TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3012883.2.1
(1189 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA025036.1|CA025036 HZ51A16r HZ Hordeum vulgare subsp. v... 394 e-109
gb|BU989594.1|BU989594 HF22C17r HF Hordeum vulgare subsp. v... 385 e-106
gb|BU986297.1|BU986297 HF11F11r HF Hordeum vulgare subsp. v... 375 e-103
gb|BG418473.2|BG418473 HVSMEk0022N01f Hordeum vulgare testa... 363 e-100
gb|BG343506.2|BG343506 HVSMEg0005P06f Hordeum vulgare pre-a... 330 6e-097
gb|BM372329.2|BM372329 EBro03_SQ004_K14_R root, 3 week, wat... 353 1e-096
gb|BI958288.1|BI958288 HVSMEn0014E05f Hordeum vulgare rachi... 349 2e-096
gb|BQ472155.1|BQ472155 HV04J02r HV Hordeum vulgare subsp. v... 351 6e-096
gb|BF267575.2|BF267575 HV_CEa0018F03f Hordeum vulgare seedl... 325 1e-095
gb|AV917182.1|AV917182 AV917182 K. Sato unpublished cDNA li... 314 5e-090
gb|BF259611.2|BF259611 HVSMEf0019M16f Hordeum vulgare seedl... 316 1e-085
gb|CA028228.1|CA028228 HZ61G01r HZ Hordeum vulgare subsp. v... 314 4e-085
gb|BU981013.1|BU981013 HA22G03r HA Hordeum vulgare subsp. v... 256 7e-078
gb|BQ460377.1|BQ460377 HA09O01r HA Hordeum vulgare subsp. v... 275 2e-073
gb|BI950683.1|BI950683 HVSMEl0022G13f Hordeum vulgare spike... 247 6e-069
gb|CD662917.1|CD662917 UCRHV18_03ce02_b1 Drought-stressed D... 251 5e-066
gb|AY246906.1| Hordeum vulgare subsp. vulgare syntaxin (Ror... 133 4e-060
gb|AY246907.1| Hordeum vulgare subsp. vulgare syntaxin (Ror... 133 4e-060
gb|AY247217.1| Hordeum vulgare subsp. vulgare syntaxin-like... 131 5e-059
gb|AV919917.1|AV919917 AV919917 K. Sato unpublished cDNA li... 227 7e-059
gb|BG416184.2|BG416184 HVSMEk0010D08f Hordeum vulgare testa... 203 2e-051
gb|BQ759323.1|BQ759323 EBpi01_SQ004_N01_R pistil, 1 DPA, no... 173 4e-044
gb|BI952271.1|BI952271 HVSMEm0005J13f Hordeum vulgare green... 141 6e-044
gb|AY247215.1| Hordeum vulgare subsp. vulgare syntaxin-like... 172 4e-042
gb|CB880180.1|CB880180 HM05L22w HM Hordeum vulgare subsp. v... 119 3e-032
gb|BU978750.1|BU978750 HA14C16r HA Hordeum vulgare subsp. v... 124 7e-029
gb|BU978987.1|BU978987 HA14N10r HA Hordeum vulgare subsp. v... 124 7e-029
gb|BQ657062.1|BQ657062 HA09O01u HA Hordeum vulgare subsp. v... 122 7e-029
gb|BQ761625.1|BQ761625 EBem10_SQ001_G12_R embryo, 2 Day ger... 126 2e-028
gb|BG368961.1|BG368961 HVSMEi0021H10f Hordeum vulgare 20 DA... 114 5e-026
gb|CB881364.1|CB881364 HM09J09w HM Hordeum vulgare subsp. v... 118 7e-026
gb|BG366137.2|BG366137 HVSMEi0005O19f Hordeum vulgare 20 DA... 85 3e-023
gb|AY247216.1| Hordeum vulgare subsp. vulgare syntaxin-like... 109 4e-023
gb|BQ458502.1|BQ458502 HA05A10r HA Hordeum vulgare subsp. v... 105 7e-022
>gb|CA025036.1|CA025036 HZ51A16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51A16
5-PRIME, mRNA sequence
Length = 632
Score = 394 bits (855), Expect = e-109
Identities = 170/203 (83%), Positives = 180/203 (88%)
Frame = +1 / +1
Query: 94 AAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNK 273
AAMNNLLTDSFELPRRDSSRD D+EMGMHQ DASDNLK FLKKVD IES+I KL+NLL K
Sbjct: 22 AAMNNLLTDSFELPRRDSSRDGDVEMGMHQPDASDNLKGFLKKVDGIESLIVKLTNLLTK 201
Query: 274 LXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGK 453
L +ANEES VTKAS+MKAIKQRMEKDIDEVGKIA AKTKVDELE+DNLSNRQKPGCGK
Sbjct: 202 LQSANEESKAVTKASAMKAIKQRMEKDIDEVGKIARMAKTKVDELEKDNLSNRQKPGCGK 381
Query: 454 GSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDD 633
GSAVDRSREQTTGAVKKKLKERMDDFQ LRE+IRQ FTVTGNRPDEETIDD
Sbjct: 382 GSAVDRSREQTTGAVKKKLKERMDDFQVLRESIRQEYREVVERRVFTVTGNRPDEETIDD 561
Query: 634 LIETGKSEQIFKDAIQHQGRGQI 702
LIETG+SEQIFKDA+Q QGRGQ+
Sbjct: 562 LIETGRSEQIFKDAVQQQGRGQV 630
Score = 308 bits (668), Expect = 3e-083
Identities = 144/200 (72%), Positives = 146/200 (73%)
Frame = -3 / -1
Query: 698 WPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSI 519
WPLP C ASL ICSL P SGRLPVTV TLLSTTSRYSC I SL *KSSI
Sbjct: 626 WPLPCC*TASLKICSLLPVSIKSSIVSSSGRLPVTVNTLLSTTSRYSCRIDSLNT*KSSI 447
Query: 518 RSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFPTSSISFSIR 339
RSFNFF TAPVVCSLDRSTA+PFPHPGFCL D+LS SSSST VFA AIFPTSSISFSIR
Sbjct: 446 RSFNFFLTAPVVCSLDRSTADPFPHPGFCLLDKLSFSSSSTLVFAIRAIFPTSSISFSIR 267
Query: 338 CLIAFMELAFVTXXDSSFAVWSLFNRFDSFAIILSIASTFFKKSFKLXXXXXXXXXXXXX 159
CLIAFM LAFVT DSSFA WSL RF S I LSI STFFKK FKL
Sbjct: 266 CLIAFMALAFVTAFDSSFADWSLVKRFVSLTIRLSIPSTFFKKPFKLSEASG*CIPISTS 87
Query: 158 XSLEESRRGSSKESVRRLFM 99
SLEESRRGSS ESV RLFM
Sbjct: 86 PSLEESRRGSSNESVSRLFM 27
Score = 287 bits (621), Expect = 8e-077
Identities = 131/201 (65%), Positives = 148/201 (73%)
Frame = -2 / -3
Query: 702 YLASSLMLDSIFEYLLTFSGLYQVINCLFIRTITSYSKNPSFDNLSILLPDCFSQGLKII 523
YLAS L+L+SIFE LLT L +IN LFIR ITSYSK PSF+N +LLPD FSQ LKI+
Sbjct: 630 YLASPLLLNSIFENLLTPPCLD*IINSLFIRAITSYSKYPSFNNFPVLLPD*FSQYLKIV 451
Query: 522 HPFLQFLFHCXXXXXXXSVHGRTLSTSRFLPIR*VISFQFINFCLCLRSNFPHFINIFLH 343
HPFLQFLF C S++ R L SRFLP+R*VI FQFINF C SNFPHFINIFLH
Sbjct: 450 HPFLQFLFDCSSSLFS*SIYCRPLPASRFLPVR*VIFFQFINFGFCHTSNFPHFINIFLH 271
Query: 342 PLLNCFHGTCFCNXXGFLICSXELIQ*I*QLCNYTLNCIDLLQEIFQVV*SISLMHSHFN 163
LLNCFHGTCFCN FL+C EL Q I QL LN I+LLQE F ++ SI LMHSHFN
Sbjct: 270 SLLNCFHGTCFCNCF*FLVCRLELSQEIRQLNY*ALNSINLLQEAF*IIRSIRLMHSHFN 91
Query: 162 ICVS*GVPPRELKGIREEVVH 100
+ +S*G+PPR+LK I E VVH
Sbjct: 90 VPIS*GIPPRKLK*IGE*VVH 28
Score = 179 bits (385), Expect(2) = 4e-057
Identities = 84/123 (68%), Positives = 95/123 (77%)
Frame = +2 / +2
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*R 514
SS WRKILMKWGKLL+ Q+ KLMNWK+ITY G+NLD R L DQE++LLEQ KRN*R
Sbjct: 263 SSEWRKILMKWGKLLVWQKPKLMNWKKITYLTGRNLDAGRGLQ*IDQENRLLEQSKRN*R 442
Query: 515 NGWMIFRP*EKQSGKSIERLSKEGFLL*LVIVLMKRQLMT**RPEKVSKYSKMLSNIREE 694
NGW IFR *E QSG+S +L KEG+LL*LVI LMKR LM * R VSK+SKML + R E
Sbjct: 443 NGWTIFRY*ENQSGRSTGKLLKEGYLL*LVIALMKRLLMI*SRQGGVSKFSKMLFSSRGE 622
Query: 695 ARY 703
ARY
Sbjct: 623 ARY 631
Score = 135 bits (289), Expect(3) = 1e-055
Identities = 66/95 (69%), Positives = 72/95 (75%)
Frame = +3 / +3
Query: 93 RRHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE* 272
RRHEQP H F+*A SAG LKR *NGNAS *CF +R LEEG N*E N A +S++*
Sbjct: 21 RRHEQPTHRFI*ASSAGFLKRWGR*NGNASA*CF**FKRLLEEG*WN*EPNS*ADESLD* 200
Query: 273 APXCK*GIXXSYKSKFHESN*AADGERY**SGENC 377
AP CK GI SYKSK HESN*AA+GERY**SGENC
Sbjct: 201 APVCKRGIKSSYKSKCHESN*AANGERY**SGENC 305
Score = 114 bits (244), Expect(2) = 3e-041
Identities = 58/85 (68%), Positives = 60/85 (70%)
Frame = -1 / -2
Query: 607 DYQLQ*KPFFRQPLDTLA*LLLSRSENHPSVPSISFSLLQ*FALLIGPRQNPFHIQVFAY 428
DYQLQ* PFF+Q T A L+LS EN PSVPSISF LLQ* LLI Q P IQV A
Sbjct: 535 DYQLQ*IPFFQQLPGTPAGLILSIPENRPSVPSISF*LLQ*SVLLIDLLQTPSRIQVSAC 356
Query: 427 SIGYLFPVHQLLSLPEEQFSPLHQY 353
I YLFPVHQL LP EQFSPLHQY
Sbjct: 355 *ISYLFPVHQLWFLPYEQFSPLHQY 281
Score = 95.5 bits (202), Expect(3) = 1e-055
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3 / +3
Query: 432 AKTWMWKGFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQARVSRGCRKKGFYCNW*SS 611
A+TWM +G C IKR +YWSS+KEIEGTDG FS +ER N A V C KKG YCNW*S
Sbjct: 360 AETWMREGVCSRSIKRTDYWSSQKEIEGTDGRFSGIERINPAGVPGSC*KKGIYCNW*SP 539
Query: 612 ** 617
**
Sbjct: 540 ** 545
Score = 74.8 bits (157), Expect(2) = 3e-041
Identities = 36/59 (61%), Positives = 41/59 (69%)
Frame = -1 / -2
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGAQRN 119
IP LQ GA S D +A L SQ H+PSSR+L + KHQ DAFPFQ LLR+PAE AQ N
Sbjct: 223 IPRLQTGA*SRDSSA*LLGSQFHQPSSRSLLNYQKHQADAFPFQRPHLLRNPAEEAQMN 47
Score = 63.4 bits (132), Expect(2) = 4e-057
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +2 / +2
Query: 137 GGTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
GG PQE LKWECI LML *K S*RR M+LR * S +I *+SS LQ RN
Sbjct: 65 GGIPQEMGTLKWECISLMLLII*KAS*RRLMELRA**LS*RIS*LSSSLQTRN 223
Score = 25.4 bits (49), Expect(3) = 1e-055
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3 / +3
Query: 648 KK*ANIQRCYPTSGKRP 698
++*AN QRC +G+RP
Sbjct: 576 EE*ANFQRCCSAAGERP 626
>gb|BU989594.1|BU989594 HF22C17r HF Hordeum vulgare subsp. vulgare cDNA clone HF22C17
5-PRIME, mRNA sequence
Length = 626
Score = 385 bits (836), Expect = e-106
Identities = 167/199 (83%), Positives = 176/199 (88%)
Frame = +1 / +1
Query: 94 AAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNK 273
AAMNNLLTDSFELPRRDSSRD D+EMGMHQ DASDNLK FLKKVD IES+I KL+NLL K
Sbjct: 28 AAMNNLLTDSFELPRRDSSRDGDVEMGMHQPDASDNLKGFLKKVDGIESLIVKLTNLLTK 207
Query: 274 LXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGK 453
L +ANEES VTKAS+MKAIKQRMEKDIDEVGKIA AKTKVDELE+DNLSNRQKPGCGK
Sbjct: 208 LQSANEESKAVTKASAMKAIKQRMEKDIDEVGKIARMAKTKVDELEKDNLSNRQKPGCGK 387
Query: 454 GSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDD 633
GSAVDRSREQTTGAVKKKLKERMDDFQ LRE+IRQ FTVTGNRPDEETIDD
Sbjct: 388 GSAVDRSREQTTGAVKKKLKERMDDFQVLRESIRQEYREVVERRVFTVTGNRPDEETIDD 567
Query: 634 LIETGKSEQIFKDAIQHQG 690
LIETG+SEQIFKDA+Q QG
Sbjct: 568 LIETGRSEQIFKDAVQQQG 624
Score = 300 bits (650), Expect = 8e-081
Identities = 142/198 (71%), Positives = 144/198 (72%)
Frame = -3 / -1
Query: 692 LP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRS 513
LP C ASL ICSL P SGRLPVTV TLLSTTSRYSC I SL *KSSIRS
Sbjct: 626 LPCC*TASLKICSLLPVSIKSSIVSSSGRLPVTVNTLLSTTSRYSCRIDSLNT*KSSIRS 447
Query: 512 FNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCL 333
FNFF TAPVVCSLDRSTA+PFPHPGFCL D+LS SSSST VFA AIFPTSSISFSIRCL
Sbjct: 446 FNFFLTAPVVCSLDRSTADPFPHPGFCLLDKLSFSSSSTLVFAIRAIFPTSSISFSIRCL 267
Query: 332 IAFMELAFVTXXDSSFAVWSLFNRFDSFAIILSIASTFFKKSFKLXXXXXXXXXXXXXXS 153
IAFM LAFVT DSSFA WSL RF S I LSI STFFKK FKL S
Sbjct: 266 IAFMALAFVTAFDSSFADWSLVKRFVSLTIRLSIPSTFFKKPFKLSEASG*CIPISTSPS 87
Query: 152 LEESRRGSSKESVRRLFM 99
LEESRRGSS ESV RLFM
Sbjct: 86 LEESRRGSSNESVSRLFM 33
Score = 279 bits (603), Expect = 3e-074
Identities = 127/196 (64%), Positives = 144/196 (73%)
Frame = -2 / -3
Query: 687 LMLDSIFEYLLTFSGLYQVINCLFIRTITSYSKNPSFDNLSILLPDCFSQGLKIIHPFLQ 508
L+L+SIFE LLT L +IN LFIR ITSYSK PSF+N +LLPD FSQ LKI+HPFLQ
Sbjct: 621 LLLNSIFENLLTPPCLD*IINSLFIRAITSYSKYPSFNNFPVLLPD*FSQYLKIVHPFLQ 442
Query: 507 FLFHCXXXXXXXSVHGRTLSTSRFLPIR*VISFQFINFCLCLRSNFPHFINIFLHPLLNC 328
FLF C S++ R L SRFLP+R*VI FQFINF C SNFPHFINIFLH LLNC
Sbjct: 441 FLFDCSSSLFS*SIYCRPLPASRFLPVR*VIFFQFINFGFCHTSNFPHFINIFLHSLLNC 262
Query: 327 FHGTCFCNXXGFLICSXELIQ*I*QLCNYTLNCIDLLQEIFQVV*SISLMHSHFNICVS* 148
FHGTCFCN FL+C EL Q I QL LN I+LLQE F ++ SI LMHSHFN+ +S*
Sbjct: 261 FHGTCFCNCF*FLVCRLELSQEIRQLNY*ALNSINLLQEAF*IIRSIRLMHSHFNVPIS* 82
Query: 147 GVPPRELKGIREEVVH 100
G+PPR+LK I E VVH
Sbjct: 81 GIPPRKLK*IGE*VVH 34
Score = 170 bits (366), Expect(2) = 1e-054
Identities = 80/118 (67%), Positives = 91/118 (77%)
Frame = +2 / +2
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*R 514
SS WRKILMKWGKLL+ Q+ KLMNWK+ITY G+NLD R L DQE++LLEQ KRN*R
Sbjct: 269 SSEWRKILMKWGKLLVWQKPKLMNWKKITYLTGRNLDAGRGLQ*IDQENRLLEQSKRN*R 448
Query: 515 NGWMIFRP*EKQSGKSIERLSKEGFLL*LVIVLMKRQLMT**RPEKVSKYSKMLSNIR 688
NGW IFR *E QSG+S +L KEG+LL*LVI LMKR LM * R VSK+SKML + R
Sbjct: 449 NGWTIFRY*ENQSGRSTGKLLKEGYLL*LVIALMKRLLMI*SRQGGVSKFSKMLFSSR 622
Score = 135 bits (289), Expect(2) = 1e-053
Identities = 66/95 (69%), Positives = 72/95 (75%)
Frame = +3 / +3
Query: 93 RRHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE* 272
RRHEQP H F+*A SAG LKR *NGNAS *CF +R LEEG N*E N A +S++*
Sbjct: 27 RRHEQPTHRFI*ASSAGFLKRWGR*NGNASA*CF**FKRLLEEG*WN*EPNS*ADESLD* 206
Query: 273 APXCK*GIXXSYKSKFHESN*AADGERY**SGENC 377
AP CK GI SYKSK HESN*AA+GERY**SGENC
Sbjct: 207 APVCKRGIKSSYKSKCHESN*AANGERY**SGENC 311
Score = 114 bits (244), Expect(2) = 3e-041
Identities = 58/85 (68%), Positives = 60/85 (70%)
Frame = -1 / -2
Query: 607 DYQLQ*KPFFRQPLDTLA*LLLSRSENHPSVPSISFSLLQ*FALLIGPRQNPFHIQVFAY 428
DYQLQ* PFF+Q T A L+LS EN PSVPSISF LLQ* LLI Q P IQV A
Sbjct: 541 DYQLQ*IPFFQQLPGTPAGLILSIPENRPSVPSISF*LLQ*SVLLIDLLQTPSRIQVSAC 362
Query: 427 SIGYLFPVHQLLSLPEEQFSPLHQY 353
I YLFPVHQL LP EQFSPLHQY
Sbjct: 361 *ISYLFPVHQLWFLPYEQFSPLHQY 287
Score = 95.5 bits (202), Expect(2) = 1e-053
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3 / +3
Query: 432 AKTWMWKGFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQARVSRGCRKKGFYCNW*SS 611
A+TWM +G C IKR +YWSS+KEIEGTDG FS +ER N A V C KKG YCNW*S
