TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950089.2.3
(824 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE603265.2|BE603265 HVSMEh0102N13f Hordeum vulgare 5-45 ... 303 8e-082
gb|BU987338.1|BU987338 HF14H19r HF Hordeum vulgare subsp. v... 299 1e-080
gb|BQ463836.1|BQ463836 HG01J11r HG Hordeum vulgare subsp. v... 292 2e-078
gb|CA019755.1|CA019755 HV13A06r HV Hordeum vulgare subsp. v... 291 4e-078
gb|AL503276.1|AL503276 AL503276 Hordeum vulgare Barke roots... 288 3e-077
gb|BU987425.1|BU987425 HF14L15r HF Hordeum vulgare subsp. v... 288 3e-077
gb|CA030550.1|CA030550 HX07G08r HX Hordeum vulgare subsp. v... 285 3e-076
gb|AV916398.1|AV916398 AV916398 K. Sato unpublished cDNA li... 268 2e-071
gb|BE559134.1|BE559134 HV_CEb0023A15f Hordeum vulgare seedl... 191 5e-061
gb|BE194848.2|BE194848 HVSMEh0087D14f Hordeum vulgare 5-45 ... 228 3e-059
gb|BQ470302.1|BQ470302 HX02H13r HX Hordeum vulgare subsp. v... 207 6e-053
gb|AV917913.1|AV917913 AV917913 K. Sato unpublished cDNA li... 201 5e-051
gb|CA024250.1|CA024250 HZ48M15r HZ Hordeum vulgare subsp. v... 186 2e-046
gb|BF623807.2|BF623807 HVSMEa0007B05f Hordeum vulgare seedl... 118 4e-026
gb|BM816042.1|BM816042 HC110A01_T3.ab1 HC Hordeum vulgare s... 118 4e-026
gb|BQ768743.1|BQ768743 EBro08_SQ012_F15_R root, 3 week, dro... 118 4e-026
gb|BI952411.1|BI952411 HVSMEm0006F13f Hordeum vulgare green... 115 4e-025
gb|BQ466175.1|BQ466175 HT01M19T HT Hordeum vulgare subsp. v... 115 4e-025
gb|BM368471.2|BM368471 EBem08_SQ002_G11_R embryo, 40 DPA, n... 115 4e-025
gb|BM368765.2|BM368765 EBem08_SQ004_I17_R embryo, 40 DPA, n... 115 4e-025
gb|BU985299.1|BU985299 HF06L17r HF Hordeum vulgare subsp. v... 115 4e-025
gb|BU985771.1|BU985771 HF08J06r HF Hordeum vulgare subsp. v... 115 4e-025
gb|BU997629.1|BU997629 HI08I18r HI Hordeum vulgare subsp. v... 115 4e-025
gb|CA012015.1|CA012015 HT04D03r HT Hordeum vulgare subsp. v... 115 4e-025
gb|CA012540.1|CA012540 HT05L12r HT Hordeum vulgare subsp. v... 115 4e-025
gb|CB858860.1|CB858860 HI08I18w HI Hordeum vulgare subsp. v... 115 4e-025
gb|CA011445.1|CA011445 HT05L12u HT Hordeum vulgare subsp. v... 114 6e-025
gb|BM816057.1|BM816057 HC03F05_T3.ab1 HC Hordeum vulgare su... 112 3e-024
gb|BQ459902.1|BQ459902 HA07M09r HA Hordeum vulgare subsp. v... 111 4e-024
gb|BU996496.1|BU996496 HM13M20r HM Hordeum vulgare subsp. v... 110 1e-023
gb|BU996712.1|BU996712 HM14H24r HM Hordeum vulgare subsp. v... 110 1e-023
gb|CA004284.1|CA004284 HS17C06r HS Hordeum vulgare subsp. v... 105 4e-022
>gb|BE603265.2|BE603265 HVSMEh0102N13f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102N13f, mRNA sequence
Length = 729
Score = 303 bits (656), Expect = 8e-082
Identities = 124/162 (76%), Positives = 132/162 (81%)
Frame = -3 / +3
Query: 591 GRAGSKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXS 412
G G +MGSGSFLKVLA NFDVLAGPL+SLAYPLYASVRAIETK+ VDDQQWLTYWV S
Sbjct: 18 GGCGREMGSGSFLKVLAKNFDVLAGPLVSLAYPLYASVRAIETKSQVDDQQWLTYWVLYS 197
Query: 411 FITLFELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWY 232
FITLFELTFAPI+EWLPFW Y KLFFNC LV P FNG AYVY+HF RPMFVNRQIVNIWY
Sbjct: 198 FITLFELTFAPILEWLPFWPYGKLFFNCWLVFPCFNGAAYVYEHFARPMFVNRQIVNIWY 377
Query: 231 IXRNEKLGKSDDVXXAAERYIEQNXXXAFXXLISKSTXXSXS 106
+ R +KL K DDV AAE+YIE N AF LISKST S
Sbjct: 378 VPRKDKLSKPDDVLSAAEKYIELNGPEAFEKLISKSTSTKPS 503
Score = 233 bits (504), Expect = 8e-061
Identities = 112/146 (76%), Positives = 115/146 (78%)
Frame = +2 / -3
Query: 122 VDLLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AX 301
VDLL+S SNA F SIY SAA TSS L + SFL Y M TIWRFTNIGR K S*T*A
Sbjct: 487 VDLLISFSNASGPFSSIYFSAAESTSSGLLNLSFLGTYQMLTIWRFTNIGRAKCS*T*AA 308
Query: 302 PLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALT 481
PL QGKT QLKNSF QNGSHS IGAKVSSNKVINE TQ*VSHC*SST FVSIALT
Sbjct: 307 PLKQGKTSQQLKNSFP*GQNGSHSSIGAKVSSNKVINEYSTQ*VSHC*SST*DFVSIALT 128
Query: 482 EAYRG*ASDMSGPARTSKLLASTLRK 559
EAYRG*AS+ SGPARTSK LASTLRK
Sbjct: 127 EAYRG*ASETSGPARTSKFLASTLRK 50
Score = 204 bits (440), Expect = 5e-052
Identities = 90/156 (57%), Positives = 106/156 (67%)
Frame = +1 / -2
Query: 124 RLADELXKCXXXVLFNISLCSXXNIIRFT*LLISXNIPYVXYLAVHKHWPXKMVVNIGXT 303
RLAD L KC + FNI LC IIRFT L++ ++P V YLA+HKHWP KM+VNI T
Sbjct: 485 RLAD*LLKCFWSI*FNIFLCG*EYIIRFTQLILPWDVPDVDYLAIHKHWPRKMLVNISST 306
Query: 304 IEPRQDQXAVKEQLCIRPKWKPLDNWSKS*LKQSDK*VXHPVSEPLLIIYRIFCLYXXXX 483
IE R+D AV+EQ I P+WKP SKS LKQSDK V HPVS+PLLIIY FC
Sbjct: 305 IEARKD*PAVEEQFSIGPEWKPFKYRSKSELKQSDKRVQHPVSKPLLIIYLRFCFNCSHR 126
Query: 484 XXXXXXK*YEWPGKDIEVIGQHLEERSGPHLAPCSS 591
K +WPG+D+EV+GQHLEERSGPHL+P S
Sbjct: 125 GI*RISKRNQWPGEDVEVLGQHLEERSGPHLSPAPS 18
Score = 188 bits (406), Expect = 2e-047
Identities = 96/161 (59%), Positives = 105/161 (65%)
Frame = +3 / -1
Query: 123 *TC**AXQMXXVXFVQYISLQLXXHHQIYLASHFXXYTICXLFGGSQTLAXXNGRKHRQX 302
*TC* A QM V VQYISL+L HHQ+Y T C LFG SQTLA N RKH+Q
Sbjct: 486 *TC*LASQMLLVHLVQYISLRLRVHHQVYSTYPSLGRTRC*LFGDSQTLAAQNARKHKQH 307
Query: 303 H*TKARPXSS*RTALHTTKMEATR*LEQKLAQTK**MSXTPSK*ATADHLQDFLSL*L*Q 482
H*+K R SS*RT H +MEA + EQK AQTK** S PSK*A ADHL + L L Q
Sbjct: 306 H*SKERLASS*RTVFHRARMEAIQVSEQK*AQTK**TSTAPSK*AIADHLLEILFQLLSQ 127
Query: 483 KHIEDKQVI*VARQGHRSYWPAP*GKIRTPSCSLLFLQ*NR 605
+HIEDKQ VAR+G RS WPAP*GKIRTPS S L R
Sbjct: 126 RHIEDKQAKPVARRGRRSSWPAP*GKIRTPSLSRTLLSSTR 4
Score = 186 bits (401), Expect = 1e-046
Identities = 91/157 (57%), Positives = 104/157 (66%)
Frame = -2 / +2
Query: 592 RKSREQDGVRIFPQGAGQ*LRCPCRATHITCLSSICFC*SYRDKKSCR*SAVAHLLGVXL 413
R+ RE+DGVRIFPQGAGQ LR P RAT CLSSIC C S +K S R*SA+A+LLG L
Sbjct: 17 RRVRERDGVRIFPQGAGQELRRPRRATGFACLSSICLCESN*NKISSR*SAMAYLLGAVL 196
Query: 412 IYHFV*ANFCSNYRVASIXXXXXXXXXXXXXXXXVQWXCLCLRPFXXANVCEPPNSXHMV 233
+YHFV*A+FCS+ +ASI +QW CLCLR F ANVCE PNS H+V
Sbjct: 197 VYHFV*AHFCSDT*MASILALWKTVLQLLASLSLLQWCCLCLRAFCAANVCESPNSQHLV 376
Query: 232 YXKK*EAR*I**CXXSCREIY*TKXTXXI*XAHQQVY 122
K+ * **C S REIY*TK T I* A+QQVY
Sbjct: 377 RPKEG*VE*T**CTLSRREIY*TKWTRSI*EANQQVY 487
Score = 79.0 bits (166), Expect(2) = 2e-024
Identities = 44/77 (57%), Positives = 49/77 (63%)
Frame = -1 / +1
Query: 350 MQSCSLTAXWSCLGSMVLPMFTTIXXGQCL*TAK*XTYGIXXEMRS*VNLMMXXXLQRDI 171
M++CS TA S L SMVL MFT+I GQCL* AK* T G S*VNLMM QR+I
Sbjct: 259 MENCSSTAG*SFLASMVLLMFTSILRGQCL*IAK*STSGTSQGRIS*VNLMMYSQPQRNI 438
Query: 170 LNKTXXXHLXSSSASLR 120
LN HL S SASL+
Sbjct: 439 LN*MDQKHLRS*SASLQ 489
Score = 56.1 bits (116), Expect(2) = 2e-024
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = -1 / +1
Query: 593 QEEQGARWGPDLSSRCWPITSMSLPGH 513
+E G RWGPDLSSRCWP TS S PGH
Sbjct: 16 EEGAGERWGPDLSSRCWPRTSTSSPGH 96
>gb|BU987338.1|BU987338 HF14H19r HF Hordeum vulgare subsp. vulgare cDNA clone HF14H19
5-PRIME, mRNA sequence
Length = 602
Score = 299 bits (648), Expect = 1e-080
