TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521459.2.1
(892 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF260956.1|BF260956 HVSMEf0023G04f Hordeum vulgare seedl... 338 3e-092
gb|BE060120.2|BE060120 HVSMEg0011I12f Hordeum vulgare pre-a... 329 2e-089
gb|BG415849.1|BG415849 HVSMEk0008C14f Hordeum vulgare testa... 301 5e-082
gb|AV912784.1|AV912784 AV912784 K. Sato unpublished cDNA li... 258 1e-071
gb|AV915960.1|AV915960 AV915960 K. Sato unpublished cDNA li... 248 1e-071
gb|BF631171.2|BF631171 HVSMEb0015C20f Hordeum vulgare seedl... 251 5e-066
gb|BE455736.3|BE455736 HVSMEg0019G20f Hordeum vulgare pre-a... 220 3e-064
gb|BE216096.1|BE216096 HV_CEb0009G14f Hordeum vulgare seedl... 208 4e-053
gb|BI960271.1|BI960271 HVSMEn0024A19f Hordeum vulgare rachi... 172 2e-042
gb|BF623318.1|BF623318 HVSMEa0015G04f Hordeum vulgare seedl... 141 1e-036
gb|BG415342.2|BG415342 HVSMEk0006B21f Hordeum vulgare testa... 149 2e-035
gb|BG309831.1|BG309831 HVSMEc0013A09f Hordeum vulgare seedl... 121 1e-032
gb|BF623091.2|BF623091 HVSMEa0014D14f Hordeum vulgare seedl... 120 5e-032
gb|AV917519.1|AV917519 AV917519 K. Sato unpublished cDNA li... 83 4e-029
>gb|BF260956.1|BF260956 HVSMEf0023G04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023G04f, mRNA sequence
Length = 746
Score = 338 bits (732), Expect = 3e-092
Identities = 134/170 (78%), Positives = 156/170 (91%)
Frame = +2 / +1
Query: 167 GPAPRNKGLRAANNSATPIAKVERVDRSDILTLDSIRQVLIRLEDSIIFGLLERAQFCYN 346
GP+ + + L AA+N++ P+ + +R+DRS ILTLDSIR LIRLEDSIIFGLLERAQ+CYN
Sbjct: 235 GPSRQARALAAASNNSAPLVEEQRIDRSQILTLDSIRTSLIRLEDSIIFGLLERAQYCYN 414
Query: 347 ADTYDSNAFHMDGFGGSLVEYIVRETEKLHAQVGRYKSPDEHPFFSKDLPEPRLPPMQYP 526
ADTYDS++FH+DGFGGSLVE++VRETEKLHA+VGRYKSPDEHPFF +DLPE LPP+QYP
Sbjct: 415 ADTYDSSSFHVDGFGGSLVEFMVRETEKLHAKVGRYKSPDEHPFFPEDLPETLLPPIQYP 594
Query: 527 RVLHPIADSININKEIWKMYFDELLPRLVKEGSDGNAGSSALCDTTCLQA 676
VLHPIADSININKEIWKMYFDE++PRLVKEGSDGN+GSSALCDTTCLQA
Sbjct: 595 TVLHPIADSININKEIWKMYFDEVIPRLVKEGSDGNSGSSALCDTTCLQA 744
Score = 266 bits (575), Expect = 1e-070
Identities = 124/171 (72%), Positives = 135/171 (78%)
Frame = -2 / -1
Query: 678 SACKQVVSQRALDPALPSLPSFTNLGRSSSKYIFQISLLILIESAMGCKTLGYCIGGNRG 499
SACKQVVSQRALDP PSLPSFTNLG +SSKYIFQISLLIL+ESA+GC+T+GY IGGN
