TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521686.2.1
(2104 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA030582.1|CA030582 HX07H18r HX Hordeum vulgare subsp. v... 171 2e-072
gb|CA009374.1|CA009374 HU13P05r HU Hordeum vulgare subsp. v... 84 4e-050
gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare s... 119 2e-045
gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa... 111 1e-044
gb|BG416626.2|BG416626 HVSMEk0013K23f Hordeum vulgare testa... 105 8e-044
gb|BU996956.1|BU996956 HI06G16r HI Hordeum vulgare subsp. v... 124 4e-037
gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedl... 94 2e-036
gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. v... 75 2e-036
gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA li... 72 2e-035
gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA li... 72 2e-035
gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA li... 104 4e-035
gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA li... 70 7e-035
gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA li... 70 7e-035
gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachi... 74 1e-034
gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA li... 104 2e-034
gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA li... 100 9e-034
gb|BI776301.2|BI776301 EBem04_SQ001_H10_R embryo, 12 DPA, n... 114 9e-034
gb|BF253422.2|BF253422 HVSMEf0001G02f Hordeum vulgare seedl... 114 1e-033
gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA li... 104 3e-033
gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA li... 100 5e-032
gb|BI958239.1|BI958239 HVSMEn0014A11f Hordeum vulgare rachi... 92 7e-032
gb|BE216646.1|BE216646 HV_CEb0011B08f Hordeum vulgare seedl... 110 9e-032
gb|AU252316.1|AU252316 AU252316 salt-stressed barley root c... 63 2e-031
gb|BE519743.1|BE519743 HV_CEb0021A21f Hordeum vulgare seedl... 58 6e-031
gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. v... 77 8e-031
gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA li... 79 8e-031
gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedl... 75 1e-030
gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA li... 112 2e-030
gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA li... 112 2e-030
gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA li... 112 2e-030
gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA li... 112 2e-030
gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA li... 112 2e-030
gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA li... 112 2e-030
gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA li... 112 2e-030
gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA li... 112 2e-030
gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA li... 112 2e-030
gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA li... 112 2e-030
gb|BF259778.3|BF259778 HVSMEf0020D20f Hordeum vulgare seedl... 66 4e-030
gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA li... 111 4e-030
gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA li... 105 1e-029
gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA li... 75 1e-029
gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P4... 55 2e-029
gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA li... 104 4e-029
gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA li... 104 4e-029
gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA li... 104 4e-029
gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA li... 111 5e-029
gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA li... 111 5e-029
gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA li... 112 1e-028
emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for p... 55 2e-028
gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA li... 73 2e-028
gb|AJ434580.1|AJ434580 AJ434580 S00002 Hordeum vulgare subs... 73 2e-028
gb|CA018612.1|CA018612 HV09C09r HV Hordeum vulgare subsp. v... 60 2e-028
gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA li... 73 2e-028
gb|AV916579.1|AV916579 AV916579 K. Sato unpublished cDNA li... 52 2e-028
gb|BI956493.1|BI956493 HVSMEn0003M04f Hordeum vulgare rachi... 92 3e-028
gb|BM443899.2|BM443899 EBem09_SQ001_P08_R embryo, 1 Day ger... 125 1e-027
gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA li... 100 2e-027
gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA li... 59 2e-027
gb|BI960706.1|BI960706 HVSMEn0001B07f Hordeum vulgare rachi... 87 3e-027
gb|CA009631.1|CA009631 HU14K18r HU Hordeum vulgare subsp. v... 73 9e-027
gb|BI955765.1|BI955765 HVSMEm0024G17f Hordeum vulgare green... 65 1e-026
gb|AV912967.1|AV912967 AV912967 K. Sato unpublished cDNA li... 75 1e-026
gb|BU999462.1|BU999462 HI14J11r HI Hordeum vulgare subsp. v... 72 2e-026
gb|BQ756489.1|BQ756489 EBem09_SQ001_N20_R embryo, 1 Day ger... 120 4e-026
gb|BF627303.3|BF627303 HVSMEb0004I01f Hordeum vulgare seedl... 64 4e-026
gb|AL504160.1|AL504160 AL504160 Hordeum vulgare Barke roots... 74 6e-026
gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA li... 100 1e-025
gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA li... 117 2e-025
gb|BE558465.1|BE558465 HV_CEb0017M13f Hordeum vulgare seedl... 98 2e-025
gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA li... 59 2e-025
gb|AV931728.1|AV931728 AV931728 K. Sato unpublished cDNA li... 74 5e-025
gb|BI957225.1|BI957225 HVSMEn0008D16f Hordeum vulgare rachi... 92 9e-025
gb|CB875167.1|CB875167 HX07H18w HX Hordeum vulgare subsp. v... 114 2e-024
gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA li... 100 2e-024
gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA li... 96 2e-024
gb|BF624750.2|BF624750 HVSMEa0017K07f Hordeum vulgare seedl... 81 2e-024
gb|CA005397.1|CA005397 HU10K20u HU Hordeum vulgare subsp. v... 53 3e-024
gb|CA013705.1|CA013705 HT09E03r HT Hordeum vulgare subsp. v... 80 4e-024
gb|CA019349.1|CA019349 HV11L11r HV Hordeum vulgare subsp. v... 75 4e-024
gb|AV921548.1|AV921548 AV921548 K. Sato unpublished cDNA li... 100 6e-024
gb|AY551434.1| Hordeum vulgare subsp. vulgare ent-kaurene o... 52 3e-023
gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA li... 100 3e-023
gb|BF628382.2|BF628382 HVSMEb0003O04f Hordeum vulgare seedl... 84 1e-022
gb|BJ475646.1|BJ475646 BJ475646 K. Sato unpublished cDNA li... 81 1e-022
gb|BJ460485.1|BJ460485 BJ460485 K. Sato unpublished cDNA li... 93 1e-022
gb|BE519761.3|BE519761 HV_CEb0021C04f Hordeum vulgare seedl... 84 1e-022
gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA li... 88 6e-022
gb|BJ461185.1|BJ461185 BJ461185 K. Sato unpublished cDNA li... 105 7e-022
gb|BQ664275.1|BQ664275 HV02K08u HV Hordeum vulgare subsp. v... 74 9e-022
gb|BQ664209.1|BQ664209 HV02F12u HV Hordeum vulgare subsp. v... 84 1e-021
gb|BF631513.2|BF631513 HVSMEb0016D19f Hordeum vulgare seedl... 78 2e-021
gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedl... 43 2e-021
gb|BM817083.1|BM817083 HC01F04_T3.ab1 HC Hordeum vulgare su... 77 3e-021
gb|BI952928.1|BI952928 HVSMEm0008H17f Hordeum vulgare green... 57 3e-021
gb|BM444927.1|BM444927 EBem09_SQ006_O21_R embryo, 1 Day ger... 103 4e-021
gb|BF624213.1|BF624213 HVSMEa0012L22f Hordeum vulgare seedl... 73 6e-021
gb|CA012725.1|CA012725 HT06E05r HT Hordeum vulgare subsp. v... 84 8e-021
>gb|CA030582.1|CA030582 HX07H18r HX Hordeum vulgare subsp. vulgare cDNA clone HX07H18
5-PRIME, mRNA sequence
Length = 616
Score = 171 bits (369), Expect(2) = 2e-072