Sbjct: 366 AETWMREGVCSRSIKRTDYWSSQKEIEGTDGRFSGIERINPAGVPGSC*KKGIYCNW*SP 545
Query: 612 ** 617
**
Sbjct: 546 ** 551
Score = 74.8 bits (157), Expect(2) = 3e-041
Identities = 36/59 (61%), Positives = 41/59 (69%)
Frame = -1 / -2
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGAQRN 119
IP LQ GA S D +A L SQ H+PSSR+L + KHQ DAFPFQ LLR+PAE AQ N
Sbjct: 229 IPRLQTGA*SRDSSA*LLGSQFHQPSSRSLLNYQKHQADAFPFQRPHLLRNPAEEAQMN 53
Score = 63.4 bits (132), Expect(2) = 1e-054
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +2 / +2
Query: 137 GGTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
GG PQE LKWECI LML *K S*RR M+LR * S +I *+SS LQ RN
Sbjct: 71 GGIPQEMGTLKWECISLMLLII*KAS*RRLMELRA**LS*RIS*LSSSLQTRN 229
>gb|BU986297.1|BU986297 HF11F11r HF Hordeum vulgare subsp. vulgare cDNA clone HF11F11
5-PRIME, mRNA sequence
Length = 621
Score = 375 bits (813), Expect = e-103
Identities = 163/193 (84%), Positives = 171/193 (88%)
Frame = +1 / +2
Query: 94 AAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNK 273
AAMNNLLTDSFELPRRDSSRD D+EMGMHQ DASDNLK FLKKVD IES+I KL+NLL K
Sbjct: 41 AAMNNLLTDSFELPRRDSSRDGDVEMGMHQPDASDNLKGFLKKVDGIESLIVKLTNLLTK 220
Query: 274 LXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGK 453
L +ANEES VTKAS+MKAIKQRMEKDIDEVGKIA AKTKVDELE+DNLSNRQKPGCGK
Sbjct: 221 LQSANEESKAVTKASAMKAIKQRMEKDIDEVGKIARMAKTKVDELEKDNLSNRQKPGCGK 400
Query: 454 GSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDD 633
GSAVDRSREQTTGAVKKKLKERMDDFQ LRE+IRQ FTVTGNRPDEETIDD
Sbjct: 401 GSAVDRSREQTTGAVKKKLKERMDDFQVLRESIRQEYREVVERRVFTVTGNRPDEETIDD 580
Query: 634 LIETGKSEQIFKD 672
LIETG+SEQIFKD
Sbjct: 581 LIETGRSEQIFKD 619
Score = 295 bits (639), Expect = 3e-079
Identities = 139/192 (72%), Positives = 141/192 (73%)
Frame = -3 / -1
Query: 674 ASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFT 495
ASL ICSL P SGRLPVTV TLLSTTSRYSC I SL *KSSIRSFNFF T
Sbjct: 621 ASLKICSLLPVSIKSSIVSSSGRLPVTVNTLLSTTSRYSCRIDSLNT*KSSIRSFNFFLT 442
Query: 494 APVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMEL 315
APVVCSLDRSTA+PFPHPGFCL D+LS SSSST VFA AIFPTSSISFSIRCLIAFM L
Sbjct: 441 APVVCSLDRSTADPFPHPGFCLLDKLSFSSSSTLVFAIRAIFPTSSISFSIRCLIAFMAL 262
Query: 314 AFVTXXDSSFAVWSLFNRFDSFAIILSIASTFFKKSFKLXXXXXXXXXXXXXXSLEESRR 135
AFVT DSSFA WSL RF S I LSI STFFKK FKL SLEESRR
Sbjct: 261 AFVTAFDSSFADWSLVKRFVSLTIRLSIPSTFFKKPFKLSEASG*CIPISTSPSLEESRR 82
Query: 134 GSSKESVRRLFM 99
GSS ESV RLFM
Sbjct: 81 GSSNESVSRLFM 46
Score = 272 bits (588), Expect = 3e-072
Identities = 124/191 (64%), Positives = 139/191 (72%)
Frame = -2 / -3
Query: 672 IFEYLLTFSGLYQVINCLFIRTITSYSKNPSFDNLSILLPDCFSQGLKIIHPFLQFLFHC 493
IFE LLT L +IN LFIR ITSYSK PSF+N +LLPD FSQ LKI+HPFLQFLF C
Sbjct: 619 IFENLLTPPCLD*IINSLFIRAITSYSKYPSFNNFPVLLPD*FSQYLKIVHPFLQFLFDC 440
Query: 492 XXXXXXXSVHGRTLSTSRFLPIR*VISFQFINFCLCLRSNFPHFINIFLHPLLNCFHGTC 313
S++ R L SRFLP+R*VI FQFINF C SNFPHFINIFLH LLNCFHGTC
Sbjct: 439 SSSLFS*SIYCRPLPASRFLPVR*VIFFQFINFGFCHTSNFPHFINIFLHSLLNCFHGTC 260
Query: 312 FCNXXGFLICSXELIQ*I*QLCNYTLNCIDLLQEIFQVV*SISLMHSHFNICVS*GVPPR 133
FCN FL+C EL Q I QL LN I+LLQE F ++ SI LMHSHFN+ +S*G+PPR
Sbjct: 259 FCNCF*FLVCRLELSQEIRQLNY*ALNSINLLQEAF*IIRSIRLMHSHFNVPIS*GIPPR 80
Query: 132 ELKGIREEVVH 100
+LK I E VVH
Sbjct: 79 KLK*IGE*VVH 47
Score = 167 bits (360), Expect(2) = 1e-053
Identities = 78/113 (69%), Positives = 88/113 (77%)
Frame = +2 / +3
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*R 514
SS WRKILMKWGKLL+ Q+ KLMNWK+ITY G+NLD R L DQE++LLEQ KRN*R
Sbjct: 282 SSEWRKILMKWGKLLVWQKPKLMNWKKITYLTGRNLDAGRGLQ*IDQENRLLEQSKRN*R 461
Query: 515 NGWMIFRP*EKQSGKSIERLSKEGFLL*LVIVLMKRQLMT**RPEKVSKYSKM 673
NGW IFR *E QSG+S +L KEG+LL*LVI LMKR LM * R VSK+SKM
Sbjct: 462 NGWTIFRY*ENQSGRSTGKLLKEGYLL*LVIALMKRLLMI*SRQGGVSKFSKM 620
Score = 135 bits (289), Expect(2) = 1e-053
Identities = 66/95 (69%), Positives = 72/95 (75%)
Frame = +3 / +1
Query: 93 RRHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE* 272
RRHEQP H F+*A SAG LKR *NGNAS *CF +R LEEG N*E N A +S++*
Sbjct: 40 RRHEQPTHRFI*ASSAGFLKRWGR*NGNASA*CF**FKRLLEEG*WN*EPNS*ADESLD* 219
Query: 273 APXCK*GIXXSYKSKFHESN*AADGERY**SGENC 377
AP CK GI SYKSK HESN*AA+GERY**SGENC
Sbjct: 220 APVCKRGIKSSYKSKCHESN*AANGERY**SGENC 324
Score = 114 bits (244), Expect(2) = 3e-041
Identities = 58/85 (68%), Positives = 60/85 (70%)
Frame = -1 / -2
Query: 607 DYQLQ*KPFFRQPLDTLA*LLLSRSENHPSVPSISFSLLQ*FALLIGPRQNPFHIQVFAY 428
DYQLQ* PFF+Q T A L+LS EN PSVPSISF LLQ* LLI Q P IQV A
Sbjct: 554 DYQLQ*IPFFQQLPGTPAGLILSIPENRPSVPSISF*LLQ*SVLLIDLLQTPSRIQVSAC 375
Query: 427 SIGYLFPVHQLLSLPEEQFSPLHQY 353
I YLFPVHQL LP EQFSPLHQY
Sbjct: 374 *ISYLFPVHQLWFLPYEQFSPLHQY 300
Score = 95.5 bits (202), Expect(2) = 1e-053
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3 / +1
Query: 432 AKTWMWKGFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQARVSRGCRKKGFYCNW*SS 611
A+TWM +G C IKR +YWSS+KEIEGTDG FS +ER N A V C KKG YCNW*S
Sbjct: 379 AETWMREGVCSRSIKRTDYWSSQKEIEGTDGRFSGIERINPAGVPGSC*KKGIYCNW*SP 558
Query: 612 ** 617
**
Sbjct: 559 ** 564
Score = 74.8 bits (157), Expect(2) = 3e-041
Identities = 36/59 (61%), Positives = 41/59 (69%)
Frame = -1 / -2
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGAQRN 119
IP LQ GA S D +A L SQ H+PSSR+L + KHQ DAFPFQ LLR+PAE AQ N
Sbjct: 242 IPRLQTGA*SRDSSA*LLGSQFHQPSSRSLLNYQKHQADAFPFQRPHLLRNPAEEAQMN 66
Score = 63.4 bits (132), Expect(2) = 1e-053
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +2 / +3
Query: 137 GGTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
GG PQE LKWECI LML *K S*RR M+LR * S +I *+SS LQ RN
Sbjct: 84 GGIPQEMGTLKWECISLMLLII*KAS*RRLMELRA**LS*RIS*LSSSLQTRN 242
>gb|BG418473.2|BG418473 HVSMEk0022N01f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0022N01f, mRNA sequence
Length = 821
Score = 363 bits (786), Expect(2) = e-100
Identities = 153/174 (87%), Positives = 160/174 (91%)
Frame = +1 / +1
Query: 418 NLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTV 597
NLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQ LRE+IRQ FTV
Sbjct: 31 NLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQVLRESIRQEYREVVERRVFTV 210
Query: 598 TGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQ 777
TGNRPDEETIDDLIETG+SEQIFKDA+Q QGRGQ+LDTVAEIQERHDAVRDLERKLLELQ
Sbjct: 211 TGNRPDEETIDDLIETGRSEQIFKDAVQQQGRGQVLDTVAEIQERHDAVRDLERKLLELQ 390
Query: 778 QIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMCY 939
QIF+DMAVLVEAQGDMIN+IETHVSNATNHIQQGV AL NAKKLQ+NSRKWMCY
Sbjct: 391 QIFLDMAVLVEAQGDMINHIETHVSNATNHIQQGVGALHNAKKLQKNSRKWMCY 552
Score = 311 bits (674), Expect = 4e-084
Identities = 132/169 (78%), Positives = 137/169 (81%)
Frame = -3 / -1
Query: 926 FLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRS 747
FLEF CSFFA W A TPCCMWLVAF+T VSM LIMSP AST TA+S NICCNSRSFLSRS
Sbjct: 539 FLEFFCSFFALWRAPTPCCMWLVAFDTCVSMWLIMSP*ASTSTAISRNICCNSRSFLSRS 360
Query: 746 LTASCRSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTS 567
LTASCRSCISATVS+ WPLP C ASL ICSL P SGRLPVTV TLLSTTS
Sbjct: 359 LTASCRSCISATVSNTWPLPCC*TASLKICSLLPVSIKSSIVSSSGRLPVTVNTLLSTTS 180
Query: 566 RYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDR 420
RYSC I SL *KSSIRSFNFF TAPVVCSLDRSTA+PFPHPGFCL D+
Sbjct: 179 RYSCRIDSLNT*KSSIRSFNFFLTAPVVCSLDRSTADPFPHPGFCLLDK 33
Score = 190 bits (409), Expect = 1e-047
Identities = 92/144 (63%), Positives = 107/144 (74%)
Frame = +2 / +2
Query: 389 RQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*RNGWMIFRP*EKQSGKSIE 568
+ K+ ++ TY G+NLD R L DQE++LLEQ KRN*RNGW IFR *E QSG+S
Sbjct: 2 KTKVDELEKETYLTGRNLDAGRGLQ*IDQENRLLEQSKRN*RNGWTIFRY*ENQSGRSTG 181
Query: 569 RLSKEGFLL*LVIVLMKRQLMT**RPEKVSKYSKMLSNIREEARY*TLLLKYRSDMML*G 748
+L KEG+LL*LVI LMKR LM * R VSK+SKML + R EARY TLLL+YRS MML*
Sbjct: 182 KLLKEGYLL*LVIALMKRLLMI*SRQGGVSKFSKMLFSSRGEARYWTLLLRYRSGMML*E 361
Query: 749 I*RGSFWSCNRYSWTWQFLLRRKE 820
I*RGSFWS +RYSW WQ+ LR KE
Sbjct: 362 I*RGSFWSYSRYSWIWQYWLRLKE 433
Score = 151 bits (324), Expect(2) = 4e-055
Identities = 72/111 (64%), Positives = 81/111 (72%)
Frame = -2 / -3
Query: 750 IPYSIMSLLYFSNSV*YLASSLMLDSIFEYLLTFSGLYQVINCLFIRTITSYSKNPSFDN 571
I YSIM LLY SNSV YLAS L+L+SIFE LLT L +IN LFIR ITSYSK PSF+N
Sbjct: 363 ISYSIMPLLYLSNSVQYLASPLLLNSIFENLLTPPCLD*IINSLFIRAITSYSKYPSFNN 184
Query: 570 LSILLPDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRTLSTSRFLPIR*V 418
+LLPD FSQ LKI+HPFLQFLF C S++ R L SRFLP+R*V
Sbjct: 183 FPVLLPD*FSQYLKIVHPFLQFLFDCSSSLFS*SIYCRPLPASRFLPVR*V 31
Score = 122 bits (260), Expect(4) = 1e-057
Identities = 48/75 (64%), Positives = 59/75 (78%)
Frame = +3 / +3
Query: 648 KK*ANIQRCYPTSGKRPDTRHCC*NTGAT*CCKGSREEASGVATDIHGHGSSC*GARRHD 827
++*AN QRC +G+RP HCC*+TGA *CCK SREEASGV DI G+GS+ *G+RRHD
Sbjct: 261 EE*ANFQRCCSAAGERPGIGHCC*DTGAA*CCKRSREEASGVTADIPGYGSTG*GSRRHD 440
Query: 828 QQHRDPCLERHQPHT 872
Q HRD C++ +QPHT
Sbjct: 441 QPHRDTCVKCYQPHT 485
Score = 95.5 bits (202), Expect(4) = 1e-057
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3 / +3
Query: 432 AKTWMWKGFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQARVSRGCRKKGFYCNW*SS 611
A+TWM +G C IKR +YWSS+KEIEGTDG FS +ER N A V C KKG YCNW*S
Sbjct: 45 AETWMREGVCSRSIKRTDYWSSQKEIEGTDGRFSGIERINPAGVPGSC*KKGIYCNW*SP 224
Query: 612 ** 617
**
Sbjct: 225 ** 230
Score = 84.5 bits (178), Expect(2) = 4e-055
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = -2 / -3
Query: 942 GVAHPLPRIPLQFLRVLERAHTLLYVVGGVRDMGLDVVDHVSLRLNKNCHVHEY 781
GVAHPL R+ LQ L V+E AHTLLYVVG + M L VVDHVSL LN+ CH+ EY
Sbjct: 555 GVAHPLSRVLLQLLCVMESAHTLLYVVGSI*HMCLYVVDHVSLSLNQYCHIQEY 394
Score = 79.9 bits (168), Expect(3) = 1e-031
Identities = 37/56 (66%), Positives = 38/56 (67%)
Frame = -1 / -2
Query: 820 LLAPQQELPCP*ISVATPEASSLDPLQHHVAPVFQQQCLVSGLFPDVG*HL*IFAH 653
LL PQ LP P IS TPEASSLD LQHH APV QQQC + GL P HL* FAH
Sbjct: 433 LLEPQPVLPYPGISAVTPEASSLDLLQHHAAPVSQQQCPIPGLSPAAEQHL*KFAH 266
Score = 72.5 bits (152), Expect(3) = 1e-031
Identities = 40/66 (60%), Positives = 43/66 (65%)
Frame = -1 / -2
Query: 607 DYQLQ*KPFFRQPLDTLA*LLLSRSENHPSVPSISFSLLQ*FALLIGPRQNPFHIQVFAY 428
DYQLQ* PFF+Q T A L+LS EN PSVPSISF LLQ* LLI Q P IQV A
Sbjct: 220 DYQLQ*IPFFQQLPGTPAGLILSIPENRPSVPSISF*LLQ*SVLLIDLLQTPSRIQVSAC 41
Query: 427 SIGYLF 410
I + F
Sbjct: 40 *ISFFF 23
Score = 38.2 bits (77), Expect(4) = 1e-057
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +2
Query: 869 YSKV*ARSRTRRNCRGIRGSGCATP 943
Y+KV A S T+R+CR R SGCATP
Sbjct: 482 YNKVWALSITQRSCRRTRESGCATP 556
Score = 25.4 bits (49), Expect(4) = 1e-057
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1 / +2
Query: 388 KTKVDELERDNLSNRQKPGCGKG 456
KTKVDELE++ + G+G
Sbjct: 2 KTKVDELEKETYLTGRNLDAGRG 70
Score = 22.6 bits (43), Expect(3) = 1e-031
Identities = 7/28 (25%), Positives = 7/28 (25%)
Frame = -1 / -2
Query: 943 WXXXXXXXXXXXXXXXXXXXSHLAVCGW 860
W HL VCGW
Sbjct: 556 WRSTSTFSSSSAASLRYGERPHLVVCGW 473
Score = 22.1 bits (42), Expect(2) = e-100
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 927 VDVLRHHHTAGD 962
VDVLRH ++GD
Sbjct: 540 VDVLRHDASSGD 575
>gb|BG343506.2|BG343506 HVSMEg0005P06f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005P06f, mRNA sequence
Length = 978
Score = 330 bits (716), Expect(2) = 6e-097
Identities = 145/178 (81%), Positives = 153/178 (85%)
Frame = +1 / +3
Query: 94 AAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNK 273
AAMNNLLTDSFELPRRDSSRD D+EMGMHQ DASDNLK FLKKVD IES+IAKL+NLL K
Sbjct: 36 AAMNNLLTDSFELPRRDSSRDGDVEMGMHQPDASDNLKGFLKKVDGIESLIAKLTNLLTK 215
Query: 274 LXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGK 453
L +ANEES VTKAS+MKAIKQRMEKDIDEVGKIA AKTKVDELE+DNLSNRQKPGCGK
Sbjct: 216 LQSANEESKAVTKASAMKAIKQRMEKDIDEVGKIARMAKTKVDELEKDNLSNRQKPGCGK 395
Query: 454 GSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETI 627
GSAVDRSREQTTGAVKKKLKERMDDFQ LRE+IRQ T TG RPDEE +
Sbjct: 396 GSAVDRSREQTTGAVKKKLKERMDDFQVLRESIRQEYREVVERRVXTXTGYRPDEELL 569
Score = 276 bits (597), Expect(2) = 1e-076
Identities = 129/171 (75%), Positives = 131/171 (76%)
Frame = -3 / -3
Query: 611 GRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFC 432
GR PV V TLLSTTSRYSC I SL *KSSIRSFNFF TAPVVCSLDRSTA+PFPHPGFC
Sbjct: 553 GRYPVXVXTLLSTTSRYSCRIDSLNT*KSSIRSFNFFLTAPVVCSLDRSTADPFPHPGFC 374
Query: 431 LFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDS 252
