + L + +V + HN +RNGS+R
Sbjct: 188 PIGDVWVRALPQPEVREPADRHN*KRNGSSR 280
Score = 86.8 bits (183), Expect(2) = 2e-022
Identities = 46/91 (50%), Positives = 56/91 (61%)
Frame = +2 / +1
Query: 149 LSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDHRRIQSGF 328
L WS A R LGSI+T LA+*RARNC SR A Q IGR M A+R D RRI++G
Sbjct: 1 LKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLDQRRIRTGS 180
Query: 329 TSSQKGCTVV*TI*STSMEIQQFS*PRTEWI 421
TSS +GC T + S ++ S* +TEWI
Sbjct: 181 TSSHRGCMGACTTSARSTGTRRSS*LKTEWI 273
Score = 82.2 bits (173), Expect(2) = 7e-045
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = -3 / -1
Query: 627 GRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQV 448
G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG QL+EVA VE P V QV
Sbjct: 480 GAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQLAEVAPVEPDPRRVPQV 301
Query: 447 LATSQ 433
L +
Sbjct: 300 LVARE 286
Score = 61.1 bits (127), Expect(2) = 3e-032
Identities = 31/59 (52%), Positives = 35/59 (59%)
Frame = +3 / +3
Query: 444 PVPARHHKGAILQRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQ 620
PVPA H +G +L LP+ AEE H VSP QL V VRL VQV +RLRRLQ
Sbjct: 297 PVPAGHDEGPVLPELPQRAEEGHRRWRQRSRLLRVVSPXQL*VDVRLLVQVRHRLRRLQ 473
Score = 38.6 bits (78), Expect(2) = 2e-022
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2 / +2
Query: 446 STCTTPQGCNSTKATSLS*GKPSMTAPTWLA 538
STC T +G ST ATS S* +PS APT+ A
Sbjct: 299 STCGTRRGSGSTGATSAS*RRPSTVAPTFSA 391
>gb|AV921410.1|AV921410 AV921410 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23f10 3', mRNA sequence
Length = 586
Score = 299 bits (648), Expect = 1e-080
Identities = 113/144 (78%), Positives = 127/144 (88%)
Frame = +1 / -1
Query: 250 SADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPG 429
SADWQV Y ERNGKPIGP+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG
Sbjct: 586 SADWQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPG 407
Query: 430 NLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVY 609
LTR QYL DTTRV+FY+ YL+EL+KAID GA+V GYFAWSLLDNFEW SGY+SKFGIVY
Sbjct: 406 GLTRDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVY 227
Query: 610 VDFSTPKLERHPKASAYWFRDMLQ 681
VDF++P L+RHPKASAYWFRD+L+
Sbjct: 226 VDFNSPNLDRHPKASAYWFRDLLR 155
Score = 224 bits (484), Expect = 5e-058
Identities = 107/140 (76%), Positives = 109/140 (77%)
Frame = -1 / +3
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 165 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 344
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 345 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 524
Query: 311 ACGPIGLPFRSKTY*TCQSA 252
A GPIGLPF SK TCQSA
Sbjct: 525 AFGPIGLPFLSKA*VTCQSA 584
Score = 173 bits (373), Expect = 9e-043
Identities = 78/143 (54%), Positives = 100/143 (69%)
Frame = -3 / +2
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 158 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 337
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 338 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 517
Query: 318 *IRLWSDRFAVPF*NILNLPIS* 250
IRLWS+R A+ I NLPI *
Sbjct: 518 RIRLWSNRLAISLKGIGNLPIG* 586
Score = 132 bits (283), Expect = 2e-030
Identities = 68/138 (49%), Positives = 83/138 (60%)
Frame = +3 / -3
Query: 258 LAGSICFRTERQTDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLD 437
LAG +C + Q D T GEF++ALHRP DV + L + +V + HN +RNGSA
Sbjct: 578 LAGYLCL*EKWQADWTKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAH 399
Query: 438 SWPVPARHHKGAILQRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRL 617
+ PVPA H +G +L LP+ AEE H VSPRQL V VRL VQV +RLRRL
Sbjct: 398 ARPVPAGHDEGPVLPELPQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRL 219
Query: 618 QHAQARTTPQGVSLLVQR 671
Q Q + PQGV LLVQR
Sbjct: 218 QQPQPGSAPQGVGLLVQR 165
Score = 71.2 bits (149), Expect(2) = 3e-027
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +1
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 166 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 288
Score = 70.7 bits (148), Expect(2) = 3e-027
Identities = 35/80 (43%), Positives = 46/80 (57%)
Frame = -2 / +1
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 346 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 525
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+V+S C +H PAN+L
Sbjct: 526 PLVQSACHFSQRHR*PANRL 585
>gb|AV912838.1|AV912838 AV912838 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10i17 5', mRNA sequence
Length = 603
Score = 231 bits (499), Expect(3) = 2e-080
Identities = 91/116 (78%), Positives = 97/116 (83%)
Frame = +1 / +2
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K PKFTP +AK+V GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGK
Sbjct: 254 KERLPKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGK 433
Query: 295 PIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDT 462
PIGP+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DT
Sbjct: 434 PIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDT 601
Score = 183 bits (395), Expect(3) = 3e-059
Identities = 85/117 (72%), Positives = 89/117 (76%)
Frame = -1 / -1
Query: 464 VVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPF 285
VVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEFA GPIGLPF
Sbjct: 603 VVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLPF 424
Query: 284 RSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLGQPLF 114
SK TCQSAE*LVG C S+FWPF LAVY*LIP+*SAEP+T LA +GVNLG F
Sbjct: 423 LSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIPI*SAEPMTILASAGVNLGNLSF 253
Score = 135 bits (289), Expect(3) = 1e-043
Identities = 59/111 (53%), Positives = 77/111 (69%)
Frame = -3 / -3
Query: 459 VVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAVPF 280
V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+ IRLWS+R A+
Sbjct: 598 VPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAISL 419
Query: 279 *NILNLPIS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLRSKLG 127
I NLPI *+A R LL+QFLALH AS VLIDPN++R A D S RS+LG
Sbjct: 418 KGIGNLPIG*IAGRRLLQQFLALHEASCVLIDPNIVRGAHDHFSFSRSELG 266
Score = 111 bits (236), Expect(3) = 6e-036
Identities = 56/116 (48%), Positives = 72/116 (62%)
Frame = +3 / +1
Query: 114 KERLPQVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQ 293
+ + QV+S S* G GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q
Sbjct: 253 EREVAQVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQ 432
Query: 294 TDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARH 461
D T GEF++ALHRP DV + L + +V + HN +RNGSA + PVPA H
Sbjct: 433 ADWTKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGH 600
Score = 101 bits (215), Expect(3) = 1e-029
Identities = 55/115 (47%), Positives = 67/115 (58%)
Frame = +2 / +3
Query: 116 REAAPSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTAN 295
+ PS L KL WS A R LGSI+T LA+*RARNC SR A Q IGR M A+
Sbjct: 255 KRGCPSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMAS 434
Query: 296 RSDHRRIQSGFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTT 460
R D RRI++G TSS +GC T + S ++ S* +TEWIS+ STC T
Sbjct: 435 RLDQRRIRTGSTSSHRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGT 599
Score = 60.6 bits (126), Expect(3) = 2e-080
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +2 / +2
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NSTEDQAAAQRARDFHVGWF DPL
Sbjct: 143 NSTEDQAAAQRARDFHVGWFVDPL 214
Score = 46.9 bits (96), Expect(3) = 2e-080
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +2
Query: 75 INGHYPQIMQDIVKERLPQ 131
INGHYPQIMQD+VKERLP+
Sbjct: 215 INGHYPQIMQDLVKERLPK 271
Score = 46.0 bits (94), Expect(3) = 3e-059
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1 / -3
Query: 131 LGQPLFHNILHYLWIMSIY 75
LGQPLFH +LHYLW+M +Y
Sbjct: 271 LGQPLFHKVLHYLWVMPVY 215
Score = 44.6 bits (91), Expect(3) = 6e-036
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / +1
Query: 1 KLNRRPSSGSKSKGFPCWLVC 63
+LN RPSS SKS+G PCWLVC
Sbjct: 142 QLN*RPSSSSKSQGLPCWLVC 204
Score = 42.3 bits (86), Expect(3) = 1e-043
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2 / -1
Query: 127 GSLSFTISCIICG*CPFI 74
G+LSFT SCIICG*CPFI
Sbjct: 267 GNLSFTRSCIICG*CPFI 214
Score = 37.7 bits (76), Expect(3) = 3e-059
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -3 / -1
Query: 72 NGSANQPTWKSXXXXXXAWSSVE 4
+GS NQPTWKS AWSSVE
Sbjct: 213 SGSTNQPTWKSLAL*AAAWSSVE 145
Score = 37.3 bits (75), Expect(3) = 1e-043
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 67 ISKPTNMEIPCSLSRCLVFG*V 2
+ KP NME+P SLS CLVF *V
Sbjct: 208 VDKPANMEVPGSLSCCLVFS*V 143
Score = 34.5 bits (69), Expect(3) = 1e-029
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 3 TQPKTKQRLKEQGISMLVGL 62
TQ KTKQ+LKE G SML GL
Sbjct: 144 TQLKTKQQLKEPGTSMLAGL 203
Score = 33.6 bits (67), Expect(3) = 6e-036
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 85 IIHR*CKIL*KRGCP 129
I HR*CK L*KRGCP
Sbjct: 225 ITHR*CKTL*KRGCP 269
Score = 31.8 bits (63), Expect(3) = 1e-029
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2 / +1
Query: 68 PLNKWTLSTDNARYCEREAA 127
P +K L TDNAR CERE A
Sbjct: 208 PADKRALPTDNARPCEREVA 267
>gb|CA028155.1|CA028155 HZ61C14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61C14
5-PRIME, mRNA sequence
Length = 608
Score = 297 bits (644), Expect = 4e-080
Identities = 112/143 (78%), Positives = 126/143 (88%)
Frame = +1 / +3
Query: 253 ADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGN 432
ADWQV Y ERNGKPIGP+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG
