TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2922138.2.1
(1095 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF621527.1|BF621527 HVSMEa0011E23f Hordeum vulgare seedl... 412 e-114
gb|BM816845.1|BM816845 HB105B04_SK.ab1 HB Hordeum vulgare s... 406 e-112
gb|BQ739853.1|BQ739853 HB04A05 HB Hordeum vulgare subsp. vu... 380 e-104
gb|CA012646.1|CA012646 HT06A10r HT Hordeum vulgare subsp. v... 380 e-104
gb|BE214410.3|BE214410 HV_CEb0003G01f Hordeum vulgare seedl... 259 e-101
gb|AV933386.1|AV933386 AV933386 K. Sato unpublished cDNA li... 363 e-099
gb|AV933542.1|AV933542 AV933542 K. Sato unpublished cDNA li... 357 8e-098
gb|BF260055.2|BF260055 HVSMEf0020P20f Hordeum vulgare seedl... 341 8e-094
gb|BF621761.2|BF621761 HVSMEa0012H13f Hordeum vulgare seedl... 334 2e-091
gb|AV915236.1|AV915236 AV915236 K. Sato unpublished cDNA li... 332 2e-090
gb|AV934062.1|AV934062 AV934062 K. Sato unpublished cDNA li... 330 1e-089
gb|BF258180.2|BF258180 HVSMEf0015A11f Hordeum vulgare seedl... 310 7e-084
gb|BM375339.2|BM375339 EBem06_SQ003_A21_R embryo, 21 DPA, n... 303 1e-081
gb|AV934980.1|AV934980 AV934980 K. Sato unpublished cDNA li... 298 3e-080
gb|BJ476097.1|BJ476097 BJ476097 K. Sato unpublished cDNA li... 298 3e-080
gb|BQ467934.1|BQ467934 HR01G10r HR Hordeum vulgare subsp. v... 292 3e-078
gb|AV932136.1|AV932136 AV932136 K. Sato unpublished cDNA li... 290 1e-077
gb|BJ472055.1|BJ472055 BJ472055 K. Sato unpublished cDNA li... 290 1e-077
gb|BE214395.2|BE214395 HV_CEb0003F06f Hordeum vulgare seedl... 289 2e-077
gb|AV919848.1|AV919848 AV919848 K. Sato unpublished cDNA li... 287 6e-077
gb|AV932651.1|AV932651 AV932651 K. Sato unpublished cDNA li... 286 1e-076
gb|BQ464865.1|BQ464865 HU01O19T HU Hordeum vulgare subsp. v... 284 7e-076
gb|AV935828.1|AV935828 AV935828 K. Sato unpublished cDNA li... 265 3e-070
gb|AV914749.1|AV914749 AV914749 K. Sato unpublished cDNA li... 255 3e-067
gb|BG300031.1|BG300031 HVSMEb0011B11f Hordeum vulgare seedl... 247 1e-064
gb|BE602191.1|BE602191 HVSMEh0102O23f Hordeum vulgare 5-45 ... 241 5e-063
gb|BU996421.1|BU996421 HM13I21r HM Hordeum vulgare subsp. v... 240 1e-062
gb|AV932602.1|AV932602 AV932602 K. Sato unpublished cDNA li... 239 2e-062
gb|AV921854.1|AV921854 AV921854 K. Sato unpublished cDNA li... 234 6e-061
gb|AV936314.1|AV936314 AV936314 K. Sato unpublished cDNA li... 234 6e-061
gb|BQ663284.1|BQ663284 HU01O19w HU Hordeum vulgare subsp. v... 234 6e-061
gb|CV059100.1|CV059100 BNEL44d1 Barley EST endosperm librar... 160 1e-060
gb|AV935981.1|AV935981 AV935981 K. Sato unpublished cDNA li... 229 3e-059
gb|BQ471903.1|BQ471903 HV03N05r HV Hordeum vulgare subsp. v... 219 2e-056
gb|CA020312.1|CA020312 HV14O23r HV Hordeum vulgare subsp. v... 215 3e-055
gb|BJ475625.1|BJ475625 BJ475625 K. Sato unpublished cDNA li... 193 4e-052
gb|BG309950.2|BG309950 HVSMEc0015F24f Hordeum vulgare seedl... 198 4e-050
gb|AJ432736.1|AJ432736 AJ432736 S00002 Hordeum vulgare subs... 196 2e-049
gb|CA011285.1|CA011285 HT06A10u HT Hordeum vulgare subsp. v... 187 1e-046
gb|BJ460652.1|BJ460652 BJ460652 K. Sato unpublished cDNA li... 184 8e-046
gb|CA017090.1|CA017090 HV14O23u HV Hordeum vulgare subsp. v... 176 3e-043
gb|BQ662063.1|BQ662063 HR01G10u HR Hordeum vulgare subsp. v... 173 1e-042
gb|BF629242.2|BF629242 HVSMEb0010H15f Hordeum vulgare seedl... 113 2e-042
gb|BF629559.3|BF629559 HVSMEb0013F09f Hordeum vulgare seedl... 171 6e-042
gb|BG365950.2|BG365950 HVSMEi0005H10f Hordeum vulgare 20 DA... 169 3e-041
gb|CV062009.1|CV062009 BNEL75d1 Barley EST endosperm librar... 168 6e-041
gb|CK122919.1|CK122919 BES1824101e05 BES1824 Hordeum vulgar... 157 8e-038
gb|BG367058.2|BG367058 HVSMEi0009P21f Hordeum vulgare 20 DA... 150 1e-035
gb|AV912065.1|AV912065 AV912065 K. Sato unpublished cDNA li... 145 4e-034
gb|AV937218.1|AV937218 AV937218 K. Sato unpublished cDNA li... 133 2e-030
gb|BJ471674.1|BJ471674 BJ471674 K. Sato unpublished cDNA li... 133 2e-030
gb|BJ472311.1|BJ472311 BJ472311 K. Sato unpublished cDNA li... 133 2e-030
gb|BJ474280.1|BJ474280 BJ474280 K. Sato unpublished cDNA li... 133 2e-030
gb|BJ476305.1|BJ476305 BJ476305 K. Sato unpublished cDNA li... 133 2e-030
gb|BG300201.1|BG300201 HVSMEb0010O04f Hordeum vulgare seedl... 98 2e-030
gb|BI955576.1|BI955576 HVSMEm0023K04f Hordeum vulgare green... 101 1e-029
gb|BF254292.2|BF254292 HVSMEf0003J01f Hordeum vulgare seedl... 102 2e-024
gb|AL501651.1|AL501651 AL501651 Hordeum vulgare Barke roots... 67 5e-024
gb|BF260543.3|BF260543 HVSMEf0022E15f Hordeum vulgare seedl... 107 9e-023
gb|BI778924.2|BI778924 EBro01_SQ002_B06_R root, 3 week, hyd... 98 5e-021
gb|CA021844.1|CA021844 HZ41E21r HZ Hordeum vulgare subsp. v... 98 5e-021
>gb|BF621527.1|BF621527 HVSMEa0011E23f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011E23f, mRNA sequence
Length = 844
Score = 412 bits (894), Expect = e-114
Identities = 165/227 (72%), Positives = 188/227 (82%)
Frame = +3 / +1
Query: 90 PPRVHDPRERERGRMASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLV 269
PP +P GRMA+ QCC +PP LNPA G+GKVVDSFGG+ AYV+G +SKAAVVL+
Sbjct: 37 PPVPREPAASALGRMATPQCCADPPTLNPAGGEGKVVDSFGGITAYVSGARESKAAVVLI 216
Query: 270 ADVFGFEAPIMRNIADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEE 449
+DVFGFEAP +R IADKVASSGY VVVPDF HGDPY PEN ++P VW+K H P K FEE
Sbjct: 217 SDVFGFEAPNLRKIADKVASSGYLVVVPDFLHGDPYVPENADRPIQVWLKEHAPGKAFEE 396
Query: 450 TKQVIGALKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAI 629
K VI ALKE+GVS VGAAGYCWGAKVV ELAKA+EI AAV+ HPSFVTV+DIKEVKC I
Sbjct: 397 AKPVIAALKEQGVSTVGAAGYCWGAKVVAELAKANEIHAAVMSHPSFVTVEDIKEVKCPI 576
Query: 630 SILGAEIDKMSPPELIKQFEQVLSLNSGVGHFVKIFPGVAHGWSVRY 770
++LGAEIDK SPPEL+KQFEQVLS NSG+ HFVKIFPG +HGW+VRY
Sbjct: 577 AVLGAEIDKTSPPELVKQFEQVLSSNSGIAHFVKIFPGGSHGWTVRY 717
Score = 298 bits (645), Expect = 4e-080
Identities = 143/253 (56%), Positives = 156/253 (61%)
Frame = -3 / -3
Query: 847 RFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKERTCSNCXXXX 668
RFLL S S LYLT+HP PG ILTK PE ++RTCSNC
Sbjct: 794 RFLLTSSIQCAGLSQAFFPAPASSLLYLTVHP*EPPGNILTK*AIPELEDRTCSNCLTNS 615
Query: 667 XXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAPTAD 488
SAP + H TSLISSTVTKEGC+ TAAWIS AFA+S TTFAPQQ PAAPT D
Sbjct: 614 GGDVLSISAPSTAMGHFTSLISSTVTKEGCDITAAWISLAFASSATTFAPQQ*PAAPTVD 435
Query: 487 TPFSFRAPITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAM 308
TP S RA IT F SSN F G C F HT G S F GTTTKYPDEATLSA+
Sbjct: 434 TPCSLRAAITGFASSNAFPGACSFNHTCIGLSAFSGTYGSPCKKSGTTTKYPDEATLSAI 255
Query: 307 FLIIGASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAIR 128
FL GASNPKTS RTTAAL+S P T A+ PPKLSTTLP P AG GG +QH +AI
Sbjct: 254 FLRFGASNPKTSEMRTTAALDSRAPETYAVIPPKLSTTLPSPPAGLSVGGSAQHCGVAIL 75
Query: 127 PLSLSLGSWTRGG 89
P + + GS GG
Sbjct: 74 PSAEAAGSLGTGG 36
Score = 111 bits (236), Expect(2) = 3e-049
Identities = 54/114 (47%), Positives = 68/114 (59%)
Frame = -2 / -2
Query: 845 ILVEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQRKXXXXXXXXLR 666
+L + + + F S L CV VSH+PSMR RE LD+V+NP*V+ +
Sbjct: 792 VLAYQFDPMCRAFSSILPSPCVFTFVSHSPSMRTPREYLDKVSNP*VRGQNLLELLDQFW 613
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WG FVN SS+ A LFDI N NKRRV +S +DL+SF L N+LCTPAI C
Sbjct: 612 WGCFVNFSSKYSYGAFHLFDIFNSNKRRV*HNSCMDLISFR*LSNHLCTPAITC 451
Score = 105 bits (223), Expect(2) = 3e-049
Identities = 51/105 (48%), Positives = 62/105 (59%)
Frame = -2 / -2
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH + + R I IPM EIW+HN + RS+F+GY+P RRF+ EDVG+
Sbjct: 393 FKCFSRGMLL*PHLYWSVGVFRYIWIPM*EIWHHN*ISRRSDFIGYLPQIRRFKPEDVGD 214
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E +PAEAV DLAL AG V+ RV AALR H
Sbjct: 213 EDDGGLGLSGAGDVRRDPAEAVHDLALAAGGVERRRVRAALRGSH 79
Score = 89.0 bits (188), Expect(2) = 2e-034
Identities = 40/72 (55%), Positives = 48/72 (66%)
Frame = +2 / +3
Query: 557 DPGCCAVAPFFCYR*RYQRGQVRNFYPRS*D*QNVPTGANQAVRAGPFFELRGWPLRQDL 736
DP C V PFFCY *RYQRG++ + S*+*QN+PT QAVRAG LR L QD+
Sbjct: 504 DPCSCYVTPFFCYC*RYQRGEMPHSCTWS*N*QNIPTRIGQAVRAGSVL*LRDCSLCQDI 683
Query: 737 PWCGAWMEREIQ 772
PW +WM+ EIQ
Sbjct: 684 PWGFSWMDCEIQ 719
Score = 77.1 bits (162), Expect(2) = 2e-034
Identities = 35/73 (47%), Positives = 45/73 (61%)
Frame = +2 / +3
Query: 290 SADYEEHSRQSCFVRVLCCGTRFLSWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWG 469
SA+ EE SR S FV + CG RFL+WGS+CT*+ + + V K GK +*R KT Y
Sbjct: 237 SAESEEDSR*SRFVWIFSCGARFLTWGSICT*KRRQTNTSVVKGACPGKSI*RGKTCYCC 416
Query: 470 SKGEGSVCCWSCR 508
S+ S+ CW CR
Sbjct: 417 SQRTRSIYCWGCR 455
Score = 65.7 bits (137), Expect(2) = 7e-023
Identities = 46/104 (44%), Positives = 50/104 (48%)
Frame = +1 / +2
Query: 505 QGIAGVQRLLWSWQKLMRSRXXXXXXXXXXXXXISKRSSAQFLSSELRLTKCPHXXXXXX 684
Q IAGVQR L S +KLMRS ISKR +A L EL+LTK PH
Sbjct: 452 QVIAGVQRWLLS*RKLMRSMQLLCHTLLLLLLKISKR*NAP*LYLELKLTKHPHQNWSSS 631
Query: 685 XXXXFL*TQGLATSSRSSLVWRMDGA*DXXXXXQLP*RVLRKPL 816
TQGL T SR SL MDG *D Q R+L K L
Sbjct: 632 SSRFCPLTQGLLTLSRYSLGVLMDGL*DTKVKTQGLGRMLEKAL 763
Score = 65.7 bits (137), Expect(3) = 3e-028
Identities = 37/74 (50%), Positives = 45/74 (60%)
Frame = -1 / -1
Query: 858 EFISDSC*TSRACPQRLPQHSSRQLRRRGCISRSIHAPHQGRS*RSGQPLSSKKGPARTA 679
+F SC R+ Q +HSS+ LR CIS+SIH QG S*+S Q LS + PARTA
Sbjct: 805 KFHVGSCLPVRSNVQGFLKHSSQPLRLHFCISQSIHENPQGIS*QSEQSLS*RTEPARTA 626
Query: 678 *LAPVGTFCQSQLR 637
* VG FCQ QL+
Sbjct: 625 *PILVGMFCQFQLQ 584
Score = 62.0 bits (129), Expect(2) = 7e-023
Identities = 30/56 (53%), Positives = 37/56 (66%)
Frame = +1 / +2
Query: 289 KRRL*GT*PTKLLRQGTLLWYQISFMGILMHLRMLRSPFLCG*SHILRKKGLKRQN 456
KRR+*G *P K LR LW QIS+MGI M+L+ + CG* + R+K LKRQN
Sbjct: 236 KRRI*GR*PIKSLRLDI*LWCQISYMGIHMYLKTPTDQYKCG*RSMPREKHLKRQN 403
Score = 49.6 bits (102), Expect(3) = 3e-028
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = -1 / -1
Query: 456 VLSLQTLFPEYVTLSTQERASQHSQVHKDPHERNLVPQQSTLTKQ 322
VL LQ LFP + L+T + QVH DPH RNL PQ + TK+
Sbjct: 403 VLPLQMLFPGHAPLTTLVLVCRRFQVHMDPHVRNLAPQLNIQTKR 269
Score = 48.3 bits (99), Expect(3) = 3e-028
Identities = 23/35 (65%), Positives = 24/35 (68%)
Frame = -1 / -1
Query: 615 PL*YRQR*QKKGATAQQPGSHELLPTPQQPLHPSN 511
PL*Y Q+*QKKG T Q GSH L Q PLHPSN
Sbjct: 562 PL*YLQQ*QKKGVT*QLHGSH*LSLAQQPPLHPSN 458
>gb|BM816845.1|BM816845 HB105B04_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB105B04_SK.ab1 similar to (AF370531) Unknown protein
[Arabidopsis thaliana], mRNA sequence
Length = 887
Score = 406 bits (881), Expect = e-112
Identities = 164/237 (69%), Positives = 188/237 (79%)
Frame = +3 / +2
Query: 132 MASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNI 311
MAS QCC NPP LNPA G+GKVVDSFGG+KAYVAG ++SKAAVVL++DVFGF AP +R I
Sbjct: 83 MASPQCCANPPTLNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAPNLRKI 262
Query: 312 ADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVS 491
ADKVA+SGYFVVVPDF HGDPY PE+ ++P VWIK HT K FEE K VI ALKE+G S
Sbjct: 263 ADKVAASGYFVVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGAS 442
Query: 492 AVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSPPE 671
+VGAAGYCWGAKVV ELAKA+EIQ AV+ HPSFVTVDDIKEVKC I++LGAE D MSPPE
Sbjct: 443 SVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSPPE 622
Query: 672 LIKQFEQVLSLNSGVGHFVKIFPGVAHGWSVRYNHXXXXXXXXXXXXXXXMLDWFNK 842
L+K+FEQVLS NSG+ H VKIFPGV+HGW+V M+DW N+
Sbjct: 623 LVKEFEQVLSSNSGIAHXVKIFPGVSHGWTVXIYGEXAAAVKSAEGALTDMIDWVNR 793
Score = 276 bits (597), Expect = 2e-073
Identities = 135/237 (56%), Positives = 143/237 (60%)
Frame = -3 / -3
Query: 841 LLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKERTCSNCXXXXXX 662
LL QS M S LT+HP TPGKILT PE +RTCSN
Sbjct: 792 LLTQSIMSVRAPSALFTAAAXSPYXLTVHP*ETPGKILTX*AIPELDDRTCSNSLTNSGG 613
Query: 661 XXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAPTADTP 482
SAP + H TS ISSTVTKEGC+ TA WIS AFANS TTFAPQQ PAAPT D P
Sbjct: 612 DITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSATTFAPQQ*PAAPTLDAP 433
Query: 481 FSFRAPITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFL 302
SFRA IT F SSN F VC IHT G S GTTTKYPD ATLSA+FL
Sbjct: 432 CSFRAAITGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFL 253
Query: 301 IIGASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAI 131
GA NPKTS RTTAAL+S PAT AL PPKLSTTLP P AG GG +QH LA+
Sbjct: 252 RFGAPNPKTSEMRTTAALDSWAPATYALIPPKLSTTLPSPAAGLSVGGFAQHCGLAM 82
Score = 107 bits (229), Expect(3) = 1e-046
Identities = 52/105 (49%), Positives = 65/105 (61%)
Frame = -2 / -2
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH +++ R I IPM+EIW+HN++ RSNF+GY+P RR + EDVG+
Sbjct: 397 FKCFSRGMLLDPHCYWSVSVFRYIWIPMQEIWHHNEISRRSNFIGYLPQIRRSKPEDVGD 218
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E L+PAEAVDDLAL G V+ V AALRA H
Sbjct: 217 ENYGGLGLLGAGDVRLDPAEAVDDLALAGGGVERRWVRAALRASH 83
Score = 90.0 bits (190), Expect(2) = 3e-032
Identities = 40/73 (54%), Positives = 47/73 (64%)
Frame = +2 / +1
Query: 290 SADYEEHSRQSCFVRVLCCGTRFLSWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWG 469
SA+ EE SR SC V + CG RFL+WGS+CT* *+ S VD+ Y GK +*R K Y
Sbjct: 241 SAESEEDSR*SCCVWIFRCGARFLAWGSICT*RR*QTNSSVDQGAYRGKSI*RGKACYRC 420
Query: 470 SKGEGSVCCWSCR 508
SKG SV CW CR
Sbjct: 421 SKGTRSV*CWGCR 459
Score = 87.7 bits (185), Expect(2) = 2e-026
Identities = 53/110 (48%), Positives = 64/110 (58%)
Frame = -1 / -1
Query: 840 C*TSRACPQRLPQHSSRQLRRRGCISRSIHAPHQGRS*RSGQPLSSKKGPARTA*LAPVG 661
C* S++C LP+ S +Q R SRSIH QGRS* S Q LS PART * VG
Sbjct: 791 C*PSQSCLSGLPRRSLQQPHXRHIXSRSIHEKPQGRS*XSEQSLS*MIEPARTP*PILVG 612
Query: 660 TFCQSQLRG*KLRT*PL*YRQR*QKKGATAQQPGSHELLPTPQQPLHPSN 511
T Q QL+ + PL Y ++*QKK AT + GSH L T + PLHP+N
Sbjct: 611 TSHQFQLQVQRWGISPLLYHRQ*QKKDAT*RLSGSH*LSLTLRLPLHPNN 462
Score = 69.3 bits (145), Expect(2) = 3e-032
Identities = 48/112 (42%), Positives = 56/112 (50%)
Frame = +1 / +3
Query: 505 QGIAGVQRLLWSWQKLMRSRXXXXXXXXXXXXXISKRSSAQFLSSELRLTKCPHXXXXXX 684
Q I GVQR S +KLMRSR I KR +A L EL+L CPH
Sbjct: 456 QVIVGVQR*SQS*RKLMRSRQPLCRILLLLLSMI*KR*NAPSLYLELKLM*CPHQNWSRS 635
Query: 685 XXXXFL*TQGLATSSRSSLVWRMDGA*DXXXXXQLP*RVLRKPLRTCSTGST 840
+ TQGL T SRSSL + MDG * +L *R R+P +T TG T
Sbjct: 636 SSRFYHLTQGLLTXSRSSLGFLMDGP*XYMAXMRLL*RAPREP*QT*LTGLT 791
Score = 67.5 bits (141), Expect(2) = 2e-022
Identities = 34/70 (48%), Positives = 42/70 (60%)
Frame = +2 / +1
Query: 557 DPGCCAVAPFFCYR*RYQRGQVRNFYPRS*D*QNVPTGANQAVRAGPFFELRGWPLRQDL 736
DP VA FFCY Y+RG++ + S*+* +VPT Q VRAG LR L QDL
Sbjct: 508 DPDSRYVASFFCYCR*YKRGEMPHRCTWS*N*CDVPTRIGQGVRAGSII*LRDCSLCQDL 687
Query: 737 PWCGAWMERE 766
PW +WM+RE
Sbjct: 688 PWGFSWMDRE 717
Score = 61.1 bits (127), Expect(3) = 1e-046
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2 / -2
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 616 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 455
Score = 58.3 bits (121), Expect(2) = 2e-022
Identities = 30/56 (53%), Positives = 36/56 (64%)
Frame = +1 / +3
Query: 289 KRRL*GT*PTKLLRQGTLLWYQISFMGILMHLRMLRSPFLCG*SHILRKKGLKRQN 456
+RR+*G *P KLLR LW QIS MGI M+L+ L CG I R+K LKRQ+
Sbjct: 240 ERRI*GR*PIKLLRLDISLWCQISCMGIHMYLKTLTDQ*QCGSRSIPREKHLKRQS 407
Score = 57.0 bits (118), Expect(3) = 1e-046
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = -2 / -2
Query: 839 VEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQ 702
V PV HV +G L L+ S + H PSMR+ REDLD V+NP*V+
Sbjct: 790 VNPVNHVCQGSLGALYSSRXFAIYXHGPSMRNPREDLDXVSNP*VR 653
Score = 51.9 bits (107), Expect(2) = 2e-026
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -1 / -1
Query: 453 LSLQTLFPEYVTLSTQERASQHSQVHKDPHERNLVPQQSTLTKQ 322
L LQ LFP Y ST Q QVH DPH RNL PQ++ T+Q
Sbjct: 404 LPLQMLFPRYAP*STLLLVCQRLQVHMDPHARNLAPQRNIQTQQ 273
>gb|BQ739853.1|BQ739853 HB04A05 HB Hordeum vulgare subsp. vulgare cDNA clone HB04A05
similar to NP_566732.1| (NM_113263) expressed protein
[Arabidopsis thaliana] gi|9294516|dbj|BAB02778.1|
(AB023036) contains similarity to