L D+LS SSSST VFA AIFPTSSISFSIRCLIAFM LAFVT DSSFA WSL RF S
Sbjct: 373 LLDKLSFSSSSTLVFAIRAIFPTSSISFSIRCLIAFMALAFVTAFDSSFADWSLVKRFVS 194
Query: 251 FAIILSIASTFFKKSFKLXXXXXXXXXXXXXXSLEESRRGSSKESVRRLFM 99
AI LSI STFFKK FKL SLEESRRGSS ESV RLFM
Sbjct: 193 LAIRLSIPSTFFKKPFKLSEASG*CIPISTSPSLEESRRGSSNESVSRLFM 41
Score = 249 bits (539), Expect = 2e-065
Identities = 111/173 (64%), Positives = 125/173 (72%)
Frame = -2 / -2
Query: 618 FIRTITSYSKNPSFDNLSILLPDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRTLSTSR 439
FIR I S S PSF+N +LLPD FSQ LKI+HPFLQFLF C S++ R L SR
Sbjct: 560 FIRAIPSXSXYPSFNNFPVLLPD*FSQYLKIVHPFLQFLFDCSSSLFS*SIYCRPLPASR 381
Query: 438 FLPIR*VISFQFINFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFLICSXELIQ*I 259
FLP+R*VI FQFINF C SNFPHFINIFLH LLNCFHGTCFCN FL+C EL Q I
Sbjct: 380 FLPVR*VIFFQFINFGFCHTSNFPHFINIFLHSLLNCFHGTCFCNCF*FLVCRLELSQEI 201
Query: 258 *QLCNYTLNCIDLLQEIFQVV*SISLMHSHFNICVS*GVPPRELKGIREEVVH 100
QL LN I+LLQE F ++ SI LMHSHFN+ +S*G+PPR+LK I E VVH
Sbjct: 200 RQLSY*ALNSINLLQEAF*IIRSIRLMHSHFNVPIS*GIPPRKLK*IGE*VVH 42
Score = 142 bits (305), Expect(2) = 3e-046
Identities = 64/95 (67%), Positives = 73/95 (76%)
Frame = +2 / +1
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*R 514
SS WRKILMKWGKLL+ Q+ KLMNWK+ITY G+NLD R L DQE++LLEQ KRN*R
Sbjct: 277 SSEWRKILMKWGKLLVWQKPKLMNWKKITYLTGRNLDAGRGLQ*IDQENRLLEQSKRN*R 456
Query: 515 NGWMIFRP*EKQSGKSIERLSKEGFLL*LVIVLMK 619
NGW IFR *E QSG+S +L KEG+ L L I LMK
Sbjct: 457 NGWTIFRY*ENQSGRSTGKLLKEGYXLXLGIALMK 561
Score = 135 bits (289), Expect(2) = 4e-050
Identities = 66/95 (69%), Positives = 72/95 (75%)
Frame = +3 / +2
Query: 93 RRHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE* 272
RRHEQP H F+*A SAG LKR *NGNAS *CF +R LEEG N*E N A +S++*
Sbjct: 35 RRHEQPTHRFI*ASSAGFLKRWGR*NGNASA*CF**FKRLLEEG*WN*EPNS*ADESLD* 214
Query: 273 APXCK*GIXXSYKSKFHESN*AADGERY**SGENC 377
AP CK GI SYKSK HESN*AA+GERY**SGENC
Sbjct: 215 APVCKRGIKSSYKSKCHESN*AANGERY**SGENC 319
Score = 105 bits (225), Expect(2) = 1e-038
Identities = 55/85 (64%), Positives = 57/85 (67%)
Frame = -1 / -1
Query: 607 DYQLQ*KPFFRQPLDTLA*LLLSRSENHPSVPSISFSLLQ*FALLIGPRQNPFHIQVFAY 428
D Q Q PFF+Q T A L+LS EN PSVPSISF LLQ* LLI Q P IQV A
Sbjct: 549 DTQXQXIPFFQQLPGTPAGLILSIPENRPSVPSISF*LLQ*SVLLIDLLQTPSRIQVSAC 370
Query: 427 SIGYLFPVHQLLSLPEEQFSPLHQY 353
I YLFPVHQL LP EQFSPLHQY
Sbjct: 369 *ISYLFPVHQLWFLPYEQFSPLHQY 295
Score = 84.0 bits (177), Expect(2) = 4e-050
Identities = 37/62 (59%), Positives = 42/62 (67%)
Frame = +3 / +2
Query: 432 AKTWMWKGFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQARVSRGCRKKGFYCNW*SS 611
A+TWM +G C IKR +YWSS+KEIEGTDG FS +ER N A V C KKG Y W S
Sbjct: 374 AETWMREGVCSRSIKRTDYWSSQKEIEGTDGRFSGIERINPAGVPGSC*KKGXYXYWVSP 553
Query: 612 ** 617
**
Sbjct: 554 ** 559
Score = 74.8 bits (157), Expect(2) = 1e-038
Identities = 36/59 (61%), Positives = 41/59 (69%)
Frame = -1 / -1
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGAQRN 119
IP LQ GA S D +A L SQ H+PSSR+L + KHQ DAFPFQ LLR+PAE AQ N
Sbjct: 237 IPRLQTGA*SRDSSA*LLGSQFHQPSSRSLLNYQKHQADAFPFQRPHLLRNPAEEAQMN 61
Score = 63.4 bits (132), Expect(2) = 3e-046
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +2 / +1
Query: 137 GGTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
GG PQE LKWECI LML *K S*RR M+LR * S +I *+SS LQ RN
Sbjct: 79 GGIPQEMGTLKWECISLMLLII*KAS*RRLMELRA**LS*RIS*LSSSLQTRN 237
Score = 44.6 bits (91), Expect(2) = 6e-097
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +1 / +2
Query: 622 TIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEI 723
TID L ETG+SE I +GRGQ+LDT AEI
Sbjct: 563 TIDXLXETGRSEXISXMLXSSRGRGQVLDTXAEI 664
Score = 31.3 bits (62), Expect(2) = 1e-076
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3 / -1
Query: 722 ISATVSSIWPLP*CWIASLNICSLFP 645
ISA VS+ WPLP + CSL P
Sbjct: 663 ISAXVSNTWPLPLLLXSIXEXCSLLP 586
>gb|BM372329.2|BM372329 EBro03_SQ004_K14_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_K14 5', mRNA sequence
Length = 568
Score = 353 bits (765), Expect = 1e-096
Identities = 154/184 (83%), Positives = 162/184 (88%)
Frame = +1 / +2
Query: 94 AAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNK 273
AAMNNLLTDSFELPRRDSSRD D+EMGMHQ DASDNLK FLKKVD IES+I KL+NLL K
Sbjct: 17 AAMNNLLTDSFELPRRDSSRDGDVEMGMHQPDASDNLKGFLKKVDGIESLIVKLTNLLTK 196
Query: 274 LXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGK 453
L +ANEES VTKAS+MKAIKQRMEKDIDEVGKIA AKTKVDELE+DNLSNRQKPGCGK
Sbjct: 197 LQSANEESKAVTKASAMKAIKQRMEKDIDEVGKIARMAKTKVDELEKDNLSNRQKPGCGK 376
Query: 454 GSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDD 633
GSAV+RSREQTTGAVKKKLKERMDDFQ LRE+IRQ FTVTGNRPDEETIDD
Sbjct: 377 GSAVNRSREQTTGAVKKKLKERMDDFQVLRESIRQEYREVVERRVFTVTGNRPDEETIDD 556
Query: 634 LIET 645
LIET
Sbjct: 557 LIET 568
Score = 276 bits (598), Expect = 1e-073
Identities = 129/171 (75%), Positives = 131/171 (76%)
Frame = -3 / -2
Query: 611 GRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFC 432
GRLPVTV TLLSTTSRYSC I SL *KSSIRSFNFF TAPVVCSLDR TA+PFPHPGFC
Sbjct: 534 GRLPVTVNTLLSTTSRYSCRIDSLNT*KSSIRSFNFFLTAPVVCSLDRFTADPFPHPGFC 355
Query: 431 LFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDS 252
L D+LS SSSST VFA AIFPTSSISFSIRCLIAFM LAFVT DSSFA WSL RF S
Sbjct: 354 LLDKLSFSSSSTLVFAIRAIFPTSSISFSIRCLIAFMALAFVTAFDSSFADWSLVKRFVS 175
Query: 251 FAIILSIASTFFKKSFKLXXXXXXXXXXXXXXSLEESRRGSSKESVRRLFM 99
I LSI STFFKK FKL SLEESRRGSS ESV RLFM
Sbjct: 174 LTIRLSIPSTFFKKPFKLSEASG*CIPISTSPSLEESRRGSSNESVSRLFM 22
Score = 265 bits (573), Expect = 4e-070
Identities = 117/178 (65%), Positives = 132/178 (74%)
Frame = -2 / -1
Query: 633 VINCLFIRTITSYSKNPSFDNLSILLPDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRT 454
+IN LFIR ITSYSK PSF+N +LLPD FSQ LKI+HPFLQFLF C S++ R
Sbjct: 556 IINSLFIRAITSYSKYPSFNNFPVLLPD*FSQYLKIVHPFLQFLFDCSSSLFS*SIYCRP 377
Query: 453 LSTSRFLPIR*VISFQFINFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFLICSXE 274
L SRFLP+R*VI FQFINF C SNFPHFINIFLH LLNCFHGTCFCN FL+C E
Sbjct: 376 LPASRFLPVR*VIFFQFINFGFCHTSNFPHFINIFLHSLLNCFHGTCFCNCF*FLVCRLE 197
Query: 273 LIQ*I*QLCNYTLNCIDLLQEIFQVV*SISLMHSHFNICVS*GVPPRELKGIREEVVH 100
L Q I QL LN I+LLQE F ++ SI LMHSHFN+ +S*G+PPR+LK I E VVH
Sbjct: 196 LSQEIRQLNY*ALNSINLLQEAF*IIRSIRLMHSHFNVPIS*GIPPRKLK*IGE*VVH 23
Score = 156 bits (335), Expect(2) = 3e-050
Identities = 72/103 (69%), Positives = 81/103 (78%)
Frame = +2 / +3
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*R 514
SS WRKILMKWGKLL+ Q+ KLMNWK+ITY G+NLD R L DQE++LLEQ KRN*R
Sbjct: 258 SSEWRKILMKWGKLLVWQKPKLMNWKKITYLTGRNLDAGRGLQ*IDQENRLLEQSKRN*R 437
Query: 515 NGWMIFRP*EKQSGKSIERLSKEGFLL*LVIVLMKRQLMT**R 643
NGW IFR *E QSG+S +L KEG+LL*LVI LMKR LM * R
Sbjct: 438 NGWTIFRY*ENQSGRSTGKLLKEGYLL*LVIALMKRLLMI*SR 566
Score = 135 bits (289), Expect(2) = 1e-053
Identities = 66/95 (69%), Positives = 72/95 (75%)
Frame = +3 / +1
Query: 93 RRHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE* 272
RRHEQP H F+*A SAG LKR *NGNAS *CF +R LEEG N*E N A +S++*
Sbjct: 16 RRHEQPTHRFI*ASSAGFLKRWGR*NGNASA*CF**FKRLLEEG*WN*EPNS*ADESLD* 195
Query: 273 APXCK*GIXXSYKSKFHESN*AADGERY**SGENC 377
AP CK GI SYKSK HESN*AA+GERY**SGENC
Sbjct: 196 APVCKRGIKSSYKSKCHESN*AANGERY**SGENC 300
Score = 114 bits (244), Expect(2) = 3e-041
Identities = 58/85 (68%), Positives = 60/85 (70%)
Frame = -1 / -3
Query: 607 DYQLQ*KPFFRQPLDTLA*LLLSRSENHPSVPSISFSLLQ*FALLIGPRQNPFHIQVFAY 428
DYQLQ* PFF+Q T A L+LS EN PSVPSISF LLQ* LLI Q P IQV A
Sbjct: 530 DYQLQ*IPFFQQLPGTPAGLILSIPENRPSVPSISF*LLQ*SVLLIDLLQTPSRIQVSAC 351
Query: 427 SIGYLFPVHQLLSLPEEQFSPLHQY 353
I YLFPVHQL LP EQFSPLHQY
Sbjct: 350 *ISYLFPVHQLWFLPYEQFSPLHQY 276
Score = 95.5 bits (202), Expect(2) = 1e-053
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3 / +1
Query: 432 AKTWMWKGFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQARVSRGCRKKGFYCNW*SS 611
A+TWM +G C IKR +YWSS+KEIEGTDG FS +ER N A V C KKG YCNW*S
Sbjct: 355 AETWMREGVCSKSIKRTDYWSSQKEIEGTDGRFSGIERINPAGVPGSC*KKGIYCNW*SP 534
Query: 612 ** 617
**
Sbjct: 535 ** 540
Score = 74.8 bits (157), Expect(2) = 3e-041
Identities = 36/59 (61%), Positives = 41/59 (69%)
Frame = -1 / -3
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGAQRN 119
IP LQ GA S D +A L SQ H+PSSR+L + KHQ DAFPFQ LLR+PAE AQ N
Sbjct: 218 IPRLQTGA*SRDSSA*LLGSQFHQPSSRSLLNYQKHQADAFPFQRPHLLRNPAEEAQMN 42
Score = 63.4 bits (132), Expect(2) = 3e-050
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +2 / +3
Query: 137 GGTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
GG PQE LKWECI LML *K S*RR M+LR * S +I *+SS LQ RN
Sbjct: 60 GGIPQEMGTLKWECISLMLLII*KAS*RRLMELRA**LS*RIS*LSSSLQTRN 218
>gb|BI958288.1|BI958288 HVSMEn0014E05f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014E05f, mRNA sequence
Length = 661
Score = 349 bits (757), Expect(2) = 2e-096
Identities = 153/185 (82%), Positives = 161/185 (87%)
Frame = +1 / +1
Query: 94 AAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNK 273
AAMNNLLTDSFELPRRDSSRD D+EMGMHQ DASDNLK FLKKVD IES+IAKL+NLL K
Sbjct: 16 AAMNNLLTDSFELPRRDSSRDGDVEMGMHQPDASDNLKGFLKKVDGIESLIAKLTNLLTK 195
Query: 274 LXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGK 453
L +ANEES VTKAS+MKAIK RMEKDIDEVGKIA AKTKVDELE+DNLSNRQKPGCGK
Sbjct: 196 LQSANEESKAVTKASAMKAIKHRMEKDIDEVGKIARMAKTKVDELEKDNLSNRQKPGCGK 375
Query: 454 GSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDD 633
GSAVDRSRE TTGAVKKKLKERMDDFQ LRE+IRQ TVTGNRPDE+TIDD
Sbjct: 376 GSAVDRSREXTTGAVKKKLKERMDDFQVLRESIRQEYREVVERRVCTVTGNRPDEKTIDD 555
Query: 634 LIETG 648
LIETG
Sbjct: 556 LIETG 570
Score = 281 bits (608), Expect(2) = 3e-076
Identities = 133/183 (72%), Positives = 135/183 (73%)
Frame = -3 / -3
Query: 647 PXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDR 468
P SGRLPVTV TLLSTTSRYSC I SL *KSSIRSFNFF TAPVVCSLDR
Sbjct: 569 PVSIKSSIVFSSGRLPVTVHTLLSTTSRYSCRIDSLNT*KSSIRSFNFFLTAPVVCSLDR 390
Query: 467 STAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSS 288
STA+PFPHPGFCL D+LS SSSST VFA AIFPTSSISFSIRCLIAFM LAFVT DSS
Sbjct: 389 STADPFPHPGFCLLDKLSFSSSSTLVFAIRAIFPTSSISFSIRCLIAFMALAFVTAFDSS 210
Query: 287 FAVWSLFNRFDSFAIILSIASTFFKKSFKLXXXXXXXXXXXXXXSLEESRRGSSKESVRR 108
FA WSL RF S AI LSI STFFKK FKL SLEESRRGSS ESV R
Sbjct: 209 FADWSLVKRFVSLAIRLSIPSTFFKKPFKLSEASG*CIPISTSPSLEESRRGSSNESVSR 30
Query: 107 LFM 99
LFM
Sbjct: 29 LFM 21
Score = 262 bits (567), Expect = 2e-069
Identities = 116/178 (65%), Positives = 132/178 (74%)
Frame = -2 / -2
Query: 633 VINCLFIRTITSYSKNPSFDNLSILLPDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRT 454
+IN LFIR ITSYS PSF+N +LLPD FSQ LKI+HPFLQFLF C S++ R
Sbjct: 555 IINSLFIRAITSYSTYPSFNNFPVLLPD*FSQYLKIVHPFLQFLFDCSSSXFS*SIYCRP 376
Query: 453 LSTSRFLPIR*VISFQFINFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFLICSXE 274
L SRFLP+R*VI FQFINF C SNFPHFINIFLH +LNCFHGTCFCN FL+C E
Sbjct: 375 LPASRFLPVR*VIFFQFINFGFCHTSNFPHFINIFLHSMLNCFHGTCFCNCF*FLVCRLE 196
Query: 273 LIQ*I*QLCNYTLNCIDLLQEIFQVV*SISLMHSHFNICVS*GVPPRELKGIREEVVH 100
L Q I QL LN I+LLQE F ++ SI LMHSHFN+ +S*G+PPR+LK I E VVH
Sbjct: 195 LSQEIRQLSY*ALNSINLLQEAF*IIRSIRLMHSHFNVPIS*GIPPRKLK*IGE*VVH 22
Score = 150 bits (323), Expect(2) = 1e-048
Identities = 69/100 (69%), Positives = 78/100 (78%)
Frame = +2 / +2
Query: 344 WRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*RNGW 523
WRKILMKWGKLL+ Q+ KLMNWK+ITY G+NLD R L DQE+ LLEQ KRN*RNGW
Sbjct: 266 WRKILMKWGKLLVWQKPKLMNWKKITYLTGRNLDAGRGLQ*IDQENXLLEQSKRN*RNGW 445
Query: 524 MIFRP*EKQSGKSIERLSKEGFLL*LVIVLMKRQLMT**R 643
IFR *E QSG+S +L KEG++L*LVI LMKR LM * R
Sbjct: 446 TIFRY*ENQSGRSTGKLLKEGYVL*LVIALMKRLLMI*SR 565
Score = 133 bits (286), Expect(2) = 7e-053
Identities = 65/95 (68%), Positives = 72/95 (75%)
Frame = +3 / +3
Query: 93 RRHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE* 272
RRHEQP H F+*A SAG LKR *NGNAS *CF +R LEEG N*E N A +S++*
Sbjct: 15 RRHEQPTHRFI*ASSAGFLKRWGR*NGNASA*CF**FKRLLEEG*WN*EPNS*ADESLD* 194
Query: 273 APXCK*GIXXSYKSKFHESN*AADGERY**SGENC 377
AP CK GI SYKSK HESN*A++GERY**SGENC
Sbjct: 195 APVCKRGIKSSYKSKCHESN*ASNGERY**SGENC 299
Score = 112 bits (240), Expect(2) = 1e-040
Identities = 57/85 (67%), Positives = 59/85 (69%)
Frame = -1 / -1
Query: 607 DYQLQ*KPFFRQPLDTLA*LLLSRSENHPSVPSISFSLLQ*FALLIGPRQNPFHIQVFAY 428
