TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2621801.2.1
(679 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AB055519.1| Hordeum vulgare mRNA for mitochondrial alde... 341 8e-097
gb|BJ544525.1|BJ544525 BJ544525 K. Sato unpublished cDNA li... 341 8e-097
gb|BJ544355.1|BJ544355 BJ544355 K. Sato unpublished cDNA li... 341 8e-097
gb|BF267540.2|BF267540 HV_CEa0018D16f Hordeum vulgare seedl... 341 2e-093
gb|BF267588.2|BF267588 HV_CEa0018F16f Hordeum vulgare seedl... 220 3e-087
gb|BU972798.1|BU972798 HB22L24r BC Hordeum vulgare subsp. v... 314 4e-085
gb|BM815988.1|BM815988 HC108H09_SK.ab1 HC Hordeum vulgare s... 304 2e-082
gb|BI776695.2|BI776695 EBpi07_SQ001_H11_R pistil, 12 DPA, n... 282 1e-075
gb|BI949913.1|BI949913 HVSMEl0016O20f Hordeum vulgare spike... 270 6e-072
gb|BJ545810.1|BJ545810 BJ545810 K. Sato unpublished cDNA li... 266 7e-071
gb|AV921807.1|AV921807 AV921807 K. Sato unpublished cDNA li... 264 5e-070
gb|BJ545985.1|BJ545985 BJ545985 K. Sato unpublished cDNA li... 253 7e-067
gb|AV917894.1|AV917894 AV917894 K. Sato unpublished cDNA li... 252 1e-066
gb|BJ448569.1|BJ448569 BJ448569 K. Sato unpublished cDNA li... 252 1e-066
gb|BJ456291.1|BJ456291 BJ456291 K. Sato unpublished cDNA li... 252 1e-066
gb|BJ548158.1|BJ548158 BJ548158 K. Sato unpublished cDNA li... 248 3e-065
gb|AW983019.2|AW983019 HVSMEg0004N09f Hordeum vulgare pre-a... 245 2e-064
gb|AV929175.1|AV929175 AV929175 K. Sato unpublished cDNA li... 244 4e-064
gb|CA000617.1|CA000617 HS07N10u HS Hordeum vulgare subsp. v... 244 4e-064
gb|BJ548794.1|BJ548794 BJ548794 K. Sato unpublished cDNA li... 230 6e-060
gb|BU984313.1|BU984313 HF03J09r HF Hordeum vulgare subsp. v... 229 1e-059
gb|AV931272.1|AV931272 AV931272 K. Sato unpublished cDNA li... 221 4e-057
gb|BU981973.1|BU981973 HA25C12r HA Hordeum vulgare subsp. v... 214 4e-055
gb|BJ545493.1|BJ545493 BJ545493 K. Sato unpublished cDNA li... 213 7e-055
gb|BF266942.2|BF266942 HV_CEa0016I01f Hordeum vulgare seedl... 199 4e-054
gb|CA015545.1|CA015545 HT14K09r HT Hordeum vulgare subsp. v... 210 6e-054
gb|BF260792.2|BF260792 HVSMEf0022P08f Hordeum vulgare seedl... 201 2e-052
gb|BE194107.2|BE194107 HVSMEh0084A24f Hordeum vulgare 5-45 ... 196 1e-049
gb|AV913129.1|AV913129 AV913129 K. Sato unpublished cDNA li... 196 1e-049
gb|CA021407.1|CA021407 HZ40A05r HZ Hordeum vulgare subsp. v... 196 1e-049
gb|BQ656750.1|BQ656750 HA02F05u HA Hordeum vulgare subsp. v... 195 2e-049
gb|CA009784.1|CA009784 HT12M08u HT Hordeum vulgare subsp. v... 195 2e-049
gb|CA027624.1|CA027624 HZ59I04r HZ Hordeum vulgare subsp. v... 195 2e-049
gb|BF253896.2|BF253896 HVSMEf0002G19f Hordeum vulgare seedl... 192 6e-049
gb|BJ546487.1|BJ546487 BJ546487 K. Sato unpublished cDNA li... 193 1e-048
gb|BJ546503.1|BJ546503 BJ546503 K. Sato unpublished cDNA li... 193 1e-048
gb|BQ464230.1|BQ464230 HF01L06T HF Hordeum vulgare subsp. v... 191 3e-048
gb|CA018967.1|CA018967 HV10E09r HV Hordeum vulgare subsp. v... 187 7e-047
gb|BG300455.1|BG300455 HVSMEb0017B23f Hordeum vulgare seedl... 184 3e-046
gb|BQ659782.1|BQ659782 HF01L06w HF Hordeum vulgare subsp. v... 179 1e-044
gb|BI948988.1|BI948988 HVSMEl0011N01f Hordeum vulgare spike... 176 1e-043
gb|BQ761582.1|BQ761582 EBem10_SQ001_N02_R embryo, 2 Day ger... 173 1e-042
gb|BQ466268.1|BQ466268 HT02B02r HT Hordeum vulgare subsp. v... 163 8e-040
gb|BJ549890.1|BJ549890 BJ549890 K. Sato unpublished cDNA li... 162 2e-039
gb|BF260313.2|BF260313 HVSMEf0021K17f Hordeum vulgare seedl... 143 2e-034
dbj|AB063178.1| Hordeum vulgare BBD2 mRNA for betaine aldeh... 120 2e-033
gb|BG368878.2|BG368878 HVSMEi0021B19f Hordeum vulgare 20 DA... 120 2e-033
gb|BJ471121.1|BJ471121 BJ471121 K. Sato unpublished cDNA li... 120 2e-033
gb|BJ468318.1|BJ468318 BJ468318 K. Sato unpublished cDNA li... 120 6e-033
dbj|AB063179.1| Hordeum vulgare BBD1 mRNA for betaine aldeh... 115 7e-032
gb|BM371235.1|BM371235 EBro04_SQ003_O18_R root, 3 week, sal... 134 4e-031
gb|CV060332.1|CV060332 BNEL57a10 Barley EST endosperm libra... 134 4e-031
gb|BQ463802.1|BQ463802 HG01H17r HG Hordeum vulgare subsp. v... 134 5e-031
gb|BQ659983.1|BQ659983 HG01H17u HG Hordeum vulgare subsp. v... 132 3e-030
gb|BG299265.1|BG299265 HVSMEa0019A19f Hordeum vulgare seedl... 111 3e-028
gb|AL501734.1|AL501734 AL501734 Hordeum vulgare Barke roots... 123 8e-028
gb|BU990251.1|BU990251 HF24I09r HF Hordeum vulgare subsp. v... 100 1e-027
gb|BM371740.2|BM371740 EBma08_SQ003_M14_R maternal, 28 DPA,... 121 4e-027
gb|BQ767898.1|BQ767898 EBro08_SQ010_K04_R root, 3 week, dro... 120 7e-027
gb|BJ466421.1|BJ466421 BJ466421 K. Sato unpublished cDNA li... 120 1e-026
gb|BJ473517.1|BJ473517 BJ473517 K. Sato unpublished cDNA li... 120 1e-026
gb|BJ475971.1|BJ475971 BJ475971 K. Sato unpublished cDNA li... 120 1e-026
gb|BU986428.1|BU986428 HF11M21r HF Hordeum vulgare subsp. v... 120 1e-026
gb|BU975354.1|BU975354 HB30O13r BC Hordeum vulgare subsp. v... 117 5e-026
gb|CV060030.1|CV060030 BNEL53f12 Barley EST endosperm libra... 117 6e-026
gb|BJ545003.1|BJ545003 BJ545003 K. Sato unpublished cDNA li... 101 5e-025
gb|BJ475564.1|BJ475564 BJ475564 K. Sato unpublished cDNA li... 114 6e-025
gb|BU984894.1|BU984894 HF05G21r HF Hordeum vulgare subsp. v... 91 9e-025
gb|BQ664128.1|BQ664128 HV01P19w HV Hordeum vulgare subsp. v... 113 1e-024
gb|AV832590.1|AV832590 AV832590 K. Sato unpublished cDNA li... 111 4e-024
gb|CB877540.1|CB877540 HP05E21T HP Hordeum vulgare subsp. v... 111 4e-024
gb|CD663937.1|CD663937 UCRHV18_07af09_b1 Drought-stressed D... 110 8e-024
gb|AV834368.1|AV834368 AV834368 K. Sato unpublished cDNA li... 109 2e-023
gb|BJ475484.1|BJ475484 BJ475484 K. Sato unpublished cDNA li... 108 4e-023
gb|BE060881.2|BE060881 HVSMEg0013L09f Hordeum vulgare pre-a... 84 1e-022
gb|BJ545021.1|BJ545021 BJ545021 K. Sato unpublished cDNA li... 94 1e-022
gb|CA016131.1|CA016131 HV10E09u HV Hordeum vulgare subsp. v... 105 3e-022
gb|BQ757766.1|BQ757766 EBem10_SQ005_C19_R embryo, 2 Day ger... 103 9e-022
gb|CV063841.1|CV063841 BNEL93g5 Barley EST endosperm librar... 103 1e-021
gb|BQ663837.1|BQ663837 HU04E06u HU Hordeum vulgare subsp. v... 101 3e-021
gb|BM377612.2|BM377612 EBem04_SQ003_K14_R embryo, 12 DPA, n... 101 3e-021
gb|CA019787.1|CA019787 HV13C16r HV Hordeum vulgare subsp. v... 100 8e-021
>dbj|AB055519.1| Hordeum vulgare mRNA for mitochondrial aldehyde dehydrogenase ALDH2,
complete cds
Length = 2128
Score = 341 bits (739), Expect(2) = 8e-097
Identities = 134/175 (76%), Positives = 160/175 (91%)
Frame = -3 / +1
Query: 623 KRVVGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFA 444
KRVVGDPFR GVEQGPQID EQF KILRY++SGVDSGATLV GGD++G++G+YIQPT+F+
Sbjct: 1207 KRVVGDPFRKGVEQGPQIDDEQFKKILRYIKSGVDSGATLVTGGDKLGDKGYYIQPTIFS 1386
Query: 443 DAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALR 264
D +D+MKIA+EEIFGPVQ+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL+RALR
Sbjct: 1387 DVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALR 1566
Query: 263 AGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
AGT+WVNC+D+FDA IPFGGYKMSG+GREKGI +L+NYLQ KAVVT +KNPAWL*
Sbjct: 1567 AGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 1731
Score = 232 bits (502), Expect = 1e-060
Identities = 114/174 (65%), Positives = 123/174 (70%)
Frame = +1 / -3
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 1730 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 1551
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVG 459
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPNISS AIF+SS S VG
Sbjct: 1550 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVG 1371
Query: 460 CM*KPLSPTLSPPATRVAPLSTPD*TYRKILLNCSPSI*GPCSTPSLKGSPTTR 621
M* PLSP LSPP TRVAPLSTPD RKI LNCS SI*GPCSTP L GSPTTR
Sbjct: 1370 WM**PLSPNLSPPVTRVAPLSTPDLM*RKIFLNCSSSI*GPCSTPFLNGSPTTR 1209
Score = 159 bits (341), Expect = 2e-038
Identities = 83/169 (49%), Positives = 103/169 (60%)
Frame = +3 / -2
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 1728 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 1549
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRL 461
GVGRVQ ++ Q V VR DHL+ ELE+ L+RPEYLL LH +L + ++ L
Sbjct: 1548 GVGRVQVVGKNAGGQSVLACVRPLDHLVEVIELED*LNRPEYLLLGYLHVILHI*ENCWL 1369
Query: 462 YVEAPFAYPVAAGDEGGTAVDAGLNVPQDLVELLAVDLRPLFDPVPEGV 608
V V +GG+ VD LNV QDL+ELL ++LR L + PE +
Sbjct: 1368 DVVTFVTQLVTTRHKGGSTVDTRLNVAQDLLELLIINLRTLLNTFPEWI 1222
Score = 32.7 bits (65), Expect(2) = 8e-097
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +1
Query: 679 FVHERVYDEFVE 644
FVHERVYDEFVE
Sbjct: 1150 FVHERVYDEFVE 1185
>gb|BJ544525.1|BJ544525 BJ544525 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak30h11 5', mRNA sequence
Length = 696
Score = 341 bits (739), Expect(2) = 8e-097
Identities = 134/175 (76%), Positives = 160/175 (91%)
Frame = -3 / +1
Query: 623 KRVVGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFA 444
KRVVGDPFR GVEQGPQID EQF KILRY++SGVDSGATLV GGD++G++G+YIQPT+F+
Sbjct: 121 KRVVGDPFRKGVEQGPQIDDEQFKKILRYIKSGVDSGATLVTGGDKLGDKGYYIQPTIFS 300
Query: 443 DAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALR 264
D +D+MKIA+EEIFGPVQ+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL+RALR
Sbjct: 301 DVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALR 480
Query: 263 AGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
AGT+WVNC+D+FDA IPFGGYKMSG+GREKGI +L+NYLQ KAVVT +KNPAWL*
Sbjct: 481 AGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 645
Score = 232 bits (502), Expect = 1e-060
Identities = 114/174 (65%), Positives = 123/174 (70%)
Frame = +1 / -2
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 644 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 465
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVG 459
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPNISS AIF+SS S VG
Sbjct: 464 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVG 285
Query: 460 CM*KPLSPTLSPPATRVAPLSTPD*TYRKILLNCSPSI*GPCSTPSLKGSPTTR 621
M* PLSP LSPP TRVAPLSTPD RKI LNCS SI*GPCSTP L GSPTTR
Sbjct: 284 WM**PLSPNLSPPVTRVAPLSTPDLM*RKIFLNCSSSI*GPCSTPFLNGSPTTR 123
Score = 159 bits (341), Expect = 2e-038
Identities = 83/169 (49%), Positives = 103/169 (60%)
Frame = +3 / -1
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 642 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 463
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRL 461
GVGRVQ ++ Q V VR DHL+ ELE+ L+RPEYLL LH +L + ++ L
Sbjct: 462 GVGRVQVVGKNAGGQSVLACVRPLDHLVEVIELED*LNRPEYLLLGYLHVILHI*ENCWL 283
Query: 462 YVEAPFAYPVAAGDEGGTAVDAGLNVPQDLVELLAVDLRPLFDPVPEGV 608
V V +GG+ VD LNV QDL+ELL ++LR L + PE +
Sbjct: 282 DVVTFVTQLVTTRHKGGSTVDTRLNVAQDLLELLIINLRTLLNTFPEWI 136
Score = 32.7 bits (65), Expect(2) = 8e-097
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +1
Query: 679 FVHERVYDEFVE 644
FVHERVYDEFVE
Sbjct: 64 FVHERVYDEFVE 99