endo-1,3-1,4-beta-D-glucanase gene_id:MDB19.8..., mRNA
sequence
Length = 638
Score = 380 bits (823), Expect = e-104
Identities = 153/208 (73%), Positives = 175/208 (84%)
Frame = +3 / +1
Query: 132 MASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNI 311
MAS QCC NPP LNPA G+GKVVDSFGG+KAYVAG ++SKAAVVL++DVFGF AP +R I
Sbjct: 13 MASPQCCANPPTLNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAPNLRKI 192
Query: 312 ADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVS 491
ADKVA+SGYFVVVPDF HGDPY PE+ ++P VWIK HT K FEE K VI ALKE+G S
Sbjct: 193 ADKVAASGYFVVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGAS 372
Query: 492 AVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSPPE 671
+VGAAGYCWGAKVV ELAKA+EIQ AV+ HPSFVTVDDI EVKC I++LG+ D MSPPE
Sbjct: 373 SVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIXEVKCPIAVLGS*TDVMSPPE 552
Query: 672 LIKQFEQVLSLNSGVGHFVKIFPGVAHG 755
L+K+FEQVLS NS + HFVKIFPG +HG
Sbjct: 553 LVKEFEQVLSSNSXIAHFVKIFPGGSHG 636
Score = 261 bits (564), Expect = 6e-069
Identities = 123/209 (58%), Positives = 130/209 (62%)
Frame = -3 / -1
Query: 757 HPCATPGKILTKWPTPEFKERTCSNCXXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGC 578
HP PGKILTK E +RTCSN P + H TS ISSTVTKEGC
Sbjct: 638 HP*EPPGKILTK*AIXELDDRTCSNSLTNSGGDITSVQLPSTAMGHFTSXISSTVTKEGC 459
Query: 577 NSTAAWIS*AFANSTTTFAPQQYPAAPTADTPFSFRAPITCFVSSNPFSGVCDFIHTGKG 398
+ TA WIS AFANS TTFAPQQ PAAPT D P SFRA IT F SSN F VC IHT G
Sbjct: 458 DITAVWISLAFANSATTFAPQQ*PAAPTLDAPCSFRAAITGFASSNAFPAVCSLIHTAIG 279
Query: 397 FSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIGASNPKTSATRTTAALESSGPAT*AL 218
S GTTTKYPD ATLSA+FL GA NPKTS RTTAAL+S PAT AL
Sbjct: 278 LSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYAL 99
Query: 217 SPPKLSTTLPFPQAGFRAGGLSQH*ELAI 131
PPKLSTTLP P AG GG +QH LA+
Sbjct: 98 IPPKLSTTLPSPAAGLSVGGFAQHCGLAM 12
Score = 107 bits (229), Expect(3) = 6e-037
Identities = 52/105 (49%), Positives = 65/105 (61%)
Frame = -2 / -3
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH +++ R I IPM+EIW+HN++ RSNF+GY+P RR + EDVG+
Sbjct: 327 FKCFSRGMLLDPHCYWSVSVFRYIWIPMQEIWHHNEISRRSNFIGYLPQIRRSKPEDVGD 148
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E L+PAEAVDDLAL G V+ V AALRA H
Sbjct: 147 ENYGGLGLLGAGDVRLDPAEAVDDLALAGGGVERRWVRAALRASH 13
Score = 90.0 bits (190), Expect(3) = 2e-025
Identities = 40/73 (54%), Positives = 47/73 (64%)
Frame = +2 / +3
Query: 290 SADYEEHSRQSCFVRVLCCGTRFLSWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWG 469
SA+ EE SR SC V + CG RFL+WGS+CT* *+ S VD+ Y GK +*R K Y
Sbjct: 171 SAESEEDSR*SCCVWIFRCGARFLAWGSICT*RR*QTNSSVDQGAYRGKSI*RGKACYRC 350
Query: 470 SKGEGSVCCWSCR 508
SKG SV CW CR
Sbjct: 351 SKGTRSV*CWGCR 389
Score = 53.8 bits (111), Expect(3) = 6e-037
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = -2 / -3
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WGH ++ + + + A L I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 546 WGHHISSAXKYSDGAFHLXYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 385
Score = 38.2 bits (77), Expect(3) = 2e-025
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +2 / +3
Query: 656 NVPTGANQAVRAGPFFELRGWPLRQDLPWCGAWM 757
+VPT Q VRAG L L QDLPW +WM
Sbjct: 537 DVPTRIGQGVRAGSII*LXDCSLCQDLPWGFSWM 638
Score = 31.3 bits (62), Expect(3) = 6e-037
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 755 SMRHTREDLDEVANP*VQ 702
SMR REDLD+V+NP*V+
Sbjct: 636 SMRTPREDLDKVSNP*VR 583
Score = 25.8 bits (50), Expect(3) = 2e-025
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2 / +3
Query: 557 DPGCCAVAPFFCYR*RYQRGQV 622
DP VA FFCY Y RG++
Sbjct: 438 DPDSRYVASFFCYCR*YXRGEM 503
>gb|CA012646.1|CA012646 HT06A10r HT Hordeum vulgare subsp. vulgare cDNA clone HT06A10
5-PRIME, mRNA sequence
Length = 651
Score = 380 bits (823), Expect = e-104
Identities = 153/202 (75%), Positives = 173/202 (85%)
Frame = +3 / +1
Query: 132 MASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNI 311
MAS QCC NPP LNPA G+GKVVDSFGG+KAYVAG ++SKAAVVL++DVFGF AP +R I
Sbjct: 46 MASPQCCANPPTLNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAPNLRKI 225
Query: 312 ADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVS 491
ADKVA+SGYFVVVPDF HGDPY PE+ ++P VWIK HT K FEE K VI ALKE+G S
Sbjct: 226 ADKVAASGYFVVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGAS 405
Query: 492 AVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSPPE 671
+VGAAGYCWGAKVV ELAKA+EIQ AV+ HPSFVTVDDIKEVKC I++LGAE D MSPPE
Sbjct: 406 SVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSPPE 585
Query: 672 LIKQFEQVLSLNSGVGHFVKIF 737
L+K+FEQVLS NSG+ HFVKIF
Sbjct: 586 LVKEFEQVLSSNSGIAHFVKIF 651
Score = 258 bits (558), Expect = 4e-068
Identities = 122/202 (60%), Positives = 129/202 (63%)
Frame = -3 / -2
Query: 736 KILTKWPTPEFKERTCSNCXXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWI 557
KILTK PE +RTCSN SAP + H TS ISSTVTKEGC+ TA WI
Sbjct: 650 KILTK*AIPELDDRTCSNSLTNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWI 471
Query: 556 S*AFANSTTTFAPQQYPAAPTADTPFSFRAPITCFVSSNPFSGVCDFIHTGKGFSTFXXX 377
S AFANS TTFAPQQ PAAPT D P SFRA IT F SSN F VC IHT G S
Sbjct: 470 SLAFANSATTFAPQQ*PAAPTLDAPCSFRAAITGFASSNAFPAVCSLIHTAIGLSASSGT 291
Query: 376 XXXXXXXXGTTTKYPDEATLSAMFLIIGASNPKTSATRTTAALESSGPAT*ALSPPKLST 197
GTTTKYPD ATLSA+FL GA NPKTS RTTAAL+S PAT AL PPKLST
Sbjct: 290 YGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYALIPPKLST 111
Query: 196 TLPFPQAGFRAGGLSQH*ELAI 131
TLP P AG GG +QH LA+
Sbjct: 110 TLPSPAAGLSVGGFAQHCGLAM 45
Score = 107 bits (229), Expect(3) = 6e-037
Identities = 52/105 (49%), Positives = 65/105 (61%)
Frame = -2 / -1
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH +++ R I IPM+EIW+HN++ RSNF+GY+P RR + EDVG+
Sbjct: 360 FKCFSRGMLLDPHCYWSVSVFRYIWIPMQEIWHHNEISRRSNFIGYLPQIRRSKPEDVGD 181
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E L+PAEAVDDLAL G V+ V AALRA H
Sbjct: 180 ENYGGLGLLGAGDVRLDPAEAVDDLALAGGGVERRWVRAALRASH 46
Score = 90.0 bits (190), Expect(2) = 4e-026
Identities = 40/73 (54%), Positives = 47/73 (64%)
Frame = +2 / +3
Query: 290 SADYEEHSRQSCFVRVLCCGTRFLSWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWG 469
SA+ EE SR SC V + CG RFL+WGS+CT* *+ S VD+ Y GK +*R K Y
Sbjct: 204 SAESEEDSR*SCCVWIFRCGARFLAWGSICT*RR*QTNSSVDQGAYRGKSI*RGKACYRC 383
Query: 470 SKGEGSVCCWSCR 508
SKG SV CW CR
Sbjct: 384 SKGTRSV*CWGCR 422
Score = 61.1 bits (127), Expect(3) = 6e-037
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2 / -1
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 579 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 418
Score = 48.7 bits (100), Expect(2) = 4e-026
Identities = 28/60 (46%), Positives = 34/60 (56%)
Frame = +2 / +3
Query: 557 DPGCCAVAPFFCYR*RYQRGQVRNFYPRS*D*QNVPTGANQAVRAGPFFELRGWPLRQDL 736
DP VA FFCY Y+RG++ + S*+* +VPT Q VRAG LR L QDL
Sbjct: 471 DPDSRYVASFFCYCR*YKRGEMPHRCTWS*N*CDVPTRIGQGVRAGSII*LRDCSLCQDL 650
Score = 24.0 bits (46), Expect(3) = 6e-037
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = -2 / -1
Query: 737 EDLDEVANP*VQ 702
EDLD+V+NP*V+
Sbjct: 651 EDLDKVSNP*VR 616
>gb|BE214410.3|BE214410 HV_CEb0003G01f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003G01f, mRNA sequence
Length = 712
Score = 259 bits (560), Expect(3) = e-101
Identities = 103/140 (73%), Positives = 117/140 (83%)
Frame = +3 / +3
Query: 132 MASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNI 311
MAS QCC NPP LNPA G+GKVVDSFGG+KAYVAG ++SKAAVVL++DVFGF AP +R I
Sbjct: 51 MASPQCCANPPTLNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAPNLRKI 230
Query: 312 ADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVS 491
ADKVA+SGYFVVVPDF HGDPY PE+ ++P VWIK HT K FEE K VI ALKE+G S
Sbjct: 231 ADKVAASGYFVVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGAS 410
Query: 492 AVGAAGYCWGAKVVVELAKA 551
+VGAA YCWGAKVV ELAK+
Sbjct: 411 SVGAASYCWGAKVVAELAKS 470
Score = 182 bits (393), Expect(3) = 1e-062
Identities = 87/139 (62%), Positives = 91/139 (65%)
Frame = -3 / -1
Query: 547 FANSTTTFAPQQYPAAPTADTPFSFRAPITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXX 368
FANS TTFAPQQ AAPT D P SFRA IT F SSN F VC IHT G S
Sbjct: 466 FANSATTFAPQQ*LAAPTLDAPCSFRAAITGFASSNAFPAVCSLIHTAIGLSASSGTYGS 287
Query: 367 XXXXXGTTTKYPDEATLSAMFLIIGASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLP 188
GTTTKYPD ATLSA+FL GA NPKTS RTTAAL+S PAT AL PPKLSTTLP
Sbjct: 286 PCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYALIPPKLSTTLP 107
Query: 187 FPQAGFRAGGLSQH*ELAI 131
P AG GG +QH LA+
Sbjct: 106 SPAAGLSVGGFAQHCGLAM 50
Score = 115 bits (246), Expect(3) = e-101
Identities = 47/62 (75%), Positives = 54/62 (87%)
Frame = +3 / +1
Query: 546 KAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSPPELIKQFEQVLSLNSGVGHF 725
KA+EIQ AV+ HPSFVTVDDIKEVKC I++LGAE D MSPPEL+K+FEQVLS NS + HF
Sbjct: 466 KANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSPPELVKEFEQVLSSNSXIAHF 645
Query: 726 VK 731
VK
Sbjct: 646 VK 651
Score = 107 bits (229), Expect(3) = 1e-033
Identities = 52/105 (49%), Positives = 65/105 (61%)
Frame = -2 / -3
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH +++ R I IPM+EIW+HN++ RSNF+GY+P RR + EDVG+
Sbjct: 365 FKCFSRGMLLDPHCYWSVSVFRYIWIPMQEIWHHNEISRRSNFIGYLPQIRRSKPEDVGD 186
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E L+PAEAVDDLAL G V+ V AALRA H
Sbjct: 185 ENYGGLGLLGAGDVRLDPAEAVDDLALAGGGVERRWVRAALRASH 51
Score = 88.6 bits (187), Expect(3) = 2e-026
Identities = 39/73 (53%), Positives = 47/73 (64%)
Frame = +2 / +2
Query: 290 SADYEEHSRQSCFVRVLCCGTRFLSWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWG 469
SA+ EE SR SC V + CG RFL+WGS+CT* *+ S VD+ Y GK +*R K Y
Sbjct: 209 SAESEEDSR*SCCVWIFRCGARFLAWGSICT*RR*QTNSSVDQGAYRGKSI*RGKACYRC 388
Query: 470 SKGEGSVCCWSCR 508
SKG SV CW C+
Sbjct: 389 SKGTRSV*CWGCK 427
Score = 69.8 bits (146), Expect(3) = 1e-062
Identities = 33/66 (50%), Positives = 37/66 (56%)
Frame = -3 / -3
Query: 742 PGKILTKWPTPEFKERTCSNCXXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAA 563
P + LTK E +RTCSN SAP + H TS ISSTVTKEGC+ TA
Sbjct: 662 PREDLTK*AIXELDDRTCSNSLTNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAV 483
Query: 562 WIS*AF 545
WIS AF
Sbjct: 482 WISLAF 465
Score = 47.3 bits (97), Expect(3) = 1e-033
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = -2 / -2
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSF 546
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF
Sbjct: 585 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISF 466
Score = 43.2 bits (88), Expect(3) = 2e-026
Identities = 26/61 (42%), Positives = 32/61 (52%)
Frame = +2 / +3
Query: 557 DPGCCAVAPFFCYR*RYQRGQVRNFYPRS*D*QNVPTGANQAVRAGPFFELRGWPLRQDL 736
DP VA FFCY Y+RG++ + S*+* +VPT Q VRAG L L Q
Sbjct: 477 DPDSRYVASFFCYCR*YKRGEMPHRCTWS*N*CDVPTRIGQGVRAGSII*LXDCSLCQIF 656
Query: 737 P 739
P
Sbjct: 657 P 659
Score = 35.0 bits (70), Expect(3) = e-101
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / +3
Query: 729 KIFPGVAHGWSVRYN 773
+IFPGV+HGW+ RYN
Sbjct: 648 QIFPGVSHGWTGRYN 692
Score = 26.7 bits (52), Expect(3) = 1e-033
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3 / -1
Query: 772 LYLTLHPCATPGKI 731
LYL +HP TPGKI
Sbjct: 691 LYLPVHP*ETPGKI 650
Score = 26.7 bits (52), Expect(3) = 1e-062
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2 / -3
Query: 788 SCVVVVVSHAPSMRHTREDL 729
S + ++S PSMR+ REDL
Sbjct: 707 SGIFAIISPGPSMRNPREDL 648
Score = 25.8 bits (50), Expect(3) = 2e-026
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 731 DLPWCGAWMEREI 769
+LPW +WM+REI
Sbjct: 650 NLPWGFSWMDREI 688
>gb|AV933386.1|AV933386 AV933386 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6j21 5', mRNA sequence
Length = 599
Score = 363 bits (787), Expect = e-099
Identities = 148/198 (74%), Positives = 167/198 (84%)
Frame = +3 / +2
Query: 117 RERGRMASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAP 296
R R MAS QCC NPP LNPA G+GKVVDSFGG+KAYVAG ++SKAAVVL++DVFGF AP
Sbjct: 5 RARRXMASPQCCANPPTLNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAP 184
Query: 297 IMRNIADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALK 476
+R IADKVA+SGYFVVVPDF HGDPY PE+ ++P VWIK HT K FEE K VI ALK
Sbjct: 185 NLRKIADKVAASGYFVVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALK 364
Query: 477 EKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDK 656
E+G S+VGAAGYCWGAKVV ELAKA+EIQ AV+ HPSFVTVDDIKEVKC I++LGAE D
Sbjct: 365 EQGASSVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDV 544
Query: 657 MSPPELIKQFEQVLSLNS 710
MSPPEL+K+FEQVLS NS
Sbjct: 545 MSPPELVKEFEQVLSSNS 598
Score = 247 bits (534), Expect = 8e-065
Identities = 116/193 (60%), Positives = 123/193 (63%)
Frame = -3 / -3
Query: 709 EFKERTCSNCXXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTT 530
E +RTCSN SAP + H TS ISSTVTKEGC+ TA WIS AFANS T
Sbjct: 597 ELDDRTCSNSLTNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSAT 418
Query: 529 TFAPQQYPAAPTADTPFSFRAPITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXG 350
TFAPQQ PAAPT D P SFRA IT F SSN F VC IHT G S G
Sbjct: 417 TFAPQQ*PAAPTLDAPCSFRAAITGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSG 238
Query: 349 TTTKYPDEATLSAMFLIIGASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGF 170
TTTKYPD ATLSA+FL GA NPKTS RTTAAL+S PAT AL PPKLSTTLP P AG
Sbjct: 237 TTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYALIPPKLSTTLPSPAAGL 58
Query: 169 RAGGLSQH*ELAI 131
GG +QH LA+
Sbjct: 57 SVGGFAQHCGLAM 19
Score = 107 bits (229), Expect(2) = 4e-035
Identities = 52/105 (49%), Positives = 65/105 (61%)
Frame = -2 / -2
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH +++ R I IPM+EIW+HN++ RSNF+GY+P RR + EDVG+
Sbjct: 334 FKCFSRGMLLDPHCYWSVSVFRYIWIPMQEIWHHNEISRRSNFIGYLPQIRRSKPEDVGD 155
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E L+PAEAVDDLAL G V+ V AALRA H
Sbjct: 154 ENYGGLGLLGAGDVRLDPAEAVDDLALAGGGVERRWVRAALRASH 20
Score = 90.0 bits (190), Expect(2) = 5e-024
Identities = 40/73 (54%), Positives = 47/73 (64%)
Frame = +2 / +1
Query: 290 SADYEEHSRQSCFVRVLCCGTRFLSWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWG 469
SA+ EE SR SC V + CG RFL+WGS+CT* *+ S VD+ Y GK +*R K Y
Sbjct: 178 SAESEEDSR*SCCVWIFRCGARFLAWGSICT*RR*QTNSSVDQGAYRGKSI*RGKACYRC 357
Query: 470 SKGEGSVCCWSCR 508
SKG SV CW CR
Sbjct: 358 SKGTRSV*CWGCR 396
Score = 61.1 bits (127), Expect(2) = 4e-035
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2 / -2
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 553 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 392
Score = 41.4 bits (84), Expect(2) = 5e-024
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +2 / +1
Query: 557 DPGCCAVAPFFCYR*RYQRGQVRNFYPRS*D*QNVPTGANQAVRAG 694
DP VA FFCY Y+RG++ + S*+* +VPT Q VRAG
Sbjct: 445 DPDSRYVASFFCYCR*YKRGEMPHRCTWS*N*CDVPTRIGQGVRAG 582
>gb|AV933542.1|AV933542 AV933542 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal7f16 5', mRNA sequence
Length = 590
Score = 357 bits (773), Expect = 8e-098
Identities = 144/190 (75%), Positives = 163/190 (85%)
Frame = +3 / +1
Query: 132 MASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNI 311
MAS QCC NPP LNPA G+GKVVDSFGG+KAYVAG ++SKAAVVL++DVFGF AP +R I
Sbjct: 16 MASPQCCANPPTLNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAPNLRKI 195
Query: 312 ADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVS 491
ADKVA+SGYFVVVPDF HGDPY PE+ ++P VWIK HT K FEE K VI ALKE+G S
Sbjct: 196 ADKVAASGYFVVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGAS 375
Query: 492 AVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSPPE 671
+VGAAGYCWGAKVV ELAKA+EIQ AV+ HPSFVTVDDIKEVKC I++LGAE D MSPPE
Sbjct: 376 SVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSPPE 555
Query: 672 LIKQFEQVLS 701
L+K+FEQVLS
Sbjct: 556 LVKEFEQVLS 585
Score = 245 bits (530), Expect = 3e-064
Identities = 115/190 (60%), Positives = 122/190 (64%)
Frame = -3 / -1
