TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2649891.2.1
         (621 letters)

Database: Hordeum_nucl_with_EST.fasta 
           312,970 sequences; 175,134,539 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BU980984.1|BU980984  HA22E18r HA Hordeum vulgare subsp. v...   131   3e-055
gb|BM098205.2|BM098205  EBpi03_SQ002_N14_R pistil, 4 DPA, no...   131   3e-055
gb|BG369116.2|BG369116  HVSMEi0021M10f Hordeum vulgare 20 DA...   118   9e-046
gb|BI950777.1|BI950777  HVSMEl0023C15f Hordeum vulgare spike...    98   1e-038
gb|BQ759881.1|BQ759881  EBpi05_SQ004_P16_R pistil, 8 DPA, no...    91   3e-038
gb|AV917139.1|AV917139  AV917139 K. Sato unpublished cDNA li...    91   3e-037
gb|CV055940.1|CV055940  BNEL12B5 Barley EST endosperm librar...    91   2e-035
gb|BF260026.3|BF260026  HVSMEf0020O13f Hordeum vulgare seedl...    87   2e-034
gb|CK122346.1|CK122346  BES1824102p12 BES1824 Hordeum vulgar...    84   4e-034
gb|CV058074.1|CV058074  BNEL34a7 Barley EST endosperm librar...    91   4e-034
gb|BE060246.3|BE060246  HVSMEg0011L08f Hordeum vulgare pre-a...    84   4e-034
gb|BG368109.2|BG368109  HVSMEi0015L12f Hordeum vulgare 20 DA...   131   6e-034
gb|BF622288.3|BF622288  HVSMEa0002I16f Hordeum vulgare seedl...    90   1e-032
gb|BG368126.2|BG368126  HVSMEi0015M21f Hordeum vulgare 20 DA...   131   1e-032
gb|BG368652.1|BG368652  HVSMEi0020B24f Hordeum vulgare 20 DA...   129   6e-032
gb|AV928430.1|AV928430  AV928430 K. Sato unpublished cDNA li...    87   4e-031
gb|CA017263.1|CA017263  HV14A15u HV Hordeum vulgare subsp. v...    84   1e-030
gb|BF254126.2|BF254126  HVSMEf0003B13f Hordeum vulgare seedl...    91   3e-030
gb|BF257093.3|BF257093  HVSMEf0011N11f Hordeum vulgare seedl...   106   3e-030
gb|CK123980.1|CK123980  BES1824106f16 BES1824 Hordeum vulgar...    91   4e-030
gb|BJ463021.1|BJ463021  BJ463021 K. Sato unpublished cDNA li...    96   4e-030
gb|BQ459308.1|BQ459308  HA01I15r HA Hordeum vulgare subsp. v...    80   2e-029
gb|CK124171.1|CK124171  BES1824107e17 BES1824 Hordeum vulgar...    81   4e-028
gb|BQ470849.1|BQ470849  HX04D14r HX Hordeum vulgare subsp. v...    79   4e-028
gb|BM101447.2|BM101447  EBpi01_SQ003_O01_R pistil, 1 DPA, no...    84   6e-028
gb|BQ459628.1|BQ459628  HA08J01r HA Hordeum vulgare subsp. v...    81   4e-027
gb|BE454367.2|BE454367  HVSMEh0093N18f Hordeum vulgare 5-45 ...    84   1e-026
gb|BM097618.2|BM097618  EBem04_SQ002_D15_R embryo, 12 DPA, n...    95   6e-026
gb|CK122737.1|CK122737  BES1824105j22 BES1824 Hordeum vulgar...    91   1e-024
gb|BI959138.1|BI959138  HVSMEn0018F10f Hordeum vulgare rachi...    93   1e-024
gb|CB880652.1|CB880652  HM07E17w HM Hordeum vulgare subsp. v...    87   2e-024
gb|CB881234.1|CB881234  HM09C23w HM Hordeum vulgare subsp. v...    87   2e-024
gb|BQ465138.1|BQ465138  HU02M06r HU Hordeum vulgare subsp. v...    91   3e-024
gb|BF253787.2|BF253787  HVSMEf0002C01f Hordeum vulgare seedl...    91   2e-023
gb|BE193589.2|BE193589  HVSMEh0081M20f Hordeum vulgare 5-45 ...   103   5e-023
gb|CA019924.1|CA019924  HV13L18r HV Hordeum vulgare subsp. v...   106   1e-022
gb|BQ467895.1|BQ467895  HR01E04r HR Hordeum vulgare subsp. v...    87   2e-022
gb|BU986289.1|BU986289  HF11E17r HF Hordeum vulgare subsp. v...    87   4e-021
>gb|BU980984.1|BU980984 HA22E18r HA Hordeum vulgare subsp. vulgare cDNA clone HA22E18
           5-PRIME, mRNA sequence
          Length = 567

 Score =  131 bits (281), Expect(2) = 3e-055
 Identities = 52/67 (77%), Positives = 59/67 (88%)
 Frame = -2 / +3

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           G MAKPGQADQLR+AGRL+IQY RVPC+W GM +AFKVDAGSN  YLAVL+EYE GDG+L
Sbjct: 99  GGMAKPGQADQLRAAGRLQIQYTRVPCNWRGMHVAFKVDAGSNPYYLAVLIEYEDGDGDL 278

                  
Query: 440 RSVELMQ 420
            SVELM+
Sbjct: 279 SSVELME 299

 Score =  103 bits (220), Expect(2) = 3e-055
 Identities = 40/55 (72%), Positives = 45/55 (81%)
 Frame = -2 / +3

                                                                  
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
           M +SWG VWR NSG  L  PFSVRLTS SG+T+VAS+VIPAGW PG TYRSVVN+
Sbjct: 330 MDRSWGAVWRYNSGPMLHAPFSVRLTSSSGKTLVASNVIPAGWKPGGTYRSVVNY 494

 Score = 99.6 bits (211), Expect(2) = 2e-041
 Identities = 45/67 (67%), Positives = 51/67 (76%)
 Frame = +3 / -2

                                                                       
Query: 420 LHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGAAELVGL 599
           LHELH  ++AVA LVLD+H +VV V AGVHLE  VHP P AR P VLD E SG A+LVGL
Sbjct: 299 LHELHRRQVAVAVLVLDEHGEVVGVGAGVHLEGYVHPPPVARDPCVLDLETSGRAKLVGL 120

