TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2750912.2.1
(1095 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU987774.1|BU987774 HF15L16r HF Hordeum vulgare subsp. v... 363 e-104
gb|CA032804.1|CA032804 HX14E02r HX Hordeum vulgare subsp. v... 363 e-103
gb|AV934271.1|AV934271 AV934271 K. Sato unpublished cDNA li... 361 e-103
gb|BJ472357.1|BJ472357 BJ472357 K. Sato unpublished cDNA li... 328 3e-093
gb|AW983082.3|AW983082 HVSMEg0008A15f Hordeum vulgare pre-a... 214 3e-088
gb|CA030942.1|CA030942 HX08J07r HX Hordeum vulgare subsp. v... 323 1e-087
gb|BI955563.1|BI955563 HVSMEm0023J10f Hordeum vulgare green... 167 6e-083
gb|AL506641.1|AL506641 AL506641 Hordeum vulgare Barke devel... 186 2e-067
gb|AV933277.1|AV933277 AV933277 K. Sato unpublished cDNA li... 251 6e-066
gb|CA008952.1|CA008952 HU12K18r HU Hordeum vulgare subsp. v... 248 4e-065
gb|CA023546.1|CA023546 HZ46J12r HZ Hordeum vulgare subsp. v... 217 8e-065
gb|BQ470466.1|BQ470466 HX03B03r HX Hordeum vulgare subsp. v... 195 3e-049
gb|CA009554.1|CA009554 HU14H09r HU Hordeum vulgare subsp. v... 129 7e-047
gb|BQ472196.1|BQ472196 HV04L02r HV Hordeum vulgare subsp. v... 129 7e-047
emb|AJ234409.1|HVU234409 Hordeum vulgare partial mRNA; clon... 105 4e-022
>gb|BU987774.1|BU987774 HF15L16r HF Hordeum vulgare subsp. vulgare cDNA clone HF15L16
5-PRIME, mRNA sequence
Length = 591
Score = 363 bits (789), Expect(2) = e-104
Identities = 147/162 (90%), Positives = 151/162 (93%)
Frame = +1 / +1
Query: 223 MHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGE 402
MHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGE
Sbjct: 88 MHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGE 267
Query: 403 EAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPPVNP 582
EAPEQRFTGTIVG ENLD LWP+S+WR LKVRWDEPSTIPRPD+VSPWKIEPASSPPVNP
Sbjct: 268 EAPEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNP 447
Query: 583 LPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQN 708
LPLSR KRPR N PP SPESSVLTKEGATKID DSAQ +N
Sbjct: 448 LPLSRVKRPRPNVPPVSPESSVLTKEGATKIDMDSAQAQQRN 573
Score = 290 bits (629), Expect(2) = 2e-083
Identities = 133/172 (77%), Positives = 142/172 (82%)
Frame = -2 / -2
Query: 707 F*CGV*AESVSILVAPSFVRTDDSGEGGGAFCLGLFPLERGRGLTGGDEAGSIFQGETLS 528
F C AES+SILVAPSFVRTDDSGE GG F LGL ERG GLTGGDEAGSIFQGETLS
Sbjct: 572 FRCCAWAESISILVAPSFVRTDDSGETGGTFGLGLLTRERGSGLTGGDEAGSIFQGETLS 393
Query: 527 GRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFT 348
GRGIV+GSSQRT + LQ +SGH+ SRFS PTIVPVNLCSGA IE*LFFT
Sbjct: 392 GRGIVDGSSQRTLRDLQFDSGHNWSRFSLPTIVPVNLCSGASSPSNLILNLIPIE*LFFT 213
Query: 347 DSIY*SYGMINSEGLVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGT 192
DSIY*SYG++NSEGLVLGL**TVNM FVLIACHAVARTPRCML L++TEEGT
Sbjct: 212 DSIY*SYGIMNSEGLVLGL**TVNMLFVLIACHAVARTPRCML*LEMTEEGT 57
Score = 238 bits (514), Expect(2) = 2e-062
Identities = 109/170 (64%), Positives = 132/170 (77%)
Frame = +3 / +3
Query: 198 FFGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDE 377
FF + * HAS G C+CMAR H+ HVH LLQ *+EPFRV+++I*SIYGV ++QLF WDE
Sbjct: 63 FFSHF*S*HASWGPCNCMARYQHEKHVHGLLQT*NEPFRVHYTI*SIYGVCEEQLFNWDE 242
Query: 378 IQDEV*RGRGPRAEVYWYNSWL*KS*PTMA*FQLEILEGALG*AFYYPAAR*GLSLEDRA 557
IQDEV*R RG RA+VYWY SW *KS*P +A* +LEI GALG A Y + * LSLE+RA
Sbjct: 243 IQDEV*RRRGTRAKVYWYYSWQ*KS*PIVA*IKLEIS*GALGRAVNYSTSG*SLSLENRA 422
Query: 558 CFITSC*SSPSF*RKKT*TKCASTFP*IICSHKRRCNQD*Y*FCSNTTSK 707
FI SC* + SF +KT*T+C+S+F *I+CS+KRRCN D*Y FC +TT+K
Sbjct: 423 SFIASC*PASSFSGQKT*TECSSSFS*IVCSYKRRCN*D*YGFCPSTTTK 572
Score = 180 bits (389), Expect = 8e-045
Identities = 103/171 (60%), Positives = 112/171 (65%)
Frame = -3 / -3
Query: 709 NFDVVFEQNQYQSWLHLLL*EQMIQGKVEAHFV*VFFL*KEGED*QEVMKQALSSRERPY 530
+F VV QN YQS LHLLL*EQ IQ K+E H V*VF KE *QE MK AL S+ER Y
Sbjct: 574 DFVVVLGQNPYQS*LHLLL*EQTIQEKLEEHSV*VF*PEKEEAG*QEAMKLALFSKERLY 395
Query: 529 LAAG**KAHPSAPSSISNWNQAIVGQDFHSQLLYQ*TSARGPLPLQTXXXXXSQ*NNCFL 350
* A P+AP IS+ QA +GQDFH QL YQ*T A PL LQT SQ N+C
Sbjct: 394 PDVE*LTARPNAP*EISSLIQATIGQDFHCQL*YQ*TFALVPLRLQTSS*ISSQLNSCSS 215
Query: 349 LTPYIDHME**TLKGSS*ACSRQ*TWTLC*SRAMQSQEPRDACFG*I*PKK 197
TPYIDHM **TLKGS * CSR *T C* RAMQ Q P+DAC+ * * KK
Sbjct: 214 QTPYIDHMV**TLKGSF*VCSRP*TCFSC**RAMQLQGPQDACYD*K*LKK 62
Score = 169 bits (364), Expect(2) = 2e-053
Identities = 75/122 (61%), Positives = 89/122 (72%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSPTGIRP*WVKIFTANYCTSKPLLGGLFPFKPHPES 376
LY P RD I +S RL+P HL+ SP RP VKIFTANY TSKPLL LF FKPHPES
Sbjct: 420 LYFPRRDSIRTWNS*RLVPTHLKRSPV*FRPQLVKIFTANYSTSKPLLWCLFAFKPHPES 241
Query: 375 HPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEHGLCVNRVPCSRKNPEMHALARYNRRR 196
HPN I+V + LHILIIW ++L*RAR R VVD EH V+ VPCS K+P+MHA+ R + RR
Sbjct: 240 HPN*IVVLHRLHILIIWYNEL*RARSRFVVDREHAFRVDSVPCSCKDPKMHAMTRND*RR 61
Query: 195 YI 190
++
Sbjct: 60 HV 55
Score = 75.7 bits (159), Expect(3) = 2e-027
Identities = 34/56 (60%), Positives = 41/56 (73%)
Frame = +2 / +2
Query: 197 LLRLYLAKACISGFLRLHGTRLTQSPCSLSTTSLGRALQSLSFHMINIWSQ*KTII 364
LL+ +L ACI G L+LHGT T+ CS STT+L RALQS +HMINIWS *+T I
Sbjct: 62 LLQSFLVIACILGSLQLHGTLSTRKACSRSTTNLERALQSSLYHMINIWSL*RTTI 229
Score = 60.6 bits (126), Expect(2) = 2e-053
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = -1 / -1
Query: 708 ILMWCLSRISINLGCTFFCENR*FRGRWRRILSRSF 601
I + CL RI INL CTFFC+NR FR WR I SRSF
Sbjct: 573 ISLLCLGRIHINLSCTFFCKNRRFRRNWRNIRSRSF 466
Score = 50.1 bits (103), Expect(3) = 2e-027
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = +2 / +2
Query: 404 RPPSRGLLVQ*LAVKILTHYGLIPVGDT*RCAGMSLLLSRGQIRSLPGR 550
R S+GLLV *LAVKILT+ GL GD RC G S L +I SL G+
Sbjct: 269 RHQSKGLLVL*LAVKILTNCGLNQTGDLLRCVGTSRQLFHVRIESLLGK 415
Score = 39.5 bits (80), Expect(2) = 2e-083
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -2 / -1
Query: 191 LDNCLIARLTPTRSSPFSP 135
+D+CLIARLTPTRSSP P
Sbjct: 57 VDSCLIARLTPTRSSPLVP 1
Score = 35.9 bits (72), Expect(2) = e-104
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1 / +2
Query: 136 GENGELRVGVRRAMRQL 186
G GELRVGVRRAMRQL
Sbjct: 2 GTRGELRVGVRRAMRQL 52
Score = 35.0 bits (70), Expect(3) = 2e-027
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +2 / +2
Query: 602 KDLDKMRLHLPLNHLFSQKKVQPR 673
KDLD+M L LN LF QKKVQ R
Sbjct: 467 KDLDRMFLQFLLNRLFLQKKVQLR 538
Score = 22.1 bits (42), Expect(2) = 2e-062
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3 / +1
Query: 153 SSWC*ARYEAVV 188
S WC*A YE V
Sbjct: 19 SCWC*AGYETAV 54
>gb|CA032804.1|CA032804 HX14E02r HX Hordeum vulgare subsp. vulgare cDNA clone HX14E02
5-PRIME, mRNA sequence
Length = 655
Score = 363 bits (789), Expect(2) = e-103
Identities = 147/162 (90%), Positives = 151/162 (93%)
Frame = +1 / +3
Query: 223 MHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGE 402
MHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGE
Sbjct: 87 MHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGE 266
Query: 403 EAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPPVNP 582
EAPEQRFTGTIVG ENLD LWP+S+WR LKVRWDEPSTIPRPD+VSPWKIEPASSPPVNP
Sbjct: 267 EAPEQRFTGTIVGSENLDQLWPESNWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNP 446
Query: 583 LPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQN 708
LPLSR KRPR N PP SPESSVLTKEGATKID DSAQ +N
Sbjct: 447 LPLSRVKRPRPNVPPVSPESSVLTKEGATKIDMDSAQAQQRN 572
Score = 290 bits (629), Expect(3) = 5e-085