Sbjct: 746 SACKQVVSQRALDPEFPSLPSFTNLGITSSKYIFQISLLILMESAIGCRTVGYWIGGNSV 567
Query: 498 SGRSLEKKGCSSGLLYLPTCAWSFSVSLTIYSTKDPPKPSMWKALLSYVSAL*QNCALSK 319
SGRS K GCSSGLLYLPT A SFSVSLT+ STK+PP PS WK LLSYVSAL*Q CALSK
Sbjct: 566 SGRSSGKNGCSSGLLYLPTFACSFSVSLTMNSTKEPPNPSTWKELLSYVSAL*QYCALSK 387
Query: 318 RPNMMLSSSLIKTCLMLSNVNMSLRSTLSTLAMGVAELLAARSPLFLGAGP 166
RPNMMLSSSLIK L+LS V++ LRS L + G L AA S GP
Sbjct: 386 RPNMMLSSSLIKEVLILSKVSI*LRSILCSSTSGAELLDAAASARACRDGP 234
Score = 222 bits (480), Expect = 2e-057
Identities = 102/147 (69%), Positives = 108/147 (73%)
Frame = +3 / +2
Query: 237 GLIEVTY*HWIASDKF*LD*KTASYLAFWREHSFVTMLIHMIAMLSTWMVLEDLWLNI*L 416
G IEV Y* W S+ * D*KTASY WREHS VTMLI MIA+LS WM L LWLN L
Sbjct: 305 G*IEVKY*LWTVSEPL*SD*KTASYSVSWREHSIVTMLIRMIAVLSMWMDLGALWLNSWL 484
Query: 417 EKLKSSMHRLGDTRAQMSTLSFPRICLSPGCHLCNTQGFCIPLLILSISTKRFGKCILMN 596
EKLKS RLGDTRAQMST SF +ICL C L + Q FCI LLI ISTKRFGKC LM
Sbjct: 485 EKLKSYTQRLGDTRAQMSTHSFQKICLRHCCRLSSIQRFCILLLIPLISTKRFGKCTLMK 664
Query: 597 FFQDW*KKEVMVMLDPVLFVTQPACRH 677
FQ W*KKEVM +LDPVLFVT+PACRH
Sbjct: 665 LFQGW*KKEVMEILDPVLFVTRPACRH 745
Score = 222 bits (479), Expect = 2e-057
Identities = 107/168 (63%), Positives = 119/168 (70%)
Frame = +1 / +3
Query: 175 AQEQGAPRGQQLRNAHS*GREG*SK*HIDIG*HQTSFD*TRRQHHIWPFGESTVLLQC*Y 354
A GA R Q G E SK + D G +Q FD TRRQHHI GESTVLLQC*Y
Sbjct: 243 AASAGAGRCIQQLRPAGGGTEDRSKSNTDFGQYQNLFDQTRRQHHIRSLGESTVLLQC*Y 422
Query: 355 I**QCFPHGWFWRIFG*IYS*RN*KAPCTGWEIQEPR*APFLFQGSA*APVATYAIPKGF 534
+**Q FP GW W +FG*I+ *RN*KA GWEIQEPR*AP L + SA* VA Y + G
Sbjct: 423 V**QFFPCGWIWGLFG*IHG*RN*KATRKGWEIQEPR*APILSRRSA*DTVAAYPVSNGS 602
Query: 535 ASHC*FYQYQQRDLENVF**TSSKIGERRK*W*CWIQCSL*HNLLAGT 678
AS+C*F+ YQQRDLENV **+ SK+GERRK*W WIQCSL*H+LLAGT
Sbjct: 603 ASYC*FH*YQQRDLENVL**SYSKVGERRK*WKFWIQCSL*HDLLAGT 746
Score = 222 bits (479), Expect = 2e-057
Identities = 98/150 (65%), Positives = 112/150 (74%)
Frame = -1 / -3
Query: 676 CLQAGCVXXXXXXXXXXXSFFHQSWKKFIKIHFPNLFVDIDRISNGMQNPWVLHRWQPGL 497
CLQAG V SFFHQ W FIK+HFPNLFVDI+ ISN MQN W+L R Q L
Sbjct: 744 CLQAGRVTKSTGSRISITSFFHQPWNNFIKVHFPNLFVDINGISNRMQNRWILDRRQQCL 565
Query: 496 RQILGKERVLIWALVSPNLCMELFSFSNYIFNQRSSKTIHVESIAIICISIVTKLCSLQK 317
RQI KE VLIWALVSPNLC+ LFSFSN+ FNQR+ K+IH+E AII ISIVT LCSLQ+