>gb|BJ544355.1|BJ544355 BJ544355 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak26h06 5', mRNA sequence
Length = 638
Score = 341 bits (739), Expect(2) = 8e-097
Identities = 134/175 (76%), Positives = 160/175 (91%)
Frame = -3 / +1
Query: 623 KRVVGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFA 444
KRVVGDPFR GVEQGPQID EQF KILRY++SGVDSGATLV GGD++G++G+YIQPT+F+
Sbjct: 109 KRVVGDPFRKGVEQGPQIDDEQFKKILRYIKSGVDSGATLVTGGDKLGDKGYYIQPTIFS 288
Query: 443 DAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALR 264
D +D+MKIA+EEIFGPVQ+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL+RALR
Sbjct: 289 DVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALR 468
Query: 263 AGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
AGT+WVNC+D+FDA IPFGGYKMSG+GREKGI +L+NYLQ KAVVT +KNPAWL*
Sbjct: 469 AGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 633
Score = 232 bits (502), Expect = 1e-060
Identities = 114/174 (65%), Positives = 123/174 (70%)
Frame = +1 / -1
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 632 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 453
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVG 459
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPNISS AIF+SS S VG
Sbjct: 452 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVG 273
Query: 460 CM*KPLSPTLSPPATRVAPLSTPD*TYRKILLNCSPSI*GPCSTPSLKGSPTTR 621
M* PLSP LSPP TRVAPLSTPD RKI LNCS SI*GPCSTP L GSPTTR
Sbjct: 272 WM**PLSPNLSPPVTRVAPLSTPDLM*RKIFLNCSSSI*GPCSTPFLNGSPTTR 111
Score = 159 bits (341), Expect = 2e-038
Identities = 83/169 (49%), Positives = 103/169 (60%)
Frame = +3 / -3
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 630 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 451
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRL 461
GVGRVQ ++ Q V VR DHL+ ELE+ L+RPEYLL LH +L + ++ L
Sbjct: 450 GVGRVQVVGKNAGGQSVLACVRPLDHLVEVIELED*LNRPEYLLLGYLHVILHI*ENCWL 271
Query: 462 YVEAPFAYPVAAGDEGGTAVDAGLNVPQDLVELLAVDLRPLFDPVPEGV 608
V V +GG+ VD LNV QDL+ELL ++LR L + PE +
Sbjct: 270 DVVTFVTQLVTTRHKGGSTVDTRLNVAQDLLELLIINLRTLLNTFPEWI 124
Score = 32.7 bits (65), Expect(2) = 8e-097
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +1
Query: 679 FVHERVYDEFVE 644
FVHERVYDEFVE
Sbjct: 52 FVHERVYDEFVE 87
>gb|BF267540.2|BF267540 HV_CEa0018D16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018D16f, mRNA sequence
Length = 803
Score = 341 bits (739), Expect = 2e-093
Identities = 134/175 (76%), Positives = 160/175 (91%)
Frame = -3 / +3
Query: 623 KRVVGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFA 444
KRVVGDPFR GVEQGPQID EQF KILRY++SGVDSGATLV GGD++G++G+YIQPT+F+
Sbjct: 36 KRVVGDPFRKGVEQGPQIDDEQFKKILRYIKSGVDSGATLVTGGDKLGDKGYYIQPTIFS 215
Query: 443 DAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALR 264
D +D+MKIA+EEIFGPVQ+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL+RALR
Sbjct: 216 DVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALR 395
Query: 263 AGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
AGT+WVNC+D+FDA IPFGGYKMSG+GREKGI +L+NYLQ KAVVT +KNPAWL*
Sbjct: 396 AGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 560
Score = 232 bits (502), Expect = 1e-060
Identities = 114/174 (65%), Positives = 123/174 (70%)
Frame = +1 / -2
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 559 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 380
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVG 459
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPNISS AIF+SS S VG
Sbjct: 379 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVG 200
Query: 460 CM*KPLSPTLSPPATRVAPLSTPD*TYRKILLNCSPSI*GPCSTPSLKGSPTTR 621
M* PLSP LSPP TRVAPLSTPD RKI LNCS SI*GPCSTP L GSPTTR
Sbjct: 199 WM**PLSPNLSPPVTRVAPLSTPDLM*RKIFLNCSSSI*GPCSTPFLNGSPTTR 38
Score = 159 bits (341), Expect = 2e-038
Identities = 83/169 (49%), Positives = 103/169 (60%)
Frame = +3 / -1
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 557 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 378
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRL 461
GVGRVQ ++ Q V VR DHL+ ELE+ L+RPEYLL LH +L + ++ L
Sbjct: 377 GVGRVQVVGKNAGGQSVLACVRPLDHLVEVIELED*LNRPEYLLLGYLHVILHI*ENCWL 198
Query: 462 YVEAPFAYPVAAGDEGGTAVDAGLNVPQDLVELLAVDLRPLFDPVPEGV 608
V V +GG+ VD LNV QDL+ELL ++LR L + PE +
Sbjct: 197 DVVTFVTQLVTTRHKGGSTVDTRLNVAQDLLELLIINLRTLLNTFPEWI 51
>gb|BF267588.2|BF267588 HV_CEa0018F16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018F16f, mRNA sequence
Length = 808
Score = 220 bits (475), Expect(2) = 3e-087
Identities = 89/124 (71%), Positives = 108/124 (87%)
Frame = -3 / +2
Query: 644 EVQGPRPKRVVGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFY 465
EV+ KRVVGDPFR GVEQGPQID EQF KILRY++SGVDSGATLV GGD++G++G+Y
Sbjct: 14 EVKARALKRVVGDPFRKGVEQGPQIDDEQFKKILRYIKSGVDSGATLVTGGDKLGDKGYY 193
Query: 464 IQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAAN 285
IQPT+F+D +D+MKIA+EEIFGPVQ+I KF+ + EVI+RANA YGLAAGVFT +LD AN
Sbjct: 194 IQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANACQYGLAAGVFTNNLDTAN 373
Query: 284 TLSR 273
TL+R
Sbjct: 374 TLTR 385
Score = 163 bits (350), Expect(2) = 7e-054
Identities = 82/124 (66%), Positives = 87/124 (70%)
Frame = +1 / -2
Query: 274 RDRVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANT 453
R +VLA SRL V TPAA+P AFA ITS LNL++ TGPNISS AIF+SS S
Sbjct: 384 RVKVLAVSRLLVKTPAANPYWHAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKI 205
Query: 454 VGCM*KPLSPTLSPPATRVAPLSTPD*TYRKILLNCSPSI*GPCSTPSLKGSPTTRLGRG 633
VG M* PLSP LSPP TRVAPLSTPD RKI LNCS SI*GPCSTP L GSPTTR
Sbjct: 204 VGWM**PLSPNLSPPVTRVAPLSTPDLM*RKIFLNCSSSI*GPCSTPFLNGSPTTRFKAR 25
Query: 634 PWTS 645
TS
Sbjct: 24 ALTS 13
Score = 121 bits (259), Expect(2) = 3e-087
Identities = 44/56 (78%), Positives = 52/56 (92%)
Frame = -3 / +3
Query: 272 ALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAW 105
ALRAGT+WVNC+D+FDA IPFGGYKMSG+GREKGI++L+NYLQ KAV T +KNPAW
Sbjct: 387 ALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIHSLKNYLQVKAVRTALKNPAW 554
Score = 98.7 bits (209), Expect(2) = 2e-033
Identities = 53/127 (41%), Positives = 69/127 (54%)
Frame = +3 / -1
Query: 276 RQGVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHR 455
RQGVGRVQ ++ Q V VR DHL+ ELE+ L+RPEYLL LH +L + ++
Sbjct: 382 RQGVGRVQVVGKNAGGQSVLACVRPLDHLVEVIELED*LNRPEYLLLGYLHVILHI*ENC 203
Query: 456 RLYVEAPFAYPVAAGDEGGTAVDAGLNVPQDLVELLAVDLRPLFDPVPEGVXXXXXXXXX 635
L V V +GG+ VD LNV QDL+ELL ++LR L + PE +
Sbjct: 202 WLDVVTFVTQLVTTRHKGGSTVDTRLNVAQDLLELLIINLRTLLNTFPEWITNYTLQSTS 23
Query: 636 XXFSTNS 656
FS NS
Sbjct: 22 LDFSANS 2
Score = 67.5 bits (141), Expect(2) = 7e-054
Identities = 33/57 (57%), Positives = 35/57 (61%)
Frame = +1 / -1
Query: 103 SHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSA 273
+HAGFL V TA R* R MPFS P PLIL PP G+ AS S QFT VPA A
Sbjct: 556 NHAGFLSAVRTALTCR*FFRLWMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRA 386
Score = 63.4 bits (132), Expect(2) = 2e-033
Identities = 31/56 (55%), Positives = 36/56 (64%)
Frame = +3 / -3
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQ 269
+P VL L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+
Sbjct: 557 EPRRVLKRGTHRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPE 390
>gb|BU972798.1|BU972798 HB22L24r BC Hordeum vulgare subsp. vulgare cDNA clone HB22L24
5-PRIME, mRNA sequence
Length = 629
Score = 314 bits (679), Expect = 4e-085
Identities = 122/163 (74%), Positives = 149/163 (91%)
Frame = -3 / +1
Query: 587 EQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFADAKDEMKIAREE 408
E+GPQID EQF KILRY++SGVDSGATLV GGD++G++G+YIQPT+F+D +D+MKIA+EE
Sbjct: 7 EEGPQIDDEQFKKILRYIKSGVDSGATLVTGGDKLGDKGYYIQPTIFSDVQDDMKIAQEE 186
Query: 407 IFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVWVNCYDVF 228
IFGPVQ+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL+RALRAGT+WVNC+D+F
Sbjct: 187 IFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIF 366
Query: 227 DATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
DA IPFGGYKMSG+GREKGI +L+NYLQ KAVVT +KNPAWL*
Sbjct: 367 DAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 495
Score = 207 bits (446), Expect = 6e-053
Identities = 104/163 (63%), Positives = 113/163 (69%)
Frame = +1 / -1
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 494 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 315
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVG 459
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPNISS AIF+SS S VG
Sbjct: 314 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVG 135
Query: 460 CM*KPLSPTLSPPATRVAPLSTPD*TYRKILLNCSPSI*GPCS 588
M* PLSP LSPP TRVAPLSTPD RKI LNCS SI*GP S
Sbjct: 134 WM**PLSPNLSPPVTRVAPLSTPDLM*RKIFLNCSSSI*GPSS 6
Score = 157 bits (337), Expect = 6e-038
Identities = 83/164 (50%), Positives = 100/164 (60%)
Frame = +3 / -3
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 492 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 313
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRL 461
GVGRVQ E+ Q V VR DHL+ ELE+ L+RPEYLL LH +L + ++ L
Sbjct: 312 GVGRVQVVGENAGGQSVLACVRPLDHLVEVIELED*LNRPEYLLLGYLHVILHI*ENCWL 133
Query: 462 YVEAPFAYPVAAGDEGGTAVDAGLNVPQDLVELLAVDLRPLFDP 593
V V +GG+ VD LNV QDL+ELL ++LR L P
Sbjct: 132 DVVTFVTQLVTTRHKGGSTVDTRLNVAQDLLELLIINLRTLLVP 1
>gb|BM815988.1|BM815988 HC108H09_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC108H09_SK.ab1 similar to aldehyde dehydrogenase [Oryza
sativa], T-cytoplasm male sterility restorer factor 2
[Zea mays],aldehyde dehydrogenase (NAD) (EC 1.2.1.3) 2A
precursor, mitochondrial [Nicotiana tabacum],aldehyde
dehydrogenase ALDH2b [Oryza sativa], mRNA sequence
Length = 896
Score = 304 bits (659), Expect = 2e-082
Identities = 119/159 (74%), Positives = 145/159 (91%)
Frame = -3 / +3
Query: 575 QIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFADAKDEMKIAREEIFGP 396
QID EQF KILRY++SGVDSGATLV GGD++G++G+YIQPT+F+D +D+MKIA+EEIFGP
Sbjct: 33 QIDDEQFKKILRYIKSGVDSGATLVTGGDKLGDKGYYIQPTIFSDVQDDMKIAQEEIFGP 212
Query: 395 VQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVWVNCYDVFDATI 216
VQ+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL+RALRAGT+WVNC+D+FDA I
Sbjct: 213 VQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIFDAAI 392
Query: 215 PFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
PFGGYKMSG+GREKGI +L+NYLQ KAVVT +KNPAWL*
Sbjct: 393 PFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 509
Score = 203 bits (438), Expect = 8e-052
Identities = 102/162 (62%), Positives = 111/162 (68%)
Frame = +1 / -2
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 508 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 329
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVG 459
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPNISS AIF+SS S VG
Sbjct: 328 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVG 149
Query: 460 CM*KPLSPTLSPPATRVAPLSTPD*TYRKILLNCSPSI*GPC 585