Sbjct: 3 ADWQVTYAFERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGG 182
Query: 433 LTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYV 612
LTR QYL DTTRV+FY+ YL+EL+KAID GA+V GYFAWSLLDNFEW SGY+SKFGIVYV
Sbjct: 183 LTRDQYLRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYV 362
Query: 613 DFSTPKLERHPKASAYWFRDMLQ 681
DF++P L+RHPKASAYWFRD+L+
Sbjct: 363 DFNSPNLDRHPKASAYWFRDLLR 431
Score = 224 bits (484), Expect = 5e-058
Identities = 107/140 (76%), Positives = 109/140 (77%)
Frame = -1 / -2
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 421 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 242
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 241 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 62
Query: 311 ACGPIGLPFRSKTY*TCQSA 252
A GPIGLPF SK TCQSA
Sbjct: 61 AFGPIGLPFLSKA*VTCQSA 2
Score = 171 bits (367), Expect = 6e-042
Identities = 76/141 (53%), Positives = 98/141 (69%)
Frame = -3 / -1
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 428 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 249
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 248 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 69
Query: 318 *IRLWSDRFAVPF*NILNLPI 256
IRLW +R A+ I NLPI
Sbjct: 68 RIRLWPNRLAISLKGIGNLPI 6
Score = 130 bits (278), Expect = 1e-029
Identities = 67/138 (48%), Positives = 82/138 (59%)
Frame = +3 / +2
Query: 258 LAGSICFRTERQTDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLD 437
LAG +C + Q D GEF++ALHRP DV + L + +V + HN +RNGSA
Sbjct: 8 LAGYLCL*EKWQADWAKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAH 187
Query: 438 SWPVPARHHKGAILQRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRL 617
+ PVPA H +G +L LP+ AEE H VSPRQL V VRL VQV +RLRRL
Sbjct: 188 ARPVPAGHDEGPVLPELPQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRL 367
Query: 618 QHAQARTTPQGVSLLVQR 671
Q Q + PQGV LLVQR
Sbjct: 368 QQPQPGSAPQGVGLLVQR 421
Score = 71.2 bits (149), Expect(2) = 1e-026
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / -3
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 420 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 298
Score = 68.9 bits (144), Expect(2) = 1e-026
Identities = 34/80 (42%), Positives = 45/80 (56%)
Frame = -2 / -3
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 240 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 61
Query: 310 PVVRSVCRSVLKHIEPANQL 251
P+ +S C +H PAN+L
Sbjct: 60 PLAQSACHFSQRHR*PANRL 1
>gb|AV915968.1|AV915968 AV915968 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16o12 5', mRNA sequence
Length = 494
Score = 258 bits (558), Expect(3) = 4e-076
Identities = 99/139 (71%), Positives = 116/139 (83%)
Frame = +1 / +2
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K P FTPEQ+KLVKGS DYIGINQYTA+Y+ Q LQQ PTSYS+DW VQY+ +RNG
Sbjct: 74 KERLPSFTPEQSKLVKGSVDYIGINQYTATYMADQPTLQQPPTSYSSDWHVQYIFQRNGV 253
Query: 295 PIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQ 474
PIG +ANS WLYIVP GMYGCVNY++ KY NPT+ I+ENGMDQP NLTR ++LHD +RV+
Sbjct: 254 PIGQKANSNWLYIVPTGMYGCVNYIREKYNNPTIIISENGMDQPANLTREEFLHDASRVE 433
Query: 475 FYKGYLAELRKAIDDGADV 531
FYK YLAEL+KAIDDGA+V
Sbjct: 434 FYKTYLAELKKAIDDGANV 490
Score = 186 bits (400), Expect(3) = 7e-051
Identities = 91/139 (65%), Positives = 96/139 (69%)
Frame = -1 / -3
Query: 530 TSAPSSMAFLSSAR*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQP 351
T APSS+AF SSAR* L*N TL SCR RV+F G*SIPFS + VG Y *FT P
Sbjct: 489 TFAPSSIAFFSSAR*VL*NSTLEASCRNSSRVRFAG*SIPFSDIMIVGLLYFSLM*FTHP 310
Query: 350 YIPSGTM*SHFEFACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*S 171
Y+P GTM*S EFA PIG PFR Y*TCQS E*LVG CWS W *+AVY* IPM*S
Sbjct: 309 YMPVGTM*SQLEFAFCPIGTPFR*NIY*TCQSDE*LVGGCWSVGWSAM*VAVY*FIPM*S 130
Query: 170 AEPLTNLACSGVNLGQPLF 114
EPLTNL CSGV LG F
Sbjct: 129 TEPLTNLDCSGVKLGNLSF 73
Score = 147 bits (316), Expect(3) = 3e-036
Identities = 69/131 (52%), Positives = 87/131 (66%)
Frame = -3 / -2
Query: 531 HVGAVIDGFPQLSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTT 352
HV AV+D QL EV VEL P GVVQ L QV LIHSV GY + + +L+ +VHT+
Sbjct: 490 HVRAVVDRLLQLGEVGLVELDPRGVVQELLAGQVRGLIHSVFGYNDRRVVVLLPYVVHTS 311
Query: 351 VHPFWDDVKPL*IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLIDPNVI 172
+H WDDVKP+ +RL S+R+A+ ILN+P+ *VA LLE++L HV +LI PNVI
Sbjct: 310 IHACWDDVKPIGVRLLSNRYAISLKYILNMPVR*VACWWLLERWLVCHVGRCILIYPNVI 131
Query: 171 R*ALDQLSLLR 139
ALDQL L R
Sbjct: 130 YRALDQLRLFR 98
Score = 120 bits (257), Expect(3) = 5e-029
Identities = 59/119 (49%), Positives = 76/119 (63%)
Frame = +3 / +1
Query: 150 *VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTTGEFKVAL 329
*VGQGL LHWD+S++ L P APA LL *LA SI + +TD T GE ++AL
Sbjct: 109 *VGQGLCRLHWDKSVYSDLHGRPTNAPATTNKLLI*LACSIYISAKWRTDWTEGELQLAL 288
Query: 330 HRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRLPR*AEE 506
HRP R V +CEL + +V + + + R+RNGS R+ D VPAR +G +LQ LPR AEE
Sbjct: 289 HRPNRHVWMCELHKGEVQQPDDHYIRKRNGSTREPDPRGVPARRLEGRVLQDLPRRAEE 465
Score = 116 bits (247), Expect = 2e-025
Identities = 61/130 (46%), Positives = 77/130 (59%)
Frame = +2 / +3
Query: 143 SKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDHRRIQS 322
+ LSWSRA ITLG I+ T + SS AT L G FN++ + A R D RR
Sbjct: 102 NNLSWSRAL*ITLG*ISIQRPTWQTNQRSSNHQQATHLTGMFNIYFSEMAYRLDRRRTPI 281
Query: 323 GFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKATSLS* 502
GFTSSQ+ C V*T * S ++ P+TEWI+ T* S+CTTP+G +ST+ TS S*
Sbjct: 282 GFTSSQQACMDV*TT*GRSTTTRRSLYPKTEWINPRT*PARSSCTTPRGSSSTRPTSPS* 461
Query: 503 GKPSMTAPTW 532
+ S TA TW
Sbjct: 462 RRRSTTARTW 491
Score = 38.6 bits (78), Expect(3) = 4e-076
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 75 INGHYPQIMQDIVKERLP 128
+NG YP+ MQDIVKERLP
Sbjct: 35 LNGQYPKTMQDIVKERLP 88
Score = 28.6 bits (56), Expect(3) = 7e-051
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2 / -3
Query: 127 GSLSFTISCIICG*CPF 77
G+LSFTISC++ G PF
Sbjct: 87 GNLSFTISCMVFGY*PF 37
Score = 27.2 bits (53), Expect(3) = 4e-076
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / +3
Query: 44 FHVGWFADP 70
FHVGWF DP
Sbjct: 6 FHVGWFLDP 32
Score = 25.8 bits (50), Expect(3) = 5e-029
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +2 / +1
Query: 77 KWTLSTDNARYCERE 121
KW++ D+ARY +RE
Sbjct: 37 KWSIPEDHARYSKRE 81
Score = 24.9 bits (48), Expect(3) = 7e-051
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / -2
Query: 69 GSANQPTWK 43
GS NQPTWK
Sbjct: 31 GSRNQPTWK 5
Score = 23.1 bits (44), Expect(3) = 3e-036
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -1 / -3
Query: 68 DQQTNQHGN 42
DQ+TNQHG+
Sbjct: 30 DQETNQHGS 4
Score = 21.7 bits (41), Expect(3) = 3e-036
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1 / -2
Query: 122 PLFHNILHYLWIMSI 78
PLF+ ILH L +++I
Sbjct: 82 PLFYYILHGLRVLTI 38
Score = 21.7 bits (41), Expect(3) = 5e-029
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 46 PCWLVC*SI 72
PCWLV *S+
Sbjct: 8 PCWLVS*SL 34
>gb|BM375888.2|BM375888 EBem06_SQ004_L04_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ004_L04 5', mRNA sequence
Length = 487
Score = 283 bits (612), Expect = 1e-075
Identities = 106/137 (77%), Positives = 122/137 (89%)
Frame = +1 / +2
Query: 271 YVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQY 450
+ +ERNGKPIGP+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG LTR QY
Sbjct: 2 FAVERNGKPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQY 181
Query: 451 LHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
L DTTRV+FY+ YL+EL+KAID GA+V GYFAWSLLDNFEW SGY+SKFGIVYVDF++P
Sbjct: 182 LRDTTRVRFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNSPN 361
Query: 631 LERHPKASAYWFRDMLQ 681
L+RHPKASAYWFRD+L+
Sbjct: 362 LDRHPKASAYWFRDLLR 412
Score = 213 bits (460), Expect = 9e-055
Identities = 101/131 (77%), Positives = 103/131 (78%)
Frame = -1 / -2
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 402 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 223
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 222 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 43
Query: 311 ACGPIGLPFRS 279
A GPIGLPF S
Sbjct: 42 AFGPIGLPFLS 10
Score = 166 bits (356), Expect = 2e-040
Identities = 72/131 (54%), Positives = 94/131 (71%)
Frame = -3 / -1
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 409 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 230
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 229 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 50
Query: 318 *IRLWSDRFAV 286
IRLWS+R A+
Sbjct: 49 RIRLWSNRLAI 17
Score = 125 bits (267), Expect = 4e-028
Identities = 64/127 (50%), Positives = 77/127 (60%)
Frame = +3 / +1
Query: 291 QTDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKG 470
Q D T GEF++ALHRP DV + L + +V + HN +RNGSA + PVPA H +G
Sbjct: 22 QADWTKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEG 201
Query: 471 AILQRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQG 650
+L LP+ AEE H VSPRQL V VRL VQV +RLRRLQ Q + PQG
Sbjct: 202 PVLPELPQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQG 381
Query: 651 VSLLVQR 671
V LLVQR
Sbjct: 382 VGLLVQR 402
Score = 71.2 bits (149), Expect(2) = 1e-024
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / -3
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 401 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 279
Score = 62.0 bits (129), Expect(2) = 1e-024
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = -2 / -3
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 221 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 42