Sbjct: 564 RQIFWKEWVLIWALVSPNLCV*LFSFSNHEFNQRAPKSIHMERTAIIRISIVTILCSLQE 385
Query: 316 AKYDAVF*SNQNLSDAIQCQYVTSINPLYL 227
+YDAVF*S+Q SD +Q QY+TSI PL+L
Sbjct: 384 TEYDAVF*SDQRGSDTVQSQYLTSIYPLFL 295
Score = 207 bits (447), Expect = 6e-053
Identities = 89/124 (71%), Positives = 100/124 (80%)
Frame = -3 / -2
Query: 677 VPASRLCHKEHWIQHYHHFLLSPILEEVHQNTFSKSLC*Y**NQQWDAKPLGIA*VATGA 498
VPASR CHKEHWIQ++HHFLLSP LE +HQ+TFSKSLC*Y* NQQ DA+PL * AT +
Sbjct: 745 VPASRSCHKEHWIQNFHHFLLSPTLE*LHQSTFSKSLC*Y*WNQQ*DAEPLDTG*AATVS 566
Query: 497 QADPWKRKGAHLGSCISQPVHGAFQFL*LYIQPKILQNHPCGKHCYHMYQHCNKTVLSPK 318
QAD +R GAHLGSCISQP+ AFQFL* IQPK Q HP GK+CYH YQHCN TVLSP+
Sbjct: 565 QADLLERMGAHLGSCISQPLRVAFQFL*P*IQPKSPQIHPHGKNCYHTYQHCNNTVLSPR 386
Query: 317 GQI* 306
+I*
Sbjct: 385 DRI* 374
>gb|BE060120.2|BE060120 HVSMEg0011I12f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011I12f, mRNA sequence
Length = 592
Score = 329 bits (712), Expect = 2e-089
Identities = 137/172 (79%), Positives = 151/172 (87%)
Frame = +2 / +3
Query: 254 ILTLDSIRQVLIRLEDSIIFGLLERAQFCYNADTYDSNAFHMDGFGGSLVEYIVRETEKL 433
ILTLDSIR LIRLEDSIIFGLLERAQ+CYNADTYDS++FH+DGFGGSLVE++VRETEKL
Sbjct: 6 ILTLDSIRTSLIRLEDSIIFGLLERAQYCYNADTYDSSSFHVDGFGGSLVEFMVRETEKL 185
Query: 434 HAQVGRYKSPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELLPRLV 613
HA+VGRYKSPDEHPFF +DLPE LPP+QYP VLHPIADSININKEIWKMYFDE++ RLV
Sbjct: 186 HAKVGRYKSPDEHPFFPEDLPETLLPPIQYPTVLHPIADSININKEIWKMYFDEVISRLV 365
Query: 614 KEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQG 769
KE SDGN+ SALCDTTCLQAL +R KFVA AKFQE PEAYTP + G
Sbjct: 366 KERSDGNS*FSALCDTTCLQALFKRNPLWKFVAXAKFQEVPEAYTPCNKSSG 521
Score = 270 bits (585), Expect = 6e-072
Identities = 126/172 (73%), Positives = 140/172 (81%)
Frame = -2 / -1
Query: 768 PWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSSS 589
P ++ GV*ASG S*NLA ATNF LL+ ACKQVVSQRAL+ PSL SFTNL +SS
Sbjct: 520 PELLLQGV*ASGTS*NLAXATNFHSGFLLKRACKQVVSQRALNQEFPSLLSFTNLEITSS 341
Query: 588 KYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGLLYLPTCAWSFSVSLTI 409
KYIFQISLLIL+ESA+GC+T+GY IGGN SGRS K GCSSGLLYLPT A SFSVSLT+
Sbjct: 340 KYIFQISLLILMESAIGCRTVGYWIGGNSVSGRSSGKNGCSSGLLYLPTFACSFSVSLTM 161
Query: 408 YSTKDPPKPSMWKALLSYVSAL*QNCALSKRPNMMLSSSLIKTCLMLSNVNM 253
STK+PP PS WK LLSYVSAL*Q CALSKRPNMMLSSSLIK L+LS V++