M* PLSP LSPP TRVAPLSTPD RKI LNCS SI* C
Sbjct: 148 WM**PLSPNLSPPVTRVAPLSTPDLM*RKIFLNCSSSI*ASC 23
Score = 150 bits (323), Expect = 6e-036
Identities = 79/158 (50%), Positives = 98/158 (62%)
Frame = +3 / -1
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 506 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 327
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRL 461
GVGRVQ ++ Q V VR+ DHL+ ELE+ L+RPEYLL LH +L + ++ L
Sbjct: 326 GVGRVQVVGKNAGGQSVLACVRSLDHLVEVIELED*LNRPEYLLLGYLHVILHI*ENCWL 147
Query: 462 YVEAPFAYPVAAGDEGGTAVDAGLNVPQDLVELLAVDL 575
V V +GG+ VD LNV QDL+ELL ++L
Sbjct: 146 DVVTFVTQLVTTRHKGGSTVDTRLNVAQDLLELLIINL 33
>gb|BI776695.2|BI776695 EBpi07_SQ001_H11_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ001_H11 5', mRNA sequence
Length = 481
Score = 282 bits (611), Expect = 1e-075
Identities = 110/150 (73%), Positives = 136/150 (90%)
Frame = -3 / +2
Query: 548 ILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSG 369
ILRY+ SGV SGATLV GGD++G++G+YIQPT+F+D +D+MKIA+EEIFGPVQ+I KF+
Sbjct: 2 ILRYINSGVYSGATLVTGGDKLGDKGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFND 181
Query: 368 VEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSG 189
+ EVI+RANA+ YGLAAGVFT +LD ANTL+RAL+AGT+WVNC+D+FDA IPFGGYKMSG
Sbjct: 182 LNEVIKRANASQYGLAAGVFTNNLDTANTLTRALKAGTIWVNCFDIFDAAIPFGGYKMSG 361
Query: 188 VGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
+GREKGI +L+NYLQ KAVVT +KNPAWL*
Sbjct: 362 IGREKGIDSLKNYLQVKAVVTALKNPAWL* 451
Score = 180 bits (387), Expect = 8e-045
Identities = 92/150 (61%), Positives = 102/150 (68%)
Frame = +1 / -2
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 450 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 271
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVG 459
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPNISS AIF+SS S VG
Sbjct: 270 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVG 91
Query: 460 CM*KPLSPTLSPPATRVAPLSTPD*TYRKI 549
M* PLSP LSPP TRVAPL TP+ RKI
Sbjct: 90 WM**PLSPNLSPPVTRVAPL*TPELM*RKI 1
Score = 134 bits (287), Expect = 5e-031
Identities = 73/149 (48%), Positives = 88/149 (59%)
Frame = +3 / -1
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A + RQ
Sbjct: 448 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGLEGTRQ 269
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRL 461
GVGRVQ E+ Q V VR DHL+ ELE+ L+RPEYLL LH +L + ++ L
Sbjct: 268 GVGRVQVVGENAGGQSVLACVRPLDHLVEVIELED*LNRPEYLLLGYLHVILHI*ENCWL 89
Query: 462 YVEAPFAYPVAAGDEGGTAVDAGLNVPQD 548
V V +GG+ VD +NV QD
Sbjct: 88 DVVTFVTQLVTTRHKGGSTVDTRVNVAQD 2
>gb|BI949913.1|BI949913 HVSMEl0016O20f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0016O20f, mRNA sequence
Length = 440
Score = 270 bits (584), Expect = 6e-072
Identities = 104/146 (71%), Positives = 132/146 (90%)
Frame = -3 / +3
Query: 572 IDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFADAKDEMKIAREEIFGPV 393
ID EQF KILRY++SGVDSGATLV GGD++G++G+YIQPT+F+D +D+MKIA+EEIFGPV
Sbjct: 3 IDDEQFKKILRYIKSGVDSGATLVTGGDKLGDKGYYIQPTIFSDVQDDMKIAQEEIFGPV 182
Query: 392 QTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVWVNCYDVFDATIP 213
Q+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL+RALRAGT+WVNC+D+F+A IP
Sbjct: 183 QSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDMFNAAIP 362
Query: 212 FGGYKMSGVGREKGIYALRNYLQTKA 135
FGGYKM G+GR+KG ++L+NYLQ KA
Sbjct: 363 FGGYKMIGIGRDKGNHSLKNYLQVKA 440
Score = 176 bits (379), Expect = 1e-043
Identities = 90/146 (61%), Positives = 99/146 (67%)
Frame = +1 / -2
Query: 136 AFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRLRVNT 315
A R* R *+P S P P+IL PP G+ A N S QFT VPA AR +VLA SRL V T
Sbjct: 439 ALTCR*FFRL*LPLSLPMPIILYPPKGIAALNMSKQFTQIVPALRARVKVLAVSRLLVKT 260
Query: 316 PAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVGCM*KPLSPTLSP 495
PAA+P +AFA ITS LNL++ TGPNISS AIF+SS S VG M* PLSP LSP
Sbjct: 259 PAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVGWM**PLSPNLSP 80
Query: 496 PATRVAPLSTPD*TYRKILLNCSPSI 573
P TRVAPLSTPD RKI LNCS SI
Sbjct: 79 PVTRVAPLSTPDLM*RKIFLNCSSSI 2
Score = 135 bits (290), Expect = 2e-031
Identities = 70/145 (48%), Positives = 89/145 (61%)
Frame = +3 / -1
Query: 138 LCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQGVGRVQAPREHP 317
L L+VV + V AL+P DA HLV AE D G+EHV AVHP A P+ RQGVGRVQ ++
Sbjct: 437 LDLQVVLQAVIALIPTDADHLVPAEGDRGIEHVKAVHPDRAGPEGTRQGVGRVQVVGKNA 258
Query: 318 RRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRLYVEAPFAYPVAA 497
Q V VR DHL+ ELE+ L+RPEYLL LH +L + ++ L V V
Sbjct: 257 GGQSVLACVRPLDHLVEVIELED*LNRPEYLLLGYLHVILHI*ENCWLDVVTFVTQLVTT 78
Query: 498 GDEGGTAVDAGLNVPQDLVELLAVD 572
+GG+ VD LNV QDL+ELL ++
Sbjct: 77 RHKGGSTVDTRLNVAQDLLELLIIN 3
>gb|BJ545810.1|BJ545810 BJ545810 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak26h06 3', mRNA sequence
Length = 672
Score = 266 bits (576), Expect = 7e-071
Identities = 103/139 (74%), Positives = 127/139 (91%)
Frame = -3 / -2
Query: 515 GATLVAGGDRVGERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANAT 336
GATLV GGD++G++G+YIQPT+F+D +D+MKIA+EEIFGPVQ+I KF+ + EVI+RANA+
Sbjct: 671 GATLVTGGDKLGDKGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANAS 492
Query: 335 PYGLAAGVFTRSLDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALR 156
YGLAAGVFT +LD ANTL+RALRAGT+WVNC+D+FDA IPFGGYKMSG+GREKGI +L+
Sbjct: 491 QYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLK 312
Query: 155 NYLQTKAVVTPIKNPAWL* 99
NYLQ KAVVT +KNPAWL*
Sbjct: 311 NYLQVKAVVTALKNPAWL* 255
Score = 171 bits (368), Expect = 3e-042
Identities = 86/139 (61%), Positives = 95/139 (68%)
Frame = +1 / +1
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 256 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 435
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVG 459
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPNISS AIF+SS S VG
Sbjct: 436 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVG 615
Query: 460 CM*KPLSPTLSPPATRVAP 516
M* PLSP LSPP TRVAP
Sbjct: 616 WM**PLSPNLSPPVTRVAP 672
Score = 123 bits (264), Expect = 8e-028
Identities = 67/138 (48%), Positives = 82/138 (59%)
Frame = +3 / +3
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 258 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 437
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRL 461
GVGRVQ ++ Q V VR DHL+ ELE+ L+RPEYLL LH +L + ++ L
Sbjct: 438 GVGRVQVVGKNAGGQSVLACVRPLDHLVEVIELED*LNRPEYLLLGYLHVILHI*ENCWL 617
Query: 462 YVEAPFAYPVAAGDEGGT 515
V V +GG+
Sbjct: 618 DVVTFVTQLVTTRHKGGS 671
>gb|AV921807.1|AV921807 AV921807 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12o18 3', mRNA sequence
Length = 657
Score = 264 bits (570), Expect = 5e-070
Identities = 102/138 (73%), Positives = 126/138 (91%)
Frame = -3 / -2
Query: 512 ATLVAGGDRVGERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATP 333
ATLV GGD++G++G+YIQPT+F+D +D+MKIA+EEIFGPVQ+I KF+ + EVI+RANA+
Sbjct: 653 ATLVTGGDKLGDKGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQ 474
Query: 332 YGLAAGVFTRSLDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRN 153
YGLAAGVFT +LD ANTL+RALRAGT+WVNC+D+FDA IPFGGYKMSG+GREKGI +L+N
Sbjct: 473 YGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKN 294
Query: 152 YLQTKAVVTPIKNPAWL* 99
YLQ KAVVT +KNPAWL*
Sbjct: 293 YLQVKAVVTALKNPAWL* 240
Score = 168 bits (361), Expect = 3e-041
Identities = 85/138 (61%), Positives = 94/138 (68%)
Frame = +1 / +1
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 241 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 420
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVG 459
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPNISS AIF+SS S VG
Sbjct: 421 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVG 600
Query: 460 CM*KPLSPTLSPPATRVA 513
M* PLSP LSPP TRVA
Sbjct: 601 WM**PLSPNLSPPVTRVA 654
Score = 125 bits (267), Expect = 3e-028
Identities = 63/114 (55%), Positives = 73/114 (64%)
Frame = +3 / +3
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 243 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 422
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGV 443
GVGRVQ E+ Q V VR DHL+ ELE+ L+RPEYLL LH +L +
Sbjct: 423 GVGRVQVVGENAGGQSVLACVRPLDHLVEVIELED*LNRPEYLLLGYLHVILHI 584
>gb|BJ545985.1|BJ545985 BJ545985 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak30h11 3', mRNA sequence
Length = 624
Score = 253 bits (547), Expect = 7e-067
Identities = 97/132 (73%), Positives = 121/132 (91%)
Frame = -3 / -3
Query: 494 GDRVGERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAG 315
GD++G++G+YIQPT+F+D +D+MKIA+EEIFGPVQ+I KF+ + EVI+RANA+ YGLAAG
Sbjct: 622 GDKLGDKGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAG 443
Query: 314 VFTRSLDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKA 135
VFT +LD ANTL+RALRAGT+WVNC+D+FDA IPFGGYKMSG+GREKGI +L+NYLQ KA
Sbjct: 442 VFTNNLDTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKA 263
Query: 134 VVTPIKNPAWL* 99
VVT +KNPAWL*
Sbjct: 262 VVTALKNPAWL* 227
Score = 156 bits (336), Expect = 9e-038
Identities = 80/132 (60%), Positives = 89/132 (67%)
Frame = +1 / +3
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 228 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 407
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVG 459
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPNISS AIF+SS S VG
Sbjct: 408 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVG 587
Query: 460 CM*KPLSPTLSP 495
M* PLSP LSP
Sbjct: 588 WM**PLSPNLSP 623
Score = 123 bits (263), Expect = 1e-027
Identities = 62/114 (54%), Positives = 73/114 (64%)
Frame = +3 / +2
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 230 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 409
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGV 443
GVGRVQ ++ Q V VR DHL+ ELE+ L+RPEYLL LH +L +
Sbjct: 410 GVGRVQVVGKNAGGQSVLACVRPLDHLVEVIELED*LNRPEYLLLGYLHVILHI 571
>gb|AV917894.1|AV917894 AV917894 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11p17 3', mRNA sequence
Length = 614
Score = 252 bits (545), Expect = 1e-066
Identities = 98/175 (56%), Positives = 127/175 (72%)
Frame = -3 / -2
Query: 623 KRVVGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFA 444
K VVGDPF V QGPQ+D Q+ K+L+Y+ G GATL+ GG ++G+YI+P +F
Sbjct: 592 KSVVGDPFNPNVHQGPQVDKNQYEKVLKYIDVGKSEGATLLTGGKACSDKGYYIEPAIFT 413
Query: 443 DAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALR 264
D KD+M IA+EEIFGPV ++KF +EEVI++AN+T YGLAAGV T+++D NT+SR++R
Sbjct: 412 DVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVR 233
Query: 263 AGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
+G VWVNCY FD PFGG KMSG G++ G AL YL TK VVTP+ N WL*
Sbjct: 232 SGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPWL* 68
Score = 144 bits (308), Expect = 6e-034
Identities = 83/165 (50%), Positives = 88/165 (53%)
Frame = +1 / +3