                  
Query: 600 AGLRHGS 620
           AGLRH +
Sbjct: 119 AGLRHAA 99

 Score = 90.0 bits (190), Expect(2) = 2e-041
 Identities = 37/51 (72%), Positives = 39/51 (76%)
 Frame = +1 / -3

                                                              
Query: 223 LTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHD 375
           LTTER V PG  PAGMT LAT VLPE +VRRTEKG C + PEL LHT PHD
Sbjct: 490 LTTER*VPPGFQPAGMTLLATRVLPELEVRRTEKGACNIGPELYLHTAPHD 338
>gb|BM098205.2|BM098205 EBpi03_SQ002_N14_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
           Hordeum vulgare subsp. vulgare cDNA clone
           EBpi03_SQ002_N14 5', mRNA sequence
          Length = 550

 Score =  131 bits (281), Expect(2) = 3e-055
 Identities = 52/67 (77%), Positives = 59/67 (88%)
 Frame = -2 / +1

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           G MAKPGQADQLR+AGRL+IQY RVPC+W GM +AFKVDAGSN  YLAVL+EYE GDG+L
Sbjct: 85  GGMAKPGQADQLRAAGRLQIQYTRVPCNWRGMHVAFKVDAGSNPYYLAVLIEYEDGDGDL 264

                  
Query: 440 RSVELMQ 420
            SVELM+
Sbjct: 265 SSVELME 285

 Score =  103 bits (220), Expect(2) = 3e-055
 Identities = 40/55 (72%), Positives = 45/55 (81%)
 Frame = -2 / +1

                                                                  
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
           M +SWG VWR NSG  L  PFSVRLTS SG+T+VAS+VIPAGW PG TYRSVVN+
Sbjct: 316 MDRSWGAVWRYNSGPMLHAPFSVRLTSSSGKTLVASNVIPAGWKPGGTYRSVVNY 480

 Score = 99.6 bits (211), Expect(2) = 2e-041
 Identities = 45/67 (67%), Positives = 51/67 (76%)
 Frame = +3 / -2

                                                                       
Query: 420 LHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGAAELVGL 599
           LHELH  ++AVA LVLD+H +VV V AGVHLE  VHP P AR P VLD E SG A+LVGL
Sbjct: 285 LHELHRRQVAVAVLVLDEHGEVVGVGAGVHLEGYVHPPPVARDPCVLDLETSGRAKLVGL 106

                  
Query: 600 AGLRHGS 620
           AGLRH +
Sbjct: 105 AGLRHAA 85

 Score = 90.0 bits (190), Expect(2) = 2e-041
 Identities = 37/51 (72%), Positives = 39/51 (76%)
 Frame = +1 / -3

                                                              
Query: 223 LTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHD 375
           LTTER V PG  PAGMT LAT VLPE +VRRTEKG C + PEL LHT PHD
Sbjct: 476 LTTER*VPPGFQPAGMTLLATRVLPELEVRRTEKGACNIGPELYLHTAPHD 324
>gb|BG369116.2|BG369116 HVSMEi0021M10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
           (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEi0021M10f, mRNA sequence
          Length = 609

 Score =  118 bits (253), Expect(3) = 9e-046
 Identities = 48/67 (71%), Positives = 54/67 (80%)
 Frame = -2 / +1

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           G MAKPGQADQL + GRL+IQY RVPC+W GM   FKVDAG N  YLAVL+EYE GDG+L
Sbjct: 58  GGMAKPGQADQLCAGGRLQIQYTRVPCNWRGMHRTFKVDAGFNPYYLAVLIEYEDGDGDL 237

                  
Query: 440 RSVELMQ 420
            SVELM+
Sbjct: 238 SSVELME 258

 Score = 96.8 bits (205), Expect(3) = 2e-040
 Identities = 43/67 (64%), Positives = 49/67 (73%)
 Frame = +3 / -1

                                                                       
Query: 420 LHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGAAELVGL 599
           LHELH  ++AVA LVLD+H +VV V AGVH E  VHP P AR P VLD E S  A+LVGL
Sbjct: 258 LHELHRRQVAVAVLVLDEHGEVVGVEAGVHFEGTVHPPPVARDPCVLDLETSARAKLVGL 79

                  
Query: 600 AGLRHGS 620
           AGLRH +
Sbjct: 78  AGLRHAA 58

 Score = 76.7 bits (161), Expect(3) = 9e-046
 Identities = 31/45 (68%), Positives = 35/45 (77%)
 Frame = -2 / +1

                                                        
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTP 249
           M +SWG VWR NSG  L  PFSVRLTS SG+T+VAS+VIPAG  P
Sbjct: 289 MDRSWGAVWRYNSGPMLHAPFSVRLTSSSGKTLVASNVIPAG*KP 423

 Score = 76.2 bits (160), Expect(3) = 2e-040
 Identities = 30/42 (71%), Positives = 32/42 (76%)
 Frame = +1 / -2

                                                     
Query: 250 GVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHD 375
           G  PAGMT LAT VLPE +VRRTEKG C + PEL LHT PHD
Sbjct: 422 GFQPAGMTLLATRVLPELEVRRTEKGACNIGPELYLHTAPHD 297

 Score = 31.3 bits (62), Expect(3) = 2e-040
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +2 / -2

                                 
Query: 98  HTHSSNHKPSQRHAFHSVQAGG 163
           H HSS HKP  RHA    QA G
Sbjct: 554 HAHSSKHKPGWRHASVYGQARG 489

 Score = 26.3 bits (51), Expect(3) = 9e-046
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3 / +3

                                     
Query: 175 ARPPAASLDGVEGVALAWFMIRAVRV 98
           AR  AA L    GVA +WFM  A+ V
Sbjct: 477 ARKHAARLPVYRGVAPSWFMFGAMGV 554
>gb|BI950777.1|BI950777 HVSMEl0023C15f Hordeum vulgare spike EST library HVcDNA0012
           (Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
           clone HVSMEl0023C15f, mRNA sequence
          Length = 986

 Score = 97.7 bits (207), Expect(2) = 1e-038
 Identities = 38/67 (56%), Positives = 51/67 (76%)
 Frame = -2 / +3

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           GAMAKPG AD+LR+ G +R+QY RVPC + G++IAFKVD GSN  Y   L+E+E  DG+L
Sbjct: 195 GAMAKPGMADKLRAGGVIRMQYKRVPCKYPGVNIAFKVDQGSNPFYFKTLIEFEDDDGDL 374