DYQLQ PFF+Q T A L+LS EN PSVPSISF LLQ* LLI Q P IQV A
Sbjct: 529 DYQLQYIPFFQQLPGTPAGLILSIPENRPSVPSISF*LLQ*XVLLIDLLQTPSRIQVSAC 350
Query: 427 SIGYLFPVHQLLSLPEEQFSPLHQY 353
I YLFPVHQL LP EQFSPLHQY
Sbjct: 349 *ISYLFPVHQLWFLPYEQFSPLHQY 275
Score = 94.5 bits (200), Expect(2) = 7e-053
Identities = 40/62 (64%), Positives = 44/62 (70%)
Frame = +3 / +3
Query: 432 AKTWMWKGFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQARVSRGCRKKGFYCNW*SS 611
A+TWM +G C IKR YWSS+KEIEGTDG FS +ER N A V C KKG YCNW*S
Sbjct: 354 AETWMREGVCSRSIKRTXYWSSQKEIEGTDGRFSGIERINPAGVPGSC*KKGMYCNW*SP 533
Query: 612 ** 617
**
Sbjct: 534 ** 539
Score = 74.8 bits (157), Expect(2) = 1e-040
Identities = 36/59 (61%), Positives = 41/59 (69%)
Frame = -1 / -1
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGAQRN 119
IP LQ GA S D +A L SQ H+PSSR+L + KHQ DAFPFQ LLR+PAE AQ N
Sbjct: 217 IPRLQTGA*SRDSSA*LLGSQFHQPSSRSLLNYQKHQADAFPFQRPHLLRNPAEEAQMN 41
Score = 63.4 bits (132), Expect(2) = 1e-048
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +2 / +2
Query: 137 GGTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
GG PQE LKWECI LML *K S*RR M+LR * S +I *+SS LQ RN
Sbjct: 59 GGIPQEMGTLKWECISLMLLII*KAS*RRLMELRA**LS*RIS*LSSSLQTRN 217
Score = 24.9 bits (48), Expect(2) = 3e-076
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3 / -2
Query: 734 CRSCISATVSSIWPLP*CW 678
CRSCIS+ I L CW
Sbjct: 660 CRSCISSNSVHIPGLSPCW 604
Score = 24.0 bits (46), Expect(2) = 2e-096
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1 / +2
Query: 646 GKSEQIFKDAIQHQG 690
G SEQIFKDA G
Sbjct: 569 GASEQIFKDAGHQHG 613
>gb|BQ472155.1|BQ472155 HV04J02r HV Hordeum vulgare subsp. vulgare cDNA clone HV04J02
5-PRIME, mRNA sequence
Length = 565
Score = 351 bits (760), Expect = 6e-096
Identities = 153/182 (84%), Positives = 160/182 (87%)
Frame = +1 / +1
Query: 94 AAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNK 273
AAMNNLLTDSFELPRRDSSRD D+EMGMHQ DASDNLK FLKKVD IES+I KL+NLL K
Sbjct: 19 AAMNNLLTDSFELPRRDSSRDGDVEMGMHQPDASDNLKGFLKKVDGIESLIVKLTNLLTK 198
Query: 274 LXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGK 453
L +ANEES VTKAS+MKAIKQRMEKDIDEVGKIA AKTKVDELE+DNLSNRQKPGCGK
Sbjct: 199 LQSANEESKAVTKASAMKAIKQRMEKDIDEVGKIARMAKTKVDELEKDNLSNRQKPGCGK 378
Query: 454 GSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDD 633
GSAVDRSREQTTGAVKKKLKERMDDFQ LRE+IRQ FTVTGNRPDEETIDD
Sbjct: 379 GSAVDRSREQTTGAVKKKLKERMDDFQVLRESIRQEYREVVERRVFTVTGNRPDEETIDD 558
Query: 634 LI 639
LI
Sbjct: 559 LI 564
Score = 279 bits (604), Expect = 2e-074
Identities = 130/171 (76%), Positives = 132/171 (77%)
Frame = -3 / -3
Query: 611 GRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFC 432
GRLPVTV TLLSTTSRYSC I SL *KSSIRSFNFF TAPVVCSLDRSTA+PFPHPGFC
Sbjct: 536 GRLPVTVNTLLSTTSRYSCRIDSLNT*KSSIRSFNFFLTAPVVCSLDRSTADPFPHPGFC 357
Query: 431 LFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDS 252
L D+LS SSSST VFA AIFPTSSISFSIRCLIAFM LAFVT DSSFA WSL RF S
Sbjct: 356 LLDKLSFSSSSTLVFAIRAIFPTSSISFSIRCLIAFMALAFVTAFDSSFADWSLVKRFVS 177
Query: 251 FAIILSIASTFFKKSFKLXXXXXXXXXXXXXXSLEESRRGSSKESVRRLFM 99
I LSI STFFKK FKL SLEESRRGSS ESV RLFM
Sbjct: 176 LTIRLSIPSTFFKKPFKLSEASG*CIPISTSPSLEESRRGSSNESVSRLFM 24
Score = 265 bits (573), Expect = 4e-070
Identities = 117/178 (65%), Positives = 132/178 (74%)
Frame = -2 / -2
Query: 633 VINCLFIRTITSYSKNPSFDNLSILLPDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRT 454
+IN LFIR ITSYSK PSF+N +LLPD FSQ LKI+HPFLQFLF C S++ R
Sbjct: 558 IINSLFIRAITSYSKYPSFNNFPVLLPD*FSQYLKIVHPFLQFLFDCSSSLFS*SIYCRP 379
Query: 453 LSTSRFLPIR*VISFQFINFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFLICSXE 274
L SRFLP+R*VI FQFINF C SNFPHFINIFLH LLNCFHGTCFCN FL+C E
Sbjct: 378 LPASRFLPVR*VIFFQFINFGFCHTSNFPHFINIFLHSLLNCFHGTCFCNCF*FLVCRLE 199
Query: 273 LIQ*I*QLCNYTLNCIDLLQEIFQVV*SISLMHSHFNICVS*GVPPRELKGIREEVVH 100
L Q I QL LN I+LLQE F ++ SI LMHSHFN+ +S*G+PPR+LK I E VVH
Sbjct: 198 LSQEIRQLNY*ALNSINLLQEAF*IIRSIRLMHSHFNVPIS*GIPPRKLK*IGE*VVH 25
Score = 155 bits (334), Expect(2) = 4e-050
Identities = 70/99 (70%), Positives = 79/99 (79%)
Frame = +2 / +2
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*R 514
SS WRKILMKWGKLL+ Q+ KLMNWK+ITY G+NLD R L DQE++LLEQ KRN*R
Sbjct: 260 SSEWRKILMKWGKLLVWQKPKLMNWKKITYLTGRNLDAGRGLQ*IDQENRLLEQSKRN*R 439
Query: 515 NGWMIFRP*EKQSGKSIERLSKEGFLL*LVIVLMKRQLM 631
NGW IFR *E QSG+S +L KEG+LL*LVI LMKR LM
Sbjct: 440 NGWTIFRY*ENQSGRSTGKLLKEGYLL*LVIALMKRLLM 556
Score = 135 bits (289), Expect(2) = 1e-053
Identities = 66/95 (69%), Positives = 72/95 (75%)
Frame = +3 / +3
Query: 93 RRHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE* 272
RRHEQP H F+*A SAG LKR *NGNAS *CF +R LEEG N*E N A +S++*
Sbjct: 18 RRHEQPTHRFI*ASSAGFLKRWGR*NGNASA*CF**FKRLLEEG*WN*EPNS*ADESLD* 197
Query: 273 APXCK*GIXXSYKSKFHESN*AADGERY**SGENC 377
AP CK GI SYKSK HESN*AA+GERY**SGENC
Sbjct: 198 APVCKRGIKSSYKSKCHESN*AANGERY**SGENC 302
Score = 114 bits (244), Expect(2) = 3e-041
Identities = 58/85 (68%), Positives = 60/85 (70%)
Frame = -1 / -1
Query: 607 DYQLQ*KPFFRQPLDTLA*LLLSRSENHPSVPSISFSLLQ*FALLIGPRQNPFHIQVFAY 428
DYQLQ* PFF+Q T A L+LS EN PSVPSISF LLQ* LLI Q P IQV A
Sbjct: 532 DYQLQ*IPFFQQLPGTPAGLILSIPENRPSVPSISF*LLQ*SVLLIDLLQTPSRIQVSAC 353
Query: 427 SIGYLFPVHQLLSLPEEQFSPLHQY 353
I YLFPVHQL LP EQFSPLHQY
Sbjct: 352 *ISYLFPVHQLWFLPYEQFSPLHQY 278
Score = 95.5 bits (202), Expect(2) = 1e-053
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3 / +3
Query: 432 AKTWMWKGFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQARVSRGCRKKGFYCNW*SS 611
A+TWM +G C IKR +YWSS+KEIEGTDG FS +ER N A V C KKG YCNW*S
Sbjct: 357 AETWMREGVCSRSIKRTDYWSSQKEIEGTDGRFSGIERINPAGVPGSC*KKGIYCNW*SP 536
Query: 612 ** 617
**
Sbjct: 537 ** 542
Score = 74.8 bits (157), Expect(2) = 3e-041
Identities = 36/59 (61%), Positives = 41/59 (69%)
Frame = -1 / -1
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGAQRN 119
IP LQ GA S D +A L SQ H+PSSR+L + KHQ DAFPFQ LLR+PAE AQ N
Sbjct: 220 IPRLQTGA*SRDSSA*LLGSQFHQPSSRSLLNYQKHQADAFPFQRPHLLRNPAEEAQMN 44
Score = 63.4 bits (132), Expect(2) = 4e-050
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +2 / +2
Query: 137 GGTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
GG PQE LKWECI LML *K S*RR M+LR * S +I *+SS LQ RN
Sbjct: 62 GGIPQEMGTLKWECISLMLLII*KAS*RRLMELRA**LS*RIS*LSSSLQTRN 220
>gb|BF267575.2|BF267575 HV_CEa0018F03f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018F03f, mRNA sequence
Length = 867
Score = 325 bits (703), Expect(3) = 1e-095
Identities = 141/165 (85%), Positives = 148/165 (89%)
Frame = +1 / +3
Query: 274 LXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGK 453
L +ANEES VTKAS+MKAIKQRMEKDIDEVGKIA AKTKVDELE+DNLSNRQKPGCGK
Sbjct: 15 LQSANEESKAVTKASAMKAIKQRMEKDIDEVGKIARMAKTKVDELEKDNLSNRQKPGCGK 194
Query: 454 GSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDD 633
GSAVDRSREQTTGAVKKKLKERMDDFQ LRE+IRQ FTVTGNRPDEETIDD
Sbjct: 195 GSAVDRSREQTTGAVKKKLKERMDDFQVLRESIRQEYREVVERRVFTVTGNRPDEETIDD 374
Query: 634 LIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
LIETG+SEQIFKDA+Q QGRGQ+LDTVAEIQERHDAVRDLERKLL
Sbjct: 375 LIETGRSEQIFKDAVQQQGRGQVLDTVAEIQERHDAVRDLERKLL 509
Score = 289 bits (625), Expect(4) = 1e-082
Identities = 129/162 (79%), Positives = 132/162 (81%)
Frame = -3 / -3
Query: 767 RSFLSRSLTASCRSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVK 588
RSFLSRSLTASCRSCISATVS+ WPLP C ASL ICSL P SGRLPVTV
Sbjct: 508 RSFLSRSLTASCRSCISATVSNTWPLPCC*TASLKICSLLPVSIKSSIVSSSGRLPVTVN 329
Query: 587 TLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLS 408
TLLSTTSRYSC I SL *KSSIRSFNFF TAPVVCSLDRSTA+PFPHPGFCL D+LS S
Sbjct: 328 TLLSTTSRYSCRIDSLNT*KSSIRSFNFFLTAPVVCSLDRSTADPFPHPGFCLLDKLSFS 149
Query: 407 SSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFA 282
SSST VFA AIFPTSSISFSIRCLIAFM LAFVT DSSFA
Sbjct: 148 SSSTLVFAIRAIFPTSSISFSIRCLIAFMALAFVTAFDSSFA 23
Score = 242 bits (522), Expect = 4e-063
Identities = 107/156 (68%), Positives = 117/156 (75%)
Frame = -2 / -2
Query: 750 IPYSIMSLLYFSNSV*YLASSLMLDSIFEYLLTFSGLYQVINCLFIRTITSYSKNPSFDN 571
I YSIM LLY SNSV YLAS L+L+SIFE LLT L +IN LFIR ITSYSK PSF+N
Sbjct: 491 ISYSIMPLLYLSNSVQYLASPLLLNSIFENLLTPPCLD*IINSLFIRAITSYSKYPSFNN 312
Query: 570 LSILLPDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRTLSTSRFLPIR*VISFQFINFC 391
+LLPD FSQ LKI+HPFLQFLF C S++ R L SRFLP+R*VI FQFINF
Sbjct: 311 FPVLLPD*FSQYLKIVHPFLQFLFDCSSSLFS*SIYCRPLPASRFLPVR*VIFFQFINFG 132
Query: 390 LCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFLIC 283
C SNFPHFINIFLH LLNCFHGTCFCN FL+C
Sbjct: 131 FCHTSNFPHFINIFLHSLLNCFHGTCFCNCF*FLVC 24
Score = 215 bits (465), Expect = 3e-055
Identities = 102/145 (70%), Positives = 114/145 (78%)
Frame = +2 / +1
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*R 514
SS WRKILMKWGKLL+ Q+ KLMNWK+ITY G+NLD R L DQE++LLEQ KRN*R
Sbjct: 76 SSEWRKILMKWGKLLVWQKPKLMNWKKITYLTGRNLDAGRGLQ*IDQENRLLEQSKRN*R 255
Query: 515 NGWMIFRP*EKQSGKSIERLSKEGFLL*LVIVLMKRQLMT**RPEKVSKYSKMLSNIREE 694
NGW IFR *E QSG+S +L KEG+LL*LVI LMKR LM * R VSK+SKML + R E
Sbjct: 256 NGWTIFRY*ENQSGRSTGKLLKEGYLL*LVIALMKRLLMI*SRQGGVSKFSKMLFSSRGE 435
Query: 695 ARY*TLLLKYRSDMML*GI*RGSFW 769
ARY TLLL+YRS MML* I*RGSFW
Sbjct: 436 ARYWTLLLRYRSGMML*EI*RGSFW 510
Score = 114 bits (244), Expect(2) = 4e-037
Identities = 58/85 (68%), Positives = 60/85 (70%)
Frame = -1 / -1
Query: 607 DYQLQ*KPFFRQPLDTLA*LLLSRSENHPSVPSISFSLLQ*FALLIGPRQNPFHIQVFAY 428
DYQLQ* PFF+Q T A L+LS EN PSVPSISF LLQ* LLI Q P IQV A
Sbjct: 348 DYQLQ*IPFFQQLPGTPAGLILSIPENRPSVPSISF*LLQ*SVLLIDLLQTPSRIQVSAC 169
Query: 427 SIGYLFPVHQLLSLPEEQFSPLHQY 353
I YLFPVHQL LP EQFSPLHQY
Sbjct: 168 *ISYLFPVHQLWFLPYEQFSPLHQY 94
Score = 95.5 bits (202), Expect(3) = 9e-047
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +3 / +2
Query: 432 AKTWMWKGFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQARVSRGCRKKGFYCNW*SS 611
A+TWM +G C IKR +YWSS+KEIEGTDG FS +ER N A V C KKG YCNW*S
Sbjct: 173 AETWMREGVCSRSIKRTDYWSSQKEIEGTDGRFSGIERINPAGVPGSC*KKGIYCNW*SP 352
Query: 612 ** 617
**
Sbjct: 353 ** 358
Score = 68.4 bits (143), Expect(3) = 9e-047
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +3 / +2
Query: 648 KK*ANIQRCYPTSGKRPDTRHCC*NTGAT*CCKGSREEASG 770
++*AN QRC +G+RP HCC*+TGA *CCK SREEASG
Sbjct: 389 EE*ANFQRCCSAAGERPGIGHCC*DTGAA*CCKRSREEASG 511
Score = 62.5 bits (130), Expect(3) = 9e-047
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = +3 / +2
Query: 282 CK*GIXXSYKSKFHESN*AADGERY**SGENC 377
CK GI SYKSK HESN*AA+GERY**SGENC
Sbjct: 23 CKRGIKSSYKSKCHESN*AANGERY**SGENC 118
Score = 61.1 bits (127), Expect(2) = 4e-037
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = -1 / -1
Query: 769 PEASSLDPLQHHVAPVFQQQCLVSGLFPDVG*HL*IFAH 653
PEASSLD LQHH APV QQQC + GL P HL* FAH
Sbjct: 510 PEASSLDLLQHHAAPVSQQQCPIPGLSPAAEQHL*KFAH 394
Score = 33.6 bits (67), Expect(3) = 1e-095
Identities = 11/18 (61%), Positives = 18/18 (100%)
Frame = +1 / +2
Query: 784 FMDMAVLVEAQGDMINNI 837
+++MA+LVEAQGD+IN++
Sbjct: 527 YLNMAILVEAQGDLINHL 580
Score = 31.8 bits (63), Expect(3) = 1e-095
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1 / +3
Query: 838 ETHVSNATNHIQQGVSALQNAKKLQR 915
ETHVSN +NHI +G +A + + ++
Sbjct: 582 ETHVSNGSNHIHKGGAAFKTQRTAKK 659
Score = 28.6 bits (56), Expect(4) = 1e-082
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3 / -3
Query: 887 ALTPCCMWLVAFETWVS 837
A P CMWL FET VS
Sbjct: 631 AAPPLCMWLEPFETCVS 581
Score = 25.4 bits (49), Expect(4) = 1e-082
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 834 VVDHVSLRLNKNCHV 790
VVD V L LN+ CH+
Sbjct: 577 VVDQVPLSLNQYCHI 533
Score = 22.1 bits (42), Expect(4) = 1e-082
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3 / -2
Query: 791 SMNICCNSR 765
S NICCNS+
Sbjct: 533 SSNICCNSQ 507
>gb|AV917182.1|AV917182 AV917182 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8f06 5', mRNA sequence
Length = 555
Score = 314 bits (680), Expect(3) = 5e-090
Identities = 133/153 (86%), Positives = 140/153 (91%)
Frame = +1 / +3
Query: 481 QTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQ 660
QTTGAVKKKLKERMDDFQ LRE+IRQ FTVTGNRPDEETIDDLIETG+SEQ
Sbjct: 48 QTTGAVKKKLKERMDDFQVLRESIRQEYREVVERRVFTVTGNRPDEETIDDLIETGRSEQ 227