Identities = 72/118 (61%), Positives = 87/118 (73%)
Frame = -2 / +2
Query: 1137 QNSAALNDNADFVDVLLSLEGDEKLGDDDMVAILWEMVFRGTDTTALLTEWCMAELVRHP 958
+++AA DF DVLLSL+G +KL D DM+A+LWEMVFRGTDT A+L EW +A LV H
Sbjct: 41 RSAAASAGVKDFTDVLLSLQGGDKLADADMIAVLWEMVFRGTDTVAVLMEWVLARLVLHR 220
Query: 957 AVQARVRAEVDAAVGAGGCPTDADVARMPYLQAVVKETLRAHPPGPLLSWARLATADV 784
VQARV E+D VG ++D A + YL AV+KETLR HPPGPLLSWARLAT+DV
Sbjct: 221 DVQARVHEELDRVVGRDRAVDESDAASLAYLHAVIKETLRVHPPGPLLSWARLATSDV 394
Score = 122 bits (262), Expect(2) = 2e-072
Identities = 46/71 (64%), Positives = 57/71 (80%)
Frame = -2 / +2
Query: 774 NGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAG 595
+G ++PAGTTAMVNMWAITHD VWA+P+ F PERF+ + A++ V G DLRLAPFGAG
Sbjct: 401 DGFLIPAGTTAMVNMWAITHDPDVWAEPEEFRPERFVAGQPAAELSVMGSDLRLAPFGAG 580
Query: 594 RRVCPGKNLGL 562
RR CPGK+L +
Sbjct: 581 RRSCPGKSLAM 613
Score = 94.5 bits (200), Expect(2) = 1e-035
Identities = 42/76 (55%), Positives = 46/76 (60%)
Frame = +1 / -1
Query: 568 QVLAGADATPGAERGQAEVDAADVHVGAALGGQEPLRRERVRVGPHGGIVGYGPHIHHRR 747
Q L GA PG ER QAEV +G L G EPLR E R+GPH G+VGYGPH+HH R
Sbjct: 607 QALPGAAPPPGPERRQAEVRPHHGELGRRLSGDEPLRAELFRLGPHVGVVGYGPHVHHGR 428
Query: 748 GASRDHHAVAEWHVGG 795
GAS D AV GG
Sbjct: 427 GASGDEEAVHAHVRGG 380
Score = 87.7 bits (185), Expect(2) = 7e-021
Identities = 39/87 (44%), Positives = 45/87 (51%)
Frame = +2 / -2
Query: 569 RFLPGQTRRPAPNGXXXXXXXXXXXXXXXXEGRNRSGANASGSAHTAASWVMAHIFTIAV 748
R PGQ RPAPNG NRSG N+SGSAHT+ SWVMAH+FT+AV
Sbjct: 606 RLFPGQLLRPAPNGARRRSDPITESSAAGCPATNRSGRNSSGSAHTSGSWVMAHMFTMAV 427
Query: 749 VPAGTTMPLQSGTSAVARRAQLSSGPG 829
VPAG P + R + S G
Sbjct: 426 VPAGMRKPSTRTSEVARRAHESSGPGG 346
Score = 77.1 bits (162), Expect(2) = 1e-035
Identities = 39/87 (44%), Positives = 46/87 (52%)
Frame = +1 / -1
Query: 847 LLHNRLQVRHARHVGVGGATSGTDSRVDLGAHPRLHRRVAHQLRHAPLGQKRRRVRTAED 1026
LL + ++V +G+ V L HPRLH V HQ PL Q R VR AE
Sbjct: 331 LLDDGVEVGEGGRIGLVDGAVAPHHAVKLLVHPRLHVPVQHQPGQHPLHQHRHCVRPAEH 152
Query: 1027 HLPEDGDHVVVAELLVTLEGEEHVDEV 1107
HLPE DHV V EL+ LEGE+ V EV
Sbjct: 151 HLPEHRDHVGVGELVAALEGEQDVGEV 71
Score = 37.7 bits (76), Expect(2) = 7e-021
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +2 / -2
Query: 968 TSSAMHHSVRSAVVSVPRKTISQRMATM 1051
TS A HS+ +A VSVPR TISQ A M
Sbjct: 210 TSRASTHSISTATVSVPRNTISQSTAIM 127
>gb|CA009374.1|CA009374 HU13P05r HU Hordeum vulgare subsp. vulgare cDNA clone HU13P05
5-PRIME, mRNA sequence
Length = 537
Score = 84.5 bits (178), Expect(4) = 4e-050
Identities = 33/45 (73%), Positives = 37/45 (82%)
Frame = -2 / +1
Query: 645 DVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWA 511
DV V G DLRLAPFGAGRRVCPGK L L TV LW+A+L+H F+WA
Sbjct: 229 DVSVLGSDLRLAPFGAGRRVCPGKMLALATVHLWLAQLLHRFEWA 363
Score = 74.4 bits (156), Expect(4) = 4e-050
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = -2 / +1
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSE 655
G +VPAGTTAMVNMWAI HDAAVW +P+ F PERF+ +
Sbjct: 115 GHLVPAGTTAMVNMWAIAHDAAVWPEPELFRPERFMEED 231
Score = 67.0 bits (140), Expect(2) = 5e-023
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = +2 / -2
Query: 668 NRSGANASGSAHTAASWVMAHIFTIAVVPAGTTMPLQSGTSAVARRAQLSSGPG 829
NRSG N+SGS HTAAS MAH+FTIAVVPAGT P + +R + S G
Sbjct: 218 NRSGRNSSGSGHTAASCAMAHMFTIAVVPAGTRWPPTCASCTASRAHERSGPGG 57
Score = 63.4 bits (132), Expect(4) = 4e-050
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -2 / +1
Query: 876 MPYLQAVVKETLRAHPPGPLLSWARLATAD 787
+PY+Q +VKETLR HPPGPLLSWARLA D
Sbjct: 13 LPYIQCIVKETLRMHPPGPLLSWARLAVHD 102
Score = 62.0 bits (129), Expect(2) = 5e-023
Identities = 29/49 (59%), Positives = 30/49 (61%)
Frame = +1 / -1
Query: 499 AVRQGPLEGVHEAGNPEAHGGEAQVLAGADATPGAERGQAEVDAADVHV 645
A R PLE V + PE GGE Q L GA A PGAERGQAEV A HV
Sbjct: 375 APRGSPLEPVKQLREPEVDGGEGQHLPGAHAPPGAERGQAEVAAQHAHV 229
Score = 34.1 bits (68), Expect(4) = 4e-050
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = -2 / +1
Query: 498 AAAVCLDEVLKLSLEMKTPLVAAAIPRTA*SVLPP 394
+ +V L E LK+SLEM TPLV A+ R S + P
Sbjct: 367 SGSVDLSERLKMSLEMATPLVCKAVAR*GQSCMLP 471
>gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB105E09_SK.ab1 similar to Steroid
17-alpha-monooxygenase,Unspecific monooxygenase, mRNA
sequence
Length = 884
Score = 119 bits (254), Expect(3) = 2e-045
Identities = 48/120 (40%), Positives = 71/120 (59%)
Frame = -2 / +2
Query: 774 NGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAG 595
+G +VPAGT ++N+WAI D++ W + + F PERFL A V+ +G D + PFGAG
Sbjct: 377 DGYMVPAGTHVLINVWAIGRDSSYWEEAEEFIPERFLDEGSAAGVNFKGNDFQFLPFGAG 556
Query: 594 RRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIPRT 415
RR+CPG NLG+ TV L +A L++ F W LP G ++ L M+ +P++
Sbjct: 557 RRMCPGINLGIATVELMLANLMYHFDWELPLGVERKDINMTELFGLTMRRKEKLMLVPKS 736
Score = 56.1 bits (116), Expect(3) = 2e-045
Identities = 25/67 (37%), Positives = 45/67 (67%)
Frame = -2 / +2
Query: 1107 DFVDVLLSLEGDEKLGDDDMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEV 928
+FVD+LLS++ + L +DM A+L ++ F T+T++ E+ +AELVR P + +++ EV
Sbjct: 47 NFVDILLSVQMEYGLTKEDMKALLTDVFFGSTETSSNTLEFTLAELVRSPCLIGKLQDEV 226
Query: 927 DAAVGAG 907
+ V +G
Sbjct: 227 RSIVPSG 247
Score = 47.3 bits (97), Expect(3) = 2e-045
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = -2 / +2
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLL 814
T+AD+++M YL+AV+KE+LR HP PLL
Sbjct: 260 TEADISKMTYLRAVIKESLRLHPVAPLL 343
>gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0005E23f, mRNA sequence
Length = 922
Score = 111 bits (237), Expect(3) = 1e-044
Identities = 45/97 (46%), Positives = 60/97 (61%)
Frame = -2 / +3
Query: 1104 FVDVLLSLEGDEKLGDDDMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEVD 925
FVD L +L L DD + +LW+M+ G DTT + EW MAELVR+P VQ +++ E+D
Sbjct: 6 FVDALFTLREKYDLSDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEELD 185
Query: 924 AAVGAGGCPTDADVARMPYLQAVVKETLRAHPPGPLL 814
VG + D +PYL VVKE+LR HPP PL+
Sbjct: 186 NVVGRDRVMAETDFQNLPYLMDVVKESLRLHPPTPLM 296
Score = 61.6 bits (128), Expect(3) = 1e-044
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = -2 / +3
Query: 642 VDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPD 502
+D++G+D R+ PFGAGRRVCPG + G+ V + ++H +LP+
Sbjct: 450 IDIKGIDFRVLPFGAGRRVCPGAHFGINLVASMIGPMLHPLTRSLPE 590
Score = 46.9 bits (96), Expect(3) = 1e-044
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2 / +3
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFL 664
G +P G MVN+WA+ D VW P F PER L
Sbjct: 333 GYNIPKGANVMVNVWAVARDPKVWTSPLEFRPERSL 440
>gb|BG416626.2|BG416626 HVSMEk0013K23f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0013K23f, mRNA sequence
Length = 701
Score = 105 bits (223), Expect(3) = 8e-044
Identities = 40/81 (49%), Positives = 56/81 (69%)
Frame = -2 / +2
Query: 1149 RRRRQNSAALNDNADFVDVLLSLEGDEKLGDDDMVAILWEMVFRGTDTTALLTEWCMAEL 970
RR + A + DFVDVLL L+G++K+ + DM+A+LWEM+FRGTDT A+L EW MA +
Sbjct: 377 RRDSASGIADELSGDFVDVLLGLDGEDKMSESDMIAVLWEMIFRGTDTVAILMEWIMARM 556
Query: 969 VRHPAVQARVRAEVDAAVGAG 907
V HP + ++ E+D VG G
Sbjct: 557 VLHPEIHSKAVPELDPVVGRG 619
Score = 65.7 bits (137), Expect(3) = 8e-044
Identities = 30/60 (50%), Positives = 37/60 (61%)
Frame = -2 / +2
Query: 1530 HLFSPRRVASHEPGRQGDAEAMLRSIAAEQSASGAVALRPHLQAAALNNIMGSVFGTRYD 1351
HLFSPRRVA+ P R ML +A+ + G VA R L AA+LN++M VFG RYD
Sbjct: 2 HLFSPRRVAASAPHRSSIXARMLGDVASIMARHGEVAPRRFLHAASLNHVMAVVFGKRYD 181
Score = 46.4 bits (95), Expect(3) = 8e-044
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = -2 / +2