Identities = 133/172 (77%), Positives = 142/172 (82%)
Frame = -2 / -1
Query: 707 F*CGV*AESVSILVAPSFVRTDDSGEGGGAFCLGLFPLERGRGLTGGDEAGSIFQGETLS 528
F C AES+SILVAPSFVRTDDSGE GG F LGL ERG GLTGGDEAGSIFQGETLS
Sbjct: 571 FRCCAWAESISILVAPSFVRTDDSGETGGTFGLGLLTRERGSGLTGGDEAGSIFQGETLS 392
Query: 527 GRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFT 348
GRGIV+GSSQRT + LQ +SGH+ SRFS PTIVPVNLCSGA IE*LFFT
Sbjct: 391 GRGIVDGSSQRTLRDLQFDSGHNWSRFSLPTIVPVNLCSGASSPSNLILNLIPIE*LFFT 212
Query: 347 DSIY*SYGMINSEGLVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGT 192
DSIY*SYG++NSEGLVLGL**TVNM FVLIACHAVARTPRCML L++TEEGT
Sbjct: 211 DSIY*SYGIMNSEGLVLGL**TVNMLFVLIACHAVARTPRCML*LEMTEEGT 56
Score = 238 bits (514), Expect(2) = 2e-062
Identities = 109/170 (64%), Positives = 132/170 (77%)
Frame = +3 / +2
Query: 198 FFGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDE 377
FF + * HAS G C+CMAR H+ HVH LLQ *+EPFRV+++I*SIYGV ++QLF WDE
Sbjct: 62 FFSHF*S*HASWGPCNCMARYQHEKHVHGLLQT*NEPFRVHYTI*SIYGVCEEQLFNWDE 241
Query: 378 IQDEV*RGRGPRAEVYWYNSWL*KS*PTMA*FQLEILEGALG*AFYYPAAR*GLSLEDRA 557
IQDEV*R RG RA+VYWY SW *KS*P +A* +LEI GALG A Y + * LSLE+RA
Sbjct: 242 IQDEV*RRRGTRAKVYWYYSWQ*KS*PIVA*IKLEIS*GALGRAVNYSTSG*SLSLENRA 421
Query: 558 CFITSC*SSPSF*RKKT*TKCASTFP*IICSHKRRCNQD*Y*FCSNTTSK 707
FI SC* + SF +KT*T+C+S+F *I+CS+KRRCN D*Y FC +TT+K
Sbjct: 422 SFIASC*PASSFSGQKT*TECSSSFS*IVCSYKRRCN*D*YGFCPSTTTK 571
Score = 180 bits (389), Expect = 8e-045
Identities = 103/171 (60%), Positives = 112/171 (65%)
Frame = -3 / -2
Query: 709 NFDVVFEQNQYQSWLHLLL*EQMIQGKVEAHFV*VFFL*KEGED*QEVMKQALSSRERPY 530
+F VV QN YQS LHLLL*EQ IQ K+E H V*VF KE *QE MK AL S+ER Y
Sbjct: 573 DFVVVLGQNPYQS*LHLLL*EQTIQEKLEEHSV*VF*PEKEEAG*QEAMKLALFSKERLY 394
Query: 529 LAAG**KAHPSAPSSISNWNQAIVGQDFHSQLLYQ*TSARGPLPLQTXXXXXSQ*NNCFL 350
* A P+AP IS+ QA +GQDFH QL YQ*T A PL LQT SQ N+C
Sbjct: 393 PDVE*LTARPNAP*EISSLIQATIGQDFHCQL*YQ*TFALVPLRLQTSS*ISSQLNSCSS 214
Query: 349 LTPYIDHME**TLKGSS*ACSRQ*TWTLC*SRAMQSQEPRDACFG*I*PKK 197
TPYIDHM **TLKGS * CSR *T C* RAMQ Q P+DAC+ * * KK
Sbjct: 213 QTPYIDHMV**TLKGSF*VCSRP*TCFSC**RAMQLQGPQDACYD*K*LKK 61
Score = 169 bits (364), Expect(3) = 8e-055
Identities = 75/122 (61%), Positives = 89/122 (72%)
Frame = -1 / -3
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSPTGIRP*WVKIFTANYCTSKPLLGGLFPFKPHPES 376
LY P RD I +S RL+P HL+ SP RP VKIFTANY TSKPLL LF FKPHPES
Sbjct: 419 LYFPRRDSIRTWNS*RLVPTHLKRSPV*FRPQLVKIFTANYSTSKPLLWCLFAFKPHPES 240
Query: 375 HPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEHGLCVNRVPCSRKNPEMHALARYNRRR 196
HPN I+V + LHILIIW ++L*RAR R VVD EH V+ VPCS K+P+MHA+ R + RR
Sbjct: 239 HPN*IVVLHRLHILIIWYNEL*RARSRFVVDREHAFRVDSVPCSCKDPKMHAMTRND*RR 60
Query: 195 YI 190
++
Sbjct: 59 HV 54
Score = 75.7 bits (159), Expect(3) = 2e-027
Identities = 34/56 (60%), Positives = 41/56 (73%)
Frame = +2 / +1
Query: 197 LLRLYLAKACISGFLRLHGTRLTQSPCSLSTTSLGRALQSLSFHMINIWSQ*KTII 364
LL+ +L ACI G L+LHGT T+ CS STT+L RALQS +HMINIWS *+T I
Sbjct: 61 LLQSFLVIACILGSLQLHGTLSTRKACSRSTTNLERALQSSLYHMINIWSL*RTTI 228
Score = 60.6 bits (126), Expect(3) = 8e-055
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = -1 / -3
Query: 708 ILMWCLSRISINLGCTFFCENR*FRGRWRRILSRSF 601
I + CL RI INL CTFFC+NR FR WR I SRSF
Sbjct: 572 ISLLCLGRIHINLSCTFFCKNRRFRRNWRNIRSRSF 465
Score = 50.1 bits (103), Expect(3) = 2e-027
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = +2 / +1
Query: 404 RPPSRGLLVQ*LAVKILTHYGLIPVGDT*RCAGMSLLLSRGQIRSLPGR 550
R S+GLLV *LAVKILT+ GL GD RC G S L +I SL G+
Sbjct: 268 RHQSKGLLVL*LAVKILTNCGLNQTGDLLRCVGTSRQLFHVRIESLLGK 414
Score = 37.2 bits (75), Expect(3) = 5e-085
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = -2 / -3
Query: 191 LDNCLIARLTPTRSSP 144
+D+CLIARLTPTRSSP
Sbjct: 56 VDSCLIARLTPTRSSP 9
Score = 35.0 bits (70), Expect(3) = 2e-027
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +2 / +1
Query: 602 KDLDKMRLHLPLNHLFSQKKVQPR 673
KDLD+M L LN LF QKKVQ R
Sbjct: 466 KDLDRMFLQFLLNRLFLQKKVQLR 537
Score = 33.6 bits (67), Expect(2) = e-103
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1 / +1
Query: 145 GELRVGVRRAMRQL 186
GELRVGVRRAMRQL
Sbjct: 10 GELRVGVRRAMRQL 51
Score = 26.3 bits (51), Expect(3) = 5e-085
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1 / -3
Query: 768 VGAFSQVVPKAHLLLTLQDRILM 700
+ A V P+ H+LLTLQD ++
Sbjct: 641 IAASQVVGPQGHVLLTLQDHAVL 573
Score = 23.1 bits (44), Expect(3) = 8e-055
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -1
Query: 749 LFLKLICS*LCKT 711
L LK++CS* CKT
Sbjct: 622 LVLKVMCS*PCKT 584
Score = 22.1 bits (42), Expect(2) = 2e-062
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3 / +3
Query: 153 SSWC*ARYEAVV 188
S WC*A YE V
Sbjct: 18 SCWC*AGYETAV 53
>gb|AV934271.1|AV934271 AV934271 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11l09 5', mRNA sequence
Length = 582
Score = 361 bits (784), Expect(2) = e-103
Identities = 148/176 (84%), Positives = 156/176 (88%)
Frame = +1 / +3
Query: 70 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLXXXXXXXXXXXXMHLGVLATA 249
SGWSVFVSSKRLVAGDAFIFLRGE+GELRVGVRRAMRQL MHLGVLATA
Sbjct: 51 SGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHLGVLATA 230
Query: 250 WHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTG 429
WHAINTK+MFTVYYKPRTS SEFIIPYD+Y ESVKN YSIG RF+MRFEGEEAPEQRFTG
Sbjct: 231 WHAINTKTMFTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPEQRFTG 410
Query: 430 TIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPPVNPLPLSR 597
TIVG +NLD LWP+SSWR LKVRWDE STIPRPD+VSPW+IEPASSPPVNPLPLSR
Sbjct: 411 TIVGSDNLDQLWPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASSPPVNPLPLSR 578
Score = 297 bits (643), Expect(2) = 1e-082
Identities = 134/175 (76%), Positives = 147/175 (84%)
Frame = -2 / -3
Query: 593 ERGRGLTGGDEAGSIFQGETLSGRGIVEGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLC 414
ERG GLTGGDEAGSI QGETLSGRGIV+ SSQRT + LQL+SGH+ SR S PT+VPVNLC
Sbjct: 574 ERGSGLTGGDEAGSISQGETLSGRGIVDDSSQRTLRDLQLDSGHNWSRLSLPTMVPVNLC 395
Query: 413 SGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TVNMDFVLIACHAVART 234
SGA IE*+F TDS+Y SYG++NSE LVLGL**TVNM FVLIACHAVART
Sbjct: 394 SGASSPSNLILNLVPIE*MFLTDSVYLSYGIMNSERLVLGL**TVNMVFVLIACHAVART 215
Query: 233 PRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSLLELTKTLQPL 69
PRC+L LD+TEE L++CLIARLTPTRSSP SPLRKMKASPATSLLELTKTLQPL
Sbjct: 214 PRCIL*LDMTEEAMLESCLIARLTPTRSSPLSPLRKMKASPATSLLELTKTLQPL 50
Score = 246 bits (533), Expect(2) = 3e-065
Identities = 109/173 (63%), Positives = 127/173 (73%)
Frame = +3 / +2
Query: 75 LECFCQFQKACCWRRLHFPQRRKR*TSSWC*ARYEAVV*CTFFGYI*PKHASRGSCDCMA 254
LEC CQFQKAC W RLHFPQRR+R* S WC A YE +FF +I* +A C+CMA
Sbjct: 56 LECLCQFQKACRWGRLHFPQRRER*ASCWCEAGYETAFQHSFFSHI*S*YAPWSPCNCMA 235
Query: 255 RD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEIQDEV*RGRGPRAEVYWYN 434
HK HVHCLLQ D+PFRV+++I* +YGV K LFYWDE+QDEV*RGRG RA+VYWY+
Sbjct: 236 CYQHKNHVHCLLQTQDKPFRVHYTI*QVYGVC*KHLFYWDEVQDEV*RGRGTRAKVYWYH 415
Query: 435 SWL*KS*PTMA*FQLEILEGALG*AFYYPAAR*GLSLEDRACFITSC*SSPSF 593
SW * S*P +A +LEI +GALG* Y AR* LSL +RA FITSC* + SF
Sbjct: 416 SWQ**S*PIVARIKLEIPQGALG*VVNYSTAR*SLSLGNRARFITSC*PASSF 574
Score = 221 bits (478), Expect(2) = 4e-059
Identities = 97/160 (60%), Positives = 115/160 (71%)
Frame = -1 / -2
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSPTGIRP*WVKIFTANYCTSKPLLGGLFPFKPHPES 376