Query: 661 IFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIE 840
IFKDA+Q QGRGQ+LDTVAEIQERHDAVRDLERKLLELQQIF+DMAVLVEAQGDMIN+IE
Sbjct: 228 IFKDAVQQQGRGQVLDTVAEIQERHDAVRDLERKLLELQQIFLDMAVLVEAQGDMINHIE 407
Query: 841 THVSNATNHIQQGVSALQNAKKLQRNSRKWMCY 939
THVSNATNHIQQGV ALQNAKKLQ+NSRKWMCY
Sbjct: 408 THVSNATNHIQQGVGALQNAKKLQKNSRKWMCY 506
Score = 269 bits (581), Expect(2) = 8e-072
Identities = 117/149 (78%), Positives = 119/149 (79%)
Frame = -3 / -3
Query: 926 FLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRS 747
FLEF CSFFAFW A TPCCMWLVAFET VSM LIMSP AST TA+S NICCNSRSFLSRS
Sbjct: 493 FLEFFCSFFAFWRAPTPCCMWLVAFETCVSMWLIMSP*ASTSTAISRNICCNSRSFLSRS 314
Query: 746 LTASCRSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTS 567
LTASCRSCISATVS+ WPLP C ASL ICSL P SGRLPVTV TLLSTTS
Sbjct: 313 LTASCRSCISATVSNTWPLPCC*TASLKICSLLPVSIKSSIVSSSGRLPVTVNTLLSTTS 134
Query: 566 RYSCLIASLKV*KSSIRSFNFFFTAPVVC 480
RYSC I SL *KSSIRSFNFF TAPVVC
Sbjct: 133 RYSCRIDSLNT*KSSIRSFNFFLTAPVVC 47
Score = 168 bits (361), Expect = 6e-041
Identities = 80/114 (70%), Positives = 90/114 (78%)
Frame = +2 / +1
Query: 479 SKLLEQ*KRN*RNGWMIFRP*EKQSGKSIERLSKEGFLL*LVIVLMKRQLMT**RPEKVS 658
++LLEQ KRN*RNGW IFR *E QSG+S +L KEG+LL*LVI LMKR LM * R VS
Sbjct: 46 NRLLEQSKRN*RNGWTIFRY*ENQSGRSTGKLLKEGYLL*LVIALMKRLLMI*SRQGGVS 225
Query: 659 KYSKMLSNIREEARY*TLLLKYRSDMML*GI*RGSFWSCNRYSWTWQFLLRRKE 820
K+SKML + R EARY TLLL+YRS MML* I*RGSFWS +RYSW WQ+ LR KE
Sbjct: 226 KFSKMLFSSRGEARYWTLLLRYRSGMML*EI*RGSFWSYSRYSWIWQYWLRLKE 387
Score = 132 bits (282), Expect(2) = 7e-050
Identities = 61/86 (70%), Positives = 67/86 (77%)
Frame = -2 / -2
Query: 750 IPYSIMSLLYFSNSV*YLASSLMLDSIFEYLLTFSGLYQVINCLFIRTITSYSKNPSFDN 571
I YSIM LLY SNSV YLAS L+L+SIFE LLT L +IN LFIR ITSYSK PSF+N
Sbjct: 317 ISYSIMPLLYLSNSVQYLASPLLLNSIFENLLTPPCLD*IINSLFIRAITSYSKYPSFNN 138
Query: 570 LSILLPDCFSQGLKIIHPFLQFLFHC 493
+LLPD FSQ LKI+HPFLQFLF C
Sbjct: 137 FPVLLPD*FSQYLKIVHPFLQFLFDC 60
Score = 121 bits (259), Expect(3) = 6e-050
Identities = 48/75 (64%), Positives = 58/75 (77%)
Frame = +3 / +2
Query: 648 KK*ANIQRCYPTSGKRPDTRHCC*NTGAT*CCKGSREEASGVATDIHGHGSSC*GARRHD 827
++*AN QRC +G+RP HCC*+TGA *CCK SREEASGV DI G+GS+ *G+RRHD
Sbjct: 215 EE*ANFQRCCSAAGERPGIGHCC*DTGAA*CCKRSREEASGVTADIPGYGSTG*GSRRHD 394
Query: 828 QQHRDPCLERHQPHT 872
Q HRD C + +QPHT
Sbjct: 395 QPHRDTCFKCYQPHT 439
Score = 86.3 bits (182), Expect(2) = 7e-050
Identities = 37/54 (68%), Positives = 42/54 (77%)
Frame = -2 / -2
Query: 942 GVAHPLPRIPLQFLRVLERAHTLLYVVGGVRDMGLDVVDHVSLRLNKNCHVHEY 781
GVAHPL R+ LQ L VLE AHTLLYVVG + +M L VVDHVSL LN+ CH+ EY
Sbjct: 509 GVAHPLSRVLLQLLCVLESAHTLLYVVGSI*NMCLYVVDHVSLSLNQYCHIQEY 348
Score = 79.9 bits (168), Expect(3) = 2e-028
Identities = 37/56 (66%), Positives = 38/56 (67%)
Frame = -1 / -1
Query: 820 LLAPQQELPCP*ISVATPEASSLDPLQHHVAPVFQQQCLVSGLFPDVG*HL*IFAH 653
LL PQ LP P IS TPEASSLD LQHH APV QQQC + GL P HL* FAH
Sbjct: 387 LLEPQPVLPYPGISAVTPEASSLDLLQHHAAPVSQQQCPIPGLSPAAEQHL*KFAH 220
Score = 73.5 bits (154), Expect(3) = 6e-050
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +3 / +2
Query: 483 NYWSSEKEIEGTDG*FSDLERSNQARVSRGCRKKGFYCNW*SS** 617
+YWSS+KEIEGTDG FS +ER N A V C KKG YCNW*S **
Sbjct: 50 DYWSSQKEIEGTDGRFSGIERINPAGVPGSC*KKGIYCNW*SP** 184
Score = 56.5 bits (117), Expect(3) = 2e-028
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = -1 / -1
Query: 607 DYQLQ*KPFFRQPLDTLA*LLLSRSENHPSVPSISFSLLQ*FALL 473
DYQLQ* PFF+Q T A L+LS EN PSVPSISF LLQ* L
Sbjct: 174 DYQLQ*IPFFQQLPGTPAGLILSIPENRPSVPSISF*LLQ*SVXL 40
Score = 41.8 bits (85), Expect(3) = 6e-050
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2 / +1
Query: 869 YSKV*ARSRTRRNCRGIRGSGCATP 943
Y+KV A SRT+R+CR R SGCATP
Sbjct: 436 YNKVWALSRTQRSCRRTRESGCATP 510
Score = 28.6 bits (56), Expect(3) = 5e-090
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 927 VDVLRHHHTAGDSRGH 974
VDVLRHH + GDS H
Sbjct: 494 VDVLRHHPSPGDSGYH 541
Score = 28.6 bits (56), Expect(3) = 5e-090
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / +1
Query: 436 KPGCGKGSAV 465
KPGCGKGSAV
Sbjct: 1 KPGCGKGSAV 30
Score = 27.6 bits (54), Expect(3) = 2e-028
Identities = 11/35 (31%), Positives = 11/35 (31%)
Frame = -1 / -1
Query: 964 LSPAV**WXXXXXXXXXXXXXXXXXXXSHLAVCGW 860
LSP *W HL VCGW
Sbjct: 531 LSPGEG*WRSTSTFSSSSAASLRSGERPHLVVCGW 427
Score = 22.6 bits (43), Expect(2) = 8e-072
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3 / -2
Query: 464 TAEPFPHPG 438
TA+PFP PG
Sbjct: 29 TADPFPXPG 3
>gb|BF259611.2|BF259611 HVSMEf0019M16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019M16f, mRNA sequence
Length = 527
Score = 316 bits (685), Expect = 1e-085
Identities = 137/155 (88%), Positives = 144/155 (92%)
Frame = +1 / +2
Query: 94 AAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNK 273
AAMNNLLTDSFELPRRDSSRD D+EMGMHQ DASDNLK FLKKVD IES+IAKL+NLL K
Sbjct: 62 AAMNNLLTDSFELPRRDSSRDGDVEMGMHQPDASDNLKGFLKKVDGIESLIAKLTNLLTK 241
Query: 274 LXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGK 453
L +ANEES VTKAS+MKAIKQRMEKDIDEVGKIA AKTKVDELE+DNLSNRQKPGCGK
Sbjct: 242 LQSANEESKAVTKASAMKAIKQRMEKDIDEVGKIARMAKTKVDELEKDNLSNRQKPGCGK 421
Query: 454 GSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQ 558
GSAVDRSREQTTGAVKKKLKERMDDFQ LRE+IRQ
Sbjct: 422 GSAVDRSREQTTGAVKKKLKERMDDFQVLRESIRQ 526
Score = 243 bits (526), Expect = 1e-063
Identities = 114/153 (74%), Positives = 116/153 (75%)
Frame = -3 / -3
Query: 557 CLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*G 378
C I SL *KSSIRSFNFF TAPVVCSLDRSTA+PFPHPGFCL D+LS SSSST VFA
Sbjct: 525 CRIDSLNT*KSSIRSFNFFLTAPVVCSLDRSTADPFPHPGFCLLDKLSFSSSSTLVFAIR 346
Query: 377 AIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDSFAIILSIASTFFKKSFKL 198
AIFPTSSISFSIRCLIAFM LAFVT DSSFA WSL RF S AI LSI STFFKK FKL
Sbjct: 345 AIFPTSSISFSIRCLIAFMALAFVTAFDSSFADWSLVKRFVSLAIRLSIPSTFFKKPFKL 166
Query: 197 XXXXXXXXXXXXXXSLEESRRGSSKESVRRLFM 99
SLEESRRGSS ESV RLFM
Sbjct: 165 SEASG*CIPISTSPSLEESRRGSSNESVSRLFM 67
Score = 226 bits (487), Expect = 3e-058
Identities = 100/153 (65%), Positives = 112/153 (73%)
Frame = -2 / -2
Query: 558 LPDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRTLSTSRFLPIR*VISFQFINFCLCLR 379
LPD FSQ LKI+HPFLQFLF C S++ R L SRFLP+R*VI FQFINF C
Sbjct: 526 LPD*FSQYLKIVHPFLQFLFDCSSSLFS*SIYCRPLPASRFLPVR*VIFFQFINFGFCHT 347
Query: 378 SNFPHFINIFLHPLLNCFHGTCFCNXXGFLICSXELIQ*I*QLCNYTLNCIDLLQEIFQV 199
SNFPHFINIFLH LLNCFHGTCFCN FL+C EL Q I QL LN I+LLQE F +
Sbjct: 346 SNFPHFINIFLHSLLNCFHGTCFCNCF*FLVCRLELSQEIRQLSY*ALNSINLLQEAF*I 167
Query: 198 V*SISLMHSHFNICVS*GVPPRELKGIREEVVH 100
+ SI LMHSHFN+ +S*G+PPR+LK I E VVH
Sbjct: 166 IRSIRLMHSHFNVPIS*GIPPRKLK*IGE*VVH 68
Score = 135 bits (289), Expect(2) = 2e-045
Identities = 66/95 (69%), Positives = 72/95 (75%)
Frame = +3 / +1
Query: 93 RRHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE* 272
RRHEQP H F+*A SAG LKR *NGNAS *CF +R LEEG N*E N A +S++*
Sbjct: 61 RRHEQPTHRFI*ASSAGFLKRWGR*NGNASA*CF**FKRLLEEG*WN*EPNS*ADESLD* 240
Query: 273 APXCK*GIXXSYKSKFHESN*AADGERY**SGENC 377
AP CK GI SYKSK HESN*AA+GERY**SGENC
Sbjct: 241 APVCKRGIKSSYKSKCHESN*AANGERY**SGENC 345
Score = 123 bits (263), Expect(2) = 2e-040
Identities = 53/75 (70%), Positives = 60/75 (80%)
Frame = +2 / +3
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*R 514
SS WRKILMKWGKLL+ Q+ KLMNWK+ITY G+NLD R L DQE++LLEQ KRN*R
Sbjct: 303 SSEWRKILMKWGKLLVWQKPKLMNWKKITYLTGRNLDAGRGLQ*IDQENRLLEQSKRN*R 482
Query: 515 NGWMIFRP*EKQSGK 559
NGW IFR *E QSG+
Sbjct: 483 NGWTIFRY*ENQSGR 527
Score = 94.1 bits (199), Expect(2) = 4e-035
Identities = 46/66 (69%), Positives = 47/66 (71%)
Frame = -1 / -1
Query: 550 LLLSRSENHPSVPSISFSLLQ*FALLIGPRQNPFHIQVFAYSIGYLFPVHQLLSLPEEQF 371
L+LS EN PSVPSISF LLQ* LLI Q P IQV A I YLFPVHQL LP EQF
Sbjct: 518 LILSIPENRPSVPSISF*LLQ*SVLLIDLLQTPSRIQVSAC*ISYLFPVHQLWFLPYEQF 339
Query: 370 SPLHQY 353
SPLHQY
Sbjct: 338 SPLHQY 321
Score = 74.8 bits (157), Expect(2) = 4e-035
Identities = 36/59 (61%), Positives = 41/59 (69%)
Frame = -1 / -1
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGAQRN 119
IP LQ GA S D +A L SQ H+PSSR+L + KHQ DAFPFQ LLR+PAE AQ N
Sbjct: 263 IPRLQTGA*SRDSSA*LLGSQFHQPSSRSLLNYQKHQADAFPFQRPHLLRNPAEEAQMN 87
Score = 68.4 bits (143), Expect(2) = 2e-045
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = +3 / +1
Query: 432 AKTWMWKGFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQA 557
A+TWM +G C IKR +YWSS+KEIEGTDG FS +ER N A
Sbjct: 400 AETWMREGVCSRSIKRTDYWSSQKEIEGTDGRFSGIERINPA 525
Score = 63.4 bits (132), Expect(2) = 2e-040
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +2 / +3
Query: 137 GGTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
GG PQE LKWECI LML *K S*RR M+LR * S +I *+SS LQ RN
Sbjct: 105 GGIPQEMGTLKWECISLMLLII*KAS*RRLMELRA**LS*RIS*LSSSLQTRN 263
>gb|CA028228.1|CA028228 HZ61G01r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61G01
5-PRIME, mRNA sequence
Length = 546
Score = 314 bits (681), Expect = 4e-085
Identities = 136/155 (87%), Positives = 143/155 (92%)
Frame = +1 / +2
Query: 94 AAMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNK 273
AAMNNLLTDSFELPRRDSSRD D+EMGMHQ DASDNLK FLKKVD IES+I KL+NLL K
Sbjct: 47 AAMNNLLTDSFELPRRDSSRDGDVEMGMHQPDASDNLKGFLKKVDGIESLIVKLTNLLTK 226
Query: 274 LXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGK 453
L +ANEES VTKAS+MKAIKQRMEKDIDEVGKIA AKTKVDELE+DNLSNRQKPGCGK
Sbjct: 227 LQSANEESKAVTKASAMKAIKQRMEKDIDEVGKIARMAKTKVDELEKDNLSNRQKPGCGK 406
Query: 454 GSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQ 558
GSAVDRSREQTTGAVKKKLKERMDDFQ LRE+IRQ
Sbjct: 407 GSAVDRSREQTTGAVKKKLKERMDDFQVLRESIRQ 511
Score = 265 bits (573), Expect = 4e-070
Identities = 124/165 (75%), Positives = 126/165 (76%)
Frame = -3 / -1
Query: 593 VKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLS 414
V TLLSTTSRYSC I SL *KSSIRSFNFF TAPVVCSLDRSTA+PFPHPGFCL D+LS
Sbjct: 546 VNTLLSTTSRYSCRIDSLNT*KSSIRSFNFFLTAPVVCSLDRSTADPFPHPGFCLLDKLS 367
Query: 413 LSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDSFAIILS 234
SSSST VFA AIFPTSSISFSIRCLIAFM LAFVT DSSFA WSL RF S I LS
Sbjct: 366 FSSSSTLVFAIRAIFPTSSISFSIRCLIAFMALAFVTAFDSSFADWSLVKRFVSLTIRLS 187
Query: 233 IASTFFKKSFKLXXXXXXXXXXXXXXSLEESRRGSSKESVRRLFM 99
I STFFKK FKL SLEESRRGSS ESV RLFM
Sbjct: 186 IPSTFFKKPFKLSEASG*CIPISTSPSLEESRRGSSNESVSRLFM 52
Score = 240 bits (518), Expect = 1e-062
Identities = 106/164 (64%), Positives = 120/164 (73%)
Frame = -2 / -3
Query: 591 KNPSFDNLSILLPDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRTLSTSRFLPIR*VIS 412
K PSF+N +LLPD FSQ LKI+HPFLQFLF C S++ R L SRFLP+R*VI
Sbjct: 544 KYPSFNNFPVLLPD*FSQYLKIVHPFLQFLFDCSSSLFS*SIYCRPLPASRFLPVR*VIF 365
Query: 411 FQFINFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFLICSXELIQ*I*QLCNYTLN 232
FQFINF C SNFPHFINIFLH LLNCFHGTCFCN FL+C EL Q I QL LN
Sbjct: 364 FQFINFGFCHTSNFPHFINIFLHSLLNCFHGTCFCNCF*FLVCRLELSQEIRQLNY*ALN 185
Query: 231 CIDLLQEIFQVV*SISLMHSHFNICVS*GVPPRELKGIREEVVH 100
I+LLQE F ++ SI LMHSHFN+ +S*G+PPR+LK I E VVH
Sbjct: 184 SINLLQEAF*IIRSIRLMHSHFNVPIS*GIPPRKLK*IGE*VVH 53
Score = 136 bits (291), Expect(2) = 3e-044
Identities = 59/86 (68%), Positives = 68/86 (79%)
Frame = +2 / +3
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*R 514
SS WRKILMKWGKLL+ Q+ KLMNWK+ITY G+NLD R L DQE++LLEQ KRN*R
Sbjct: 288 SSEWRKILMKWGKLLVWQKPKLMNWKKITYLTGRNLDAGRGLQ*IDQENRLLEQSKRN*R 467
Query: 515 NGWMIFRP*EKQSGKSIERLSKEGFL 592
NGW IFR *E QSG+S +L KEG+L
Sbjct: 468 NGWTIFRY*ENQSGRSTGKLLKEGYL 545
Score = 135 bits (289), Expect(2) = 3e-049
Identities = 66/95 (69%), Positives = 72/95 (75%)
Frame = +3 / +1
Query: 93 RRHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE* 272
RRHEQP H F+*A SAG LKR *NGNAS *CF +R LEEG N*E N A +S++*
Sbjct: 46 RRHEQPTHRFI*ASSAGFLKRWGR*NGNASA*CF**FKRLLEEG*WN*EPNS*ADESLD* 225
Query: 273 APXCK*GIXXSYKSKFHESN*AADGERY**SGENC 377
AP CK GI SYKSK HESN*AA+GERY**SGENC
Sbjct: 226 APVCKRGIKSSYKSKCHESN*AANGERY**SGENC 330
Score = 103 bits (219), Expect(2) = 7e-038
Identities = 52/78 (66%), Positives = 54/78 (69%)
Frame = -1 / -2
Query: 586 PFFRQPLDTLA*LLLSRSENHPSVPSISFSLLQ*FALLIGPRQNPFHIQVFAYSIGYLFP 407
PFF+Q T A L+LS EN PSVPSISF LLQ* LLI Q P IQV A I YLFP
Sbjct: 539 PFFQQLPGTPAGLILSIPENRPSVPSISF*LLQ*SVLLIDLLQTPSRIQVSAC*ISYLFP 360