Identities = 123/161 (76%), Positives = 131/161 (81%)
Frame = -3 / +1
Query: 588 RAGSKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSF 409
R +MGSGSFLKVLA NFDVLAGPL+SLAYPLYASVRAIETK+ VDDQQWLTYWV SF
Sbjct: 1 RHEGEMGSGSFLKVLAKNFDVLAGPLVSLAYPLYASVRAIETKSQVDDQQWLTYWVLYSF 180
Query: 408 ITLFELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYI 229
ITLFELTFAPI+EWLPFW Y KLFFNC LV P FNG AYVY+HF RPMFVNRQIVNIWY+
Sbjct: 181 ITLFELTFAPILEWLPFWPYGKLFFNCWLVFPCFNGAAYVYEHFARPMFVNRQIVNIWYV 360
Query: 228 XRNEKLGKSDDVXXAAERYIEQNXXXAFXXLISKSTXXSXS 106
R +KL K DDV AAE+YIE N AF LISKST S
Sbjct: 361 PRKDKLSKPDDVLSAAEKYIELNGPEAFEKLISKSTSTKPS 483
Score = 233 bits (504), Expect = 8e-061
Identities = 112/146 (76%), Positives = 115/146 (78%)
Frame = +2 / -1
Query: 122 VDLLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AX 301
VDLL+S SNA F SIY SAA TSS L + SFL Y M TIWRFTNIGR K S*T*A
Sbjct: 467 VDLLISFSNASGPFSSIYFSAAESTSSGLLNLSFLGTYQMLTIWRFTNIGRAKCS*T*AA 288
Query: 302 PLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALT 481
PL QGKT QLKNSF QNGSHS IGAKVSSNKVINE TQ*VSHC*SST FVSIALT
Sbjct: 287 PLKQGKTSQQLKNSFP*GQNGSHSSIGAKVSSNKVINEYSTQ*VSHC*SST*DFVSIALT 108
Query: 482 EAYRG*ASDMSGPARTSKLLASTLRK 559
EAYRG*AS+ SGPARTSK LASTLRK
Sbjct: 107 EAYRG*ASETSGPARTSKFLASTLRK 30
Score = 198 bits (426), Expect = 4e-050
Identities = 87/152 (57%), Positives = 104/152 (68%)
Frame = +1 / -3
Query: 124 RLADELXKCXXXVLFNISLCSXXNIIRFT*LLISXNIPYVXYLAVHKHWPXKMVVNIGXT 303
RLAD L KC + FNI LC IIRFT L++ ++P V YLA+HKHWP +M+VNI T
Sbjct: 465 RLAD*LLKCFWSI*FNIFLCG*EYIIRFTQLILPWDVPDVDYLAIHKHWPREMLVNISST 286
Query: 304 IEPRQDQXAVKEQLCIRPKWKPLDNWSKS*LKQSDK*VXHPVSEPLLIIYRIFCLYXXXX 483
IE R+D AV+EQ I P+WKP SKS LKQSDK V HPVS+PLLIIY FC
Sbjct: 285 IEARKD*PAVEEQFSIGPEWKPFKYRSKSELKQSDKRVQHPVSKPLLIIYLRFCFNCSHR 106
Query: 484 XXXXXXK*YEWPGKDIEVIGQHLEERSGPHLA 579
K +WPG+D+EV+GQHLEERSGPHL+
Sbjct: 105 GI*RISKRNQWPGEDVEVLGQHLEERSGPHLS 10
Score = 186 bits (401), Expect = 1e-046
Identities = 93/151 (61%), Positives = 102/151 (67%)
Frame = +3 / -2
Query: 123 *TC**AXQMXXVXFVQYISLQLXXHHQIYLASHFXXYTICXLFGGSQTLAXXNGRKHRQX 302
*TC* A QM V VQYISL+L HHQ+Y T C LFG SQTLA N RKH+Q
Sbjct: 466 *TC*LASQMLLVHLVQYISLRLRVHHQVYSTYPSLGRTRC*LFGDSQTLAARNARKHKQH 287
Query: 303 H*TKARPXSS*RTALHTTKMEATR*LEQKLAQTK**MSXTPSK*ATADHLQDFLSL*L*Q 482
H*+K R SS*RT H +MEA + EQK AQTK** S PSK*A ADHL + L L Q
Sbjct: 286 H*SKERLASS*RTVFHRARMEAIQVSEQK*AQTK**TSTAPSK*AIADHLLEILFQLLSQ 107
Query: 483 KHIEDKQVI*VARQGHRSYWPAP*GKIRTPS 575
+HIEDKQ VAR+G RS WPAP*GKIRTPS
Sbjct: 106 RHIEDKQAKPVARRGRRSSWPAP*GKIRTPS 14
Score = 182 bits (391), Expect = 3e-045
Identities = 89/155 (57%), Positives = 102/155 (65%)
Frame = -2 / +3
Query: 586 SREQDGVRIFPQGAGQ*LRCPCRATHITCLSSICFC*SYRDKKSCR*SAVAHLLGVXLIY 407
+R +DGVRIFPQGAGQ LR P RAT CLSSIC C S +K S R*SA+A+LLG L+Y
Sbjct: 3 ARGRDGVRIFPQGAGQELRRPRRATGFACLSSICLCESN*NKISSR*SAMAYLLGAVLVY 182
Query: 406 HFV*ANFCSNYRVASIXXXXXXXXXXXXXXXXVQWXCLCLRPFXXANVCEPPNSXHMVYX 227
HFV*A+FCS+ +ASI +QW CLCLR F ANVCE PNS H+V
Sbjct: 183 HFV*AHFCSDT*MASILALWKTVLQLLASLSLLQWCCLCLRAFRAANVCESPNSQHLVRP 362
Query: 226 KK*EAR*I**CXXSCREIY*TKXTXXI*XAHQQVY 122
K+ * **C S REIY*TK T I* A+QQVY
Sbjct: 363 KEG*VE*T**CTLSRREIY*TKWTRSI*EANQQVY 467
Score = 79.4 bits (167), Expect(2) = 2e-023
Identities = 44/77 (57%), Positives = 49/77 (63%)
Frame = -1 / +2
Query: 350 MQSCSLTAXWSCLGSMVLPMFTTIXXGQCL*TAK*XTYGIXXEMRS*VNLMMXXXLQRDI 171
M++CS TA S L SMVL MFT+I GQCL* AK* T G S*VNLMM QR+I
Sbjct: 239 MENCSSTAG*SFLASMVLLMFTSISRGQCL*IAK*STSGTSQGRIS*VNLMMYSQPQRNI 418
Query: 170 LNKTXXXHLXSSSASLR 120
LN HL S SASL+
Sbjct: 419 LN*MDQKHLRS*SASLQ 469
Score = 51.9 bits (107), Expect(2) = 2e-023
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -1 / +2
Query: 575 RWGPDLSSRCWPITSMSLPGH 513
RWGPDLSSRCWP TS S PGH
Sbjct: 14 RWGPDLSSRCWPRTSTSSPGH 76
>gb|BQ463836.1|BQ463836 HG01J11r HG Hordeum vulgare subsp. vulgare cDNA clone HG01J11
5-PRIME, mRNA sequence
Length = 574
Score = 292 bits (631), Expect = 2e-078
Identities = 119/153 (77%), Positives = 126/153 (82%)
Frame = -3 / +1
Query: 564 GSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTF 385
GSFLKVLA NFDVLAGPL+SLAYPLYASVRAIETK+ VDDQQWLTYWV SFITLFELTF
Sbjct: 1 GSFLKVLAKNFDVLAGPLVSLAYPLYASVRAIETKSQVDDQQWLTYWVLYSFITLFELTF 180
Query: 384 APIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYIXRNEKLGK 205
API+EWLPFW Y KLFFNC LV P FNG AYVY+HF RPMFVNRQIVNIWY+ R +KL K
Sbjct: 181 APILEWLPFWPYGKLFFNCWLVFPCFNGAAYVYEHFARPMFVNRQIVNIWYVPRKDKLSK 360
Query: 204 SDDVXXAAERYIEQNXXXAFXXLISKSTXXSXS 106
DDV AAE+YIE N AF LISKST S
Sbjct: 361 PDDVLSAAEKYIELNGPEAFEKLISKSTSTKPS 459
Score = 233 bits (504), Expect = 8e-061
Identities = 112/146 (76%), Positives = 115/146 (78%)
Frame = +2 / -3
Query: 122 VDLLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AX 301
VDLL+S SNA F SIY SAA TSS L + SFL Y M TIWRFTNIGR K S*T*A
Sbjct: 443 VDLLISFSNASGPFSSIYFSAAESTSSGLLNLSFLGTYQMLTIWRFTNIGRAKCS*T*AA 264
Query: 302 PLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALT 481
PL QGKT QLKNSF QNGSHS IGAKVSSNKVINE TQ*VSHC*SST FVSIALT
Sbjct: 263 PLKQGKTSQQLKNSFP*GQNGSHSSIGAKVSSNKVINEYSTQ*VSHC*SST*DFVSIALT 84
Query: 482 EAYRG*ASDMSGPARTSKLLASTLRK 559
EAYRG*AS+ SGPARTSK LASTLRK
Sbjct: 83 EAYRG*ASETSGPARTSKFLASTLRK 6
Score = 186 bits (400), Expect = 2e-046
Identities = 83/147 (56%), Positives = 99/147 (67%)
Frame = +1 / -2
Query: 124 RLADELXKCXXXVLFNISLCSXXNIIRFT*LLISXNIPYVXYLAVHKHWPXKMVVNIGXT 303
RLAD L KC + FNI LC IIRFT L++ ++P V YLA+HKHWP +M+VNI T
Sbjct: 441 RLAD*LLKCFWSI*FNIFLCG*EYIIRFTQLILPWDVPDVDYLAIHKHWPREMLVNISST 262
Query: 304 IEPRQDQXAVKEQLCIRPKWKPLDNWSKS*LKQSDK*VXHPVSEPLLIIYRIFCLYXXXX 483
IE R+D AV+EQ I P+WKP SKS LKQSDK V HPVS+PLLIIY FC
Sbjct: 261 IEARKD*PAVEEQFSIGPEWKPFKYRSKSELKQSDKRVQHPVSKPLLIIYLRFCFNCSHR 82
Query: 484 XXXXXXK*YEWPGKDIEVIGQHLEERS 564
K +WPG+D+EV+GQHLEERS
Sbjct: 81 GI*RISKRNQWPGEDVEVLGQHLEERS 1
Score = 177 bits (380), Expect = 1e-043
Identities = 89/147 (60%), Positives = 98/147 (66%)
Frame = +3 / -1
Query: 123 *TC**AXQMXXVXFVQYISLQLXXHHQIYLASHFXXYTICXLFGGSQTLAXXNGRKHRQX 302
*TC* A QM V VQYISL+L HHQ+Y T C LFG SQTLA N RKH+Q
Sbjct: 442 *TC*LASQMLLVHLVQYISLRLRVHHQVYSTYPSLGRTRC*LFGDSQTLAARNARKHKQH 263
Query: 303 H*TKARPXSS*RTALHTTKMEATR*LEQKLAQTK**MSXTPSK*ATADHLQDFLSL*L*Q 482
H*+K R SS*RT H +MEA + EQK AQTK** S PSK*A ADHL + L L Q
Sbjct: 262 H*SKERLASS*RTVFHRARMEAIQVSEQK*AQTK**TSTAPSK*AIADHLLEILFQLLSQ 83
Query: 483 KHIEDKQVI*VARQGHRSYWPAP*GKI 563
+HIEDKQ VAR+G RS WPAP*GKI
Sbjct: 82 RHIEDKQAKPVARRGRRSSWPAP*GKI 2
Score = 170 bits (365), Expect = 1e-041
Identities = 84/147 (57%), Positives = 95/147 (64%)
Frame = -2 / +3
Query: 562 IFPQGAGQ*LRCPCRATHITCLSSICFC*SYRDKKSCR*SAVAHLLGVXLIYHFV*ANFC 383