                  
Query: 440 RSVELMQ 420
           ++V L +
Sbjct: 375 KAVALKE 395

 Score = 81.7 bits (172), Expect(2) = 1e-038
 Identities = 31/55 (56%), Positives = 41/55 (74%)
 Frame = -2 / +3

                                                                  
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
           M Q WG +WR N+G  L+ PFS++LTS SGR +V ++VI A W  GATYRS+VN+
Sbjct: 420 MTQDWGALWRLNNGNRLRAPFSLQLTSDSGRKLVINNVILANWNAGATYRSLVNY 584
>gb|BQ759881.1|BQ759881 EBpi05_SQ004_P16_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
           Hordeum vulgare subsp. vulgare cDNA clone
           EBpi05_SQ004_P16 5', mRNA sequence
          Length = 500

 Score = 91.3 bits (193), Expect(2) = 3e-038
 Identities = 36/67 (53%), Positives = 50/67 (74%)
 Frame = -2 / +2

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           GAMAKPG +++LR +G + IQ+ RVPC + G+ + F V+ GSN  Y AVLVEYE GDG++
Sbjct: 32  GAMAKPGLSEKLRHSGIIDIQFKRVPCEFPGLKVTFHVEQGSNPVYFAVLVEYEDGDGDV 211

                  
Query: 440 RSVELMQ 420
             V+LM+
Sbjct: 212 VQVDLME 232

 Score = 86.8 bits (183), Expect(2) = 3e-038
 Identities = 31/56 (55%), Positives = 42/56 (75%)
 Frame = -2 / +2

                                                                   
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
           M++SWG +WR +SG  LQ PFS+R+T+ SG+T+VA  VIPA W P   YRS+V +S
Sbjct: 257 MRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRSIVQYS 424
>gb|AV917139.1|AV917139 AV917139 K. Sato unpublished cDNA library, cv. Haruna Nijo
           germination shoots Hordeum vulgare subsp. vulgare cDNA
           clone bags20o17 5', mRNA sequence
          Length = 590

 Score = 91.3 bits (193), Expect(2) = 3e-037
 Identities = 35/67 (52%), Positives = 51/67 (76%)
 Frame = -2 / +1

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           G +AKPG+ D+LR AG + IQ+ RV C + G+ + F V+ GSNA Y+A+LVEYE+GDG++
Sbjct: 109 GKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDV 288

                  
Query: 440 RSVELMQ 420
             V+LM+
Sbjct: 289 VQVDLME 309

 Score = 83.5 bits (176), Expect(2) = 3e-037
 Identities = 30/60 (50%), Positives = 42/60 (70%)
 Frame = -2 / +1

                                                                       
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFSN*RW 204
           M++SWG +WR +S   LQ PFS+R+ + SG+T+VA +VIP  W P   YRS+V +S  RW
Sbjct: 349 MRESWGSIWRLDSNHRLQAPFSIRIRNESGKTLVARNVIPKNWRPNTFYRSIVQYS*IRW 528
>gb|CV055940.1|CV055940 BNEL12B5 Barley EST endosperm library Hordeum vulgare subsp.
           vulgare cDNA clone BNEL12B5 5' similar to Oryza sativa
           beta-expansin, mRNA sequence
          Length = 614

 Score = 91.3 bits (193), Expect(2) = 2e-035
 Identities = 33/67 (49%), Positives = 52/67 (77%)
 Frame = -2 / -2

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           GAMAK G+ D+LR AG + +Q+ RVPC + G+ + F V+ GSN  Y+A+LVEYE+GDG++
Sbjct: 598 GAMAKYGRNDELRHAGIINMQFKRVPCQYPGLTVTFHVEEGSNPFYMAILVEYENGDGDV 419

                  
Query: 440 RSVELMQ 420
           + +++M+
Sbjct: 418 KQLDIME 398

 Score = 77.1 bits (162), Expect(2) = 2e-035
 Identities = 27/55 (49%), Positives = 39/55 (70%)
 Frame = -2 / -2

                                                                  
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
           M++SWG +WR ++   + GPFS+R+T+ SG+T+VA  VIP  W P  TY S+V F
Sbjct: 340 MKESWGSIWRMDAHHPMHGPFSLRVTNESGKTLVADQVIPGDWKPNKTYSSLVQF 176
>gb|BF260026.3|BF260026 HVSMEf0020O13f Hordeum vulgare seedling root EST library HVcDNA0007
           (Etiolated and unstressed) Hordeum vulgare subsp.
           vulgare cDNA clone HVSMEf0020O13f, mRNA sequence
          Length = 535

 Score = 86.8 bits (183), Expect(2) = 2e-034
 Identities = 32/56 (57%), Positives = 42/56 (75%)
 Frame = -2 / +1

                                                                   
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
           M++SWG +WR +S   LQGPFS+R+TS SG+ +VA++VIPA W P   YRS V FS
Sbjct: 238 MRESWGSIWRMDSNHRLQGPFSMRITSDSGKKLVANNVIPANWRPNTDYRSFVQFS 405

 Score = 78.5 bits (165), Expect(2) = 2e-034
 Identities = 33/67 (49%), Positives = 48/67 (71%)
 Frame = -2 / +1

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           GA+AK G  ++LR +G + IQ+ RVPC++ G+ I F V  GSNA YLAVL+EYE  DG++
Sbjct: 13  GALAKSGLNEKLRHSGIIDIQFRRVPCNFPGLKINFHVVEGSNAVYLAVLIEYEDMDGDV 192

                  
Query: 440 RSVELMQ 420
             V++ +
Sbjct: 193 IQVDMKE 213
>gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
           MPMGp2010P122 5-PRIME, mRNA sequence
          Length = 717

 Score = 83.5 bits (176), Expect(2) = 4e-034
 Identities = 34/67 (50%), Positives = 47/67 (70%)
 Frame = -2 / +1

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           G +AKPG  D+LR +G + I++ RVPC + G+ I F V+  SN  Y AVLVEYE GDG++
Sbjct: 187 GRLAKPGLNDRLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDV 366

                  
Query: 440 RSVELMQ 420
             V+LM+
Sbjct: 367 VQVDLME 387

 Score = 80.8 bits (170), Expect(2) = 4e-034
 Identities = 30/56 (53%), Positives = 40/56 (71%)
 Frame = -2 / +1