Query: 1314 LKSMVREGFELLGAFNWSDHLPWL 1243
++ MV EG++LLG FNW+DHLP+L
Sbjct: 209 VEEMVNEGYDLLGTFNWADHLPFL 280
>gb|BU996956.1|BU996956 HI06G16r HI Hordeum vulgare subsp. vulgare cDNA clone HI06G16
5-PRIME, mRNA sequence
Length = 560
Score = 124 bits (266), Expect(3) = 4e-037
Identities = 57/99 (57%), Positives = 71/99 (71%)
Frame = -2 / +1
Query: 1731 KELMAFSVGDTPAVVSSCPATAREVLAHPSFADRPVKRSARELMFARAIGFAPNGEYWRR 1552
+ LMAFS+G+T VV++ P ARE+LA P+FADRPVK SA LMF RAIGFAP G YWR
Sbjct: 88 RRLMAFSMGETRVVVTADPDVARELLASPAFADRPVKESAYGLMFHRAIGFAPYGAYWRT 267
Query: 1551 LRRVASTHLFSPRRVASHEPGRQGDAEAMLRSIAAEQSA 1435
LRRV+S+HLFSPR+VA+ R A M+ ++ SA
Sbjct: 268 LRRVSSSHLFSPRQVAASAAQRAVIARQMVDAMRPVGSA 384
Score = 35.9 bits (72), Expect(3) = 4e-037
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 1326 EAEHLKSMVREGFELLGAFNWS 1261
EA LKS+V +G++LLG NWS
Sbjct: 494 EAAELKSLVDQGYDLLGQLNWS 559
Score = 34.1 bits (68), Expect(3) = 4e-037
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = -2 / +1
Query: 1425 VALRPHLQAAALNNIMGSVFGTRYDVTSG 1339
V R L+ A+L+N+M SVFG RY++ G
Sbjct: 397 VEARRFLKRASLHNVMWSVFGRRYELDRG 483
>gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0006N15f, mRNA sequence
Length = 710
Score = 93.6 bits (198), Expect(3) = 2e-036
Identities = 36/90 (40%), Positives = 49/90 (54%)
Frame = -2 / +2
Query: 774 NGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAG 595
NG +P+GT +VN AI D W + F PERF+ A +D +G PFG G
Sbjct: 440 NGYTIPSGTRVIVNSRAIARDPNSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTG 619
Query: 594 RRVCPGKNLGLTTVGLWVARLVHAFQWALP 505
RR+CPG NL + + + + LV+ F W LP
Sbjct: 620 RRICPGINLAIGAIEIMLTNLVYHFDWKLP 709
Score = 57.0 bits (118), Expect(3) = 2e-036
Identities = 25/82 (30%), Positives = 49/82 (59%)
Frame = -2 / +2
Query: 1152 HRRRRQNSAALNDNADFVDVLLSLEGDEKLGDDDMVAILWEMVFRGTDTTALLTEWCMAE 973
H + + AL D+ D++ LLS++ + L + + A L M GTDT+ ++ E+ MA
Sbjct: 65 HEHESKPAPALGDDTDYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMAR 244
Query: 972 LVRHPAVQARVRAEVDAAVGAG 907
L+++P + +++AEV +++ G
Sbjct: 245 LMQNPDLMTKLQAEVRSSIPKG 310
Score = 41.8 bits (85), Expect(3) = 2e-036
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -2 / +2
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLL 814
T+ D+ + YL+AV+KETLR H P PLL
Sbjct: 323 TEDDLNHLAYLKAVIKETLRLHMPAPLL 406
>gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. vulgare cDNA clone HV01P03
5-PRIME, mRNA sequence
Length = 610
Score = 75.3 bits (158), Expect(3) = 2e-036
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = -2 / +2
Query: 1056 DDMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVAR 877
D +IL++ TDT+++ + W M EL+RHP V + +AEV AA G +D+ +
Sbjct: 14 DHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPK 193
Query: 876 MPYLQAVVKETLRAHPPGPLL 814
+ YL+ V+ ET R HPP +L
Sbjct: 194 LKYLRMVLSETFRMHPPATML 256
Score = 63.8 bits (133), Expect(3) = 2e-036
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = -2 / +2
Query: 645 DVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDG 499
DVD G L PFGAGRR+CPG +G+ +A L++ F WALP G
Sbjct: 407 DVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQG 553
Score = 52.8 bits (109), Expect(3) = 2e-036
Identities = 20/35 (57%), Positives = 22/35 (62%)
Frame = -2 / +2
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERF 667
G +PA T MVN WAI D A W DP+ F PERF
Sbjct: 293 GYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 397
>gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18a18 5', mRNA sequence
Length = 619
Score = 72.1 bits (151), Expect(3) = 2e-035
Identities = 29/75 (38%), Positives = 45/75 (60%)
Frame = -2 / +3
Query: 1038 LWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVARMPYLQA 859
L++ TDT+++ + W M EL+RHP V + +AEV AA G +D+ ++ YL+
Sbjct: 3 LFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRM 182
Query: 858 VVKETLRAHPPGPLL 814
V+ ET R HPP +L
Sbjct: 183 VLSETFRMHPPATML 227
Score = 63.8 bits (133), Expect(3) = 2e-035
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = -2 / +3
Query: 645 DVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDG 499
DVD G L PFGAGRR+CPG +G+ +A L++ F WALP G
Sbjct: 378 DVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQG 524
Score = 52.8 bits (109), Expect(3) = 2e-035
Identities = 20/35 (57%), Positives = 22/35 (62%)
Frame = -2 / +3
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERF 667
G +PA T MVN WAI D A W DP+ F PERF
Sbjct: 264 GYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 368
>gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36h03 5', mRNA sequence
Length = 582
Score = 72.1 bits (151), Expect(3) = 2e-035
Identities = 29/75 (38%), Positives = 45/75 (60%)
Frame = -2 / +3
Query: 1038 LWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVARMPYLQA 859
L++ TDT+++ + W M EL+RHP V + +AEV AA G +D+ ++ YL+
Sbjct: 3 LFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRM 182
Query: 858 VVKETLRAHPPGPLL 814
V+ ET R HPP +L
Sbjct: 183 VLSETFRMHPPATML 227
Score = 63.8 bits (133), Expect(3) = 2e-035
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = -2 / +3
Query: 645 DVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDG 499
DVD G L PFGAGRR+CPG +G+ +A L++ F WALP G
Sbjct: 378 DVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQG 524
Score = 52.8 bits (109), Expect(3) = 2e-035
Identities = 20/35 (57%), Positives = 22/35 (62%)
Frame = -2 / +3
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERF 667
G +PA T MVN WAI D A W DP+ F PERF
Sbjct: 264 GYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 368
>gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34j09 3', mRNA sequence
Length = 719
Score = 104 bits (221), Expect(3) = 4e-035
Identities = 38/95 (40%), Positives = 55/95 (57%)
Frame = -2 / -3
Query: 789 DVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLA 610
D + NG +P+GT +N +AI D + W P+ F PERF+ A +D +G D +
Sbjct: 462 DECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYF 283
Query: 609 PFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALP 505
PFG+GRR+CPG N T+ L + L++ F W LP
Sbjct: 282 PFGSGRRICPGINFATATIQLMLTNLMYHFDWKLP 178
Score = 45.5 bits (93), Expect(3) = 4e-035
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = -2 / -3
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLL 814
T D+ +PYL+AV+KETLR H PGPL+
Sbjct: 564 TQDDLHGLPYLKAVIKETLRLHMPGPLM 481
Score = 38.2 bits (77), Expect(3) = 4e-035
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = -2 / -3
Query: 1017 GTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAG 907
GTDT+ ++ E+ M L+++P V A ++AEV + + G
Sbjct: 687 GTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKG 577
>gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34b17 3', mRNA sequence
Length = 729
Score = 70.3 bits (147), Expect(3) = 7e-035
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = -2 / -1
Query: 1014 TDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVARMPYLQAVVKETLRA 835
TDT+++ + W M EL+RHP V + +AEV AA G +D+ ++ YL+ V+ ET R
Sbjct: 720 TDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMVLSETFRM 541
Query: 834 HPPGPLL 814
HPP +L
Sbjct: 540 HPPATML 520
Score = 63.8 bits (133), Expect(3) = 7e-035
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = -2 / -1
Query: 645 DVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDG 499
DVD G L PFGAGRR+CPG +G+ +A L++ F WALP G
Sbjct: 369 DVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQG 223