IFPQGAGQ LR P RAT CLSSIC C S +K S R*SA+A+LLG L+YHFV*A+FC
Sbjct: 3 IFPQGAGQELRRPRRATGFACLSSICLCESN*NKISSR*SAMAYLLGAVLVYHFV*AHFC 182
Query: 382 SNYRVASIXXXXXXXXXXXXXXXXVQWXCLCLRPFXXANVCEPPNSXHMVYXKK*EAR*I 203
S+ +ASI +QW CLCLR F ANVCE PNS H+V K+ *
Sbjct: 183 SDT*MASILALWKTVLQLLASLSLLQWCCLCLRAFRAANVCESPNSQHLVRPKEG*VE*T 362
Query: 202 **CXXSCREIY*TKXTXXI*XAHQQVY 122
**C S REIY*TK T I* A+QQVY
Sbjct: 363 **CTLSRREIY*TKWTRSI*EANQQVY 443
>gb|CA019755.1|CA019755 HV13A06r HV Hordeum vulgare subsp. vulgare cDNA clone HV13A06
5-PRIME, mRNA sequence
Length = 558
Score = 291 bits (629), Expect = 4e-078
Identities = 114/167 (68%), Positives = 135/167 (80%)
Frame = -3 / +2
Query: 627 RAGRER*FCSTAGRAGSKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVD 448
R R++ F ++ R +MGSGSFLKVL +N DVLAGP++SLAYPLYASVRAIETK+P+D
Sbjct: 35 RKERKKRFAASGERIAGQMGSGSFLKVLVSNLDVLAGPIVSLAYPLYASVRAIETKSPID 214
Query: 447 DQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRP 268
DQQWLTYWV SFITLFELTFA +IEWLPFWSY KLFFNC LVLP+FNG A+VY+HF RP
Sbjct: 215 DQQWLTYWVLYSFITLFELTFAAVIEWLPFWSYGKLFFNCWLVLPYFNGAAHVYEHFVRP 394
Query: 267 MFVNRQIVNIWYIXRNEKLGKSDDVXXAAERYIEQNXXXAFXXLISK 127
M VN+Q+VNIWYI + E K DDV AA++YIEQN AF L++K
Sbjct: 395 MIVNQQVVNIWYIPKKENSDKPDDVISAAQKYIEQNGSKAFETLVNK 535
Score = 198 bits (426), Expect = 4e-050
Identities = 97/146 (66%), Positives = 104/146 (71%)
Frame = +2 / -1
Query: 122 VDLLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AX 301
++LL SNA FCS+Y AA TSS L FSF IY M T FT IGR K S*T A
Sbjct: 540 LNLLTRVSNALDPFCSMYFCAAEITSSGLSEFSFFGIYQMFTTCWFTIIGRTKCS*TCAA 361
Query: 302 PLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALT 481
PL GKT QLKNSF DQ GSHSI AKVSSN+VINE TQ*VSHC*SS G FVSIA T
Sbjct: 360 PLK*GKTNQQLKNSFP*DQKGSHSITAAKVSSNRVINEYNTQ*VSHC*SSIGDFVSIART 181
Query: 482 EAYRG*ASDMSGPARTSKLLASTLRK 559
+AYRG*AS+ GPARTS+LL STLRK
Sbjct: 180 DAYRG*ASETMGPARTSRLLTSTLRK 103
Score = 171 bits (367), Expect = 6e-042
Identities = 74/151 (49%), Positives = 98/151 (64%)
Frame = +1 / -3
Query: 124 RLADELXKCXXXVLFNISLCSXXNIIRFT*LLISXNIPYVXYLAVHKHWPXKMVVNIGXT 303
+L +E KC +LFN+ LCS I+ F *+ + NIP V L VH HWP KM++N+ T
Sbjct: 538 KLVNESLKCFRSILFNVFLCS*NYIVGFI*IFLFWNIPDVYNLLVHNHWPHKMLINMRCT 359
Query: 304 IEPRQDQXAVKEQLCIRPKWKPLDNWSKS*LKQSDK*VXHPVSEPLLIIYRIFCLYXXXX 483
++ QDQ A+++Q +RPK +P + SK L+QSDK V HPVSEPLLIIYR FC Y
Sbjct: 358 VKVGQDQPAIEKQFSVRPKREPFNYCSKGELEQSDKRVQHPVSEPLLIIYRRFCFYCSNR 179
Query: 484 XXXXXXK*YEWPGKDIEVIGQHLEERSGPHL 576
+* PG++I+V +HLEERSGPHL
Sbjct: 178 RIQRISE*NYGPGENIQVADEHLEERSGPHL 86
Score = 142 bits (304), Expect = 3e-033
Identities = 76/150 (50%), Positives = 93/150 (62%)
Frame = +3 / -2
Query: 123 *TC**AXQMXXVXFVQYISLQLXXHHQIYLASHFXXYTICXLFGGSQTLAXXNGRKHRQX 302
*TC* QM + FVQ IS+QL H ++YL F YT C GSQ+LA N KH
Sbjct: 539 *TC*RESQML*IHFVQCISVQLKLHRRVYLNFPFLEYTRCLQLAGSQSLAAQNAHKHALH 360
Query: 303 H*TKARPXSS*RTALHTTKMEATR*LEQKLAQTK**MSXTPSK*ATADHLQDFLSL*L*Q 482
*++ARP S+*+T TK A + L+Q+ A+T+** S TPSK*A ADHL + L L L Q
Sbjct: 359 R*SRARPTSN*KTVFRKTKKGAIQLLQQR*ARTE**TSTTPSK*AIADHL*EILFLLLEQ 180
Query: 483 KHIEDKQVI*VARQGHRSYWPAP*GKIRTP 572
H EDK+V AR+ H AP*GKIRTP
Sbjct: 179 THTEDKRVKLWARREHPGC*RAP*GKIRTP 90
Score = 82.2 bits (173), Expect(2) = 4e-025
Identities = 39/64 (60%), Positives = 45/64 (70%)
Frame = -2 / +1
Query: 574 DGVRIFPQGAGQ*LRCPCRATHITCLSSICFC*SYRDKKSCR*SAVAHLLGVXLIYHFV* 395
+GVRIFPQGA Q C RA T LSS+C C S R+K S R*SA+AHLLGV L+YH V
Sbjct: 88 NGVRIFPQGARQQPGCSRRAHSFTRLSSVCVCSSNRNKISYR*SAMAHLLGVVLVYHSVR 267
Query: 394 ANFC 383
A+ C
Sbjct: 268 AHLC 279
Score = 52.4 bits (108), Expect(2) = 4e-025
Identities = 31/76 (40%), Positives = 39/76 (51%)
Frame = -1 / +3
Query: 347 QSCSLTAXWSCLGSMVLPMFTTIXXGQCL*TAK*XTYGIXXEMRS*VNLMMXXXLQRDIL 168
++C A WSC V MF +I GQ L*T+K T GI + + +N M L R+ L
Sbjct: 315 ENCFSIAGWSCPTLTVQRMFMSILCGQ*L*TSKL*TSGIFQKRKIQINPTM*FQLHRNTL 494
Query: 167 NKTXXXHLXSSSASLR 120
NK HL S SLR
Sbjct: 495 NKMDLKHLRLSLTSLR 542
>gb|AL503276.1|AL503276 AL503276 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01H03T 5', mRNA sequence
Length = 700
Score = 288 bits (623), Expect = 3e-077
Identities = 112/160 (70%), Positives = 131/160 (81%)
Frame = -3 / +3
Query: 606 FCSTAGRAGSKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTY 427
F ++ R +MGSGSFLKVL +N DVLAGP++SLAYPLYASVRAIETK+P+DDQQWLTY
Sbjct: 81 FAASGERIAGQMGSGSFLKVLVSNLDVLAGPIVSLAYPLYASVRAIETKSPIDDQQWLTY 260
Query: 426 WVXXSFITLFELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQI 247
WV SFITLFELTFA +IEWLPFWSY KLFFNC LVLP+FNG A+VY+HF RPM VN+Q+
Sbjct: 261 WVLYSFITLFELTFAAVIEWLPFWSYGKLFFNCWLVLPYFNGAAHVYEHFVRPMIVNQQV 440
Query: 246 VNIWYIXRNEKLGKSDDVXXAAERYIEQNXXXAFXXLISK 127
VNIWYI + E K DDV AA++YIEQN AF L++K
Sbjct: 441 VNIWYIPKKENSDKPDDVISAAQKYIEQNGSKAFETLVNK 560
Score = 198 bits (426), Expect = 4e-050
Identities = 97/146 (66%), Positives = 104/146 (71%)
Frame = +2 / -1
Query: 122 VDLLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AX 301
++LL SNA FCS+Y AA TSS L FSF IY M T FT IGR K S*T A
Sbjct: 565 LNLLTRVSNALDPFCSMYFCAAEITSSGLSEFSFFGIYQMFTTCWFTIIGRTKCS*TCAA 386
Query: 302 PLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALT 481
PL GKT QLKNSF DQ GSHSI AKVSSN+VINE TQ*VSHC*SS G FVSIA T
Sbjct: 385 PLK*GKTNQQLKNSFP*DQKGSHSITAAKVSSNRVINEYNTQ*VSHC*SSIGDFVSIART 206
Query: 482 EAYRG*ASDMSGPARTSKLLASTLRK 559
+AYRG*AS+ GPARTS+LL STLRK
Sbjct: 205 DAYRG*ASETMGPARTSRLLTSTLRK 128
Score = 171 bits (367), Expect = 6e-042
Identities = 74/151 (49%), Positives = 98/151 (64%)
Frame = +1 / -3
Query: 124 RLADELXKCXXXVLFNISLCSXXNIIRFT*LLISXNIPYVXYLAVHKHWPXKMVVNIGXT 303
+L +E KC +LFN+ LCS I+ F *+ + NIP V L VH HWP KM++N+ T
Sbjct: 563 KLVNESLKCFRSILFNVFLCS*NYIVGFI*IFLFWNIPDVYNLLVHNHWPHKMLINMRCT 384
Query: 304 IEPRQDQXAVKEQLCIRPKWKPLDNWSKS*LKQSDK*VXHPVSEPLLIIYRIFCLYXXXX 483
++ QDQ A+++Q +RPK +P + SK L+QSDK V HPVSEPLLIIYR FC Y
Sbjct: 383 VKVGQDQPAIEKQFSVRPKREPFNYCSKGELEQSDKRVQHPVSEPLLIIYRRFCFYCSNR 204
Query: 484 XXXXXXK*YEWPGKDIEVIGQHLEERSGPHL 576
+* PG++I+V +HLEERSGPHL
Sbjct: 203 RIQRISE*NYGPGENIQVADEHLEERSGPHL 111
Score = 142 bits (304), Expect = 3e-033
Identities = 76/150 (50%), Positives = 93/150 (62%)
Frame = +3 / -2
Query: 123 *TC**AXQMXXVXFVQYISLQLXXHHQIYLASHFXXYTICXLFGGSQTLAXXNGRKHRQX 302
*TC* QM + FVQ IS+QL H ++YL F YT C GSQ+LA N KH
Sbjct: 564 *TC*RESQML*IHFVQCISVQLKLHRRVYLNFPFLEYTRCLQLAGSQSLAAQNAHKHALH 385
Query: 303 H*TKARPXSS*RTALHTTKMEATR*LEQKLAQTK**MSXTPSK*ATADHLQDFLSL*L*Q 482
*++ARP S+*+T TK A + L+Q+ A+T+** S TPSK*A ADHL + L L L Q
Sbjct: 384 R*SRARPTSN*KTVFRKTKKGAIQLLQQR*ARTE**TSTTPSK*AIADHL*EILFLLLEQ 205
Query: 483 KHIEDKQVI*VARQGHRSYWPAP*GKIRTP 572
H EDK+V AR+ H AP*GKIRTP
Sbjct: 204 THTEDKRVKLWARREHPGC*RAP*GKIRTP 115
Score = 82.2 bits (173), Expect(2) = 4e-025