Sbjct: 160 NSTKEPPNPSTWKELLSYVSAL*QYCALSKRPNMMLSSSLIKEVLILSKVSI 5
Score = 237 bits (512), Expect = 7e-062
Identities = 111/166 (66%), Positives = 118/166 (71%)
Frame = +3 / +1
Query: 249 VTY*HWIASDKF*LD*KTASYLAFWREHSFVTMLIHMIAMLSTWMVLEDLWLNI*LEKLK 428
V Y* W S+ * D*KTASY WREHS VTMLI MIA+LS WM L LWLN LEKLK
Sbjct: 1 VKY*LWTVSEPL*SD*KTASYSVSWREHSIVTMLIRMIAVLSMWMDLGALWLNSWLEKLK 180
Query: 429 SSMHRLGDTRAQMSTLSFPRICLSPGCHLCNTQGFCIPLLILSISTKRFGKCILMNFFQD 608
S RLGDTRAQMST SF +ICL C L + Q FCI LLI ISTKRFGKC LM FQ
Sbjct: 181 SYTQRLGDTRAQMSTHSFQKICLRHCCRLSSIQRFCILLLIPLISTKRFGKCTLMKLFQG 360
Query: 609 W*KKEVMVMLDPVLFVTQPACRHSPEGSTMGSLWQRPSFKSPLKLT 746
W*KKEVM +LD VLFVT+PACR S + GSLW RPSFK LKLT
Sbjct: 361 W*KKEVMGILDSVLFVTRPACRPSLKEIHYGSLWXRPSFKRSLKLT 498
Score = 235 bits (507), Expect = 3e-061
Identities = 110/163 (67%), Positives = 122/163 (74%)
Frame = +1 / +2
Query: 259 DIG*HQTSFD*TRRQHHIWPFGESTVLLQC*YI**QCFPHGWFWRIFG*IYS*RN*KAPC 438
D G +Q FD TRRQHHI GESTVLLQC*Y+**Q FP GW W +FG*I+ *RN*KA
Sbjct: 11 DFGQYQNLFDQTRRQHHIRSLGESTVLLQC*YV**QFFPCGWIWGLFG*IHG*RN*KATR 190
Query: 439 TGWEIQEPR*APFLFQGSA*APVATYAIPKGFASHC*FYQYQQRDLENVF**TSSKIGER 618
GWEIQEPR*AP L + SA* VA Y + G AS+C*F+ YQQRDLENV **+ K+GER
Sbjct: 191 KGWEIQEPR*APILSRRSA*DTVAAYPVSNGSASYC*FH*YQQRDLENVL**SYFKVGER 370
Query: 619 RK*W*CWIQCSL*HNLLAGTLQKDPLWEVCGRGQVSRVP*SLH 747
+K*W IQCSL*H+LLAG L K EVCG GQVSR P*SLH
Sbjct: 371 KK*WEFLIQCSL*HDLLAGPL*KKSTMEVCGXGQVSRGP*SLH 499
Score = 226 bits (489), Expect = 1e-058
Identities = 106/165 (64%), Positives = 119/165 (72%)
Frame = -1 / -3
Query: 745 VSFRGLLKLGLCHKLPIVDPSGECLQAGCVXXXXXXXXXXXSFFHQSWKKFIKIHFPNLF 566
VSFR LLKLGLCHKLP E LQAG V SFFHQ FIK+HFPNLF
Sbjct: 497 VSFRDLLKLGLCHKLP*WISFKEGLQAGRVTKSTESRIPITSFFHQP*NNFIKVHFPNLF 318
Query: 565 VDIDRISNGMQNPWVLHRWQPGLRQILGKERVLIWALVSPNLCMELFSFSNYIFNQRSSK 386
VDI+ ISN MQN W+L R Q LRQI KE VLIWALVSPNLC+ LFSFSN+ FNQR+ K
Sbjct: 317 VDINGISNRMQNRWILDRRQQCLRQIFWKEWVLIWALVSPNLCV*LFSFSNHEFNQRAPK 138
Query: 385 TIHVESIAIICISIVTKLCSLQKAKYDAVF*SNQNLSDAIQCQYV 251
+IH+E AII ISIVT LCSLQ+ +YDAVF*S+Q SD +Q QY+
Sbjct: 137 SIHMERTAIIRISIVTILCSLQETEYDAVF*SDQRGSDTVQSQYL 3
Score = 217 bits (469), Expect = 6e-056
Identities = 97/144 (67%), Positives = 109/144 (75%)
Frame = -3 / -2