                                                                   
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
           M++SWG VWR +S   LQ PFS+R+ + SG+T+VA+ VIPA W P   YRS V +S
Sbjct: 421 MRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPNTFYRSFVQYS 588
>gb|CV058074.1|CV058074 BNEL34a7 Barley EST endosperm library Hordeum vulgare subsp.
           vulgare cDNA clone BNEL34a7 5' similar to Oryza sativa
           beta-expansin, mRNA sequence
          Length = 630

 Score = 91.3 bits (193), Expect(2) = 4e-034
 Identities = 33/67 (49%), Positives = 52/67 (77%)
 Frame = -2 / +3

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           GAMAK G+ D+LR AG + +Q+ RVPC + G+ + F V+ GSN  Y+A+LVEYE+GDG++
Sbjct: 30  GAMAKYGRNDELRHAGIINMQFKRVPCQYPGLTVTFHVEEGSNPFYMAILVEYENGDGDV 209

                  
Query: 440 RSVELMQ 420
           + +++M+
Sbjct: 210 KQLDIME 230

 Score = 73.0 bits (153), Expect(2) = 4e-034
 Identities = 26/55 (47%), Positives = 38/55 (69%)
 Frame = -2 / +3

                                                                  
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
           M++SWG +WR ++   + GPFS+R+T+ SG+T+VA  VI   W P  TY S+V F
Sbjct: 288 MKESWGSIWRMDAHHPMHGPFSLRVTNESGKTLVADQVIXGDWKPNKTYSSLVQF 452
>gb|BE060246.3|BE060246 HVSMEg0011L08f Hordeum vulgare pre-anthesis spike EST library
           HVcDNA0008 (white to yellow anther) Hordeum vulgare
           subsp. vulgare cDNA clone HVSMEg0011L08f, mRNA sequence
          Length = 544

 Score = 83.5 bits (176), Expect(2) = 4e-034
 Identities = 34/67 (50%), Positives = 47/67 (70%)
 Frame = -2 / +2

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           G +AKPG  D+LR +G + I++ RVPC + G+ I F V+  SN  Y AVLVEYE GDG++
Sbjct: 59  GRLAKPGLNDRLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDV 238

                  
Query: 440 RSVELMQ 420
             V+LM+
Sbjct: 239 VQVDLME 259

 Score = 80.8 bits (170), Expect(2) = 4e-034
 Identities = 30/56 (53%), Positives = 40/56 (71%)
 Frame = -2 / +2

                                                                   
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
           M++SWG VWR +S   LQ PFS+R+ + SG+T+VA+ VIPA W P   YRS V +S
Sbjct: 293 MRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPNTFYRSFVQYS 460
>gb|BG368109.2|BG368109 HVSMEi0015L12f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
           (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEi0015L12f, mRNA sequence
          Length = 871

 Score =  131 bits (281), Expect(2) = 6e-034
 Identities = 52/67 (77%), Positives = 59/67 (88%)
 Frame = -2 / +1

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           G MAKPGQADQLR+AGRL+IQY RVPC+W GM +AFKVDAGSN  YLAVL+EYE GDG+L
Sbjct: 313 GGMAKPGQADQLRAAGRLQIQYTRVPCNWRGMHVAFKVDAGSNPYYLAVLIEYEDGDGDL 492

                  
Query: 440 RSVELMQ 420
            SVELM+
Sbjct: 493 SSVELME 513

 Score = 97.7 bits (207), Expect(2) = 3e-023
 Identities = 44/67 (65%), Positives = 51/67 (76%)
 Frame = +3 / -2

                                                                       
Query: 420 LHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGAAELVGL 599
           LH+LH  ++AVA LVLD+H +VV V AGVHLE  VHP P AR P VLD E SG A+LVGL
Sbjct: 513 LHKLHRGQVAVAVLVLDEHGEVVGVGAGVHLEGYVHPPPVARDPCVLDLETSGRAKLVGL 334

                  
Query: 600 AGLRHGS 620
           AGLRH +
Sbjct: 333 AGLRHAA 313

 Score = 32.2 bits (64), Expect(2) = 6e-034
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2 / +3

                              
Query: 377 QSWGXVWRXNSGATLQGPF 321
           +SWG VWR NS   L  PF
Sbjct: 552 RSWGAVWRVNSRPMLHAPF 608

 Score = 30.4 bits (60), Expect(2) = 3e-023
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1 / -1

                               
Query: 316 TEKGPCRVAPELXLHTXPHD 375
           ++KG C +  EL LHT P D
Sbjct: 613 SQKGACNMGRELTLHTAPQD 554
>gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedling shoot EST library
           HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
           cDNA clone HVSMEa0002I16f, mRNA sequence
          Length = 851

 Score = 90.4 bits (191), Expect(2) = 1e-032
 Identities = 35/67 (52%), Positives = 50/67 (74%)
 Frame = -2 / +2

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           GAMAK G+ ++LR AG + +Q+ RVPC + G+ + F V  GSN  YLA+LVEYE+GDG++
Sbjct: 329 GAMAKDGRNEELRHAGIIDMQFRRVPCQYPGLTVTFHVQHGSNPYYLAILVEYENGDGDV 508

                  
Query: 440 RSVELMQ 420
             V++MQ
Sbjct: 509 DQVDMMQ 529

 Score = 69.3 bits (145), Expect(2) = 1e-032
 Identities = 24/53 (45%), Positives = 35/53 (66%)
 Frame = -2 / +2

                                                                
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVV 225
           M +SWG +WR ++   +QGPFS+R+T+ SG+T+VA  V P  W P   Y S +
Sbjct: 590 MTESWGSIWRMDTRRPMQGPFSLRITNESGKTLVADQVNPGDWEPNEIYSSFI 748
>gb|BG368126.2|BG368126 HVSMEi0015M21f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
           (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEi0015M21f, mRNA sequence
          Length = 817

 Score =  131 bits (281), Expect(2) = 1e-032
 Identities = 52/67 (77%), Positives = 59/67 (88%)
 Frame = -2 / +3

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           G MAKPGQADQLR+AGRL+IQY RVPC+W GM +AFKVDAGSN  YLAVL+EYE GDG+L
Sbjct: 453 GGMAKPGQADQLRAAGRLQIQYTRVPCNWRGMHVAFKVDAGSNPYYLAVLIEYEDGDGDL 632

                  
Query: 440 RSVELMQ 420
            SVELM+
Sbjct: 633 SSVELME 653

 Score = 27.6 bits (54), Expect(2) = 1e-032
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -2 / +1