LY P RD I P +S RLIP HL+ SP P VKI TANY TSKPLL LFPFKPH E
Sbjct: 536 LYFPRRDSIGPWNS*RLIPTHLEGSPA*FWPQLVKIITANYGTSKPLLWCLFPFKPHLEP 357
Query: 375 HPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEHGLCVNRVPCSRKNPEMHALARYNRRR 196
PNRI VF L IL+IW ++L* A P VVDSEHG CV+ +PCS K+ ++H + RY+ R
Sbjct: 356 RPNRINVFNRLRILVIWYNEL*TACPGFVVDSEHGFCVDSMPCSCKDSKVHTMTRYD*RS 177
Query: 195 YIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPFGTDKNTP 76
Y+ +L HS P+TN+K T SSEENEGV S+KPFGTDK+TP
Sbjct: 176 YVGKLSHSPPHTNTKLTALSSEENEGVPSDKPFGTDKDTP 57
Score = 147 bits (316), Expect = 9e-035
Identities = 82/158 (51%), Positives = 94/158 (59%)
Frame = +2 / +1
Query: 77 GVFLSVPKGLLLETPSFSSEEKTVNFELVLGAL*GSCLMYLLRLYLAKACISGFLRLHGT 256
GV LSVPKGL L TPSFSSEE+ V+F LV G L* S LL+ YL C L+LHG
Sbjct: 58 GVSLSVPKGLSLGTPSFSSEERAVSFVLV*GGL*DSFPT*LLQSYLVIVCTLESLQLHGM 237
Query: 257 RLTQSPCSLSTTSLGRALQSLSFHMINIWSQ*KTIIXXXXXXXXXXXXXRPPSRGLLVQ* 436
TQ PCSLSTT+ G+A+QS +HM +I S KT I R S+GLLV *
Sbjct: 238 LSTQKPCSLSTTNPGQAVQSSLYHMTSIRSLLKTFILLGRGSR*GLKGKRHQSKGLLVP* 417
Query: 437 LAVKILTHYGLIPVGDT*RCAGMSLLLSRGQIRSLPGR 550
LAV ILT+ G GD RC GMS L G I SL G+
Sbjct: 418 LAVIILTNCGQNQAGDPSRCVGMSRQLFHGPIESLLGK 531
Score = 147 bits (315), Expect(3) = 2e-037
Identities = 83/149 (55%), Positives = 92/149 (61%)
Frame = -3 / -1
Query: 592 KEGED*QEVMKQALSSRERPYLAAG**KAHPSAPSSISNWNQAIVGQDFHSQLLYQ*TSA 413
KE *QEVMK+AL +ER Y A * HP+AP IS+ A +GQD+H QL YQ*T A
Sbjct: 573 KEEAG*QEVMKRALFPKERLYRAVE*LTTHPNAP*GISSLILATIGQDYHCQLWYQ*TFA 394
Query: 412 RGPLPLQTXXXXXSQ*NNCFLLTPYIDHME**TLKGSS*ACSRQ*TWTLC*SRAMQSQEP 233
PLPLQT SQ*N CF TPY HM **TL G S CSRQ*TW LC* AMQ Q
Sbjct: 393 LVPLPLQTSS*TSSQ*NKCF*QTPYTCHMV**TLNGLSWVCSRQ*TWFLC**HAMQLQGL 214
Query: 232 RDACFG*I*PKKVH*TTAS*RA*HQLEVH 146
+ A + *I* KK+ S* A HQ E H
Sbjct: 213 QGAYYD*I*LKKLCWKAVS*PASHQHEAH 127
Score = 33.6 bits (67), Expect(2) = e-103
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 28 RHIFRGQPRRHLLQ 69
R IFRGQPRRHLLQ
Sbjct: 8 RGIFRGQPRRHLLQ 49
Score = 30.4 bits (60), Expect(2) = 1e-082
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -2 / -1
Query: 68 *RRCLLGCPRK 36
*RRCLLGCPRK
Sbjct: 48 *RRCLLGCPRK 16
Score = 27.2 bits (53), Expect(2) = 4e-059
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1 / -3
Query: 87 KNTPTTLKEMPPGLPAED 34
K LKEMPP LPAE+
Sbjct: 67 KTLQPLLKEMPPRLPAEN 14
Score = 24.9 bits (48), Expect(3) = 2e-037
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 103 AFWN*QKHSN 74
AFWN*Q+HS+
Sbjct: 84 AFWN*QRHSS 55
Score = 22.6 bits (43), Expect(2) = 3e-065
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 38 SAGNPGGISF 67
SAGN GGISF
Sbjct: 18 SAGNLGGISF 47
Score = 22.1 bits (42), Expect(3) = 2e-037
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / -2
Query: 67 EGDASWVARGR 35
EGDAS VARG+
Sbjct: 47 EGDAS*VARGK 15
>gb|BJ472357.1|BJ472357 BJ472357 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33n21 5', mRNA sequence
Length = 684
Score = 328 bits (711), Expect(2) = 3e-093
Identities = 133/157 (84%), Positives = 140/157 (89%)
Frame = +1 / +1
Query: 223 MHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGE 402
MHLGVLATAWHAINTK+MFTVYYKPRTS SEFIIPYD+Y ESVKN YSIG RF+MRFEGE
Sbjct: 31 MHLGVLATAWHAINTKTMFTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGE 210
Query: 403 EAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPPVNP 582
EAPEQRFTGTIVG +NLD LWP+SSWR LKVRWDE STIPRPD+VSPW+IEPASSPPVNP
Sbjct: 211 EAPEQRFTGTIVGSDNLDQLWPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASSPPVNP 390
Query: 583 LPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQ 693
LPLSR KR R N PP SPESSV TKEGATK D D AQ
Sbjct: 391 LPLSRAKRSRPNVPPASPESSVRTKEGATKADMDCAQ 501
Score = 247 bits (535), Expect(2) = 1e-067
Identities = 113/158 (71%), Positives = 125/158 (79%)
Frame = -2 / -2
Query: 692 *AESVSILVAPSFVRTDDSGEGGGAFCLGLFPLERGRGLTGGDEAGSIFQGETLSGRGIV 513
*A+S+S VAPSFVRTDDSGE GG F L L ERG GLTGGDEAGSI QGETLSGRGIV
Sbjct: 500 *AQSISAFVAPSFVRTDDSGEAGGTFGLDLLARERGSGLTGGDEAGSISQGETLSGRGIV 321
Query: 512 EGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY* 333
+ SSQRT + LQL+SGH+ SR S PT+VPVNLCSGA IE*+F TDS+Y
Sbjct: 320 DDSSQRTLRDLQLDSGHNWSRLSLPTMVPVNLCSGASSPSNLILNLVPIE*MFLTDSVYL 141
Query: 332 SYGMINSEGLVLGL**TVNMDFVLIACHAVARTPRCML 219
SYG++NSE LVLGL**TVNM FVLIACHAVARTPRC+L
Sbjct: 140 SYGIMNSERLVLGL**TVNMVFVLIACHAVARTPRCIL 27
Score = 223 bits (481), Expect(2) = 2e-059
Identities = 99/160 (61%), Positives = 121/160 (75%)
Frame = +3 / +3
Query: 222 HASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEIQDEV*RG 401
+A C+CMA HK HVHCLLQ D+PFRV+++I* +YGV K LFYWDE+QDEV*RG
Sbjct: 30 YAPWSPCNCMACYQHKNHVHCLLQTQDKPFRVHYTI*QVYGVC*KHLFYWDEVQDEV*RG 209
Query: 402 RGPRAEVYWYNSWL*KS*PTMA*FQLEILEGALG*AFYYPAAR*GLSLEDRACFITSC*S 581
RG RA+VYWY+SW * S*P +A +LEI +GALG* Y AR* LSL +RA FITSC*
Sbjct: 210 RGTRAKVYWYHSWQ**S*PIVARIKLEIPQGALG*VVNYSTAR*SLSLGNRARFITSC*P 389
Query: 582 SPSF*RKKT*TKCASTFP*IICSHKRRCNQD*Y*FCSNTT 701
+ SF +K TKC+S+F *I+CS+KRRCN+ *Y CS+TT
Sbjct: 390 ASSFSGQKIQTKCSSSFS*IVCSYKRRCNEG*YGLCSSTT 509
Score = 170 bits (367), Expect(2) = 4e-043
Identities = 90/154 (58%), Positives = 99/154 (64%)
Frame = -3 / -3
Query: 700 VVFEQNQYQSWLHLLL*EQMIQGKVEAHFV*VFFL*KEGED*QEVMKQALSSRERPYLAA 521
VV E N YQ LHLLL EQ IQ K+E H V +F+ KE *QEVMK+AL +ER Y A
Sbjct: 508 VVLEHNPYQPSLHLLLYEQTIQEKLEEHLVWIFWPEKEEAG*QEVMKRALFPKERLYRAV 329
Query: 520 G**KAHPSAPSSISNWNQAIVGQDFHSQLLYQ*TSARGPLPLQTXXXXXSQ*NNCFLLTP 341
* HP+AP IS+ A +GQD+H QL YQ*T A PLPLQT SQ*N CF TP
Sbjct: 328 E*LTTHPNAP*GISSLILATIGQDYHCQLWYQ*TFALVPLPLQTSS*TSSQ*NKCF*QTP 149
Query: 340 YIDHME**TLKGSS*ACSRQ*TWTLC*SRAMQSQ 239
Y HM **TL G S CSRQ*TW LC* AMQ Q
Sbjct: 148 YTCHMV**TLNGLSWVCSRQ*TWFLC**HAMQLQ 47
Score = 146 bits (314), Expect(3) = 8e-047
Identities = 67/111 (60%), Positives = 77/111 (69%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSPTGIRP*WVKIFTANYCTSKPLLGGLFPFKPHPES 376
LY P RD I P +S RLIP HL+ SP P VKI TANY TSKPLL LFPFKPH E
Sbjct: 363 LYFPRRDSIGPWNS*RLIPTHLEGSPA*FWPQLVKIITANYGTSKPLLWCLFPFKPHLEP 184
Query: 375 HPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEHGLCVNRVPCSRKNPEMH 223
PNRI VF L IL+IW ++L* A P VVDSEHG CV+ +PCS K+ ++H
Sbjct: 183 RPNRINVFNRLRILVIWYNEL*TACPGFVVDSEHGFCVDSMPCSCKDSKVH 31
Score = 51.4 bits (106), Expect(3) = 8e-047
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = -1 / -1
Query: 708 ILMWCLSRISINLGCTFFCENR*FRGRWRRILSRSF 601
++ CLS I I+L CTFFC NR FR WR I S SF
Sbjct: 516 LISLCLSTIHISLRCTFFCTNRRFRRSWRNIWSGSF 409
Score = 35.0 bits (70), Expect(2) = 3e-093
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / +1
Query: 745 NNLTESTDSDSTVQKQMMWSPSP 813
N LT+ D D+TVQK M+WS P
Sbjct: 553 NKLTDINDFDATVQKPMVWSTPP 621
Score = 29.5 bits (58), Expect(2) = 1e-067
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -2 / -2
Query: 812 GDGDHIICF*TVESESVLSVRLFL 741
G DH I F*TV S+S++SV L L
Sbjct: 620 GGVDHTIGF*TVASKSLMSVSLLL 549
Score = 28.1 bits (55), Expect(3) = 8e-047
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 801 PHHLLLNSGIRV 766
PHH LLNSGI+V
Sbjct: 609 PHHRLLNSGIKV 574
Score = 27.2 bits (53), Expect(2) = 2e-059
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 749 T*LKAPTLIPLFRSR*CGPHH 811
+*L TL+PLFRS CG H
Sbjct: 557 S*LTLMTLMPLFRSLWCGRRH 619
Score = 24.4 bits (47), Expect(2) = 4e-043
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3 / -3
Query: 811 VMGTTSSASEQWNQS 767