Score = 52.8 bits (109), Expect(3) = 7e-035
Identities = 20/35 (57%), Positives = 22/35 (62%)
Frame = -2 / -1
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERF 667
G +PA T MVN WAI D A W DP+ F PERF
Sbjct: 483 GYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 379
>gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6b21 3', mRNA sequence
Length = 712
Score = 70.3 bits (147), Expect(3) = 7e-035
Identities = 28/67 (41%), Positives = 42/67 (62%)
Frame = -2 / -1
Query: 1014 TDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVARMPYLQAVVKETLRA 835
TDT+++ + W M EL+RHP V + +AEV AA G +D+ ++ YL+ V+ ET R
Sbjct: 691 TDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMVLSETFRM 512
Query: 834 HPPGPLL 814
HPP +L
Sbjct: 511 HPPATML 491
Score = 63.8 bits (133), Expect(3) = 7e-035
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = -2 / -1
Query: 645 DVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDG 499
DVD G L PFGAGRR+CPG +G+ +A L++ F WALP G
Sbjct: 340 DVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQG 194
Score = 52.8 bits (109), Expect(3) = 7e-035
Identities = 20/35 (57%), Positives = 22/35 (62%)
Frame = -2 / -1
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERF 667
G +PA T MVN WAI D A W DP+ F PERF
Sbjct: 454 GYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 350
>gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024N22f, mRNA sequence
Length = 653
Score = 73.9 bits (155), Expect(3) = 1e-034
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = -2 / +2
Query: 642 VDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDG 499
+D++G D R+ PFGAGRRVCPG LG+ V + ++H F+W+LP+G
Sbjct: 308 IDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEG 451
Score = 61.1 bits (127), Expect(3) = 1e-034
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = -2 / +2
Query: 966 RHPAVQARVRAEVDAAVGAGGCPTDADVARMPYLQAVVKETLRAHPPGPLL 814
R+P VQ +++ E+D VG + D +PYL AVVKE+LR HPP PL+
Sbjct: 2 RNPXVQQKLQEELDNVVGRDRVMAETDFQNLPYLMAVVKESLRLHPPTPLM 154
Score = 51.0 bits (105), Expect(3) = 1e-034
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -2 / +2
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFL 664
G +P G MVN+WA+ D VW+ P F PERFL
Sbjct: 191 GYNIPKGANVMVNVWAVARDPKVWSSPLEFRPERFL 298
>gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 3', mRNA sequence
Length = 703
Score = 104 bits (221), Expect(3) = 2e-034
Identities = 38/95 (40%), Positives = 55/95 (57%)
Frame = -2 / -2
Query: 789 DVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLA 610
D + NG +P+GT +N +AI D + W P+ F PERF+ A +D +G D +
Sbjct: 480 DECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYF 301
Query: 609 PFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALP 505
PFG+GRR+CPG N T+ L + L++ F W LP
Sbjct: 300 PFGSGRRICPGINFATATIQLMLTNLMYHFDWKLP 196
Score = 45.5 bits (93), Expect(3) = 2e-034
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = -2 / -2
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLL 814
T D+ +PYL+AV+KETLR H PGPL+
Sbjct: 582 TQDDLHGLPYLKAVIKETLRLHMPGPLM 499
Score = 35.4 bits (71), Expect(3) = 2e-034
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = -2 / -2
Query: 1014 TDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAG 907
TDT+ ++ E+ M L+++P V A ++AEV + + G
Sbjct: 702 TDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKG 595
>gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 5', mRNA sequence
Length = 533
Score = 99.6 bits (211), Expect(3) = 9e-034
Identities = 36/92 (39%), Positives = 53/92 (57%)
Frame = -2 / +1
Query: 789 DVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLA 610
D + NG +P+GT +N +AI D + W P+ F PERF+ A +D +G D +
Sbjct: 253 DECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYF 432
Query: 609 PFGAGRRVCPGKNLGLTTVGLWVARLVHAFQW 514
PFG+GRR+CPG N T+ L + L++ F W
Sbjct: 433 PFGSGRRICPGINFATATIQLMLTNLMYHFDW 528
Score = 45.5 bits (93), Expect(3) = 9e-034
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = -2 / +1
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLL 814
T D+ +PYL+AV+KETLR H PGPL+
Sbjct: 151 TQDDLHGLPYLKAVIKETLRLHMPGPLM 234
Score = 38.2 bits (77), Expect(3) = 9e-034
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = -2 / +1
Query: 1017 GTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAG 907
GTDT+ ++ E+ M L+++P V A ++AEV + + G
Sbjct: 28 GTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKG 138
>gb|BI776301.2|BI776301 EBem04_SQ001_H10_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ001_H10 5', mRNA sequence
Length = 537
Score = 114 bits (243), Expect(2) = 9e-034
Identities = 46/97 (47%), Positives = 61/97 (62%)
Frame = -2 / +1
Query: 1104 FVDVLLSLEGDEKLGDDDMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEVD 925
FVD L +L L DD + +LW+M+ G DTT + EW MAELVR+P VQ +++ E+D
Sbjct: 70 FVDALFTLREKYDLSDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEELD 249
Query: 924 AAVGAGGCPTDADVARMPYLQAVVKETLRAHPPGPLL 814
VG + D +PYL AVVKE+LR HPP PL+
Sbjct: 250 NVVGRDRVMAETDFQNLPYLMAVVKESLRLHPPTPLM 360
Score = 51.0 bits (105), Expect(2) = 9e-034
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -2 / +1
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFL 664
G +P G MVN+WA+ D VW+ P F PERFL
Sbjct: 397 GYNIPKGANVMVNVWAVARDPKVWSSPLEFRPERFL 504
>gb|BF253422.2|BF253422 HVSMEf0001G02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0001G02f, mRNA sequence
Length = 617
Score = 114 bits (243), Expect(2) = 1e-033
Identities = 46/97 (47%), Positives = 61/97 (62%)
Frame = -2 / +1
Query: 1104 FVDVLLSLEGDEKLGDDDMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEVD 925
FVD L +L L DD + +LW+M+ G DTT + EW MAELVR+P VQ +++ E+D
Sbjct: 127 FVDALFTLREKYDLSDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEELD 306
Query: 924 AAVGAGGCPTDADVARMPYLQAVVKETLRAHPPGPLL 814
VG + D +PYL AVVKE+LR HPP PL+
Sbjct: 307 NVVGRDRVMAETDFQNLPYLMAVVKESLRLHPPTPLM 417
Score = 50.6 bits (104), Expect(2) = 1e-033
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -2 / +1
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFL 664
G +P G MVN+WA+ D VW+ P F PERFL
Sbjct: 454 GYNIPKGANVMVNVWAVARDPNVWSSPLEFKPERFL 561
>gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m23 5', mRNA sequence
Length = 660
Score = 104 bits (221), Expect(3) = 3e-033
Identities = 38/95 (40%), Positives = 55/95 (57%)
Frame = -2 / +2
Query: 789 DVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLA 610
D + NG +P+GT +N +AI D + W P+ F PERF+ A +D +G D +
Sbjct: 239 DECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYF 418
Query: 609 PFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALP 505
PFG+GRR+CPG N T+ L + L++ F W LP
Sbjct: 419 PFGSGRRICPGINFATATIQLMLTNLMYHFDWKLP 523
Score = 45.5 bits (93), Expect(3) = 3e-033
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = -2 / +2
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLL 814
T D+ +PYL+AV+KETLR H PGPL+
Sbjct: 137 TQDDLHGLPYLKAVIKETLRLHMPGPLM 220
Score = 31.8 bits (63), Expect(3) = 3e-033
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2 / +2
Query: 1017 GTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAG 907
GT L+ E+ M L+++P V A ++AEV + + G
Sbjct: 14 GTXHIXLVLEYAMVRLMQNPRVMAMLQAEVRSTIPKG 124
>gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 3', mRNA sequence
Length = 746
Score = 100 bits (213), Expect(3) = 5e-032
Identities = 38/94 (40%), Positives = 53/94 (56%)
Frame = -2 / -1