Query: 700 ERTCSNCXXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFA 521
+RTCSN SAP + H TS ISSTVTKEGC+ TA WIS AFANS TTFA
Sbjct: 584 DRTCSNSLTNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSATTFA 405
Query: 520 PQQYPAAPTADTPFSFRAPITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTT 341
PQQ PAAPT D P SFRA IT F SSN F VC IHT G S GTTT
Sbjct: 404 PQQ*PAAPTLDAPCSFRAAITGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSGTTT 225
Query: 340 KYPDEATLSAMFLIIGASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAG 161
KYPD ATLSA+FL GA NPKTS RTTAAL+S PAT AL PPKLSTTLP P AG G
Sbjct: 224 KYPDAATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYALIPPKLSTTLPSPAAGLSVG 45
Query: 160 GLSQH*ELAI 131
G +QH LA+
Sbjct: 44 GFAQHCGLAM 15
Score = 107 bits (229), Expect(2) = 4e-035
Identities = 52/105 (49%), Positives = 65/105 (61%)
Frame = -2 / -3
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH +++ R I IPM+EIW+HN++ RSNF+GY+P RR + EDVG+
Sbjct: 330 FKCFSRGMLLDPHCYWSVSVFRYIWIPMQEIWHHNEISRRSNFIGYLPQIRRSKPEDVGD 151
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E L+PAEAVDDLAL G V+ V AALRA H
Sbjct: 150 ENYGGLGLLGAGDVRLDPAEAVDDLALAGGGVERRWVRAALRASH 16
Score = 90.0 bits (190), Expect(2) = 5e-024
Identities = 40/73 (54%), Positives = 47/73 (64%)
Frame = +2 / +3
Query: 290 SADYEEHSRQSCFVRVLCCGTRFLSWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWG 469
SA+ EE SR SC V + CG RFL+WGS+CT* *+ S VD+ Y GK +*R K Y
Sbjct: 174 SAESEEDSR*SCCVWIFRCGARFLAWGSICT*RR*QTNSSVDQGAYRGKSI*RGKACYRC 353
Query: 470 SKGEGSVCCWSCR 508
SKG SV CW CR
Sbjct: 354 SKGTRSV*CWGCR 392
Score = 61.1 bits (127), Expect(2) = 4e-035
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2 / -3
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 549 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 388
Score = 41.4 bits (84), Expect(2) = 5e-024
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +2 / +3
Query: 557 DPGCCAVAPFFCYR*RYQRGQVRNFYPRS*D*QNVPTGANQAVRAG 694
DP VA FFCY Y+RG++ + S*+* +VPT Q VRAG
Sbjct: 441 DPDSRYVASFFCYCR*YKRGEMPHRCTWS*N*CDVPTRIGQGVRAG 578
>gb|BF260055.2|BF260055 HVSMEf0020P20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020P20f, mRNA sequence
Length = 803
Score = 341 bits (740), Expect(2) = 8e-094
Identities = 138/200 (69%), Positives = 159/200 (79%)
Frame = +3 / +2
Query: 75 SALSSPPRVHDPRERERGRMASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKA 254
S + P +P GRMA+ QCC +PP LNPA G+GKVVDSFGG+ AYV+G +SKA
Sbjct: 71 SRIPPSPSPQEPAASALGRMATPQCCADPPTLNPAGGEGKVVDSFGGITAYVSGARESKA 250
Query: 255 AVVLVADVFGFEAPIMRNIADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPE 434
AVVL++DVFGFEAP +R IADKVASSGY VVVPDF HGDPY PEN ++P VW+K H P
Sbjct: 251 AVVLISDVFGFEAPNLRKIADKVASSGYLVVVPDFLHGDPYVPENADRPIQVWLKEHAPG 430
Query: 435 KGFEETKQVIGALKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKE 614
K FEE K VI ALKE+GVS VGAAGYCWGAKVV ELAKA+EI AAV+ HPSFVTV+DIKE
Sbjct: 431 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAKVVAELAKANEIHAAVMSHPSFVTVEDIKE 610
Query: 615 VKCAISILGAEIDKMSPPEL 674
VKC I++LGAEIDK SPP +
Sbjct: 611 VKCPIAVLGAEIDKTSPPRI 670
Score = 251 bits (543), Expect(2) = 9e-068
Identities = 116/184 (63%), Positives = 126/184 (68%)
Frame = -3 / -3
Query: 643 APRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAPTADTPFSFRAP 464
AP + H TSLISSTVTKEGC+ TAAWIS AFA+S TTFAPQQ PAAPT DTP S RA
Sbjct: 639 APSTAMGHFTSLISSTVTKEGCDITAAWISLAFASSATTFAPQQ*PAAPTVDTPCSLRAA 460
Query: 463 ITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIGASN 284
IT F SSN F G C F HT G S F GTTTKYPDEATLSA+FL GASN
Sbjct: 459 ITGFASSNAFPGACSFNHTCIGLSAFSGTYGSPCKKSGTTTKYPDEATLSAIFLRFGASN 280
Query: 283 PKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAIRPLSLSLGS 104
PKTS RTTAAL+S P T A+ PPKLSTTLP P AG GG +QH +AI P + + GS
Sbjct: 279 PKTSEMRTTAALDSRAPETYAVIPPKLSTTLPSPPAGLSVGGSAQHCGVAILPSAEAAGS 100
Query: 103 WTRG 92
W G
Sbjct: 99 WGLG 88
Score = 105 bits (223), Expect(3) = 1e-038
Identities = 51/105 (48%), Positives = 62/105 (59%)
Frame = -2 / -2
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH + + R I IPM EIW+HN + RS+F+GY+P RRF+ EDVG+
Sbjct: 442 FKCFSRGMLL*PHLYWSVGVFRYIWIPM*EIWHHN*ISRRSDFIGYLPQIRRFKPEDVGD 263
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E +PAEAV DLAL AG V+ RV AALR H
Sbjct: 262 EDDGGLGLSGAGDVRRDPAEAVHDLALAAGGVERRRVRAALRGSH 128
Score = 77.1 bits (162), Expect(2) = 2e-023
Identities = 35/73 (47%), Positives = 45/73 (61%)
Frame = +2 / +1
Query: 290 SADYEEHSRQSCFVRVLCCGTRFLSWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWG 469
SA+ EE SR S FV + CG RFL+WGS+CT*+ + + V K GK +*R KT Y
Sbjct: 286 SAESEEDSR*SRFVWIFSCGARFLTWGSICT*KRRQTNTSVVKGACPGKSI*RGKTCYCC 465
Query: 470 SKGEGSVCCWSCR 508
S+ S+ CW CR
Sbjct: 466 SQRTRSIYCWGCR 504
Score = 69.8 bits (146), Expect(3) = 1e-038
Identities = 31/54 (57%), Positives = 36/54 (66%)
Frame = -2 / -2
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WG FVN SS+ A LFDI N NKRRV +S +DL+SF L N+ CTPAI C
Sbjct: 661 WGCFVNFSSKYSYGAFHLFDIFNSNKRRV*HNSCMDLISFR*LSNHFCTPAITC 500
Score = 52.4 bits (108), Expect(2) = 2e-023
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +2 / +1
Query: 557 DPGCCAVAPFFCYR*RYQRGQVRNFYPRS*D*QNVPT 667
DP C V PFFCY *RYQRG++ + S*+*QN+PT
Sbjct: 553 DPCSCYVTPFFCYC*RYQRGEMPHSCTWS*N*QNIPT 663
Score = 26.3 bits (51), Expect(2) = 9e-068
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3 / -2
Query: 745 TPGKILTKWPTPEFKERTCSNC 680
T G LTK + ++R CSNC
Sbjct: 742 TQGNFLTK*AILKLEDRPCSNC 677
Score = 24.0 bits (46), Expect(3) = 1e-038
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1 / -3
Query: 741 QGRS*RSGQPLSSKKGPARTA* 676
+G S*+S Q LS + PARTA*
Sbjct: 738 RGIS*QSEQSLS*RTDPARTA* 673
Score = 23.1 bits (44), Expect(2) = 8e-094
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2 / +2
Query: 662 PTGANQAVRAGPFFELRGWPLRQDLP 739
P QAVRAG L+ L Q++P
Sbjct: 659 PPRIGQAVRAGSVL*LKDCSLCQEIP 736
>gb|BF621761.2|BF621761 HVSMEa0012H13f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0012H13f, mRNA sequence
Length = 908
Score = 334 bits (724), Expect(2) = 2e-091
Identities = 135/182 (74%), Positives = 153/182 (84%)
Frame = +3 / +1
Query: 129 RMASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRN 308
RMA+ QCC +PP LNPA G+GKVVDSFGG+ AYV+G +SKAAVVL++DVFGFEAP +R
Sbjct: 16 RMATPQCCADPPTLNPAGGEGKVVDSFGGITAYVSGARESKAAVVLISDVFGFEAPNLRK 195
Query: 309 IADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGV 488
IADKVASSGY VVVPDF HGDPY PEN ++P VW+K H P K FEE K VI ALKE+GV
Sbjct: 196 IADKVASSGYLVVVPDFLHGDPYVPENADRPIQVWLKEHAPGKAFEEAKPVIAALKEQGV 375
Query: 489 SAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSPP 668
S VGAAGYCWGAKVV ELAKA+EI AAV+ HPSF TV+DIKEVKCAI++LGAEIDK PP
Sbjct: 376 STVGAAGYCWGAKVVAELAKANEIHAAVMSHPSFGTVEDIKEVKCAIAVLGAEIDKTFPP 555
Query: 669 EL 674
EL
Sbjct: 556 EL 561
Score = 239 bits (517), Expect = 2e-062
Identities = 111/171 (64%), Positives = 119/171 (69%)
Frame = -3 / -1
Query: 643 APRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAPTADTPFSFRAP 464
AP +AH TSLISSTV KEGC+ TAAWIS AFA+S TTFAPQQ PAAPT DTP S RA
Sbjct: 530 APSTAMAHFTSLISSTVPKEGCDITAAWISLAFASSATTFAPQQ*PAAPTVDTPCSLRAA 351
Query: 463 ITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIGASN 284
IT F SSN F G C F HT G S F GTTTKYPDEATLSA+FL GASN
Sbjct: 350 ITGFASSNAFPGACSFNHTCIGLSAFSGTYGSPCKKSGTTTKYPDEATLSAIFLRFGASN 171
Query: 283 PKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAI 131
PKTS RTTAAL+S P T A+ PPKLSTTLP P AG GG +QH +AI
Sbjct: 170 PKTSEMRTTAALDSRAPETYAVIPPKLSTTLPSPPAGLSVGGSAQHCGVAI 18
Score = 105 bits (223), Expect(2) = 1e-035
Identities = 51/105 (48%), Positives = 62/105 (59%)
Frame = -2 / -3
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH + + R I IPM EIW+HN + RS+F+GY+P RRF+ EDVG+
Sbjct: 333 FKCFSRGMLL*PHLYWSVGVFRYIWIPM*EIWHHN*ISRRSDFIGYLPQIRRFKPEDVGD 154
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E +PAEAV DLAL AG V+ RV AALR H
Sbjct: 153 EDDGGLGLSGAGDVRRDPAEAVHDLALAAGGVERRRVRAALRGSH 19
Score = 77.1 bits (162), Expect(2) = 7e-023
Identities = 35/73 (47%), Positives = 45/73 (61%)
Frame = +2 / +3
Query: 290 SADYEEHSRQSCFVRVLCCGTRFLSWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWG 469
SA+ EE SR S FV + CG RFL+WGS+CT*+ + + V K GK +*R KT Y
Sbjct: 177 SAESEEDSR*SRFVWIFSCGARFLTWGSICT*KRRQTNTSVVKGACPGKSI*RGKTCYCC 356
Query: 470 SKGEGSVCCWSCR 508
S+ S+ CW CR
Sbjct: 357 SQRTRSIYCWGCR 395
Score = 65.2 bits (136), Expect(2) = 1e-035
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -2 / -3
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
W FVN SS+ A LFDI N KRRV +S +DL+SF L N+LCTPAI C
Sbjct: 552 WECFVNFSSKYSYGAFHLFDIFNSTKRRV*HNSCMDLISFR*LSNHLCTPAITC 391
Score = 50.6 bits (104), Expect(2) = 7e-023
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +2 / +3
Query: 557 DPGCCAVAPFFCYR*RYQRGQVRNFYPRS*D*QNVPT 667
DP C V PFF Y *RYQRG++R+ S*+*QN+PT
Sbjct: 444 DPCSCYVTPFFWYC*RYQRGEMRHSCTWS*N*QNIPT 554
Score = 22.1 bits (42), Expect(2) = 2e-091
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2 / +1
Query: 662 PTGANQAVRAGPFFELRGW 718
P QAV+AG L GW
Sbjct: 550 PPELGQAVQAGSVLLLTGW 606
>gb|AV915236.1|AV915236 AV915236 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13h19 5', mRNA sequence
Length = 607
Score = 332 bits (719), Expect = 2e-090
Identities = 134/178 (75%), Positives = 151/178 (84%)
Frame = +3 / +3
Query: 132 MASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNI 311
MAS QCC NPP LNPA G+GKVVDSFGG+KAYVAG ++SKAAVVL++DVFGF AP +R I
Sbjct: 72 MASPQCCANPPTLNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAPNLRKI 251
Query: 312 ADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVS 491
ADKVA+SGYFVVVPDF HGDPY PE+ ++P VWIK HT K FEE K VI ALKE+G S
Sbjct: 252 ADKVAASGYFVVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGAS 431
Query: 492 AVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSP 665
+VGAAGYCWGAKVV ELAKA+EIQ AV+ HPSFVTVDDIKEVKC I++LGAE D MSP
Sbjct: 432 SVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSP 605
Score = 235 bits (507), Expect = 4e-061
Identities = 109/171 (63%), Positives = 115/171 (67%)
Frame = -3 / -1
Query: 643 APRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAPTADTPFSFRAP 464
AP + H TS ISSTVTKEGC+ TA WIS AFANS TTFAPQQ PAAPT D P SFRA
Sbjct: 583 APSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSATTFAPQQ*PAAPTLDAPCSFRAA 404
Query: 463 ITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIGASN 284
IT F SSN F VC IHT G S GTTTKYPD ATLSA+FL GA N
Sbjct: 403 ITGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPN 224
Query: 283 PKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAI 131
PKTS RTTAAL+S PAT AL PPKLSTTLP P AG GG +QH LA+
Sbjct: 223 PKTSEMRTTAALDSWAPATYALIPPKLSTTLPSPAAGLSVGGFAQHCGLAM 71
Score = 107 bits (229), Expect(2) = 4e-035
Identities = 52/105 (49%), Positives = 65/105 (61%)
Frame = -2 / -3
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH +++ R I IPM+EIW+HN++ RSNF+GY+P RR + EDVG+
Sbjct: 386 FKCFSRGMLLDPHCYWSVSVFRYIWIPMQEIWHHNEISRRSNFIGYLPQIRRSKPEDVGD 207
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E L+PAEAVDDLAL G V+ V AALRA H
Sbjct: 206 ENYGGLGLLGAGDVRLDPAEAVDDLALAGGGVERRWVRAALRASH 72
Score = 90.0 bits (190), Expect(2) = 9e-023
Identities = 40/73 (54%), Positives = 47/73 (64%)
Frame = +2 / +2
Query: 290 SADYEEHSRQSCFVRVLCCGTRFLSWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWG 469
SA+ EE SR SC V + CG RFL+WGS+CT* *+ S VD+ Y GK +*R K Y
Sbjct: 230 SAESEEDSR*SCCVWIFRCGARFLAWGSICT*RR*QTNSSVDQGAYRGKSI*RGKACYRC 409
Query: 470 SKGEGSVCCWSCR 508
SKG SV CW CR
Sbjct: 410 SKGTRSV*CWGCR 448
Score = 61.1 bits (127), Expect(2) = 4e-035
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2 / -3
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 605 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 444
Score = 37.3 bits (75), Expect(2) = 9e-023
Identities = 24/54 (44%), Positives = 27/54 (50%)
Frame = +1 / +1
Query: 505 QGIAGVQRLLWSWQKLMRSRXXXXXXXXXXXXXISKRSSAQFLSSELRLTKCPH 666
Q I GVQR S +KLMRSR I KR +A L EL+L CPH
Sbjct: 445 QVIVGVQR*SQS*RKLMRSRQPLCRILLLLLSMI*KR*NAPSLYLELKLM*CPH 606
>gb|AV934062.1|AV934062 AV934062 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baalo04 5', mRNA sequence
Length = 534
Score = 330 bits (714), Expect = 1e-089
Identities = 133/177 (75%), Positives = 150/177 (84%)
Frame = +3 / +2
Query: 135 ASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNIA 314
AS QCC NPP LNPA G+GKVVDSFGG+KAYVAG ++SKAAVVL++DVFGF AP +R IA
Sbjct: 2 ASPQCCANPPTLNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAPNLRKIA 181
Query: 315 DKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVSA 494
DKVA+SGYFVVVPDF HGDPY PE+ ++P VWIK HT K FEE K VI ALKE+G S+
Sbjct: 182 DKVAASGYFVVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGASS 361
Query: 495 VGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSP 665
VGAAGYCWGAKVV ELAKA+EIQ AV+ HPSFVTVDDIKEVKC I++LGAE D MSP
Sbjct: 362 VGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSP 532
Score = 234 bits (506), Expect = 6e-061
Identities = 109/170 (64%), Positives = 114/170 (67%)
Frame = -3 / -1
Query: 643 APRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAPTADTPFSFRAP 464
AP + H TS ISSTVTKEGC+ TA WIS AFANS TTFAPQQ PAAPT D P SFRA
Sbjct: 510 APSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSATTFAPQQ*PAAPTLDAPCSFRAA 331
Query: 463 ITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIGASN 284
IT F SSN F VC IHT G S GTTTKYPD ATLSA+FL GA N
Sbjct: 330 ITGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPN 151
Query: 283 PKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELA 134
PKTS RTTAAL+S PAT AL PPKLSTTLP P AG GG +QH LA
Sbjct: 150 PKTSEMRTTAALDSWAPATYALIPPKLSTTLPSPAAGLSVGGFAQHCGLA 1
Score = 104 bits (222), Expect(2) = 3e-034
Identities = 51/103 (49%), Positives = 64/103 (62%)
Frame = -2 / -3
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH +++ R I IPM+EIW+HN++ RSNF+GY+P RR + EDVG+
Sbjct: 313 FKCFSRGMLLDPHCYWSVSVFRYIWIPMQEIWHHNEISRRSNFIGYLPQIRRSKPEDVGD 134
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRA 138
E L+PAEAVDDLAL G V+ V AALRA
Sbjct: 133 ENYGGLGLLGAGDVRLDPAEAVDDLALAGGGVERRWVRAALRA 5
Score = 90.0 bits (190), Expect(2) = 9e-023
Identities = 40/73 (54%), Positives = 47/73 (64%)
Frame = +2 / +1
Query: 290 SADYEEHSRQSCFVRVLCCGTRFLSWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWG 469
SA+ EE SR SC V + CG RFL+WGS+CT* *+ S VD+ Y GK +*R K Y
Sbjct: 157 SAESEEDSR*SCCVWIFRCGARFLAWGSICT*RR*QTNSSVDQGAYRGKSI*RGKACYRC 336
Query: 470 SKGEGSVCCWSCR 508
SKG SV CW CR
Sbjct: 337 SKGTRSV*CWGCR 375
Score = 61.1 bits (127), Expect(2) = 3e-034
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2 / -3
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 532 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 371
Score = 37.3 bits (75), Expect(2) = 9e-023
Identities = 24/54 (44%), Positives = 27/54 (50%)
Frame = +1 / +3
Query: 505 QGIAGVQRLLWSWQKLMRSRXXXXXXXXXXXXXISKRSSAQFLSSELRLTKCPH 666
Q I GVQR S +KLMRSR I KR +A L EL+L CPH
Sbjct: 372 QVIVGVQR*SQS*RKLMRSRQPLCRILLLLLSMI*KR*NAPSLYLELKLM*CPH 533
>gb|BF258180.2|BF258180 HVSMEf0015A11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0015A11f, mRNA sequence
Length = 875
Score = 310 bits (672), Expect = 7e-084
Identities = 128/194 (65%), Positives = 147/194 (75%)
Frame = +3 / +3
Query: 75 SALSSPPRVHDPRERERGRMASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKA 254
S + P +P GRMA+ QCC +PP LNPA G+GKVVDSFGG+ AYV+G +SKA
Sbjct: 33 SRIPPGPSPQEPAASALGRMATPQCCADPPTLNPAGGEGKVVDSFGGITAYVSGARESKA 212
Query: 255 AVVLVADVFGFEAPIMRNIADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPE 434
AVVL++DVFGFEAP +R IADKVASSGY VVVPD HGDPY PEN ++P VW+K H P
Sbjct: 213 AVVLISDVFGFEAPNLRKIADKVASSGYLVVVPDILHGDPYVPENADRPIHVWLKEHAPG 392