Query: 124 GVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRL 303
GVTT V R L RA +P S P PLIL PPNG S *Q T T P + RD V S
Sbjct: 93 GVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMF 272
Query: 304 RVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVGCM*KPLSP 483
V TPAA P V FA ITSS LN TGP ISS AI +SSL S G M* PLS
Sbjct: 273 LVTTPAARPYRVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTSVKMAGSM**PLSL 452
Query: 484 TLSPPATRVAPLSTPD*TYRKILLNCSPSI*GPCSTPSLKGSPTT 618
PP +RVAP P Y + S *GP T LKGSPTT
Sbjct: 453 QAFPPVSRVAPSLLPTSMYLRTFSY*FLST*GP*CTFGLKGSPTT 587
Score = 107 bits (228), Expect = 7e-023
Identities = 61/161 (37%), Positives = 84/161 (52%)
Frame = +3 / +2
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP V++ D L ++V+ EG+ A + +AAHL AAER VE VAV+P P RPR
Sbjct: 71 QPGRVVEWSDHRLGVQVLVEGIRAHVLAEAAHLAAAERGVRVEGEVAVNPDDPGPDRPRH 250
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRL 461
V V H Q + VR +HLLH E HRPE L + H +L VG+ L
Sbjct: 251 CVHGVDVLGHHAGGQAIPGAVRLLNHLLHCLEFHESHHRPEDFLLRNRHVILDVGEDGGL 430
Query: 462 YVEAPFAYPVAAGDEGGTAVDAGLNVPQDLVELLAVDLRPL 584
V A + +G+ GG ++V +DL+ L+ V+LR L
Sbjct: 431 DVVTLVAAGLPSGE*GGAFALTDVDVLEDLLVLILVNLRAL 553
>gb|BJ448569.1|BJ448569 BJ448569 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak20g24 5', mRNA sequence
Length = 670
Score = 252 bits (545), Expect = 1e-066
Identities = 98/175 (56%), Positives = 127/175 (72%)
Frame = -3 / +2
Query: 623 KRVVGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFA 444
K VVGDPF V QGPQ+D Q+ K+L+Y+ G GATL+ GG ++G+YI+P +F
Sbjct: 116 KSVVGDPFNPNVHQGPQVDKNQYEKVLKYIDVGKSEGATLLTGGKACSDKGYYIEPAIFT 295
Query: 443 DAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALR 264
D KD+M IA+EEIFGPV ++KF +EEVI++AN+T YGLAAGV T+++D NT+SR++R
Sbjct: 296 DVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVR 475
Query: 263 AGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
+G VWVNCY FD PFGG KMSG G++ G AL YL TK VVTP+ N WL*
Sbjct: 476 SGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPWL* 640
Score = 144 bits (308), Expect = 6e-034
Identities = 83/165 (50%), Positives = 88/165 (53%)
Frame = +1 / -2
Query: 124 GVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRL 303
GVTT V R L RA +P S P PLIL PPNG S *Q T T P + RD V S
Sbjct: 615 GVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMF 436
Query: 304 RVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVGCM*KPLSP 483
V TPAA P V FA ITSS LN TGP ISS AI +SSL S G M* PLS
Sbjct: 435 LVTTPAARPYRVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTSVKMAGSM**PLSL 256
Query: 484 TLSPPATRVAPLSTPD*TYRKILLNCSPSI*GPCSTPSLKGSPTT 618
PP +RVAP P Y + S *GP T LKGSPTT
Sbjct: 255 QAFPPVSRVAPSLLPTSMYLRTFSY*FLST*GP*CTFGLKGSPTT 121
Score = 111 bits (237), Expect = 4e-024
Identities = 62/161 (38%), Positives = 85/161 (52%)
Frame = +3 / -1
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP V++ D L ++V+ EG+ A + +AAHL AAER VE VAV+P P RPR
Sbjct: 637 QPGRVVEWSDHRLGVQVLVEGIRAHVLAEAAHLAAAERGVRVEGEVAVNPDDPGPDRPRH 458
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRL 461
GV V H Q + VR +HLLH E HRPE L + H +L VG+ L
Sbjct: 457 GVHGVDVLGHHAGGQAIPGAVRLLNHLLHCLEFHESHHRPEDFLLRNRHVILDVGEDGGL 278
Query: 462 YVEAPFAYPVAAGDEGGTAVDAGLNVPQDLVELLAVDLRPL 584
V A + +G+ GG ++V +DL+ L+ V+LR L
Sbjct: 277 DVVTLVAAGLPSGE*GGAFALTDVDVLEDLLVLILVNLRTL 155
>gb|BJ456291.1|BJ456291 BJ456291 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak20g24 3', mRNA sequence
Length = 706
Score = 252 bits (545), Expect = 1e-066
Identities = 98/175 (56%), Positives = 127/175 (72%)
Frame = -3 / -3
Query: 623 KRVVGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFA 444
K VVGDPF V QGPQ+D Q+ K+L+Y+ G GATL+ GG ++G+YI+P +F
Sbjct: 590 KSVVGDPFNPNVHQGPQVDKNQYEKVLKYIDVGKSEGATLLTGGKACSDKGYYIEPAIFT 411
Query: 443 DAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALR 264
D KD+M IA+EEIFGPV ++KF +EEVI++AN+T YGLAAGV T+++D NT+SR++R
Sbjct: 410 DVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVR 231
Query: 263 AGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
+G VWVNCY FD PFGG KMSG G++ G AL YL TK VVTP+ N WL*
Sbjct: 230 SGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPWL* 66
Score = 144 bits (308), Expect = 6e-034
Identities = 83/165 (50%), Positives = 88/165 (53%)
Frame = +1 / +1
Query: 124 GVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRL 303
GVTT V R L RA +P S P PLIL PPNG S *Q T T P + RD V S
Sbjct: 91 GVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMF 270
Query: 304 RVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVGCM*KPLSP 483
V TPAA P V FA ITSS LN TGP ISS AI +SSL S G M* PLS
Sbjct: 271 LVTTPAARPYRVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTSVKMAGSM**PLSL 450
Query: 484 TLSPPATRVAPLSTPD*TYRKILLNCSPSI*GPCSTPSLKGSPTT 618
PP +RVAP P Y + S *GP T LKGSPTT
Sbjct: 451 QAFPPVSRVAPSLLPTSMYLRTFSY*FLST*GP*CTFGLKGSPTT 585
Score = 111 bits (237), Expect = 4e-024
Identities = 62/161 (38%), Positives = 85/161 (52%)
Frame = +3 / +3
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP V++ D L ++V+ EG+ A + +AAHL AAER VE VAV+P P RPR
Sbjct: 69 QPGRVVEWSDHRLGVQVLVEGIRAHVLAEAAHLAAAERGVRVEGEVAVNPDDPGPDRPRH 248
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRL 461
GV V H Q + VR +HLLH E HRPE L + H +L VG+ L
Sbjct: 249 GVHGVDVLGHHAGGQAIPGAVRLLNHLLHCLEFHESHHRPEDFLLRNRHVILDVGEDGGL 428
Query: 462 YVEAPFAYPVAAGDEGGTAVDAGLNVPQDLVELLAVDLRPL 584
V A + +G+ GG ++V +DL+ L+ V+LR L
Sbjct: 429 DVVTLVAAGLPSGE*GGAFALTDVDVLEDLLVLILVNLRTL 551
>gb|BJ548158.1|BJ548158 BJ548158 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13d19 3', mRNA sequence
Length = 620
Score = 248 bits (535), Expect = 3e-065
Identities = 95/130 (73%), Positives = 119/130 (91%)
Frame = -3 / -2
Query: 488 RVGERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVF 309
++G++G+YIQPT+F+D +D+MKIA+EEIFGPVQ+I KF+ + EVI+RANA+ YGLAAGVF
Sbjct: 619 KLGDKGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVF 440
Query: 308 TRSLDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVV 129
T +LD ANTL+RALRAGT+WVNC+D+FDA IPFGGYKMSG+GREKGI +L+NYLQ KAVV
Sbjct: 439 TNNLDTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVV 260
Query: 128 TPIKNPAWL* 99
T +KNPAWL*
Sbjct: 259 TALKNPAWL* 230
Score = 151 bits (325), Expect = 3e-036
Identities = 78/130 (60%), Positives = 87/130 (66%)
Frame = +1 / +3
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 231 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 410
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVG 459
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPNISS AIF+SS S VG
Sbjct: 411 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVG 590
Query: 460 CM*KPLSPTL 489
M* PLSP L
Sbjct: 591 WM**PLSPNL 620
Score = 125 bits (267), Expect = 3e-028
Identities = 63/114 (55%), Positives = 73/114 (64%)
Frame = +3 / +2
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 233 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 412
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGV 443
GVGRVQ E+ Q V VR DHL+ ELE+ L+RPEYLL LH +L +
Sbjct: 413 GVGRVQVVGENAGGQSVLACVRPLDHLVEVIELED*LNRPEYLLLGYLHVILHI 574
>gb|AW983019.2|AW983019 HVSMEg0004N09f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0004N09f, mRNA sequence
Length = 614
Score = 245 bits (529), Expect = 2e-064
Identities = 94/131 (71%), Positives = 117/131 (89%)
Frame = -3 / +1
Query: 491 DRVGERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGV 312
D++G++G+YIQPT+F+D +D+MKIA EEIFGPVQ+I KF+ + EVI+ ANA+ YGLAAGV
Sbjct: 1 DKLGDKGYYIQPTIFSDVQDDMKIAHEEIFGPVQSIFKFNDLNEVIKMANASQYGLAAGV 180
Query: 311 FTRSLDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAV 132
FT +LD ANTL+RAL+AGT+WVNC+D+FDA IPFGGYKMSG+GREKGI +L NYLQ KAV
Sbjct: 181 FTNNLDTANTLTRALKAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLNNYLQVKAV 360
Query: 131 VTPIKNPAWL* 99
VT +KNPAWL*
Sbjct: 361 VTALKNPAWL* 393
Score = 153 bits (328), Expect = 1e-036
Identities = 79/130 (60%), Positives = 88/130 (67%)
Frame = +1 / -1
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R*L R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 392 HNHAGFLSAVTTALTCR*LFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 213
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVG 459
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPNISS AIF+SS S VG
Sbjct: 212 KVLAVSRLLVKTPAANPYWLAFAILITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVG 33
Query: 460 CM*KPLSPTL 489
M* PLSP L
Sbjct: 32 WM**PLSPNL 3
Score = 115 bits (246), Expect = 2e-025
Identities = 63/135 (46%), Positives = 76/135 (56%)
Frame = +3 / -3
Query: 39 IRHVLREPAQRRADKDGGCDLQPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERD 218
+R R P + G QP VL DD L L+VV + VDA LP DAAHLV AE D
Sbjct: 453 VRASSRCPVSQTQKTIGVLCSQPRRVLKRGDDRLDLQVVIQAVDAFLPTDAAHLVPAEGD 274
Query: 219 GGVEHVVAVHPHGARPQRPRQGVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHR 398
G+E V AVHP + RQGVGRVQ ++ Q V VR DHL+ ELE+ L+R
Sbjct: 273 RGIEDVKAVHPDRTGLEGTRQGVGRVQVVGKNAGGQSVLACVRHLDHLVEVIELED*LNR 94
Query: 399 PEYLLPSDLHFVLGV 443
PEYLL LH +L +
Sbjct: 93 PEYLLMGYLHVILHI 49
>gb|AV929175.1|AV929175 AV929175 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd11e16 3', mRNA sequence
Length = 636
Score = 244 bits (527), Expect = 4e-064
Identities = 94/170 (55%), Positives = 123/170 (72%)
Frame = -3 / -3
Query: 608 DPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFADAKDE 429
DPF V QGPQ+D Q+ K+L+Y+ G GATL+ GG ++G+YI+P +F D KD+
Sbjct: 634 DPFNPNVHQGPQVDKNQYEKVLKYIDVGKSEGATLLTGGKACSDKGYYIEPAIFTDVKDD 455
Query: 428 MKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVW 249
M IA+EEIFGPV ++KF +EEVI++AN+T YGLAAGV T+++D NT+SR++R+G VW
Sbjct: 454 MSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVW 275
Query: 248 VNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
VNCY FD PFGG KMSG G++ G AL YL TK VVTP+ N WL*
Sbjct: 274 VNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPWL* 125
Score = 136 bits (291), Expect = 1e-031
Identities = 80/162 (49%), Positives = 85/162 (52%)
Frame = +1 / +3
Query: 124 GVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRL 303
GVTT V R L RA +P S P PLIL PPNG S *Q T T P + RD V S
Sbjct: 150 GVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMF 329
Query: 304 RVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVGCM*KPLSP 483
V TPAA P V FA ITSS LN TGP ISS AI +SSL S G M* PLS
Sbjct: 330 LVTTPAARPYRVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTSVKMAGSM**PLSL 509
Query: 484 TLSPPATRVAPLSTPD*TYRKILLNCSPSI*GPCSTPSLKGS 609
PP +RVAP P Y + S *GP T LKGS
Sbjct: 510 QAFPPVSRVAPSLLPTSMYLRTFSY*FLST*GP*CTFGLKGS 635
Score = 107 bits (228), Expect = 7e-023
Identities = 61/161 (37%), Positives = 84/161 (52%)
Frame = +3 / +2
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP V++ D L ++V+ EG+ A + +AAHL AAER VE VAV+P P RPR