Query: 774 NGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAG 595
NG +P+GT +VN AI D + W + F PERF+ A +D +G PFG G
Sbjct: 497 NGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTG 318
Query: 594 RRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAA 493
RR+CPG N + + + +A LV+ F W LP G+A
Sbjct: 317 RRICPGINFAIAAIEIMLANLVYHFDWKLPPGSA 216
Score = 39.6 bits (80), Expect(3) = 5e-032
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -2 / -1
Query: 888 DVARMPYLQAVVKETLRAHPPGPLL 814
D+ + YL+AV+KETLR H P PLL
Sbjct: 605 DLNHLAYLKAVIKETLRLHMPAPLL 531
Score = 37.3 bits (75), Expect(3) = 5e-032
Identities = 13/37 (35%), Positives = 27/37 (72%)
Frame = -2 / -1
Query: 1017 GTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAG 907
GTDT+ ++ E+ MA L+++P + +++AEV +++ G
Sbjct: 737 GTDTSYIVMEYAMARLMQNPDLMTKLQAEVRSSIPKG 627
>gb|BI958239.1|BI958239 HVSMEn0014A11f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0014A11f,
mRNA sequence
Length = 674
Score = 92.3 bits (195), Expect(2) = 7e-032
Identities = 35/86 (40%), Positives = 56/86 (65%)
Frame = -2 / +1
Query: 1074 DEKLGDDDMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPT 895
++K+ D D+ A++ + GT+TT+ + EW +AEL+RHP + R + E+DA VG
Sbjct: 100 EDKITDTDVKALILNLFVAGTETTSTMVEWAVAELIRHPDMLKRAQEELDAVVGRDKLVA 279
Query: 894 DADVARMPYLQAVVKETLRAHPPGPL 817
++D+ R+ +L AV+KET R HP PL
Sbjct: 280 ESDLPRLAFLGAVIKETFRLHPSTPL 357
Score = 66.6 bits (139), Expect(2) = 7e-032
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = -2 / +1
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLR 616
G +P GT +VN+W I D A+W DP F P RFLP ADVDV+G LR
Sbjct: 397 GYRIPKGTELLVNVWGIARDPALWPDPLEFRPARFLPGGTHADVDVKGGRLR 552
>gb|BE216646.1|BE216646 HV_CEb0011B08f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0011B08f, mRNA sequence
Length = 994
Score = 110 bits (235), Expect(3) = 9e-032
Identities = 45/98 (45%), Positives = 55/98 (56%)
Frame = -2 / +2
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAGR 592
G VP +T + N+WAI D A W PD F PERFL V+ RG D PFG+GR
Sbjct: 224 GFAVPRDSTVIFNVWAIMRDPAAWERPDEFVPERFLGKAADKAVEFRGKDYEFIPFGSGR 403
Query: 591 RVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLD 478
R+CPG + V +A L+HAF+W LPDG LD
Sbjct: 404 RLCPGLPMAERVVPFVLASLLHAFEWRLPDGVLCDELD 517
Score = 39.1 bits (79), Expect(3) = 9e-032
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2 / +2
Query: 894 DADVARMPYLQAVVKETLRAHPPGPLL 814
+ D A + YLQAVVKE +R HP P++
Sbjct: 104 EPDAASLQYLQAVVKEVMRLHPVAPIM 184
Score = 26.7 bits (52), Expect(3) = 9e-032
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2 / +2
Query: 969 VRHPAVQARVRAEVDAAVG 913
+RHP A+VRAE++ +G
Sbjct: 23 LRHPRAMAKVRAEMEDVLG 79
>gb|AU252316.1|AU252316 AU252316 salt-stressed barley root cDNA Hordeum vulgare subsp.
vulgare cDNA clone BR-C09 similar to putative cytochrome
P450, mRNA sequence
Length = 1066
Score = 62.9 bits (131), Expect(4) = 2e-031
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = -2 / +3
Query: 1080 EGDEKLGDDDMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEV 928
EGD L D ++ + E++ GTDTTA L EW MAELV HP VQA++ EV
Sbjct: 270 EGDRALTDAEITTLTAEVMVAGTDTTATLFEWIMAELVNHPDVQAKLYDEV 422
Score = 60.2 bits (125), Expect(4) = 2e-031
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = -2 / +3
Query: 624 DLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKT 445
++++ PFGAGRR+CPG +L + +V L+ FQW V + E L + +K
Sbjct: 711 EVKMMPFGAGRRLCPGYSLATLHLEYFVGTLIKEFQWLPAVQGQKVDMTEDLDTLIVLKD 890
Query: 444 PLVAAAIPRTA 412
PL A +PRT+
Sbjct: 891 PLRARLVPRTS 923
Score = 39.1 bits (79), Expect(4) = 2e-031
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +3
Query: 714 DAAVWADPDAFAPERFLPSEGGADVDVRG 628
D +VW +P F PERFL G VDV G
Sbjct: 618 DESVWTEPHEFRPERFLDGGEGCGVDVTG 704
Score = 30.4 bits (60), Expect(4) = 2e-031
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -2 / +3
Query: 942 VRAEVDAAVGAGGCPTDADVARMPYLQAVVKETLRAHPPGPLL 814
V+A++ V G + D+ M YL+AVV E +R HP L+
Sbjct: 396 VQAKLYDEVRGEGELKEGDLRGMRYLKAVVLEGMRMHPGAHLI 524
>gb|BE519743.1|BE519743 HV_CEb0021A21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021A21f, mRNA sequence
Length = 627
Score = 58.3 bits (121), Expect(3) = 6e-031
Identities = 26/76 (34%), Positives = 36/76 (47%)
Frame = -2 / +2
Query: 630 GVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEM 451
G D + PFG GRR+CPG L + L + L+H F+W LP +D K + +
Sbjct: 374 GQDFEMIPFGLGRRICPGMPLAQKLIPLILGTLLHRFEWELPADVKETGIDMTEKCGVVL 553
Query: 450 KTPLVAAAIPRTA*SV 403
AIP+ * V
Sbjct: 554 SLITPLTAIPKET*LV 601
Score = 58.3 bits (121), Expect(3) = 6e-031
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = -2 / +2
Query: 996 LTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVARMPYLQAVVKETLRAHPPGPL 817
L EW M +L+++P V +V+ E+ +G ++D+ R+PYLQAV KE LR PL
Sbjct: 14 LIEWGMVDLLQNPEVMRKVKEELTTVLGEKPLMEESDIGRLPYLQAVAKEILRLRMVVPL 193
Query: 816 L 814
+
Sbjct: 194 V 196
Score = 57.0 bits (118), Expect(3) = 6e-031
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -2 / +2
Query: 774 NGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFL 664
NG +P GT ++N WAI +A W+DPD F PERF+
Sbjct: 227 NGYRIPKGTNVILNAWAINRNADAWSDPDKFVPERFI 337
>gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. vulgare cDNA clone HB08M23
5-PRIME, mRNA sequence
Length = 624
Score = 77.1 bits (162), Expect(3) = 8e-031
Identities = 29/81 (35%), Positives = 43/81 (53%)
Frame = -2 / +2
Query: 780 LCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFG 601
+ NG +P+GT +VN AI D + W + F PERF+ A +D +G PFG
Sbjct: 377 IINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFG 556
Query: 600 AGRRVCPGKNLGLTTVGLWVA 538
RR+CPG N + + + +A
Sbjct: 557 TXRRICPGINFAIAAIEIMLA 619
Score = 54.2 bits (112), Expect(3) = 8e-031
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = -2 / +2
Query: 1125 ALNDNADFVDVLLSLEGDEKLGDDDMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQA 946
AL D+ D++ LLS++ + L + + A L M GTDT+ ++ E+ MA L+++P +
Sbjct: 35 ALGDDTDYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMT 214
Query: 945 RVRAEVDAAVGAG 907
+++AEV +++ G
Sbjct: 215 KLQAEVRSSIPKG 253
Score = 41.8 bits (85), Expect(3) = 8e-031
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -2 / +2
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLL 814
T+ D+ + YL+AV+KETLR H P PLL
Sbjct: 266 TEDDLNHLAYLKAVIKETLRLHMPAPLL 349
>gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 5', mRNA sequence
Length = 606
Score = 79.4 bits (167), Expect(3) = 8e-031
Identities = 30/81 (37%), Positives = 43/81 (53%)
Frame = -2 / +3
Query: 774 NGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAG 595
NG +P+GT +VN AI D + W + F PERF+ A +D +G PFG G
Sbjct: 360 NGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTG 539
Query: 594 RRVCPGKNLGLTTVGLWVARL 532
RR+CPG N + + + + L
Sbjct: 540 RRICPGINFXIAXIEIMLXNL 602
Score = 54.2 bits (112), Expect(3) = 8e-031
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = -2 / +3
Query: 1125 ALNDNADFVDVLLSLEGDEKLGDDDMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQA 946
AL D+ D++ LLS++ + L + + A L M GTDT+ ++ E+ MA L+++P +
Sbjct: 12 ALGDDTDYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMT 191
Query: 945 RVRAEVDAAVGAG 907
+++AEV +++ G
Sbjct: 192 KLQAEVRSSIPKG 230
Score = 39.6 bits (80), Expect(3) = 8e-031
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -2 / +3
Query: 888 DVARMPYLQAVVKETLRAHPPGPLL 814
D+ + YL+AV+KETLR H P PLL
Sbjct: 252 DLNHLAYLKAVIKETLRLHMPAPLL 326
>gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0012D18f, mRNA sequence
Length = 846
Score = 75.3 bits (158), Expect(3) = 1e-030
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = -2 / +2
Query: 1056 DDMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVAR 877
D +IL++ TDT+++ + W M EL+RHP V + +AEV AA G +D+ +
Sbjct: 143 DHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPK 322
Query: 876 MPYLQAVVKETLRAHPPGPLL 814
+ YL+ V+ ET R HPP +L
Sbjct: 323 LKYLRMVLSETFRMHPPATML 385
Score = 48.7 bits (100), Expect(3) = 1e-030
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -2 / +2
Query: 645 DVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDG 499
DVD G L PF AGRR+CP +G+ + L++ WA P G
Sbjct: 536 DVDFNGGHYELLPFXAGRRICPVLAMGVANTEFILXNLLYCLNWAPPSG 682
Score = 48.3 bits (99), Expect(3) = 1e-030
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = -2 / +2
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERF 667
G +PA T MVN WAI D A W DP+ F ERF
Sbjct: 422 GYDIPANTMLMVNAWAIGRDPASWKDPEVFYLERF 526
>gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5k12 3', mRNA sequence
Length = 774
Score = 112 bits (240), Expect(2) = 2e-030
Identities = 47/122 (38%), Positives = 66/122 (54%)
Frame = -2 / -3
Query: 780 LCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFG 601
+ +G +VPAGT +VN WAI D + W P+ F PERF ++ +G D + PFG
Sbjct: 481 IIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFG 302
Query: 600 AGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIP 421
AGRR+CPG NLG+ V L +A LV F W LP G +D L ++ +P
Sbjct: 301 AGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVP 122
Query: 420 RT 415
++
Sbjct: 121 KS 116
Score = 40.9 bits (83), Expect(2) = 2e-030
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -2 / -3
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLLS 811
++ D+ M YL+AV+KE+LR HP PLL+
Sbjct: 592 SETDMNNMTYLRAVIKESLRLHPVAPLLA 506
>gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11k15 3', mRNA sequence
Length = 707
Score = 112 bits (240), Expect(2) = 2e-030
Identities = 47/122 (38%), Positives = 66/122 (54%)
Frame = -2 / -2
Query: 780 LCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFG 601
+ +G +VPAGT +VN WAI D + W P+ F PERF ++ +G D + PFG
Sbjct: 472 IIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFG 293
Query: 600 AGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIP 421
AGRR+CPG NLG+ V L +A LV F W LP G +D L ++ +P
Sbjct: 292 AGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVP 113
Query: 420 RT 415
++
Sbjct: 112 KS 107
Score = 40.9 bits (83), Expect(2) = 2e-030
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -2 / -2
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLLS 811
++ D+ M YL+AV+KE+LR HP PLL+
Sbjct: 583 SETDMNNMTYLRAVIKESLRLHPVAPLLA 497
>gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40l11 3', mRNA sequence
Length = 696
Score = 112 bits (240), Expect(2) = 2e-030
Identities = 47/122 (38%), Positives = 66/122 (54%)
Frame = -2 / -1
Query: 780 LCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFG 601
+ +G +VPAGT +VN WAI D + W P+ F PERF ++ +G D + PFG
Sbjct: 465 IIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFG 286
Query: 600 AGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIP 421
AGRR+CPG NLG+ V L +A LV F W LP G +D L ++ +P
Sbjct: 285 AGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVP 106
Query: 420 RT 415
++
Sbjct: 105 KS 100
Score = 40.9 bits (83), Expect(2) = 2e-030
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -2 / -1
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLLS 811
++ D+ M YL+AV+KE+LR HP PLL+
Sbjct: 576 SETDMNNMTYLRAVIKESLRLHPVAPLLA 490
>gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15n22 3', mRNA sequence
Length = 684
Score = 112 bits (240), Expect(2) = 2e-030
Identities = 47/122 (38%), Positives = 66/122 (54%)
Frame = -2 / -3
Query: 780 LCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFG 601
+ +G +VPAGT +VN WAI D + W P+ F PERF ++ +G D + PFG
Sbjct: 451 IIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFG 272
Query: 600 AGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIP 421
AGRR+CPG NLG+ V L +A LV F W LP G +D L ++ +P
Sbjct: 271 AGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVP 92
Query: 420 RT 415
++
Sbjct: 91 KS 86
Score = 40.9 bits (83), Expect(2) = 2e-030
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -2 / -3
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLLS 811
++ D+ M YL+AV+KE+LR HP PLL+
Sbjct: 562 SETDMNNMTYLRAVIKESLRLHPVAPLLA 476
>gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 3', mRNA sequence
Length = 683
Score = 112 bits (240), Expect(2) = 2e-030
Identities = 47/122 (38%), Positives = 66/122 (54%)
Frame = -2 / -2
Query: 780 LCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFG 601
+ +G +VPAGT +VN WAI D + W P+ F PERF ++ +G D + PFG
Sbjct: 451 IIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFG 272
Query: 600 AGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIP 421
AGRR+CPG NLG+ V L +A LV F W LP G +D L ++ +P
Sbjct: 271 AGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVP 92
Query: 420 RT 415
++
Sbjct: 91 KS 86
Score = 40.9 bits (83), Expect(2) = 2e-030
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -2 / -2
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLLS 811
++ D+ M YL+AV+KE+LR HP PLL+
Sbjct: 562 SETDMNNMTYLRAVIKESLRLHPVAPLLA 476
>gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12i23 3', mRNA sequence
Length = 669
Score = 112 bits (240), Expect(2) = 2e-030
Identities = 47/122 (38%), Positives = 66/122 (54%)
Frame = -2 / -3
Query: 780 LCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFG 601
+ +G +VPAGT +VN WAI D + W P+ F PERF ++ +G D + PFG
Sbjct: 478 IIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFG 299
Query: 600 AGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIP 421
AGRR+CPG NLG+ V L +A LV F W LP G +D L ++ +P
Sbjct: 298 AGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVP 119
Query: 420 RT 415
++
Sbjct: 118 KS 113
Score = 40.9 bits (83), Expect(2) = 2e-030
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -2 / -3
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLLS 811
++ D+ M YL+AV+KE+LR HP PLL+
Sbjct: 589 SETDMNNMTYLRAVIKESLRLHPVAPLLA 503
>gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16j19 3', mRNA sequence
Length = 669
Score = 112 bits (240), Expect(2) = 2e-030
Identities = 47/122 (38%), Positives = 66/122 (54%)
Frame = -2 / -2
Query: 780 LCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFG 601
+ +G +VPAGT +VN WAI D + W P+ F PERF ++ +G D + PFG
Sbjct: 473 IIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFG 294
Query: 600 AGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIP 421
AGRR+CPG NLG+ V L +A LV F W LP G +D L ++ +P
Sbjct: 293 AGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVP 114
Query: 420 RT 415
++
Sbjct: 113 KS 108
Score = 40.9 bits (83), Expect(2) = 2e-030
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -2 / -2
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLLS 811
++ D+ M YL+AV+KE+LR HP PLL+
Sbjct: 584 SETDMNNMTYLRAVIKESLRLHPVAPLLA 498
>gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 3', mRNA sequence
Length = 668
Score = 112 bits (240), Expect(2) = 2e-030
Identities = 47/122 (38%), Positives = 66/122 (54%)
Frame = -2 / -1
Query: 780 LCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFG 601