Query: 435 KGFEETKQVIGALKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKE 614
K FEE K VI ALKE+GVS VGAAGYCWGAKVV ELAKAHEI A + HPS T +DIKE
Sbjct: 393 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAKVVAELAKAHEIHAGGMSHPSLGTGEDIKE 572
Query: 615 VKCAISILGAEIDK 656
VKC I+ LGA ID+
Sbjct: 573 VKCPIAELGAGIDE 614
Score = 243 bits (524), Expect = 2e-063
Identities = 113/184 (61%), Positives = 123/184 (66%)
Frame = -3 / -2
Query: 643 APRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAPTADTPFSFRAP 464
AP + H TSLISS V KEGC+ AWIS*AFA+S TTFAPQQ PAAPT DTP S RA
Sbjct: 601 APSSAMGHFTSLISSPVPKEGCDIPPAWIS*AFASSATTFAPQQ*PAAPTVDTPCSLRAA 422
Query: 463 ITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIGASN 284
IT F SSN F G C F HT G S F GTTTKYPDEATLSA+FL GASN
Sbjct: 421 ITGFASSNAFPGACSFNHTCIGLSAFSGTYGSPCKISGTTTKYPDEATLSAIFLRFGASN 242
Query: 283 PKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAIRPLSLSLGS 104
PKTS RTTAAL+S P T A+ PPKLSTTLP P AG GG +QH +AI P + + GS
Sbjct: 241 PKTSEMRTTAALDSRAPETYAVIPPKLSTTLPSPPAGLSVGGSAQHCGVAILPSAEAAGS 62
Query: 103 WTRG 92
W G
Sbjct: 61 WGLG 50
Score = 100 bits (213), Expect(3) = 2e-031
Identities = 48/105 (45%), Positives = 60/105 (57%)
Frame = -2 / -1
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH + + R I IPM +IW+HN + RS+F+GY+P RRF+ EDVG+
Sbjct: 404 FKCFSRGMLL*PHMYWSVGVFRYIWIPM*DIWHHN*ISRRSDFIGYLPQIRRFKPEDVGD 225
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E +PAEAV D AL AG V+ RV ALR H
Sbjct: 224 EDDGGLGLSGAGDVRRDPAEAVHDFALAAGGVERRRVRTALRGSH 90
Score = 51.0 bits (105), Expect(3) = 2e-031
Identities = 26/51 (50%), Positives = 30/51 (58%)
Frame = -2 / -1
Query: 656 FVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
FVN SS A L DI +RRV + +DLMSF L N+LCTPAI C
Sbjct: 614 FVNSSS*FSYGAFHLLDIFTSTQRRV*HTTCMDLMSFR*LSNHLCTPAITC 462
Score = 23.1 bits (44), Expect(3) = 2e-031
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 812 GFLSTLHGSCV 780
GFLS++H +CV
Sbjct: 757 GFLSSVHSTCV 725
>gb|BM375339.2|BM375339 EBem06_SQ003_A21_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_A21 5', mRNA sequence
Length = 546
Score = 303 bits (656), Expect = 1e-081
Identities = 122/161 (75%), Positives = 137/161 (85%)
Frame = +3 / +1
Query: 132 MASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNI 311
MAS QCC NPP LNPA G+GKVVDSFGG+KAYVAG ++SKAAVVL++DVFGF AP +R I
Sbjct: 64 MASPQCCANPPTLNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAPNLRKI 243
Query: 312 ADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVS 491
ADKVA+SGYFVVVPDF HGDPY PE+ ++P VWIK HT K FEE K VI ALKE+G S
Sbjct: 244 ADKVAASGYFVVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGAS 423
Query: 492 AVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKE 614
+VGAAGYCWGAKVV ELAKA+EIQ AV+ HPSFVTVDDIKE
Sbjct: 424 SVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKE 546
Score = 225 bits (485), Expect = 4e-058
Identities = 105/161 (65%), Positives = 110/161 (68%)
Frame = -3 / -2
Query: 613 SLISSTVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAPTADTPFSFRAPITCFVSSNPF 434
S ISSTVTKEGC+ TA WIS AFANS TTFAPQQ PAAPT D P SFRA IT F SSN F
Sbjct: 545 SFISSTVTKEGCDITAVWISLAFANSATTFAPQQ*PAAPTLDAPCSFRAAITGFASSNAF 366
Query: 433 SGVCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIGASNPKTSATRTTA 254
VC IHT G S GTTTKYPD ATLSA+FL GA NPKTS RTTA
Sbjct: 365 PAVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTA 186
Query: 253 ALESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAI 131
AL+S PAT AL PPKLSTTLP P AG GG +QH LA+
Sbjct: 185 ALDSWAPATYALIPPKLSTTLPSPAAGLSVGGFAQHCGLAM 63
Score = 107 bits (229), Expect(2) = 2e-030
Identities = 52/105 (49%), Positives = 65/105 (61%)
Frame = -2 / -1
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH +++ R I IPM+EIW+HN++ RSNF+GY+P RR + EDVG+
Sbjct: 378 FKCFSRGMLLDPHCYWSVSVFRYIWIPMQEIWHHNEISRRSNFIGYLPQIRRSKPEDVGD 199
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E L+PAEAVDDLAL G V+ V AALRA H
Sbjct: 198 ENYGGLGLLGAGDVRLDPAEAVDDLALAGGGVERRWVRAALRASH 64
Score = 45.5 bits (93), Expect(2) = 2e-030
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = -2 / -1
Query: 614 LFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
LF I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 546 LFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 436
>gb|AV934980.1|AV934980 AV934980 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2g20 3', mRNA sequence
Length = 701
Score = 298 bits (646), Expect = 3e-080
Identities = 118/171 (69%), Positives = 134/171 (78%)
Frame = +3 / -3
Query: 342 VVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVSAVGAAGYCWG 521
VVVPDF HGDPY PEN ++P VW+K H P K FEE K VI ALKE+GVS VGAAGYCWG
Sbjct: 699 VVVPDFLHGDPYVPENADRPIQVWLKEHAPGKAFEEAKPVIAALKEQGVSTVGAAGYCWG 520
Query: 522 AKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSPPELIKQFEQVLS 701
AKVV ELAKA+EI AAV+ HPSFVTV+DIKEVKC I++LGAEIDK SPPEL+KQFEQVLS
Sbjct: 519 AKVVAELAKANEIHAAVMSHPSFVTVEDIKEVKCPIAVLGAEIDKTSPPELVKQFEQVLS 340
Query: 702 LNSGVGHFVKIFPGVAHGWSVRYNHXXXXXXXXXXXXXXXMLDWFNKNLK* 854
NSG+ HFVKIFPGV+HGW+VRY M+DWF+KNL+*
Sbjct: 339 SNSGIAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 187
Score = 197 bits (424), Expect = 1e-049
Identities = 93/173 (53%), Positives = 103/173 (59%)
Frame = -3 / +2
Query: 859 RVYFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKERTCSNC 680
+++ RFLLNQS + S LYLT+HP TPG ILTK PE ++RTCSNC
Sbjct: 182 QIHCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*AIPELEDRTCSNC 361
Query: 679 XXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAA 500
SAP + H TSLISSTVTKEGC+ TAAWIS AFA+S TTFAPQQ PAA
Sbjct: 362 LTNSGGDVLSISAPSTAMGHFTSLISSTVTKEGCDITAAWISLAFASSATTFAPQQ*PAA 541
Query: 499 PTADTPFSFRAPITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTT 341
PT DTP S RA IT F SSN F G C F HT G S F GTTT
Sbjct: 542 PTVDTPCSLRAAITGFASSNAFPGACSFNHTCIGLSAFSGTYGSPCKKSGTTT 700
Score = 137 bits (293), Expect(2) = 2e-039
Identities = 61/114 (53%), Positives = 78/114 (68%)
Frame = -2 / +1
Query: 845 ILVEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQRKXXXXXXXXLR 666
+L +PV+H+ +GFLSTLH +CV VSH+PSMR+ RE LD+V+NP*V+ +
Sbjct: 196 VLAKPVDHM*QGFLSTLHSTCVFTFVSHSPSMRNPREYLDKVSNP*VRGQNLLELLDQFW 375
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WG FVN SS+ A LFDI N NKRRV +S +DL+SF L N+LCTPAI C
Sbjct: 376 WGCFVNFSSKYSYGAFHLFDIFNSNKRRV*HNSCMDLISFR*LSNHLCTPAITC 537
Score = 89.0 bits (188), Expect(2) = 5e-030
Identities = 40/72 (55%), Positives = 48/72 (66%)
Frame = +2 / -2
Query: 557 DPGCCAVAPFFCYR*RYQRGQVRNFYPRS*D*QNVPTGANQAVRAGPFFELRGWPLRQDL 736
DP C V PFFCY *RYQRG++ + S*+*QN+PT QAVRAG LR L QD+
Sbjct: 484 DPCSCYVTPFFCYC*RYQRGEMPHSCTWS*N*QNIPTRIGQAVRAGSVL*LRDCSLCQDI 305
Query: 737 PWCGAWMEREIQ 772
PW +WM+ EIQ
Sbjct: 304 PWGFSWMDCEIQ 269
Score = 83.5 bits (176), Expect(3) = 1e-030
Identities = 44/85 (51%), Positives = 53/85 (62%)
Frame = -1 / +3
Query: 891 TRIITRQDAIAEFISDSC*TSRACPQRLPQHSSRQLRRRGCISRSIHAPHQGRS*RSGQP 712
T ++ +D F SC*TSR+ LPQHSS+ LR CIS+SIH QG S*+S Q
Sbjct: 150 TGVLRTKDR*FRFTVGSC*TSRSYVTGLPQHSSQHLRLHFCISQSIHEKPQGIS*QSEQS 329
Query: 711 LSSKKGPARTA*LAPVGTFCQSQLR 637
LS + PARTA* VG FCQ QL+
Sbjct: 330 LS*RTEPARTA*PILVGMFCQFQLQ 404
Score = 83.1 bits (175), Expect(2) = 2e-023
Identities = 53/113 (46%), Positives = 58/113 (51%)
Frame = +1 / -1
Query: 505 QGIAGVQRLLWSWQKLMRSRXXXXXXXXXXXXXISKRSSAQFLSSELRLTKCPHXXXXXX 684
Q IAGVQR L S +KLMRS ISKR +A L EL+LTK PH
Sbjct: 536 QVIAGVQRWLLS*RKLMRSMQLLCHTLLLLLLKISKR*NAP*LYLELKLTKHPHQNWSSS 357
Query: 685 XXXXFL*TQGLATSSRSSLVWRMDGA*DXXXXXQLP*RVLRKPLRTCSTGSTR 843
TQGL T SR SL + MDG *D Q+ *RVLRKP STG R
Sbjct: 356 SSRFCPLTQGLLTLSRYSLGFLMDGL*DTKVKTQVL*RVLRKPCHI*STGLAR 198
Score = 62.5 bits (130), Expect(2) = 5e-030
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +2 / -2
Query: 344 CGTRFLSWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWGSKGEGSVCCWSCR 508
CG RFL+WGS+CT*+ + + V K GK +*R KT Y S+ S+ CW CR
Sbjct: 697 CGARFLTWGSICT*KRRQTNTSVVKGACPGKSI*RGKTCYCCSQRTRSIYCWGCR 533
Score = 48.3 bits (99), Expect(3) = 1e-030
Identities = 23/35 (65%), Positives = 24/35 (68%)
Frame = -1 / +3
Query: 615 PL*YRQR*QKKGATAQQPGSHELLPTPQQPLHPSN 511
PL*Y Q+*QKKG T Q GSH L Q PLHPSN
Sbjct: 426 PL*YLQQ*QKKGVT*QLHGSH*LSLAQQPPLHPSN 530
Score = 46.4 bits (95), Expect(2) = 2e-039
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = -1 / +3
Query: 456 VLSLQTLFPEYVTLSTQERASQHSQVHKDPHERNLVPQ 343
VL LQ LFP + L+T + QVH DPH RNL PQ
Sbjct: 585 VLPLQMLFPGHAPLTTLVLVCRRFQVHMDPHVRNLAPQ 698
Score = 46.4 bits (95), Expect(2) = 2e-023
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +1 / -1
Query: 343 LWYQISFMGILMHLRMLRSPFLCG*SHILRKKGLKRQN 456
LW QIS+MGI M+L+ + CG* + R+K LKRQN
Sbjct: 698 LWCQISYMGIHMYLKTPTDQYKCG*RSMPREKHLKRQN 585
Score = 40.0 bits (81), Expect(3) = 1e-030
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -2 / +1
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHN 342
FK F R M L PH + + R I IPM EIW+HN
Sbjct: 595 FKCFSRGMLL*PHLYWSVGVFRYIWIPM*EIWHHN 699
>gb|BJ476097.1|BJ476097 BJ476097 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal31o24 3', mRNA sequence
Length = 690
Score = 298 bits (646), Expect = 3e-080
Identities = 118/171 (69%), Positives = 134/171 (78%)
Frame = +3 / -2
Query: 342 VVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVSAVGAAGYCWG 521
VVVPDF HGDPY PEN ++P VW+K H P K FEE K VI ALKE+GVS VGAAGYCWG
Sbjct: 689 VVVPDFLHGDPYVPENADRPIQVWLKEHAPGKAFEEAKPVIAALKEQGVSTVGAAGYCWG 510
Query: 522 AKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSPPELIKQFEQVLS 701
AKVV ELAKA+EI AAV+ HPSFVTV+DIKEVKC I++LGAEIDK SPPEL+KQFEQVLS
Sbjct: 509 AKVVAELAKANEIHAAVMSHPSFVTVEDIKEVKCPIAVLGAEIDKTSPPELVKQFEQVLS 330
Query: 702 LNSGVGHFVKIFPGVAHGWSVRYNHXXXXXXXXXXXXXXXMLDWFNKNLK* 854
NSG+ HFVKIFPGV+HGW+VRY M+DWF+KNL+*
Sbjct: 329 SNSGIAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 177
Score = 197 bits (424), Expect = 1e-049
Identities = 93/173 (53%), Positives = 103/173 (59%)
Frame = -3 / +1
Query: 859 RVYFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKERTCSNC 680
+++ RFLLNQS + S LYLT+HP TPG ILTK PE ++RTCSNC
Sbjct: 172 QIHCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*AIPELEDRTCSNC 351
Query: 679 XXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAA 500
SAP + H TSLISSTVTKEGC+ TAAWIS AFA+S TTFAPQQ PAA
Sbjct: 352 LTNSGGDVLSISAPSTAMGHFTSLISSTVTKEGCDITAAWISLAFASSATTFAPQQ*PAA 531
Query: 499 PTADTPFSFRAPITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTT 341
PT DTP S RA IT F SSN F G C F HT G S F GTTT
Sbjct: 532 PTVDTPCSLRAAITGFASSNAFPGACSFNHTCIGLSAFSGTYGSPCKKSGTTT 690
Score = 137 bits (293), Expect(2) = 2e-039
Identities = 61/114 (53%), Positives = 78/114 (68%)
Frame = -2 / +3
Query: 845 ILVEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQRKXXXXXXXXLR 666
+L +PV+H+ +GFLSTLH +CV VSH+PSMR+ RE LD+V+NP*V+ +
Sbjct: 186 VLAKPVDHM*QGFLSTLHSTCVFTFVSHSPSMRNPREYLDKVSNP*VRGQNLLELLDQFW 365
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WG FVN SS+ A LFDI N NKRRV +S +DL+SF L N+LCTPAI C
Sbjct: 366 WGCFVNFSSKYSYGAFHLFDIFNSNKRRV*HNSCMDLISFR*LSNHLCTPAITC 527
Score = 89.0 bits (188), Expect(2) = 5e-030
Identities = 40/72 (55%), Positives = 48/72 (66%)
Frame = +2 / -1
Query: 557 DPGCCAVAPFFCYR*RYQRGQVRNFYPRS*D*QNVPTGANQAVRAGPFFELRGWPLRQDL 736
DP C V PFFCY *RYQRG++ + S*+*QN+PT QAVRAG LR L QD+
Sbjct: 474 DPCSCYVTPFFCYC*RYQRGEMPHSCTWS*N*QNIPTRIGQAVRAGSVL*LRDCSLCQDI 295
Query: 737 PWCGAWMEREIQ 772
PW +WM+ EIQ
Sbjct: 294 PWGFSWMDCEIQ 259
Score = 83.5 bits (176), Expect(3) = 1e-030
Identities = 44/85 (51%), Positives = 53/85 (62%)
Frame = -1 / +2
Query: 891 TRIITRQDAIAEFISDSC*TSRACPQRLPQHSSRQLRRRGCISRSIHAPHQGRS*RSGQP 712
T ++ +D F SC*TSR+ LPQHSS+ LR CIS+SIH QG S*+S Q
Sbjct: 140 TGVLRTKDR*FRFTVGSC*TSRSYVTGLPQHSSQHLRLHFCISQSIHEKPQGIS*QSEQS 319
Query: 711 LSSKKGPARTA*LAPVGTFCQSQLR 637
LS + PARTA* VG FCQ QL+
Sbjct: 320 LS*RTEPARTA*PILVGMFCQFQLQ 394
Score = 83.1 bits (175), Expect(2) = 2e-023
Identities = 53/113 (46%), Positives = 58/113 (51%)
Frame = +1 / -3
Query: 505 QGIAGVQRLLWSWQKLMRSRXXXXXXXXXXXXXISKRSSAQFLSSELRLTKCPHXXXXXX 684
Q IAGVQR L S +KLMRS ISKR +A L EL+LTK PH
Sbjct: 526 QVIAGVQRWLLS*RKLMRSMQLLCHTLLLLLLKISKR*NAP*LYLELKLTKHPHQNWSSS 347
Query: 685 XXXXFL*TQGLATSSRSSLVWRMDGA*DXXXXXQLP*RVLRKPLRTCSTGSTR 843
TQGL T SR SL + MDG *D Q+ *RVLRKP STG R
Sbjct: 346 SSRFCPLTQGLLTLSRYSLGFLMDGL*DTKVKTQVL*RVLRKPCHI*STGLAR 188
Score = 62.5 bits (130), Expect(2) = 5e-030
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +2 / -1
Query: 344 CGTRFLSWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWGSKGEGSVCCWSCR 508
CG RFL+WGS+CT*+ + + V K GK +*R KT Y S+ S+ CW CR
Sbjct: 687 CGARFLTWGSICT*KRRQTNTSVVKGACPGKSI*RGKTCYCCSQRTRSIYCWGCR 523
Score = 48.3 bits (99), Expect(3) = 1e-030
Identities = 23/35 (65%), Positives = 24/35 (68%)
Frame = -1 / +2
Query: 615 PL*YRQR*QKKGATAQQPGSHELLPTPQQPLHPSN 511
PL*Y Q+*QKKG T Q GSH L Q PLHPSN
Sbjct: 416 PL*YLQQ*QKKGVT*QLHGSH*LSLAQQPPLHPSN 520
Score = 46.4 bits (95), Expect(2) = 2e-039
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = -1 / +2
Query: 456 VLSLQTLFPEYVTLSTQERASQHSQVHKDPHERNLVPQ 343
VL LQ LFP + L+T + QVH DPH RNL PQ
Sbjct: 575 VLPLQMLFPGHAPLTTLVLVCRRFQVHMDPHVRNLAPQ 688
Score = 46.4 bits (95), Expect(2) = 2e-023
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +1 / -3
Query: 343 LWYQISFMGILMHLRMLRSPFLCG*SHILRKKGLKRQN 456
LW QIS+MGI M+L+ + CG* + R+K LKRQN
Sbjct: 688 LWCQISYMGIHMYLKTPTDQYKCG*RSMPREKHLKRQN 575
Score = 40.0 bits (81), Expect(3) = 1e-030
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -2 / +3
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHN 342
FK F R M L PH + + R I IPM EIW+HN
Sbjct: 585 FKCFSRGMLL*PHLYWSVGVFRYIWIPM*EIWHHN 689
>gb|BQ467934.1|BQ467934 HR01G10r HR Hordeum vulgare subsp. vulgare cDNA clone HR01G10
5-PRIME, mRNA sequence
Length = 549
Score = 292 bits (631), Expect = 3e-078
Identities = 118/173 (68%), Positives = 135/173 (78%)
Frame = +3 / +2
Query: 75 SALSSPPRVHDPRERERGRMASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKA 254
S + P +P GRMA+ QCC +PP LNPA G+GKVVDSFGG+ AYV+G +SKA
Sbjct: 29 SRIPPSPSPQEPAASALGRMATPQCCADPPTLNPAGGEGKVVDSFGGITAYVSGARESKA 208
Query: 255 AVVLVADVFGFEAPIMRNIADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPE 434
AVVL++DVFGFEAP +R IADKVASSGY VVVPDF HGDPY PEN ++P VW+K H P
Sbjct: 209 AVVLISDVFGFEAPNLRKIADKVASSGYLVVVPDFLHGDPYVPENADRPIQVWLKEHAPG 388
Query: 435 KGFEETKQVIGALKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFV 593
K FEE K VI ALKE+GVS VGAAGYCWGAKVV ELAKA+EI AAV+ HPSFV
Sbjct: 389 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAKVVAELAKANEIHAAVMSHPSFV 547
Score = 230 bits (496), Expect = 1e-059
Identities = 106/168 (63%), Positives = 115/168 (68%)
Frame = -3 / -1
Query: 595 VTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAPTADTPFSFRAPITCFVSSNPFSGVCDF 416
VTKEGC+ TAAWIS AFA+S TTFAPQQ PAAPT DTP S RA IT F SSN F G C F
Sbjct: 549 VTKEGCDITAAWISLAFASSATTFAPQQ*PAAPTVDTPCSLRAAITGFASSNAFPGACSF 370
Query: 415 IHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIGASNPKTSATRTTAALESSG 236
HT G S F GTTTKYPDEATLSA+FL GASNPKTS RTTAAL+S
Sbjct: 369 NHTCIGLSAFSGTYGSPCKKSGTTTKYPDEATLSAIFLRFGASNPKTSEMRTTAALDSRA 190
Query: 235 PAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAIRPLSLSLGSWTRG 92
P T A+ PPKLSTTLP P AG GG +QH +AI P + + GSW G
Sbjct: 189 PETYAVIPPKLSTTLPSPPAGLSVGGSAQHCGVAILPSAEAAGSWGLG 46
Score = 105 bits (223), Expect(2) = 1e-029
Identities = 51/105 (48%), Positives = 62/105 (59%)
Frame = -2 / -3
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH + + R I IPM EIW+HN + RS+F+GY+P RRF+ EDVG+
Sbjct: 400 FKCFSRGMLL*PHLYWSVGVFRYIWIPM*EIWHHN*ISRRSDFIGYLPQIRRFKPEDVGD 221
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E +PAEAV DLAL AG V+ RV AALR H