Identities = 39/64 (60%), Positives = 45/64 (70%)
Frame = -2 / +2
Query: 574 DGVRIFPQGAGQ*LRCPCRATHITCLSSICFC*SYRDKKSCR*SAVAHLLGVXLIYHFV* 395
+GVRIFPQGA Q C RA T LSS+C C S R+K S R*SA+AHLLGV L+YH V
Sbjct: 113 NGVRIFPQGARQQPGCSRRAHSFTRLSSVCVCSSNRNKISYR*SAMAHLLGVVLVYHSVR 292
Query: 394 ANFC 383
A+ C
Sbjct: 293 AHLC 304
Score = 52.4 bits (108), Expect(2) = 4e-025
Identities = 31/76 (40%), Positives = 39/76 (51%)
Frame = -1 / +1
Query: 347 QSCSLTAXWSCLGSMVLPMFTTIXXGQCL*TAK*XTYGIXXEMRS*VNLMMXXXLQRDIL 168
++C A WSC V MF +I GQ L*T+K T GI + + +N M L R+ L
Sbjct: 340 ENCFSIAGWSCPTLTVQRMFMSILCGQ*L*TSKL*TSGIFQKRKIQINPTM*FQLHRNTL 519
Query: 167 NKTXXXHLXSSSASLR 120
NK HL S SLR
Sbjct: 520 NKMDLKHLRLSLTSLR 567
>gb|BU987425.1|BU987425 HF14L15r HF Hordeum vulgare subsp. vulgare cDNA clone HF14L15
5-PRIME, mRNA sequence
Length = 639
Score = 288 bits (623), Expect = 3e-077
Identities = 112/160 (70%), Positives = 131/160 (81%)
Frame = -3 / +2
Query: 606 FCSTAGRAGSKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTY 427
F ++ R +MGSGSFLKVL +N DVLAGP++SLAYPLYASVRAIETK+P+DDQQWLTY
Sbjct: 77 FAASGERIAGQMGSGSFLKVLVSNLDVLAGPIVSLAYPLYASVRAIETKSPIDDQQWLTY 256
Query: 426 WVXXSFITLFELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQI 247
WV SFITLFELTFA +IEWLPFWSY KLFFNC LVLP+FNG A+VY+HF RPM VN+Q+
Sbjct: 257 WVLYSFITLFELTFAAVIEWLPFWSYGKLFFNCWLVLPYFNGAAHVYEHFVRPMIVNQQV 436
Query: 246 VNIWYIXRNEKLGKSDDVXXAAERYIEQNXXXAFXXLISK 127
VNIWYI + E K DDV AA++YIEQN AF L++K
Sbjct: 437 VNIWYIPKKENSDKPDDVISAAQKYIEQNGSKAFETLVNK 556
Score = 198 bits (426), Expect = 4e-050
Identities = 97/146 (66%), Positives = 104/146 (71%)
Frame = +2 / -1
Query: 122 VDLLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AX 301
++LL SNA FCS+Y AA TSS L FSF IY M T FT IGR K S*T A
Sbjct: 561 LNLLTRVSNALDPFCSMYFCAAEITSSGLSEFSFFGIYQMFTTCWFTIIGRTKCS*TCAA 382
Query: 302 PLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALT 481
PL GKT QLKNSF DQ GSHSI AKVSSN+VINE TQ*VSHC*SS G FVSIA T
Sbjct: 381 PLK*GKTNQQLKNSFP*DQKGSHSITAAKVSSNRVINEYNTQ*VSHC*SSIGDFVSIART 202
Query: 482 EAYRG*ASDMSGPARTSKLLASTLRK 559
+AYRG*AS+ GPARTS+LL STLRK
Sbjct: 201 DAYRG*ASETMGPARTSRLLTSTLRK 124
Score = 171 bits (367), Expect = 6e-042
Identities = 74/151 (49%), Positives = 98/151 (64%)
Frame = +1 / -3
Query: 124 RLADELXKCXXXVLFNISLCSXXNIIRFT*LLISXNIPYVXYLAVHKHWPXKMVVNIGXT 303
+L +E KC +LFN+ LCS I+ F *+ + NIP V L VH HWP KM++N+ T
Sbjct: 559 KLVNESLKCFRSILFNVFLCS*NYIVGFI*IFLFWNIPDVYNLLVHNHWPHKMLINMRCT 380
Query: 304 IEPRQDQXAVKEQLCIRPKWKPLDNWSKS*LKQSDK*VXHPVSEPLLIIYRIFCLYXXXX 483
++ QDQ A+++Q +RPK +P + SK L+QSDK V HPVSEPLLIIYR FC Y
Sbjct: 379 VKVGQDQPAIEKQFSVRPKREPFNYCSKGELEQSDKRVQHPVSEPLLIIYRRFCFYCSNR 200
Query: 484 XXXXXXK*YEWPGKDIEVIGQHLEERSGPHL 576
+* PG++I+V +HLEERSGPHL
Sbjct: 199 RIQRISE*NYGPGENIQVADEHLEERSGPHL 107
Score = 142 bits (304), Expect = 3e-033
Identities = 76/150 (50%), Positives = 93/150 (62%)
Frame = +3 / -2
Query: 123 *TC**AXQMXXVXFVQYISLQLXXHHQIYLASHFXXYTICXLFGGSQTLAXXNGRKHRQX 302
*TC* QM + FVQ IS+QL H ++YL F YT C GSQ+LA N KH
Sbjct: 560 *TC*RESQML*IHFVQCISVQLKLHRRVYLNFPFLEYTRCLQLAGSQSLAAQNAHKHALH 381
Query: 303 H*TKARPXSS*RTALHTTKMEATR*LEQKLAQTK**MSXTPSK*ATADHLQDFLSL*L*Q 482
*++ARP S+*+T TK A + L+Q+ A+T+** S TPSK*A ADHL + L L L Q
Sbjct: 380 R*SRARPTSN*KTVFRKTKKGAIQLLQQR*ARTE**TSTTPSK*AIADHL*EILFLLLEQ 201
Query: 483 KHIEDKQVI*VARQGHRSYWPAP*GKIRTP 572
H EDK+V AR+ H AP*GKIRTP
Sbjct: 200 THTEDKRVKLWARREHPGC*RAP*GKIRTP 111
Score = 82.2 bits (173), Expect(2) = 4e-025
Identities = 39/64 (60%), Positives = 45/64 (70%)
Frame = -2 / +1
Query: 574 DGVRIFPQGAGQ*LRCPCRATHITCLSSICFC*SYRDKKSCR*SAVAHLLGVXLIYHFV* 395
+GVRIFPQGA Q C RA T LSS+C C S R+K S R*SA+AHLLGV L+YH V
Sbjct: 109 NGVRIFPQGARQQPGCSRRAHSFTRLSSVCVCSSNRNKISYR*SAMAHLLGVVLVYHSVR 288
Query: 394 ANFC 383
A+ C
Sbjct: 289 AHLC 300
Score = 52.4 bits (108), Expect(2) = 4e-025
Identities = 31/76 (40%), Positives = 39/76 (51%)
Frame = -1 / +3
Query: 347 QSCSLTAXWSCLGSMVLPMFTTIXXGQCL*TAK*XTYGIXXEMRS*VNLMMXXXLQRDIL 168
++C A WSC V MF +I GQ L*T+K T GI + + +N M L R+ L
Sbjct: 336 ENCFSIAGWSCPTLTVQRMFMSILCGQ*L*TSKL*TSGIFQKRKIQINPTM*FQLHRNTL 515
Query: 167 NKTXXXHLXSSSASLR 120
NK HL S SLR
Sbjct: 516 NKMDLKHLRLSLTSLR 563
>gb|CA030550.1|CA030550 HX07G08r HX Hordeum vulgare subsp. vulgare cDNA clone HX07G08
5-PRIME, mRNA sequence
Length = 546
Score = 285 bits (616), Expect = 3e-076
Identities = 118/161 (73%), Positives = 126/161 (78%)
Frame = -3 / +1
Query: 588 RAGSKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSF 409
R + G F KVLA NFDVLAGPL+SLAYPLYASVRAIETK+ VDDQQWLTYWV SF
Sbjct: 1 RTRERDGVRIFPKVLAKNFDVLAGPLVSLAYPLYASVRAIETKSQVDDQQWLTYWVLYSF 180
Query: 408 ITLFELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYI 229
ITLFELTFAPI+EWLPFW Y KLFFNC LV P FNG AYVY+HF RPMFVNRQIVNIWY+
Sbjct: 181 ITLFELTFAPILEWLPFWPYGKLFFNCWLVFPCFNGAAYVYEHFARPMFVNRQIVNIWYV 360
Query: 228 XRNEKLGKSDDVXXAAERYIEQNXXXAFXXLISKSTXXSXS 106
R +KL K DDV AAE+YIE N AF LISKST S
Sbjct: 361 PRKDKLSKPDDVLSAAEKYIELNGPEAFEKLISKSTSTKPS 483
Score = 230 bits (497), Expect(2) = 2e-061
Identities = 111/146 (76%), Positives = 114/146 (78%)
Frame = +2 / -2
Query: 122 VDLLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AX 301
VDLL+S SNA F SIY SAA TSS L + SFL Y M TIWRFTNIGR K S*T*A
Sbjct: 467 VDLLISFSNASGPFSSIYFSAAESTSSGLLNLSFLGTYQMLTIWRFTNIGRAKCS*T*AA 288
Query: 302 PLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALT 481
PL QGKT QLKNSF QNGSHS IGAKVSSNKVINE TQ*VSHC*SST FVSIALT
Sbjct: 287 PLKQGKTSQQLKNSFP*GQNGSHSSIGAKVSSNKVINEYSTQ*VSHC*SST*DFVSIALT 108
Query: 482 EAYRG*ASDMSGPARTSKLLASTLRK 559
EAYRG*AS+ SGPARTSK LASTL K
Sbjct: 107 EAYRG*ASETSGPARTSKFLASTLGK 30
Score = 179 bits (386), Expect = 1e-044
Identities = 81/153 (52%), Positives = 98/153 (64%)
Frame = +1 / -1
Query: 124 RLADELXKCXXXVLFNISLCSXXNIIRFT*LLISXNIPYVXYLAVHKHWPXKMVVNIGXT 303
RLAD L KC + FNI LC IIRFT L++ ++P V YLA+HKHWP +M+VNI T
Sbjct: 465 RLAD*LLKCFWSI*FNIFLCG*EYIIRFTQLILPWDVPDVDYLAIHKHWPREMLVNISST 286
Query: 304 IEPRQDQXAVKEQLCIRPKWKPLDNWSKS*LKQSDK*VXHPVSEPLLIIYRIFCLYXXXX 483
IE R+D AV+EQ I P+WKP SKS LKQSDK V HPVS+PLLIIY FC
Sbjct: 285 IEARKD*PAVEEQFSIGPEWKPFKYRSKSELKQSDKRVQHPVSKPLLIIYLRFCFNCSHR 106
Query: 484 XXXXXXK*YEWPGKDIEVIGQHLEERSGPHLAP 582
K +WPG+D+EV+GQHL + P P
Sbjct: 105 GI*RISKRNQWPGEDVEVLGQHLRKDPDPISLP 7
Score = 170 bits (365), Expect(2) = 1e-042
Identities = 86/144 (59%), Positives = 95/144 (65%)
Frame = +3 / -3
Query: 123 *TC**AXQMXXVXFVQYISLQLXXHHQIYLASHFXXYTICXLFGGSQTLAXXNGRKHRQX 302
*TC* A QM V VQYISL+L HHQ+Y T C LFG SQTLA N RKH+Q
Sbjct: 466 *TC*LASQMLLVHLVQYISLRLRVHHQVYSTYPSLGRTRC*LFGDSQTLAARNARKHKQH 287
Query: 303 H*TKARPXSS*RTALHTTKMEATR*LEQKLAQTK**MSXTPSK*ATADHLQDFLSL*L*Q 482
H*+K R SS*RT H +MEA + EQK AQTK** S PSK*A ADHL + L L Q