V TT ASEQW+QS
Sbjct: 619 VASTTP*ASEQWHQS 575
>gb|AW983082.3|AW983082 HVSMEg0008A15f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0008A15f, mRNA sequence
Length = 806
Score = 214 bits (462), Expect(3) = 3e-088
Identities = 85/97 (87%), Positives = 89/97 (91%)
Frame = +1 / +1
Query: 223 MHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGE 402
MHLGVLATAWHA+NTKSM TVYYKPRTSPSE IIPYDQYMESVKNNYSIGMRF+MRFEGE
Sbjct: 25 MHLGVLATAWHAMNTKSMLTVYYKPRTSPSELIIPYDQYMESVKNNYSIGMRFKMRFEGE 204
Query: 403 EAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPS 513
EAP QRFTGTIVG ENLD LW +S+WR L VRWDEPS
Sbjct: 205 EAP*QRFTGTIVGSENLDQLWAESNWRSLNVRWDEPS 315
Score = 160 bits (345), Expect(3) = 2e-065
Identities = 75/104 (72%), Positives = 81/104 (77%)
Frame = -2 / -1
Query: 512 EGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY* 333
+GSSQRT + LQ +S H+ SRFS PTIVPVNLC GA IE*LFFTDSIY*
Sbjct: 314 DGSSQRTLRDLQFDSAHNWSRFSLPTIVPVNLCYGASSPSNLILNLIPIE*LFFTDSIY* 135
Query: 332 SYGMINSEGLVLGL**TVNMDFVLIACHAVARTPRCMLWLDITE 201
SYG+INSEGLVLGL**TVNM FV IACHAVARTPRCML L +TE
Sbjct: 134 SYGIINSEGLVLGL**TVNMLFVFIACHAVARTPRCML*LQMTE 3
Score = 140 bits (300), Expect(4) = 1e-048
Identities = 62/98 (63%), Positives = 72/98 (73%)
Frame = -1 / -3
Query: 510 RLIPAHLQVSPTGIRP*WVKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILI 331
RLIP H++ SP P VKIFTANY TSKPLL LF FKPH ESHPN I+V + LHILI
Sbjct: 312 RLIPTHIKRSPV*FSPQLVKIFTANYSTSKPLLWCLFAFKPHLESHPN*IVVLHRLHILI 133
Query: 330 IWNDKL*RARPRLVVDSEHGLCVNRVPCSRKNPEMHAL 217
IW ++L*RAR R VVD H V+ VPCS K+P+MHA+
Sbjct: 132 IWYNQL*RARSRFVVDR*HAFRVHSVPCSCKDPKMHAM 19
Score = 139 bits (298), Expect(2) = 6e-050
Identities = 66/103 (64%), Positives = 79/103 (76%)
Frame = +3 / +3
Query: 201 FGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQLFYWDEI 380
F ++* HAS G C+CMAR H+ HV+ LLQ *+EPFRV ++I*SIYGV ++QLF WDEI
Sbjct: 3 FSHL*S*HASWGPCNCMARYEHEKHVNGLLQT*NEPFRVDYTI*SIYGVCEEQLFNWDEI 182
Query: 381 QDEV*RGRGPRAEVYWYNSWL*KS*PTMA*FQLEILEGALG*A 509
QDEV*R RG A+VYWY SW *KS*P + * +LEI ALG*A
Sbjct: 183 QDEV*RRRGTIAKVYWYYSWQ*KS*PIVG*IKLEIS*CALG*A 311
Score = 118 bits (253), Expect(3) = 3e-088
Identities = 50/65 (76%), Positives = 53/65 (81%)
Frame = +1 / +2
Query: 514 TIPRPDKVSPWKIEPASSPPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQ 693
TIPR D+VSPWKIEPASSP VNPLPLSR KRPR N P SPES+VLTKE ATKID DSAQ
Sbjct: 317 TIPRXDRVSPWKIEPASSPAVNPLPLSRVKRPRPNVPTVSPESTVLTKESATKIDMDSAQ 496
Query: 694 TPHQN 708
+N
Sbjct: 497 AQQRN 511
Score = 108 bits (231), Expect(3) = 6e-034
Identities = 56/97 (57%), Positives = 62/97 (63%)
Frame = -3 / -2
Query: 508 AHPSAPSSISNWNQAIVGQDFHSQLLYQ*TSARGPLPLQTXXXXXSQ*NNCFLLTPYIDH 329
AHP+A IS+ Q +GQDFH QL YQ*T A PL LQT SQ N+C TPYIDH
Sbjct: 310 AHPNAH*EISSLIQPTIGQDFHCQL*YQ*TFAMVPLRLQTSS*ISSQLNSCSSQTPYIDH 131
Query: 328 ME**TLKGSS*ACSRQ*TWTLC*SRAMQSQEPRDACF 218
M * TLKGS * CSR T C RAMQ Q P+DAC+
Sbjct: 130 MV*STLKGSF*VCSRPLTCFSCS*RAMQLQGPQDACY 20
Score = 99 bits (212), Expect(3) = 2e-065
Identities = 48/65 (73%), Positives = 49/65 (75%)
Frame = -2 / -3
Query: 707 F*CGV*AESVSILVAPSFVRTDDSGEGGGAFCLGLFPLERGRGLTGGDEAGSIFQGETLS 528
F C AES+SILVA SFVRT DSGE G F LGL ERG GLT GDEAGSIFQGETLS
Sbjct: 510 FRCCAWAESISILVALSFVRTVDSGETVGTFGLGLLTRERGSGLTAGDEAGSIFQGETLS 331
Query: 527 GRGIV 513
RGIV
Sbjct: 330 XRGIV 316
Score = 78.9 bits (166), Expect(2) = 6e-050
Identities = 36/64 (56%), Positives = 46/64 (71%)
Frame = +3 / +1
Query: 516 YPAAR*GLSLEDRACFITSC*SSPSF*RKKT*TKCASTFP*IICSHKRRCNQD*Y*FCSN 695
Y * LSLE+RA FI C* + SF +KT*T+C+ +F *I CS+KR+CN D*Y FC +
Sbjct: 319 YSTXG*SLSLENRASFIACC*PASSFSGQKT*TECSYSFS*IDCSYKRKCN*D*YGFCPS 498
Query: 696 TTSK 707
TT+K
Sbjct: 499 TTTK 510
Score = 67.0 bits (140), Expect(3) = 5e-023
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +2 / +2
Query: 200 LRLYLAKACISGFLRLHGTRLTQSPCSLSTTSLGRALQSLSFHMINIWSQ*KTII 364
L+ ++ ACI G L+LHGT T+ C STT+L RALQS +HMINIWS *+T I
Sbjct: 2 LQSFVVIACILGSLQLHGTL*TRKAC*RSTTNLERALQS*LYHMINIWSL*RTTI 166
Score = 61.5 bits (128), Expect(4) = 1e-048
Identities = 35/60 (58%), Positives = 39/60 (65%)
Frame = -3 / -1
Query: 709 NFDVVFEQNQYQSWLHLLL*EQMIQGKVEAHFV*VFFL*KEGED*QEVMKQALSSRERPY 530
+F VV QN YQS LH LL*EQ IQ K+ H V*VF KE *Q+ MK AL S+ER Y
Sbjct: 512 DFVVVLGQNPYQS*LHFLL*EQSIQEKL*EHSV*VF*PEKEEAG*QQAMKLALFSKERLY 333
Score = 51.9 bits (107), Expect(3) = 6e-034
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = -1 / -2
Query: 708 ILMWCLSRISINLGCTFFCENR*FRGRWRRILSRSF 601
I + CL RI INL CTFFC+N FR R I SRSF
Sbjct: 511 ISLLCLGRIHINLSCTFFCKNSRFRRNCRNIRSRSF 404
Score = 43.7 bits (89), Expect(3) = 5e-023
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = +2 / +2
Query: 404 RPPSRGLLVQ*LAVKILTHYGLIPVGDT*RCAGMS 508
R S+GLLV *LAVKILT+ GL GD C GMS
Sbjct: 206 RHHSKGLLVL*LAVKILTNCGLNQTGDLLMCVGMS 310
Score = 35.0 bits (70), Expect(3) = 5e-023
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +2 / +3
Query: 602 KDLDKMRLHLPLNHLFSQKKVQPR 673
KDLD+M L LN LF QKKVQ R
Sbjct: 405 KDLDRMFLQFLLNRLFLQKKVQLR 476
Score = 32.7 bits (65), Expect(3) = 3e-088
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1 / +2
Query: 745 NNLTESTDSDSTVQKQMMWSPSPN 816
NNLT DSD+T QK M + SPN
Sbjct: 560 NNLTGKNDSDATGQKPMNGASSPN 631
Score = 28.1 bits (55), Expect(3) = 2e-065
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1 / -2
Query: 798 HHLLLNSGIRVGAFSQVVPKAHLLLTLQDRIL 703
H L +S + A V P+ H+LLTLQD ++
Sbjct: 610 HRFLTSSIRVILASQVVGPQGHVLLTLQDHVV 515
Score = 25.3 bits (49), Expect(4) = 1e-048
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -2 / -3
Query: 815 LGDGDHIICF*TVESESVLSVRLFL 741
LGD I F* V SES L VRL +
Sbjct: 630 LGDEAPFIGF*PVASESFLPVRLLV 556
Score = 23.1 bits (44), Expect(4) = 1e-048
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -3
Query: 749 LFLKLICS*LCKT 711
L LK++CS* CKT
Sbjct: 561 LVLKVMCS*PCKT 523
Score = 22.1 bits (42), Expect(3) = 6e-034
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1 / -2
Query: 816 IG*WGPHHLLLNSGIRVGAFSQVV 745
+G P H L S IRV SQVV
Sbjct: 631 VGG*SPIHRFLTSSIRVILASQVV 560
>gb|CA030942.1|CA030942 HX08J07r HX Hordeum vulgare subsp. vulgare cDNA clone HX08J07
5-PRIME, mRNA sequence
Length = 622
Score = 323 bits (701), Expect = 1e-087
Identities = 133/147 (90%), Positives = 135/147 (91%)
Frame = +1 / +2
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLHGM+WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE+GELRVGVRRAMR
Sbjct: 182 DLHGMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMR 361
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
QL MHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN
Sbjct: 362 QLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 541
Query: 361 YSIGMRFRMRFEGEEAPEQRFTGTIVG 441
YSIGMRFRMRFEGEEAPEQRFTGTIVG
Sbjct: 542 YSIGMRFRMRFEGEEAPEQRFTGTIVG 622
Score = 277 bits (601), Expect = 4e-074
Identities = 122/146 (83%), Positives = 128/146 (87%)
Frame = -2 / -2
Query: 440 PTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLGL**TVNMDFVL 261
PTIVPVNLCSGA IE*LFFTDSIY*SYG++NSEGLVLGL**TVNM FVL
Sbjct: 621 PTIVPVNLCSGASSPSNLILNLIPIE*LFFTDSIY*SYGIMNSEGLVLGL**TVNMLFVL 442
Query: 260 IACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSLLELTKT 81
IACHAVARTPRCML L++TEEGTLD+CLIARLTPTRSSP SPLRKMKASPATSLLELT T
Sbjct: 441 IACHAVARTPRCML*LEMTEEGTLDSCLIARLTPTRSSPLSPLRKMKASPATSLLELTNT 262
Query: 80 LQPL*RRCLLGCPRKMWRNRHSMPCR 3