                                      
Query: 371 WGXVWRXNSGATLQGPFSVRLTSGSGR 291
           WG  WR N G     PF V   + S R
Sbjct: 697 WGAGWRSNFGPMWMRPFWVASPAASAR 777
>gb|BG368652.1|BG368652 HVSMEi0020B24f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
           (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEi0020B24f, mRNA sequence
          Length = 679

 Score =  129 bits (276), Expect(2) = 6e-032
 Identities = 51/67 (76%), Positives = 58/67 (86%)
 Frame = -2 / +1

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           G MAKPGQADQLR+AGRL+IQY R PC+W GM +AFKVDAGSN  YLAVL+EYE GDG+L
Sbjct: 403 GGMAKPGQADQLRAAGRLQIQYTRFPCNWRGMHVAFKVDAGSNPYYLAVLIEYEDGDGDL 582

                  
Query: 440 RSVELMQ 420
            SVELM+
Sbjct: 583 SSVELME 603

 Score = 27.6 bits (54), Expect(2) = 6e-032
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -2 / +1

                        
Query: 383 MQQSWGXVWRXNS 345
           M  SWG VWR NS
Sbjct: 634 MDPSWGAVWRYNS 672
>gb|AV928430.1|AV928430 AV928430 K. Sato unpublished cDNA library, cv. Haruna Nijo second
           leaf stage seedling leaves Hordeum vulgare subsp.
           vulgare cDNA clone basdg18 3', mRNA sequence
          Length = 704

 Score = 86.8 bits (183), Expect(2) = 4e-031
 Identities = 32/56 (57%), Positives = 42/56 (75%)
 Frame = -2 / -2

                                                                   
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
           M++SWG +WR +S   LQGPFS+R+TS SG+ +VA++VIPA W P   YRS V FS
Sbjct: 508 MRESWGSIWRMDSNHRLQGPFSMRITSDSGKKLVANNVIPANWRPNTDYRSFVQFS 341

 Score = 67.5 bits (141), Expect(2) = 4e-031
 Identities = 28/57 (49%), Positives = 41/57 (71%)
 Frame = -2 / -2

                                                                    
Query: 590 QLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
           +LR +G + IQ+ RVPC++ G+ I F V  GSNA YLAVL+EYE  DG++  V++ +
Sbjct: 703 KLRHSGIIDIQFRRVPCNFPGLKINFHVVEGSNAVYLAVLIEYEDMDGDVIQVDMKE 533
>gb|CA017263.1|CA017263 HV14A15u HV Hordeum vulgare subsp. vulgare cDNA clone HV14A15
           3-PRIME, mRNA sequence
          Length = 569

 Score = 83.5 bits (176), Expect(2) = 1e-030
 Identities = 30/60 (50%), Positives = 42/60 (70%)
 Frame = -2 / -2

                                                                       
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFSN*RW 204
           M++SWG +WR +S   LQ PFS+R+ + SG+T+VA +VIP  W P   YRS+V +S  RW
Sbjct: 373 MRESWGSIWRLDSNHRLQAPFSIRIRNESGKTLVARNVIPKNWRPNTFYRSIVQYS*IRW 194

 Score = 69.3 bits (145), Expect(2) = 1e-030
 Identities = 26/52 (50%), Positives = 39/52 (75%)
 Frame = -2 / -2

                                                               
Query: 575 GRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
           G + IQ+ RV C + G+ + F V+ GSNA Y+A+LVEYE+GDG++  V+LM+
Sbjct: 568 GIIDIQFTRVACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLME 413
>gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedling root EST library HVcDNA0007
           (Etiolated and unstressed) Hordeum vulgare subsp.
           vulgare cDNA clone HVSMEf0003B13f, mRNA sequence
          Length = 789

 Score = 91.3 bits (193), Expect(2) = 3e-030
 Identities = 35/67 (52%), Positives = 51/67 (76%)
 Frame = -2 / +2

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           G +AKPG+ D+LR AG + IQ+ RV C + G+ + F V+ GSNA Y+A+LVEYE+GDG++
Sbjct: 248 GKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDV 427

                  
Query: 440 RSVELMQ 420
             V+LM+
Sbjct: 428 VQVDLME 448

 Score = 60.2 bits (125), Expect(2) = 3e-030
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = -2 / +2

                                                              
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRS 231
           M++SWG +WR +S   LQ PFS+R+ + SG+T+VA  VIP    P   Y S
Sbjct: 488 MRESWGFIWRLDSNHRLQAPFSIRIRNESGQTLVAR*VIPKKGRPNTLYCS 640
>gb|BF257093.3|BF257093 HVSMEf0011N11f Hordeum vulgare seedling root EST library HVcDNA0007
           (Etiolated and unstressed) Hordeum vulgare subsp.
           vulgare cDNA clone HVSMEf0011N11f, mRNA sequence
          Length = 816

 Score =  106 bits (226), Expect(3) = 3e-030
 Identities = 42/67 (62%), Positives = 55/67 (82%)
 Frame = -2 / +2

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           GAMAKPG AD+LR++G ++IQY RVPC + GM+IAFKVD GSN  YL VL+E+E  DG+L
Sbjct: 245 GAMAKPGMADKLRASGIVKIQYKRVPCKYPGMNIAFKVDQGSNPFYLEVLIEFEDDDGDL 424

                  
Query: 440 RSVELMQ 420
            +V+LM+
Sbjct: 425 NTVDLME 445

 Score = 33.1 bits (66), Expect(3) = 3e-030
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2 / +1

                              
Query: 275 DVIPAGWTPGATYRSVVNF 219
           +V P  W  GATYRS+VN+
Sbjct: 586 NVFPVSWKAGATYRSLVNY 642

 Score = 29.5 bits (58), Expect(3) = 3e-030
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -2 / +2

                             
Query: 350 NSGATLQGPFSVRLTSGS 297
           N+G  L+GPFS+R+TS S
Sbjct: 509 NTGKPLRGPFSLRVTSDS 562
>gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
           MPMGp2010F166 5-PRIME, mRNA sequence
          Length = 750

 Score = 91.3 bits (193), Expect(2) = 4e-030
 Identities = 35/67 (52%), Positives = 51/67 (76%)
 Frame = -2 / +1

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           G +AKPG+ D+LR AG + IQ+ RV C + G+ + F V+ GSNA Y+A+LVEYE+GDG++
Sbjct: 304 GKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDV 483

                  
Query: 440 RSVELMQ 420
             V+LM+
Sbjct: 484 VQVDLME 504

 Score = 59.7 bits (124), Expect(2) = 4e-030
 Identities = 21/40 (52%), Positives = 31/40 (77%)
 Frame = -2 / +1