Query: 310 PVVRSVC 290
P+V+S C
Sbjct: 41 PLVQSAC 21
>gb|BQ755347.1|BQ755347 EBed07_SQ002_J07_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ002_J07 5', mRNA sequence
Length = 642
Score = 268 bits (580), Expect(2) = 5e-074
Identities = 101/166 (60%), Positives = 131/166 (78%)
Frame = +1 / +3
Query: 133 FTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQA 312
F+ +++++VKGS DY+GINQYT+ Y+K Q P SY DW V +V ERNG PIGP+A
Sbjct: 6 FSADESRMVKGSIDYVGINQYTSYYMKDPGAWNQTPVSYQDDWHVGFVYERNGVPIGPRA 185
Query: 313 NSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYL 492
NS WLYIVP GM V Y+K +YGNPT+ ++ENGMDQPGN++ +HDT R+++Y+ Y+
Sbjct: 186 NSDWLYIVPWGMNKAVTYVKERYGNPTMILSENGMDQPGNVSIADGVHDTVRIRYYRDYI 365
Query: 493 AELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
EL+KAID+GA VAGYFAWSLLDNFEW+ GYT++FGIVYVDF+T K
Sbjct: 366 TELKKAIDNGARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFNTLK 503
Score = 171 bits (367), Expect(2) = 1e-043
Identities = 95/163 (58%), Positives = 103/163 (63%)
Frame = -1 / -3
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
VLKST*T+P V*P HSKLS RDQAK PAT AP S+AFLSS * L* L VSC
Sbjct: 496 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*SL*YRILTVSCTPS 317
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
+ FPG SIPFS VGFPYL * T +IP GTM*S EFA GPIG PFRS T T
Sbjct: 316 AMLTFPGWSIPFSESIIVGFPYLSLT*VTALFIPHGTM*SQSEFARGPIGTPFRS*TNPT 137
Query: 263 CQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGV 135
CQS+ *L G + + F * VY LIP *S EP T L S +
Sbjct: 136 CQSSW*LTGVWFHAPGSFM**EVYWLIPT*SMEPFTILDSSAL 8
Score = 111 bits (236), Expect = 7e-024
Identities = 58/159 (36%), Positives = 87/159 (54%)
Frame = -3 / -2
Query: 618 EVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQVLAT 439
EV +DD++ G V PLEVV++RPS+V SH GA++ +L V V P VV ++
Sbjct: 491 EVHIDDAETGSVAESPLEVVKQRPSKVPSHSGAIVYRLLELGYVVSVVPDPYCVVHTVSD 312
Query: 438 SQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NILNLP 259
+ +SWL+HS+ + ISI I H+ VH +VKP+ + S+R + F + N+P
Sbjct: 311 ADISWLVHSIFRKYHRRISISFFNIGHSLVHSPRHNVKPVGVCTRSNRHTISFIDKPNMP 132
Query: 258 IS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLL 142
I V R L+ LHV VL+D N++ A L+
Sbjct: 131 IILVTDRRLVPCPRILHVVRSVLVDTNIVNGAFHHSGLI 15
Score = 29.9 bits (59), Expect(2) = 5e-074
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1 / +3
Query: 631 LERHPKASAYWFRDMLQK 684
L+R+PK SA WF++ML +
Sbjct: 498 LKRYPKDSALWFKNMLSE 551
Score = 25.8 bits (50), Expect(2) = 1e-043
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3 / -2
Query: 687 VFLEHVSEPVG*RLGVSFELGRAEVD 610
+F EHV EP G* LGV + +D
Sbjct: 554 LFGEHVLEPQG*VLGVPLQSIEVHID 477
>gb|BU986792.1|BU986792 HF12O16r HF Hordeum vulgare subsp. vulgare cDNA clone HF12O16
5-PRIME, mRNA sequence
Length = 615
Score = 268 bits (580), Expect(2) = 5e-074
Identities = 101/166 (60%), Positives = 131/166 (78%)
Frame = +1 / +1
Query: 133 FTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQA 312
F+ +++++VKGS DY+GINQYT+ Y+K Q P SY DW V +V ERNG PIGP+A
Sbjct: 16 FSADESRMVKGSIDYVGINQYTSYYMKDPGAWNQTPVSYQDDWHVGFVYERNGVPIGPRA 195
Query: 313 NSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYL 492
NS WLYIVP GM V Y+K +YGNPT+ ++ENGMDQPGN++ +HDT R+++Y+ Y+
Sbjct: 196 NSDWLYIVPWGMNKAVTYVKERYGNPTMILSENGMDQPGNVSIADGVHDTVRIRYYRDYI 375
Query: 493 AELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
EL+KAID+GA VAGYFAWSLLDNFEW+ GYT++FGIVYVDF+T K
Sbjct: 376 TELKKAIDNGARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFNTLK 513
Score = 171 bits (367), Expect(2) = 1e-043
Identities = 95/163 (58%), Positives = 103/163 (63%)
Frame = -1 / -2
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
VLKST*T+P V*P HSKLS RDQAK PAT AP S+AFLSS * L* L VSC
Sbjct: 506 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*SL*YRILTVSCTPS 327
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
+ FPG SIPFS VGFPYL * T +IP GTM*S EFA GPIG PFRS T T
Sbjct: 326 AMLTFPGWSIPFSESIIVGFPYLSLT*VTALFIPHGTM*SQSEFARGPIGTPFRS*TNPT 147
Query: 263 CQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGV 135
CQS+ *L G + + F * VY LIP *S EP T L S +
Sbjct: 146 CQSSW*LTGVWFHAPGSFM**EVYWLIPT*SMEPFTILDSSAL 18
Score = 111 bits (236), Expect = 7e-024
Identities = 58/159 (36%), Positives = 87/159 (54%)
Frame = -3 / -1
Query: 618 EVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQVLAT 439
EV +DD++ G V PLEVV++RPS+V SH GA++ +L V V P VV ++
Sbjct: 501 EVHIDDAETGSVAESPLEVVKQRPSKVPSHSGAIVYRLLELGYVVSVVPDPYCVVHTVSD 322
Query: 438 SQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NILNLP 259
+ +SWL+HS+ + ISI I H+ VH +VKP+ + S+R + F + N+P
Sbjct: 321 ADISWLVHSIFRKYHRRISISFFNIGHSLVHSPRHNVKPVGVCTRSNRHTISFIDKPNMP 142
Query: 258 IS*VASRLLLEQFLALHVASGVLIDPNVIR*ALDQLSLL 142
I V R L+ LHV VL+D N++ A L+
Sbjct: 141 IILVTDRRLVPCPRILHVVRSVLVDTNIVNGAFHHSGLI 25
Score = 29.9 bits (59), Expect(2) = 5e-074
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1 / +1
Query: 631 LERHPKASAYWFRDMLQK 684
L+R+PK SA WF++ML +
Sbjct: 508 LKRYPKDSALWFKNMLSE 561
Score = 25.8 bits (50), Expect(2) = 1e-043
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3 / -1
Query: 687 VFLEHVSEPVG*RLGVSFELGRAEVD 610
+F EHV EP G* LGV + +D
Sbjct: 564 LFGEHVLEPQG*VLGVPLQSIEVHID 487
>gb|BQ764926.1|BQ764926 EBca01_SQ005_E07_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_E07 5', mRNA sequence
Length = 715
Score = 204 bits (441), Expect(3) = 1e-072
Identities = 80/102 (78%), Positives = 86/102 (84%)
Frame = +1 / +1
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K PKFTP +AK+V GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGK
Sbjct: 409 KERLPKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGK 588
Query: 295 PIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
PIGP+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMD
Sbjct: 589 PIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMD 714
Score = 160 bits (345), Expect(3) = 2e-052
Identities = 74/102 (72%), Positives = 78/102 (76%)
Frame = -1 / -3
Query: 419 SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*TCQSAE*LV 240
SIPFSVM GFPY R* T PYIP GTM*S FEFA GPIGLPF SK TCQSAE*LV
Sbjct: 713 SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LV 534
Query: 239 GFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLGQPLF 114
G C S+FWPF LAVY*LIP+*SAEP+T LA +GVNLG F
Sbjct: 533 GVCCSNFWPFMRLAVY*LIPI*SAEPMTILASAGVNLGNLSF 408
Score = 128 bits (275), Expect(3) = 1e-041
Identities = 54/98 (55%), Positives = 71/98 (72%)
Frame = -3 / -2
Query: 420 IHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NILNLPIS*VAS 241
IHSV Y++ + +L+ ++VH +HP WDDV+P+ IRLWS+R A+ I NLPI *+A
Sbjct: 714 IHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPVRIRLWSNRLAISLKGIGNLPIG*IAG 535
Query: 240 RLLLEQFLALHVASGVLIDPNVIR*ALDQLSLLRSKLG 127
R LL+QFLALH AS VLIDPN++R A D S RS+LG
Sbjct: 534 RRLLQQFLALHEASCVLIDPNIVRGAHDHFSFSRSELG 421
Score = 98.2 bits (208), Expect(3) = 3e-032
Identities = 49/102 (48%), Positives = 64/102 (62%)
Frame = +3 / +3
Query: 114 KERLPQVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQ 293
+ + QV+S S* G GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q
Sbjct: 408 EREVAQVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQ 587
Query: 294 TDRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNG 419
D T GEF++ALHRP DV + L + +V + HN +RNG
Sbjct: 588 ADWTKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNG 713
Score = 94.1 bits (199), Expect(3) = 2e-027
Identities = 50/102 (49%), Positives = 61/102 (59%)
Frame = +2 / +2
Query: 116 REAAPSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTAN 295
+ PS L KL WS A R LGSI+T LA+*RARNC SR A Q IGR M A+
Sbjct: 410 KRGCPSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMAS 589
Query: 296 RSDHRRIQSGFTSSQKGCTVV*TI*STSMEIQQFS*PRTEWI 421
R D RRI++G TSS +GC T + S ++ S* +TEWI
Sbjct: 590 RLDQRRIRTGSTSSHRGCMGACTTSARSTGTRRSS*LKTEWI 715
Score = 60.6 bits (126), Expect(3) = 1e-072
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +2 / +1
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NSTEDQAAAQRARDFHVGWF DPL
Sbjct: 298 NSTEDQAAAQRARDFHVGWFVDPL 369
Score = 46.9 bits (96), Expect(3) = 1e-072
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +1
Query: 75 INGHYPQIMQDIVKERLPQ 131
INGHYPQIMQD+VKERLP+
Sbjct: 370 INGHYPQIMQDLVKERLPK 426
Score = 46.0 bits (94), Expect(3) = 2e-052
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1 / -2
Query: 131 LGQPLFHNILHYLWIMSIY 75
LGQPLFH +LHYLW+M +Y
Sbjct: 426 LGQPLFHKVLHYLWVMPVY 370
Score = 44.6 bits (91), Expect(3) = 3e-032
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / +3
Query: 1 KLNRRPSSGSKSKGFPCWLVC 63
+LN RPSS SKS+G PCWLVC
Sbjct: 297 QLN*RPSSSSKSQGLPCWLVC 359
Score = 42.3 bits (86), Expect(3) = 1e-041
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2 / -3
Query: 127 GSLSFTISCIICG*CPFI 74
G+LSFT SCIICG*CPFI
Sbjct: 422 GNLSFTRSCIICG*CPFI 369
Score = 37.7 bits (76), Expect(3) = 2e-052
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -3 / -3
Query: 72 NGSANQPTWKSXXXXXXAWSSVE 4
+GS NQPTWKS AWSSVE
Sbjct: 368 SGSTNQPTWKSLAL*AAAWSSVE 300
Score = 37.3 bits (75), Expect(3) = 1e-041
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 67 ISKPTNMEIPCSLSRCLVFG*V 2
+ KP NME+P SLS CLVF *V
Sbjct: 363 VDKPANMEVPGSLSCCLVFS*V 298
Score = 34.5 bits (69), Expect(3) = 2e-027
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +2
Query: 3 TQPKTKQRLKEQGISMLVGL 62
TQ KTKQ+LKE G SML GL