Sbjct: 128 QPGRVVEWSDHRLGVQVLVEGIRAHVLAEAAHLAAAERGVRVEGEVAVNPDDPGPDRPRH 307
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRL 461
V V H Q + VR +HLLH E HRPE L + H +L VG+ L
Sbjct: 308 CVHGVDVLGHHAGGQAIPGAVRLLNHLLHCLEFHESHHRPEDFLLRNRHVILDVGEDGGL 487
Query: 462 YVEAPFAYPVAAGDEGGTAVDAGLNVPQDLVELLAVDLRPL 584
V A + +G+ GG ++V +DL+ L+ V+LR L
Sbjct: 488 DVVTLVAAGLPSGE*GGAFALTDVDVLEDLLVLILVNLRAL 610
>gb|CA000617.1|CA000617 HS07N10u HS Hordeum vulgare subsp. vulgare cDNA clone HS07N10
3-PRIME, mRNA sequence
Length = 574
Score = 244 bits (527), Expect = 4e-064
Identities = 94/170 (55%), Positives = 123/170 (72%)
Frame = -3 / -1
Query: 608 DPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFADAKDE 429
DPF V QGPQ+D Q+ K+L+Y+ G GATL+ GG ++G+YI+P +F D KD+
Sbjct: 574 DPFNPNVHQGPQVDKNQYEKVLKYIDVGKSEGATLLTGGKACSDKGYYIEPAIFTDVKDD 395
Query: 428 MKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVW 249
M IA+EEIFGPV ++KF +EEVI++AN+T YGLAAGV T+++D NT+SR++R+G VW
Sbjct: 394 MSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVW 215
Query: 248 VNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
VNCY FD PFGG KMSG G++ G AL YL TK VVTP+ N WL*
Sbjct: 214 VNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPWL* 65
Score = 136 bits (292), Expect = 1e-031
Identities = 80/161 (49%), Positives = 85/161 (52%)
Frame = +1 / +3
Query: 124 GVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRL 303
GVTT V R L RA +P S P PLIL PPNG S *Q T T P + RD V S
Sbjct: 90 GVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMF 269
Query: 304 RVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVGCM*KPLSP 483
V TPAA P* V FA ITSS LN TGP ISS AI +SSL S G M* PLS
Sbjct: 270 LVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTSVKMAGSM**PLSL 449
Query: 484 TLSPPATRVAPLSTPD*TYRKILLNCSPSI*GPCSTPSLKG 606
PP +RVAP P Y + S *GP T LKG
Sbjct: 450 QAFPPVSRVAPSLLPTSMYLRTFSY*FLST*GP*CTFGLKG 572
Score = 112 bits (239), Expect = 2e-024
Identities = 62/161 (38%), Positives = 85/161 (52%)
Frame = +3 / +2
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP V++ D L ++V+ EG+ A + +AAHL AAER VE VAV+P P RPR
Sbjct: 68 QPGRVVEWSDHRLGVQVLVEGIRAHVLAEAAHLAAAERGVRVEGEVAVNPDDPGPDRPRH 247
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRL 461
GV V H Q + VR +HLLH E HRPE L + H +L VG+ L
Sbjct: 248 GVHGVDVLGHHAGGQAIAGAVRLLNHLLHCLEFHESHHRPEDFLLRNRHVILDVGEDGGL 427
Query: 462 YVEAPFAYPVAAGDEGGTAVDAGLNVPQDLVELLAVDLRPL 584
V A + +G+ GG ++V +DL+ L+ V+LR L
Sbjct: 428 DVVTLVAAGLPSGE*GGAFALTDVDVLEDLLVLILVNLRTL 550
>gb|BJ548794.1|BJ548794 BJ548794 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal35m14 3', mRNA sequence
Length = 581
Score = 230 bits (497), Expect = 6e-060
Identities = 90/120 (75%), Positives = 109/120 (90%)
Frame = -3 / -2
Query: 458 PTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTL 279
PT+F+D +D+MKIA+EEIFGPVQ+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL
Sbjct: 580 PTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTL 401
Query: 278 SRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
+RALRAGT+WVNC+D+FDA IPFGGYKMSG+GREKGI +L+NYLQ KAVVT +KNPAWL*
Sbjct: 400 TRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 221
Score = 139 bits (299), Expect = 1e-032
Identities = 71/120 (59%), Positives = 80/120 (66%)
Frame = +1 / +3
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 222 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 401
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVG 459
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPNISS AIF+SS S VG
Sbjct: 402 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVG 581
Score = 125 bits (267), Expect = 3e-028
Identities = 63/114 (55%), Positives = 73/114 (64%)
Frame = +3 / +2
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 224 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 403
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGV 443
GVGRVQ E+ Q V VR DHL+ ELE+ L+RPEYLL LH +L +
Sbjct: 404 GVGRVQVVGENAGGQSVLACVRPLDHLVEVIELED*LNRPEYLLLGYLHVILHI 565
>gb|BU984313.1|BU984313 HF03J09r HF Hordeum vulgare subsp. vulgare cDNA clone HF03J09
5-PRIME, mRNA sequence
Length = 526
Score = 229 bits (495), Expect = 1e-059
Identities = 88/159 (55%), Positives = 116/159 (72%)
Frame = -3 / +3
Query: 623 KRVVGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFA 444
K VVGDPF V QGPQ+D Q+ K+L+Y+ G GATL+ GG ++G+YI+P +F
Sbjct: 45 KSVVGDPFNPNVHQGPQVDKNQYEKVLKYIDVGKSEGATLLTGGKACSDKGYYIEPAIFT 224
Query: 443 DAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALR 264
D KD+M IA+EEIFGPV ++KF +EEVI++AN+T YGLAAGV T+++D NT+SR++R
Sbjct: 225 DVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVR 404
Query: 263 AGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYL 147
+G VWVNCY FD PFGG KMSG G++ G AL YL
Sbjct: 405 SGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYL 521
Score = 137 bits (293), Expect = 8e-032
Identities = 80/159 (50%), Positives = 85/159 (53%)
Frame = +1 / -1
Query: 142 VWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRLRVNTPA 321
V R L RA +P S P PLIL PPNG S *Q T T P + RD V S V TPA
Sbjct: 526 VCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMFLVTTPA 347
Query: 322 ASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVGCM*KPLSPTLSPPA 501
A P* V FA ITSS LN TGP ISS AI +SSL S G M* PLS PP
Sbjct: 346 ARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTSVKMAGSM**PLSLQAFPPV 167
Query: 502 TRVAPLSTPD*TYRKILLNCSPSI*GPCSTPSLKGSPTT 618
+RVAP P Y + S *GP T LKGSPTT
Sbjct: 166 SRVAPSLLPTSMYLRTFSY*FLST*GP*CTFGLKGSPTT 50
Score = 105 bits (224), Expect = 3e-022
Identities = 57/147 (38%), Positives = 78/147 (53%)
Frame = +3 / -3
Query: 144 LEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQGVGRVQAPREHPRR 323
++V+ EG+ A + +AAHL AAER VE VAV+P P RPR GV V H
Sbjct: 524 VQVLVEGIRAHVLAEAAHLAAAERGVRVEGEVAVNPDDPGPDRPRHGVHGVDVLGHHAGG 345
Query: 324 QPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRLYVEAPFAYPVAAGD 503
Q + VR +HLLH E HRPE L + H +L VG+ L V A + +G+
Sbjct: 344 QAIAGAVRLLNHLLHCLEFHESHHRPEDFLLRNRHVILDVGEDGGLDVVTLVAAGLPSGE 165
Query: 504 EGGTAVDAGLNVPQDLVELLAVDLRPL 584
GG ++V +DL+ L+ V+LR L
Sbjct: 164 *GGAFALTDVDVLEDLLVLILVNLRTL 84
>gb|AV931272.1|AV931272 AV931272 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19d07 3', mRNA sequence
Length = 556
Score = 221 bits (476), Expect = 4e-057
Identities = 87/116 (75%), Positives = 105/116 (90%)
Frame = -3 / -2
Query: 446 ADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRAL 267
+D +D+MKIA+EEIFGPVQ+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL+RAL
Sbjct: 555 SDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRAL 376
Query: 266 RAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
RAGT+WVNC+D+FDA IPFGGYKMSG+GREKGI +L+NYLQ KAVVT +KNPAWL*
Sbjct: 375 RAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 208
Score = 136 bits (291), Expect = 1e-031
Identities = 69/115 (60%), Positives = 78/115 (67%)
Frame = +1 / +2
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 209 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 388
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLAS 444
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPNISS AIF+SS S
Sbjct: 389 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTS 553
Score = 125 bits (267), Expect = 3e-028
Identities = 63/114 (55%), Positives = 73/114 (64%)
Frame = +3 / +1
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 211 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 390
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGV 443
GVGRVQ E+ Q V VR DHL+ ELE+ L+RPEYLL LH +L +
Sbjct: 391 GVGRVQVVGENAGGQSVLACVRPLDHLVEVIELED*LNRPEYLLLGYLHVILHI 552
>gb|BU981973.1|BU981973 HA25C12r HA Hordeum vulgare subsp. vulgare cDNA clone HA25C12
5-PRIME, mRNA sequence
Length = 572
Score = 214 bits (462), Expect = 4e-055
Identities = 83/151 (54%), Positives = 110/151 (72%)
Frame = -3 / +1
Query: 551 KILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFS 372
K+L+Y+ G GATL+ GG ++G+Y +P +F D KD+M IA+EEIFGPV ++KF
Sbjct: 16 KVLKYIDVGKSEGATLLTGGKACSDKGYYXEPAIFTDVKDDMSIAQEEIFGPVMALMKFK 195
Query: 371 GVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMS 192
+EEVI++AN+T YGLAAGV T+++D NT+SR++R+G VWVNCY FD PFGG KMS
Sbjct: 196 TMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMS 375
Query: 191 GVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
G G++ G AL YL TK VVTP+ N WL*
Sbjct: 376 GFGKDMGTDALDKYLHTKTVVTPLYNTPWL* 468
Score = 127 bits (272), Expect = 6e-029
Identities = 71/139 (51%), Positives = 75/139 (53%)
Frame = +1 / -1
Query: 124 GVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRL 303
GVTT V R L RA +P S P PLIL PPNG S *Q T T P + RD V S
Sbjct: 443 GVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMF 264
Query: 304 RVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVGCM*KPLSP 483
V TPAA P* V FA ITSS LN TGP ISS AI +SSL S G * PLS
Sbjct: 263 LVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTSVKMAGSX**PLSL 84
Query: 484 TLSPPATRVAPLSTPD*TY 540
PP +RVAP P Y
Sbjct: 83 QAFPPVSRVAPSLLPTSMY 27
Score = 105 bits (224), Expect = 3e-022
Identities = 58/154 (37%), Positives = 80/154 (51%)
Frame = +3 / -3
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP V++ D L ++V+ EG+ A + +AAHL AAER VE VAV+P P RPR
Sbjct: 465 QPGRVVEWSDHRLGVQVLVEGIRAHVLAEAAHLAAAERGVRVEGEVAVNPDDPGPDRPRH 286
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRL 461
GV V H Q + VR +HLLH E HRPE L + H +L VG+ L
Sbjct: 285 GVHGVDVLGHHAGGQAIAGAVRLLNHLLHCLEFHESHHRPEDFLLRNRHVILDVGEDGGL 106
Query: 462 YVEAPFAYPVAAGDEGGTAVDAGLNVPQDLVELL 563
V A + +G+ GG ++V +DL+ L+
Sbjct: 105 XVVTLVAAGLPSGE*GGAFALTDVDVLEDLLVLV 4
>gb|BJ545493.1|BJ545493 BJ545493 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak17a20 3', mRNA sequence
Length = 586
Score = 213 bits (460), Expect = 7e-055
Identities = 85/110 (77%), Positives = 100/110 (90%)
Frame = -3 / -3
Query: 428 MKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVW 249
MKIA+EEIFGPVQ+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL+RALRAGT+W
Sbjct: 584 MKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIW 405
Query: 248 VNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
VNC+D+FDA IPFGGYKMSG+GREKGI +L+NYLQ KAVVT +KNPAWL*
Sbjct: 404 VNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 255
Score = 131 bits (280), Expect = 5e-030
Identities = 66/110 (60%), Positives = 75/110 (68%)
Frame = +1 / +1
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 256 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 435
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFI 429
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPNISS AIF+
Sbjct: 436 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFM 585
Score = 120 bits (256), Expect = 1e-026
Identities = 61/109 (55%), Positives = 70/109 (64%)
Frame = +3 / +3