Sbjct: 286 H*SKERLASS*RTVFHRARMEAIQVSEQK*AQTK**TSTAPSK*AIADHLLEILFQLLSQ 107
Query: 483 KHIEDKQVI*VARQGHRSYWPAP* 554
+HIEDKQ VAR+G RS WPAP*
Sbjct: 106 RHIEDKQAKPVARRGRRSSWPAP* 35
Score = 160 bits (343), Expect(2) = 9e-041
Identities = 80/143 (55%), Positives = 91/143 (63%)
Frame = -2 / +3
Query: 550 GAGQ*LRCPCRATHITCLSSICFC*SYRDKKSCR*SAVAHLLGVXLIYHFV*ANFCSNYR 371
GAGQ LR P RAT CLSSIC C S +K S R*SA+A+LLG L+YHFV*A+FCS+
Sbjct: 39 GAGQELRRPRRATGFACLSSICLCESN*NKISSR*SAMAYLLGAVLVYHFV*AHFCSDT* 218
Query: 370 VASIXXXXXXXXXXXXXXXXVQWXCLCLRPFXXANVCEPPNSXHMVYXKK*EAR*I**CX 191
+ASI +QW CLCLR F ANVCE PNS H+V K+ * **C
Sbjct: 219 MASILALWKTVLQLLASLSLLQWCCLCLRAFRAANVCESPNSQHLVRPKEG*VE*T**CT 398
Query: 190 XSCREIY*TKXTXXI*XAHQQVY 122
S REIY*TK T I* A+QQVY
Sbjct: 399 LSRREIY*TKWTRSI*EANQQVY 467
Score = 27.2 bits (53), Expect(2) = 9e-041
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = -2 / +1
Query: 589 KSREQDGVRIFPQ 551
++RE+DGVRIFP+
Sbjct: 1 RTRERDGVRIFPK 39
Score = 25.8 bits (50), Expect(2) = 2e-061
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 556 ERSGPHLAPCS 588
ERSGPHL+P S
Sbjct: 34 ERSGPHLSPSS 2
Score = 23.1 bits (44), Expect(2) = 1e-042
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 555 GKIRTPSCSLL 587
GKIRTPS SL+
Sbjct: 35 GKIRTPSLSLV 3
>gb|AV916398.1|AV916398 AV916398 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17a21 5', mRNA sequence
Length = 637
Score = 268 bits (580), Expect = 2e-071
Identities = 104/146 (71%), Positives = 121/146 (82%)
Frame = -3 / +3
Query: 564 GSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTF 385
G F +VL +N DVLAGP++SLAYPLYASVRAIETK+P+DDQQWLTYWV SFITLFELTF
Sbjct: 12 GIFPQVLVSNLDVLAGPIVSLAYPLYASVRAIETKSPIDDQQWLTYWVLYSFITLFELTF 191
Query: 384 APIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVNIWYIXRNEKLGK 205
A +IEWLPFWSY KLFFNC LVLP+FNG A+VY+HF RPM VN+Q+VNIWYI + E K
Sbjct: 192 AAVIEWLPFWSYGKLFFNCWLVLPYFNGAAHVYEHFVRPMIVNQQVVNIWYIPKKENSDK 371
Query: 204 SDDVXXAAERYIEQNXXXAFXXLISK 127
DDV AA++YIEQN AF L++K
Sbjct: 372 PDDVISAAQKYIEQNGSKAFETLVNK 449
Score = 191 bits (412), Expect = 4e-048
Identities = 94/143 (65%), Positives = 101/143 (70%)
Frame = +2 / -1
Query: 122 VDLLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AX 301
++LL SNA FCS+Y AA TSS L FSF IY M T FT IGR K S*T A
Sbjct: 454 LNLLTRVSNALDPFCSMYFCAAEITSSGLSEFSFFGIYQMFTTCWFTIIGRTKCS*TCAA 275
Query: 302 PLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALT 481
PL GKT QLKNSF DQ GSHSI AKVSSN+VINE TQ*VSHC*SS G FVSIA T
Sbjct: 274 PLK*GKTNQQLKNSFP*DQKGSHSITAAKVSSNRVINEYNTQ*VSHC*SSIGDFVSIART 95
Query: 482 EAYRG*ASDMSGPARTSKLLAST 550
+AYRG*AS+ GPARTS+LL ST
Sbjct: 94 DAYRG*ASETMGPARTSRLLTST 26
Score = 151 bits (324), Expect = 5e-036
Identities = 66/145 (45%), Positives = 91/145 (62%)
Frame = +1 / -3
Query: 124 RLADELXKCXXXVLFNISLCSXXNIIRFT*LLISXNIPYVXYLAVHKHWPXKMVVNIGXT 303
+L +E KC +LFN+ LCS I+ F *+ + NIP V L VH HWP KM++N+ T
Sbjct: 452 KLVNESLKCFRSILFNVFLCS*NYIVGFI*IFLFWNIPDVYNLLVHNHWPHKMLINMRCT 273
Query: 304 IEPRQDQXAVKEQLCIRPKWKPLDNWSKS*LKQSDK*VXHPVSEPLLIIYRIFCLYXXXX 483
++ QDQ A+++Q +RPK +P + SK L+QSDK V HPVSEPLLIIYR FC Y
Sbjct: 272 VKVGQDQPAIEKQFSVRPKREPFNYCSKGELEQSDKRVQHPVSEPLLIIYRRFCFYCSNR 93
Query: 484 XXXXXXK*YEWPGKDIEVIGQHLEE 558
+* PG++I+V +HL +
Sbjct: 92 RIQRISE*NYGPGENIQVADEHLRK 18
Score = 127 bits (271), Expect = 1e-028
Identities = 69/143 (48%), Positives = 86/143 (60%)
Frame = +3 / -2
Query: 123 *TC**AXQMXXVXFVQYISLQLXXHHQIYLASHFXXYTICXLFGGSQTLAXXNGRKHRQX 302
*TC* QM + FVQ IS+QL H ++YL F YT C GSQ+LA N KH
Sbjct: 453 *TC*RESQML*IHFVQCISVQLKLHRRVYLNFPFLEYTRCLQLAGSQSLAAQNAHKHALH 274
Query: 303 H*TKARPXSS*RTALHTTKMEATR*LEQKLAQTK**MSXTPSK*ATADHLQDFLSL*L*Q 482
*++ARP S+*+T TK A + L+Q+ A+T+** S TPSK*A ADHL + L L L Q
Sbjct: 273 R*SRARPTSN*KTVFRKTKKGAIQLLQQR*ARTE**TSTTPSK*AIADHL*EILFLLLEQ 94
Query: 483 KHIEDKQVI*VARQGHRSYWPAP 551
H EDK+V AR+ H AP
Sbjct: 93 THTEDKRVKLWARREHPGC*RAP 25
>gb|BE559134.1|BE559134 HV_CEb0023A15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023A15f, mRNA sequence
Length = 551
Score = 191 bits (411), Expect(2) = 5e-061
Identities = 71/87 (81%), Positives = 79/87 (90%)
Frame = -3 / +1
Query: 489 YASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYAKLFFNCXLVLPW 310
YASVRAIETK+P+DDQQWLTYWV SFITLFELTFA +IEWLPFWSY KLFFNC LVLP+
Sbjct: 289 YASVRAIETKSPIDDQQWLTYWVLYSFITLFELTFAAVIEWLPFWSYGKLFFNCWLVLPY 468
Query: 309 FNGXAYVYDHFXRPMFVNRQIVNIWYI 229
FNG A+VY+HF RPM VN+Q+VNIWYI
Sbjct: 469 FNGAAHVYEHFVRPMIVNQQVVNIWYI 549
Score = 123 bits (263), Expect(2) = 3e-035
Identities = 61/87 (70%), Positives = 63/87 (72%)
Frame = +2 / -1
Query: 230 IYHMXTIWRFTNIGRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVI 409
IY M T FT IGR K S*T A PL GKT QLKNSF DQ GSHSI AKVSSN+VI
Sbjct: 548 IYQMFTTCWFTIIGRTKCS*TCAAPLK*GKTNQQLKNSFP*DQKGSHSITAAKVSSNRVI 369
Query: 410 NEXXTQ*VSHC*SSTGFFVSIALTEAY 490
NE TQ*VSHC*SS G FVSIA T+AY
Sbjct: 368 NEYNTQ*VSHC*SSIGDFVSIARTDAY 288
Score = 111 bits (237), Expect(2) = 1e-029
Identities = 46/81 (56%), Positives = 58/81 (71%)
Frame = +1 / -3
Query: 229 NIPYVXYLAVHKHWPXKMVVNIGXTIEPRQDQXAVKEQLCIRPKWKPLDNWSKS*LKQSD 408
NIP V L VH HWP KM++N+ T++ QDQ A+++Q +RPK +P + SK L+QSD
Sbjct: 549 NIPDVYNLLVHNHWPHKMLINMRCTVKVGQDQPAIEKQFSVRPKREPFNYCSKGELEQSD 370
Query: 409 K*VXHPVSEPLLIIYRIFCLY 471
K V HPVSEPLLIIYR FC Y
Sbjct: 369 KRVQHPVSEPLLIIYRRFCFY 307
Score = 63.8 bits (133), Expect(2) = 5e-061
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = -3 / +3
Query: 606 FCSTAGRAGSKMGSGSFLKVLANNFDVLAGPLISLAYPLYASV 478
F ++ R +MGSGSFLKVL +N DVLAGP++SLAYPL +V
Sbjct: 66 FAASGERIAGQMGSGSFLKVLVSNLDVLAGPIVSLAYPL*VNV 194
Score = 45.5 bits (93), Expect(2) = 3e-035
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +2 / -2
Query: 479 TEAYRG*ASDMSGPARTSKLLASTLRK 559
T YRG*AS+ GPARTS+LL STLRK
Sbjct: 193 TFTYRG*ASETMGPARTSRLLTSTLRK 113
Score = 40.0 bits (81), Expect(2) = 1e-029
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +1 / -1
Query: 517 PGKDIEVIGQHLEERSGPHL 576
PG++I+V +HLEERSGPHL
Sbjct: 155 PGENIQVADEHLEERSGPHL 96
>gb|BE194848.2|BE194848 HVSMEh0087D14f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0087D14f, mRNA sequence
Length = 486
Score = 228 bits (492), Expect = 3e-059
Identities = 88/118 (74%), Positives = 101/118 (85%)
Frame = -3 / +2
Query: 606 FCSTAGRAGSKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTY 427
F ++ R +MGSGSFLKVL +N DVLAGP++SLAYPLYASVRAIETK+P+DDQQWLTY
Sbjct: 131 FAASGERIAGQMGSGSFLKVLVSNLDVLAGPIVSLAYPLYASVRAIETKSPIDDQQWLTY 310
Query: 426 WVXXSFITLFELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNR 253
WV SFITLFELTFA +IEWLP WSY KLFFNC LVLP+FNG A+VY+HF RPM VN+
Sbjct: 311 WVLYSFITLFELTFAAVIEWLPXWSYGKLFFNCWLVLPYFNGAAHVYEHFVRPMIVNQ 484