                                                   
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIP 264
           M++SWG +WR +S   LQ PFS+R+ + SG+T+VA +VIP
Sbjct: 544 MRESWGSIWRLDSNHRLQAPFSIRIRNESGKTLVARNVIP 663
>gb|BJ463021.1|BJ463021 BJ463021 K. Sato unpublished cDNA library, cv. Haruna Nijo
           germination shoots Hordeum vulgare subsp. vulgare cDNA
           clone bags25g15 5', mRNA sequence
          Length = 532

 Score = 96.4 bits (204), Expect(2) = 4e-030
 Identities = 37/67 (55%), Positives = 51/67 (76%)
 Frame = -2 / +3

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           GAMAKPG AD+LR+ G +R+QY RVPC + G++IAF+VD GSN  Y   L+E+E  DG+L
Sbjct: 189 GAMAKPGMADKLRAGGVIRMQYKRVPCKYPGVNIAFRVDQGSNPFYFKTLIEFEDDDGDL 368

                  
Query: 440 RSVELMQ 420
           ++V L +
Sbjct: 369 KAVALKE 389

 Score = 54.7 bits (113), Expect(2) = 4e-030
 Identities = 20/38 (52%), Positives = 27/38 (71%)
 Frame = -2 / +3

                                                 
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDV 270
           M Q WG +WR N+G  L+ PFS+RLT  SGR +V ++V
Sbjct: 414 MTQDWGALWRLNNGNRLRAPFSLRLTXDSGRKLVXNNV 527
>gb|BQ459308.1|BQ459308 HA01I15r HA Hordeum vulgare subsp. vulgare cDNA clone HA01I15
           5-PRIME, mRNA sequence
          Length = 396

 Score = 79.9 bits (168), Expect(2) = 2e-029
 Identities = 27/61 (44%), Positives = 46/61 (75%)
 Frame = -2 / +2

                                                                       
Query: 602 GQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELM 423
           G  D+LR AG + +Q+ RVPC + G+ + F V+ GSN  Y+A+LVEY++GDG+++ +++M
Sbjct: 2   GTRDELRHAGIINMQFKRVPCQYPGLTVTFHVEEGSNPFYMAILVEYDNGDGDVKQLDIM 181

            
Query: 422 Q 420
           +
Sbjct: 182 E 184

 Score = 68.9 bits (144), Expect(2) = 2e-029
 Identities = 24/51 (47%), Positives = 36/51 (70%)
 Frame = -2 / +2

                                                              
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRS 231
           M++SWG +WR ++   ++GPF +R+T+ SG+T+VA  VIP  W P  TY S
Sbjct: 242 MKESWGSIWRMDAHHPMRGPFWLRVTNESGKTLVADKVIPGDWKPNKTYSS 394
>gb|CK124171.1|CK124171 BES1824107e17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
           MPMGp2010E177 5-PRIME, mRNA sequence
          Length = 751

 Score = 80.8 bits (170), Expect(2) = 4e-028
 Identities = 30/56 (53%), Positives = 40/56 (71%)
 Frame = -2 / +1

                                                                   
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
           M++SWG VWR +S   LQ PFS+R+ + SG+T+VA+ VIPA W P   YRS V +S
Sbjct: 184 MRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPNTFYRSFVQYS 351

 Score = 63.4 bits (132), Expect(2) = 4e-028
 Identities = 25/48 (52%), Positives = 34/48 (70%)
 Frame = -2 / +1

                                                           
Query: 563 IQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
           I++ RVPC + G+ I F V+  SN  Y AVLVEYE GDG++  V+LM+
Sbjct: 7   IEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLME 150
>gb|BQ470849.1|BQ470849 HX04D14r HX Hordeum vulgare subsp. vulgare cDNA clone HX04D14
           5-PRIME, mRNA sequence
          Length = 606

 Score = 79.0 bits (166), Expect(2) = 4e-028
 Identities = 27/55 (49%), Positives = 39/55 (70%)
 Frame = -2 / +2

                                                                  
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
           M +SWG +WR ++   +QGPFS+R+T+ SG+T+VA  VIPA W P   Y S++ F
Sbjct: 197 MTESWGSIWRMDTRRPMQGPFSLRITNESGKTLVADQVIPADWEPNEIYSSIIQF 361

 Score = 65.2 bits (136), Expect(2) = 4e-028
 Identities = 24/44 (54%), Positives = 33/44 (75%)
 Frame = -2 / +2

                                                       
Query: 551 RVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
           RVPC + G+ + F V  GSN  YLA+LVEYE+GDG++  V++MQ
Sbjct: 5   RVPCQYPGLTVTFHVQHGSNPYYLAILVEYENGDGDVDQVDMMQ 136
>gb|BM101447.2|BM101447 EBpi01_SQ003_O01_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
           Hordeum vulgare subsp. vulgare cDNA clone
           EBpi01_SQ003_O01 5', mRNA sequence
          Length = 452

 Score = 83.5 bits (176), Expect(2) = 6e-028
 Identities = 30/60 (50%), Positives = 42/60 (70%)
 Frame = -2 / +1

                                                                       
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFSN*RW 204
           M++SWG +WR +S   LQ PFS+R+ + SG+T+VA +VIP  W P   YRS+V +S  RW
Sbjct: 169 MRESWGSIWRLDSNHRLQAPFSIRIRNESGKTLVARNVIPKNWRPNTFYRSIVQYS*IRW 348

 Score = 60.2 bits (125), Expect(2) = 6e-028
 Identities = 22/43 (51%), Positives = 33/43 (76%)
 Frame = -2 / +1

                                                      
Query: 548 VPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
           V C + G+ + F V+ GSNA Y+A+LVEYE+GDG++  V+LM+
Sbjct: 1   VACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLME 129
>gb|BQ459628.1|BQ459628 HA08J01r HA Hordeum vulgare subsp. vulgare cDNA clone HA08J01
           5-PRIME, mRNA sequence
          Length = 470

 Score = 80.8 bits (170), Expect(2) = 4e-027
 Identities = 30/56 (53%), Positives = 40/56 (71%)
 Frame = -2 / +1

                                                                   
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
           M++SWG VWR +S   LQ PFS+R+ + SG+T+VA+ VIPA W P   YRS V +S
Sbjct: 253 MRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPNTFYRSFVQYS 420