Query: 406 VHQLLSLPEEQFSPLHQY 353
VHQL LP EQFSPLHQY
Sbjct: 359 VHQLWFLPYEQFSPLHQY 306
Score = 80.8 bits (170), Expect(2) = 3e-049
Identities = 33/54 (61%), Positives = 38/54 (70%)
Frame = +3 / +1
Query: 432 AKTWMWKGFCRGPIKRANYWSSEKEIEGTDG*FSDLERSNQARVSRGCRKKGFY 593
A+TWM +G C IKR +YWSS+KEIEGTDG FS +ER N A V C KKG Y
Sbjct: 385 AETWMREGVCSRSIKRTDYWSSQKEIEGTDGRFSGIERINPAGVPGSC*KKGIY 546
Score = 74.8 bits (157), Expect(2) = 7e-038
Identities = 36/59 (61%), Positives = 41/59 (69%)
Frame = -1 / -2
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGAQRN 119
IP LQ GA S D +A L SQ H+PSSR+L + KHQ DAFPFQ LLR+PAE AQ N
Sbjct: 248 IPRLQTGA*SRDSSA*LLGSQFHQPSSRSLLNYQKHQADAFPFQRPHLLRNPAEEAQMN 72
Score = 63.4 bits (132), Expect(2) = 3e-044
Identities = 33/53 (62%), Positives = 36/53 (67%)
Frame = +2 / +3
Query: 137 GGTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
GG PQE LKWECI LML *K S*RR M+LR * S +I *+SS LQ RN
Sbjct: 90 GGIPQEMGTLKWECISLMLLII*KAS*RRLMELRA**LS*RIS*LSSSLQTRN 248
>gb|BU981013.1|BU981013 HA22G03r HA Hordeum vulgare subsp. vulgare cDNA clone HA22G03
5-PRIME, mRNA sequence
Length = 636
Score = 256 bits (553), Expect(2) = 7e-078
Identities = 112/152 (73%), Positives = 124/152 (81%)
Frame = +1 / +3
Query: 160 DIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQ 339
D+EMGMH DAS NL+ FL KVD I+S+IAKL+ L KL +ANEES VTKAS+MKAIKQ
Sbjct: 180 DLEMGMHHPDASHNLQAFLNKVDGIDSLIAKLATLFTKLQSANEESKAVTKASAMKAIKQ 359
Query: 340 RMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKER 519
RMEKDIDEVGKIA AKTK+D+LE+DNLSNRQKPGC K SAVDRSREQTTGAVKK LK+R
Sbjct: 360 RMEKDIDEVGKIARLAKTKLDQLEKDNLSNRQKPGCDKDSAVDRSREQTTGAVKKNLKKR 539
Query: 520 MDDFQTLREAIRQXXXXXXXXXXFTVTGNRPD 615
MDDFQ LRE+IRQ FTVTGNRPD
Sbjct: 540 MDDFQVLRESIRQEYRQVVERRVFTVTGNRPD 635
Score = 216 bits (467), Expect(2) = 1e-060
Identities = 100/138 (72%), Positives = 106/138 (76%)
Frame = -3 / -3
Query: 611 GRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFC 432
GRLPVTV TLLSTT RYSC I SL *KSSIR F FFFTAPVVCSLDRSTAE HPGFC
Sbjct: 631 GRLPVTVNTLLSTTCRYSCRIDSLST*KSSIRFFKFFFTAPVVCSLDRSTAESLSHPGFC 452
Query: 431 LFDRLSLSSSSTFVFA*GAIFPTSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDS 252
L D+LS SS S+FVFA AI PTSS+SFSIRCLIAFM LAFVT DSS A WSL R S
Sbjct: 451 LLDKLSFSS*SSFVFARRAILPTSSMSFSIRCLIAFMALAFVTALDSSLADWSLVKRVAS 272
Query: 251 FAIILSIASTFFKKSFKL 198
AI LS+ ST +K+ KL
Sbjct: 271 LAIRLSMPSTLLRKACKL 218
Score = 189 bits (407), Expect = 3e-047
Identities = 83/153 (54%), Positives = 99/153 (64%)
Frame = -2 / -2
Query: 615 IRTITSYSKNPSFDNLSILLPDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRTLSTSRF 436
IRTITSY + PSF+NL +LLPD SQ LKI+HPFLQ LFH S++G L SRF
Sbjct: 635 IRTITSYGEYPSFNNLPVLLPD*LSQYLKIVHPFLQVLFHSSSSLFP*SIYGGILVASRF 456
Query: 435 LPIR*VISFQFINFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFLICSXELIQ*I* 256
LP+R*VI FQ I FC SNF HFIN+ H LLNCFHG CFCN GFL+ EL +
Sbjct: 455 LPVR*VIFFQLIEFCFRQTSNFAHFINVLFHSLLNCFHGACFCNCFGFLVGRLELGEESG 276
Query: 255 QLCNYTLNCIDLLQEIFQVV*SISLMHSHFNIC 157
QL ++ IDL++E +V I +MH H IC
Sbjct: 275 QLSYQAVDAIDLVEEGL*IVGGIGVMHPHLEIC 177
Score = 140 bits (301), Expect(2) = 1e-034
Identities = 72/149 (48%), Positives = 90/149 (60%)
Frame = +3 / +2
Query: 168 NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE*APXCK*GIXXSYKSKFHESN*AADG 347
+G+AS C Q ++GR + + + A S+ AP C+ GI SYKSK HESN*AA+G
Sbjct: 188 DGDASPRCLPQFTSLPQQGRWHRQPDS*AGHSLHQAPVCQRGIQSSYKSKRHESN*AANG 367
Query: 348 ERY**SGENCXXXXXXXXXXXXR*PIE*AKTWMWKGFCRGPIKRANYWSSEKEIEGTDG* 527
+ +**SG+NC R* I A+TWM +GF R IK +YWS EKE+E TDG
Sbjct: 368 KGH**SGQNCSSGENKTRSTGKR*LI*QAETWMRQGFRRRSIKGTDYWSCEKELEETDGR 547
Query: 528 FSDLERSNQARVSRGCRKKGFYCNW*SS* 614
FS ER N A V C KKG + NW*SS*
Sbjct: 548 FSGTERVNPAGVPASC*KKGIHRNW*SS* 634
Score = 127 bits (271), Expect(2) = 3e-030
Identities = 56/94 (59%), Positives = 70/94 (74%)
Frame = +2 / +1
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*R 514
SS W++ LMKW KLL+ ++Q +NWK+ITY G+NLD R+ P DQ ++LLE *KR *R
Sbjct: 355 SSEWKRTLMKWAKLLVWRKQNSINWKKITYLTGRNLDATRIPP*IDQGNRLLEL*KRT*R 534
Query: 515 NGWMIFRP*EKQSGKSIERLSKEGFLL*LVIVLM 616
NGW IFR *E QSG+S +L KEG+ *LVIVLM
Sbjct: 535 NGWTIFRY*ESQSGRSTGKLLKEGYSP*LVIVLM 636
Score = 55.6 bits (115), Expect(2) = 7e-078
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +1 / +3
Query: 58 SPRRPPACXSLLAAMNNLLTDSFELPRRDSSRDADIEM 171
+P C + AAMNNLLTDSFELPRRDSS D ++ M
Sbjct: 84 APNNLSVCLFIAAAMNNLLTDSFELPRRDSSTDLEMGM 197
Score = 37.7 bits (76), Expect(2) = 1e-060
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3 / -3
Query: 152 LEESRRGSSKESVRRLFM 99
+EESRRGSSKESV RLFM
Sbjct: 178 VEESRRGSSKESVSRLFM 125
Score = 26.3 bits (51), Expect(2) = 1e-034
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3 / +2
Query: 93 RRHEQPPHGFL*APSAGLLKRRR 161
RRHEQ + FL*A G R R
Sbjct: 119 RRHEQSTNRFL*ASPPGFFHRSR 187
Score = 25.4 bits (49), Expect(2) = 3e-030
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = +2 / +1
Query: 158 QILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
QI +W CI M T K S RSM * S + SS L RN
Sbjct: 178 QISRWGCITPMPPTIYKPSSTRSMASTA**LSWPLSSPSSSLPTRN 315
>gb|BQ460377.1|BQ460377 HA09O01r HA Hordeum vulgare subsp. vulgare cDNA clone HA09O01
5-PRIME, mRNA sequence
Length = 482
Score = 275 bits (596), Expect = 2e-073
Identities = 118/155 (76%), Positives = 125/155 (80%)
Frame = +1 / +3
Query: 541 REAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAE 720
R +IRQ FTVTGNRPDEETIDDLIETG+SEQIFKDA+Q QGRGQ+LDTVAE
Sbjct: 6 RGSIRQEYREVVERRVFTVTGNRPDEETIDDLIETGRSEQIFKDAVQQQGRGQVLDTVAE 185
Query: 721 IQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNA 900
IQERHDAVRDLERKLLELQQIF+DMAVLVEAQGDMIN+IETHVSNATNHIQQGV ALQNA
Sbjct: 186 IQERHDAVRDLERKLLELQQIFLDMAVLVEAQGDMINHIETHVSNATNHIQQGVGALQNA 365
Query: 901 KKLQRNSRKWMCYXXXXXXXXXXXXXXXXXQPWKK 1005
KKLQ+NSRKWMCY QPWKK
Sbjct: 366 KKLQKNSRKWMCYAIILLLVIVVIIVVAVIQPWKK 470
Score = 227 bits (491), Expect = 7e-059
Identities = 98/126 (77%), Positives = 100/126 (79%)
Frame = -3 / -2
Query: 926 FLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRS 747
FLEF CSFFAFW A TPCCMWLVAFET VSM LIMSP AST TA+S NICCNSRSFLSRS
Sbjct: 391 FLEFFCSFFAFWRAPTPCCMWLVAFETCVSMWLIMSP*ASTSTAISRNICCNSRSFLSRS 212
Query: 746 LTASCRSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTS 567
LTASCRSCISATVS+ WPLP C ASL ICSL P SGRLPVTV TLLSTTS
Sbjct: 211 LTASCRSCISATVSNTWPLPCC*TASLKICSLLPVSIKSSIVSSSGRLPVTVNTLLSTTS 32
Query: 566 RYSCLI 549
RYSC I
Sbjct: 31 RYSCRI 14
Score = 133 bits (286), Expect = 1e-030
Identities = 64/93 (68%), Positives = 72/93 (77%)
Frame = +2 / +1
Query: 542 EKQSGKSIERLSKEGFLL*LVIVLMKRQLMT**RPEKVSKYSKMLSNIREEARY*TLLLK 721
E QSG+S +L KEG+LL*LVI LMKR LM * R VSK+SKML + R EARY TLLL+
Sbjct: 7 EDQSGRSTGKLLKEGYLL*LVIALMKRLLMI*SRQGGVSKFSKMLFSSRGEARYWTLLLR 186
Query: 722 YRSDMML*GI*RGSFWSCNRYSWTWQFLLRRKE 820
YRS MML* I*RGSFWS +RYSW WQ+ LR KE
Sbjct: 187 YRSGMML*EI*RGSFWSYSRYSWIWQYWLRLKE 285
Score = 121 bits (259), Expect(4) = 1e-044
Identities = 48/75 (64%), Positives = 58/75 (77%)
Frame = +3 / +2
Query: 648 KK*ANIQRCYPTSGKRPDTRHCC*NTGAT*CCKGSREEASGVATDIHGHGSSC*GARRHD 827
++*AN QRC +G+RP HCC*+TGA *CCK SREEASGV DI G+GS+ *G+RRHD
Sbjct: 113 EE*ANFQRCCSAAGERPGIGHCC*DTGAA*CCKRSREEASGVTADIPGYGSTG*GSRRHD 292
Query: 828 QQHRDPCLERHQPHT 872
Q HRD C + +QPHT
Sbjct: 293 QPHRDTCFKCYQPHT 337
Score = 96.4 bits (204), Expect(2) = 3e-039
Identities = 46/67 (68%), Positives = 51/67 (76%)
Frame = -2 / -1
Query: 750 IPYSIMSLLYFSNSV*YLASSLMLDSIFEYLLTFSGLYQVINCLFIRTITSYSKNPSFDN 571
I YSIM LLY SNSV YLAS L+L+SIFE LLT L +IN LFIR ITSYSK PSF+N
Sbjct: 215 ISYSIMPLLYLSNSVQYLASPLLLNSIFENLLTPPCLD*IINSLFIRAITSYSKYPSFNN 36
Query: 570 LSILLPD 550
+LLPD
Sbjct: 35 FPVLLPD 15
Score = 86.3 bits (182), Expect(2) = 3e-039
Identities = 37/54 (68%), Positives = 42/54 (77%)
Frame = -2 / -1
Query: 942 GVAHPLPRIPLQFLRVLERAHTLLYVVGGVRDMGLDVVDHVSLRLNKNCHVHEY 781
GVAHPL R+ LQ L VLE AHTLLYVVG + +M L VVDHVSL LN+ CH+ EY
Sbjct: 407 GVAHPLSRVLLQLLCVLESAHTLLYVVGSI*NMCLYVVDHVSLSLNQYCHIQEY 246
Score = 79.9 bits (168), Expect(3) = 1e-022
Identities = 37/56 (66%), Positives = 38/56 (67%)
Frame = -1 / -3
Query: 820 LLAPQQELPCP*ISVATPEASSLDPLQHHVAPVFQQQCLVSGLFPDVG*HL*IFAH 653
LL PQ LP P IS TPEASSLD LQHH APV QQQC + GL P HL* FAH
Sbjct: 285 LLEPQPVLPYPGISAVTPEASSLDLLQHHAAPVSQQQCPIPGLSPAAEQHL*KFAH 118
Score = 41.8 bits (85), Expect(4) = 1e-044
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2 / +1
Query: 869 YSKV*ARSRTRRNCRGIRGSGCATP 943
Y+KV A SRT+R+CR R SGCATP
Sbjct: 334 YNKVWALSRTQRSCRRTRESGCATP 408
Score = 37.7 bits (76), Expect(4) = 1e-044
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +3 / +2
Query: 927 VDVLRHHHTAGDSRGHCRRSHPAMEE 1004
VDVLRHH + GDS H +PAMEE
Sbjct: 392 VDVLRHHPSPGDSGYHRGCGYPAMEE 469
Score = 36.8 bits (74), Expect(3) = 1e-022
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = -1 / -3
Query: 1015 ARCPSSMAG*LRRQ*PRLSPAV**WXXXXXXXXXXXXXXXXXXXSHLAVCGW 860
+R SSMAG* + +* LSP *W HL VCGW
Sbjct: 480 SRVTSSMAG*PQPR**PLSPGEG*WRSTSTFSSSSAASLRSGERPHLVVCGW 325
Score = 35.4 bits (71), Expect(4) = 1e-044
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = +3 / +2
Query: 543 RSNQARVSRGCRKKGFYCNW*SS** 617
R N A V C KKG YCNW*S **
Sbjct: 8 RINPAGVPGSC*KKGIYCNW*SP** 82
Score = 28.1 bits (55), Expect(3) = 1e-022
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1 / -3
Query: 607 DYQLQ*KPFFRQPLDTLA*LLL 542
DYQLQ* PFF+Q T A L+L
Sbjct: 72 DYQLQ*IPFFQQLPGTPAGLIL 7
>gb|BI950683.1|BI950683 HVSMEl0022G13f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0022G13f, mRNA sequence
Length = 875
Score = 247 bits (534), Expect(2) = 6e-069
Identities = 110/151 (72%), Positives = 122/151 (80%)
Frame = +1 / +2
Query: 97 AMNNLLTDSFELPRRDSSRDADIEMGMHQADASDNLKDFLKKVDAIESIIAKLSNLLNKL 276
A NNL +++LP+RDS RD D GMHQ DA DNLK F K VD I+S+I K +NLL KL
Sbjct: 101 AKNNLHPHTYKLPQRDSLRDGDEGGGMHQPDAPDNLKGFSKNVDGIDSLITKQTNLLTKL 280
Query: 277 XTANEESXXVTKASSMKAIKQRMEKDIDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKG 456
+ANEES VT AS+MKAI+QRMEKDIDEVGKIA AKTKVDELE+DNLSNR KPGCGKG
Sbjct: 281 QSANEESKAVTNASAMKAIQQRMEKDIDEVGKIARMAKTKVDELEKDNLSNRHKPGCGKG 460
Query: 457 SAVDRSREQTTGAVKKKLKERMDDFQTLREA 549
SAV RS EQTTGAVKKKLKERMDD Q LRE+
Sbjct: 461 SAVYRSTEQTTGAVKKKLKERMDDSQVLRES 553
Score = 193 bits (417), Expect(2) = 9e-056
Identities = 87/116 (75%), Positives = 92/116 (79%)
Frame = -3 / -3
Query: 545 SLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSLSSSSTFVFA*GAIFP 366
SL *+SSIRSFNFF TAPVVCS+DR TA+PFPHPG CL D+LS SSSST VFA AIFP
Sbjct: 549 SLNT*ESSIRSFNFFLTAPVVCSVDRYTADPFPHPGLCLLDKLSFSSSSTLVFAIRAIFP 370
Query: 365 TSSISFSIRCLIAFMELAFVTXXDSSFAVWSLFNRFDSFAIILSIASTFFKKSFKL 198
TSSISFSIRC IAFM LAFVT DSSFA WSL RF I LSI STFF+K FKL
Sbjct: 369 TSSISFSIRC*IAFMALAFVTAFDSSFADWSLVKRFVCLVIRLSIPSTFFEKPFKL 202
Score = 175 bits (376), Expect(2) = 1e-043
Identities = 81/153 (52%), Positives = 99/153 (64%)
Frame = -2 / -2
Query: 585 PSFDNLSILLPDCFSQGLKIIHPFLQFLFHCXXXXXXXSVHGRTLSTSRFLPIR*VISFQ 406
P F L FSQ L+I+HPFLQFLF C S++ R L SRF+P+R*VI FQ
Sbjct: 589 PFFQQLPGTRAG*FSQYLRIVHPFLQFLFDCSSSLFC*SIYCRPLPASRFMPVR*VIFFQ 410
Query: 405 FINFCLCLRSNFPHFINIFLHPLLNCFHGTCFCNXXGFLICSXELIQ*I*QLCNYTLNCI 226
FI F C SNFPHFINIFLH LLNCFHGTC CN FL+C EL Q I L + +N I
Sbjct: 409 FIYFGFCHTSNFPHFINIFLHSLLNCFHGTCVCNCF*FLVCRLELSQEIRLLSD*AVNSI 230
Query: 225 DLLQEIFQVV*SISLMHSHFNICVS*GVPPREL 127
++ +E F ++ SI LMHS + +S*G+P R+L
Sbjct: 229 NVFREAF*IIRSIRLMHSPPLVPIS*GIPLRKL 131
Score = 148 bits (318), Expect(2) = 6e-039
Identities = 79/150 (52%), Positives = 92/150 (61%)
Frame = +3 / +1
Query: 96 RHEQPPHGFL*APSAGLLKRRRY*NGNASG*CFRQLERFLEEGRCN*EYNCKAVKSIE*A 275
R EQP ++*A SAG L R GNAS *C +R LE+ N*+ N A +S++*A
Sbjct: 100 RQEQPTPPYI*ASSAGFLTRWGRGGGNASA*CS**FKRLLEKR*WN*QPNH*ADESLD*A 279
Query: 276 PXCK*GIXXSYKSKFHESN*AADGERY**SGENCXXXXXXXXXXXXR*PIE*AKTWMWKG 455
P CK GI SYK K HESN A+GERY**SGENC R* I A TWM +G
Sbjct: 280 PVCKRGIKSSYKRKCHESNSTANGERY**SGENCSYGKNQSR*TGKR*LI*QA*TWMREG 459
Query: 456 FCRGPIKRANYWSSEKEIEGTDG*FSDLER 545
C I R +YWSS+KEIEGTDG FS +ER
Sbjct: 460 VCSISINRTDYWSSQKEIEGTDGRFSGIER 549
Score = 107 bits (228), Expect(2) = 4e-028