+ +G +VPAGT +VN WAI D + W P+ F PERF ++ +G D + PFG
Sbjct: 473 IIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFG 294
Query: 600 AGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIP 421
AGRR+CPG NLG+ V L +A LV F W LP G +D L ++ +P
Sbjct: 293 AGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVP 114
Query: 420 RT 415
++
Sbjct: 113 KS 108
Score = 40.9 bits (83), Expect(2) = 2e-030
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -2 / -1
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLLS 811
++ D+ M YL+AV+KE+LR HP PLL+
Sbjct: 584 SETDMNNMTYLRAVIKESLRLHPVAPLLA 498
>gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24a03 3', mRNA sequence
Length = 645
Score = 112 bits (240), Expect(2) = 2e-030
Identities = 47/122 (38%), Positives = 66/122 (54%)
Frame = -2 / -2
Query: 780 LCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFG 601
+ +G +VPAGT +VN WAI D + W P+ F PERF ++ +G D + PFG
Sbjct: 452 IIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFG 273
Query: 600 AGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIP 421
AGRR+CPG NLG+ V L +A LV F W LP G +D L ++ +P
Sbjct: 272 AGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVP 93
Query: 420 RT 415
++
Sbjct: 92 KS 87
Score = 40.9 bits (83), Expect(2) = 2e-030
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -2 / -2
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLLS 811
++ D+ M YL+AV+KE+LR HP PLL+
Sbjct: 563 SETDMNNMTYLRAVIKESLRLHPVAPLLA 477
>gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3e02 3', mRNA sequence
Length = 597
Score = 112 bits (240), Expect(2) = 2e-030
Identities = 47/122 (38%), Positives = 66/122 (54%)
Frame = -2 / -3
Query: 780 LCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFG 601
+ +G +VPAGT +VN WAI D + W P+ F PERF ++ +G D + PFG
Sbjct: 472 IIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFG 293
Query: 600 AGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIP 421
AGRR+CPG NLG+ V L +A LV F W LP G +D L ++ +P
Sbjct: 292 AGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVP 113
Query: 420 RT 415
++
Sbjct: 112 KS 107
Score = 40.9 bits (83), Expect(2) = 2e-030
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -2 / -3
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLLS 811
++ D+ M YL+AV+KE+LR HP PLL+
Sbjct: 583 SETDMNNMTYLRAVIKESLRLHPVAPLLA 497
>gb|BF259778.3|BF259778 HVSMEf0020D20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020D20f, mRNA sequence
Length = 675
Score = 65.7 bits (137), Expect(3) = 4e-030
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = -2 / +1
Query: 645 DVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALP 505
+VD +G D L PFG+GRR+CPG L + V L +A L+H FQW LP
Sbjct: 256 EVDFKGRDFELLPFGSGRRMCPGTPLAVRIVHLMLASLLHRFQWRLP 396
Score = 59.7 bits (124), Expect(3) = 4e-030
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = -2 / +1
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSE 655
G VP GT +VN+WAI HD VW +P F PERFL E
Sbjct: 142 GYTVPKGTRLLVNVWAIGHDGKVWPEPXKFMPERFLEKE 258
Score = 45.5 bits (93), Expect(3) = 4e-030
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -2 / +1
Query: 894 DADVARMPYLQAVVKETLRAHPPGPLL 814
++D+ ++ YLQA+VKET R HPP P L
Sbjct: 25 ESDIGQLKYLQAIVKETFRLHPPAPFL 105
>gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22h15 3', mRNA sequence
Length = 640
Score = 111 bits (238), Expect(2) = 4e-030
Identities = 45/101 (44%), Positives = 59/101 (58%)
Frame = -2 / -1
Query: 780 LCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFG 601
+ +G +VPAGT +VN WAI D + W P+ F PERF ++ +G D + PFG
Sbjct: 385 IIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFG 206
Query: 600 AGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLD 478
AGRR+CPG NLG+ V L +A LV F W LP G +D
Sbjct: 205 AGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDID 83
Score = 40.9 bits (83), Expect(2) = 4e-030
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -2 / -1
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLLS 811
++ D+ M YL+AV+KE+LR HP PLL+
Sbjct: 496 SETDMNNMTYLRAVIKESLRLHPVAPLLA 410
>gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak43p03 5', mRNA sequence
Length = 589
Score = 105 bits (225), Expect(2) = 1e-029
Identities = 36/90 (40%), Positives = 52/90 (57%)
Frame = -2 / +2
Query: 774 NGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAG 595
NG ++P+G ++N WA+ D W D F PERF+ A +D +G D PFG G
Sbjct: 197 NGYIIPSGIRVIINSWALARDPGSWEHADEFMPERFMECGSAATMDYKGNDFSYLPFGTG 376
Query: 594 RRVCPGKNLGLTTVGLWVARLVHAFQWALP 505
RR+CPG N + T+ + +A L++ F W LP
Sbjct: 377 RRICPGINFAIATIEIMLANLIYHFNWKLP 466
Score = 45.5 bits (93), Expect(2) = 1e-029
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -2 / +2
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLL 814
T+AD+ YL+AV+KETLR H PGPLL
Sbjct: 80 TEADLDSXAYLKAVIKETLRLHMPGPLL 163
>gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27g14 5', mRNA sequence
Length = 528
Score = 75.3 bits (158), Expect(3) = 1e-029
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = -2 / +2
Query: 1056 DDMVAILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVAR 877
D +IL++ TDT+++ + W M EL+RHP V + +AEV AA G +D+ +
Sbjct: 62 DHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPK 241
Query: 876 MPYLQAVVKETLRAHPPGPLL 814
+ YL+ V+ ET R HPP +L
Sbjct: 242 LKYLRMVLSETFRMHPPATML 304
Score = 52.8 bits (109), Expect(3) = 1e-029
Identities = 20/35 (57%), Positives = 22/35 (62%)
Frame = -2 / +2
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERF 667
G +PA T MVN WAI D A W DP+ F PERF
Sbjct: 341 GYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERF 445
Score = 40.9 bits (83), Expect(3) = 1e-029
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / +2
Query: 645 DVDVRGVDLRLAPFGAGRRVCPG 577
DVD G L PFGAGRR+CPG
Sbjct: 455 DVDFNGGHYELLPFGAGRRICPG 523
>gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P450 monooxygenase
CYP71U4v2 mRNA, complete cds
Length = 1578
Score = 54.7 bits (113), Expect(5) = 2e-029
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = -2 / +1
Query: 633 RGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLD 478
+G + PFGAGRR CPG T + L +A L++ F WA+P G + +D
Sbjct: 1318 QGPHMEFVPFGAGRRQCPGALFATTMLELVLANLLYHFDWAIPGGESPETMD 1473
Score = 48.7 bits (100), Expect(5) = 2e-029
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -2 / +1
Query: 1044 AILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEV 928
A+++++ TDTTA EW MAELVR+P AR + EV
Sbjct: 913 AVIFDIFSAATDTTAATLEWAMAELVRNPRAMARAKLEV 1029
Score = 46.0 bits (94), Expect(5) = 2e-029
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = -2 / +1
Query: 1596 ARAIGFAPNGEYWRRLRRVASTHLFSPRRVASHEPGRQGDAEAMLRSIAAEQSAS 1432
+ I FAP GE+WR++R+V L S +V + Q + +L S+AA SAS
Sbjct: 346 SEGIIFAPYGEHWRQMRKVCVVELLSAMQVRRIQSIMQAEIAHLLESVAAASSAS 510
Score = 42.3 bits (86), Expect(5) = 2e-029
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -2 / +1
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLL 814
T AD+A + YL+ V+KETLR HP PL+
Sbjct: 1066 TSADLAGLHYLRMVIKETLRLHPSAPLI 1149
Score = 24.9 bits (48), Expect(5) = 2e-029
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3 / +2
Query: 2012 RGGCTRSRRCSAPTPCAPTRPSW 1944
R C SR ++P+P P P W
Sbjct: 260 RRRCWCSRPTTSPSPPVPAAPRW 328
>gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20j07 3', mRNA sequence
Length = 660
Score = 104 bits (221), Expect(2) = 4e-029
Identities = 38/95 (40%), Positives = 55/95 (57%)