Sbjct: 299 TQLKTKQQLKEPGTSMLAGL 358
Score = 33.6 bits (67), Expect(3) = 3e-032
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 85 IIHR*CKIL*KRGCP 129
I HR*CK L*KRGCP
Sbjct: 380 ITHR*CKTL*KRGCP 424
Score = 31.8 bits (63), Expect(3) = 2e-027
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2 / +3
Query: 68 PLNKWTLSTDNARYCEREAA 127
P +K L TDNAR CERE A
Sbjct: 363 PADKRALPTDNARPCEREVA 422
>gb|BJ468274.1|BJ468274 BJ468274 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37p13 3', mRNA sequence
Length = 523
Score = 271 bits (586), Expect = 4e-072
Identities = 102/130 (78%), Positives = 116/130 (89%)
Frame = +1 / -1
Query: 292 KPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRV 471
KPIGP+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV
Sbjct: 523 KPIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRV 344
Query: 472 QFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKA 651
+FY+ YL+EL+KAID GA+V GYFAWSLLDNFEW SGY+SKFGIVYVDF++P L+RHPKA
Sbjct: 343 RFYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKA 164
Query: 652 SAYWFRDMLQ 681
SAYWFRD+L+
Sbjct: 163 SAYWFRDLLR 134
Score = 204 bits (441), Expect = 4e-052
Identities = 97/126 (76%), Positives = 99/126 (78%)
Frame = -1 / +3
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 144 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 323
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 324 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 503
Query: 311 ACGPIG 294
A GPIG
Sbjct: 504 AFGPIG 521
Score = 162 bits (349), Expect = 2e-039
Identities = 71/128 (55%), Positives = 92/128 (71%)
Frame = -3 / +2
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 137 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 316
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 317 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 496
Query: 318 *IRLWSDR 295
IRLWS+R
Sbjct: 497 RIRLWSNR 520
Score = 122 bits (262), Expect = 2e-027
Identities = 63/125 (50%), Positives = 76/125 (60%)
Frame = +3 / -3
Query: 297 DRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAI 476
D T GEF++ALHRP DV + L + +V + HN +RNGSA + PVPA H +G +
Sbjct: 518 DWTKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPV 339
Query: 477 LQRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGVS 656
L LP+ AEE H VSPRQL V VRL VQV +RLRRLQ Q + PQGV
Sbjct: 338 LPELPQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGVG 159
Query: 657 LLVQR 671
LLVQR
Sbjct: 158 LLVQR 144
Score = 71.2 bits (149), Expect(2) = 2e-023
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +1
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 145 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 267
Score = 57.9 bits (120), Expect(2) = 2e-023
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = -2 / +1
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 325 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 504
Query: 310 PVVRS 296
P+V+S
Sbjct: 505 PLVQS 519
>gb|AV915505.1|AV915505 AV915505 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14n06 5', mRNA sequence
Length = 641
Score = 153 bits (329), Expect(4) = 5e-072
Identities = 61/77 (79%), Positives = 65/77 (84%)
Frame = +1 / +2
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K PKFTP +AK+V GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGK
Sbjct: 293 KERLPKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGK 472
Query: 295 PIGPQANSKWLYIVPEG 345
PIGP+ANS WLYIVP G
Sbjct: 473 PIGPKANSNWLYIVPSG 523
Score = 124 bits (265), Expect(4) = 2e-050
Identities = 57/77 (74%), Positives = 61/77 (79%)
Frame = -1 / -3
Query: 344 PSGTM*SHFEFACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAE 165
P GTM*S FEFA GPIGLPF SK TCQSAE*LVG C S+FWPF LAVY*LIP+*SAE
Sbjct: 522 PDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIPI*SAE 343
Query: 164 PLTNLACSGVNLGQPLF 114
P+T LA +GVNLG F
Sbjct: 342 PMTILASAGVNLGNLSF 292
Score = 101 bits (215), Expect(4) = 2e-036
Identities = 45/73 (61%), Positives = 54/73 (73%)
Frame = -3 / -2
Query: 345 PFWDDVKPL*IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLIDPNVIR* 166
P WDDV+P+ IRLWS+R A+ I NLPI *+A R LL+QFLALH AS VLIDPN++R
Sbjct: 523 PRWDDVEPVRIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLIDPNIVRG 344
Query: 165 ALDQLSLLRSKLG 127
A D S RS+LG
Sbjct: 343 AHDHFSFSRSELG 305
Score = 84.9 bits (179), Expect(3) = 3e-028
Identities = 40/75 (53%), Positives = 50/75 (66%)
Frame = +3 / +1
Query: 114 KERLPQVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQ 293
+ + QV+S S* G GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q
Sbjct: 292 EREVAQVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQ 471
Query: 294 TDRTTGEFKVALHRP 338
D T GEF++ALHRP
Sbjct: 472 ADWTKGEFELALHRP 516
Score = 80.3 bits (169), Expect(3) = 2e-023
Identities = 41/77 (53%), Positives = 48/77 (62%)
Frame = +2 / +3
Query: 116 REAAPSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTAN 295
+ PS L KL WS A R LGSI+T LA+*RARNC SR A Q IGR M A+
Sbjct: 294 KRGCPSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMAS 473
Query: 296 RSDHRRIQSGFTSSQKG 346
R D RRI++G TSS +G
Sbjct: 474 RLDQRRIRTGSTSSHRG 524
Score = 68.0 bits (142), Expect(4) = 5e-072
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = +1 / +1
Query: 343 GMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRG 444
G GCV+YL KYGNP + ITENGMDQPG LTRG
Sbjct: 523 GCMGCVHYLSQKYGNPPIVITENGMDQPGGLTRG 624
Score = 60.6 bits (126), Expect(4) = 5e-072
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +2 / +2
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NSTEDQAAAQRARDFHVGWF DPL
Sbjct: 182 NSTEDQAAAQRARDFHVGWFVDPL 253
Score = 47.8 bits (98), Expect(4) = 2e-050
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -1 / -1
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIP 342
PRV PG*SIPFSVM GFPY R* T P P
Sbjct: 623 PRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPIHP 522
Score = 46.9 bits (96), Expect(4) = 5e-072
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +2
Query: 75 INGHYPQIMQDIVKERLPQ 131
INGHYPQIMQD+VKERLP+
Sbjct: 254 INGHYPQIMQDLVKERLPK 310
Score = 46.0 bits (94), Expect(4) = 2e-050
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1 / -2
Query: 131 LGQPLFHNILHYLWIMSIY 75
LGQPLFH +LHYLW+M +Y
Sbjct: 310 LGQPLFHKVLHYLWVMPVY 254
Score = 44.6 bits (91), Expect(3) = 3e-028
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / +1
Query: 1 KLNRRPSSGSKSKGFPCWLVC 63
+LN RPSS SKS+G PCWLVC
Sbjct: 181 QLN*RPSSSSKSQGLPCWLVC 243
Score = 42.3 bits (86), Expect(4) = 2e-036
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2 / -3
Query: 127 GSLSFTISCIICG*CPFI 74
G+LSFT SCIICG*CPFI
Sbjct: 306 GNLSFTRSCIICG*CPFI 253
Score = 37.7 bits (76), Expect(4) = 2e-050
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -3 / -3
Query: 72 NGSANQPTWKSXXXXXXAWSSVE 4
+GS NQPTWKS AWSSVE
Sbjct: 252 SGSTNQPTWKSLAL*AAAWSSVE 184
Score = 37.3 bits (75), Expect(4) = 2e-036
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 67 ISKPTNMEIPCSLSRCLVFG*V 2
+ KP NME+P SLS CLVF *V
Sbjct: 247 VDKPANMEVPGSLSCCLVFS*V 182
Score = 34.5 bits (69), Expect(3) = 2e-023
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 3 TQPKTKQRLKEQGISMLVGL 62
TQ KTKQ+LKE G SML GL
Sbjct: 183 TQLKTKQQLKEPGTSMLAGL 242
Score = 33.6 bits (67), Expect(3) = 3e-028
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +3
Query: 85 IIHR*CKIL*KRGCP 129
I HR*CK L*KRGCP
Sbjct: 264 ITHR*CKTL*KRGCP 308
Score = 31.8 bits (63), Expect(3) = 2e-023
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2 / +1
Query: 68 PLNKWTLSTDNARYCEREAA 127
P +K L TDNAR CERE A
Sbjct: 247 PADKRALPTDNARPCEREVA 306
Score = 27.6 bits (54), Expect(4) = 2e-036
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -3 / -3
Query: 423 LIHSVLGYENCWISILVLQIVH 358
LIHSV Y++ + +L+ ++VH
Sbjct: 603 LIHSVFSYDDRRVPVLLAEVVH 538
>gb|BQ661453.1|BQ661453 HM03J01u HM Hordeum vulgare subsp. vulgare cDNA clone HM03J01
3-PRIME, mRNA sequence
Length = 561
Score = 269 bits (581), Expect = 2e-071
Identities = 101/129 (78%), Positives = 115/129 (89%)
Frame = +1 / -1
Query: 295 PIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQ 474
PIGP+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+
Sbjct: 561 PIGPKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVR 382
Query: 475 FYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKAS 654
FY+ YL+EL+KAID GA+V GYFAWSLLDNFEW SGY+SKFGIVYVDF++P L+RHPKAS
Sbjct: 381 FYRSYLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKAS 202
Query: 655 AYWFRDMLQ 681
AYWFRD+L+
Sbjct: 201 AYWFRDLLR 175
Score = 202 bits (435), Expect = 3e-051
Identities = 96/125 (76%), Positives = 98/125 (78%)
Frame = -1 / +2
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 185 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 364
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 365 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 544
Query: 311 ACGPI 297
A GPI
Sbjct: 545 AFGPI 559
Score = 158 bits (339), Expect = 5e-038
Identities = 69/128 (53%), Positives = 91/128 (71%)
Frame = -3 / +1
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDV+D++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 178 QKVSEPVGRRLGVPIQVGAVEVDVNDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 357
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 358 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 537
Query: 318 *IRLWSDR 295
IRLW +R
Sbjct: 538 RIRLWPNR 561
Score = 120 bits (257), Expect = 9e-027