Sbjct: 220 EDDGGLGLSGAGDVRRDPAEAVHDLALAAGGVERRRVRAALRGSH 86
Score = 45.1 bits (92), Expect(2) = 1e-029
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = -2 / -3
Query: 593 NKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
NKRRV +S +DL+SF L N+LCTPAI C
Sbjct: 547 NKRRV*HNSCMDLISFR*LSNHLCTPAITC 458
>gb|AV932136.1|AV932136 AV932136 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2g20 5', mRNA sequence
Length = 622
Score = 290 bits (627), Expect = 1e-077
Identities = 117/172 (68%), Positives = 134/172 (77%)
Frame = +3 / +2
Query: 75 SALSSPPRVHDPRERERGRMASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKA 254
S + P +P GRMA+ QCC +PP LNPA G+GKVVDSFGG+ AYV+G +SKA
Sbjct: 107 SRIPPSPSPQEPAASALGRMATPQCCADPPTLNPAGGEGKVVDSFGGITAYVSGARESKA 286
Query: 255 AVVLVADVFGFEAPIMRNIADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPE 434
AVVL++DVFGFEAP +R IADKVASSGY VVVPDF HGDPY PEN ++P VW+K H P
Sbjct: 287 AVVLISDVFGFEAPNLRKIADKVASSGYLVVVPDFLHGDPYVPENADRPIQVWLKEHAPG 466
Query: 435 KGFEETKQVIGALKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSF 590
K FEE K VI ALKE+GVS VGAAGYCWGAKVV ELAKA+EI AAV+ HPSF
Sbjct: 467 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAKVVAELAKANEIHAAVMSHPSF 622
Score = 226 bits (487), Expect = 2e-058
Identities = 104/166 (62%), Positives = 113/166 (68%)
Frame = -3 / -2
Query: 589 KEGCNSTAAWIS*AFANSTTTFAPQQYPAAPTADTPFSFRAPITCFVSSNPFSGVCDFIH 410
KEGC+ TAAWIS AFA+S TTFAPQQ PAAPT DTP S RA IT F SSN F G C F H
Sbjct: 621 KEGCDITAAWISLAFASSATTFAPQQ*PAAPTVDTPCSLRAAITGFASSNAFPGACSFNH 442
Query: 409 TGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIGASNPKTSATRTTAALESSGPA 230
T G S F GTTTKYPDEATLSA+FL GASNPKTS RTTAAL+S P
Sbjct: 441 TCIGLSAFSGTYGSPCKKSGTTTKYPDEATLSAIFLRFGASNPKTSEMRTTAALDSRAPE 262
Query: 229 T*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAIRPLSLSLGSWTRG 92
T A+ PPKLSTTLP P AG GG +QH +AI P + + GSW G
Sbjct: 261 TYAVIPPKLSTTLPSPPAGLSVGGSAQHCGVAILPSAEAAGSWGLG 124
Score = 105 bits (223), Expect(2) = 9e-029
Identities = 51/105 (48%), Positives = 62/105 (59%)
Frame = -2 / -1
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH + + R I IPM EIW+HN + RS+F+GY+P RRF+ EDVG+
Sbjct: 478 FKCFSRGMLL*PHLYWSVGVFRYIWIPM*EIWHHN*ISRRSDFIGYLPQIRRFKPEDVGD 299
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E +PAEAV DLAL AG V+ RV AALR H
Sbjct: 298 EDDGGLGLSGAGDVRRDPAEAVHDLALAAGGVERRRVRAALRGSH 164
Score = 42.3 bits (86), Expect(2) = 9e-029
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = -2 / -1
Query: 590 KRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
KRRV +S +DL+SF L N+LCTPAI C
Sbjct: 622 KRRV*HNSCMDLISFR*LSNHLCTPAITC 536
>gb|BJ472055.1|BJ472055 BJ472055 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal31o24 5', mRNA sequence
Length = 596
Score = 290 bits (627), Expect = 1e-077
Identities = 117/172 (68%), Positives = 134/172 (77%)
Frame = +3 / +3
Query: 75 SALSSPPRVHDPRERERGRMASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKA 254
S + P +P GRMA+ QCC +PP LNPA G+GKVVDSFGG+ AYV+G +SKA
Sbjct: 81 SRIPPSPSPQEPAASALGRMATPQCCADPPTLNPAGGEGKVVDSFGGITAYVSGARESKA 260
Query: 255 AVVLVADVFGFEAPIMRNIADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPE 434
AVVL++DVFGFEAP +R IADKVASSGY VVVPDF HGDPY PEN ++P VW+K H P
Sbjct: 261 AVVLISDVFGFEAPNLRKIADKVASSGYLVVVPDFLHGDPYVPENADRPIQVWLKEHAPG 440
Query: 435 KGFEETKQVIGALKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSF 590
K FEE K VI ALKE+GVS VGAAGYCWGAKVV ELAKA+EI AAV+ HPSF
Sbjct: 441 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAKVVAELAKANEIHAAVMSHPSF 596
Score = 226 bits (487), Expect = 2e-058
Identities = 104/166 (62%), Positives = 113/166 (68%)
Frame = -3 / -2
Query: 589 KEGCNSTAAWIS*AFANSTTTFAPQQYPAAPTADTPFSFRAPITCFVSSNPFSGVCDFIH 410
KEGC+ TAAWIS AFA+S TTFAPQQ PAAPT DTP S RA IT F SSN F G C F H
Sbjct: 595 KEGCDITAAWISLAFASSATTFAPQQ*PAAPTVDTPCSLRAAITGFASSNAFPGACSFNH 416
Query: 409 TGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIGASNPKTSATRTTAALESSGPA 230
T G S F GTTTKYPDEATLSA+FL GASNPKTS RTTAAL+S P
Sbjct: 415 TCIGLSAFSGTYGSPCKKSGTTTKYPDEATLSAIFLRFGASNPKTSEMRTTAALDSRAPE 236
Query: 229 T*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAIRPLSLSLGSWTRG 92
T A+ PPKLSTTLP P AG GG +QH +AI P + + GSW G
Sbjct: 235 TYAVIPPKLSTTLPSPPAGLSVGGSAQHCGVAILPSAEAAGSWGLG 98
Score = 105 bits (223), Expect(2) = 9e-029
Identities = 51/105 (48%), Positives = 62/105 (59%)
Frame = -2 / -1
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH + + R I IPM EIW+HN + RS+F+GY+P RRF+ EDVG+
Sbjct: 452 FKCFSRGMLL*PHLYWSVGVFRYIWIPM*EIWHHN*ISRRSDFIGYLPQIRRFKPEDVGD 273
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E +PAEAV DLAL AG V+ RV AALR H
Sbjct: 272 EDDGGLGLSGAGDVRRDPAEAVHDLALAAGGVERRRVRAALRGSH 138
Score = 42.3 bits (86), Expect(2) = 9e-029
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = -2 / -1
Query: 590 KRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
KRRV +S +DL+SF L N+LCTPAI C
Sbjct: 596 KRRV*HNSCMDLISFR*LSNHLCTPAITC 510
>gb|BE214395.2|BE214395 HV_CEb0003F06f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003F06f, mRNA sequence
Length = 575
Score = 289 bits (625), Expect = 2e-077
Identities = 120/174 (68%), Positives = 137/174 (78%)
Frame = +3 / +3
Query: 132 MASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNI 311
MAS QCC NPP LNPA G+GKVVDSF G+KAYVAG ++SKAAVVL++DVFGF AP +R I
Sbjct: 51 MASPQCCANPPTLNPAAGEGKVVDSFSGIKAYVAGAQESKAAVVLISDVFGFGAPNLRKI 230
Query: 312 ADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVS 491
ADKVA+SGYFVV PDF HGDPY PE+ ++P VWIK HT K FEE K VI ALKE+ S
Sbjct: 231 ADKVAASGYFVVEPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQRAS 410
Query: 492 AVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEID 653
+VGAA Y WGAKV+ ELAKA+EIQ A + HPSFVT DDIKE KC +LGA D
Sbjct: 411 SVGAARYLWGAKVISELAKANEIQTAGMSHPSFVTGDDIKEGKCPNRVLGA*TD 572
Score = 205 bits (442), Expect = 4e-052
Identities = 99/171 (57%), Positives = 107/171 (62%)
Frame = -3 / -2
Query: 643 APRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAPTADTPFSFRAP 464
AP + H S ISS VTKEGC+ A WIS AFANS TFAP + AAPT D SFRA
Sbjct: 562 APSTRLGHFPSFISSPVTKEGCDIPAVWISLAFANSEITFAPHK*RAAPTLDALCSFRAA 383
Query: 463 ITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIGASN 284
IT F SSN F VC IHT G S G+TTKYPD ATLSA+FL GA N
Sbjct: 382 ITGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSGSTTKYPDAATLSAIFLRFGAPN 203
Query: 283 PKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAI 131
PKTS RTTAAL+S PAT AL P KLSTTLP P AG GG +QH LA+
Sbjct: 202 PKTSEMRTTAALDSWAPATYALIPLKLSTTLPSPAAGLSVGGFAQHCGLAM 50
Score = 104 bits (222), Expect(2) = 3e-029
Identities = 51/105 (48%), Positives = 63/105 (60%)
Frame = -2 / -1
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH +++ R I IPM+EIW HN++ RSNF+GY+P RR + EDVG+
Sbjct: 365 FKCFSRGMLLDPHCYWSVSVFRYIWIPMQEIWLHNEISRRSNFIGYLPQIRRSKPEDVGD 186
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E L+PAEAVDD AL G V+ V AALRA H
Sbjct: 185 ENYGGFGLLGAGHVRLDPAEAVDDFALAGGGVERRWVRAALRASH 51
Score = 44.6 bits (91), Expect(2) = 3e-029
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = -2 / -1
Query: 653 VNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
++LSS+ A LF I+ NKRR++ LDL+SF L + CTP I C
Sbjct: 572 ISLSSKYTIGAFPLFYIIASNKRRMRHTGCLDLISFR*L*DYFCTPQITC 423
>gb|AV919848.1|AV919848 AV919848 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7o08 3', mRNA sequence
Length = 671
Score = 287 bits (622), Expect = 6e-077
Identities = 114/165 (69%), Positives = 129/165 (78%)
Frame = +3 / -1
Query: 363 HGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVSAVGAAGYCWGAKVVVEL 542
HGDPY PE+ ++P VWIK HT K FEE K VI ALKE+G S+VGAAGYCWGAKVV EL
Sbjct: 668 HGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGASSVGAAGYCWGAKVVAEL 489
Query: 543 AKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSPPELIKQFEQVLSLNSGVGH 722
AKA+EIQ AV+ HPSFVTVDDIKEVKC I++LGAE D MSPPEL+K+FEQVLS NSG+ H
Sbjct: 488 AKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAH 309
Query: 723 FVKIFPGVAHGWSVRYNHXXXXXXXXXXXXXXXMLDWFNKNLK*T 857
FVKIFPGV+HGW+VRYN M+DWFNKNLK*T
Sbjct: 308 FVKIFPGVSHGWTVRYNGEDAAAVKSAEEALTDMIDWFNKNLK*T 174
Score = 194 bits (419), Expect = 6e-049
Identities = 91/162 (56%), Positives = 97/162 (59%)
Frame = -3 / +1
Query: 877 KAGCNCRVYFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKE 698
K G +V+ RFLLNQS M S LYLT+HP TPGKILTK PE +
Sbjct: 154 KGGPLIQVHLRFLLNQSIMSVRASSALFTAAASSPLYLTVHP*ETPGKILTK*AIPELDD 333
Query: 697 RTCSNCXXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAP 518
RTCSN SAP + H TS ISSTVTKEGC+ TA WIS AFANS TTFAP
Sbjct: 334 RTCSNSLTNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSATTFAP 513
Query: 517 QQYPAAPTADTPFSFRAPITCFVSSNPFSGVCDFIHTGKGFS 392
QQ PAAPT D P SFRA IT F SSN F VC IHT G S
Sbjct: 514 QQ*PAAPTLDAPCSFRAAITGFASSNAFPAVCSLIHTAIGLS 639
Score = 74.4 bits (156), Expect(2) = 4e-025
Identities = 49/113 (43%), Positives = 57/113 (50%)
Frame = +1 / -2
Query: 505 QGIAGVQRLLWSWQKLMRSRXXXXXXXXXXXXXISKRSSAQFLSSELRLTKCPHXXXXXX 684
Q I GVQR S +KLMRSR I KR +A L EL+L CPH
Sbjct: 526 QVIVGVQR*SQS*RKLMRSRQPLCRILLLLLSMI*KR*NAPSLYLELKLM*CPHQNWSRS 347
Query: 685 XXXXFL*TQGLATSSRSSLVWRMDGA*DXXXXXQLP*RVLRKPLRTCSTGSTR 843
+ TQGL T SRSSL + MDG *D +L *R R+P +T TG TR
Sbjct: 346 SSRFYHLTQGLLTLSRSSLGFLMDGP*DIMAKMRLL*RAPRRP*QT*LTGLTR 188
Score = 68.9 bits (144), Expect(3) = 8e-029
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = -2 / +3
Query: 848 QILVEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQ 702
++LV+PV HV +G L L+ S + ++SH PSMR+ REDLD+V+NP*V+
Sbjct: 183 EVLVKPVNHVCQGLLGALYSSRIFAIISHGPSMRNPREDLDKVSNP*VR 329
Score = 61.1 bits (127), Expect(3) = 8e-029
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2 / +3
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 366 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 527
Score = 60.6 bits (126), Expect(2) = 4e-025
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +2 / -3
Query: 362 SWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWGSKGEGSVCCWSCR 508
+WGS+CT* *+ S VD+ Y GK +*R K Y SKG SV CW CR
Sbjct: 669 AWGSICT*RR*QTNSSVDQGAYRGKSI*RGKACYRCSKGTRSV*CWGCR 523
Score = 35.4 bits (71), Expect(3) = 8e-029
Identities = 16/30 (53%), Positives = 16/30 (53%)
Frame = -1 / +2
Query: 453 LSLQTLFPEYVTLSTQERASQHSQVHKDPH 364
L LQ LFP Y ST Q QVH DPH
Sbjct: 578 LPLQMLFPRYAP*STLLLVCQRLQVHMDPH 667
>gb|AV932651.1|AV932651 AV932651 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal1i11 5', mRNA sequence
Length = 589
Score = 286 bits (620), Expect = 1e-076
Identities = 116/166 (69%), Positives = 131/166 (78%)
Frame = +3 / +2
Query: 93 PRVHDPRERERGRMASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVA 272
P P GRMA+ QCC +PP LNPA G+GKVVDSFGG+ AYV+G +SKAAVVL++
Sbjct: 92 PVPRXPAASALGRMATPQCCADPPTLNPAGGEGKVVDSFGGITAYVSGARESKAAVVLIS 271
Query: 273 DVFGFEAPIMRNIADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEET 452
DVFGFEAP +R IADKVASSGY VVVPDF HGDPY PEN ++P VW+K H P K FEE
Sbjct: 272 DVFGFEAPNLRKIADKVASSGYLVVVPDFLHGDPYVPENADRPIQVWLKEHAPGKAFEEA 451
Query: 453 KQVIGALKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSF 590
K VI ALKE+GVS VGAAGYCWGAKVV ELAKA+EI AAV+ HPSF
Sbjct: 452 KPVIAALKEQGVSTVGAAGYCWGAKVVAELAKANEIHAAVMSHPSF 589
Score = 218 bits (470), Expect = 5e-056
Identities = 101/161 (62%), Positives = 110/161 (68%)
Frame = -3 / -2
Query: 589 KEGCNSTAAWIS*AFANSTTTFAPQQYPAAPTADTPFSFRAPITCFVSSNPFSGVCDFIH 410
KEGC+ TAAWIS AFA+S TTFAPQQ PAAPT DTP S RA IT F SSN F G C F H
Sbjct: 588 KEGCDITAAWISLAFASSATTFAPQQ*PAAPTVDTPCSLRAAITGFASSNAFPGACSFNH 409
Query: 409 TGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIGASNPKTSATRTTAALESSGPA 230
T G S F GTTTKYPDEATLSA+FL GASNPKTS RTTAAL+S P
Sbjct: 408 TCIGLSAFSGTYGSPCKKSGTTTKYPDEATLSAIFLRFGASNPKTSEMRTTAALDSRAPE 229
Query: 229 T*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAIRPLSLSLG 107
T A+ PPKLSTTLP P AG GG +QH +AI P + + G
Sbjct: 228 TYAVIPPKLSTTLPSPPAGLSVGGSAQHCGVAILPSAEAAG 106
Score = 105 bits (223), Expect(2) = 9e-029
Identities = 51/105 (48%), Positives = 62/105 (59%)
Frame = -2 / -1
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH + + R I IPM EIW+HN + RS+F+GY+P RRF+ EDVG+
Sbjct: 445 FKCFSRGMLL*PHLYWSVGVFRYIWIPM*EIWHHN*ISRRSDFIGYLPQIRRFKPEDVGD 266
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E +PAEAV DLAL AG V+ RV AALR H
Sbjct: 265 EDDGGLGLSGAGDVRRDPAEAVHDLALAAGGVERRRVRAALRGSH 131
Score = 42.3 bits (86), Expect(2) = 9e-029
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = -2 / -1
Query: 590 KRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
KRRV +S +DL+SF L N+LCTPAI C
Sbjct: 589 KRRV*HNSCMDLISFR*LSNHLCTPAITC 503
>gb|BQ464865.1|BQ464865 HU01O19T HU Hordeum vulgare subsp. vulgare cDNA clone HU01O19
5-PRIME, mRNA sequence
Length = 613
Score = 284 bits (614), Expect = 7e-076
Identities = 118/174 (67%), Positives = 136/174 (78%)
Frame = +3 / +1
Query: 159 PPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNIADKVASSGY 338
P P +G+ KAYVAG ++SKAAVVL++DVFGF AP +R IADKVA+SGY
Sbjct: 91 PTDAQPRRRRGQGRRQLRRFKAYVAGAQESKAAVVLISDVFGFGAPNLRKIADKVAASGY 270
Query: 339 FVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVSAVGAAGYCW 518
FVVVPDF HGDPY PE+ ++P VWIK HT K FEE K VI ALKE+G S+VGAAGYCW
Sbjct: 271 FVVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGASSVGAAGYCW 450
Query: 519 GAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSPPELIK 680
GAKVV ELAKA+EIQ AV+ HPSFVTVDDIKEVKC I++LGAE D MSPPEL+K
Sbjct: 451 GAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSPPELVK 612
Score = 194 bits (419), Expect(2) = 2e-053
Identities = 91/142 (64%), Positives = 95/142 (66%)
Frame = -3 / -3
Query: 643 APRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAPTADTPFSFRAP 464
AP + H TS ISSTVTKEGC+ TA WIS AFANS TTFAPQQ PAAPT D P SFRA
Sbjct: 575 APSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSATTFAPQQ*PAAPTLDAPCSFRAA 396
Query: 463 ITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIGASN 284
IT F SSN F VC IHT G S GTTTKYPD ATLSA+FL GA N
Sbjct: 395 ITGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPN 216
Query: 283 PKTSATRTTAALESSGPAT*AL 218
PKTS RTTAAL+S PAT AL
Sbjct: 215 PKTSEMRTTAALDSWAPATYAL 150
Score = 90.0 bits (190), Expect(3) = 7e-035
Identities = 40/73 (54%), Positives = 47/73 (64%)
Frame = +2 / +3
Query: 290 SADYEEHSRQSCFVRVLCCGTRFLSWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWG 469
SA+ EE SR SC V + CG RFL+WGS+CT* *+ S VD+ Y GK +*R K Y
Sbjct: 222 SAESEEDSR*SCCVWIFRCGARFLAWGSICT*RR*QTNSSVDQGAYRGKSI*RGKACYRC 401
Query: 470 SKGEGSVCCWSCR 508
SKG SV CW CR
Sbjct: 402 SKGTRSV*CWGCR 440
Score = 77.6 bits (163), Expect(2) = 4e-026
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = -2 / -2
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH +++ R I IPM+EIW+HN++ RSNF+GY+P RR + EDVG+
Sbjct: 378 FKCFSRGMLLDPHCYWSVSVFRYIWIPMQEIWHHNEISRRSNFIGYLPQIRRSKPEDVGD 199
Query: 266 E 264
E
Sbjct: 198 E 196
Score = 61.1 bits (127), Expect(2) = 4e-026
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2 / -2
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 597 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 436
Score = 58.8 bits (122), Expect(3) = 7e-035
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +3 / +2
Query: 132 MASSQCCDNPPALNPACGKGKVVDSFG 212
MAS QCC NPP LNPA G+GKVVDSFG
Sbjct: 65 MASPQCCANPPTLNPAAGEGKVVDSFG 145
Score = 51.9 bits (107), Expect(3) = 2e-021
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = -1 / -1
Query: 453 LSLQTLFPEYVTLSTQERASQHSQVHKDPHERNLVPQQSTLTKQ 322
L LQ LFP Y ST Q QVH DPH RNL PQ++ T+Q
Sbjct: 385 LPLQMLFPRYAP*STLLLVCQRLQVHMDPHARNLAPQRNIQTQQ 254
Score = 44.1 bits (90), Expect(3) = 2e-021
Identities = 23/56 (41%), Positives = 26/56 (46%)