Query: 737 QGTLETWPLPQTSHSGSFWRVPASRLCHKEHWIQHYHHFLLSPILEEVHQNTFSKSLC*Y 558
QG LETWP PQTS F R PASR CHKEH I++ HHF LSP L+ +HQ+TFSKSLC*Y
Sbjct: 489 QGPLETWPXPQTSIVDFF*RGPASRSCHKEH*IKNSHHFFLSPTLK*LHQSTFSKSLC*Y 310
Query: 557 **NQQWDAKPLGIA*VATGAQADPWKRKGAHLGSCISQPVHGAFQFL*LYIQPKILQNHP 378
* NQQ DA+PL * AT +QAD +R GAHLGSCISQP+ AFQFL* IQPK Q HP
Sbjct: 309 *WNQQ*DAEPLDTG*AATVSQADLLERMGAHLGSCISQPLRVAFQFL*P*IQPKSPQIHP 130
Query: 377 CGKHCYHMYQHCNKTVLSPKGQI* 306
GK+CYH YQHCN TVLSP+ +I*
Sbjct: 129 HGKNCYHTYQHCNNTVLSPRDRI* 58
>gb|BG415849.1|BG415849 HVSMEk0008C14f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0008C14f, mRNA sequence
Length = 660
Score = 301 bits (651), Expect(2) = 5e-082
Identities = 123/186 (66%), Positives = 146/186 (78%)
Frame = +2 / +1
Query: 233 ERVDRSDILTLDSIRQVLIRLEDSIIFGLLERAQFCYNADTYDSNAFHMDGFGGSLVEYI 412
+R+DRS ILTLDSI IRL+DS IFGLLERAQFCY ADTYDS++FH+DG GGSLVEY+
Sbjct: 4 QRIDRSQILTLDSITTSWIRLQDSFIFGLLERAQFCYKADTYDSSSFHVDGSGGSLVEYM 183
Query: 413 VRETEKLHAQVGRYKSPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFD 592
VRE E LH +VGRYKSP EHPFF +DLP+ PP+Q+ VLHPIADS+NIN++IWKM +D
Sbjct: 184 VREPETLHPRVGRYKSPYEHPFFPEDLPDTLWPPIQHTAVLHPIADSLNINRQIWKMSYD 363
Query: 593 ELLPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQGG 772
E++PRL KEGS+GN GSSALCDTTCLQ L + I YG A+A E P+AYTP I + G
Sbjct: 364 EVIPRLAKEGSEGNGGSSALCDTTCLQVLYKTIPYGTSAAQANS*EPPDAYTPGIKPEDG 543
Query: 773 GQSQDL 790
Q L
Sbjct: 544 EQLMQL 561
Score = 238 bits (515), Expect(2) = 1e-064
Identities = 116/179 (64%), Positives = 130/179 (72%)
Frame = -2 / -2
Query: 771 PPWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSS 592
P + GV*ASG S* LA A + P* I+L CKQVVS +ALDP PSLPSF NLG +S
Sbjct: 542 PSSGFIPGV*ASGGS*ELACAADVP*GIVL*RTCKQVVSHKALDPPFPSLPSFANLGITS 363
Query: 591 SKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGLLYLPTCAWSFSVSLT 412
S IFQI LLIL ESA+GC+T IGG+ SGRS K GCS GLLYLPT S S SLT
Sbjct: 362 S*DIFQICLLILRESAIGCRTAVCWIGGHSVSGRSSGKNGCSYGLLYLPTLGCSVSGSLT 183
Query: 411 IYSTKDPPKPSMWKALLSYVSAL*QNCALSKRPNMMLSSSLIKTCLMLSNVNMSLRSTL 235
+YSTK+PP PS WK LLSYVSAL*QNCALSKRPNM LS SLI+ ++LS V + LRS L
Sbjct: 182 MYSTKEPPDPSTWKELLSYVSAL*QNCALSKRPNMKLSCSLIQEVVILSKVRI*LRSIL 6
Score = 210 bits (452), Expect = 1e-053
Identities = 91/144 (63%), Positives = 104/144 (72%)