Identities = 62/125 (49%), Positives = 75/125 (60%)
Frame = +3 / -3
Query: 297 DRTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAI 476
D GEF++ALHRP DV + L + +V + HN +RNGSA + PVPA H +G +
Sbjct: 559 DWAKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPV 380
Query: 477 LQRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGVS 656
L LP+ AEE H VSPRQL V VRL VQV +RLRRLQ Q + PQGV
Sbjct: 379 LPELPQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGVG 200
Query: 657 LLVQR 671
LLVQR
Sbjct: 199 LLVQR 185
Score = 69.8 bits (146), Expect(2) = 2e-022
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = -2 / +3
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRR+R +TWT + T+T+SCRGET
Sbjct: 186 L*TSRPTPWGADPGWGC*SRRKRCRTWTSSRTSTQSCRGET 308
Score = 56.1 bits (116), Expect(2) = 2e-022
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = -2 / +3
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 366 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 545
Query: 310 PVVRS 296
P+ +S
Sbjct: 546 PLAQS 560
>gb|BU984559.1|BU984559 HF04E16r HF Hordeum vulgare subsp. vulgare cDNA clone HF04E16
5-PRIME, mRNA sequence
Length = 590
Score = 257 bits (556), Expect(2) = 9e-071
Identities = 98/156 (62%), Positives = 122/156 (78%)
Frame = +1 / +2
Query: 163 GSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPE 342
GS DY+GINQYT+ Y+K Q P SY DW V +V ERNG PIGP+ANS WLYIVP
Sbjct: 2 GSIDYVGINQYTSYYMKDPGAWNQTPVSYQDDWHVGFVYERNGVPIGPRANSDWLYIVPW 181
Query: 343 GMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDG 522
GM V Y+K +YGNPT+ ++ENGMDQPGN++ +HDT R+++Y+ Y+ EL+KAID+G
Sbjct: 182 GMNKAVTYVKERYGNPTMILSENGMDQPGNVSIADGVHDTVRIRYYRDYITELKKAIDNG 361
Query: 523 ADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
A VAGYFAWSLLDNFEW+ GYT++FGIVYVDF+T K
Sbjct: 362 ARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFNTLK 469
Score = 167 bits (359), Expect(2) = 2e-042
Identities = 92/154 (59%), Positives = 99/154 (64%)
Frame = -1 / -3
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
VLKST*T+P V*P HSKLS RDQAK PAT AP S+AFLSS * L* L VSC
Sbjct: 462 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*SL*YRILTVSCTPS 283
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
+ FPG SIPFS VGFPYL * T +IP GTM*S EFA GPIG PFRS T T
Sbjct: 282 AMLTFPGWSIPFSESIIVGFPYLSLT*VTALFIPHGTM*SQSEFARGPIGTPFRS*TNPT 103
Query: 263 CQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEP 162
CQS+ *L G + + F * VY LIP *S EP
Sbjct: 102 CQSSW*LTGVWFHAPGSFM**EVYWLIPT*SMEP 1
Score = 109 bits (233), Expect = 2e-023
Identities = 56/149 (37%), Positives = 84/149 (56%)
Frame = -3 / -2
Query: 618 EVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQVLAT 439
EV +DD++ G V PLEVV++RPS+V SH GA++ +L V V P VV ++
Sbjct: 457 EVHIDDAETGSVAESPLEVVKQRPSKVPSHSGAIVYRLLELGYVVSVVPDPYCVVHTVSD 278
Query: 438 SQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NILNLP 259
+ +SWL+HS+ + ISI I H+ VH +VKP+ + S+R + F + N+P
Sbjct: 277 ADISWLVHSIFRKYHRRISISFFNIGHSLVHSPRHNVKPVGVCTRSNRHTISFIDKPNMP 98
Query: 258 IS*VASRLLLEQFLALHVASGVLIDPNVI 172
I V R L+ LHV VL+D N++
Sbjct: 97 IILVTDRRLVPCPRILHVVRSVLVDTNIV 11
Score = 29.9 bits (59), Expect(2) = 9e-071
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1 / +2
Query: 631 LERHPKASAYWFRDMLQK 684
L+R+PK SA WF++ML +
Sbjct: 464 LKRYPKDSALWFKNMLSE 517
Score = 25.8 bits (50), Expect(2) = 2e-042
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3 / -2
Query: 687 VFLEHVSEPVG*RLGVSFELGRAEVD 610
+F EHV EP G* LGV + +D
Sbjct: 520 LFGEHVLEPQG*VLGVPLQSIEVHID 443
>gb|BJ467618.1|BJ467618 BJ467618 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29b06 3', mRNA sequence
Length = 709
Score = 256 bits (553), Expect(2) = 3e-070
Identities = 96/168 (57%), Positives = 126/168 (75%)
Frame = +1 / -2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
P+F+ +++ ++KGS DY+GINQYT+ Y+K P SY DW V+++ ERNG PIG
Sbjct: 699 PRFSADESTMIKGSIDYVGINQYTSFYMKDTGTWNLTPVSYQDDWHVEFIYERNGVPIGA 520
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
ANS WLYIVP G+ V Y+K +YGNPT+ + ENGMDQPGN++ + DT RV++Y+
Sbjct: 519 HANSYWLYIVPWGINKAVTYVKERYGNPTMILAENGMDQPGNVSITDGVQDTVRVRYYRD 340
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
Y+ EL+KAIDDGA V GYFAWSLLDNFEW+ GYT++FGIVYVD+ T K
Sbjct: 339 YITELKKAIDDGARVIGYFAWSLLDNFEWRLGYTARFGIVYVDYKTLK 196
Score = 156 bits (336), Expect = 1e-037
Identities = 91/166 (54%), Positives = 98/166 (59%)
Frame = -1 / +2
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
VL ST*TIP V*P HSKLS RDQAK P T APSS+AFLSS * L* TL VSC
Sbjct: 203 VL*ST*TIPKRAV*PSLHSKLSSRDQAKYPITRAPSSIAFLSSVM*SL*YRTLTVSCTPS 382
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
+ FPG SIPFS VGFPYL * T IP GTM*S EFA PIG P RS T
Sbjct: 383 VMLTFPGWSIPFSARIIVGFPYLSLT*VTALLIPHGTM*SQ*EFAWAPIGTPLRS*INST 562
Query: 263 CQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAEPLTNLACSGVNLG 126
CQS+ *L G + F * VY LIP *S +P + S + G
Sbjct: 563 CQSSW*LTGVRFQVPVSFM*KEVYWLIPT*SMDPFIIVDSSALKRG 700
Score = 109 bits (233), Expect = 2e-023
Identities = 54/148 (36%), Positives = 83/148 (56%)
Frame = -3 / +1
Query: 615 VDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQLSEVAFVELHPCGVVQVLATS 436
V +D ++ G VT PLEVV++RPS++ H A+I +LS V V V+ ++ +
Sbjct: 211 VHIDYTETGSVTEPPLEVVKQRPSKIPDHPSAIIYRLLELSYVVSVVSDSDCVLHTVSDA 390
Query: 435 QVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NILNLPI 256
VS L+H V ++CWISI I H+ V W +VKP+ + + S+R A+ F + N+PI
Sbjct: 391 DVSRLVHPVFSKDHCWISISFFNIGHSLVDSPWYNVKPIGVCMGSNRHAITFIDKFNMPI 570
Query: 255 S*VASRLLLEQFLALHVASGVLIDPNVI 172
V R + LHV VL+D N++
Sbjct: 571 ILVTDRRQVPSPSVLHVERSVLVDTNIV 654
Score = 29.5 bits (58), Expect(2) = 3e-070
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1 / -2
Query: 631 LERHPKASAYWFRDML 678
L+R+PK SA WF++ML
Sbjct: 201 LKRYPKDSALWFKNML 154
>gb|BU994352.1|BU994352 HM06L21r HM Hordeum vulgare subsp. vulgare cDNA clone HM06L21
5-PRIME, mRNA sequence
Length = 644
Score = 161 bits (347), Expect(4) = 2e-068
Identities = 64/79 (81%), Positives = 68/79 (86%)
Frame = +1 / +1
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K PKFTP +AK+VKGSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGK
Sbjct: 337 KERLPKFTPAEAKMVKGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGK 516
Query: 295 PIGPQANSKWLYIVPEGMY 351
PIGP+ANS WLYIVP GMY
Sbjct: 517 PIGPKANSNWLYIVPSGMY 573
Score = 127 bits (273), Expect(4) = 1e-045
Identities = 59/79 (74%), Positives = 62/79 (78%)
Frame = -1 / -1
Query: 350 YIPSGTM*SHFEFACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*S 171
YIP GTM*S FEFA GPIGLPF SK TCQSAE*LVG C S+FWPF LAVY LIP+*S
Sbjct: 572 YIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVYWLIPI*S 393
Query: 170 AEPLTNLACSGVNLGQPLF 114
AEPLT LA +GVNLG F
Sbjct: 392 AEPLTILASAGVNLGNLSF 336
Score = 106 bits (227), Expect(4) = 2e-032
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = -3 / -3
Query: 351 VHPFWDDVKPL*IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLIDPNVI 172
+HP WDDV+P+ IRLW +R A+ I NLPI *+A R LL+QFLALH AS VL+DPN++
Sbjct: 573 IHPRWDDVEPVRIRLWPNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLVDPNIV 394
Query: 171 R*ALDQLSLLRSKLG 127
R ALD S RS+LG
Sbjct: 393 RGALDHFSFSRSELG 349
Score = 84.9 bits (179), Expect(3) = 2e-027
Identities = 41/79 (51%), Positives = 51/79 (64%)
Frame = +3 / +3
Query: 114 KERLPQVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQ 293
+ + QV+S S* GQGL GL+WDQ +H * EGPE A A+A L S LAG +C + Q
Sbjct: 336 EREVAQVHSC*S*NGQGLRGLYWDQPVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQ 515
Query: 294 TDRTTGEFKVALHRPRRDV 350
D GEF++ALHRP DV
Sbjct: 516 ADWAKGEFELALHRPIGDV 572
Score = 82.6 bits (174), Expect(3) = 3e-024
Identities = 41/78 (52%), Positives = 48/78 (61%)
Frame = +2 / +2
Query: 116 REAAPSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTAN 295
+ PS L KL WSRA R LGS +T LA+*RARNC SR A Q IGR M A+
Sbjct: 338 KRGCPSSLLLKLKWSRAPRTILGSTSTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMAS 517
Query: 296 RSDHRRIQSGFTSSQKGC 349
R RRI++G TSS +GC
Sbjct: 518 RLGQRRIRTGSTSSHRGC 571
Score = 60.6 bits (126), Expect(4) = 2e-068
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +2 / +1
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NSTEDQAAAQRARDFHVGWF DPL
Sbjct: 226 NSTEDQAAAQRARDFHVGWFVDPL 297
Score = 47.3 bits (97), Expect(4) = 2e-068
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +1 / +2
Query: 343 GMYGCVNYLKHKYGNPTVFITENGMD 420
G CV+YL KYGNP + ITENGMD
Sbjct: 566 GCMXCVHYLSQKYGNPPIVITENGMD 643
Score = 46.9 bits (96), Expect(4) = 2e-068
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +1
Query: 75 INGHYPQIMQDIVKERLPQ 131
INGHYPQIMQD+VKERLP+
Sbjct: 298 INGHYPQIMQDLVKERLPK 354
Score = 42.3 bits (86), Expect(4) = 1e-045
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2 / -1
Query: 127 GSLSFTISCIICG*CPFI 74
G+LSFT SCIICG*CPFI
Sbjct: 350 GNLSFTRSCIICG*CPFI 297
Score = 41.4 bits (84), Expect(3) = 2e-027
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 1 KLNRRPSSGSKSKGFPCWLVC 63
+LN PSS SKS+G PCWLVC
Sbjct: 225 QLN*GPSSSSKSQGLPCWLVC 287
Score = 37.7 bits (76), Expect(4) = 1e-045
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -3 / -1
Query: 72 NGSANQPTWKSXXXXXXAWSSVE 4
+GS NQPTWKS AWSSVE
Sbjct: 296 SGSTNQPTWKSLAL*AAAWSSVE 228
Score = 36.8 bits (74), Expect(4) = 2e-032
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 67 ISKPTNMEIPCSLSRCLVFG*V 2
+ KPTNME+P SLS CLV *V
Sbjct: 291 VDKPTNMEVPGSLSCCLVLS*V 226