Score = 152 bits (327), Expect = 2e-036
Identities = 74/101 (73%), Positives = 78/101 (77%)
Frame = +2 / -1
Query: 257 FTNIGRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VS 436
FT IGR K S*T A PL GKT QLKNSF D GSHSI AKVSSN+VINE TQ*VS
Sbjct: 480 FTIIGRTKCS*TCAAPLK*GKTNQQLKNSFP*DXKGSHSITAAKVSSNRVINEYNTQ*VS 301
Query: 437 HC*SSTGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
HC*SS G FVSIA T+AYRG*AS+ GPARTS+LL STLRK
Sbjct: 300 HC*SSIGDFVSIARTDAYRG*ASETMGPARTSRLLTSTLRK 178
Score = 131 bits (281), Expect = 4e-030
Identities = 55/107 (51%), Positives = 72/107 (67%)
Frame = +1 / -3
Query: 256 VHKHWPXKMVVNIGXTIEPRQDQXAVKEQLCIRPKWKPLDNWSKS*LKQSDK*VXHPVSE 435
VH HWP KM++N+ T++ QDQ A+++Q +RP +P + SK L+QSDK V HPVSE
Sbjct: 481 VHNHWPHKMLINMRCTVKVGQDQPAIEKQFSVRPXREPFNYCSKGELEQSDKRVQHPVSE 302
Query: 436 PLLIIYRIFCLYXXXXXXXXXXK*YEWPGKDIEVIGQHLEERSGPHL 576
PLLIIYR FC Y +* PG++I+V +HLEERSGPHL
Sbjct: 301 PLLIIYRRFCFYCSNRRIQRISE*NYGPGENIQVADEHLEERSGPHL 161
Score = 101 bits (215), Expect = 6e-021
Identities = 55/106 (51%), Positives = 68/106 (64%)
Frame = +3 / -2
Query: 255 GSQTLAXXNGRKHRQXH*TKARPXSS*RTALHTTKMEATR*LEQKLAQTK**MSXTPSK* 434
GSQ+LA N KH *++ARP S+*+T T A + L+Q+ A+T+** S TPSK*
Sbjct: 482 GSQSLAAQNAHKHALHR*SRARPTSN*KTVFRKTXKGAIQLLQQR*ARTE**TSTTPSK* 303
Query: 435 ATADHLQDFLSL*L*QKHIEDKQVI*VARQGHRSYWPAP*GKIRTP 572
A ADHL + L L L Q H EDK+V AR+ H AP*GKIRTP
Sbjct: 302 AIADHL*EILFLLLEQTHTEDKRVKLWARREHPGC*RAP*GKIRTP 165
>gb|BQ470302.1|BQ470302 HX02H13r HX Hordeum vulgare subsp. vulgare cDNA clone HX02H13
5-PRIME, mRNA sequence
Length = 530
Score = 207 bits (447), Expect = 6e-053
Identities = 83/100 (83%), Positives = 87/100 (87%)
Frame = -3 / +2
Query: 591 GRAGSKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXS 412
G G +MGSGSFLKVLA NFDVLAGPL+SLAYPLYASVRAIETK+ VDDQQWLTYWV S
Sbjct: 230 GGCGREMGSGSFLKVLAKNFDVLAGPLVSLAYPLYASVRAIETKSQVDDQQWLTYWVLYS 409
Query: 411 FITLFELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAY 292
FITLFELTFAPI+EWLPFW Y KLFFNC LV P FNG AY
Sbjct: 410 FITLFELTFAPILEWLPFWPYGKLFFNCWLVFPCFNGAAY 529
Score = 155 bits (333), Expect = 3e-037
Identities = 74/89 (83%), Positives = 75/89 (84%)
Frame = +2 / -3
Query: 293 *AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSI 472
*A PL QGKT QLKNSF QNGSHS IGAKVSSNKVINE TQ*VSHC*SST FVSI
Sbjct: 528 *AAPLKQGKTSQQLKNSFP*GQNGSHSSIGAKVSSNKVINEYSTQ*VSHC*SST*DFVSI 349
Query: 473 ALTEAYRG*ASDMSGPARTSKLLASTLRK 559
ALTEAYRG*AS+ SGPARTSK LASTLRK
Sbjct: 348 ALTEAYRG*ASETSGPARTSKFLASTLRK 262
Score = 130 bits (279), Expect = 8e-030
Identities = 58/100 (58%), Positives = 67/100 (67%)
Frame = +1 / -2
Query: 292 IGXTIEPRQDQXAVKEQLCIRPKWKPLDNWSKS*LKQSDK*VXHPVSEPLLIIYRIFCLY 471
I TIE R+D AV+EQ I P+WKP SKS LKQSDK V HPVS+PLLIIY FC
Sbjct: 529 ISSTIEARKD*PAVEEQFSIGPEWKPFKYRSKSELKQSDKRVQHPVSKPLLIIYLRFCFN 350
Query: 472 XXXXXXXXXXK*YEWPGKDIEVIGQHLEERSGPHLAPCSS 591
K +WPG+D+EV+GQHLEERSGPHL+P S
Sbjct: 349 CSHRGI*RISKRNQWPGEDVEVLGQHLEERSGPHLSPAPS 230
Score = 127 bits (271), Expect = 1e-028
Identities = 64/106 (60%), Positives = 72/106 (67%)
Frame = +3 / -1
Query: 291 HRQXH*TKARPXSS*RTALHTTKMEATR*LEQKLAQTK**MSXTPSK*ATADHLQDFLSL 470
H+Q H*+K R SS*RT H +MEA + EQK AQTK** S PSK*A ADHL + L
Sbjct: 530 HKQHH*SKERLASS*RTVFHRARMEAIQVSEQK*AQTK**TSTAPSK*AIADHLLEILFQ 351
Query: 471 *L*QKHIEDKQVI*VARQGHRSYWPAP*GKIRTPSCSLLFLQ*NRT 608
L Q+HIEDKQ VAR+G RS WPAP*GKIRTPS S L R+
Sbjct: 350 LLSQRHIEDKQAKPVARRGRRSSWPAP*GKIRTPSLSRTLLSSTRS 213
Score = 119 bits (254), Expect = 2e-026
Identities = 56/100 (56%), Positives = 66/100 (66%)
Frame = -2 / +1
Query: 592 RKSREQDGVRIFPQGAGQ*LRCPCRATHITCLSSICFC*SYRDKKSCR*SAVAHLLGVXL 413
R+ RE+DGVRIFPQGAGQ LR P RAT CLSSIC C S +K S R*SA+A+LLG L
Sbjct: 229 RRVRERDGVRIFPQGAGQELRRPRRATGFACLSSICLCESN*NKISSR*SAMAYLLGAVL 408
Query: 412 IYHFV*ANFCSNYRVASIXXXXXXXXXXXXXXXXVQWXCL 293
+YHFV*A+FCS+ +ASI +QW CL
Sbjct: 409 VYHFV*AHFCSDT*MASILALWKTVLQLLASLSLLQWCCL 528
>gb|AV917913.1|AV917913 AV917913 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17a21 3', mRNA sequence
Length = 675
Score = 201 bits (433), Expect = 5e-051
Identities = 76/108 (70%), Positives = 87/108 (80%)
Frame = -3 / -2
Query: 450 DDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
DDQQWLTYWV SFITLFELTFA +IEWLPFWSY KLFFNC LVLP+FNG A+VY+HF R
Sbjct: 674 DDQQWLTYWVLYSFITLFELTFAAVIEWLPFWSYGKLFFNCWLVLPYFNGAAHVYEHFVR 495
Query: 270 PMFVNRQIVNIWYIXRNEKLGKSDDVXXAAERYIEQNXXXAFXXLISK 127
PM VN+Q+VNIWYI + E K DDV AA++YIEQN AF L++K
Sbjct: 494 PMIVNQQVVNIWYIPKKENSDKPDDVISAAQKYIEQNGSKAFETLVNK 351
Score = 141 bits (302), Expect = 6e-033
Identities = 70/110 (63%), Positives = 74/110 (67%)
Frame = +2 / +1
Query: 122 VDLLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSFLXIYHMXTIWRFTNIGRXKWS*T*AX 301
++LL SNA FCS+Y AA TSS L FSF IY M T FT IGR K S*T A
Sbjct: 346 LNLLTRVSNALDPFCSMYFCAAEITSSGLSEFSFFGIYQMFTTCWFTIIGRTKCS*TCAA 525
Query: 302 PLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SS 451
PL GKT QLKNSF DQ GSHSI AKVSSN+VINE TQ*VSHC*SS
Sbjct: 526 PLK*GKTNQQLKNSFP*DQKGSHSITAAKVSSNRVINEYNTQ*VSHC*SS 675
Score = 125 bits (268), Expect = 3e-028
Identities = 54/109 (49%), Positives = 73/109 (66%)
Frame = +1 / +3
Query: 124 RLADELXKCXXXVLFNISLCSXXNIIRFT*LLISXNIPYVXYLAVHKHWPXKMVVNIGXT 303
+L +E KC +LFN+ LCS I+ F *+ + NIP V L VH HWP KM++N+ T
Sbjct: 348 KLVNESLKCFRSILFNVFLCS*NYIVGFI*IFLFWNIPDVYNLLVHNHWPHKMLINMRCT 527
Query: 304 IEPRQDQXAVKEQLCIRPKWKPLDNWSKS*LKQSDK*VXHPVSEPLLII 450
++ QDQ A+++Q +RPK +P + SK L+QSDK V HPVSEPLLII
Sbjct: 528 VKVGQDQPAIEKQFSVRPKREPFNYCSKGELEQSDKRVQHPVSEPLLII 674
Score = 107 bits (228), Expect = 9e-023
Identities = 54/109 (49%), Positives = 68/109 (62%)
Frame = +3 / +2
Query: 123 *TC**AXQMXXVXFVQYISLQLXXHHQIYLASHFXXYTICXLFGGSQTLAXXNGRKHRQX 302
*TC* QM + FVQ IS+QL H ++YL F YT C GSQ+LA N KH
Sbjct: 347 *TC*RESQML*IHFVQCISVQLKLHRRVYLNFPFLEYTRCLQLAGSQSLAAQNAHKHALH 526
Query: 303 H*TKARPXSS*RTALHTTKMEATR*LEQKLAQTK**MSXTPSK*ATADH 449
*++ARP S+*+T TK A + L+Q+ A+T+** S TPSK*A ADH
Sbjct: 527 R*SRARPTSN*KTVFRKTKKGAIQLLQQR*ARTE**TSTTPSK*AIADH 673
>gb|CA024250.1|CA024250 HZ48M15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48M15
5-PRIME, mRNA sequence
Length = 333
Score = 186 bits (400), Expect = 2e-046
Identities = 75/93 (80%), Positives = 80/93 (86%)
Frame = -3 / +2
Query: 591 GRAGSKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXS 412
G + +MGSGSFLKVLA NFDVLAGPL+SLAYPLYASVRAIETK+ VDDQQWLTYWV S
Sbjct: 53 GGSXREMGSGSFLKVLAKNFDVLAGPLVSLAYPLYASVRAIETKSQVDDQQWLTYWVLYS 232
Query: 411 FITLFELTFAPIIEWLPFWSYAKLFFNCXLVLP 313
FITLFELT API+EWLPFW Y KL FNC LV P
Sbjct: 233 FITLFELTXAPILEWLPFWPYGKLXFNCWLVFP 331
Score = 144 bits (310), Expect = 4e-034
Identities = 69/83 (83%), Positives = 70/83 (84%)
Frame = +2 / -1