Frame = -2 / -3
Query: 789 DVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLA 610
D + NG +P+GT +N +AI D + W P+ F PERF+ A +D +G D +
Sbjct: 463 DECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYF 284
Query: 609 PFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALP 505
PFG+GRR+CPG N T+ L + L++ F W LP
Sbjct: 283 PFGSGRRICPGINFATATIQLMLTNLMYHFDWKLP 179
Score = 45.5 bits (93), Expect(2) = 4e-029
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = -2 / -3
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLL 814
T D+ +PYL+AV+KETLR H PGPL+
Sbjct: 565 TQDDLHGLPYLKAVIKETLRLHMPGPLM 482
>gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 3', mRNA sequence
Length = 655
Score = 104 bits (221), Expect(2) = 4e-029
Identities = 38/95 (40%), Positives = 55/95 (57%)
Frame = -2 / -2
Query: 789 DVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLA 610
D + NG +P+GT +N +AI D + W P+ F PERF+ A +D +G D +
Sbjct: 498 DECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYF 319
Query: 609 PFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALP 505
PFG+GRR+CPG N T+ L + L++ F W LP
Sbjct: 318 PFGSGRRICPGINFATATIQLMLTNLMYHFDWKLP 214
Score = 45.5 bits (93), Expect(2) = 4e-029
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = -2 / -2
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLL 814
T D+ +PYL+AV+KETLR H PGPL+
Sbjct: 600 TQDDLHGLPYLKAVIKETLRLHMPGPLM 517
>gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b09 3', mRNA sequence
Length = 618
Score = 104 bits (221), Expect(2) = 4e-029
Identities = 38/95 (40%), Positives = 55/95 (57%)
Frame = -2 / -3
Query: 789 DVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLA 610
D + NG +P+GT +N +AI D + W P+ F PERF+ A +D +G D +
Sbjct: 499 DECIINGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYF 320
Query: 609 PFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALP 505
PFG+GRR+CPG N T+ L + L++ F W LP
Sbjct: 319 PFGSGRRICPGINFATATIQLMLTNLMYHFDWKLP 215
Score = 45.5 bits (93), Expect(2) = 4e-029
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = -2 / -3
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLL 814
T D+ +PYL+AV+KETLR H PGPL+
Sbjct: 601 TQDDLHGLPYLKAVIKETLRLHMPGPLM 518
>gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33l17 3', mRNA sequence
Length = 689
Score = 111 bits (238), Expect(2) = 5e-029
Identities = 45/101 (44%), Positives = 59/101 (58%)
Frame = -2 / -1
Query: 780 LCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFG 601
+ +G +VPAGT +VN WAI D + W P+ F PERF ++ +G D + PFG
Sbjct: 395 IIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFG 216
Query: 600 AGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLD 478
AGRR+CPG NLG+ V L +A LV F W LP G +D
Sbjct: 215 AGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDID 93
Score = 37.3 bits (75), Expect(2) = 5e-029
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -2 / -1
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLLS 811
++ D+ M YL+AV+KE+LR P PLL+
Sbjct: 506 SETDMNNMTYLRAVIKESLRLRPVAPLLA 420
>gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42e08 3', mRNA sequence
Length = 594
Score = 111 bits (238), Expect(2) = 5e-029
Identities = 45/101 (44%), Positives = 59/101 (58%)
Frame = -2 / -1
Query: 780 LCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFG 601
+ +G +VPAGT +VN WAI D + W P+ F PERF ++ +G D + PFG
Sbjct: 399 IIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFG 220
Query: 600 AGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLD 478
AGRR+CPG NLG+ V L +A LV F W LP G +D
Sbjct: 219 AGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDID 97
Score = 37.3 bits (75), Expect(2) = 5e-029
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -2 / -1
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLLS 811
++ D+ M YL+AV+KE+LR P PLL+
Sbjct: 510 SETDMNNMTYLRAVIKESLRLRPVAPLLA 424
>gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38d04 3', mRNA sequence
Length = 552
Score = 112 bits (240), Expect(2) = 1e-028
Identities = 47/122 (38%), Positives = 66/122 (54%)
Frame = -2 / -1
Query: 780 LCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFG 601
+ +G +VPAGT +VN WAI D + W P+ F PERF ++ +G D + PFG
Sbjct: 456 IIDGYIVPAGTRVVVNAWAIGRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFG 277
Query: 600 AGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIP 421
AGRR+CPG NLG+ V L +A LV F W LP G +D L ++ +P
Sbjct: 276 AGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEVFGLTVRRKEKLLLVP 97
Query: 420 RT 415
++
Sbjct: 96 KS 91
Score = 35.0 bits (70), Expect(2) = 1e-028
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -2 / -1
Query: 876 MPYLQAVVKETLRAHPPGPLLS 811
M YL+ V+KE+LR HP PLL+
Sbjct: 546 MXYLRXVIKESLRLHPVAPLLA 481
>emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for putative cytochrome P450
Length = 1790
Score = 55.1 bits (114), Expect(5) = 2e-028
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = -2 / +2
Query: 633 RGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLD 478
+G + PFGAGRR CPG T + L +A L++ F WA+P G + +D
Sbjct: 1382 QGPHMEFVPFGAGRRQCPGALFATTMLELVLANLLYHFDWAIPGGESPEAMD 1537
Score = 46.0 bits (94), Expect(5) = 2e-028
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -2 / +2
Query: 1044 AILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEV 928
A+++++ TDTTA EW MAELV +P AR + EV
Sbjct: 977 AVIFDIFSAATDTTAATLEWAMAELVXNPQAMARAKLEV 1093
Score = 46.0 bits (94), Expect(5) = 2e-028
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = -2 / +2
Query: 1596 ARAIGFAPNGEYWRRLRRVASTHLFSPRRVASHEPGRQGDAEAMLRSIAAEQSAS 1432
+ I FAP GE+WR++R+V L S +V + Q + +L S+AA SAS
Sbjct: 410 SEGIIFAPYGEHWRQMRKVCVVELLSAMQVRRIQSIMQAEIAHLLESVAAASSAS 574
Score = 42.3 bits (86), Expect(5) = 2e-028
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = -2 / +2
Query: 897 TDADVARMPYLQAVVKETLRAHPPGPLL 814
T AD+A + YL+ V+KETLR HP PL+
Sbjct: 1130 TSADLAGLHYLRMVIKETLRLHPSAPLI 1213
Score = 24.9 bits (48), Expect(5) = 2e-028
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3 / +3
Query: 2012 RGGCTRSRRCSAPTPCAPTRPSW 1944
R C SR ++P+P P P W
Sbjct: 324 RRRCWCSRPTTSPSPPVPAAPRW 392
>gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak45m01 5', mRNA sequence
Length = 603
Score = 73.0 bits (153), Expect(3) = 2e-028
Identities = 29/77 (37%), Positives = 49/77 (63%)
Frame = -2 / +3
Query: 1044 AILWEMVFRGTDTTALLTEWCMAELVRHPAVQARVRAEVDAAVGAGGCPTDADVARMPYL 865
A++ ++ G++T+A +W M+EL+R+P V + +AEV + T+ D+A + YL
Sbjct: 141 AVILDLFGAGSETSATTLQWAMSELMRYPNVMLKAQAEVRNNLQGKSKVTEDDLANLKYL 320
Query: 864 QAVVKETLRAHPPGPLL 814
+ V+KET+R HP PLL
Sbjct: 321 RLVIKETMRLHPAAPLL 371
Score = 53.3 bits (110), Expect(3) = 2e-028
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -2 / +3
Query: 771 GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERF 667
G +P GTT +VN WAI D W DP+ F PERF
Sbjct: 408 GYDIPEGTTVLVNAWAIGRDPKYWQDPEEFKPERF 512
Score = 38.6 bits (78), Expect(3) = 2e-028
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2 / +3
Query: 642 VDVRGVDLRLAPFGAGRRVCPG 577
VD +G + PFGAGRR+CPG
Sbjct: 525 VDFKGTNFEYIPFGAGRRMCPG 590
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,001,907,473
Number of Sequences: 312970
Number of extensions: 20516727
Number of successful extensions: 369069
Number of sequences better than 1.0e-020: 145
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 26794658154
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)