Score = 35.0 bits (70), Expect(3) = 3e-024
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +3 / +2
Query: 3 TQPKTKQRLKEQGISMLVGL 62
TQ +TKQ+LKE G SMLVGL
Sbjct: 227 TQLRTKQQLKEPGTSMLVGL 286
Score = 33.6 bits (67), Expect(3) = 2e-027
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 85 IIHR*CKIL*KRGCP 129
I HR*CK L*KRGCP
Sbjct: 308 ITHR*CKTL*KRGCP 352
Score = 31.8 bits (63), Expect(3) = 3e-024
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2 / +3
Query: 68 PLNKWTLSTDNARYCEREAA 127
P +K L TDNAR CERE A
Sbjct: 291 PADKRALPTDNARPCEREVA 350
Score = 31.8 bits (63), Expect(4) = 1e-045
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -1 / -3
Query: 419 SIPFSVMKTVGFPYLCFR*FTQPYIP 342
SIPFSVM GFPY R* T P
Sbjct: 642 SIPFSVMTIGGFPYFWLR*CTHXIHP 565
Score = 25.8 bits (50), Expect(4) = 2e-032
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -3 / -2
Query: 420 IHSVLGYENCWISILVLQIVH 358
IHSV Y++ + +L+ ++VH
Sbjct: 643 IHSVFSYDDRRVPVLLAEVVH 581
Score = 25.4 bits (49), Expect(4) = 2e-032
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -3 / -2
Query: 126 AASLSQYLALSVDNVHLFNG 67
A SLSQ LALSV N L G
Sbjct: 349 ATSLSQGLALSVGNARLSAG 290
>gb|AV913933.1|AV913933 AV913933 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m22 5', mRNA sequence
Length = 573
Score = 258 bits (557), Expect = 4e-068
Identities = 97/125 (77%), Positives = 111/125 (88%)
Frame = +1 / +3
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+FY+
Sbjct: 15 KANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRS 194
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKASAYWF 666
YL+EL+KAID GA+V GYFAWSLLDNFEW SGY+SKFGIVYVDF++P L+RHPKASAYWF
Sbjct: 195 YLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKASAYWF 374
Query: 667 RDMLQ 681
RD+L+
Sbjct: 375 RDLLR 389
Score = 195 bits (420), Expect = 3e-049
Identities = 93/121 (76%), Positives = 95/121 (78%)
Frame = -1 / -3
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 379 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 200
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 199 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 20
Query: 311 A 309
A
Sbjct: 19 A 17
Score = 153 bits (328), Expect = 1e-036
Identities = 68/124 (54%), Positives = 88/124 (70%)
Frame = -3 / -2
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 386 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 207
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 206 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 27
Query: 318 *IRL 307
IRL
Sbjct: 26 RIRL 15
Score = 120 bits (257), Expect = 9e-027
Identities = 62/124 (50%), Positives = 75/124 (60%)
Frame = +3 / +2
Query: 300 RTTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAIL 479
R GEF++ALHRP DV + L + +V + HN +RNGSA + PVPA H +G +L
Sbjct: 8 RGKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVL 187
Query: 480 QRLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGVSL 659
LP+ AEE H VSPRQL V VRL VQV +RLRRLQ Q + PQGV L
Sbjct: 188 PELPQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGVGL 367
Query: 660 LVQR 671
LVQR
Sbjct: 368 LVQR 379
Score = 71.2 bits (149), Expect(2) = 2e-022
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / -1
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 378 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 256
Score = 54.7 bits (113), Expect(2) = 2e-022
Identities = 28/65 (43%), Positives = 36/65 (55%)
Frame = -2 / -1
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 198 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 19
Query: 310 PVVRS 296
P R+
Sbjct: 18 PXPRA 4
>gb|AV921547.1|AV921547 AV921547 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m22 3', mRNA sequence
Length = 537
Score = 258 bits (557), Expect = 4e-068
Identities = 97/125 (77%), Positives = 111/125 (88%)
Frame = +1 / -3
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+FY+
Sbjct: 535 KANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRS 356
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKASAYWF 666
YL+EL+KAID GA+V GYFAWSLLDNFEW SGY+SKFGIVYVDF++P L+RHPKASAYWF
Sbjct: 355 YLSELKKAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKASAYWF 176
Query: 667 RDMLQ 681
RD+L+
Sbjct: 175 RDLLR 161
Score = 195 bits (420), Expect = 3e-049
Identities = 93/121 (76%), Positives = 95/121 (78%)
Frame = -1 / +3
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 171 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 350
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 351 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 530
Query: 311 A 309
A
Sbjct: 531 A 533
Score = 153 bits (328), Expect = 1e-036
Identities = 68/124 (54%), Positives = 88/124 (70%)
Frame = -3 / +2
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 164 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 343
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 344 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 523
Query: 318 *IRL 307
IRL
Sbjct: 524 RIRL 535
Score = 119 bits (255), Expect = 2e-026
Identities = 61/121 (50%), Positives = 74/121 (61%)
Frame = +3 / -2
Query: 309 GEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRL 488
GEF++ALHRP DV + L + +V + HN +RNGSA + PVPA H +G +L L
Sbjct: 533 GEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVLPEL 354
Query: 489 PR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGVSLLVQ 668
P+ AEE H VSPRQL V VRL VQV +RLRRLQ Q + PQGV LLVQ
Sbjct: 353 PQRAEEGHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGVGLLVQ 174
Query: 669 R 671
R
Sbjct: 173 R 171
Score = 71.2 bits (149), Expect(2) = 4e-022
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / +1
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 172 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 294
Score = 53.3 bits (110), Expect(2) = 4e-022
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = -2 / +1
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 352 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 531
Query: 310 P 308
P
Sbjct: 532 P 534
>gb|BE420971.1|BE420971 HWM004.D12 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.D12, mRNA sequence
Length = 1134
Score = 223 bits (482), Expect(2) = 3e-067
Identities = 85/113 (75%), Positives = 98/113 (86%)
Frame = +1 / +3
Query: 343 GMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDG 522
G CV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+FY+ YL+EL+KAID G
Sbjct: 117 GCLVCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKAIDGG 296
Query: 523 ADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKASAYWFRDMLQ 681
A+V GYFAWSLLDNFEW SGY+SKFGIVYVDF++P L+RHPKASAYWFRD+L+
Sbjct: 297 ANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKASAYWFRDLLR 455
Score = 167 bits (359), Expect(2) = 1e-048
Identities = 82/110 (74%), Positives = 84/110 (76%)
Frame = -1 / -3
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMAF SS
Sbjct: 445 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMAFFSSL 266
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIP 342
R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* TQ P
Sbjct: 265 R*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTQTKHP 116
Score = 126 bits (269), Expect(2) = 1e-034
Identities = 58/107 (54%), Positives = 75/107 (70%)
Frame = -3 / -2
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 452 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGLLQ 273
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVH 358
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH
Sbjct: 272 LAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVH 132
Score = 98.7 bits (209), Expect(2) = 7e-023
Identities = 51/103 (49%), Positives = 61/103 (59%)
Frame = +3 / +2
Query: 363 LSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRLPR*AEESHXXXXXXXXXX 542
L + +V + HN +RNGSA + PVPA H +G +L LP+ AEE H
Sbjct: 137 LPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVLPELPQRAEEGHRRWRQRSRLL 316
Query: 543 XXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGVSLLVQR 671
VSPRQL V VRL VQV +RLRRLQ Q + PQGV LLVQR
Sbjct: 317 RVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGVGLLVQR 445
Score = 71.2 bits (149), Expect(3) = 5e-021
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / -1
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 444 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 322
Score = 51.9 bits (107), Expect(2) = 3e-067
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +1 / +2
Query: 286 NGKPIGPQANSKWLYIVPEGMYG 354
NG PIGP+ANS WLYIVP GM+G
Sbjct: 59 NGMPIGPKANSNWLYIVPSGMFG 127
Score = 46.4 bits (95), Expect(2) = 1e-048
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -1 / -1
Query: 356 QPYIPSGTM*SHFEFACGPIGLPF 285
+P IP GTM*S FEFA GPIG+PF
Sbjct: 129 KPNIPDGTM*SQFEFAFGPIGMPF 58
Score = 40.5 bits (82), Expect(2) = 1e-034
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -3 / -3
Query: 354 TVHPFWDDVKPL*IRLWSDRFAV 286
T HP WDDV+P+ IRLW +R A+
Sbjct: 127 TKHPRWDDVEPVRIRLWPNRHAI 59
Score = 35.9 bits (72), Expect(3) = 5e-021
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = -2 / -2
Query: 355 NRTSLLGRCKATLNSPVVRSVC 290
N+TS +GRC+A+ NSP+ +S C
Sbjct: 128 NQTSPMGRCRASSNSPLAQSAC 63
Score = 31.3 bits (62), Expect(3) = 5e-021
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -2 / -1
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*K 395
GS R P C AGTG + ADPFR +L*+
Sbjct: 264 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*R 169