 Score = 60.2 bits (125), Expect(2) = 4e-027
 Identities = 25/49 (51%), Positives = 33/49 (67%)
 Frame = -2 / +1

                                                            
Query: 566 RIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
           R +  RVPC + G+ I F V+  SN  Y AVLVEYE GDG++  V+LM+
Sbjct: 73  RHRVTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLME 219
>gb|BE454367.2|BE454367 HVSMEh0093N18f Hordeum vulgare 5-45 DAP spike EST library
           HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
           cDNA clone HVSMEh0093N18f, mRNA sequence
          Length = 870

 Score = 83.5 bits (176), Expect(2) = 1e-026
 Identities = 34/67 (50%), Positives = 47/67 (70%)
 Frame = -2 / +1

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           G +AKPG  D+LR +G + I++ RVPC + G+ I F V+  SN  Y AVLVEYE GDG++
Sbjct: 70  GRLAKPGLNDRLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDV 249

                  
Query: 440 RSVELMQ 420
             V+LM+
Sbjct: 250 VQVDLME 270

 Score = 55.6 bits (115), Expect(2) = 1e-026
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = -2 / +1

                                                               
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSV 228
           M++SWG VWR N    LQ PF +++    G T+  S  +P  W PG   R V
Sbjct: 304 MRESWGSVWRLNCNHRLQAPFCIQVRDKCGETLGGSMGVPGRWRPGTLCRCV 459
>gb|BM097618.2|BM097618 EBem04_SQ002_D15_R embryo, 12 DPA, no treatment, cv Optic, EBem04
           Hordeum vulgare subsp. vulgare cDNA clone
           EBem04_SQ002_D15 5', mRNA sequence
          Length = 477

 Score = 95.0 bits (201), Expect(2) = 6e-026
 Identities = 36/67 (53%), Positives = 51/67 (76%)
 Frame = -2 / +3

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           GAMAK G+ D+LR AG + +Q+ RVPC + G+ + F+V  GSN NYLA+LVEYE GDG++
Sbjct: 153 GAMAKYGRNDELRHAGIIDMQFKRVPCQYPGLTVTFRVQHGSNPNYLAILVEYEDGDGDV 332

                  
Query: 440 RSVELMQ 420
             V++M+
Sbjct: 333 AQVDIME 353

 Score = 41.8 bits (85), Expect(2) = 6e-026
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -2 / +3

                                     
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLT 306
           M++SWG +WR +    LQGPFS+R+T
Sbjct: 396 MRESWGSIWRLDRLRPLQGPFSLRVT 473
>gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
           MPMGp2010J225 5-PRIME, mRNA sequence
          Length = 776

 Score = 91.3 bits (193), Expect(2) = 1e-024
 Identities = 35/67 (52%), Positives = 51/67 (76%)
 Frame = -2 / +1

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           G +AKPG+ D+LR AG + IQ+ RV C + G+ + F V+ GSNA Y+A+LVEYE+GDG++
Sbjct: 421 GKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDV 600

                  
Query: 440 RSVELMQ 420
             V+LM+
Sbjct: 601 VQVDLME 621

 Score = 41.4 bits (84), Expect(2) = 1e-024
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -2 / +3

                                                 
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDV 270
           M +SWG +W  +S   LQ P S+R+ + SG+ + A +V
Sbjct: 663 MPESWGSIWGLDSXNRLQXPXSIRIRNESGKKLXARNV 776
>gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachis EST library HVcDNA0015
           (normal) Hordeum vulgare subsp. vulgare cDNA clone
           HVSMEn0018F10f, mRNA sequence
          Length = 669

 Score = 92.7 bits (196), Expect(2) = 1e-024
 Identities = 37/67 (55%), Positives = 50/67 (74%)
 Frame = -2 / +3

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           GAMAKPG +++LR +G + IQ+ RVPC + G+ + F V+ GSN  Y AVLVEYE GDG+L
Sbjct: 369 GAMAKPGLSEKLRHSGIIDIQFKRVPCEFPGLKVTFHVEQGSNPVYFAVLVEYEDGDGDL 548

                  
Query: 440 RSVELMQ 420
             V+LM+
Sbjct: 549 VQVDLME 569

 Score = 40.0 bits (81), Expect(2) = 1e-024
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -2 / +1

                                  
Query: 383 MQQSWGXVWRXNSGATLQGPFSV 315
           M++SWG +WR  SG  LQ PFS+
Sbjct: 595 MRESWGSIWRVESGHRLQAPFSM 663
>gb|CB880652.1|CB880652 HM07E17w HM Hordeum vulgare subsp. vulgare cDNA clone HM07E17
           3-PRIME, mRNA sequence
          Length = 562

 Score = 86.8 bits (183), Expect(2) = 2e-024
 Identities = 31/56 (55%), Positives = 42/56 (75%)
 Frame = -2 / -2

                                                                   
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
           M++SWG +WR +SG  LQ PFS+R+T+ SG+T+VA  VIPA W P   YRS+V +S
Sbjct: 444 MRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRSIVQYS 277

 Score = 45.1 bits (92), Expect(2) = 2e-024
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = -2 / -2

                                         
Query: 509 VDAGSNANYLAVLVEYESGDGELRSVELMQ 420
           V+ GSN  Y AVLVEYE GDG++  V+LM+
Sbjct: 558 VEQGSNPVYFAVLVEYEDGDGDVVQVDLME 469
>gb|CB881234.1|CB881234 HM09C23w HM Hordeum vulgare subsp. vulgare cDNA clone HM09C23
           3-PRIME, mRNA sequence
          Length = 563

 Score = 86.8 bits (183), Expect(2) = 2e-024
 Identities = 31/56 (55%), Positives = 42/56 (75%)
 Frame = -2 / -2

                                                                   
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
           M++SWG +WR +SG  LQ PFS+R+T+ SG+T+VA  VIPA W P   YRS+V +S
Sbjct: 445 MRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRSIVQYS 278

 Score = 45.1 bits (92), Expect(2) = 2e-024
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = -2 / -2

                                         
Query: 509 VDAGSNANYLAVLVEYESGDGELRSVELMQ 420
           V+ GSN  Y AVLVEYE GDG++  V+LM+
Sbjct: 559 VEQGSNPVYFAVLVEYEDGDGDVVQVDLME 470
>gb|BQ465138.1|BQ465138 HU02M06r HU Hordeum vulgare subsp. vulgare cDNA clone HU02M06
           5-PRIME, mRNA sequence
          Length = 623