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 258 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 437
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLH 428
GVGRVQ ++ Q V VR DHL+ ELE+ L+RPEYLL LH
Sbjct: 438 GVGRVQVVGKNAGGQSVLACVRPLDHLVEVIELED*LNRPEYLLLGYLH 584
>gb|BF266942.2|BF266942 HV_CEa0016I01f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0016I01f, mRNA sequence
Length = 837
Score = 199 bits (428), Expect(2) = 4e-054
Identities = 79/118 (66%), Positives = 99/118 (83%)
Frame = -3 / +3
Query: 623 KRVVGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFA 444
KRVVGDPFR GVEQGPQID EQF KILRY++SGVDSGATLV GGD++G++G+YIQPT+F+
Sbjct: 267 KRVVGDPFRKGVEQGPQIDDEQFKKILRYIKSGVDSGATLVTGGDKLGDKGYYIQPTIFS 446
Query: 443 DAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRA 270
D +D+MKIA+EEIFGPVQ I KF+ + EVI+R+NA+ YGL V + LD +T +RA
Sbjct: 447 DVQDDMKIAQEEIFGPVQAIFKFNDLNEVIKRSNASHYGLGVLVLSTHLDTGHTFTRA 620
Score = 148 bits (317), Expect = 4e-035
Identities = 75/120 (62%), Positives = 81/120 (67%)
Frame = +1 / -3
Query: 262 ARSARDRVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLA 441
A AR +V SR T +P* +AF ITS LNL++ TGPNISS AIF+SS
Sbjct: 628 AGGARVKV*PVSRWVDKTSTPNP*WLAFDLLITSLRSLNLKIA*TGPNISSWAIFMSSCT 449
Query: 442 SANTVGCM*KPLSPTLSPPATRVAPLSTPD*TYRKILLNCSPSI*GPCSTPSLKGSPTTR 621
S VG M* PLSP LSPP TRVAPLSTPD RKI LNCS SI*GPCSTP L GSPTTR
Sbjct: 448 SEKIVGWM**PLSPNLSPPVTRVAPLSTPDLM*RKIFLNCSSSI*GPCSTPFLNGSPTTR 269
Score = 32.7 bits (65), Expect(2) = 4e-054
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +3
Query: 679 FVHERVYDEFVE 644
FVHERVYDEFVE
Sbjct: 210 FVHERVYDEFVE 245
>gb|CA015545.1|CA015545 HT14K09r HT Hordeum vulgare subsp. vulgare cDNA clone HT14K09
5-PRIME, mRNA sequence
Length = 584
Score = 210 bits (453), Expect = 6e-054
Identities = 82/147 (55%), Positives = 107/147 (72%)
Frame = -3 / +3
Query: 539 YVQSGVDSGATLVAGGDRVGERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEE 360
Y+ G GATL+ GG ++G+YI+P +F D KD+M IA+EEIFGPV ++KF +EE
Sbjct: 12 YIDVGKSEGATLLTGGKACSDKGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEE 191
Query: 359 VIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGR 180
VI++AN+T YGLAAGV T+++D NT+SR++R+G VWVNCY FD PFGG KMSG G+
Sbjct: 192 VIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGK 371
Query: 179 EKGIYALRNYLQTKAVVTPIKNPAWL* 99
+ G AL YL TK VVTP+ N WL*
Sbjct: 372 DMGTDALDKYLHTKTVVTPLYNTPWL* 452
Score = 130 bits (278), Expect = 9e-030
Identities = 72/139 (51%), Positives = 76/139 (54%)
Frame = +1 / -2
Query: 124 GVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRL 303
GVTT V R L RA +P S P PLIL PPNG S *Q T T P + RD V S
Sbjct: 427 GVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMF 248
Query: 304 RVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVGCM*KPLSP 483
V TPAA P* V FA ITSS LN TGP ISS AI +SSL S G M* PLS
Sbjct: 247 LVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTSVKMAGSM**PLSL 68
Query: 484 TLSPPATRVAPLSTPD*TY 540
PP +RVAP P Y
Sbjct: 67 QAFPPVSRVAPSLLPTSMY 11
Score = 101 bits (216), Expect = 3e-021
Identities = 56/147 (38%), Positives = 75/147 (51%)
Frame = +3 / -1
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP V++ D L ++V+ EG+ A + +AAHL AAER VE VAV+P P RPR
Sbjct: 449 QPGRVVEWSDHRLGVQVLVEGIRAHVLAEAAHLAAAERGVRVEGEVAVNPDDPGPDRPRH 270
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLLPSDLHFVLGVGKHRRL 461
GV V H Q + VR +HLLH E HRPE L + H +L VG+ L
Sbjct: 269 GVHGVDVLGHHAGGQAIAGAVRLLNHLLHCLEFHESHHRPEDFLLRNRHVILDVGEDGGL 90
Query: 462 YVEAPFAYPVAAGDEGGTAVDAGLNVP 542
V A + +G+ GG ++VP
Sbjct: 89 DVVTLVAAGLPSGE*GGAFALTDVDVP 9
>gb|BF260792.2|BF260792 HVSMEf0022P08f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022P08f, mRNA sequence
Length = 727
Score = 201 bits (433), Expect(2) = 2e-052
Identities = 76/142 (53%), Positives = 103/142 (72%)
Frame = -3 / +3
Query: 614 VGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFADAK 435
VGDPF GPQ+D EQF ++LRY++ G GATL+ GG G++G+YI+PT+FAD K
Sbjct: 246 VGDPFDVATNMGPQVDKEQFERVLRYIEHGKSEGATLLTGGKPAGDKGYYIEPTIFADVK 425
Query: 434 DEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGT 255
++MKIA++EIFGPV +++KF V+E I AN T YGLA G+ T++LD AN +SR++ AGT
Sbjct: 426 EDMKIAQDEIFGPVMSLMKFKTVDEAIDNANCTKYGLAGGIITKNLDIANKVSRSVSAGT 605
Query: 254 VWVNCYDVFDATIPFGGYKMSG 189
VWVNCY F+ P GG + G
Sbjct: 606 VWVNCYLAFNPEAPCGGTRRPG 671
Score = 135 bits (289), Expect(2) = 2e-032
Identities = 73/142 (51%), Positives = 80/142 (56%)
Frame = +1 / -1
Query: 190 PLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRLRVNTPAASP*GVAFARRITSST 369
P +L PP G *QFTHTVPA + D +LA S+ V P ASP V A I SST
Sbjct: 670 PGLLVPPQGASGLKAK*QFTHTVPALTDLDTLLAMSKFLVMIPPASPYLVQLALSIASST 491
Query: 370 PLNLRMVCTGPNISSRAIFISSLASANTVGCM*KPLSPTLSPPATRVAPLSTPD*TYRKI 549
LN TGP ISS AIF+SSL SAN VG M* PLSP PP RVAP P Y +
Sbjct: 490 VLNFMRDITGPKISS*AIFMSSLTSANMVGSM*YPLSPAGLPPVRRVAPSLLPCSMYLRT 311
Query: 550 LLNCSPSI*GPCSTPSLKGSPT 615
L NCS S GP + GSPT
Sbjct: 310 LSNCSLSTWGPMLVATSNGSPT 245
Score = 24.4 bits (47), Expect(2) = 2e-052
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -3 / +2
Query: 206 GYKMSGVGREKGIYA 162
GYK +G GR++G+ A
Sbjct: 653 GYKKTGFGRDQGMMA 697
Score = 23.5 bits (45), Expect(2) = 2e-032
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1 / -2
Query: 154 LRRA*MPFSRPTPLIL*P 207
L A MP+SRP P+ L P
Sbjct: 705 LSLAIMPWSRPNPVFLYP 652
>gb|BE194107.2|BE194107 HVSMEh0084A24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0084A24f, mRNA sequence
Length = 628
Score = 196 bits (422), Expect = 1e-049
Identities = 76/100 (76%), Positives = 90/100 (90%)
Frame = -3 / +2
Query: 404 FGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVWVNCYDVFD 225
FGPVQ+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL+RALRAGT+WVNC+D+FD
Sbjct: 2 FGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIFD 181
Query: 224 ATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAW 105
A IPFGGYKMSG+GREKGI +L+NYLQ KAVVT +KNPAW
Sbjct: 182 AAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAW 301
Score = 119 bits (255), Expect = 1e-026
Identities = 60/102 (58%), Positives = 67/102 (65%)
Frame = +1 / -2
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
+ HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 306 HXHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 127
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPN 405
+VLA SRL V TPAA+P +AFA ITS LNL++ TGPN
Sbjct: 126 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TGPN 1
Score = 108 bits (230), Expect = 4e-023
Identities = 55/100 (55%), Positives = 64/100 (64%)
Frame = +3 / -1
Query: 105 PCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQG 284
P VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQG
Sbjct: 301 PRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQG 122
Query: 285 VGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRPE 404
VGRVQ ++ Q V VR DHL+ ELE+ L+RPE
Sbjct: 121 VGRVQVVGKNAGGQSVLACVRPLDHLVEVIELED*LNRPE 2
>gb|AV913129.1|AV913129 AV913129 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11p17 5', mRNA sequence
Length = 552
Score = 196 bits (422), Expect = 1e-049
Identities = 73/132 (55%), Positives = 99/132 (75%)
Frame = -3 / +3
Query: 623 KRVVGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFA 444
K VVGDPF V QGPQ+D Q+ K+L+Y+ G GATL+ GG ++G+YI+P +F
Sbjct: 156 KSVVGDPFNPNVHQGPQVDKNQYEKVLKYIDVGKSEGATLLTGGKACSDKGYYIEPAIFT 335
Query: 443 DAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALR 264
D KD+M IA+EEIFGPV ++KF +EEVI++AN+T YGLAAGV T+++D NT+SR++R
Sbjct: 336 DVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVR 515
Query: 263 AGTVWVNCYDVF 228
+G VWVNCY F
Sbjct: 516 SGVVWVNCYFAF 551
Score = 103 bits (219), Expect = 1e-021
Identities = 62/127 (48%), Positives = 66/127 (51%)
Frame = +1 / -3
Query: 238 *QFTHTVPARSARDRVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSR 417
*Q T T P + RD V S V TPAA P V FA ITSS LN TGP ISS
Sbjct: 541 *QLTQTTPDLTDRDTVFMVSMFLVTTPAARPYRVLFAF*ITSSIVLNFMRAITGPKISSC 362
Query: 418 AIFISSLASANTVGCM*KPLSPTLSPPATRVAPLSTPD*TYRKILLNCSPSI*GPCSTPS 597
AI +SSL S G M* PLS PP +RVAP P Y + S *GP T
Sbjct: 361 AIDMSSLTSVKMAGSM**PLSLQAFPPVSRVAPSLLPTSMYLRTFSY*FLST*GP*CTFG 182
Query: 598 LKGSPTT 618
LKGSPTT
Sbjct: 181 LKGSPTT 161
>gb|CA021407.1|CA021407 HZ40A05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ40A05
5-PRIME, mRNA sequence
Length = 530
Score = 196 bits (422), Expect = 1e-049
Identities = 78/138 (56%), Positives = 102/138 (73%)
Frame = -3 / -3
Query: 512 ATLVAGGDRVGERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATP 333
ATL+ GG ++G+YI+P +F D KD+M IA+EEIFGPV ++KF +EEVI++AN+T
Sbjct: 528 ATLLTGGKACSDKGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTR 349
Query: 332 YGLAAGVFTRSLDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRN 153
YGLAAGV T+++D NT+SR++R+G VWVN Y FD PFGG KMSG G++ G AL
Sbjct: 348 YGLAAGVVTKNIDTMNTVSRSVRSGVVWVN*YFAFDPDAPFGGCKMSGFGKDMGTDALDK 169
Query: 152 YLQTKAVVTPIKNPAWL* 99
YL TK VVTP+ N WL*
Sbjct: 168 YLHTKTVVTPLYNTPWL* 115
Score = 123 bits (263), Expect = 1e-027
Identities = 68/130 (52%), Positives = 72/130 (55%)
Frame = +1 / +2
Query: 124 GVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRL 303
GVTT V R L RA +P S P PLIL PPNG S Q T T P + RD V S
Sbjct: 140 GVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAKYQLTQTTPDLTDRDTVFMVSMF 319
Query: 304 RVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVGCM*KPLSP 483
V TPAA P* V FA ITSS LN TGP ISS AI +SSL S G M* PLS
Sbjct: 320 LVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTSVKMAGSM**PLSL 499
Query: 484 TLSPPATRVA 513
PP +RVA
Sbjct: 500 QAFPPVSRVA 529
>gb|BQ656750.1|BQ656750 HA02F05u HA Hordeum vulgare subsp. vulgare cDNA clone HA02F05
3-PRIME, mRNA sequence
Length = 549
Score = 195 bits (421), Expect = 2e-049
Identities = 77/101 (76%), Positives = 91/101 (90%)
Frame = -3 / -1
Query: 401 GPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVWVNCYDVFDA 222
GPVQ+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL+RALRAGT+WVNC+D+FDA
Sbjct: 549 GPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIFDA 370
Query: 221 TIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
IPFGGYKMSG+GREKGI +L+NYLQ KAVVT +KNPAWL*
Sbjct: 369 AIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 247
Score = 114 bits (243), Expect = 6e-025
Identities = 58/100 (58%), Positives = 66/100 (66%)
Frame = +1 / +2
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 248 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 427
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTG 399
+VLA SRL V TPAA+P +AFA ITS LNL++ TG
Sbjct: 428 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TG 547
Score = 110 bits (234), Expect = 1e-023
Identities = 56/100 (56%), Positives = 64/100 (64%)
Frame = +3 / +1