Score = 28.6 bits (56), Expect(2) = 7e-023
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 290 ANRSDHRRIQSGFTSSQKGCTV 355
A R RRI++G TSS +GC V
Sbjct: 63 ACRLGQRRIRTGSTSSHRGCLV 128
>gb|BM444610.1|BM444610 EBem09_SQ005_O09_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ005_O09 5', mRNA sequence
Length = 455
Score = 253 bits (548), Expect = 7e-067
Identities = 96/126 (76%), Positives = 109/126 (86%)
Frame = +1 / +3
Query: 304 PQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYK 483
P+ANS WLYIVP GMYGCV+YL KYGNP + ITENGMDQP LTR QYL DTTRV+FY+
Sbjct: 3 PKANSNWLYIVPSGMYGCVHYLSQKYGNPPIVITENGMDQPVGLTRDQYLRDTTRVRFYR 182
Query: 484 GYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPKASAYW 663
YL+EL AID GA+V GYFAWSLLDNFEW SGY+SKFGIVYVDF++P L+RHPKASAYW
Sbjct: 183 SYLSELNNAIDGGANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNSPNLDRHPKASAYW 362
Query: 664 FRDMLQ 681
FRD+L+
Sbjct: 363 FRDLLR 380
Score = 190 bits (410), Expect = 7e-048
Identities = 92/123 (74%), Positives = 94/123 (76%)
Frame = -1 / -2
Query: 671 SLNQ*ADALGCRSSLGVLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSA 492
SLNQ*ADALGCRS LG+LKST*T+PNLD *PD HSKLSRRD AK*P T AP SMA SS
Sbjct: 370 SLNQ*ADALGCRSRLGLLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAPPSMALFSSL 191
Query: 491 R*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEF 312
R* *N TLVVS RYW RV G*SIPFSVM GFPY R* T PYIP GTM*S FEF
Sbjct: 190 R*LR*NRTLVVSRRYWSRVSPTG*SIPFSVMTIGGFPYFWLR*CTHPYIPDGTM*SQFEF 11
Query: 311 ACG 303
A G
Sbjct: 10 AFG 2
Score = 158 bits (339), Expect = 5e-038
Identities = 69/125 (55%), Positives = 89/125 (71%)
Frame = -3 / -1
Query: 678 EHVSEPVG*RLGVSFELGRAEVDVDDSKLGRVT*LPLEVVEERPSEVASHVGAVIDGFPQ 499
+ VSEPVG RLGV ++G EVDVDD++LGRV PL+VVEERP EVA +VGA +DG Q
Sbjct: 377 QKVSEPVGRRLGVPIQVGAVEVDVDDAELGRVAGHPLKVVEERPREVAENVGATVDGIIQ 198
Query: 498 LSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTTVHPFWDDVKPL 319
L+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH +HP WDDV+P+
Sbjct: 197 LAEVAPVEPDPRRVPQVLVAREPHRLIHSVFSYDDRRVPVLLAEVVHAPIHPRWDDVEPV 18
Query: 318 *IRLW 304
IRLW
Sbjct: 17 RIRLW 3
Score = 116 bits (249), Expect = 1e-025
Identities = 61/123 (49%), Positives = 74/123 (60%)
Frame = +3 / +2
Query: 303 TTGEFKVALHRPRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQ 482
T GEF++ALHRP DV + L + +V + HN +RNGSA + PVPA H +G +L
Sbjct: 2 TKGEFELALHRPIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVLP 181
Query: 483 RLPR*AEESHXXXXXXXXXXXXVSPRQLRVAVRLHVQVWNRLRRLQHAQARTTPQGVSLL 662
LP+ AE H VSPRQL V VRL VQV +RLRRLQ Q + PQGV LL
Sbjct: 182 ELPQRAE*CHRRWRQRSRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQPQPGSAPQGVGLL 361
Query: 663 VQR 671
VQR
Sbjct: 362 VQR 370
Score = 71.2 bits (149), Expect(2) = 9e-023
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = -2 / -3
Query: 670 L*TSRLTPWGVVRAWAC*SRRRRFQTWTCNLTATRSCRGET 548
L*TSR TPWG W C*SRRRR +TWT + T+T+SCRGET
Sbjct: 369 L*TSRPTPWGADPGWGC*SRRRRCRTWTSSRTSTQSCRGET 247
Score = 55.6 bits (115), Expect(2) = 9e-023
Identities = 28/63 (44%), Positives = 36/63 (57%)
Frame = -2 / -3
Query: 490 GSLCRIAPLWCRAGTGHESSFLADPFRSRL*KLLDFHTCASDSSHNRTSLLGRCKATLNS 311
GS R P C AGTG + ADPFR +L*+ T S+ TS +GRC+A+ NS
Sbjct: 189 GSSGRTGPSSCPAGTGRA*APPADPFRFQL*RSAGSRTSG*GSARTHTSPMGRCRASSNS 10
Query: 310 PVV 302
P+V
Sbjct: 9 PLV 1
>gb|CA027495.1|CA027495 HZ59B20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59B20
5-PRIME, mRNA sequence
Length = 388
Score = 253 bits (547), Expect = 9e-067
Identities = 100/125 (80%), Positives = 109/125 (87%)
Frame = +1 / +2
Query: 157 VKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIV 336
VKGSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGKPIGP+ANS WLYIV
Sbjct: 11 VKGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGKPIGPKANSNWLYIV 190
Query: 337 PEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAID 516
P GMYGCV+YL KYGNP + ITENGMDQPG LTR QYL DTTRV+FY+ YL+EL+KAID
Sbjct: 191 PSGMYGCVHYLSQKYGNPPIVITENGMDQPGGLTRDQYLRDTTRVRFYRSYLSELKKAID 370
Query: 517 DGADV 531
GA+V
Sbjct: 371 GGANV 385
Score = 192 bits (413), Expect = 3e-048
Identities = 92/125 (73%), Positives = 94/125 (75%)
Frame = -1 / -2
Query: 530 TSAPSSMAFLSSAR*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQP 351
T AP SMAF SS R* *N TLVVS RYW RV PG*SIPFSVM GFPY R* T P
Sbjct: 384 TLAPPSMAFFSSLR*LR*NRTLVVSRRYWSRVSPPG*SIPFSVMTIGGFPYFWLR*CTHP 205
Query: 350 YIPSGTM*SHFEFACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*S 171
YIP GTM*S FEFA GPIGLPF SK TCQSAE*LVG C S+FWPF LAVY LIP+*S
Sbjct: 204 YIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVYWLIPI*S 25
Query: 170 AEPLT 156
AEPLT
Sbjct: 24 AEPLT 10
Score = 149 bits (321), Expect = 1e-035
Identities = 66/125 (52%), Positives = 87/125 (69%)
Frame = -3 / -1
Query: 531 HVGAVIDGFPQLSEVAFVELHPCGVVQVLATSQVSWLIHSVLGYENCWISILVLQIVHTT 352
+VGA +DG QL+EVA VE P V QVL + LIHSV Y++ + +L+ ++VH
Sbjct: 385 NVGATVDGLLQLAEVAPVEPDPRRVPQVLVAREPPRLIHSVFSYDDRRVPVLLAEVVHAP 206
Query: 351 VHPFWDDVKPL*IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLIDPNVI 172
+HP WDDV+P+ IRLW +R A+ I NLPI *+A R LL+QFLALH AS VL+DPN++
Sbjct: 205 IHPRWDDVEPVRIRLWPNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLVDPNIV 26
Query: 171 R*ALD 157
R ALD
Sbjct: 25 RGALD 11
Score = 122 bits (261), Expect = 3e-027
Identities = 58/119 (48%), Positives = 74/119 (62%)
Frame = +3 / +1
Query: 156 GQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQTDRTTGEFKVALHR 335
GQGL GL+WDQ +H * EGPE A A+A L S LAG +C + Q D GEF++ALHR
Sbjct: 10 GQGLRGLYWDQPVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQADWAKGEFELALHR 189
Query: 336 PRRDVRLCELSEAQVWKSNSFHNRERNGSARKLDSWPVPARHHKGAILQRLPR*AEESH 512
P DV + L + +V + HN +RNGSA + PVPA H +G +L LP+ AEE H
Sbjct: 190 PIGDVWVRALPQPEVREPADRHN*KRNGSAGGAHARPVPAGHDEGPVLPELPQRAEEGH 366
Score = 110 bits (235), Expect = 1e-023
Identities = 61/125 (48%), Positives = 75/125 (60%)
Frame = +2 / +3
Query: 158 SRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTANRSDHRRIQSGFTSS 337
SRA R LGS +T LA+*RARNC SR A Q IGR M A+R RRI++G TSS
Sbjct: 12 SRAPRTILGSTSTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMASRLGQRRIRTGSTSS 191
Query: 338 QKGCTVV*TI*STSMEIQQFS*PRTEWISQET*LVASTCTTPQGCNSTKATSLS*GKPSM 517
+GC T + S ++ S* +TEWIS+ STC T +G ST ATS S* +PS
Sbjct: 192 HRGCMGACTTSARSTGTRRSS*LKTEWISRGGSRATSTCGTRRGSGSTGATSAS*RRPST 371
Query: 518 TAPTW 532
APT+
Sbjct: 372 VAPTF 386
>gb|BJ463364.1|BJ463364 BJ463364 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27d04 5', mRNA sequence
Length = 649
Score = 171 bits (368), Expect(3) = 1e-062
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = +1 / +3
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K PKFTP +AK+V GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGK
Sbjct: 396 KERLPKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGK 575
Query: 295 PIGPQANSKWLYIVPEGMYGCVNY 366
PIGP+ANS WLYIVP GMYGCV+Y
Sbjct: 576 PIGPKANSNWLYIVPSGMYGCVHY 647
Score = 136 bits (292), Expect(3) = 3e-045
Identities = 63/85 (74%), Positives = 67/85 (78%)
Frame = -1 / -1
Query: 368 R*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY* 189
R* T PYIP GTM*S FEFA GPIGLPF SK TCQSAE*LVG C S+FWPF LAVY*
Sbjct: 649 R*CTHPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY* 470
Query: 188 LIPM*SAEPLTNLACSGVNLGQPLF 114
LIP+*SAEP+T LA +GVNLG F
Sbjct: 469 LIPI*SAEPMTILASAGVNLGNLSF 395
Score = 112 bits (240), Expect(3) = 6e-037
Identities = 48/80 (60%), Positives = 59/80 (73%)
Frame = -3 / -3
Query: 366 IVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLI 187
+VH +HP WDDV+P+ IRLWS+R A+ I NLPI *+A R LL+QFLALH AS VLI
Sbjct: 647 VVHAPIHPRWDDVEPVRIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLI 468
Query: 186 DPNVIR*ALDQLSLLRSKLG 127
DPN++R A D S RS+LG
Sbjct: 467 DPNIVRGAHDHFSFSRSELG 408
Score = 87.2 bits (184), Expect(3) = 6e-029
Identities = 42/79 (53%), Positives = 52/79 (65%)
Frame = +3 / +2
Query: 114 KERLPQVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQ 293
+ + QV+S S* G GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q
Sbjct: 395 EREVAQVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQ 574
Query: 294 TDRTTGEFKVALHRPRRDV 350
D T GEF++ALHRP DV
Sbjct: 575 ADWTKGEFELALHRPIGDV 631
Score = 84.5 bits (178), Expect(3) = 1e-024
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = +2 / +1
Query: 116 REAAPSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTAN 295
+ PS L KL WS A R LGSI+T LA+*RARNC SR A Q IGR M A+
Sbjct: 397 KRGCPSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMAS 576
Query: 296 RSDHRRIQSGFTSSQKGC 349
R D RRI++G TSS +GC
Sbjct: 577 RLDQRRIRTGSTSSHRGC 630
Score = 60.6 bits (126), Expect(3) = 1e-062
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +2 / +3
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NSTEDQAAAQRARDFHVGWF DPL
Sbjct: 285 NSTEDQAAAQRARDFHVGWFVDPL 356
Score = 46.9 bits (96), Expect(3) = 1e-062
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +3
Query: 75 INGHYPQIMQDIVKERLPQ 131
INGHYPQIMQD+VKERLP+
Sbjct: 357 INGHYPQIMQDLVKERLPK 413
Score = 46.0 bits (94), Expect(3) = 3e-045
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1 / -3
Query: 131 LGQPLFHNILHYLWIMSIY 75
LGQPLFH +LHYLW+M +Y
Sbjct: 413 LGQPLFHKVLHYLWVMPVY 357
Score = 44.6 bits (91), Expect(3) = 6e-029
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / +2
Query: 1 KLNRRPSSGSKSKGFPCWLVC 63
+LN RPSS SKS+G PCWLVC