Query: 311 QGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTGFFVSIALTEAY 490
QGKT QLK SF QNGSHS IGAKVSSNKVINE TQ*VSHC*SST FVSIALTEAY
Sbjct: 333 QGKTSQQLKXSFP*GQNGSHSSIGAKVSSNKVINEYSTQ*VSHC*SST*DFVSIALTEAY 154
Query: 491 RG*ASDMSGPARTSKLLASTLRK 559
RG*AS+ SGPARTSK LASTLRK
Sbjct: 153 RG*ASETSGPARTSKFLASTLRK 85
Score = 112 bits (240), Expect = 2e-024
Identities = 50/89 (56%), Positives = 59/89 (66%)
Frame = +1 / -3
Query: 313 RQDQXAVKEQLCIRPKWKPLDNWSKS*LKQSDK*VXHPVSEPLLIIYRIFCLYXXXXXXX 492
R+D AV+ Q I P+WKP S S LKQSDK V HPVS+PLLIIY FC
Sbjct: 331 RKD*PAVEXQFSIGPEWKPFKYRSXSELKQSDKRVQHPVSKPLLIIYLRFCFNCSHRGI* 152
Query: 493 XXXK*YEWPGKDIEVIGQHLEERSGPHLA 579
K +WPG+D+EV+GQHLEERSGPHL+
Sbjct: 151 RISKRNQWPGEDVEVLGQHLEERSGPHLS 65
Score = 109 bits (232), Expect = 2e-023
Identities = 57/99 (57%), Positives = 63/99 (63%)
Frame = +3 / -2
Query: 312 KARPXSS*RTALHTTKMEATR*LEQKLAQTK**MSXTPSK*ATADHLQDFLSL*L*QKHI 491
K R SS* T H +MEA + E K AQTK** S PSK*A ADHL + L L Q+HI
Sbjct: 332 KERLASS*XTVFHRARMEAIQVSEXK*AQTK**TSTAPSK*AIADHLLEILFQLLSQRHI 153
Query: 492 EDKQVI*VARQGHRSYWPAP*GKIRTPSCSLLFLQ*NRT 608
EDKQ VAR+G RS WPAP*GKIRTPS L R+
Sbjct: 152 EDKQAKPVARRGRRSSWPAP*GKIRTPSLXXTLLSSTRS 36
Score = 102 bits (217), Expect = 3e-021
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = -2 / +1
Query: 592 RKSREQDGVRIFPQGAGQ*LRCPCRATHITCLSSICFC*SYRDKKSCR*SAVAHLLGVXL 413
R+ +DGVRIFPQGAGQ LR P RAT CLSSIC C S +K S R*SA+A+LLG L
Sbjct: 52 RRVXXRDGVRIFPQGAGQELRRPRRATGFACLSSICLCESN*NKISSR*SAMAYLLGAVL 231
Query: 412 IYHFV*ANFCSNYRVASI 359
+YHFV*A+F S+ +ASI
Sbjct: 232 VYHFV*AHFXSDT*MASI 285
>gb|BF623807.2|BF623807 HVSMEa0007B05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0007B05f, mRNA sequence
Length = 496
Score = 118 bits (252), Expect = 4e-026
Identities = 48/116 (41%), Positives = 65/116 (56%)
Frame = -3 / +1
Query: 588 RAGSKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSF 409
RA S L + + LAGP + L YPLYASV+A+E+ + +DD+QWL YW+ SF
Sbjct: 88 RAAEAEEKMSKLWTILTHLHTLAGPGVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSF 267
Query: 408 ITLFELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVN 241
+TL E+ +I W+P W KL F L LP F G A++YD F R + N
Sbjct: 268 VTLVEMVLESLIYWIPIWYELKLLFLAWLALPNFRGAAFIYDRFVREQLRKHGLTN 435
>gb|BM816042.1|BM816042 HC110A01_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC110A01_T3.ab1 similar to (AF290892) AtHVA22e
[Arabidopsis thaliana],abscisic acid-induced protein
HVA22 (L19119) A22 [Hordeum vulgare],gene_id:MFB16.12
pir|T05517 similar to unknown protein [Arabidopsis
thaliana], mRNA sequence
Length = 821
Score = 118 bits (252), Expect = 4e-026
Identities = 48/116 (41%), Positives = 65/116 (56%)
Frame = -3 / +3
Query: 588 RAGSKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSF 409
RA S L + + LAGP + L YPLYASV+A+E+ + +DD+QWL YW+ SF
Sbjct: 108 RAAEAEEKMSKLWTILTHLHTLAGPGVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSF 287
Query: 408 ITLFELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVN 241
+TL E+ +I W+P W KL F L LP F G A++YD F R + N
Sbjct: 288 VTLVEMVLESLIYWIPIWYELKLLFLAWLALPNFRGAAFIYDRFVREQLRKHGLTN 455
>gb|BQ768743.1|BQ768743 EBro08_SQ012_F15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_F15 5', mRNA sequence
Length = 622
Score = 118 bits (252), Expect = 4e-026
Identities = 48/116 (41%), Positives = 65/116 (56%)
Frame = -3 / +3
Query: 588 RAGSKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSF 409
RA S L + + LAGP + L YPLYASV+A+E+ + +DD+QWL YW+ SF
Sbjct: 90 RAAEAEEKMSKLWTILTHLHTLAGPGVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSF 269
Query: 408 ITLFELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQIVN 241
+TL E+ +I W+P W KL F L LP F G A++YD F R + N
Sbjct: 270 VTLVEMVLESLIYWIPIWYELKLLFLAWLALPNFRGAAFIYDRFVREQLRKHGLTN 437
>gb|BI952411.1|BI952411 HVSMEm0006F13f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0006F13f, mRNA sequence
Length = 780
Score = 115 bits (245), Expect = 4e-025
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = -3 / +2
Query: 546 LANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEW 367
L + +AGP I+L YPLYASV A+E+ + VDD+QWL YW+ SFITL E+ P++ W
Sbjct: 176 LLTHLHSVAGPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVAEPVLYW 355
Query: 366 LPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
+P W KL F L LP F G +++YD R
Sbjct: 356 IPVWYPVKLLFVAWLALPQFKGASFIYDKVVR 451
>gb|BQ466175.1|BQ466175 HT01M19T HT Hordeum vulgare subsp. vulgare cDNA clone HT01M19
5-PRIME, mRNA sequence
Length = 646
Score = 115 bits (245), Expect = 4e-025
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = -3 / +2
Query: 546 LANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEW 367
L + +AGP I+L YPLYASV A+E+ + VDD+QWL YW+ SFITL E+ P++ W
Sbjct: 143 LLTHLHSVAGPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVAEPVLYW 322
Query: 366 LPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
+P W KL F L LP F G +++YD R
Sbjct: 323 IPVWYPVKLLFVAWLALPQFKGASFIYDKVVR 418
>gb|BM368471.2|BM368471 EBem08_SQ002_G11_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ002_G11 5', mRNA sequence
Length = 508
Score = 115 bits (245), Expect = 4e-025
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 546 LANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEW 367
L + +AGP I+L YPLYASV A+E+ + VDD+QWL YW+ SFITL E+ P++ W
Sbjct: 135 LLTHLHSVAGPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVAEPVLYW 314
Query: 366 LPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
+P W KL F L LP F G +++YD R
Sbjct: 315 IPVWYPVKLLFVAWLALPQFKGASFIYDKVVR 410
>gb|BM368765.2|BM368765 EBem08_SQ004_I17_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ004_I17 5', mRNA sequence
Length = 499
Score = 115 bits (245), Expect = 4e-025
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = -3 / +2
Query: 546 LANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEW 367
L + +AGP I+L YPLYASV A+E+ + VDD+QWL YW+ SFITL E+ P++ W
Sbjct: 173 LLTHLHSVAGPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVAEPVLYW 352
Query: 366 LPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
+P W KL F L LP F G +++YD R
Sbjct: 353 IPVWYPVKLLFVAWLALPQFKGASFIYDKVVR 448
>gb|BU985299.1|BU985299 HF06L17r HF Hordeum vulgare subsp. vulgare cDNA clone HF06L17
5-PRIME, mRNA sequence
Length = 552
Score = 115 bits (245), Expect = 4e-025
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 546 LANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEW 367
L + +AGP I+L YPLYASV A+E+ + VDD+QWL YW+ SFITL E+ P++ W
Sbjct: 195 LLTHLHSVAGPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVAEPVLYW 374
Query: 366 LPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
+P W KL F L LP F G +++YD R
Sbjct: 375 IPVWYPVKLLFVAWLALPQFKGASFIYDKVVR 470