Frame = -3 / -3
Query: 737 QGTLETWPLPQTSHSGSFWRVPASRLCHKEHWIQHYHHFLLSPILEEVHQNTFSKSLC*Y 558
QG L+ WP+PQTSH G F+R PASR C +HWI H+ HFLLSP LE +H TFSKS C*Y
Sbjct: 508 QGALKNWPVPQTSHRGLFYRGPASRWCRTKHWIHHFPHFLLSPTLE*LHHRTFSKSAC*Y 329
Query: 557 **NQQWDAKPLGIA*VATGAQADPWKRKGAHLGSCISQPVHGAFQFL*LYIQPKILQNHP 378
* NQQ DA+PL * AT QAD +R GAH+GSCIS P+ AFQ L* I PK Q HP
Sbjct: 328 *GNQQ*DAEPLYAG*AATVYQADLLERMGAHMGSCISPPLGVAFQVL*PCIPPKSPQIHP 149
Query: 377 CGKHCYHMYQHCNKTVLSPKGQI* 306
GK+CYH YQ CNKTVLSP+ +I*
Sbjct: 148 HGKNCYHTYQPCNKTVLSPRDRI* 77
Score = 195 bits (421), Expect = 2e-049
Identities = 98/170 (57%), Positives = 104/170 (61%)
Frame = +3 / +2
Query: 237 GLIEVTY*HWIASDKF*LD*KTASYLAFWREHSFVTMLIHMIAMLSTWMVLEDLWLNI*L 416
G IEV * W S D KTASY WREHSFVT LI MIA+LS WM L LW N L
Sbjct: 8 G*IEVKS*LWTVSQPLGSDYKTASYSVSWREHSFVTRLIRMIAVLSMWMDLGALWWNTWL 187
Query: 417 EKLKSSMHRLGDTRAQMSTLSFPRICLSPGCHLCNTQGFCIPLLILSISTKRFGKCILMN 596
E LK GDTRA MST SF +ICL L + Q FCI LLI IST RFGKC +M
Sbjct: 188 ENLKRYTQGWGDTRAHMSTHSFQKICLIHCGRLSSIQRFCILLLIPLISTGRFGKCPMMK 367
Query: 597 FFQDW*KKEVMVMLDPVLFVTQPACRHSPEGSTMGSLWQRPSFKSPLKLT 746
FQ W KKEV M+DPVL T PACR S + S MG L RP KSPL LT
Sbjct: 368 LFQGWRKKEVREMVDPVLCATPPACRSSIKQSPMGRLRHRPILKSPLMLT 517
Score = 193 bits (417), Expect = 8e-049
Identities = 98/168 (58%), Positives = 111/168 (66%)
Frame = +1 / +3
Query: 244 SK*HIDIG*HQTSFD*TRRQHHIWPFGESTVLLQC*YI**QCFPHGWFWRIFG*IYS*RN 423
SK + D G + D T RQ HI GESTVLLQ *Y+**Q FP GW W +FG I+ *R
Sbjct: 15 SKSNPDFGQYHNLLDQTTRQLHIRSLGESTVLLQG*YV**QFFPCGWIWGLFGGIHG*RT 194
Query: 424 *KAPCTGWEIQEPR*APFLFQGSA*APVATYAIPKGFASHC*FYQYQQRDLENVF**TSS 603
* A G EIQEP *AP L + SA* VA Y G AS+C*F YQQ DLENV **+ S
Sbjct: 195 *NATPKGGEIQEPI*APILSRRSA*YTVAAYPAYSGSASYC*FP*YQQADLENVL**SYS 374
Query: 604 KIGERRK*W*CWIQCSL*HNLLAGTLQKDPLWEVCGRGQVSRVP*SLH 747
K+GERRK* WIQC + H+LLAG L +PLW+VCG GQ R P* LH
Sbjct: 375 KVGERRK*GKWWIQCFVRHHLLAGPL*NNPLWDVCGTGQFLRAP*CLH 518
Score = 192 bits (413), Expect = 3e-048
Identities = 94/183 (51%), Positives = 118/183 (64%)
Frame = -1 / -1
Query: 778 LASTLGYYGWRVSFRGLLKLGLCHKLPIVDPSGECLQAGCVXXXXXXXXXXXSFFHQSWK 599
L + L +Y VS RGLL++GLC + PI D E LQAG V SFF Q W
Sbjct: 549 LLTVLRFYPRCVSIRGLLRIGLCRRRPIGDCFIEDLQAGGVAQSTGSTISLTSFFRQPWN 370