LQPL*RRCLLGCPRK+WR R SMPCR
Sbjct: 261 LQPL*RRCLLGCPRKIWRKRQSMPCR 184
Score = 239 bits (517), Expect = 2e-062
Identities = 99/147 (67%), Positives = 116/147 (78%)
Frame = -1 / -1
Query: 441 ANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPRLVVDSEHGLCV 262
ANY TSKPLL LF FKPHPESHPN I+V + LHILIIW ++L*RAR R VVD EH V
Sbjct: 622 ANYSTSKPLLWCLFAFKPHPESHPN*IVVLHRLHILIIWYNEL*RARSRFVVDREHAFRV 443
Query: 261 NRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPFGTDKN 82
+ VPCS K+P+MHA+ R + RR++ QL HS PNTN+K SSEENEG+ S KPFGTDK+
Sbjct: 442 DSVPCSCKDPKMHAMTRND*RRHVGQLSHSPPNTNTKLATLSSEENEGIPSYKPFGTDKH 263
Query: 81 TPTTLKEMPPGLPAEDVAESPLHAMQI 1
TPT LKEMPP LP ED+AE+P+HAMQI
Sbjct: 262 TPTALKEMPPRLPTEDMAEAPVHAMQI 182
Score = 236 bits (510), Expect = 2e-061
Identities = 99/146 (67%), Positives = 113/146 (77%)
Frame = +3 / +1
Query: 3 SAWHGVAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC*ARYEA 182
SAWHG+A+PP+LP AT EASPSE LEC CQFQKAC W LHFPQRR+ S WC*A YE
Sbjct: 184 SAWHGLALPPYLPWAT*EASPSERLECVCQFQKACSWGCLHFPQRREWRASCWC*AGYET 363
Query: 183 VV*CTFFGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGVSKKQL 362
V FF + * HAS G C+CMAR H+ HVH LLQ *+EPFRV+++I*SIYGV ++QL
Sbjct: 364 AVQRAFFSHF*S*HASWGPCNCMARYQHEKHVHGLLQT*NEPFRVHYTI*SIYGVCEEQL 543
Query: 363 FYWDEIQDEV*RGRGPRAEVYWYNSW 440
F WDEIQDEV*R RG RA+VYWY SW
Sbjct: 544 FNWDEIQDEV*RRRGTRAKVYWYYSW 621
Score = 170 bits (366), Expect = 1e-041
Identities = 79/121 (65%), Positives = 89/121 (73%)
Frame = +2 / +3
Query: 2 ICMAWSGDSATSSAGNPGGISFRVVGVFLSVPKGLLLETPSFSSEEKTVNFELVLGAL*G 181
ICMAW+G SA SS GN GGISFR VGV LSVPKGL L PSFSSEE+ +F LVLG L*
Sbjct: 183 ICMAWTGASAISSVGNLGGISFRAVGVCLSVPKGL*LGMPSFSSEERVASFVLVLGGL*D 362
Query: 182 SCLMYLLRLYLAKACISGFLRLHGTRLTQSPCSLSTTSLGRALQSLSFHMINIWSQ*KTI 361
SC LL+ +L ACI G L+LHGT T+ CS STT+L RALQS +HMINIWS *+T
Sbjct: 363 SCPTCLLQSFLVIACILGSLQLHGTLSTRKACSRSTTNLERALQSSLYHMINIWSL*RTT 542
Query: 362 I 364
I
Sbjct: 543 I 545
Score = 101 bits (216), Expect(2) = 3e-035
Identities = 59/96 (61%), Positives = 62/96 (64%)
Frame = -3 / -3
Query: 439 QLLYQ*TSARGPLPLQTXXXXXSQ*NNCFLLTPYIDHME**TLKGSS*ACSRQ*TWTLC* 260
QL YQ*T A PL LQT SQ N+C TPYIDHM **TLKGS * CSR *T C*
Sbjct: 620 QL*YQ*TFALVPLRLQTSS*ISSQLNSCSSQTPYIDHMV**TLKGSF*VCSRP*TCFSC* 441
Query: 259 SRAMQSQEPRDACFG*I*PKKVH*TTAS*RA*HQLE 152
RAMQ Q P+DAC+ * * KK T S* A*HQ E
Sbjct: 440 *RAMQLQGPQDACYD*K*LKKARWTAVS*PA*HQHE 333
Score = 67.4 bits (141), Expect(2) = 3e-035
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = -3 / -3
Query: 103 AFWN*QKHSNHSEGDASWVARGRCGGIATPCHAD 2
AFWN*Q HSN SEGDAS VA GR GG A+PCHAD
Sbjct: 284 AFWN*QTHSNRSEGDAS*VAHGRYGGSASPCHAD 183
>gb|BI955563.1|BI955563 HVSMEm0023J10f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0023J10f, mRNA sequence
Length = 690
Score = 167 bits (359), Expect(4) = 6e-083
Identities = 67/80 (83%), Positives = 71/80 (88%)
Frame = +1 / +1
Query: 469 DSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPPVNPLPLSRGKRPRQNAPPPSPESSV 648
+S+WR LKVRWDEPSTIPRPD+VSPWKIEPASSPPVNPLPLSR KRPR N PP SPESSV
Sbjct: 178 ESNWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLPLSRVKRPRPNVPPVSPESSV 357
Query: 649 LTKEGATKIDTDSAQTPHQN 708
LTKEGATKID DSAQ +N
Sbjct: 358 LTKEGATKIDMDSAQAQQRN 417
Score = 139 bits (298), Expect(4) = 1e-061
Identities = 62/80 (77%), Positives = 66/80 (82%)
Frame = -2 / -2
Query: 707 F*CGV*AESVSILVAPSFVRTDDSGEGGGAFCLGLFPLERGRGLTGGDEAGSIFQGETLS 528
F C AES+SILVAPSFVRTDDSGE GG F LGL ERG GLTGGDEAGSIFQGETLS
Sbjct: 416 FRCCAWAESISILVAPSFVRTDDSGETGGTFGLGLLTRERGSGLTGGDEAGSIFQGETLS 237
Query: 527 GRGIVEGSSQRTFKYLQLES 468
GRGIV+GSSQRT + LQ +S
Sbjct: 236 GRGIVDGSSQRTLRDLQFDS 177
Score = 117 bits (250), Expect(4) = 6e-083
Identities = 49/54 (90%), Positives = 49/54 (90%)
Frame = +1 / +3
Query: 295 PRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLD 456
PR S EFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAP QRFTGTIVG ENLD
Sbjct: 3 PRGSGWEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPXQRFTGTIVGSENLD 164
Score = 102 bits (218), Expect(3) = 2e-043
Identities = 49/80 (61%), Positives = 61/80 (76%)
Frame = +3 / +3
Query: 468 *FQLEILEGALG*AFYYPAAR*GLSLEDRACFITSC*SSPSF*RKKT*TKCASTFP*IIC 647
* +LEI GALG*A Y + * LSLE+RA FI SC* + SF +KT*T+C+S+F *I+C
Sbjct: 177 *IKLEIS*GALG*AVNYSTSG*SLSLENRASFIASC*PASSFSGQKT*TECSSSFS*IVC 356
Query: 648 SHKRRCNQD*Y*FCSNTTSK 707
S+KRRCN D*Y FC +TT+K
Sbjct: 357 SYKRRCN*D*YGFCPSTTTK 416
Score = 91.2 bits (193), Expect(4) = 1e-061
Identities = 40/57 (70%), Positives = 44/57 (77%)
Frame = -1 / -2
Query: 465 P*WVKIFTANYCTSKPLLGGLFPFKPHPESHPNRIIVFY*LHILIIWNDKL*RARPR 295
P VKIFTANY TSKPLL LF FKPHPESHPN I+V + LHILIIW ++L A PR
Sbjct: 173 PPLVKIFTANYSTSKPLLWCLFAFKPHPESHPN*IVVLHRLHILIIWYNELPPAPPR 3
Score = 83.0 bits (175), Expect(3) = 2e-043
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = +3 / +2
Query: 315 VYHSI*SIYGVSKKQLFYWDEIQDEV*RGRGPRAEVYWYNSWL*KS*P 458
V+++I*SIYGV ++QLF WDEIQDEV*R RG A+VYWY SW *KS*P
Sbjct: 23 VHYTI*SIYGVCEEQLFNWDEIQDEV*RRRGTXAKVYWYYSWQ*KS*P 166
Score = 80.3 bits (169), Expect(3) = 4e-036
Identities = 46/78 (58%), Positives = 51/78 (65%)
Frame = -3 / -3
Query: 709 NFDVVFEQNQYQSWLHLLL*EQMIQGKVEAHFV*VFFL*KEGED*QEVMKQALSSRERPY 530
+F VV QN YQS LHLLL*EQ IQ K+E H V*VF KE *QE MK AL S+ER Y
Sbjct: 418 DFVVVLGQNPYQS*LHLLL*EQTIQEKLEEHSV*VF*PEKEEAG*QEAMKLALFSKERLY 239
Query: 529 LAAG**KAHPSAPSSISN 476
* AHP+AP IS+
Sbjct: 238 PDVE*LTAHPNAP*EISS 185
Score = 72.9 bits (153), Expect(3) = 4e-036
Identities = 35/54 (64%), Positives = 37/54 (68%)
Frame = -2 / -3
Query: 455 SRFSQPTIVPVNLCSGAXXXXXXXXXXXXIE*LFFTDSIY*SYGMINSEGLVLG 294
SRFS PTIVPVNLC GA IE*LFFTDSIY*SYG++NS L LG
Sbjct: 163 SRFSLPTIVPVNLCXGASSPSNLILNLIPIE*LFFTDSIY*SYGIMNSHPLPLG 2
Score = 61.5 bits (128), Expect(4) = 6e-031
Identities = 31/49 (63%), Positives = 33/49 (67%)
Frame = -3 / -1
Query: 460 VGQDFHSQLLYQ*TSARGPLPLQTXXXXXSQ*NNCFLLTPYIDHME**T 314
+GQDFH QL YQ*T A PL LQT SQ N+C TPYIDHM **T
Sbjct: 168 LGQDFHCQL*YQ*TFAXVPLRLQTSS*ISSQLNSCSSQTPYIDHMV**T 22
Score = 60.6 bits (126), Expect(4) = 6e-031
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = -1 / -1
Query: 708 ILMWCLSRISINLGCTFFCENR*FRGRWRRILSRSF 601
I + CL RI INL CTFFC+NR FR WR I SRSF
Sbjct: 417 ISLLCLGRIHINLSCTFFCKNRRFRRNWRNIRSRSF 310
Score = 51.9 bits (107), Expect(4) = 6e-083
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1 / +1
Query: 745 NNLTESTDSDSTVQKQMMWSPSPN 816
NNLT S DSD+TVQK MMWSPSPN
Sbjct: 466 NNLTGSNDSDATVQKPMMWSPSPN 537
Score = 40.4 bits (82), Expect(4) = 1e-061
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = -2 / -2
Query: 815 LGDGDHIICF*TVESESVLSVRLFL 741
LGDGDHII F TV SES+L VRL +
Sbjct: 536 LGDGDHIIGFWTVASESLLPVRLLV 462
Score = 36.8 bits (74), Expect(3) = 4e-036
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -1 / -1
Query: 816 IG*WGPHHLLLNSGIRVGAFSQVV 745
+G W PHH LL+S IRV A SQVV
Sbjct: 537 VGGWRPHHRLLDSSIRVIAPSQVV 466
Score = 34.5 bits (69), Expect(4) = 6e-031
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -3 / -3
Query: 814 WVMGTTSSASEQWNQSRCFQSGC 746
W M TTS AS Q +QS C QSGC
Sbjct: 535 WGMETTS*ASGQ*HQSHCSQSGC 467
Score = 33.1 bits (66), Expect(4) = 6e-031
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSPTGIRP 463
LY P RD I +S RLIP HL+ SP P
Sbjct: 264 LYFPRRDSIRTWNS*RLIPTHLKRSPV*FTP 172
Score = 29.9 bits (59), Expect(4) = 6e-083