Frame = -3 / -2
Query: 298 IGASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAI 131
I S P+ L G L PKLSTTLP P AG GG +QH LA+
Sbjct: 231 IRRSKPEDVGDENYGGLGLLGAGDVRLETPKLSTTLPSPAAGLSVGGFAQHCGLAM 64
Score = 44.1 bits (90), Expect(3) = 2e-021
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = -1 / -1
Query: 666 VGTFCQSQLRG*KLRT*PL*YRQR*QKKGATAQQPGSHELLPTPQQPLHPSN 511
VGT Q QL+ + PL Y ++*QKK AT + GSH L T + PLHP+N
Sbjct: 598 VGTSHQFQLQVQRWGISPLLYHRQ*QKKDAT*RLSGSH*LSLTLRLPLHPNN 443
Score = 37.3 bits (75), Expect(3) = 7e-035
Identities = 24/54 (44%), Positives = 27/54 (50%)
Frame = +1 / +2
Query: 505 QGIAGVQRLLWSWQKLMRSRXXXXXXXXXXXXXISKRSSAQFLSSELRLTKCPH 666
Q I GVQR S +KLMRSR I KR +A L EL+L CPH
Sbjct: 437 QVIVGVQR*SQS*RKLMRSRQPLCRILLLLLSMI*KR*NAPSLYLELKLM*CPH 598
Score = 35.4 bits (71), Expect(2) = 2e-053
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = -2 / -1
Query: 212 AEAVDDLALPAGRVQGWRVIAALRARH 132
AEAVDDLAL G V+ V AALRA H
Sbjct: 145 AEAVDDLALAGGGVERRWVRAALRASH 65
>gb|AV935828.1|AV935828 AV935828 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6j21 3', mRNA sequence
Length = 648
Score = 265 bits (573), Expect = 3e-070
Identities = 107/154 (69%), Positives = 120/154 (77%)
Frame = +3 / -3
Query: 396 KPFPVWIKSHTPEKGFEETKQVIGALKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVL 575
+P VWIK HT K FEE K VI ALKE+G S+VGAAGYCWGAKVV ELAKA+EIQ AV+
Sbjct: 646 RPIAVWIKEHTAGKAFEEAKPVIAALKEQGASSVGAAGYCWGAKVVAELAKANEIQTAVM 467
Query: 576 LHPSFVTVDDIKEVKCAISILGAEIDKMSPPELIKQFEQVLSLNSGVGHFVKIFPGVAHG 755
HPSFVTVDDIKEVKC I++LGAE D MSPPEL+K+FEQVLS NSG+ HFVKIFPGV+HG
Sbjct: 466 SHPSFVTVDDIKEVKCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHG 287
Query: 756 WSVRYNHXXXXXXXXXXXXXXXMLDWFNKNLK*T 857
W+VRYN M+DWFNKNLK*T
Sbjct: 286 WTVRYNGEDAAAVKSAEEALTDMIDWFNKNLK*T 185
Score = 193 bits (415), Expect = 2e-048
Identities = 90/160 (56%), Positives = 96/160 (60%)
Frame = -3 / +3
Query: 877 KAGCNCRVYFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKE 698
K G +V+ RFLLNQS M S LYLT+HP TPGKILTK PE +
Sbjct: 165 KGGPLIQVHLRFLLNQSIMSVRASSALFTAAASSPLYLTVHP*ETPGKILTK*AIPELDD 344
Query: 697 RTCSNCXXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAP 518
RTCSN SAP + H TS ISSTVTKEGC+ TA WIS AFANS TTFAP
Sbjct: 345 RTCSNSLTNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSATTFAP 524
Query: 517 QQYPAAPTADTPFSFRAPITCFVSSNPFSGVCDFIHTGKG 398
QQ PAAPT D P SFRA IT F SSN F VC IHT G
Sbjct: 525 QQ*PAAPTLDAPCSFRAAITGFASSNAFPAVCSLIHTAIG 644
Score = 68.9 bits (144), Expect(2) = 1e-023
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = -2 / +2
Query: 848 QILVEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQ 702
++LV+PV HV +G L L+ S + ++SH PSMR+ REDLD+V+NP*V+
Sbjct: 194 EVLVKPVNHVCQGLLGALYSSRIFAIISHGPSMRNPREDLDKVSNP*VR 340
Score = 61.1 bits (127), Expect(2) = 1e-023
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2 / +2
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 377 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 538
>gb|AV914749.1|AV914749 AV914749 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7o08 5', mRNA sequence
Length = 599
Score = 255 bits (552), Expect = 3e-067
Identities = 101/136 (74%), Positives = 114/136 (83%)
Frame = +3 / +1
Query: 132 MASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNI 311
MAS QCC NPP LNPA G+GKVVDSFGG+KAYVAG ++SKAAVVL++DVFGF AP +R I
Sbjct: 190 MASPQCCANPPTLNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAPNLRKI 369
Query: 312 ADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVS 491
ADKVA+SGYFVVVPDF HGDPY PE+ ++P VWIK HT K FEE K VI ALKE+G S
Sbjct: 370 ADKVAASGYFVVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGAS 549
Query: 492 AVGAAGYCWGAKVVVE 539
+VGAAGYCWGAKVV E
Sbjct: 550 SVGAAGYCWGAKVVAE 597
Score = 182 bits (393), Expect = 2e-045
Identities = 86/137 (62%), Positives = 90/137 (65%)
Frame = -3 / -1
Query: 541 NSTTTFAPQQYPAAPTADTPFSFRAPITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXX 362
NS TTFAPQQ PAAPT D P SFRA IT F SSN F VC IHT G S
Sbjct: 599 NSATTFAPQQ*PAAPTLDAPCSFRAAITGFASSNAFPAVCSLIHTAIGLSASSGTYGSPC 420
Query: 361 XXXGTTTKYPDEATLSAMFLIIGASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLPFP 182
GTTTKYPD ATLSA+FL GA NPKTS RTTAAL+S PAT AL PPKLSTTLP P
Sbjct: 419 KKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYALIPPKLSTTLPSP 240
Query: 181 QAGFRAGGLSQH*ELAI 131
AG GG +QH LA+
Sbjct: 239 AAGLSVGGFAQHCGLAM 189
Score = 107 bits (229), Expect = 9e-023
Identities = 52/105 (49%), Positives = 65/105 (61%)
Frame = -2 / -3
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH +++ R I IPM+EIW+HN++ RSNF+GY+P RR + EDVG+
Sbjct: 504 FKCFSRGMLLDPHCYWSVSVFRYIWIPMQEIWHHNEISRRSNFIGYLPQIRRSKPEDVGD 325
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E L+PAEAVDDLAL G V+ V AALRA H
Sbjct: 324 ENYGGLGLLGAGDVRLDPAEAVDDLALAGGGVERRWVRAALRASH 190
>gb|BG300031.1|BG300031 HVSMEb0011B11f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0011B11f, mRNA sequence
Length = 533
Score = 247 bits (533), Expect = 1e-064
Identities = 98/150 (65%), Positives = 113/150 (75%)
Frame = +3 / +3
Query: 75 SALSSPPRVHDPRERERGRMASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKA 254
S + P +P GRMA+ QCC +PP LNPA G+GKVVDSFGG+ AYV+G +SKA
Sbjct: 84 SRIPPSPSPQEPAASALGRMATPQCCADPPTLNPAGGEGKVVDSFGGITAYVSGARESKA 263
Query: 255 AVVLVADVFGFEAPIMRNIADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPE 434
AVVL++DVFGFEAP +R IADKVASSGY VV PDF HGDPY PEN ++P VW+K H P
Sbjct: 264 AVVLISDVFGFEAPNLRKIADKVASSGYLVVAPDFLHGDPYVPENADRPIQVWLKEHAPG 443
Query: 435 KGFEETKQVIGALKEKGVSAVGAAGYCWGA 524
K FEE K VI ALKE+GVS VGAA YCWGA
Sbjct: 444 KAFEEAKPVIAALKEQGVSTVGAARYCWGA 533
Score = 179 bits (386), Expect = 2e-044
Identities = 85/144 (59%), Positives = 92/144 (63%)
Frame = -3 / -2
Query: 523 APQQYPAAPTADTPFSFRAPITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTT 344
APQQ AAPT DTP S RA IT F SSN F G C F HT G S F G T
Sbjct: 532 APQQ*RAAPTVDTPCSLRAAITGFASSNAFPGACSFNHTCIGLSAFSGTYGSPCKKSGAT 353
Query: 343 TKYPDEATLSAMFLIIGASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRA 164
TKYPDEATLSA+FL GASNPKTS RTTAAL+S P T A+ PPKLSTTLP P AG
Sbjct: 352 TKYPDEATLSAIFLRFGASNPKTSEMRTTAALDSRAPETYAVIPPKLSTTLPSPPAGLSV 173
Query: 163 GGLSQH*ELAIRPLSLSLGSWTRG 92
GG +QH +AI P + + GSW G
Sbjct: 172 GGSAQHCGVAILPSAEAAGSWGLG 101
Score = 103 bits (219), Expect = 2e-021
Identities = 51/105 (48%), Positives = 61/105 (58%)
Frame = -2 / -1
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH + + R I IPM EIW HN + RS+F+GY+P RRF+ EDVG+
Sbjct: 455 FKCFSRGMLL*PHLYWSVGVFRYIWIPM*EIWRHN*ISRRSDFIGYLPQIRRFKPEDVGD 276
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E +PAEAV DLAL AG V+ RV AALR H
Sbjct: 275 EDDGGLGLSGAGDVRRDPAEAVHDLALAAGGVERRRVRAALRGSH 141
>gb|BE602191.1|BE602191 HVSMEh0102O23f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102O23f, mRNA sequence
Length = 733
Score = 241 bits (521), Expect = 5e-063
Identities = 98/139 (70%), Positives = 110/139 (79%)
Frame = +3 / -3
Query: 441 FEETKQVIGALKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVK 620
FEE K VI ALK +G S+VGAAGYCWGAKVV ELAKA+EIQ AV+ HPSFVTVDDIKEVK
Sbjct: 728 FEEAKPVIAALKNQGASSVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVK 549
Query: 621 CAISILGAEIDKMSPPELIKQFEQVLSLNSGVGHFVKIFPGVAHGWSVRYNHXXXXXXXX 800
C I++LGAE D MSPPEL+K+FEQVLS NSG+ HFVKIFPGV+HGW+VRYN
Sbjct: 548 CPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGEDAAAVKS 369
Query: 801 XXXXXXXMLDWFNKNLK*T 857
M+DWFNKNLK*T
Sbjct: 368 AEEALTDMIDWFNKNLK*T 312
Score = 174 bits (375), Expect = 7e-043
Identities = 82/146 (56%), Positives = 89/146 (60%)
Frame = -3 / +1
Query: 877 KAGCNCRVYFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKE 698
K G +V+ RFLLNQS M S LYLT+HP TPGKILTK PE +
Sbjct: 292 KGGPLIQVHLRFLLNQSIMSVRASSALFTAAASSPLYLTVHP*ETPGKILTK*AIPELDD 471
Query: 697 RTCSNCXXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAP 518
RTCSN SAP + H TS ISSTVTKEGC+ TA WIS AFANS TTFAP
Sbjct: 472 RTCSNSLTNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSATTFAP 651
Query: 517 QQYPAAPTADTPFSFRAPITCFVSSN 440
QQ PAAPT D P+ FRA IT F SSN
Sbjct: 652 QQ*PAAPTLDAPWFFRAAITGFASSN 729
Score = 68.9 bits (144), Expect(2) = 1e-023
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = -2 / +3
Query: 848 QILVEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQ 702
++LV+PV HV +G L L+ S + ++SH PSMR+ REDLD+V+NP*V+
Sbjct: 321 EVLVKPVNHVCQGLLGALYSSRIFAIISHGPSMRNPREDLDKVSNP*VR 467
Score = 61.1 bits (127), Expect(2) = 1e-023
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2 / +3
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 504 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 665
>gb|BU996421.1|BU996421 HM13I21r HM Hordeum vulgare subsp. vulgare cDNA clone HM13I21
5-PRIME, mRNA sequence
Length = 641
Score = 240 bits (518), Expect = 1e-062
Identities = 98/140 (70%), Positives = 111/140 (79%)
Frame = +3 / +3
Query: 435 KGFEETKQVIGALKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKE 614
K FEE K VI ALKE+GVS VGAAGYCWGAKVV ELAKA+EI AAV+ HPSFVTV+DIKE
Sbjct: 165 KAFEEAKPVIAALKEQGVSTVGAAGYCWGAKVVAELAKANEIHAAVMSHPSFVTVEDIKE 344
Query: 615 VKCAISILGAEIDKMSPPELIKQFEQVLSLNSGVGHFVKIFPGVAHGWSVRYNHXXXXXX 794
VKC I++LGAEIDK SPPEL+KQFEQVLS NSG+ HFVKIFPGV+HGW+VRY
Sbjct: 345 VKCPIAVLGAEIDKTSPPELVKQFEQVLSSNSGIAHFVKIFPGVSHGWTVRYKSEDAGAV 524
Query: 795 XXXXXXXXXMLDWFNKNLK* 854
M+DWF+KNL+*
Sbjct: 525 KSAEEALSHMIDWFSKNLQ* 584
Score = 176 bits (379), Expect = 2e-043
Identities = 81/142 (57%), Positives = 91/142 (64%)
Frame = -3 / -2
Query: 859 RVYFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKERTCSNC 680
+++ RFLLNQS + S LYLT+HP TPG ILTK PE ++RTCSNC
Sbjct: 589 QIHCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*AIPELEDRTCSNC 410
Query: 679 XXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAA 500
SAP + H TSLISSTVTKEGC+ TAAWIS AFA+S TTFAPQQ PAA
Sbjct: 409 LTNSGGDVLSISAPSTAMGHFTSLISSTVTKEGCDITAAWISLAFASSATTFAPQQ*PAA 230
Query: 499 PTADTPFSFRAPITCFVSSNPF 434
PT DTP S RA IT F SSN F
Sbjct: 229 PTVDTPCSLRAAITGFASSNAF 164
Score = 137 bits (293), Expect = 1e-031
Identities = 61/114 (53%), Positives = 78/114 (68%)
Frame = -2 / -1
Query: 845 ILVEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQRKXXXXXXXXLR 666
+L +PV+H+ +GFLSTLH +CV VSH+PSMR+ RE LD+V+NP*V+ +
Sbjct: 575 VLAKPVDHM*QGFLSTLHSTCVFTFVSHSPSMRNPREYLDKVSNP*VRGQNLLELLDQFW 396
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WG FVN SS+ A LFDI N NKRRV +S +DL+SF L N+LCTPAI C
Sbjct: 395 WGCFVNFSSKYSYGAFHLFDIFNSNKRRV*HNSCMDLISFR*LSNHLCTPAITC 234
Score = 89.0 bits (188), Expect(2) = 1e-022
Identities = 40/72 (55%), Positives = 48/72 (66%)
Frame = +2 / +2
Query: 557 DPGCCAVAPFFCYR*RYQRGQVRNFYPRS*D*QNVPTGANQAVRAGPFFELRGWPLRQDL 736
DP C V PFFCY *RYQRG++ + S*+*QN+PT QAVRAG LR L QD+
Sbjct: 287 DPCSCYVTPFFCYC*RYQRGEMPHSCTWS*N*QNIPTRIGQAVRAGSVL*LRDCSLCQDI 466
Query: 737 PWCGAWMEREIQ 772
PW +WM+ EIQ
Sbjct: 467 PWGFSWMDCEIQ 502
Score = 83.5 bits (176), Expect(2) = 4e-024
Identities = 44/85 (51%), Positives = 53/85 (62%)
Frame = -1 / -3
Query: 891 TRIITRQDAIAEFISDSC*TSRACPQRLPQHSSRQLRRRGCISRSIHAPHQGRS*RSGQP 712
T ++ +D F SC*TSR+ LPQHSS+ LR CIS+SIH QG S*+S Q
Sbjct: 621 TGVLRTKDR*FRFTVGSC*TSRSYVTGLPQHSSQHLRLHFCISQSIHEKPQGIS*QSEQS 442
Query: 711 LSSKKGPARTA*LAPVGTFCQSQLR 637
LS + PARTA* VG FCQ QL+
Sbjct: 441 LS*RTEPARTA*PILVGMFCQFQLQ 367
Score = 48.3 bits (99), Expect(2) = 4e-024
Identities = 23/35 (65%), Positives = 24/35 (68%)
Frame = -1 / -3
Query: 615 PL*YRQR*QKKGATAQQPGSHELLPTPQQPLHPSN 511
PL*Y Q+*QKKG T Q GSH L Q PLHPSN
Sbjct: 345 PL*YLQQ*QKKGVT*QLHGSH*LSLAQQPPLHPSN 241
Score = 37.7 bits (76), Expect(2) = 1e-022
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2 / +2
Query: 425 YSGKRV*RDKTSYWGSKGEGSVCCWSCR 508
Y+GK +*R KT Y S+ S+ CW CR
Sbjct: 155 YTGKSI*RGKTCYCCSQRTRSIYCWGCR 238
>gb|AV932602.1|AV932602 AV932602 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal1f07 5', mRNA sequence
Length = 516
Score = 239 bits (517), Expect = 2e-062
Identities = 96/141 (68%), Positives = 109/141 (77%)
Frame = +3 / +2
Query: 93 PRVHDPRERERGRMASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVA 272
P P GRMA+ QCC +PP LNPA G+GKVVDSFGG+ AYV+G +SKAAVVL++
Sbjct: 92 PVPRXPAASALGRMATPQCCADPPTLNPAGGEGKVVDSFGGITAYVSGARESKAAVVLIS 271
Query: 273 DVFGFEAPIMRNIADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEET 452
DVFGFEAP +R IADKVASSGY VVVPDF HGDPY PEN ++P VW+K H P K FEE
Sbjct: 272 DVFGFEAPNLRKIADKVASSGYLVVVPDFLHGDPYVPENADRPIQVWLKEHAPGKAFEEA 451
Query: 453 KQVIGALKEKGVSAVGAAGYC 515
K VI ALKE+GVS VGAAGYC
Sbjct: 452 KPVIAALKEQGVSTVGAAGYC 514
Score = 173 bits (372), Expect = 2e-042
Identities = 82/137 (59%), Positives = 89/137 (64%)
Frame = -3 / -1
Query: 517 QQYPAAPTADTPFSFRAPITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTTK 338
QQ PAAPT DTP S RA IT F SSN F G C F HT G S F GTTTK
Sbjct: 516 QQ*PAAPTVDTPCSLRAAITGFASSNAFPGACSFNHTCIGLSAFSGTYGSPCKKSGTTTK 337
Query: 337 YPDEATLSAMFLIIGASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAGG 158
YPDEATLSA+FL GASNPKTS RTTAAL+S P T A+ PPKLSTTLP P AG GG
Sbjct: 336 YPDEATLSAIFLRFGASNPKTSEMRTTAALDSRAPETYAVIPPKLSTTLPSPPAGLSVGG 157
Query: 157 LSQH*ELAIRPLSLSLG 107
+QH +AI P + + G
Sbjct: 156 SAQHCGVAILPSAEAAG 106
Score = 105 bits (223), Expect = 6e-022
Identities = 51/105 (48%), Positives = 62/105 (59%)
Frame = -2 / -3
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH + + R I IPM EIW+HN + RS+F+GY+P RRF+ EDVG+
Sbjct: 445 FKCFSRGMLL*PHLYWSVGVFRYIWIPM*EIWHHN*ISRRSDFIGYLPQIRRFKPEDVGD 266
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E +PAEAV DLAL AG V+ RV AALR H
Sbjct: 265 EDDGGLGLSGAGDVRRDPAEAVHDLALAAGGVERRRVRAALRGSH 131
>gb|AV921854.1|AV921854 AV921854 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13h19 3', mRNA sequence
Length = 628
Score = 234 bits (506), Expect = 6e-061
Identities = 95/133 (71%), Positives = 107/133 (80%)
Frame = +3 / -3
Query: 459 VIGALKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISIL 638
VI ALKE+G S+VGAAGYCWGAKVV ELAKA+EIQ AV+ HPSFVTVDDIKEVKC I++L
Sbjct: 623 VIAALKEQGASSVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVL 444
Query: 639 GAEIDKMSPPELIKQFEQVLSLNSGVGHFVKIFPGVAHGWSVRYNHXXXXXXXXXXXXXX 818
GAE D MSPPEL+K+FEQVLS NSG+ HFVKIFPGV+HGW+VRYN
Sbjct: 443 GAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGEDAAAVKSAEEALT 264
Query: 819 XMLDWFNKNLK*T 857
M+DWFNKNLK*T
Sbjct: 263 DMIDWFNKNLK*T 225
Score = 168 bits (361), Expect = 6e-041
Identities = 79/140 (56%), Positives = 85/140 (60%)
Frame = -3 / +1
Query: 877 KAGCNCRVYFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKE 698
K G +V+ RFLLNQS M S LYLT+HP TPGKILTK PE +
Sbjct: 205 KGGPLIQVHLRFLLNQSIMSVRASSALFTAAASSPLYLTVHP*ETPGKILTK*AIPELDD 384
Query: 697 RTCSNCXXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAP 518
RTCSN SAP + H TS ISSTVTKEGC+ TA WIS AFANS TTFAP
Sbjct: 385 RTCSNSLTNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSATTFAP 564
Query: 517 QQYPAAPTADTPFSFRAPIT 458
QQ PAAPT D P SFRA IT
Sbjct: 565 QQ*PAAPTLDAPCSFRAAIT 624
Score = 68.9 bits (144), Expect(2) = 1e-023
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = -2 / +3
Query: 848 QILVEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQ 702
++LV+PV HV +G L L+ S + ++SH PSMR+ REDLD+V+NP*V+
Sbjct: 234 EVLVKPVNHVCQGLLGALYSSRIFAIISHGPSMRNPREDLDKVSNP*VR 380
Score = 61.1 bits (127), Expect(2) = 1e-023
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2 / +3
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 417 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 578
>gb|AV936314.1|AV936314 AV936314 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal10o04 3', mRNA sequence
Length = 614
Score = 234 bits (506), Expect = 6e-061
Identities = 95/133 (71%), Positives = 107/133 (80%)