Identities = 46/75 (61%), Positives = 55/75 (73%)
Frame = +2 / +3
Query: 335 SSGWRKILMKWGKLLLRQRQKLMNWKEITYRIGKNLDVERVLPWTDQESKLLEQ*KRN*R 514
+S WRKILMKWGKLL+ Q+ K MNWK+ITY G NLD R L + DQ+++LLEQ KRN*R
Sbjct: 339 NSEWRKILMKWGKLLVWQKPK*MNWKKITYLTGINLDAGRGLQYIDQQNRLLEQSKRN*R 518
Query: 515 NGWMIFRP*EKQSGK 559
NGW I R *E +
Sbjct: 519 NGWTILRY*ENHPAR 563
Score = 92.3 bits (195), Expect(3) = 1e-033
Identities = 44/66 (66%), Positives = 47/66 (71%)
Frame = -1 / -1
Query: 550 LLLSRSENHPSVPSISFSLLQ*FALLIGPRQNPFHIQVFAYSIGYLFPVHQLLSLPEEQF 371
++LS EN PSVPSISF LLQ* LLI Q P IQV+A I YLFPVH L LP EQF
Sbjct: 554 MILSIPENRPSVPSISF*LLQ*SVLLIDILQTPSRIQVYAC*ISYLFPVHLLWFLPYEQF 375
Query: 370 SPLHQY 353
SPLHQY
Sbjct: 374 SPLHQY 357
Score = 49.6 bits (102), Expect(3) = 1e-033
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = -1 / -1
Query: 295 IPHLQXGAYSIDLTALQLYSQLHRPSSRNLSSCLKHQPDAFPFQYLRLLRSPAEGA 128
IP LQ GA S D +A L Q H+ SR+L + +HQ DAFP L+R+PAE A
Sbjct: 299 IPRLQTGA*SRDSSA**LGCQFHQRFSRSLLNYQEHQADAFPPPRPHLVRNPAEEA 132
Score = 44.1 bits (90), Expect(2) = 9e-056
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -3 / -1
Query: 611 GRLPVTVKTLLSTTSRYSC 555
GRLPVTV TLLSTTSRYSC
Sbjct: 614 GRLPVTVDTLLSTTSRYSC 558
Score = 40.0 bits (81), Expect(3) = 1e-033
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -2 / -3
Query: 633 VINCLFIRTITSYSKNPSFDNLSILLPD 550
+I LFIR ITS S+ PSF+N +L+PD
Sbjct: 636 IIYSLFIRAITSDSRYPSFNNFPVLVPD 553
Score = 38.2 bits (77), Expect(2) = 4e-028
Identities = 24/52 (46%), Positives = 28/52 (53%)
Frame = +2 / +3
Query: 140 GTPQETQILKWECIRLMLQTT*KIS*RRSMQLRV*LQSCQIY*ISSXLQMRN 295
G P E ECI LML *K S + M+L * S +I *+SS LQ RN
Sbjct: 144 GIPYEMGTRGGECISLMLLII*KASRKTLMELTA*SLSRRIS*LSSSLQTRN 299
Score = 34.5 bits (69), Expect(2) = 6e-069
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2 / +2
Query: 545 KQSGKSIERLSKEGFLL*LVIVLMKR 622
+ SG S +L KEG+LL LVI LMKR
Sbjct: 548 ESSGTSTGKLLKEGYLLSLVIALMKR 625
Score = 33.1 bits (66), Expect(2) = 6e-039
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3 / +3
Query: 546 SNQARVSRGCRKKGFYCNW*SS** 617
++ ARV C KKG YC+W*S **
Sbjct: 549 NHPARVPGSC*KKGIYCHW*SP** 620
Score = 22.1 bits (42), Expect(2) = 1e-043
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / -2
Query: 607 DYQLQ*KPFFRQ 572
DYQ Q* PFF+Q
Sbjct: 610 DYQ*Q*IPFFQQ 575
>gb|CD662917.1|CD662917 UCRHV18_03ce02_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_03ce02, mRNA sequence
Length = 838
Score = 251 bits (543), Expect = 5e-066
Identities = 104/178 (58%), Positives = 135/178 (75%)
Frame = +1 / -3
Query: 403 ELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXX 582
+L ++NL+NR KPG GKGS VDRSR T + +L++R+ +FQTLREAI+
Sbjct: 836 QLNKENLANRGKPGFGKGSGVDRSRTSMTITLTTRLRDRISEFQTLREAIQMEYREVVER 657
Query: 583 XXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERK 762
FTVTG R DEETID LIETG SEQIF+ AIQ QGRG++LDT+ EIQERHD V+++E K
Sbjct: 656 RVFTVTGERADEETIDKLIETGDSEQIFERAIQEQGRGRVLDTLQEIQERHDTVKEIETK 477
Query: 763 LLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
LLELQQIF+D++VLVE QG++++NIE V+ A +H+Q G + LQ A+ LQ+NSRKW C
Sbjct: 476 LLELQQIFLDLSVLVETQGEILDNIEEQVTGAVHHVQTGTNLLQKARVLQKNSRKWTC 303
Score = 160 bits (343), Expect = 2e-038
Identities = 87/172 (50%), Positives = 94/172 (54%)
Frame = -3 / +1
Query: 926 FLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRS 747
F EF C AF P A T SML +SPC STRT S ICC+SRSF+S S
Sbjct: 313 FREFFCRTLAF*RRFVPV*T*CTAPVTCSSMLSRISPCVSTRTDKSRKICCSSRSFVSIS 492
Query: 746 LTASCRSCISATVSSIWPLP*CWIASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTS 567
T SCRS IS +VSS P P IA ICSL P S R PVTVKT STTS
Sbjct: 493 FTVSCRSWISWSVSSTLPRPCS*IALSKICSLSPVSISLSIVSSSARSPVTVKTRRSTTS 672
Query: 566 RYSCLIASLKV*KSSIRSFNFFFTAPVVCSLDRSTAEPFPHPGFCLFDRLSL 411
YS IASL V* S +RS N V+ DRST +P P PGF LF R SL
Sbjct: 673 LYSIWIASLSV*NSDMRSLNLVVNVIVIEVRDRSTPDPLPKPGFPLFARFSL 828
>gb|AY246906.1| Hordeum vulgare subsp. vulgare syntaxin (Ror2) gene, complete cds
Length = 2346
Score = 133 bits (285), Expect(2) = 4e-060
Identities = 58/168 (34%), Positives = 94/168 (55%)
Frame = +1 / +1
Query: 184 ADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDE 363
A A +L F + V++I+ + +L + L NE + AS+++A++ RM+ D+
Sbjct: 1156 AAAGASLDRFFEDVESIKDDLRELERIQRSLHDGNESGKSLHDASAVRALRSRMDADVAA 1335
Query: 364 VGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLR 543
K A K +++ L+R N +NR GCG GS+ DR+R ++KKL++ M+ F +LR
Sbjct: 1336 AIKKAKVVKLRLESLDRANAANRSVAGCGPGSSTDRTRTSVVAGLRKKLRDAMESFSSLR 1515
Query: 544 EAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQ 687
I FTVTG++PDE T+D L ETG+ E++ + AI Q
Sbjct: 1516 SRITSEYRETVARRYFTVTGSQPDEATLDTLAETGEGERLLQRAIAEQ 1659
Score = 119 bits (254), Expect(2) = 4e-060
Identities = 50/84 (59%), Positives = 64/84 (76%)
Frame = +1 / +1
Query: 679 QHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNA 858
+ QGRG++L VAEIQERH AV DLER LLELQQ+F DMAVLV AQG+ +++IE HV A
Sbjct: 1654 EQQGRGEVLGVVAEIQERHGAVADLERSLLELQQVFNDMAVLVAAQGEQLDDIEGHVGRA 1833
Query: 859 TNHIQQGVSALQNAKKLQRNSRKW 930
+ + +G LQ A+K Q++SRKW
Sbjct: 1834 RSFVDRGREQLQVARKHQKSSRKW 1905
>gb|AY246907.1| Hordeum vulgare subsp. vulgare syntaxin (Ror2) mRNA, complete cds
Length = 1293
Score = 133 bits (285), Expect(2) = 4e-060
Identities = 58/168 (34%), Positives = 94/168 (55%)
Frame = +1 / +2
Query: 184 ADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDE 363
A A +L F + V++I+ + +L + L NE + AS+++A++ RM+ D+
Sbjct: 275 AAAGASLDRFFEDVESIKDDLRELERIQRSLHDGNESGKSLHDASAVRALRSRMDADVAA 454
Query: 364 VGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLR 543
K A K +++ L+R N +NR GCG GS+ DR+R ++KKL++ M+ F +LR
Sbjct: 455 AIKKAKVVKLRLESLDRANAANRSVAGCGPGSSTDRTRTSVVAGLRKKLRDAMESFSSLR 634
Query: 544 EAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQ 687
I FTVTG++PDE T+D L ETG+ E++ + AI Q
Sbjct: 635 SRITSEYRETVARRYFTVTGSQPDEATLDTLAETGEGERLLQRAIAEQ 778
Score = 119 bits (254), Expect(2) = 4e-060
Identities = 50/84 (59%), Positives = 64/84 (76%)
Frame = +1 / +2
Query: 679 QHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNA 858
+ QGRG++L VAEIQERH AV DLER LLELQQ+F DMAVLV AQG+ +++IE HV A
Sbjct: 773 EQQGRGEVLGVVAEIQERHGAVADLERSLLELQQVFNDMAVLVAAQGEQLDDIEGHVGRA 952
Query: 859 TNHIQQGVSALQNAKKLQRNSRKW 930
+ + +G LQ A+K Q++SRKW
Sbjct: 953 RSFVDRGREQLQVARKHQKSSRKW 1024
>gb|AY247217.1| Hordeum vulgare subsp. vulgare syntaxin-like protein 4 gene,
partial cds
Length = 1352
Score = 131 bits (280), Expect(3) = 5e-059
Identities = 50/84 (59%), Positives = 69/84 (82%)
Frame = +1 / +2
Query: 685 QGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATN 864
QGRG+++ TV+EIQERHDAV+D+ER LLEL Q+F+DMA LVEAQG +NNIETHV+ A++
Sbjct: 656 QGRGEVMATVSEIQERHDAVKDIERSLLELHQVFLDMAALVEAQGHQLNNIETHVARASS 835
Query: 865 HIQQGVSALQNAKKLQRNSRKWMC 936
+ +G L++A+ Q++SRKW C
Sbjct: 836 FVVRGTVELESARVYQKSSRKWAC 907
Score = 99.1 bits (210), Expect(3) = 5e-059
Identities = 42/120 (35%), Positives = 68/120 (56%)
Frame = +1 / +3
Query: 175 MHQADASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKD 354
M NL F + V+ ++ I L + +L + NEES A ++K+++ RM D
Sbjct: 66 MEAGGEGTNLDKFFEDVEGVKEDIRGLEAIYRRLQSVNEESKTAHDARAVKSLRARMGDD 245
Query: 355 IDEVGKIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQ 534
+++V + A K K++ L+R N ++R+ PGCG GS+ DR+R + KLK+ MDDFQ
Sbjct: 246 VEQVLRRAKVVKAKLEALDRANAASRKLPGCGAGSSTDRTRSSVVSGLGNKLKDLMDDFQ 425
Score = 37.3 bits (75), Expect(3) = 5e-059
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1 / +2
Query: 532 QTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGKSEQIFKDAIQ 681
Q LR + +TVTG +E TI+ LI +G+SE + AIQ
Sbjct: 500 QGLRTRMAAEYKETVARRYYTVTGETAEESTIEALISSGESETFLQKAIQ 649
>gb|AV919917.1|AV919917 AV919917 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8f06 3', mRNA sequence
Length = 463
Score = 227 bits (491), Expect = 7e-059
Identities = 97/125 (77%), Positives = 103/125 (82%)
Frame = +1 / -2
Query: 631 DLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVE 810
DL ETG+SEQIFKDA+Q QGRGQ+LDTV EIQERHDAVRDLERKLLELQQIF+DMAVLVE
Sbjct: 417 DLXETGRSEQIFKDAVQQQGRGQVLDTVXEIQERHDAVRDLERKLLELQQIFLDMAVLVE 238
Query: 811 AQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMCYXXXXXXXXXXXXXXXXX 990
AQGDMIN+IETHVSNATNHIQQGV ALQNAKKLQ+NSRK MCY
Sbjct: 237 AQGDMINHIETHVSNATNHIQQGVGALQNAKKLQKNSRKXMCYAIILLLVIVVIIVVAVI 58
Query: 991 QPWKK 1005
QPWKK
Sbjct: 57 QPWKK 43
Score = 185 bits (399), Expect = 4e-046
Identities = 77/94 (81%), Positives = 79/94 (84%)
Frame = -3 / +2
Query: 926 FLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRS 747
FLEF CSFFAFW A TPCCMWLVAFET VSM LIMSP AST TA+S NICCNSRSFLSRS
Sbjct: 122 FLEFFCSFFAFWRAPTPCCMWLVAFETCVSMWLIMSP*ASTSTAISRNICCNSRSFLSRS 301
Query: 746 LTASCRSCISATVSSIWPLP*CWIASLNICSLFP 645
LTASCRSCIS TVS+ WPLP C ASL ICSL P
Sbjct: 302 LTASCRSCISXTVSNTWPLPCC*TASLKICSLLP 403
Score = 116 bits (248), Expect(3) = 4e-035
Identities = 47/75 (62%), Positives = 57/75 (76%)
Frame = +3 / -1
Query: 648 KK*ANIQRCYPTSGKRPDTRHCC*NTGAT*CCKGSREEASGVATDIHGHGSSC*GARRHD 827
++*AN QRC +G+RP HC *+TGA *CCK SREEASGV DI G+GS+ *G+RRHD
Sbjct: 400 EE*ANFQRCCSAAGERPGIGHCX*DTGAA*CCKRSREEASGVTADIPGYGSTG*GSRRHD 221
Query: 828 QQHRDPCLERHQPHT 872
Q HRD C + +QPHT
Sbjct: 220 QPHRDTCFKCYQPHT 176
Score = 82.2 bits (173), Expect(2) = 1e-024
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = -2 / +1
Query: 942 GVAHPLPRIPLQFLRVLERAHTLLYVVGGVRDMGLDVVDHVSLRLNKNCHVHEY 781
GVAH L R+ LQ L VLE AHTLLYVVG + +M L VVDHVSL LN+ CH+ EY
Sbjct: 106 GVAHXLSRVLLQLLCVLESAHTLLYVVGSI*NMCLYVVDHVSLSLNQYCHIQEY 267
Score = 51.5 bits (106), Expect(2) = 1e-024
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = -2 / +1
Query: 750 IPYSIMSLLYFSNSV*YLASSLMLDSIFEYLLT 652
I YSIM LLY NSV YLAS L+L+SIFE LLT
Sbjct: 298 ISYSIMPLLYLXNSVQYLASPLLLNSIFENLLT 396
Score = 36.8 bits (74), Expect(3) = 4e-035
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2 / -3
Query: 869 YSKV*ARSRTRRNCRGIRGSGCATP 943
Y+KV A SRT+R+CR R CATP
Sbjct: 179 YNKVWALSRTQRSCRRTREXXCATP 105
Score = 33.6 bits (67), Expect(3) = 4e-035
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3 / -1
Query: 930 DVLRHHHTAGDSRGHCRRSHPAMEE 1004
+VLRHH + GDS H +PAMEE
Sbjct: 118 NVLRHHPSPGDSGYHRGCGYPAMEE 44
>gb|BG416184.2|BG416184 HVSMEk0010D08f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0010D08f, mRNA sequence
Length = 625
Score = 203 bits (437), Expect = 2e-051
Identities = 87/120 (72%), Positives = 94/120 (78%)
Frame = +1 / +3
Query: 646 GKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDM 825
G+SEQIFKDA+Q QGRG +LDTVAEIQERHDAVRDLERKLLELQQIF+DMAVLVEA+ DM
Sbjct: 36 GRSEQIFKDAVQQQGRGHVLDTVAEIQERHDAVRDLERKLLELQQIFLDMAVLVEAR*DM 215
Query: 826 INNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMCYXXXXXXXXXXXXXXXXXQPWKK 1005
IN+IETHVSNATNHIQQGV AL NA KL +NS KWMCY PWKK
Sbjct: 216 INHIETHVSNATNHIQQGVGALHNA*KLGKNSGKWMCYTIILLLVIVVIIMGAVIHPWKK 395
Score = 172 bits (371), Expect = 3e-042
Identities = 74/94 (78%), Positives = 77/94 (81%)
Frame = -3 / -1
Query: 926 FLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRS 747
F EFL SF+A W A TPCCMWLVAFET VSM LIMS AST TA+S NICCNSRSFLSRS
Sbjct: 316 FPEFLPSFYALWRAPTPCCMWLVAFETCVSMWLIMSHRASTSTAISRNICCNSRSFLSRS 137
Query: 746 LTASCRSCISATVSSIWPLP*CWIASLNICSLFP 645
LTASCRSCISATVS+ WPLP C ASL ICSL P
Sbjct: 136 LTASCRSCISATVSNTWPLPCC*TASLKICSLLP 35
Score = 115 bits (246), Expect(3) = 2e-033
Identities = 46/75 (61%), Positives = 56/75 (74%)
Frame = +3 / +2
Query: 648 KK*ANIQRCYPTSGKRPDTRHCC*NTGAT*CCKGSREEASGVATDIHGHGSSC*GARRHD 827
++*AN QRC +G+RP HCC*+TGA *CCK SREEASGV DI G+GS+ * + RHD
Sbjct: 38 EE*ANFQRCCSAAGERPRIGHCC*DTGAA*CCKRSREEASGVTADIPGYGSTG*SSMRHD 217
Query: 828 QQHRDPCLERHQPHT 872
Q HRD C + +QPHT
Sbjct: 218 QPHRDTCFKCYQPHT 262
Score = 78.0 bits (164), Expect(2) = 2e-023
Identities = 33/54 (61%), Positives = 39/54 (72%)
Frame = -2 / -3
Query: 942 GVAHPLPRIPLQFLRVLERAHTLLYVVGGVRDMGLDVVDHVSLRLNKNCHVHEY 781
GVAHPL R+ Q L V+E AHTLLYVVG + +M L VVDHVS N+ CH+ EY
Sbjct: 332 GVAHPLSRVLAQLLCVVESAHTLLYVVGSI*NMCLYVVDHVSSSFNQYCHIQEY 171
Score = 51.9 bits (107), Expect(2) = 2e-023
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = -2 / -3
Query: 750 IPYSIMSLLYFSNSV*YLASSLMLDSIFEYLLT 652