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1 / +2
Query: 805 PSPNGKVHTNFQPRPAMGNWMPLGR 879
P+ +H+ F P+M NWM LGR
Sbjct: 533 PTLEKTMHSAFNRGPSMENWMQLGR 607
Score = 29.0 bits (57), Expect(3) = 2e-043
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +2 / +2
Query: 746 TT*LKAPTLIPLFRSR*CGPHHP 814
TT*L A TL+ L RS *CG H P
Sbjct: 467 TT*LGAMTLMLLSRSL*CGLHPP 535
Score = 23.1 bits (44), Expect(4) = 1e-061
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 749 LFLKLICS*LCKT 711
L LK++CS* CKT
Sbjct: 467 LVLKVMCS*PCKT 429
>gb|AL506641.1|AL506641 AL506641 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03M18T 5',
mRNA sequence
Length = 700
Score = 186 bits (401), Expect(4) = 2e-067
Identities = 74/90 (82%), Positives = 78/90 (86%)
Frame = +1 / +2
Query: 439 GCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPPVNPLPLSRGKRPRQN 618
G ENLD LWP+S+WR KVRWDEPSTIPRPD+VSPWKIEPASSPPVNPLPLSR KRPR N
Sbjct: 2 GSENLDQLWPESNWRSXKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLPLSRVKRPRPN 181
Query: 619 APPPSPESSVLTKEGATKIDTDSAQTPHQN 708
PP SPESSVLTKEGATKID DSAQ +N
Sbjct: 182 VPPVSPESSVLTKEGATKIDMDSAQAQQRN 271
Score = 154 bits (332), Expect(4) = 5e-051
Identities = 69/90 (76%), Positives = 73/90 (81%)
Frame = -2 / -2
Query: 707 F*CGV*AESVSILVAPSFVRTDDSGEGGGAFCLGLFPLERGRGLTGGDEAGSIFQGETLS 528
F C AES+SILVAPSFVRTDDSGE GG F LGL ERG GLTGGDEAGSIFQGETLS
Sbjct: 270 FRCCAWAESISILVAPSFVRTDDSGETGGTFGLGLLTRERGSGLTGGDEAGSIFQGETLS 91
Query: 527 GRGIVEGSSQRTFKYLQLESGHSGSRFSQP 438
GRGIV+GSSQRT LQ +SGH+ SRFS P
Sbjct: 90 GRGIVDGSSQRTLXDLQFDSGHNWSRFSLP 1
Score = 110 bits (236), Expect(3) = 5e-033
Identities = 54/88 (61%), Positives = 67/88 (76%)
Frame = +3 / +1
Query: 444 *KS*PTMA*FQLEILEGALG*AFYYPAAR*GLSLEDRACFITSC*SSPSF*RKKT*TKCA 623
*KS*P +A* +LEI GALG A Y + * LSLE+RA FI SC* + SF +KT*T+C+
Sbjct: 7 *KS*PIVA*IKLEIX*GALGRAVNYSTSG*SLSLENRASFIASC*PASSFSGQKT*TECS 186
Query: 624 STFP*IICSHKRRCNQD*Y*FCSNTTSK 707
S+F *I+CS+KRRCN D*Y FC +TT+K
Sbjct: 187 SSFS*IVCSYKRRCN*D*YGFCPSTTTK 270
Score = 93.5 bits (198), Expect(3) = 9e-028
Identities = 52/89 (58%), Positives = 58/89 (65%)
Frame = -3 / -3
Query: 709 NFDVVFEQNQYQSWLHLLL*EQMIQGKVEAHFV*VFFL*KEGED*QEVMKQALSSRERPY 530
+F VV QN YQS LHLLL*EQ IQ K+E H V*VF KE *QE MK AL S+ER Y
Sbjct: 272 DFVVVLGQNPYQS*LHLLL*EQTIQEKLEEHSV*VF*PEKEEAG*QEAMKLALFSKERLY 93
Query: 529 LAAG**KAHPSAPSSISNWNQAIVGQDFH 443
* A P+AP IS+ QA +GQDFH
Sbjct: 92 PDVE*LTARPNAP*XISSLIQATIGQDFH 6
Score = 60.6 bits (126), Expect(3) = 3e-021
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = -1 / -1
Query: 708 ILMWCLSRISINLGCTFFCENR*FRGRWRRILSRSF 601
I + CL RI INL CTFFC+NR FR WR I SRSF
Sbjct: 271 ISLLCLGRIHINLSCTFFCKNRRFRRNWRNIRSRSF 164
Score = 51.9 bits (107), Expect(4) = 2e-067
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1 / +2
Query: 745 NNLTESTDSDSTVQKQMMWSPSPN 816
NNLT S DSD+TVQK MMWSPSPN
Sbjct: 320 NNLTGSNDSDATVQKPMMWSPSPN 391
Score = 44.6 bits (91), Expect(3) = 3e-021
Identities = 22/39 (56%), Positives = 24/39 (61%)
Frame = -1 / -1
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSPTGIRP*WVKIFTA 439
LY P RD I +S RL+P HL SP RP VKIFTA
Sbjct: 118 LYFPRRDSIRTWNS*RLVPTHLXRSPV*FRPQLVKIFTA 2
Score = 43.7 bits (89), Expect(4) = 2e-067
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +1 / +2
Query: 802 SPSPNGKVHTNFQPRPAMGNWMPLGRRETDFKDA 903
SP+ + FQ RP+M NWM LGR ET FKDA
Sbjct: 383 SPNIGKNHASAFQQRPSMENWMQLGRCETAFKDA 484
Score = 40.4 bits (82), Expect(4) = 5e-051
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = -2 / -2
Query: 815 LGDGDHIICF*TVESESVLSVRLFL 741
LGDGDHII F TV SES+L VRL +
Sbjct: 390 LGDGDHIIGFWTVASESLLPVRLLV 316
Score = 40.0 bits (81), Expect(4) = 5e-051
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = -3 / -3
Query: 901 HP*SQFHAFPMASSYP*QVSAE 836
HP*+QFH FP AS++P*+ SAE
Sbjct: 482 HP*TQFHIFPAASNFP*RASAE 417
Score = 39.1 bits (79), Expect(3) = 5e-033
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = +2 / +3
Query: 836 FSRDLLWVTGCHWEGVKLTSRMP 904
FSR LW GC WE VKL RMP
Sbjct: 417 FSRGPLWKIGCSWEDVKLRLRMP 485
Score = 37.7 bits (76), Expect(3) = 9e-028
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -1 / -1
Query: 816 IG*WGPHHLLLNSGIRVGAFSQVV 745
+G W PHH LL+S IRV A SQVV
Sbjct: 391 VGGWRPHHRLLDSSIRVIAASQVV 320
Score = 34.5 bits (69), Expect(3) = 3e-021
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -3 / -3
Query: 814 WVMGTTSSASEQWNQSRCFQSGC 746
W M TTS AS Q +QS C QSGC
Sbjct: 389 WGMETTS*ASGQ*HQSHCCQSGC 321
Score = 31.8 bits (63), Expect(4) = 2e-067
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1 / +2
Query: 919 DARTXSQSFGDTXXXFMQAYDDS 987
DA + +QSFGD+ FMQ +D++
Sbjct: 479 DASSGAQSFGDSQGFFMQTFDEA 547
Score = 30.4 bits (60), Expect(3) = 9e-028
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -1 / -1
Query: 903 GILEVSFTPSQWHPVTHSRSRLK 835
GIL+ SFT SQ HP+ H LK
Sbjct: 484 GILKRSFTSSQLHPIFHRGPLLK 416
Score = 29.5 bits (58), Expect(3) = 5e-033
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 746 TT*LKAPTLIPLFRSR*CGPHHP 814
TT*L A TL+ L RS *CG H P
Sbjct: 321 TT*LAAMTLMLLSRSL*CGLHPP 389
Score = 23.1 bits (44), Expect(4) = 5e-051
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 749 LFLKLICS*LCKT 711
L LK++CS* CKT
Sbjct: 321 LVLKVMCS*PCKT 283
>gb|AV933277.1|AV933277 AV933277 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6b18 5', mRNA sequence
Length = 667
Score = 251 bits (543), Expect = 6e-066
Identities = 103/117 (88%), Positives = 105/117 (89%)
Frame = +1 / +2
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLHGM+WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE+GELRVGVRRAMR
Sbjct: 317 DLHGMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMR 496
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV 351
QL MHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV
Sbjct: 497 QLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV 667
Score = 244 bits (527), Expect = 7e-064
Identities = 104/116 (89%), Positives = 110/116 (94%)
Frame = -2 / -2
Query: 350 TDSIY*SYGMINSEGLVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIA 171
TDSIY*SYG++NSEGLVLGL**TVNM FVLIACHAVARTPRCML L++TEEGTLD+CLIA
Sbjct: 666 TDSIY*SYGIMNSEGLVLGL**TVNMLFVLIACHAVARTPRCML*LEMTEEGTLDSCLIA 487
Query: 170 RLTPTRSSPFSPLRKMKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
RLTPTRSSP SPLRKMKASPATSLLELT TLQPL*RRCLLGCPRK+WR R SMPCR
Sbjct: 486 RLTPTRSSPLSPLRKMKASPATSLLELTNTLQPL*RRCLLGCPRKIWRKRQSMPCR 319
Score = 185 bits (400), Expect = 2e-046
Identities = 76/115 (66%), Positives = 91/115 (79%)
Frame = -1 / -1
Query: 345 LHILIIWNDKL*RARPRLVVDSEHGLCVNRVPCSRKNPEMHALARYNRRRYIRQLPHSAP 166
LHILIIW ++L*RAR R VVD EH V+ VPCS K+P+MHA+ R + RR++ QL HS P
Sbjct: 661 LHILIIWYNEL*RARSRFVVDREHAFRVDSVPCSCKDPKMHAMTRND*RRHVGQLSHSPP 482
Query: 165 NTNSKFTVFSSEENEGVSSNKPFGTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
NTN+K SSEENEG+ S KPFGTDK+TPT LKEMPP LP ED+AE+P+HAMQI
Sbjct: 481 NTNTKLATLSSEENEGIPSYKPFGTDKHTPTALKEMPPRLPTEDMAEAPVHAMQI 317
Score = 178 bits (384), Expect = 4e-044
Identities = 76/115 (66%), Positives = 87/115 (75%)
Frame = +3 / +1
Query: 3 SAWHGVAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC*ARYEA 182
SAWHG+A+PP+LP AT EASPSE LEC CQFQKAC W LHFPQRR+ S WC*A YE
Sbjct: 319 SAWHGLALPPYLPWAT*EASPSERLECVCQFQKACSWGCLHFPQRREWRASCWC*AGYET 498
Query: 183 VV*CTFFGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGV 347