Frame = +3 / -3
Query: 459 VIGALKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISIL 638
VI ALKE+G S+VGAAGYCWGAKVV ELAKA+EIQ AV+ HPSFVTVDDIKEVKC I++L
Sbjct: 609 VIAALKEQGASSVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVL 430
Query: 639 GAEIDKMSPPELIKQFEQVLSLNSGVGHFVKIFPGVAHGWSVRYNHXXXXXXXXXXXXXX 818
GAE D MSPPEL+K+FEQVLS NSG+ HFVKIFPGV+HGW+VRYN
Sbjct: 429 GAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGEDAAAVKSAEEALT 250
Query: 819 XMLDWFNKNLK*T 857
M+DWFNKNLK*T
Sbjct: 249 DMIDWFNKNLK*T 211
Score = 168 bits (361), Expect = 6e-041
Identities = 79/140 (56%), Positives = 85/140 (60%)
Frame = -3 / +2
Query: 877 KAGCNCRVYFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKE 698
K G +V+ RFLLNQS M S LYLT+HP TPGKILTK PE +
Sbjct: 191 KGGPLIQVHLRFLLNQSIMSVRASSALFTAAASSPLYLTVHP*ETPGKILTK*AIPELDD 370
Query: 697 RTCSNCXXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAP 518
RTCSN SAP + H TS ISSTVTKEGC+ TA WIS AFANS TTFAP
Sbjct: 371 RTCSNSLTNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSATTFAP 550
Query: 517 QQYPAAPTADTPFSFRAPIT 458
QQ PAAPT D P SFRA IT
Sbjct: 551 QQ*PAAPTLDAPCSFRAAIT 610
Score = 68.9 bits (144), Expect(2) = 1e-023
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = -2 / +1
Query: 848 QILVEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQ 702
++LV+PV HV +G L L+ S + ++SH PSMR+ REDLD+V+NP*V+
Sbjct: 220 EVLVKPVNHVCQGLLGALYSSRIFAIISHGPSMRNPREDLDKVSNP*VR 366
Score = 61.1 bits (127), Expect(2) = 1e-023
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2 / +1
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 403 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 564
>gb|BQ663284.1|BQ663284 HU01O19w HU Hordeum vulgare subsp. vulgare cDNA clone HU01O19
3-PRIME, mRNA sequence
Length = 627
Score = 234 bits (506), Expect = 6e-061
Identities = 95/133 (71%), Positives = 107/133 (80%)
Frame = +3 / -1
Query: 459 VIGALKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISIL 638
VI ALKE+G S+VGAAGYCWGAKVV ELAKA+EIQ AV+ HPSFVTVDDIKEVKC I++L
Sbjct: 627 VIAALKEQGASSVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVL 448
Query: 639 GAEIDKMSPPELIKQFEQVLSLNSGVGHFVKIFPGVAHGWSVRYNHXXXXXXXXXXXXXX 818
GAE D MSPPEL+K+FEQVLS NSG+ HFVKIFPGV+HGW+VRYN
Sbjct: 447 GAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGEDAAAVKSAEEALT 268
Query: 819 XMLDWFNKNLK*T 857
M+DWFNKNLK*T
Sbjct: 267 DMIDWFNKNLK*T 229
Score = 166 bits (356), Expect = 3e-040
Identities = 78/139 (56%), Positives = 84/139 (60%)
Frame = -3 / +2
Query: 877 KAGCNCRVYFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKE 698
K G +V+ RFLLNQS M S LYLT+HP TPGKILTK PE +
Sbjct: 209 KGGPLIQVHLRFLLNQSIMSVRASSALFTAAASSPLYLTVHP*ETPGKILTK*AIPELDD 388
Query: 697 RTCSNCXXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAP 518
RTCSN SAP + H TS ISSTVTKEGC+ TA WIS AFANS TTFAP
Sbjct: 389 RTCSNSLTNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSATTFAP 568
Query: 517 QQYPAAPTADTPFSFRAPI 461
QQ PAAPT D P SFRA I
Sbjct: 569 QQ*PAAPTLDAPCSFRAAI 625
Score = 68.9 bits (144), Expect(2) = 1e-023
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = -2 / +1
Query: 848 QILVEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQ 702
++LV+PV HV +G L L+ S + ++SH PSMR+ REDLD+V+NP*V+
Sbjct: 238 EVLVKPVNHVCQGLLGALYSSRIFAIISHGPSMRNPREDLDKVSNP*VR 384
Score = 61.1 bits (127), Expect(2) = 1e-023
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2 / +1
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 421 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 582
>gb|CV059100.1|CV059100 BNEL44d1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL44d1 5' similar to Unknown
protein, mRNA sequence
Length = 607
Score = 160 bits (344), Expect(2) = 1e-060
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = +3 / +3
Query: 342 VVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVSAVGAAGYCWG 521
VVVPDF HGDPY PEN ++P VW+K H P K FEE K VI ALKE+GVS VGAAGYCWG
Sbjct: 297 VVVPDFLHGDPYVPENADRPIQVWLKEHAPGKAFEEAKPVIAALKEQGVSTVGAAGYCWG 476
Query: 522 AKVVVELAKAHEIQAAVLLHPSFVTV 599
AKVV ELAKA+EI AAV+ HPSFV V
Sbjct: 477 AKVVAELAKANEIHAAVMSHPSFVLV 554
Score = 114 bits (244), Expect(2) = 7e-045
Identities = 54/99 (54%), Positives = 62/99 (62%)
Frame = -3 / -1
Query: 637 RIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAPTADTPFSFRAPIT 458
++++ ++ L T TKEGC+ TAAWIS AFA+S TTFAPQQ PAAPT DTP S RA IT
Sbjct: 592 QVQLWGISPL*YLTSTKEGCDITAAWISLAFASSATTFAPQQ*PAAPTVDTPCSLRAAIT 413
Query: 457 CFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTT 341
F SSN F G C F HT G S F GTTT
Sbjct: 412 GFASSNAFPGACSFNHTCIGLSAFSGTYGSPCKKSGTTT 296
Score = 93.6 bits (198), Expect(2) = 1e-060
Identities = 44/88 (50%), Positives = 54/88 (61%)
Frame = +3 / +2
Query: 75 SALSSPPRVHDPRERERGRMASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKA 254
S + S PR +PR GR + P + P G+GK D F G+ V+G SKA
Sbjct: 29 SWIPSKPRPQEPRGLGLGREGYPEWWGEPANVKPGRGEGKGRDKFRGITGSVSGARKSKA 208
Query: 255 AVVLVADVFGFEAPIMRNIADKVASSGY 338
AVVL++DVFGFEAP +R IADKVASSGY
Sbjct: 209 AVVLISDVFGFEAPNLRKIADKVASSGY 292
Score = 86.8 bits (183), Expect(2) = 7e-045
Identities = 43/83 (51%), Positives = 47/83 (56%)
Frame = -3 / -2
Query: 340 KYPDEATLSAMFLIIGASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAG 161
KYPDEATLSA+FL GASNPKTS RTTAAL+ P T + P LS LP P+ G
Sbjct: 294 KYPDEATLSAIFLRFGASNPKTSEMRTTAALDFRAPETDPVIPRNLSRPLPSPRPGLTFA 115
Query: 160 GLSQH*ELAIRPLSLSLGSWTRG 92
G H P LGSW G
Sbjct: 114 GSPHHSG*PSLPSPKPLGSWGLG 46
Score = 63.8 bits (133), Expect(4) = 2e-022
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = +2 / +2
Query: 338 LCCGTRFLSWGSLCT*EC*EALSCVDKVTYSGKRV*RDKTSYWGSKGEGSVCCWSCR 508
L CG RFL+WGS+CT*+ + + V K GK +*R KT Y S+ S+ CW CR
Sbjct: 293 LSCGARFLTWGSICT*KRRQTNTSVVKGACPGKSI*RGKTCYCCSQRTRSIYCWGCR 463
Score = 46.4 bits (95), Expect(4) = 5e-022
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = -1 / -2
Query: 456 VLSLQTLFPEYVTLSTQERASQHSQVHKDPHERNLVPQ 343
VL LQ LFP + L+T + QVH DPH RNL PQ
Sbjct: 411 VLPLQMLFPGHAPLTTLVLVCRRFQVHMDPHVRNLAPQ 298
Score = 42.3 bits (86), Expect(4) = 5e-022
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = -2 / -3
Query: 590 KRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
KRRV +S +DL+SF L N+LCTPAI C
Sbjct: 545 KRRV*HNSCMDLISFR*LSNHLCTPAITC 459
Score = 39.6 bits (80), Expect(4) = 5e-022
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = -2 / -1
Query: 329 RSNFVGYVPHNRRFESEDVGNE 264
RS+F+GY+P RRF+ E+VGNE
Sbjct: 283 RSDFIGYLPQIRRFKPENVGNE 218
Score = 35.0 bits (70), Expect(4) = 2e-022
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / +1
Query: 570 VLLHPSFVTVDDIKEVKCAISILGAEID 653
+L H + DIKEVKC I++LGAE D
Sbjct: 523 LLCHTLLLYW*DIKEVKCPIAVLGAEXD 606
Score = 34.1 bits (68), Expect(4) = 2e-022
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3 / +3
Query: 156 NPPALNPACGKGKVVDSFGGLKAYVAGPEDSK 251
N LNPA GK K SFGG + GPE +
Sbjct: 111 NRRTLNPAGGKAKAGTSFGGSRGPFPGPESPR 206
Score = 30.9 bits (61), Expect(4) = 5e-022
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -3 / -1
Query: 283 PKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGF 170
P+ L SGP PPKL FP AGF
Sbjct: 238 PENVGNEDDGGLGLSGPGNGPRDPPKLVPAFAFPPAGF 125
Score = 27.6 bits (54), Expect(4) = 2e-022
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 505 QGIAGVQRLLWSWQKLMRS 561
Q IAGVQR L S +KLMRS
Sbjct: 460 QVIAGVQRWLLS*RKLMRS 516
>gb|AV935981.1|AV935981 AV935981 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal7f16 3', mRNA sequence
Length = 572
Score = 229 bits (494), Expect = 3e-059
Identities = 92/129 (71%), Positives = 104/129 (80%)
Frame = +3 / -2
Query: 471 LKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEI 650
LKE+G S+VGAAGYCWGAKVV ELAKA+EIQ AV+ HPSFVTVDDIKEVKC I++LGAE
Sbjct: 571 LKEQGASSVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAET 392
Query: 651 DKMSPPELIKQFEQVLSLNSGVGHFVKIFPGVAHGWSVRYNHXXXXXXXXXXXXXXXMLD 830
D MSPPEL+K+FEQVLS NSG+ HFVKIFPGV+HGW+VRYN M+D
Sbjct: 391 DVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGEDAAAVKSAEEALTDMID 212
Query: 831 WFNKNLK*T 857
WFNKNLK*T
Sbjct: 211 WFNKNLK*T 185
Score = 162 bits (349), Expect = 3e-039
Identities = 76/136 (55%), Positives = 82/136 (60%)
Frame = -3 / +3
Query: 877 KAGCNCRVYFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKE 698
K G +V+ RFLLNQS M S LYLT+HP TPGKILTK PE +
Sbjct: 165 KGGPLIQVHLRFLLNQSIMSVRASSALFTAAASSPLYLTVHP*ETPGKILTK*AIPELDD 344
Query: 697 RTCSNCXXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAP 518
RTCSN SAP + H TS ISSTVTKEGC+ TA WIS AFANS TTFAP
Sbjct: 345 RTCSNSLTNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSATTFAP 524
Query: 517 QQYPAAPTADTPFSFR 470
QQ PAAPT D P SFR
Sbjct: 525 QQ*PAAPTLDAPCSFR 572
Score = 68.9 bits (144), Expect(2) = 1e-023
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = -2 / +2
Query: 848 QILVEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQ 702
++LV+PV HV +G L L+ S + ++SH PSMR+ REDLD+V+NP*V+
Sbjct: 194 EVLVKPVNHVCQGLLGALYSSRIFAIISHGPSMRNPREDLDKVSNP*VR 340
Score = 61.1 bits (127), Expect(2) = 1e-023
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = -2 / +2
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTPAIPC 504
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF L + LCTP I C
Sbjct: 377 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTPTITC 538
>gb|BQ471903.1|BQ471903 HV03N05r HV Hordeum vulgare subsp. vulgare cDNA clone HV03N05
5-PRIME, mRNA sequence
Length = 429
Score = 219 bits (473), Expect = 2e-056
Identities = 87/121 (71%), Positives = 100/121 (82%)
Frame = +3 / +1
Query: 132 MASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNI 311
MAS QCC NPP LNPA G+GKVVDSFGG+KAYVAG ++SKAAVVL++DVFGF AP +R I
Sbjct: 67 MASPQCCANPPTLNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAPNLRKI 246
Query: 312 ADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKGVS 491
ADKVA+SGYFVVVPDF HGDPY PE+ ++P VWIK HT K FEE K VI ALKE+G S
Sbjct: 247 ADKVAASGYFVVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGAS 426
Query: 492 A 494
+
Sbjct: 427 S 429
Score = 151 bits (324), Expect = 7e-036
Identities = 72/120 (60%), Positives = 76/120 (63%)
Frame = -3 / -2
Query: 490 DTPFSFRAPITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSA 311
D P SFRA IT F SSN F VC IHT G S GTTTKYPD ATLSA
Sbjct: 425 DAPCSFRAAITGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSA 246
Query: 310 MFLIIGASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAI 131
+FL GA NPKTS RTTAAL+S PAT AL PPKLSTTLP P AG GG +QH LA+
Sbjct: 245 IFLRFGAPNPKTSEMRTTAALDSWAPATYALIPPKLSTTLPSPAAGLSVGGFAQHCGLAM 66
Score = 107 bits (229), Expect = 9e-023
Identities = 52/105 (49%), Positives = 65/105 (61%)
Frame = -2 / -1
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH +++ R I IPM+EIW+HN++ RSNF+GY+P RR + EDVG+
Sbjct: 381 FKCFSRGMLLDPHCYWSVSVFRYIWIPMQEIWHHNEISRRSNFIGYLPQIRRSKPEDVGD 202
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E L+PAEAVDDLAL G V+ V AALRA H
Sbjct: 201 ENYGGLGLLGAGDVRLDPAEAVDDLALAGGGVERRWVRAALRASH 67
>gb|CA020312.1|CA020312 HV14O23r HV Hordeum vulgare subsp. vulgare cDNA clone HV14O23
5-PRIME, mRNA sequence
Length = 443
Score = 215 bits (464), Expect = 3e-055
Identities = 86/134 (64%), Positives = 100/134 (74%)
Frame = +3 / +2
Query: 75 SALSSPPRVHDPRERERGRMASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKA 254
S + P +P GRMA+ QCC +PP LNPA G+GKVVDSFGG+ AYV+G +SKA
Sbjct: 41 SRIPPSPSPQEPAASALGRMATPQCCADPPTLNPAGGEGKVVDSFGGITAYVSGARESKA 220
Query: 255 AVVLVADVFGFEAPIMRNIADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPE 434
AVVL++DVFGFEAP +R IADKVASSGY VVVPDF HGDPY PEN ++P VW+K H P
Sbjct: 221 AVVLISDVFGFEAPNLRKIADKVASSGYLVVVPDFLHGDPYVPENADRPIQVWLKEHAPG 400
Query: 435 KGFEETKQVIGALK 476
K FEE K VI ALK
Sbjct: 401 KAFEEAKPVIAALK 442
Score = 156 bits (336), Expect = 2e-037
Identities = 74/127 (58%), Positives = 81/127 (63%)
Frame = -3 / -3
Query: 472 RAPITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIG 293
RA IT F SSN F G C F HT G S F GTTTKYPDEATLSA+FL G
Sbjct: 438 RAAITGFASSNAFPGACSFNHTCIGLSAFSGTYGSPCKKSGTTTKYPDEATLSAIFLRFG 259
Query: 292 ASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAIRPLSLS 113
ASNPKTS RTTAAL+S P T A+ PPKLSTTLP P AG GG +QH +AI P + +
Sbjct: 258 ASNPKTSEMRTTAALDSRAPETYAVIPPKLSTTLPSPPAGLSVGGSAQHCGVAILPSAEA 79
Query: 112 LGSWTRG 92
GSW G
Sbjct: 78 AGSWGLG 58
Score = 105 bits (223), Expect = 6e-022
Identities = 51/105 (48%), Positives = 62/105 (59%)
Frame = -2 / -2
Query: 446 FKPFFRSM*LYPHRKGLLNILRCIRIPMKEIWYHNKVP*RSNFVGYVPHNRRFESEDVGN 267
FK F R M L PH + + R I IPM EIW+HN + RS+F+GY+P RRF+ EDVG+
Sbjct: 412 FKCFSRGMLL*PHLYWSVGVFRYIWIPM*EIWHHN*ISRRSDFIGYLPQIRRFKPEDVGD 233
Query: 266 EXXXXXXXXXXXXXXLEPAEAVDDLALPAGRVQGWRVIAALRARH 132
E +PAEAV DLAL AG V+ RV AALR H
Sbjct: 232 EDDGGLGLSGAGDVRRDPAEAVHDLALAAGGVERRRVRAALRGSH 98
>gb|BJ475625.1|BJ475625 BJ475625 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal26n14 3', mRNA sequence
Length = 545
Score = 193 bits (417), Expect(2) = 4e-052
Identities = 79/113 (69%), Positives = 89/113 (78%)
Frame = +3 / -1
Query: 519 GAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSPPELIKQFEQVL 698
GAKVV ELAKA+EIQ AV+ HPSFVTVDDIKEVKC I++LGAE D MSPPEL+K+FEQVL
Sbjct: 515 GAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSPPELVKEFEQVL 336
Query: 699 SLNSGVGHFVKIFPGVAHGWSVRYNHXXXXXXXXXXXXXXXMLDWFNKNLK*T 857
S NSG+ HFVKIFPGV+HGW+VRYN M+DWFNKNLK*T
Sbjct: 335 SSNSGIAHFVKIFPGVSHGWTVRYNGEDAAAVKSAEEALTDMIDWFNKNLK*T 177
Score = 138 bits (295), Expect = 7e-032
Identities = 65/127 (51%), Positives = 72/127 (56%)
Frame = -3 / +1
Query: 877 KAGCNCRVYFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKE 698
K G +V+ RFLLNQS M S LYLT+HP TPGKILTK PE +
Sbjct: 157 KGGPLIQVHLRFLLNQSIMSVRASSALFTAAASSPLYLTVHP*ETPGKILTK*AIPELDD 336
Query: 697 RTCSNCXXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAP 518
RTCSN SAP + H TS ISSTVTKEGC+ TA WIS AFANS TTFAP
Sbjct: 337 RTCSNSLTNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSATTFAP 516
Query: 517 QQYPAAP 497
+P
Sbjct: 517 PTITCSP 537
Score = 68.9 bits (144), Expect(2) = 6e-022
Identities = 26/49 (53%), Positives = 38/49 (77%)
Frame = -2 / +3
Query: 848 QILVEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQ 702
++LV+PV HV +G L L+ S + ++SH PSMR+ REDLD+V+NP*V+
Sbjct: 186 EVLVKPVNHVCQGLLGALYSSRIFAIISHGPSMRNPREDLDKVSNP*VR 332
Score = 55.6 bits (115), Expect(2) = 6e-022
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -2 / +3
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSFCQLHNNLCTP 516
WGH ++ SS+ + A LF I++ NKRR++ + LDL+SF L + LCTP
Sbjct: 369 WGHHISFSSKYSDGAFHLFYIIDSNKRRMRHNGCLDLISFR*LCDYLCTP 518
Score = 31.8 bits (63), Expect(2) = 4e-052
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3 / -3
Query: 492 AVGAAGYCWGAK 527
+VGAAGYCWG K
Sbjct: 543 SVGAAGYCWGCK 508
>gb|BG309950.2|BG309950 HVSMEc0015F24f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0015F24f, mRNA sequence
Length = 818
Score = 198 bits (427), Expect = 4e-050
Identities = 78/118 (66%), Positives = 91/118 (77%)
Frame = +3 / +1
Query: 132 MASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNI 311
MAS QCC NPP LNPA G+GKVVDSFGG+KAYVAG ++SKAA V V DVFGF AP +R I
Sbjct: 28 MASPQCCANPPTLNPAAGEGKVVDSFGGIKAYVAGAQESKAAGVGVCDVFGFGAPNLRKI 207
Query: 312 ADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKEKG 485
ADKVA+SGYF+VVPD+ HGDPY PE+ ++P +WI HT K FEE V A KE+G
Sbjct: 208 ADKVAASGYFIVVPDYLHGDPYVPEDADRPVSLWINEHTSGKSFEEATSVFAAFKEQG 381
Score = 130 bits (278), Expect = 2e-029
Identities = 65/122 (53%), Positives = 71/122 (58%)
Frame = -3 / -1
Query: 496 TADTPFSFRAPITCFVSSNPFSGVCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATL 317
T + P S +A T SSN F VC IH G S GTT KYPD ATL