Sbjct: 284 QLN*RPSSSSKSQGLPCWLVC 346
Score = 42.3 bits (86), Expect(3) = 6e-037
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2 / -1
Query: 127 GSLSFTISCIICG*CPFI 74
G+LSFT SCIICG*CPFI
Sbjct: 409 GNLSFTRSCIICG*CPFI 356
Score = 37.7 bits (76), Expect(3) = 3e-045
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -3 / -1
Query: 72 NGSANQPTWKSXXXXXXAWSSVE 4
+GS NQPTWKS AWSSVE
Sbjct: 355 SGSTNQPTWKSLAL*AAAWSSVE 287
Score = 37.3 bits (75), Expect(3) = 6e-037
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / -3
Query: 67 ISKPTNMEIPCSLSRCLVFG*V 2
+ KP NME+P SLS CLVF *V
Sbjct: 350 VDKPANMEVPGSLSCCLVFS*V 285
Score = 34.5 bits (69), Expect(3) = 1e-024
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 3 TQPKTKQRLKEQGISMLVGL 62
TQ KTKQ+LKE G SML GL
Sbjct: 286 TQLKTKQQLKEPGTSMLAGL 345
Score = 33.6 bits (67), Expect(3) = 6e-029
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 85 IIHR*CKIL*KRGCP 129
I HR*CK L*KRGCP
Sbjct: 367 ITHR*CKTL*KRGCP 411
Score = 31.8 bits (63), Expect(3) = 1e-024
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2 / +2
Query: 68 PLNKWTLSTDNARYCEREAA 127
P +K L TDNAR CERE A
Sbjct: 350 PADKRALPTDNARPCEREVA 409
>gb|BJ464115.1|BJ464115 BJ464115 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31o15 5', mRNA sequence
Length = 523
Score = 171 bits (368), Expect(3) = 1e-062
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = +1 / +1
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K PKFTP +AK+V GSADYIGINQYTAS +KGQKLLQQ PTSYSADWQV Y ERNGK
Sbjct: 271 KERLPKFTPAEAKMVMGSADYIGINQYTASLMKGQKLLQQTPTSYSADWQVTYAFERNGK 450
Query: 295 PIGPQANSKWLYIVPEGMYGCVNY 366
PIGP+ANS WLYIVP GMYGCV+Y
Sbjct: 451 PIGPKANSNWLYIVPSGMYGCVHY 522
Score = 134 bits (288), Expect(3) = 1e-044
Identities = 61/82 (74%), Positives = 65/82 (79%)
Frame = -1 / -3
Query: 359 TQPYIPSGTM*SHFEFACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIP 180
T PYIP GTM*S FEFA GPIGLPF SK TCQSAE*LVG C S+FWPF LAVY*LIP
Sbjct: 515 THPYIPDGTM*SQFEFAFGPIGLPFLSKA*VTCQSAE*LVGVCCSNFWPFMRLAVY*LIP 336
Query: 179 M*SAEPLTNLACSGVNLGQPLF 114
+*SAEP+T LA +GVNLG F
Sbjct: 335 I*SAEPMTILASAGVNLGNLSF 270
Score = 112 bits (240), Expect(3) = 6e-037
Identities = 48/80 (60%), Positives = 59/80 (73%)
Frame = -3 / -2
Query: 366 IVHTTVHPFWDDVKPL*IRLWSDRFAVPF*NILNLPIS*VASRLLLEQFLALHVASGVLI 187
+VH +HP WDDV+P+ IRLWS+R A+ I NLPI *+A R LL+QFLALH AS VLI
Sbjct: 522 VVHAPIHPRWDDVEPVRIRLWSNRLAISLKGIGNLPIG*IAGRRLLQQFLALHEASCVLI 343
Query: 186 DPNVIR*ALDQLSLLRSKLG 127
DPN++R A D S RS+LG
Sbjct: 342 DPNIVRGAHDHFSFSRSELG 283
Score = 87.2 bits (184), Expect(3) = 6e-029
Identities = 42/79 (53%), Positives = 52/79 (65%)
Frame = +3 / +3
Query: 114 KERLPQVYSGAS*VGQGLSGLHWDQSIHR*LREGPETAPAEAY*LLS*LAGSICFRTERQ 293
+ + QV+S S* G GL GL+WDQS+H * EGPE A A+A L S LAG +C + Q
Sbjct: 270 EREVAQVHSC*S*NGHGLRGLYWDQSVHS*PHEGPEIAAADADQLFSRLAGYLCL*EKWQ 449
Query: 294 TDRTTGEFKVALHRPRRDV 350
D T GEF++ALHRP DV
Sbjct: 450 ADWTKGEFELALHRPIGDV 506
Score = 84.5 bits (178), Expect(3) = 1e-024
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = +2 / +2
Query: 116 REAAPSLLRSKLSWSRAQRITLGSINTPLAT*RARNCSSRSLLATQLIGRFNMF*NGTAN 295
+ PS L KL WS A R LGSI+T LA+*RARNC SR A Q IGR M A+
Sbjct: 272 KRGCPSSLLLKLKWSWAPRTILGSISTQLAS*RARNCCSRRRPAIQPIGRLPMPLREMAS 451
Query: 296 RSDHRRIQSGFTSSQKGC 349
R D RRI++G TSS +GC
Sbjct: 452 RLDQRRIRTGSTSSHRGC 505
Score = 60.6 bits (126), Expect(3) = 1e-062
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +2 / +1
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NSTEDQAAAQRARDFHVGWF DPL
Sbjct: 160 NSTEDQAAAQRARDFHVGWFVDPL 231
Score = 46.9 bits (96), Expect(3) = 1e-062
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +3 / +1
Query: 75 INGHYPQIMQDIVKERLPQ 131
INGHYPQIMQD+VKERLP+
Sbjct: 232 INGHYPQIMQDLVKERLPK 288
Score = 46.0 bits (94), Expect(3) = 1e-044
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1 / -2
Query: 131 LGQPLFHNILHYLWIMSIY 75
LGQPLFH +LHYLW+M +Y
Sbjct: 288 LGQPLFHKVLHYLWVMPVY 232
Score = 44.6 bits (91), Expect(3) = 6e-029
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / +3
Query: 1 KLNRRPSSGSKSKGFPCWLVC 63
+LN RPSS SKS+G PCWLVC
Sbjct: 159 QLN*RPSSSSKSQGLPCWLVC 221
Score = 42.3 bits (86), Expect(3) = 6e-037
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -2 / -3
Query: 127 GSLSFTISCIICG*CPFI 74
G+LSFT SCIICG*CPFI
Sbjct: 284 GNLSFTRSCIICG*CPFI 231
Score = 37.7 bits (76), Expect(3) = 1e-044
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -3 / -3
Query: 72 NGSANQPTWKSXXXXXXAWSSVE 4
+GS NQPTWKS AWSSVE
Sbjct: 230 SGSTNQPTWKSLAL*AAAWSSVE 162
Score = 37.3 bits (75), Expect(3) = 6e-037
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -2 / -2
Query: 67 ISKPTNMEIPCSLSRCLVFG*V 2
+ KP NME+P SLS CLVF *V
Sbjct: 225 VDKPANMEVPGSLSCCLVFS*V 160
Score = 34.5 bits (69), Expect(3) = 1e-024
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +2
Query: 3 TQPKTKQRLKEQGISMLVGL 62
TQ KTKQ+LKE G SML GL
Sbjct: 161 TQLKTKQQLKEPGTSMLAGL 220
Score = 33.6 bits (67), Expect(3) = 6e-029
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 85 IIHR*CKIL*KRGCP 129
I HR*CK L*KRGCP
Sbjct: 242 ITHR*CKTL*KRGCP 286
Score = 31.8 bits (63), Expect(3) = 1e-024
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2 / +3
Query: 68 PLNKWTLSTDNARYCEREAA 127
P +K L TDNAR CERE A
Sbjct: 225 PADKRALPTDNARPCEREVA 284
>gb|BJ462547.1|BJ462547 BJ462547 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29b06 5', mRNA sequence
Length = 657
Score = 189 bits (407), Expect(4) = 1e-062
Identities = 71/137 (51%), Positives = 97/137 (70%)
Frame = +1 / +1
Query: 115 KRGCPKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGK 294
K P+F+ +++ ++KGS DY+GINQYT+ Y+K P SY DW V+++ ERNG
Sbjct: 211 KERLPRFSADESTMIKGSIDYVGINQYTSFYMKDTGTWNLTPVSYQDDWHVEFIYERNGV 390
Query: 295 PIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQ 474
PIG ANS WLYIVP G+ V Y+K +YGNPT+ + ENGMDQPGN++ + DT RV+
Sbjct: 391 PIGAHANSYWLYIVPWGINKAVTYVKERYGNPTMILAENGMDQPGNVSITDGVQDTVRVR 570
Query: 475 FYKGYLAELRKAIDDGA 525
+Y+ Y+ EL+KAIDDGA
Sbjct: 571 YYRDYITELKKAIDDGA 621
Score = 114 bits (244), Expect(3) = 9e-027
Identities = 68/133 (51%), Positives = 75/133 (56%)
Frame = -1 / -2
Query: 524 APSSMAFLSSAR*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYI 345
APSS+AFLSS * L* TL VSC + FPG SIPFS VGFPYL * T I
Sbjct: 620 APSSIAFLSSVM*SL*YRTLTVSCTPSVMLTFPGWSIPFSARIIVGFPYLSLT*VTALLI 441
Query: 344 PSGTM*SHFEFACGPIGLPFRSKTY*TCQSAE*LVGFCWSSFWPFT*LAVY*LIPM*SAE 165
P GTM*S EFA PIG P RS TCQS+ *L G + F * VY LIP *S +
Sbjct: 440 PHGTM*SQ*EFAWAPIGTPLRS*INSTCQSSW*LTGVRFQVPVSFM*KEVYWLIPT*SMD 261
Query: 164 PLTNLACSGVNLG 126
P + S + G
Sbjct: 260 PFIIVDSSALKRG 222
Score = 51.5 bits (106), Expect(4) = 1e-062
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2 / +1
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
N+ DQAAAQRARDFH+GWF DP+
Sbjct: 100 NNNADQAAAQRARDFHLGWFLDPI 171
Score = 30.9 bits (61), Expect(4) = 1e-062
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3 / +1
Query: 75 INGHYPQIMQDIVKERLPQ 131
I+G YP M +IVKERLP+
Sbjct: 172 IHGRYPFTMLEIVKERLPR 228
Score = 25.4 bits (49), Expect(4) = 1e-062
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 529 VAGYFAWSLL 558
V GYFAWSLL
Sbjct: 626 VIGYFAWSLL 655
Score = 24.9 bits (48), Expect(3) = 9e-027
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -1 / -1
Query: 140 GVNLGQPLFHNILHYLWIMSIY 75
G QPL N+ H W+ ++Y
Sbjct: 237 GTEAWQPLLDNLEHREWVATMY 172
Score = 21.7 bits (41), Expect(3) = 9e-027
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3 / -2
Query: 69 GSANQPTWKS 40
GS N P WKS
Sbjct: 167 GSRNHPRWKS 138
>gb|CK124362.1|CK124362 BES1824108i03 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010I038 5-PRIME, mRNA sequence
Length = 655
Score = 236 bits (510), Expect(2) = 2e-062
Identities = 90/146 (61%), Positives = 113/146 (77%)
Frame = +1 / +1
Query: 193 YTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLK 372
YT+ Y+K Q P SY DW V +V ERNG PIGP+ANS WLYIVP GM V Y+K
Sbjct: 1 YTSYYMKDPGAWNQTPVSYQDDWHVGFVYERNGVPIGPRANSDWLYIVPWGMNKAVTYVK 180
Query: 373 HKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWS 552
+YGNPT+ ++ENGMDQPGN++ +HDT R+++Y+ Y+ EL+KAID+GA VAGYFAWS
Sbjct: 181 ERYGNPTMILSENGMDQPGNVSIADGVHDTVRIRYYRDYITELKKAIDNGARVAGYFAWS 360
Query: 553 LLDNFEWQSGYTSKFGIVYVDFSTPK 630
LLDNFEW+ GYT++FGIVYVDF+T K
Sbjct: 361 LLDNFEWRLGYTARFGIVYVDFNTLK 438
Score = 154 bits (330), Expect = 8e-037
Identities = 81/129 (62%), Positives = 86/129 (66%)
Frame = -1 / -3
Query: 623 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYW 444
VLKST*T+P V*P HSKLS RDQAK PAT AP S+AFLSS * L* L VSC
Sbjct: 431 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAPLSIAFLSSVM*SL*YRILTVSCTPS 252
Query: 443 PRVKFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPFRSKTY*T 264
+ FPG SIPFS VGFPYL * T +IP GTM*S EFA GPIG PFRS T T
Sbjct: 251 AMLTFPGWSIPFSESIIVGFPYLSLT*VTALFIPHGTM*SQSEFARGPIGTPFRS*TNPT 72
Query: 263 CQSAE*LVG 237
CQS+ *L G
Sbjct: 71 CQSSW*LTG 45
Score = 23.5 bits (45), Expect(2) = 2e-062
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3 / +1
Query: 642 PQGVSLLVQRHA 677
P+G+SL+VQ HA
Sbjct: 445 PKGLSLVVQEHA 480
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 389,813,651
Number of Sequences: 312970
Number of extensions: 5921517
Number of successful extensions: 39637
Number of sequences better than 1.0e-020: 196
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 9725963709
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)