 Score = 91.3 bits (193), Expect(2) = 3e-024
 Identities = 35/67 (52%), Positives = 51/67 (76%)
 Frame = -2 / +2

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           G +AKPG+ D+LR AG + IQ+ RV C + G+ + F V+ GSNA Y+A+LVEYE+GDG++
Sbjct: 269 GKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDV 448

                  
Query: 440 RSVELMQ 420
             V+LM+
Sbjct: 449 VQVDLME 469

 Score = 40.0 bits (81), Expect(2) = 3e-024
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = -2 / +3

                                         
Query: 359 WRXNSGATLQGPFSVRLTSGSGRTVVASDV 270
           WR +S   LQ PFS+R+ + SG+T+VA +V
Sbjct: 534 WRLDSNHRLQAPFSIRIRNESGKTLVARNV 623
>gb|BF253787.2|BF253787 HVSMEf0002C01f Hordeum vulgare seedling root EST library HVcDNA0007
           (Etiolated and unstressed) Hordeum vulgare subsp.
           vulgare cDNA clone HVSMEf0002C01f, mRNA sequence
          Length = 823

 Score = 90.9 bits (192), Expect(2) = 2e-023
 Identities = 35/67 (52%), Positives = 51/67 (76%)
 Frame = -2 / +3

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           G +AKPG+ D+LR AG + IQ+ RV C + G+ + F V+ GSNA Y+A+LVEYE+GDG++
Sbjct: 72  GKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDV 251

                  
Query: 440 RSVELMQ 420
             V+LM+
Sbjct: 252 VHVDLME 272

 Score = 37.7 bits (76), Expect(2) = 2e-023
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2 / +3

                                                   
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIP 264
           M +SWG +WR      +Q P+S+R+    G T++   +IP
Sbjct: 312 MLKSWGSIWRLYYNHGIQTPYSIRIRCEFG*TLIMRILIP 431
>gb|BE193589.2|BE193589 HVSMEh0081M20f Hordeum vulgare 5-45 DAP spike EST library
           HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
           cDNA clone HVSMEh0081M20f, mRNA sequence
          Length = 520

 Score =  103 bits (220), Expect(2) = 5e-023
 Identities = 40/55 (72%), Positives = 45/55 (81%)
 Frame = -2 / +2

                                                                  
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
           M +SWG VWR NSG  L  PFSVRLTS SG+T+VAS+VIPAGW PG TYRSVVN+
Sbjct: 35  MDRSWGAVWRYNSGPMLHAPFSVRLTSSSGKTLVASNVIPAGWKPGGTYRSVVNY 199

 Score = 90.0 bits (190), Expect(2) = 7e-021
 Identities = 37/51 (72%), Positives = 39/51 (76%)
 Frame = +1 / -2

                                                              
Query: 223 LTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHD 375
           LTTER V PG  PAGMT LAT VLPE +VRRTEKG C + PEL LHT PHD
Sbjct: 195 LTTER*VPPGFQPAGMTLLATRVLPELEVRRTEKGACNIGPELYLHTAPHD 43

 Score = 29.9 bits (59), Expect(2) = 7e-021
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2 / -1

                         
Query: 98  HTHSSNHKPSQRHA 139
           H HSS HKP  RHA
Sbjct: 301 HAHSSKHKPGWRHA 260

 Score = 23.5 bits (45), Expect(2) = 5e-023
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3 / +2

                                     
Query: 175 ARPPAASLDGVEGVALAWFMIRAVRV 98
           AR  AA      GVA +WFM  A+ V
Sbjct: 224 ARKHAARSPVYRGVAPSWFMFGAMGV 301
>gb|CA019924.1|CA019924 HV13L18r HV Hordeum vulgare subsp. vulgare cDNA clone HV13L18
           5-PRIME, mRNA sequence
          Length = 549

 Score =  106 bits (226), Expect = 1e-022
 Identities = 42/67 (62%), Positives = 55/67 (82%)
 Frame = -2 / +3

                                                                       
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
           GAMAKPG AD+LR++G ++IQY RVPC + GM+IAFKVD GSN  YL VL+E+E  DG+L
Sbjct: 261 GAMAKPGMADKLRASGIVKIQYKRVPCKYPGMNIAFKVDQGSNPFYLEVLIEFEDDDGDL 440

                  
Query: 440 RSVELMQ 420
            +V+LM+
Sbjct: 441 NTVDLME 461
>gb|BQ467895.1|BQ467895 HR01E04r HR Hordeum vulgare subsp. vulgare cDNA clone HR01E04
           5-PRIME, mRNA sequence
          Length = 540

 Score = 86.8 bits (183), Expect(2) = 2e-022
 Identities = 32/56 (57%), Positives = 42/56 (75%)
 Frame = -2 / +2

                                                                   
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
           M++SWG +WR +S   LQGPFS+R+TS SG+ +VA++VIPA W P   YRS V FS
Sbjct: 119 MRESWGSIWRMDSNHRLQGPFSMRITSDSGKKLVANNVIPANWRPNTDYRSFVQFS 286

 Score = 38.6 bits (78), Expect(2) = 2e-022
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = -2 / +2

                                      
Query: 500 GSNANYLAVLVEYESGDGELRSVELMQ 420
           GSNA YLAVL+EYE  DG++  V++ +
Sbjct: 14  GSNAVYLAVLIEYEDMDGDVIQVDMKE 94
>gb|BU986289.1|BU986289 HF11E17r HF Hordeum vulgare subsp. vulgare cDNA clone HF11E17
           5-PRIME, mRNA sequence
          Length = 538

 Score = 86.8 bits (183), Expect(2) = 4e-021
 Identities = 31/56 (55%), Positives = 42/56 (75%)
 Frame = -2 / +2

                                                                   
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
           M++SWG +WR +SG  LQ PFS+R+T+ SG+T+VA  VIPA W P   YRS+V +S
Sbjct: 95  MRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRSIVQYS 262

 Score = 34.1 bits (68), Expect(2) = 4e-021
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = -2 / +2

                               
Query: 479 AVLVEYESGDGELRSVELMQ 420
           AVLVEYE GDG++  V+LM+
Sbjct: 11  AVLVEYEDGDGDVVQVDLME 70
  Database: Hordeum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:16 PM
  Number of letters in database: 175,134,539
  Number of sequences in database:  312,970
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 279,713,084
Number of Sequences: 312970
Number of extensions: 4376057
Number of successful extensions: 116920
Number of sequences better than 1.0e-020: 48
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6574589895
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)