Sbjct: 392 TQNAPCSLKAAKTDVASSNDFPEVCSLIHNDTGLSASSGTYGSPCK*SGTTMKYPDAATL 213
Query: 316 SAMFLIIGASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*EL 137
SA+FL GA NPKTS T T AAL+S PAT AL PPKLSTTLP P AG GG +QH L
Sbjct: 212 SAIFLRFGAPNPKTSQTPTPAALDSWAPATYALIPPKLSTTLPSPAAGLSVGGFAQHCGL 33
Query: 136 AI 131
A+
Sbjct: 32 AM 27
>gb|AJ432736.1|AJ432736 AJ432736 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200022E11F1, mRNA sequence
Length = 301
Score = 196 bits (423), Expect = 2e-049
Identities = 78/97 (80%), Positives = 88/97 (90%)
Frame = +3 / +1
Query: 471 LKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEI 650
LKE+GVS VGAAGYCWGAKVV ELAKA+EI AAV+ HPSFVTV+DIKEVKC I++LGAEI
Sbjct: 7 LKEQGVSTVGAAGYCWGAKVVAELAKANEIHAAVMSHPSFVTVEDIKEVKCPIAVLGAEI 186
Query: 651 DKMSPPELIKQFEQVLSLNSGVGHFVKIFPGVAHGWS 761
DK SPP+L+KQFEQVLS NSG+ HF KIFPGVAHGW+
Sbjct: 187 DKTSPPQLVKQFEQVLSSNSGIAHFAKIFPGVAHGWT 297
Score = 138 bits (296), Expect = 5e-032
Identities = 61/97 (62%), Positives = 67/97 (69%)
Frame = -3 / -3
Query: 760 LHPCATPGKILTKWPTPEFKERTCSNCXXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEG 581
+HP ATPG IL K PE ++RTCSNC SAP + H TSLISSTVTKEG
Sbjct: 296 VHP*ATPGNILAK*AIPELEDRTCSNCLTNCGGDVLSISAPSTAMGHFTSLISSTVTKEG 117
Query: 580 CNSTAAWIS*AFANSTTTFAPQQYPAAPTADTPFSFR 470
C+ TAAWIS AFA+S TTFAPQQ PAAPT DTP S R
Sbjct: 116 CDITAAWISLAFASSATTFAPQQ*PAAPTVDTPCSLR 6
>gb|CA011285.1|CA011285 HT06A10u HT Hordeum vulgare subsp. vulgare cDNA clone HT06A10
3-PRIME, mRNA sequence
Length = 568
Score = 187 bits (402), Expect = 1e-046
Identities = 76/110 (69%), Positives = 86/110 (78%)
Frame = +3 / -2
Query: 528 VVVELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSPPELIKQFEQVLSLN 707
VV ELAKA+EIQ AV+ HPSFVTVDDIKEVKC I++LGAE D MSPPEL+K+FEQVLS N
Sbjct: 567 VVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLGAETDVMSPPELVKEFEQVLSSN 388
Query: 708 SGVGHFVKIFPGVAHGWSVRYNHXXXXXXXXXXXXXXXMLDWFNKNLK*T 857
SG+ HFVKIFPGV+HGW+VRYN M+DWFNKNLK*T
Sbjct: 387 SGIAHFVKIFPGVSHGWTVRYNGEDAAAVKSAEEALTDMIDWFNKNLK*T 238
Score = 128 bits (274), Expect = 6e-029
Identities = 61/117 (52%), Positives = 67/117 (57%)
Frame = -3 / +2
Query: 877 KAGCNCRVYFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKE 698
K G +V+ RFLLNQS M S LYLT+HP TPGKILTK PE +
Sbjct: 218 KGGPLIQVHLRFLLNQSIMSVRASSALFTAAASSPLYLTVHP*ETPGKILTK*AIPELDD 397
Query: 697 RTCSNCXXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTT 527
RTCSN SAP + H TS ISSTVTKEGC+ TA WIS AFANS TT
Sbjct: 398 RTCSNSLTNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSATT 568
>gb|BJ460652.1|BJ460652 BJ460652 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak41l02 3', mRNA sequence
Length = 742
Score = 184 bits (396), Expect = 8e-046
Identities = 77/136 (56%), Positives = 94/136 (69%)
Frame = +3 / -3
Query: 444 EETKQVIGALKEKGVSAVGAAGYCWGAKVVVELAKAHEIQAAVLLHPSFVTVDDIKEVKC 623
E+TK +I ALK++GVS VG GYCWGAKV VEL+K+ EIQ V+ HPS VTVDD+KEVK
Sbjct: 623 EKTKVLIAALKKQGVSEVGVGGYCWGAKVAVELSKSEEIQVVVISHPSQVTVDDMKEVKH 444
Query: 624 AISILGAEIDKMSPPELIKQFEQVLSLNSGVGHFVKIFPGVAHGWSVRYNHXXXXXXXXX 803
I ILGAE+D+ SPP ++ QFEQ L N+ + FVKIFPGVAHG++ RY+
Sbjct: 443 PIEILGAELDQASPPPIVHQFEQALDQNNKIDRFVKIFPGVAHGFACRYDANDAFAVKNA 264
Query: 804 XXXXXXMLDWFNKNLK 851
ML WFNK LK
Sbjct: 263 EEARADMLSWFNKYLK 216
Score = 127 bits (272), Expect = 1e-028
Identities = 65/137 (47%), Positives = 72/137 (52%)
Frame = -3 / +1
Query: 853 YFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKERTCSNCXX 674
+FR+LLNQ SM YL P ATPGKI TK F R CSN
Sbjct: 214 FFRYLLNQLSMSARASSAFLTANASLASYLQAKPWATPGKIFTKRSILLF*SRACSNWCT 393
Query: 673 XXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANSTTTFAPQQYPAAPT 494
SAPRI + LTS +SSTVT EGC T IS F +ST TFAPQQYP PT
Sbjct: 394 IGGGEA*SSSAPRISMGCLTSFMSSTVTCEGCEMTTT*ISSDFDSSTATFAPQQYPPTPT 573
Query: 493 ADTPFSFRAPITCFVSS 443
+DTP FRA I+ V S
Sbjct: 574 SDTPCFFRAAISTLVFS 624
>gb|CA017090.1|CA017090 HV14O23u HV Hordeum vulgare subsp. vulgare cDNA clone HV14O23
3-PRIME, mRNA sequence
Length = 498
Score = 176 bits (378), Expect = 3e-043
Identities = 71/106 (66%), Positives = 83/106 (78%)
Frame = +3 / -1
Query: 537 ELAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSPPELIKQFEQVLSLNSGV 716
ELAKA+EI AAV+ HPSFVTV+DIKEVKC I++LGAEIDK SPPEL+KQFEQVLS NSG+
Sbjct: 495 ELAKANEIHAAVMSHPSFVTVEDIKEVKCPIAVLGAEIDKTSPPELVKQFEQVLSSNSGI 316
Query: 717 GHFVKIFPGVAHGWSVRYNHXXXXXXXXXXXXXXXMLDWFNKNLK* 854
HFVKIFPGV+HGW+VRY M+DWF+KNL+*
Sbjct: 315 AHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 178
Score = 122 bits (260), Expect = 5e-027
Identities = 56/108 (51%), Positives = 66/108 (61%)
Frame = -3 / +2
Query: 859 RVYFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKERTCSNC 680
+++ RFLLNQS + S LYLT+HP TPG ILTK PE ++RTCSNC
Sbjct: 173 QIHCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*AIPELEDRTCSNC 352
Query: 679 XXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFANS 536
SAP + H TSLISSTVTKEGC+ TAAWIS AFA+S
Sbjct: 353 LTNSGGDVLSISAPSTAMGHFTSLISSTVTKEGCDITAAWISLAFASS 496
Score = 116 bits (249), Expect = 2e-025
Identities = 52/100 (52%), Positives = 68/100 (68%)
Frame = -2 / +1
Query: 845 ILVEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQRKXXXXXXXXLR 666
+L +PV+H+ +GFLSTLH +CV VSH+PSMR+ RE LD+V+NP*V+ +
Sbjct: 187 VLAKPVDHM*QGFLSTLHSTCVFTFVSHSPSMRNPREYLDKVSNP*VRGQNLLELLDQFW 366
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSF 546
WG FVN SS+ A LFDI N NKRRV +S +DL+SF
Sbjct: 367 WGCFVNFSSKYSYGAFHLFDIFNSNKRRV*HNSCMDLISF 486
>gb|BQ662063.1|BQ662063 HR01G10u HR Hordeum vulgare subsp. vulgare cDNA clone HR01G10
3-PRIME, mRNA sequence
Length = 535
Score = 173 bits (373), Expect = 1e-042
Identities = 70/105 (66%), Positives = 82/105 (78%)
Frame = +3 / -1
Query: 540 LAKAHEIQAAVLLHPSFVTVDDIKEVKCAISILGAEIDKMSPPELIKQFEQVLSLNSGVG 719
LAKA+EI AAV+ HPSFVTV+DIKEVKC I++LGAEIDK SPPEL+KQFEQVLS NSG+
Sbjct: 535 LAKANEIHAAVMSHPSFVTVEDIKEVKCPIAVLGAEIDKTSPPELVKQFEQVLSSNSGIA 356
Query: 720 HFVKIFPGVAHGWSVRYNHXXXXXXXXXXXXXXXMLDWFNKNLK* 854
HFVKIFPGV+HGW+VRY M+DWF+KNL+*
Sbjct: 355 HFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 221
Score = 119 bits (255), Expect = 2e-026
Identities = 55/106 (51%), Positives = 64/106 (60%)
Frame = -3 / +3
Query: 859 RVYFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKERTCSNC 680
+++ RFLLNQS + S LYLT+HP TPG ILTK PE ++RTCSNC
Sbjct: 216 QIHCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*AIPELEDRTCSNC 395
Query: 679 XXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCNSTAAWIS*AFA 542
SAP + H TSLISSTVTKEGC+ TAAWIS AFA
Sbjct: 396 LTNSGGDVLSISAPSTAMGHFTSLISSTVTKEGCDITAAWISLAFA 533
Score = 116 bits (249), Expect = 2e-025
Identities = 52/100 (52%), Positives = 68/100 (68%)
Frame = -2 / +2
Query: 845 ILVEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQRKXXXXXXXXLR 666
+L +PV+H+ +GFLSTLH +CV VSH+PSMR+ RE LD+V+NP*V+ +
Sbjct: 230 VLAKPVDHM*QGFLSTLHSTCVFTFVSHSPSMRNPREYLDKVSNP*VRGQNLLELLDQFW 409
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRVQQHSSLDLMSF 546
WG FVN SS+ A LFDI N NKRRV +S +DL+SF
Sbjct: 410 WGCFVNFSSKYSYGAFHLFDIFNSNKRRV*HNSCMDLISF 529
>gb|BF629242.2|BF629242 HVSMEb0010H15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010H15f, mRNA sequence
Length = 518
Score = 113 bits (242), Expect(2) = 2e-042
Identities = 46/77 (59%), Positives = 57/77 (74%)
Frame = +3 / +3
Query: 75 SALSSPPRVHDPRERERGRMASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKA 254
S + P +P GRMA+ QCC +PP LNPA G+GKVVDSFGG+ AYV+G +SKA
Sbjct: 36 SRIPPSPSPQEPAASALGRMATPQCCADPPTLNPAGGEGKVVDSFGGITAYVSGARESKA 215
Query: 255 AVVLVADVFGFEAPIMR 305
AVVL++DVFGFEAP +R
Sbjct: 216 AVVLISDVFGFEAPNLR 266
Score = 93.6 bits (198), Expect(2) = 7e-027
Identities = 42/73 (57%), Positives = 50/73 (68%)
Frame = -3 / -2
Query: 310 MFLIIGASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAI 131
++L GASNPKTS RTTAAL+S P T A+ PPKLSTTLP P AG GG +QH +AI
Sbjct: 271 VYLRFGASNPKTSEMRTTAALDSRAPETYAVIPPKLSTTLPSPPAGLSVGGSAQHCGVAI 92
Query: 130 RPLSLSLGSWTRG 92
P + + GSW G
Sbjct: 91 LPSAEAAGSWGLG 53
Score = 81.7 bits (172), Expect(2) = 2e-042
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = +3 / +2
Query: 309 IADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTP 431
IADKVASSGY VVVPDF HGDPY P N ++P VW+K H P
Sbjct: 392 IADKVASSGYLVVVPDFLHGDPYVPXNADRPIQVWLKEHAP 514
Score = 47.3 bits (97), Expect(2) = 7e-027
Identities = 22/42 (52%), Positives = 23/42 (54%)
Frame = -3 / -3
Query: 430 GVCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMF 305
G C F HT G S GTTTKYPDEATLSA+F
Sbjct: 513 GACSFNHTCIGLSAXSGTYGSPCKKSGTTTKYPDEATLSAIF 388
>gb|BF629559.3|BF629559 HVSMEb0013F09f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0013F09f, mRNA sequence
Length = 815
Score = 171 bits (368), Expect = 6e-042
Identities = 72/116 (62%), Positives = 84/116 (72%)
Frame = +3 / +3
Query: 132 MASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNI 311
MAS QCC NPP LNPA G+GKVVDSFGG+KAYVAG ++SK AVVL++DVFGF AP +R I
Sbjct: 45 MASPQCCANPPTLNPAAGEGKVVDSFGGIKAYVAGAQESKGAVVLISDVFGFGAPNLRKI 224
Query: 312 ADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTPEKGFEETKQVIGALKE 479
ADKVA+SGYFV VPD + GDPY PE+ P I+ HT K E +G L E
Sbjct: 225 ADKVAASGYFVGVPDGWRGDPYVPEDAGGPVAGGIRDHTGGKACGEAGAGVGGLNE 392
Score = 107 bits (229), Expect = 9e-023
Identities = 49/73 (67%), Positives = 53/73 (72%)
Frame = -3 / -2
Query: 349 TTTKYPDEATLSAMFLIIGASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGF 170
T TKYPD ATLSA+FL GA NPKTS RTTA L+S PAT AL PPKLSTTLP P AG
Sbjct: 262 TPTKYPDAATLSAIFLRFGAPNPKTSEMRTTAPLDSWAPATYALIPPKLSTTLPSPAAGL 83
Query: 169 RAGGLSQH*ELAI 131
GG +QH LA+
Sbjct: 82 SVGGFAQHCGLAM 44
>gb|BG365950.2|BG365950 HVSMEi0005H10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0005H10f, mRNA sequence
Length = 952
Score = 169 bits (363), Expect = 3e-041
Identities = 66/99 (66%), Positives = 78/99 (78%)
Frame = +3 / +3
Query: 132 MASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNI 311
MAS QCC NPP LNPA G+GKVVDSF G+KAYVAG ++SKAAVVL++DVFG AP +R I
Sbjct: 57 MASPQCCANPPTLNPAAGEGKVVDSFRGIKAYVAGAQESKAAVVLISDVFGCGAPNLRKI 236
Query: 312 ADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHT 428
ADK A+SGYF V PDF HGDPY P++ ++P WIK T
Sbjct: 237 ADKAAASGYFGVAPDFLHGDPYVPDDADRPIAKWIKXPT 353
Score = 101 bits (216), Expect = 6e-021
Identities = 52/99 (52%), Positives = 57/99 (57%)
Frame = -3 / -1
Query: 427 VCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIGASNPKTSATRTTAAL 248
V IH G S G T KYPD A LSA+FL GA +PKTS RTTAAL
Sbjct: 352 VGSLIHFAIGLSASSGTYGSPCKKSGATPKYPDAAALSAIFLRFGAPHPKTSEMRTTAAL 173
Query: 247 ESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAI 131
+S PAT AL P KLSTTLP P AG GG +QH LA+
Sbjct: 172 DSWAPATYALIPRKLSTTLPSPAAGLSVGGFAQHCGLAM 56
>gb|CV062009.1|CV062009 BNEL75d1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL75d1 5' similar to dienelactone
hydrolase family protein, mRNA sequence
Length = 964
Score = 168 bits (361), Expect = 6e-041
Identities = 69/119 (57%), Positives = 81/119 (68%)
Frame = +3 / +2
Query: 75 SALSSPPRVHDPRERERGRMASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKA 254
S + P +P GRMA+ QCC +PP LNPA GK KVVDSFGG+ YV+G SKA
Sbjct: 29 SRIPPSPSPQEPAASALGRMATPQCCADPPTLNPAGGKAKVVDSFGGITGYVSGARKSKA 208
Query: 255 AVVLVADVFGFEAPIMRNIADKVASSGYFVVVPDFFHGDPYAPENVEKPFPVWIKSHTP 431
AVVL++DVFG EAP +R IADK A SGY VVVPD HGDPY PEN ++P V +K P
Sbjct: 209 AVVLISDVFGLEAPNLRKIADKAAPSGY*VVVPDSLHGDPYVPENADRPLQVGVKGAMP 385
Score = 119 bits (254), Expect = 3e-026
Identities = 58/113 (51%), Positives = 66/113 (58%)
Frame = -3 / -2
Query: 430 GVCDFIHTGKGFSTFXXXXXXXXXXXGTTTKYPDEATLSAMFLIIGASNPKTSATRTTAA 251
G+ F T G S F GTTT YPD A LSA+FL GASNPKTS RTTAA
Sbjct: 384 GIAPFTPTCNGLSAFSGTYGSPCKESGTTT*YPDGAALSAIFLRFGASNPKTSEIRTTAA 205
Query: 250 LESSGPAT*ALSPPKLSTTLPFPQAGFRAGGLSQH*ELAIRPLSLSLGSWTRG 92
L+ P T + PPKLSTTL P AGF GG +QH +AI P + + GSW G
Sbjct: 204 LDFRAPETYPVIPPKLSTTLALPPAGFSVGGSAQHCGVAILPSAEAAGSWGLG 46
>gb|CK122919.1|CK122919 BES1824101e05 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010E051 5-PRIME, mRNA sequence
Length = 531
Score = 157 bits (338), Expect = 8e-038
Identities = 62/95 (65%), Positives = 73/95 (76%)
Frame = +3 / +1
Query: 570 VLLHPSFVTVDDIKEVKCAISILGAEIDKMSPPELIKQFEQVLSLNSGVGHFVKIFPGVA 749
V+ HPSFVTV+DIKEVKC I++LGAEIDK SPPEL+KQFEQVLS NSG+ HFVKIFPGV+
Sbjct: 1 VMSHPSFVTVEDIKEVKCPIAVLGAEIDKTSPPELVKQFEQVLSSNSGIAHFVKIFPGVS 180
Query: 750 HGWSVRYNHXXXXXXXXXXXXXXXMLDWFNKNLK* 854
HGW+VRY M+DWF+KNL+*
Sbjct: 181 HGWTVRYKSEDAGAVKSAEEALSHMIDWFSKNLQ* 285
Score = 106 bits (226), Expect = 2e-022
Identities = 47/89 (52%), Positives = 60/89 (67%)
Frame = -2 / -1
Query: 845 ILVEPVEHVRKGFLSTLHGSCVVVVVSHAPSMRHTREDLDEVANP*VQRKXXXXXXXXLR 666
+L +PV+H+ +GFLSTLH +CV VSH+PSMR+ RE LD+V+NP*V+ +
Sbjct: 276 VLAKPVDHM*QGFLSTLHSTCVFTFVSHSPSMRNPREYLDKVSNP*VRGQNLLELLDQFW 97
Query: 665 WGHFVNLSSEDRNCALDLFDIVNGNKRRV 579
WG FVN SS+ A LFDI N NKRRV
Sbjct: 96 WGCFVNFSSKYSYGAFHLFDIFNSNKRRV 10
Score = 101 bits (215), Expect = 8e-021
Identities = 46/95 (48%), Positives = 55/95 (57%)
Frame = -3 / -2
Query: 859 RVYFRFLLNQSSMXXXXXXXXXXXXXXSWLYLTLHPCATPGKILTKWPTPEFKERTCSNC 680
+++ RFLLNQS + S LYLT+HP TPG ILTK PE ++RTCSNC
Sbjct: 290 QIHCRFLLNQSIICDRASSALFTAPASSLLYLTVHP*ETPGNILTK*AIPELEDRTCSNC 111
Query: 679 XXXXXXXXXXXSAPRIEIAHLTSLISSTVTKEGCN 575
SAP + H TSLISSTVTKEGC+
Sbjct: 110 LTNSGGDVLSISAPSTAMGHFTSLISSTVTKEGCD 6
>gb|BG367058.2|BG367058 HVSMEi0009P21f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0009P21f, mRNA sequence
Length = 791
Score = 150 bits (323), Expect = 1e-035
Identities = 61/81 (75%), Positives = 69/81 (85%)
Frame = +3 / +2
Query: 132 MASSQCCDNPPALNPACGKGKVVDSFGGLKAYVAGPEDSKAAVVLVADVFGFEAPIMRNI 311
MAS QCC NPP LNPA G+GKVVDSFGG+KAYVAG ++SKAAVVL++DVFGF AP +R I
Sbjct: 20 MASPQCCANPPTLNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAPNLRKI 199
Query: 312 ADKVASSGYFVVVPDFFHGDP 374
ADKVA+SGY VVPDF GDP
Sbjct: 200 ADKVAASGYCGVVPDFLRGDP 262
Score = 108 bits (230), Expect = 7e-023
Identities = 49/73 (67%), Positives = 54/73 (73%)
Frame = -3 / -3
Query: 349 TTTKYPDEATLSAMFLIIGASNPKTSATRTTAALESSGPAT*ALSPPKLSTTLPFPQAGF 170
TT +YPD ATLSA+FL GA NPKTS RTTAAL+S PAT AL PPKLSTTLP P AG
Sbjct: 237 TTPQYPDAATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYALIPPKLSTTLPSPAAGL 58
Query: 169 RAGGLSQH*ELAI 131
GG +QH LA+
Sbjct: 57 SVGGFAQHCGLAM 19
>gb|AV912065.1|AV912065 AV912065 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak2j18 3', mRNA sequence
Length = 470
Score = 145 bits (311), Expect = 4e-034
Identities = 57/86 (66%), Positives = 65/86 (75%)
Frame = +3 / -3
Query: 600 DDIKEVKCAISILGAEIDKMSPPELIKQFEQVLSLNSGVGHFVKIFPGVAHGWSVRYNHX 779
DDIKEVKC I++LGAE D MSPPEL+K+FEQVLS NSG+ HFVKIFPGV+HGW+VRYN
Sbjct: 468 DDIKEVKCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGE 289
Query: 780 XXXXXXXXXXXXXXMLDWFNKNLK*T 857
M+DWFNKNLK*T
Sbjct: 288 DAAAVKSAEEALTDMIDWFNKNLK*T 211
>gb|AV937218.1|AV937218 AV937218 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal9m22 3', mRNA sequence
Length = 426
Score = 133 bits (285), Expect = 2e-030
Identities = 52/81 (64%), Positives = 60/81 (74%)
Frame = +3 / -2
Query: 615 VKCAISILGAEIDKMSPPELIKQFEQVLSLNSGVGHFVKIFPGVAHGWSVRYNHXXXXXX 794
VKC I++LGAE D MSPPEL+K+FEQVLS NSG+ HFVKIFPGV+HGW+VRYN
Sbjct: 425 VKCPIAVLGAETDVMSPPELVKEFEQVLSSNSGIAHFVKIFPGVSHGWTVRYNGEDAAAV 246
Query: 795 XXXXXXXXXMLDWFNKNLK*T 857
M+DWFNKNLK*T
Sbjct: 245 KSAEEALTDMIDWFNKNLK*T 183
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 464,135,489
Number of Sequences: 312970
Number of extensions: 6833653
Number of successful extensions: 54590
Number of sequences better than 1.0e-020: 85
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 12996929159
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)