>gb|BU985771.1|BU985771 HF08J06r HF Hordeum vulgare subsp. vulgare cDNA clone HF08J06
5-PRIME, mRNA sequence
Length = 535
Score = 115 bits (245), Expect = 4e-025
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 546 LANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEW 367
L + +AGP I+L YPLYASV A+E+ + VDD+QWL YW+ SFITL E+ P++ W
Sbjct: 195 LLTHLHSVAGPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVAEPVLYW 374
Query: 366 LPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
+P W KL F L LP F G +++YD R
Sbjct: 375 IPVWYPVKLLFVAWLALPQFKGASFIYDKVVR 470
>gb|BU997629.1|BU997629 HI08I18r HI Hordeum vulgare subsp. vulgare cDNA clone HI08I18
5-PRIME, mRNA sequence
Length = 621
Score = 115 bits (245), Expect = 4e-025
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = -3 / +3
Query: 546 LANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEW 367
L + +AGP I+L YPLYASV A+E+ + VDD+QWL YW+ SFITL E+ P++ W
Sbjct: 183 LLTHLHSVAGPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVAEPVLYW 362
Query: 366 LPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
+P W KL F L LP F G +++YD R
Sbjct: 363 IPVWYPVKLLFVAWLALPQFKGASFIYDKVVR 458
>gb|CA012015.1|CA012015 HT04D03r HT Hordeum vulgare subsp. vulgare cDNA clone HT04D03
5-PRIME, mRNA sequence
Length = 563
Score = 115 bits (245), Expect = 4e-025
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = -3 / +1
Query: 546 LANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEW 367
L + +AGP I+L YPLYASV A+E+ + VDD+QWL YW+ SFITL E+ P++ W
Sbjct: 145 LLTHLHSVAGPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVAEPVLYW 324
Query: 366 LPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
+P W KL F L LP F G +++YD R
Sbjct: 325 IPVWYPVKLLFVAWLALPQFKGASFIYDKVVR 420
>gb|CA012540.1|CA012540 HT05L12r HT Hordeum vulgare subsp. vulgare cDNA clone HT05L12
5-PRIME, mRNA sequence
Length = 537
Score = 115 bits (245), Expect = 4e-025
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = -3 / +1
Query: 546 LANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEW 367
L + +AGP I+L YPLYASV A+E+ + VDD+QWL YW+ SFITL E+ P++ W
Sbjct: 184 LLTHLHSVAGPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVAEPVLYW 363
Query: 366 LPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
+P W KL F L LP F G +++YD R
Sbjct: 364 IPVWYPVKLLFVAWLALPQFKGASFIYDKVVR 459
>gb|CB858860.1|CB858860 HI08I18w HI Hordeum vulgare subsp. vulgare cDNA clone HI08I18
3-PRIME, mRNA sequence
Length = 589
Score = 115 bits (245), Expect = 4e-025
Identities = 44/92 (47%), Positives = 59/92 (64%)
Frame = -3 / -1
Query: 546 LANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEW 367
L + +AGP I+L YPLYASV A+E+ + VDD+QWL YW+ SFITL E+ P++ W
Sbjct: 535 LLTHLHSVAGPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVAEPVLYW 356
Query: 366 LPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
+P W KL F L LP F G +++YD R
Sbjct: 355 IPVWYPVKLLFVAWLALPQFKGASFIYDKVVR 260
>gb|CA011445.1|CA011445 HT05L12u HT Hordeum vulgare subsp. vulgare cDNA clone HT05L12
3-PRIME, mRNA sequence
Length = 550
Score = 114 bits (244), Expect = 6e-025
Identities = 43/85 (50%), Positives = 57/85 (67%)
Frame = -3 / -3
Query: 525 LAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYA 346
+AGP I+L YPLYASV A+E+ + VDD+QWL YW+ SFITL E+ P++ W+P W
Sbjct: 512 VAGPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVAEPVLYWIPVWYPV 333
Query: 345 KLFFNCXLVLPWFNGXAYVYDHFXR 271
KL F L LP F G +++YD R
Sbjct: 332 KLLFVAWLALPQFKGASFIYDKVVR 258
>gb|BM816057.1|BM816057 HC03F05_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC03F05_T3.ab1 similar to (AF290892) AtHVA22e
[Arabidopsis thaliana],abscisic acid-induced protein
HVA22 (L19119) A22 [Hordeum vulgare], mRNA sequence
Length = 872
Score = 112 bits (239), Expect = 3e-024
Identities = 44/104 (42%), Positives = 61/104 (58%)
Frame = -3 / +3
Query: 588 RAGSKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSF 409
RA S L + + LAGP + L YPLYASV+A+E+ + +DD+QWL YW+ SF
Sbjct: 48 RAAEAEEKMSKLWTILTHLHTLAGPGVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSF 227
Query: 408 ITLFELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHF 277
+TL E+ +I W+P W KL F L LP + G ++YD F
Sbjct: 228 VTLVEMVLESLIYWIPIWYELKLLFLAWLALPNYRGAGFIYDRF 359
>gb|BQ459902.1|BQ459902 HA07M09r HA Hordeum vulgare subsp. vulgare cDNA clone HA07M09
5-PRIME, mRNA sequence
Length = 647
Score = 111 bits (238), Expect = 4e-024
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = -3 / +1
Query: 525 LAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYA 346
+AGP ++L YPLYAS+ A+E+ + +DD QWL YW+ SFI LFE+ ++ W+P W
Sbjct: 94 IAGPSLTLVYPLYASICAMESTSKLDDGQWLAYWIIYSFIALFEMAAEQVLYWIPLWYEV 273
Query: 345 KLFFNCXLVLPWFNGXAYVYDHFXR 271
KL F LVLP F G +++Y+ F R
Sbjct: 274 KLLFVAWLVLPQFRGASFIYEKFVR 348
>gb|BU996496.1|BU996496 HM13M20r HM Hordeum vulgare subsp. vulgare cDNA clone HM13M20
5-PRIME, mRNA sequence
Length = 645
Score = 110 bits (235), Expect = 1e-023
Identities = 43/88 (48%), Positives = 56/88 (63%)
Frame = -3 / +2
Query: 534 FDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFW 355
F L P I+L YPLYASV A+E+ + VDD+QWL YW+ SFITL E+ P++ W+P W
Sbjct: 62 FVSLRRPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVAEPVLYWIPVW 241
Query: 354 SYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
KL F L LP F G +++YD R
Sbjct: 242 YPVKLLFVAWLALPQFKGASFIYDKVVR 325
>gb|BU996712.1|BU996712 HM14H24r HM Hordeum vulgare subsp. vulgare cDNA clone HM14H24
5-PRIME, mRNA sequence
Length = 587
Score = 110 bits (235), Expect = 1e-023
Identities = 43/88 (48%), Positives = 56/88 (63%)
Frame = -3 / +2
Query: 534 FDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFW 355
F L P I+L YPLYASV A+E+ + VDD+QWL YW+ SFITL E+ P++ W+P W
Sbjct: 68 FVSLRRPSITLLYPLYASVCAMESPSKVDDEQWLAYWILYSFITLLEMVAEPVLYWIPVW 247
Query: 354 SYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
KL F L LP F G +++YD R
Sbjct: 248 YPVKLLFVAWLALPQFKGASFIYDKVVR 331
>gb|CA004284.1|CA004284 HS17C06r HS Hordeum vulgare subsp. vulgare cDNA clone HS17C06
5-PRIME, mRNA sequence
Length = 310
Score = 105 bits (223), Expect = 4e-022
Identities = 41/57 (71%), Positives = 49/57 (85%)
Frame = -3 / +2
Query: 606 FCSTAGRAGSKMGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQW 436
F ++ R +MGSGSFLKVL +N DVLAGP++SLAYPLYASVRAIETK+P+DDQQW
Sbjct: 140 FAASGERIAGQMGSGSFLKVLVSNLDVLAGPIVSLAYPLYASVRAIETKSPIDDQQW 310
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 316,086,046
Number of Sequences: 312970
Number of extensions: 5309644
Number of successful extensions: 103523
Number of sequences better than 1.0e-020: 42
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 9347030058
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)