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 250 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 429
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRP 401
GVGRVQ E+ Q V VR DHL+ ELE+ L+RP
Sbjct: 430 GVGRVQVVGENAGGQSVLACVRPLDHLVEVIELED*LNRP 549
>gb|CA009784.1|CA009784 HT12M08u HT Hordeum vulgare subsp. vulgare cDNA clone HT12M08
3-PRIME, mRNA sequence
Length = 532
Score = 195 bits (421), Expect = 2e-049
Identities = 76/133 (57%), Positives = 99/133 (74%)
Frame = -3 / -2
Query: 497 GGDRVGERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAA 318
GG ++G+YI+P +F D KD+M IA+EEIFGPV ++KF +EEVI++AN+T YGLAA
Sbjct: 531 GGKACSDKGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAA 352
Query: 317 GVFTRSLDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTK 138
GV T+++D NT+SR++R+G VWVNCY FD PFGG KMSG G++ G AL YL TK
Sbjct: 351 GVVTKNIDTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTK 172
Query: 137 AVVTPIKNPAWL* 99
VVTP+ N WL*
Sbjct: 171 TVVTPLYNTPWL* 133
Score = 119 bits (254), Expect = 2e-026
Identities = 66/125 (52%), Positives = 69/125 (55%)
Frame = +1 / +2
Query: 124 GVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRL 303
GVTT V R L RA +P S P PLIL PPNG S *Q T T P + RD V S
Sbjct: 158 GVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMF 337
Query: 304 RVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVGCM*KPLSP 483
V TPAA P* V FA ITSS LN TGP ISS AI +SSL S G M* PLS
Sbjct: 338 LVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTSVKMAGSM**PLSL 517
Query: 484 TLSPP 498
PP
Sbjct: 518 QAFPP 532
>gb|CA027624.1|CA027624 HZ59I04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59I04
5-PRIME, mRNA sequence
Length = 374
Score = 195 bits (421), Expect = 2e-049
Identities = 77/101 (76%), Positives = 91/101 (90%)
Frame = -3 / -1
Query: 401 GPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVWVNCYDVFDA 222
GPVQ+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL+RALRAGT+WVNC+D+FDA
Sbjct: 374 GPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIFDA 195
Query: 221 TIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
IPFGGYKMSG+GREKGI +L+NYLQ KAVVT +KNPAWL*
Sbjct: 194 AIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 72
Score = 114 bits (243), Expect = 6e-025
Identities = 58/100 (58%), Positives = 66/100 (66%)
Frame = +1 / +1
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 73 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 252
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTG 399
+VLA SRL V TPAA+P +AFA ITS LNL++ TG
Sbjct: 253 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TG 372
Score = 110 bits (234), Expect = 1e-023
Identities = 56/100 (56%), Positives = 64/100 (64%)
Frame = +3 / +3
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 75 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 254
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHRP 401
GVGRVQ E+ Q V VR DHL+ ELE+ L+RP
Sbjct: 255 GVGRVQVVGENAGGQSVLACVRPLDHLVEVIELED*LNRP 374
>gb|BF253896.2|BF253896 HVSMEf0002G19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002G19f, mRNA sequence
Length = 844
Score = 192 bits (413), Expect(2) = 6e-049
Identities = 73/137 (53%), Positives = 99/137 (72%)
Frame = -3 / +3
Query: 614 VGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFADAK 435
VGDPF GPQ+D EQF ++LRY++ G GATL+ GG G++G+YI+PT+FAD K
Sbjct: 327 VGDPFDVATNMGPQVDKEQFERVLRYIEHGKSEGATLLTGGKPAGDKGYYIEPTIFADVK 506
Query: 434 DEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGT 255
++MKIA++EIFGPV +++KF V+E I +AN T YGLA G+ T++LD AN +SR++RA T
Sbjct: 507 EDMKIAQDEIFGPVMSLMKFKTVDEAIEKANCTKYGLAXGIITKNLDIANKVSRSVRAXT 686
Query: 254 VWVNCYDVFDATIPFGG 204
V VNCY D P G
Sbjct: 687 VXVNCYFALDPEAPSAG 737
Score = 127 bits (271), Expect = 8e-029
Identities = 70/137 (51%), Positives = 76/137 (55%)
Frame = +1 / -1
Query: 205 PPNGMVASNTS*QFTHTVPARSARDRVLAASRLRVNTPAASP*GVAFARRITSSTPLNLR 384
P G S *QFT TV AR+ D +LA S+ V P ASP V A I SST LN
Sbjct: 736 PAEGASGSRAK*QFTXTVXARTDLDTLLAMSKFLVMIPXASPYLVQLAFSIASSTVLNFM 557
Query: 385 MVCTGPNISSRAIFISSLASANTVGCM*KPLSPTLSPPATRVAPLSTPD*TYRKILLNCS 564
TGP ISS AIF+SSL SAN VG M* PLSP PP RVAP P Y + L NCS
Sbjct: 556 RDITGPKISS*AIFMSSLTSANMVGSM*YPLSPAGLPPVRRVAPSLLPCSMYLRTLSNCS 377
Query: 565 PSI*GPCSTPSLKGSPT 615
S GP + GSPT
Sbjct: 376 LSTWGPMLVATSNGSPT 326
Score = 22.1 bits (42), Expect(2) = 6e-049
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1 / +3
Query: 679 FVHERVYDEFVE 644
+V E +YDEFV+
Sbjct: 261 YVQEGIYDEFVK 296
>gb|BJ546487.1|BJ546487 BJ546487 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42a08 3', mRNA sequence
Length = 557
Score = 193 bits (415), Expect = 1e-048
Identities = 76/100 (76%), Positives = 90/100 (90%)
Frame = -3 / -2
Query: 398 PVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVWVNCYDVFDAT 219
PVQ+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL+RALRAGT+WVNC+D+FDA
Sbjct: 556 PVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIFDAA 377
Query: 218 IPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
IPFGGYKMSG+GREKGI +L+NYLQ KAVVT +KNPAWL*
Sbjct: 376 IPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 257
Score = 114 bits (243), Expect = 6e-025
Identities = 58/100 (58%), Positives = 66/100 (66%)
Frame = +1 / +3
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 258 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 437
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTG 399
+VLA SRL V TPAA+P +AFA ITS LNL++ TG
Sbjct: 438 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKID*TG 557
Score = 105 bits (223), Expect = 3e-022
Identities = 54/99 (54%), Positives = 63/99 (63%)
Frame = +3 / +2
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 260 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 439
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHR 398
GVGRVQ ++ Q V VR DHL+ ELE+ L+R
Sbjct: 440 GVGRVQVVGKNAGGQSVLACVRPLDHLVEVIELED*LNR 556
>gb|BJ546503.1|BJ546503 BJ546503 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42e14 3', mRNA sequence
Length = 530
Score = 193 bits (415), Expect = 1e-048
Identities = 76/100 (76%), Positives = 90/100 (90%)
Frame = -3 / -1
Query: 398 PVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVWVNCYDVFDAT 219
PVQ+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL+RALRAGT+WVNC+D+FDA
Sbjct: 530 PVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIFDAA 351
Query: 218 IPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
IPFGGYKMSG+GREKGI +L+NYLQ KAVVT +KNPAWL*
Sbjct: 350 IPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 231
Score = 112 bits (239), Expect = 2e-024
Identities = 56/96 (58%), Positives = 64/96 (66%)
Frame = +1 / +1
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
++HAGFL VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR
Sbjct: 232 HNHAGFLSAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARV 411
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRM 387
+VLA SRL V TPAA+P +AFA ITS LNL++
Sbjct: 412 KVLAVSRLLVKTPAANPYWLAFALLITSLRSLNLKI 519
Score = 105 bits (223), Expect = 3e-022
Identities = 54/99 (54%), Positives = 63/99 (63%)
Frame = +3 / +3
Query: 102 QPCGVLDGCDDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQ 281
QP VL DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQ
Sbjct: 234 QPRRVLKRGDDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQ 413
Query: 282 GVGRVQAPREHPRRQPVGRRVRAPDHLLHAAELENGLHR 398
GVGRVQ ++ Q V VR DHL+ ELE+ L+R
Sbjct: 414 GVGRVQVVGKNAGGQSVLACVRPLDHLVEVIELED*LNR 530
>gb|BQ464230.1|BQ464230 HF01L06T HF Hordeum vulgare subsp. vulgare cDNA clone HF01L06
5-PRIME, mRNA sequence
Length = 511
Score = 191 bits (412), Expect = 3e-048
Identities = 74/127 (58%), Positives = 97/127 (76%)
Frame = -3 / +3
Query: 479 ERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRS 300
++G+YI+P +F D KD+M IA+EEIFGPV ++KF +EEVI++AN+T YGLAAGV T++
Sbjct: 18 DKGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKN 197
Query: 299 LDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPI 120
+D NT+SR++R+G VWVNCY FD PFGG KMSG G++ G AL YL TK VVTP+
Sbjct: 198 IDTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPL 377
Query: 119 KNPAWL* 99
N WL*
Sbjct: 378 YNTPWL* 398
Score = 116 bits (247), Expect = 2e-025
Identities = 64/119 (53%), Positives = 67/119 (56%)
Frame = +1 / -1
Query: 124 GVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRL 303
GVTT V R L RA +P S P PLIL PPNG S *Q T T P + RD V S
Sbjct: 373 GVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMF 194
Query: 304 RVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVGCM*KPLS 480
V TPAA P* V FA ITSS LN TGP ISS AI +SSL S G M* PLS
Sbjct: 193 LVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTSVKMAGSM**PLS 17
>gb|CA018967.1|CA018967 HV10E09r HV Hordeum vulgare subsp. vulgare cDNA clone HV10E09
5-PRIME, mRNA sequence
Length = 298
Score = 187 bits (402), Expect = 7e-047
Identities = 74/96 (77%), Positives = 87/96 (90%)
Frame = -3 / +1
Query: 413 EEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVWVNCYD 234
EEIFGPVQ+I KF+ + EVI+RANA+ YGLAAGVFT +LD ANTL+RALRAGT+WVNC+D
Sbjct: 7 EEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIWVNCFD 186
Query: 233 VFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVT 126
+FDA IPFGGYKMSG+GREKGI +L+NYLQ KAVVT
Sbjct: 187 IFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVT 294
Score = 115 bits (245), Expect = 3e-025
Identities = 56/95 (58%), Positives = 64/95 (67%)
Frame = +3 / -2
Query: 129 DDGLCLEVVAEGVDALLPPDAAHLVAAERDGGVEHVVAVHPHGARPQRPRQGVGRVQAPR 308
DD L L+VV + VDALLP DAAHLV AE D G+E V AVHP A P+ RQGVGRVQ
Sbjct: 291 DDRLDLQVVLQAVDALLPTDAAHLVPAEGDRGIEDVKAVHPDRAGPEGTRQGVGRVQVVG 112
Query: 309 EHPRRQPVGRRVRAPDHLLHAAELENGLHRPEYLL 413
E+ Q V VR DHL+ ELE+ L+RPEYLL
Sbjct: 111 ENAGGQSVLACVRPLDHLVEVIELED*LNRPEYLL 7
Score = 111 bits (238), Expect = 3e-024
Identities = 58/96 (60%), Positives = 64/96 (66%)
Frame = +1 / -3
Query: 127 VTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRLR 306
VTTA R* R MPFS P PLIL PP G+ AS S QFT VPA AR +VLA SRL
Sbjct: 293 VTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSRLL 114
Query: 307 VNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISS 414
V TPAA+P +AFA ITS LNL++ TGPNISS
Sbjct: 113 VKTPAANPYWLAFALLITSLRSLNLKID*TGPNISS 6
>gb|BG300455.1|BG300455 HVSMEb0017B23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017B23f, mRNA sequence
Length = 853
Score = 184 bits (397), Expect = 3e-046
Identities = 74/108 (68%), Positives = 91/108 (84%)
Frame = -3 / +3
Query: 422 IAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVWVN 243
I ++EIFGPV I ++ + EVI RANA+ YGLAAGVFT +LD ANTL+RAL+AGT+WVN
Sbjct: 3 ICQKEIFGPVH*IFQYYDLYEVINRANASQYGLAAGVFTNNLDTANTLTRALKAGTIWVN 182
Query: 242 CYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
C+D+F+A IPFGGYKMSG+GREKGI +L+NYLQ KAV T + NPAWL*