V FF + * HAS G C+CMAR H+ HVH LLQ *+EPFRV+++I*SIYGV
Sbjct: 499 AVQRAFFSHF*S*HASWGPCNCMARYQHEKHVHGLLQT*NEPFRVHYTI*SIYGV 663
Score = 166 bits (357), Expect = 2e-040
Identities = 76/115 (66%), Positives = 85/115 (73%)
Frame = +2 / +3
Query: 2 ICMAWSGDSATSSAGNPGGISFRVVGVFLSVPKGLLLETPSFSSEEKTVNFELVLGAL*G 181
ICMAW+G SA SS GN GGISFR VGV LSVPKGL L PSFSSEE+ +F LVLG L*
Sbjct: 318 ICMAWTGASAISSVGNLGGISFRAVGVCLSVPKGL*LGMPSFSSEERVASFVLVLGGL*D 497
Query: 182 SCLMYLLRLYLAKACISGFLRLHGTRLTQSPCSLSTTSLGRALQSLSFHMINIWS 346
SC LL+ +L ACI G L+LHGT T+ CS STT+L RALQS +HMINIWS
Sbjct: 498 SCPTCLLQSFLVIACILGSLQLHGTLSTRKACSRSTTNLERALQSSLYHMINIWS 662
Score = 79.3 bits (167), Expect(2) = 1e-028
Identities = 43/65 (66%), Positives = 45/65 (69%)
Frame = -3 / -3
Query: 346 TPYIDHME**TLKGSS*ACSRQ*TWTLC*SRAMQSQEPRDACFG*I*PKKVH*TTAS*RA 167
TPYIDHM **TLKGS * CSR *T C* RAMQ Q P+DAC+ * * KK T S* A
Sbjct: 662 TPYIDHMV**TLKGSF*VCSRP*TCFSC**RAMQLQGPQDACYD*K*LKKARWTAVS*PA 483
Query: 166 *HQLE 152
*HQ E
Sbjct: 482 *HQHE 468
Score = 67.4 bits (141), Expect(2) = 1e-028
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = -3 / -3
Query: 103 AFWN*QKHSNHSEGDASWVARGRCGGIATPCHAD 2
AFWN*Q HSN SEGDAS VA GR GG A+PCHAD
Sbjct: 419 AFWN*QTHSNRSEGDAS*VAHGRYGGSASPCHAD 318
>gb|CA008952.1|CA008952 HU12K18r HU Hordeum vulgare subsp. vulgare cDNA clone HU12K18
5-PRIME, mRNA sequence
Length = 609
Score = 248 bits (537), Expect = 4e-065
Identities = 102/119 (85%), Positives = 105/119 (88%)
Frame = +1 / +2
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE+GELRVGVRRAMR
Sbjct: 251 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMR 430
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKN 357
QL MHLGVLATAWHAINTK+MFTVYYKPRTS SEFIIPYD+Y ESVKN
Sbjct: 431 QLSNIASSVISSHSMHLGVLATAWHAINTKTMFTVYYKPRTSRSEFIIPYDKYTESVKN 607
Score = 242 bits (523), Expect = 3e-063
Identities = 102/119 (85%), Positives = 110/119 (92%)
Frame = -2 / -1
Query: 359 LFFTDSIY*SYGMINSEGLVLGL**TVNMDFVLIACHAVARTPRCMLWLDITEEGTLDNC 180
+F TDS+Y SYG++NSE LVLGL**TVNM FVLIACHAVARTPRC+L LD+TEE L++C
Sbjct: 609 MFLTDSVYLSYGIMNSERLVLGL**TVNMVFVLIACHAVARTPRCIL*LDMTEEAMLESC 430
Query: 179 LIARLTPTRSSPFSPLRKMKASPATSLLELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
LIARLTPTRSSP SPLRKMKASPATSLLELTKTLQPL*RRCLLGCPRKMWR RHSMPCR
Sbjct: 429 LIARLTPTRSSPLSPLRKMKASPATSLLELTKTLQPL*RRCLLGCPRKMWRKRHSMPCR 253
Score = 183 bits (394), Expect = 2e-045
Identities = 75/119 (63%), Positives = 93/119 (78%)
Frame = -1 / -3
Query: 357 VFY*LHILIIWNDKL*RARPRLVVDSEHGLCVNRVPCSRKNPEMHALARYNRRRYIRQLP 178
VF L IL+IW ++L* A P VVDSEHG CV+ +PCS K+ ++H + RY+ R Y+ +L
Sbjct: 607 VFNRLRILVIWYNEL*TACPGFVVDSEHGFCVDSMPCSCKDSKVHTMTRYD*RSYVGKLS 428
Query: 177 HSAPNTNSKFTVFSSEENEGVSSNKPFGTDKNTPTTLKEMPPGLPAEDVAESPLHAMQI 1
HS P+TN+K T SSEENEGV S+KPFGTDK+TP LKEMPP LPAE+VAE+PLHAMQI
Sbjct: 427 HSPPHTNTKLTALSSEENEGVPSDKPFGTDKDTPAALKEMPPRLPAENVAEAPLHAMQI 251
Score = 182 bits (393), Expect = 2e-045
Identities = 75/115 (65%), Positives = 86/115 (74%)
Frame = +3 / +1
Query: 3 SAWHGVAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC*ARYEA 182
SAWHGVA+PPH PRAT EASPSE LEC CQFQKAC W RLHFPQRR+R* S WC A YE
Sbjct: 253 SAWHGVALPPHFPRAT*EASPSERLECLCQFQKACRWGRLHFPQRRER*ASCWCEAGYET 432
Query: 183 VV*CTFFGYI*PKHASRGSCDCMARD*HKVHVHCLLQA*DEPFRVYHSI*SIYGV 347
+FF +I* +A C+CMA HK HVHCLLQ D+PFRV+++I* +YGV
Sbjct: 433 AFQHSFFSHI*S*YAPWSPCNCMACYQHKNHVHCLLQTQDKPFRVHYTI*QVYGV 597
Score = 151 bits (324), Expect = 7e-036
Identities = 74/119 (62%), Positives = 83/119 (69%)
Frame = +2 / +3
Query: 2 ICMAWSGDSATSSAGNPGGISFRVVGVFLSVPKGLLLETPSFSSEEKTVNFELVLGAL*G 181
ICMAWSG SAT SAGN GGISFR GV LSVPKGL L TPSFSSEE+ V+F LV G L*
Sbjct: 252 ICMAWSGASATFSAGNLGGISFRAAGVSLSVPKGLSLGTPSFSSEERAVSFVLV*GGL*D 431
Query: 182 SCLMYLLRLYLAKACISGFLRLHGTRLTQSPCSLSTTSLGRALQSLSFHMINIWSQ*KT 358
S LL+ YL C L+LHG TQ PCSLSTT+ G+A+QS +HM +I S KT
Sbjct: 432 SFPT*LLQSYLVIVCTLESLQLHGMLSTQKPCSLSTTNPGQAVQSSLYHMTSIRSLLKT 608
Score = 74.3 bits (156), Expect(2) = 8e-028
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = -3 / -2
Query: 103 AFWN*QKHSNHSEGDASWVARGRCGGIATPCHAD 2
AFWN*Q+HS+ SEGDAS VARG+CGG ATPCHAD
Sbjct: 353 AFWN*QRHSSRSEGDAS*VARGKCGGSATPCHAD 252
Score = 69.7 bits (146), Expect(2) = 8e-028
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -3 / -2
Query: 358 CFLLTPYIDHME**TLKGSS*ACSRQ*TWTLC*SRAMQSQEPRDACFG*I*PKKVH*TTA 179
CF TPY HM **TL G S CSRQ*TW LC* AMQ Q + A + *I* KK+
Sbjct: 608 CF*QTPYTCHMV**TLNGLSWVCSRQ*TWFLC**HAMQLQGLQGAYYD*I*LKKLCWKAV 429
Query: 178 S*RA*HQLEVH 146
S* A HQ E H
Sbjct: 428 S*PASHQHEAH 396
>gb|CA023546.1|CA023546 HZ46J12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46J12
5-PRIME, mRNA sequence
Length = 550
Score = 217 bits (469), Expect(3) = 8e-065
Identities = 87/105 (82%), Positives = 92/105 (87%)
Frame = +1 / +3
Query: 379 FRMRFEGEEAPEQRFTGTIVGCENLDPLWPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEP 558
F+MRFEGEEAPEQRFTGTIVG +NLD LWP+SSWR LKVRWDE STIPRPD+VSPW+IEP
Sbjct: 12 FKMRFEGEEAPEQRFTGTIVGSDNLDQLWPESSWRSLKVRWDESSTIPRPDRVSPWEIEP 191
Query: 559 ASSPPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQ 693
ASSPPVNPLPLSR KR R N PP SPESSV TKEGATK D D AQ
Sbjct: 192 ASSPPVNPLPLSRAKRSRPNVPPASPESSVRTKEGATKADMDCAQ 326
Score = 163 bits (352), Expect(3) = 3e-046
Identities = 72/96 (75%), Positives = 79/96 (82%)
Frame = -2 / -1
Query: 692 *AESVSILVAPSFVRTDDSGEGGGAFCLGLFPLERGRGLTGGDEAGSIFQGETLSGRGIV 513
*A+S+S VAPSFVRTDDSGE GG F L L ERG GLTGGDEAGSI QGETLSGRGIV
Sbjct: 325 *AQSISAFVAPSFVRTDDSGEAGGTFGLDLLARERGSGLTGGDEAGSISQGETLSGRGIV 146
Query: 512 EGSSQRTFKYLQLESGHSGSRFSQPTIVPVNLCSGA 405
+ SSQRT + LQL+SGH+ SR S PT+VPVNLCSGA
Sbjct: 145 DDSSQRTLRDLQLDSGHNWSRLSLPTMVPVNLCSGA 38
Score = 147 bits (316), Expect(3) = 2e-039
Identities = 68/108 (62%), Positives = 83/108 (76%)
Frame = +3 / +2
Query: 378 IQDEV*RGRGPRAEVYWYNSWL*KS*PTMA*FQLEILEGALG*AFYYPAAR*GLSLEDRA 557
+QDEV*RGRG RA+VYWY+SW * S*P +A +LEI +GALG* Y AR* LSL +RA
Sbjct: 11 VQDEV*RGRGTRAKVYWYHSWQ**S*PIVARIKLEIPQGALG*VVNYSTAR*SLSLGNRA 190
Query: 558 CFITSC*SSPSF*RKKT*TKCASTFP*IICSHKRRCNQD*Y*FCSNTT 701
FITSC* + SF +K TKC+S+F *I+CS+KRRCN+ *Y CS+TT
Sbjct: 191 RFITSC*PASSFSGQKIQTKCSSSFS*IVCSYKRRCNEG*YGLCSSTT 334
Score = 114 bits (244), Expect(3) = 4e-031
Identities = 59/104 (56%), Positives = 68/104 (65%)
Frame = -3 / -2
Query: 700 VVFEQNQYQSWLHLLL*EQMIQGKVEAHFV*VFFL*KEGED*QEVMKQALSSRERPYLAA 521
VV E N YQ LHLLL EQ IQ K+E H V +F+ KE *QEVMK+AL +ER Y A
Sbjct: 333 VVLEHNPYQPSLHLLLYEQTIQEKLEEHLVWIFWPEKEEAG*QEVMKRALFPKERLYRAV 154
Query: 520 G**KAHPSAPSSISNWNQAIVGQDFHSQLLYQ*TSARGPLPLQT 389
* HP+AP IS+ A +GQD+H QL YQ*T A PLPLQT
Sbjct: 153 E*LTTHPNAP*GISSLILATIGQDYHCQLWYQ*TFALVPLPLQT 22
Score = 80.3 bits (169), Expect(4) = 2e-028
Identities = 38/59 (64%), Positives = 40/59 (67%)
Frame = -1 / -3
Query: 555 LYLPGRDLIWPRDSRRLIPAHLQVSPTGIRP*WVKIFTANYCTSKPLLGGLFPFKPHPE 379
LY P RD I P +S RLIP HL+ SP P VKI TANY TSKPLL LFPFKPH E
Sbjct: 188 LYFPRRDSIGPWNS*RLIPTHLEGSPA*FWPQLVKIITANYGTSKPLLWCLFPFKPHLE 12
Score = 51.4 bits (106), Expect(4) = 2e-028
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = -1 / -3
Query: 708 ILMWCLSRISINLGCTFFCENR*FRGRWRRILSRSF 601
++ CLS I I+L CTFFC NR FR WR I S SF
Sbjct: 341 LISLCLSTIHISLRCTFFCTNRRFRRSWRNIWSGSF 234
Score = 35.0 bits (70), Expect(3) = 8e-065
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / +3