I YSIM LLY SNSV Y+AS L+L+SIFE LLT
Sbjct: 140 ISYSIMPLLYLSNSVQYVASPLLLNSIFENLLT 42
Score = 34.5 bits (69), Expect(3) = 2e-033
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3 / +2
Query: 927 VDVLRHHHTAGDSRGHCRRSHPAMEE 1004
VDVL HH + GDS H +P+MEE
Sbjct: 317 VDVLHHHPSTGDSGYHHGCGYPSMEE 394
Score = 30.9 bits (61), Expect(3) = 2e-033
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 869 YSKV*ARSRTRRNCRGIRGSGCATP 943
Y+KV A S T R+ R SGCATP
Sbjct: 259 YNKVWALSTTHRSWARTRESGCATP 333
>gb|BQ759323.1|BQ759323 EBpi01_SQ004_N01_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ004_N01 5', mRNA sequence
Length = 531
Score = 173 bits (372), Expect(2) = 4e-044
Identities = 73/94 (77%), Positives = 76/94 (80%)
Frame = +1 / +1
Query: 724 QERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAK 903
QERHDAVRDLERKLLELQQIF+DMAVLVEAQGDMIN+IETHVSNATNHIQQGV ALQNAK
Sbjct: 13 QERHDAVRDLERKLLELQQIFLDMAVLVEAQGDMINHIETHVSNATNHIQQGVGALQNAK 192
Query: 904 KLQRNSRKWMCYXXXXXXXXXXXXXXXXXQPWKK 1005
KLQ+NSRKWMCY QPWKK
Sbjct: 193 KLQKNSRKWMCYAIILLLVIVVIIVVAVIQPWKK 294
Score = 144 bits (309), Expect = 9e-034
Identities = 59/68 (86%), Positives = 60/68 (88%)
Frame = -3 / -2
Query: 926 FLEFLCSFFAFWSALTPCCMWLVAFETWVSMLLIMSPCASTRTAMSMNICCNSRSFLSRS 747
FLEF CSFFAFW A TPCCMWLVAFET VSM LIMSP AST TA+S NICCNSRSFLSRS
Sbjct: 215 FLEFFCSFFAFWRAPTPCCMWLVAFETCVSMWLIMSP*ASTSTAISRNICCNSRSFLSRS 36
Query: 746 LTASCRSC 723
LTASCRSC
Sbjct: 35 LTASCRSC 12
Score = 85.8 bits (181), Expect(3) = 9e-029
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = +3 / +3
Query: 726 GAT*CCKGSREEASGVATDIHGHGSSC*GARRHDQQHRDPCLERHQPHT 872
GA *CCK SREEASGV DI G+GS+ *G+RRHDQ HRD C + +QPHT
Sbjct: 15 GAA*CCKRSREEASGVTADIPGYGSTG*GSRRHDQPHRDTCFKCYQPHT 161
Score = 41.8 bits (85), Expect(3) = 9e-029
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2 / +2
Query: 869 YSKV*ARSRTRRNCRGIRGSGCATP 943
Y+KV A SRT+R+CR R SGCATP
Sbjct: 158 YNKVWALSRTQRSCRRTRESGCATP 232
Score = 37.7 bits (76), Expect(3) = 9e-029
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +3 / +3
Query: 927 VDVLRHHHTAGDSRGHCRRSHPAMEE 1004
VDVLRHH + GDS H +PAMEE
Sbjct: 216 VDVLRHHPSPGDSGYHRGCGYPAMEE 293
Score = 25.8 bits (50), Expect(2) = 4e-044
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 1027 FFSCLCNMCA 1056
FF CLCN+C+
Sbjct: 347 FFLCLCNLCS 376
>gb|BI952271.1|BI952271 HVSMEm0005J13f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0005J13f, mRNA sequence
Length = 1290
Score = 141 bits (302), Expect(3) = 6e-044
Identities = 62/120 (51%), Positives = 85/120 (70%)
Frame = +1 / +1
Query: 190 ASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVG 369
A L F ++V IE ++ L+ LL L +NEES VTKAS+MK IK+RMEKD++EV
Sbjct: 319 AQPGLDGFFEQVREIEKLLETLTKLLKDLQNSNEESKVVTKASAMKDIKRRMEKDVNEVT 498
Query: 370 KIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREA 549
K+A AK+K+ +L ++NL+NR KPG GKGS VDRSR T + +L++R+ +FQTLREA
Sbjct: 499 KVARLAKSKLQQLNKENLANRGKPGFGKGSGVDRSRTSMTITLTTRLRDRISEFQTLREA 678
Score = 51.9 bits (107), Expect(3) = 6e-044
Identities = 30/76 (39%), Positives = 36/76 (47%)
Frame = +1 / +3
Query: 589 FTVTGNRPDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLL 768
F V R E TID LIETG SE IF+ Q +GRG+ L E ++ LL
Sbjct: 717 FNVPAERACEYTIDKLIETGDSEPIFEKPSQDKGRGRCLTHSKESSSGMPRWKEYNTTLL 896
Query: 769 ELQQIFMDMAVLVEAQ 816
L I M+ LV Q
Sbjct: 897 GLHTIISHMSGLVRTQ 944
Score = 23.5 bits (45), Expect(3) = 6e-044
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 94 AAMNNLLTDSFELPRRD 144
A M NLL++SFEL + +
Sbjct: 211 ARMRNLLSNSFELNKEE 261
>gb|AY247215.1| Hordeum vulgare subsp. vulgare syntaxin-like protein 2 gene,
partial cds
Length = 931
Score = 172 bits (370), Expect = 4e-042
Identities = 69/169 (40%), Positives = 109/169 (64%)
Frame = +1 / +1
Query: 430 RQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNR 609
R GC +G+ +DR+R T ++KKLK+ M DFQ LR+ + +T+TG
Sbjct: 373 RLSAGCREGTTLDRTRTSVTAGLRKKLKDIMLDFQALRQRMMSEYKDTVERRYYTLTGEV 552
Query: 610 PDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFM 789
P++E I+ +I G+ E+I A+ G+G +L + EIQ+RHDA R++ER LLEL Q+F+
Sbjct: 553 PEDEVIERIISEGRGEEIMSAAVAEHGKGAVLAALNEIQDRHDAAREVERSLLELHQVFL 732
Query: 790 DMAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMC 936
DMAV+V++QG+ +++IE V+NA +++ G L A++ QR SRK +C
Sbjct: 733 DMAVVVQSQGEKLDDIENQVTNARDYVHSGNKELGKARQHQRGSRKCLC 879
>gb|CB880180.1|CB880180 HM05L22w HM Hordeum vulgare subsp. vulgare cDNA clone HM05L22
3-PRIME, mRNA sequence
Length = 600
Score = 119 bits (254), Expect(2) = 3e-032
Identities = 50/84 (59%), Positives = 64/84 (76%)
Frame = +1 / -1
Query: 679 QHQGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNA 858
+ QGRG++L VAEIQERH AV DLER LLELQQ+F DMAVLV AQG+ +++IE HV A
Sbjct: 516 EQQGRGEVLGVVAEIQERHGAVADLERSLLELQQVFNDMAVLVAAQGEQLDDIEGHVGRA 337
Query: 859 TNHIQQGVSALQNAKKLQRNSRKW 930
+ + +G LQ A+K Q++SRKW
Sbjct: 336 RSFVDRGREQLQVARKHQKSSRKW 265
Score = 40.0 bits (81), Expect(2) = 3e-032
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1 / -1
Query: 598 TGNRPDEETIDDLIETGKSEQIFKDAIQHQ 687
TG++PDE T+D L ETG+ E++ + AI Q
Sbjct: 600 TGSQPDEATLDTLAETGEGERLLQRAIAEQ 511
>gb|BU978750.1|BU978750 HA14C16r HA Hordeum vulgare subsp. vulgare cDNA clone HA14C16
5-PRIME, mRNA sequence
Length = 639
Score = 124 bits (265), Expect(2) = 7e-029
Identities = 55/110 (50%), Positives = 76/110 (69%)
Frame = +1 / +2
Query: 190 ASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVG 369
A L F ++V IE ++ L+ LL L +NEES VTKAS+MK IK+RMEKD++EV
Sbjct: 308 AQPGLDGFFEQVREIEKLLETLTKLLKDLQNSNEESKVVTKASAMKDIKRRMEKDVNEVT 487
Query: 370 KIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKER 519
K+A AK+K+ +L ++NL+NR KPG GKGS VDRSR T + +L++R
Sbjct: 488 KVARLAKSKLQQLNKENLANRGKPGFGKGSGVDRSRTSMTITLTTRLRDR 637
Score = 23.5 bits (45), Expect(2) = 7e-029
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 94 AAMNNLLTDSFELPRRD 144
A M NLL++SFEL + +
Sbjct: 200 ARMRNLLSNSFELNKEE 250
>gb|BU978987.1|BU978987 HA14N10r HA Hordeum vulgare subsp. vulgare cDNA clone HA14N10
5-PRIME, mRNA sequence
Length = 639
Score = 124 bits (265), Expect(2) = 7e-029
Identities = 55/110 (50%), Positives = 76/110 (69%)
Frame = +1 / +2
Query: 190 ASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVG 369
A L F ++V IE ++ L+ LL L +NEES VTKAS+MK IK+RMEKD++EV
Sbjct: 308 AQPGLDGFFEQVREIEKLLETLTKLLKDLQNSNEESKVVTKASAMKDIKRRMEKDVNEVT 487
Query: 370 KIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKER 519
K+A AK+K+ +L ++NL+NR KPG GKGS VDRSR T + +L++R
Sbjct: 488 KVARLAKSKLQQLNKENLANRGKPGFGKGSGVDRSRTSMTITLTTRLRDR 637
Score = 23.5 bits (45), Expect(2) = 7e-029
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 94 AAMNNLLTDSFELPRRD 144
A M NLL++SFEL + +
Sbjct: 200 ARMRNLLSNSFELNKEE 250
>gb|BQ657062.1|BQ657062 HA09O01u HA Hordeum vulgare subsp. vulgare cDNA clone HA09O01
3-PRIME, mRNA sequence
Length = 433
Score = 122 bits (260), Expect(2) = 7e-029
Identities = 51/71 (71%), Positives = 53/71 (74%)
Frame = +1 / -1
Query: 793 MAVLVEAQGDMINNIETHVSNATNHIQQGVSALQNAKKLQRNSRKWMCYXXXXXXXXXXX 972
MAVLVEAQGDMIN+IETHVSNATNHIQQGV ALQNAKKLQ+NSRKWMCY
Sbjct: 433 MAVLVEAQGDMINHIETHVSNATNHIQQGVGALQNAKKLQKNSRKWMCYAIILLLVIVVI 254
Query: 973 XXXXXXQPWKK 1005
QPWKK
Sbjct: 253 IVVAVIQPWKK 221
Score = 25.8 bits (50), Expect(2) = 7e-029
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 1027 FFSCLCNMCA 1056
FF CLCN+C+
Sbjct: 168 FFLCLCNLCS 139
>gb|BQ761625.1|BQ761625 EBem10_SQ001_G12_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ001_G12 5', mRNA sequence
Length = 204
Score = 126 bits (270), Expect = 2e-028
Identities = 55/68 (80%), Positives = 57/68 (83%)
Frame = +1 / +1
Query: 472 SREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNRPDEETIDDLIETGK 651
SREQTTGAVKKKLKERMDDFQ LRE+IRQ FTVTGNRPDEETIDDLIETG+
Sbjct: 1 SREQTTGAVKKKLKERMDDFQVLRESIRQEYREVVERRVFTVTGNRPDEETIDDLIETGR 180
Query: 652 SEQIFKDA 675
SEQIFKDA
Sbjct: 181 SEQIFKDA 204
Score = 106 bits (226), Expect = 3e-022
Identities = 49/67 (73%), Positives = 49/67 (73%)
Frame = -3 / -2
Query: 674 ASLNICSLFPXXXXXXXXXXSGRLPVTVKTLLSTTSRYSCLIASLKV*KSSIRSFNFFFT 495
ASL ICSL P SGRLPVTV TLLSTTSRYSC I SL *KSSIRSFNFF T
Sbjct: 203 ASLKICSLLPVSIKSSIVSSSGRLPVTVNTLLSTTSRYSCRIDSLNT*KSSIRSFNFFLT 24
Query: 494 APVVCSL 474
APVVCSL
Sbjct: 23 APVVCSL 3
>gb|BG368961.1|BG368961 HVSMEi0021H10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021H10f, mRNA sequence
Length = 901
Score = 114 bits (244), Expect(2) = 5e-026
Identities = 50/95 (52%), Positives = 68/95 (71%)
Frame = +1 / +1
Query: 190 ASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVG 369
A L F ++V IE ++ L+ LL L +NEES VTKAS+MK IK+RMEKD++EV
Sbjct: 196 AQPGLDGFFEQVREIEKLLETLTKLLKDLQNSNEESKVVTKASAMKDIKRRMEKDVNEVT 375
Query: 370 KIAPQAKTKVDELERDNLSNRQKPGCGKGSAVDRS 474
K+A AK+K+ +L ++NL+N +KPG GKGS VDRS
Sbjct: 376 KVARLAKSKLQQLNKENLANSRKPGFGKGSGVDRS 480
Score = 23.5 bits (45), Expect(2) = 5e-026
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 94 AAMNNLLTDSFELPRRD 144
A M NLL++SFEL + +
Sbjct: 88 ARMRNLLSNSFELNKEE 138
>gb|CB881364.1|CB881364 HM09J09w HM Hordeum vulgare subsp. vulgare cDNA clone HM09J09
3-PRIME, mRNA sequence
Length = 515
Score = 118 bits (252), Expect = 7e-026
Identities = 50/82 (60%), Positives = 63/82 (76%)
Frame = +1 / -3
Query: 685 QGRGQILDTVAEIQERHDAVRDLERKLLELQQIFMDMAVLVEAQGDMINNIETHVSNATN 864
QGRG++L VAEIQERH AV DLER LLELQQ+F DMAVLV AQG+ +++IE HV A +
Sbjct: 510 QGRGEVLGVVAEIQERHGAVADLERSLLELQQVFNDMAVLVAAQGEQLDDIEGHVGRARS 331
Query: 865 HIQQGVSALQNAKKLQRNSRKW 930
+ +G LQ A+K Q++SRKW
Sbjct: 330 FVDRGREQLQVARKHQKSSRKW 265
>gb|BG366137.2|BG366137 HVSMEi0005O19f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0005O19f, mRNA sequence
Length = 619
Score = 85.4 bits (180), Expect(3) = 3e-023
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = +1 / +2
Query: 190 ASDNLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVG 369
A L F ++V IE ++ L+ LL L +NEES V+KASSMK IK+RMEKD++EV
Sbjct: 197 AQPGLDGFFEQVRDIEKLLDTLTKLLRDLGNSNEES*VVSKASSMKDIKRRMEKDVNEVT 376
Query: 370 KIAPQAKTKVDELERDNLSNRQKP 441
+A AK+K+ ++NL+NR KP
Sbjct: 377 NVARLAKSKLPLSNKENLANRGKP 448
Score = 37.7 bits (76), Expect(3) = 3e-023
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1 / +3
Query: 421 LSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAI 552
L + GKGS VDRS T ++ L++R+ +F TLRE +
Sbjct: 429 LQTEESRSFGKGSGVDRSWA*MTFSLTSMLRKRISEFPTLRETL 560
Score = 23.5 bits (45), Expect(3) = 3e-023
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 94 AAMNNLLTDSFELPRRD 144
A M NLL++SFEL + +
Sbjct: 89 ARMRNLLSNSFELNKEE 139
>gb|AY247216.1| Hordeum vulgare subsp. vulgare syntaxin-like protein 3 gene,
partial cds
Length = 553
Score = 109 bits (232), Expect = 4e-023
Identities = 45/114 (39%), Positives = 70/114 (61%)
Frame = +1 / +2
Query: 199 NLKDFLKKVDAIESIIAKLSNLLNKLXTANEESXXVTKASSMKAIKQRMEKDIDEVGKIA 378
NL F V+A++ + L +L + NEE+ A ++KA++ RM+ D+++V K A
Sbjct: 80 NLDQFFSDVEALKEDLRGFETLHKRLQSTNEETKTAHDARAIKALRSRMDGDVEQVLKRA 259
Query: 379 PQAKTKVDELERDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTL 540
K K++ LERDN ++R+ PGCG GS+ DR+R + KKLK+ MDDFQ +
Sbjct: 260 KGVKAKLEALERDNANSRKAPGCGPGSSTDRTRTSVVAGLGKKLKDVMDDFQVI 421
>gb|BQ458502.1|BQ458502 HA05A10r HA Hordeum vulgare subsp. vulgare cDNA clone HA05A10
5-PRIME, mRNA sequence
Length = 456
Score = 105 bits (223), Expect = 7e-022
Identities = 42/109 (38%), Positives = 66/109 (60%)
Frame = +1 / +1
Query: 430 RQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQTLREAIRQXXXXXXXXXXFTVTGNR 609
R GC +G+ +DR+R T ++KKLK+ M DFQ LR+ + +T+TG
Sbjct: 130 RLSAGCREGTTLDRTRTSVTAGLRKKLKDIMLDFQALRQRMMSEYKDTVERRYYTLTGEV 309
Query: 610 PDEETIDDLIETGKSEQIFKDAIQHQGRGQILDTVAEIQERHDAVRDLE 756
P++E I+ +I G+ E+I A+ G+G +L + EIQ+RHDAVR++E
Sbjct: 310 PEDEVIERIISEGRGEEIMSAAVAEHGKGAVLAALNEIQDRHDAVREVE 456
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 474,690,895
Number of Sequences: 312970
Number of extensions: 6856027
Number of successful extensions: 59389
Number of sequences better than 1.0e-020: 44
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 14292442998
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)