Sbjct: 183 CFDIFNAAIPFGGYKMSGLGREKGIDSLKNYLQVKAVFTVLNNPAWL* 326
>gb|BQ659782.1|BQ659782 HF01L06w HF Hordeum vulgare subsp. vulgare cDNA clone HF01L06
3-PRIME, mRNA sequence
Length = 475
Score = 179 bits (386), Expect = 1e-044
Identities = 71/120 (59%), Positives = 90/120 (75%)
Frame = -3 / -2
Query: 458 PTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTL 279
P +F D KD+M IA+EEIFGPV ++KF +EEVI++AN+T YGLAAGV T+++D NT+
Sbjct: 474 PAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTV 295
Query: 278 SRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
SR++R+G VWVNCY FD PFGG KMSG G++ G AL YL TK VVTP+ N WL*
Sbjct: 294 SRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPWL* 115
Score = 108 bits (231), Expect = 3e-023
Identities = 59/112 (52%), Positives = 62/112 (55%)
Frame = +1 / +2
Query: 124 GVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRL 303
GVTT V R L RA +P S P PLIL PPNG S *Q T T P + RD V S
Sbjct: 140 GVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMF 319
Query: 304 RVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVG 459
V TPAA P* V FA ITSS LN TGP ISS AI +SSL S G
Sbjct: 320 LVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTSVKMAG 475
>gb|BI948988.1|BI948988 HVSMEl0011N01f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0011N01f, mRNA sequence
Length = 525
Score = 176 bits (379), Expect = 1e-043
Identities = 73/130 (56%), Positives = 95/130 (73%)
Frame = -3 / +3
Query: 467 YIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAA 288
YI+PTVF D KD+M IA EEIFGPV ++KF+ VEE I RAN T YGLAAGV T+++D A
Sbjct: 3 YIEPTVFTDVKDDMIIAGEEIFGPVMCLMKFTTVEEAIARANNTRYGLAAGVVTKNIDVA 182
Query: 287 NTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPA 108
N ++R++RAG VWVNCY D+ PFGG KMSG G++ G++AL +L+ K VTP+ +
Sbjct: 183 NRMTRSIRAGVVWVNCYFAMDSDCPFGGRKMSGFGQDDGMHALEQFLRRKGRVTPVYDFP 362
Query: 107 WL*ITSSVLV 78
WL* + LV
Sbjct: 363 WL*ASPF*LV 392
Score = 108 bits (231), Expect = 3e-023
Identities = 63/123 (51%), Positives = 67/123 (54%)
Frame = +1 / -3
Query: 100 YSHAGFLMGVTTAFVWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARD 279
YS GVT R A MP S P PLIL PPNG S *QFTHT PAR R
Sbjct: 370 YSQGKS*TGVTRPLRRRNCSSACMPSSCPNPLILRPPNGQSLSMAK*QFTHTTPARIDRV 191
Query: 280 RVLAASRLRVNTPAASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVG 459
+LA S V TPAASP V A I SST +N TGP ISS A+ +SSL S TVG
Sbjct: 190 ILLATSMFLVTTPAASPYLVLLALAIASSTVVNFIRHMTGPKISSPAMIMSSLTSVKTVG 11
Query: 460 CM* 468
M*
Sbjct: 10 SM* 2
>gb|BQ761582.1|BQ761582 EBem10_SQ001_N02_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ001_N02 5', mRNA sequence
Length = 347
Score = 173 bits (372), Expect = 1e-042
Identities = 66/114 (57%), Positives = 88/114 (77%)
Frame = -3 / -1
Query: 479 ERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRS 300
++G+YI+P +F D KD+M IA+EEIFGPV ++KF +EEVI++AN+T YGLAAGV T++
Sbjct: 344 DKGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKN 165
Query: 299 LDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTK 138
+D NT+SR++R+G VWVNCY FD PFGG KMSG G++ G AL YL TK
Sbjct: 164 IDTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTK 3
Score = 106 bits (227), Expect = 1e-022
Identities = 60/113 (53%), Positives = 63/113 (55%)
Frame = +1 / +1
Query: 142 VWR*LRRA*MPFSRPTPLIL*PPNGMVASNTS*QFTHTVPARSARDRVLAASRLRVNTPA 321
V R L RA +P S P PLIL PPNG S *Q T T P + RD V S V TPA
Sbjct: 7 VCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMFLVTTPA 186
Query: 322 ASP*GVAFARRITSSTPLNLRMVCTGPNISSRAIFISSLASANTVGCM*KPLS 480
A P* V FA ITSS LN TGP ISS AI +SSL S G M* PLS
Sbjct: 187 ARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTSVKMAGSM**PLS 345
>gb|BQ466268.1|BQ466268 HT02B02r HT Hordeum vulgare subsp. vulgare cDNA clone HT02B02
5-PRIME, mRNA sequence
Length = 438
Score = 163 bits (351), Expect = 8e-040
Identities = 66/110 (60%), Positives = 83/110 (75%)
Frame = -3 / -3
Query: 428 MKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSLDAANTLSRALRAGTVW 249
M IA+EEIFGPV ++KF +EEVI++AN+T YGLAAGV T+++D NT+SR++R+G VW
Sbjct: 436 MSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVW 257
Query: 248 VNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIKNPAWL* 99
VNCY FD PFGG KMSG G++ G AL YL TK VVTP+ N WL*
Sbjct: 256 VNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPWL* 107
>gb|BJ549890.1|BJ549890 BJ549890 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35f16 3', mRNA sequence
Length = 480
Score = 162 bits (348), Expect = 2e-039
Identities = 63/78 (80%), Positives = 72/78 (92%)
Frame = -3 / -2
Query: 332 YGLAAGVFTRSLDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRN 153
YGLAAGVFT +LD ANTL+RALRAGT+WVNC+D+FDA IPFGGYKMSG+GREKGI +L+N
Sbjct: 473 YGLAAGVFTNNLDTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKN 294
Query: 152 YLQTKAVVTPIKNPAWL* 99
YLQ KAVVT +KNPAWL*
Sbjct: 293 YLQVKAVVTALKNPAWL* 240
>gb|BF260313.2|BF260313 HVSMEf0021K17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021K17f, mRNA sequence
Length = 542
Score = 143 bits (307), Expect(2) = 2e-034
Identities = 53/99 (53%), Positives = 74/99 (74%)
Frame = -3 / +3
Query: 614 VGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDRVGERGFYIQPTVFADAK 435
V DPF GPQ+D EQF ++L+Y++ G GATL+ GG G++G+YI+PT+FAD K
Sbjct: 246 VRDPFDVATNMGPQVDKEQFERVLKYIEHGKSEGATLLTGGKPAGDKGYYIEPTIFADVK 425
Query: 434 DEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAA 318
++MKIA++EIFGPV +++KF V+E I +AN T YGLAA
Sbjct: 426 EDMKIAQDEIFGPVMSLMKFKTVDEAIEKANCTKYGLAA 542
Score = 22.1 bits (42), Expect(2) = 2e-034
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1 / +3
Query: 679 FVHERVYDEFVE 644
+V E +YDEFV+
Sbjct: 180 YVQEGIYDEFVK 215
>dbj|AB063178.1| Hordeum vulgare BBD2 mRNA for betaine aldehyde dehydrogenase,
complete cds
Length = 1889
Score = 120 bits (256), Expect(2) = 2e-033
Identities = 52/125 (41%), Positives = 68/125 (54%)
Frame = -3 / +2
Query: 479 ERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRS 300
E+GF+I+PT+ D M+I REE+FGPV + +FS EE I AN T YGLA V +
Sbjct: 1157 EKGFFIEPTIITDINTSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGD 1336
Query: 299 LDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPI 120
+ L+ + AG +WVNC P+GG K SG GRE G + NYL K V
Sbjct: 1337 RERCQRLAEEIEAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYT 1516
Query: 119 KNPAW 105
+ W
Sbjct: 1517 SDAPW 1531
Score = 41.8 bits (85), Expect(2) = 2e-033
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3 / +2
Query: 614 VGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDR 486
V DP +G GP + Q+ KI ++V + GAT++ GG R
Sbjct: 1016 VSDPLEEGCRLGPVVSEGQYEKIKKFVANAKTEGATILTGGVR 1144
>gb|BG368878.2|BG368878 HVSMEi0021B19f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021B19f, mRNA sequence
Length = 749
Score = 120 bits (256), Expect(2) = 2e-033
Identities = 52/125 (41%), Positives = 68/125 (54%)
Frame = -3 / +2
Query: 479 ERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRS 300
E+GF+I+PT+ D M+I REE+FGPV + +FS EE I AN T YGLA V +
Sbjct: 164 EKGFFIEPTIITDINTSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGD 343
Query: 299 LDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPI 120
+ L+ + AG +WVNC P+GG K SG GRE G + NYL K V
Sbjct: 344 RERCQRLAEEIEAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYT 523
Query: 119 KNPAW 105
+ W
Sbjct: 524 SDAPW 538
Score = 41.8 bits (85), Expect(2) = 2e-033
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3 / +2
Query: 614 VGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDR 486
V DP +G GP + Q+ KI ++V + GAT++ GG R
Sbjct: 23 VSDPLEEGCRLGPVVSEGQYEKIKKFVANAKTEGATILTGGVR 151
>gb|BJ471121.1|BJ471121 BJ471121 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30n10 5', mRNA sequence
Length = 576
Score = 120 bits (256), Expect(2) = 2e-033
Identities = 52/125 (41%), Positives = 68/125 (54%)
Frame = -3 / +2
Query: 479 ERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRS 300
E+GF+I+PT+ D M+I REE+FGPV + +FS EE I AN T YGLA V +
Sbjct: 191 EKGFFIEPTIITDINTSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGD 370
Query: 299 LDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPI 120
+ L+ + AG +WVNC P+GG K SG GRE G + NYL K V
Sbjct: 371 RERCQRLAEEIEAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYT 550
Query: 119 KNPAW 105
+ W
Sbjct: 551 SDAPW 565
Score = 41.8 bits (85), Expect(2) = 2e-033
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3 / +2
Query: 614 VGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDR 486
V DP +G GP + Q+ KI ++V + GAT++ GG R
Sbjct: 50 VSDPLEEGCRLGPVVSEGQYEKIKKFVANAKTEGATILTGGVR 178
>gb|BJ468318.1|BJ468318 BJ468318 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38d10 3', mRNA sequence
Length = 713
Score = 120 bits (256), Expect(2) = 6e-033
Identities = 52/125 (41%), Positives = 68/125 (54%)
Frame = -3 / -3
Query: 479 ERGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRS 300
E+GF+I+PT+ D M+I REE+FGPV + +FS EE I AN T YGLA V +
Sbjct: 528 EKGFFIEPTIITDINTSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGD 349
Query: 299 LDAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPI 120
+ L+ + AG +WVNC P+GG K SG GRE G + NYL K V
Sbjct: 348 RERCQRLAEEIEAGCIWVNCSQPCFCQAPWGGNKRSGFGRELGEGGIDNYLSIKQVTEYT 169
Query: 119 KNPAW 105
+ W
Sbjct: 168 SDAPW 154
Score = 40.5 bits (82), Expect(2) = 6e-033
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3 / -3
Query: 614 VGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDR 486
V DP G GP + Q+ KI ++V + GAT++ GG R
Sbjct: 669 VSDPLEKGCRLGPVVSEGQYEKIKKFVANAKTEGATILTGGVR 541
>dbj|AB063179.1| Hordeum vulgare BBD1 mRNA for betaine aldehyde dehydrogenase,
complete cds
Length = 1909
Score = 115 bits (246), Expect(2) = 7e-032
Identities = 48/121 (39%), Positives = 67/121 (55%)
Frame = -3 / +3
Query: 476 RGFYIQPTVFADAKDEMKIAREEIFGPVQTILKFSGVEEVIRRANATPYGLAAGVFTRSL 297
+GF+I+PT+ M+I REE+FGPV + F E + AN T YGLA GV + L
Sbjct: 1188 KGFFIEPTIITGVSTSMQIWREEVFGPVICVKVFKTESEAVELANDTHYGLAGGVISDDL 1367
Query: 296 DAANTLSRALRAGTVWVNCYDVFDATIPFGGYKMSGVGREKGIYALRNYLQTKAVVTPIK 117
+ +++ + +G VW+NC P+GG K SG GRE G + L NYL K V K
Sbjct: 1368 ERCERIAKVIHSGIVWINCSQPTLVQAPWGGNKRSGFGRELGEWGLENYLSVKQVTRYCK 1547
Query: 116 N 114
+
Sbjct: 1548 D 1550
Score = 41.4 bits (84), Expect(2) = 7e-032
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3 / +3
Query: 614 VGDPFRDGVEQGPQIDGEQFNKILRYVQSGVDSGATLVAGGDR 486
+ DP +G G I Q+ KI +++ + GAT++ GGDR
Sbjct: 1044 ISDPLEEGCRLGSVISKGQYEKIKKFISTARSEGATILHGGDR 1172
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 300,982,631
Number of Sequences: 312970
Number of extensions: 5681206
Number of successful extensions: 144047
Number of sequences better than 1.0e-020: 105
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 7380507366
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)