Query: 745 NNLTESTDSDSTVQKQMMWSPSP 813
N LT+ D D+TVQK M+WS P
Sbjct: 378 NKLTDINDFDATVQKPMVWSTPP 446
Score = 34.5 bits (69), Expect(3) = 8e-065
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1 / +3
Query: 835 FQPRPAMGNWMPLGRRETDFKDA 903
FQ RP++ N + L RRE DFKDA
Sbjct: 477 FQQRPSVHNSIQLRRREADFKDA 545
Score = 30.8 bits (61), Expect(3) = 3e-046
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3 / -2
Query: 901 HP*SQFHAFPMASSYP*QVSAE 836
HP*SQ HAF S+Y + SAE
Sbjct: 543 HP*SQLHAFATESNYAQRASAE 478
Score = 30.4 bits (60), Expect(3) = 4e-031
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1 / -3
Query: 903 GILEVSFTPSQWHPVTHSRSRLK 835
GIL+VSFTPSQ + + H LK
Sbjct: 545 GILKVSFTPSQLNRIMHRGPLLK 477
Score = 29.5 bits (58), Expect(3) = 3e-046
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -2 / -1
Query: 812 GDGDHIICF*TVESESVLSVRLFL 741
G DH I F*TV S+S++SV L L
Sbjct: 445 GGVDHTIGF*TVASKSLMSVSLLL 374
Score = 28.1 bits (55), Expect(3) = 4e-031
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / -3
Query: 801 PHHLLLNSGIRV 766
PHH LLNSGI+V
Sbjct: 434 PHHRLLNSGIKV 399
Score = 27.2 bits (53), Expect(3) = 2e-039
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 749 T*LKAPTLIPLFRSR*CGPHH 811
+*L TL+PLFRS CG H
Sbjct: 382 S*LTLMTLMPLFRSLWCGRRH 444
Score = 26.7 bits (52), Expect(3) = 2e-039
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 836 FSRDLLWVTGCHWEGVKLTSRMP 904
FSR L + EGVKLT RMP
Sbjct: 478 FSRGPLCIIRFSCEGVKLTLRMP 546
Score = 25.3 bits (49), Expect(4) = 2e-028
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -2 / -1
Query: 902 ASLKSVSRLPNGIQLPIAGL 843
ASLKS SRL N I+L GL
Sbjct: 544 ASLKSASRLRN*IELCTEGL 485
Score = 24.4 bits (47), Expect(4) = 2e-028
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3 / -2
Query: 811 VMGTTSSASEQWNQS 767
V TT ASEQW+QS
Sbjct: 444 VASTTP*ASEQWHQS 400
>gb|BQ470466.1|BQ470466 HX03B03r HX Hordeum vulgare subsp. vulgare cDNA clone HX03B03
5-PRIME, mRNA sequence
Length = 632
Score = 195 bits (421), Expect = 3e-049
Identities = 81/91 (89%), Positives = 85/91 (93%)
Frame = -2 / -1
Query: 275 MDFVLIACHAVARTPRCMLWLDITEEGTLDNCLIARLTPTRSSPFSPLRKMKASPATSLL 96
M FVLIACHAVARTPRCML L++TEEGTLD+CLIARLTPTRSSP SPLRKMKASPATSLL
Sbjct: 632 MLFVLIACHAVARTPRCML*LEMTEEGTLDSCLIARLTPTRSSPLSPLRKMKASPATSLL 453
Query: 95 ELTKTLQPL*RRCLLGCPRKMWRNRHSMPCR 3
ELT TLQPL*RRCLLGCPRK+WR R SMPCR
Sbjct: 452 ELTNTLQPL*RRCLLGCPRKIWRKRQSMPCR 360
Score = 187 bits (403), Expect = 1e-046
Identities = 77/91 (84%), Positives = 79/91 (86%)
Frame = +1 / +1
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
DLHGM+WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE+GELRVGVRRAMR
Sbjct: 358 DLHGMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMR 537
Query: 181 QLXXXXXXXXXXXXMHLGVLATAWHAINTKS 273
QL MHLGVLATAWHAINTKS
Sbjct: 538 QLSNVPSSVISSHSMHLGVLATAWHAINTKS 630
Score = 147 bits (315), Expect = 1e-034
Identities = 58/88 (65%), Positives = 71/88 (80%)
Frame = -1 / -3
Query: 264 VNRVPCSRKNPEMHALARYNRRRYIRQLPHSAPNTNSKFTVFSSEENEGVSSNKPFGTDK 85
V+ VPCS K+P+MHA+ R + RR++ QL HS PNTN+K SSEENEG+ S KPFGTDK
Sbjct: 621 VDSVPCSCKDPKMHAMTRND*RRHVGQLSHSPPNTNTKLATLSSEENEGIPSYKPFGTDK 442
Query: 84 NTPTTLKEMPPGLPAEDVAESPLHAMQI 1
+TPT LKEMPP LP ED+AE+P+HAMQI
Sbjct: 441 HTPTALKEMPPRLPTEDMAEAPVHAMQI 358
Score = 139 bits (298), Expect = 3e-032
Identities = 58/91 (63%), Positives = 65/91 (71%)
Frame = +3 / +3
Query: 3 SAWHGVAIPPHLPRATQEASPSEWLECFCQFQKACCWRRLHFPQRRKR*TSSWC*ARYEA 182
SAWHG+A+PP+LP AT EASPSE LEC CQFQKAC W LHFPQRR+ S WC*A YE
Sbjct: 360 SAWHGLALPPYLPWAT*EASPSERLECVCQFQKACSWGCLHFPQRREWRASCWC*AGYET 539
Query: 183 VV*CTFFGYI*PKHASRGSCDCMARD*HKVH 275
V FF + * HAS G C+CMAR H+ H
Sbjct: 540 AVQRAFFSHF*S*HASWGPCNCMARYQHEKH 632
Score = 125 bits (267), Expect = 5e-028
Identities = 58/89 (65%), Positives = 65/89 (73%)
Frame = +2 / +2
Query: 2 ICMAWSGDSATSSAGNPGGISFRVVGVFLSVPKGLLLETPSFSSEEKTVNFELVLGAL*G 181
ICMAW+G SA SS GN GGISFR VGV LSVPKGL L PSFSSEE+ +F LVLG L*
Sbjct: 359 ICMAWTGASAISSVGNLGGISFRAVGVCLSVPKGL*LGMPSFSSEERVASFVLVLGGL*D 538
Query: 182 SCLMYLLRLYLAKACISGFLRLHGTRLTQ 268
SC LL+ +L ACI G L+LHGT T+
Sbjct: 539 SCPTCLLQSFLVIACILGSLQLHGTLSTR 625
>gb|CA009554.1|CA009554 HU14H09r HU Hordeum vulgare subsp. vulgare cDNA clone HU14H09
5-PRIME, mRNA sequence
Length = 628
Score = 129 bits (276), Expect(3) = 7e-047
Identities = 50/107 (46%), Positives = 70/107 (65%)
Frame = +1 / +1
Query: 40 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLXXXXXXXXXXX 219
R + +RHLL +GWS+F+S KRL+AGD+ +F+R +L +G+RRA RQ
Sbjct: 1 RHEAKRHLLTTGWSLFISGKRLIAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSD 180
Query: 220 XMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
MH+GVLA A HA S FT++Y PR SPSEF+IP+ +Y ++V N
Sbjct: 181 SMHIGVLAAAAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAVYGN 321
Score = 51.4 bits (106), Expect(3) = 7e-047
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +1 / +1
Query: 355 NNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPL 462
N S+GMRFRM FE EE+ +R+ GTI G +LDP+
Sbjct: 319 NQLSLGMRFRMMFETEESGTRRYMGTITGISDLDPV 426
Score = 45.9 bits (94), Expect(3) = 7e-047
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1 / +1
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSP 570
W +S WR ++V WDE + R +VS W IEP +P
Sbjct: 430 WKNSQWRNIQVAWDEAAPSERRTRVSLWDIEPVIAP 537
>gb|BQ472196.1|BQ472196 HV04L02r HV Hordeum vulgare subsp. vulgare cDNA clone HV04L02
5-PRIME, mRNA sequence
Length = 566
Score = 129 bits (276), Expect(3) = 7e-047
Identities = 50/107 (46%), Positives = 70/107 (65%)
Frame = +1 / +1
Query: 40 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLXXXXXXXXXXX 219
R + +RHLL +GWS+F+S KRL+AGD+ +F+R +L +G+RRA RQ
Sbjct: 1 RHEAKRHLLTTGWSLFISGKRLIAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSD 180
Query: 220 XMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN 360
MH+GVLA A HA S FT++Y PR SPSEF+IP+ +Y ++V N
Sbjct: 181 SMHIGVLAAAAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAVYGN 321
Score = 51.4 bits (106), Expect(3) = 7e-047
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +1 / +1
Query: 355 NNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENLDPL 462
N S+GMRFRM FE EE+ +R+ GTI G +LDP+
Sbjct: 319 NQLSLGMRFRMMFETEESGTRRYMGTITGISDLDPV 426
Score = 45.9 bits (94), Expect(3) = 7e-047
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1 / +1
Query: 463 WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSP 570
W +S WR ++V WDE + R +VS W IEP +P
Sbjct: 430 WKNSQWRNIQVAWDEAAPSERRTRVSLWDIEPVIAP 537
>emb|AJ234409.1|HVU234409 Hordeum vulgare partial mRNA; clone cMWG0660
Length = 485
Score = 105 bits (225), Expect = 4e-022
Identities = 39/60 (65%), Positives = 51/60 (85%)
Frame = +1 / +2
Query: 1 DLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 180
D+H +EW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ E +L +G+RRA R
Sbjct: 290 DIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLWLGIRRANR 469
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.317 0.131 0.410
Matrix: BLOSUM62
Number of Hits to DB: 499,171,999
Number of Sequences: 312970
Number of extensions: 8461733
Number of successful extensions: 115155
Number of sequences better than 1.0e-020: 21
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 13276429917
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)