Query: 598 KFIKIHFPNLFVDIDRISNGMQNPWVLHRWQPGLRQILGKERVLIWALVSPNLCMELFSF 419
FI HFPNL VDI ISN MQN +L R +RQI KE VLIWALVSP+ + F F
Sbjct: 369 NFIIGHFPNLPVDIKGISNRMQNRCMLDRRPQCIRQIFWKEWVLIWALVSPHPWV*RFRF 190
Query: 418 SNYIFNQRSSKTIHVESIAIICISIVTKLCSLQKAKYDAVF*SNQNLSDAIQCQYVTSIN 239
SN++F+QR+ ++IH+E AII IS+VTKLCSLQ+ +Y+AV *S+ D +Q Q +TSI
Sbjct: 189 SNHVFHQRAPRSIHMERTAIIRISLVTKLCSLQETEYEAVL*SDPRGCDTVQSQDLTSIY 10
Query: 238 PLY 230
PL+
Sbjct: 9 PLF 1
Score = 28.6 bits (56), Expect(2) = 1e-064
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -1 / -1
Query: 814 APMFTSCPKILALAST 767
A M TSCPKILA ST
Sbjct: 648 ARMITSCPKILAWGST 601
Score = 24.0 bits (46), Expect(2) = 5e-082
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 768 VEAKAKIFGQEVNIGA 815
VE +A IFGQEV I A
Sbjct: 602 VEPQANIFGQEVIIRA 649
>gb|AV912784.1|AV912784 AV912784 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10e01 5', mRNA sequence
Length = 543
Score = 258 bits (558), Expect(2) = 1e-071
Identities = 104/121 (85%), Positives = 111/121 (91%)
Frame = +2 / +3
Query: 428 KLHAQVGRYKSPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELLPR 607
KLHA+VGRYKSPDEHPFF +DLPE LPP+QYP VLHPIADSININKEIWKMYFDE++PR
Sbjct: 6 KLHAKVGRYKSPDEHPFFPEDLPETLLPPIQYPTVLHPIADSININKEIWKMYFDEVIPR 185
Query: 608 LVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQGGGQSQD 787
LVKEGSDGN+GSSALCDTTCLQALS+RIHYGKFVAEAKFQESPEAYTPAI AQ G Q
Sbjct: 186 LVKEGSDGNSGSSALCDTTCLQALSKRIHYGKFVAEAKFQESPEAYTPAIKAQDGDQLMQ 365
Query: 788 L 790
L
Sbjct: 366 L 368
Score = 212 bits (458), Expect(3) = 2e-060
Identities = 95/115 (82%), Positives = 101/115 (87%)
Frame = -2 / -3
Query: 771 PPWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSS 592
P A +AGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALDP PSLPSFTNLG +S
Sbjct: 349 PS*AFIAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALDPEFPSLPSFTNLGITS 170
Query: 591 SKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGLLYLPTCAWSF 427
SKYIFQISLLIL+ESA+GC+T+GY IGGN SGRS K GCSSGLLYLPT A SF
Sbjct: 169 SKYIFQISLLILMESAIGCRTVGYWIGGNSVSGRSSGKNGCSSGLLYLPTFACSF 5
Score = 187 bits (403), Expect = 7e-047
Identities = 79/104 (75%), Positives = 87/104 (83%)
Frame = -3 / -1
Query: 737 QGTLETWPLPQTSHSGSFWRVPASRLCHKEHWIQHYHHFLLSPILEEVHQNTFSKSLC*Y 558
QGTLETWPLPQTSHSG F RVPASR CHKEHWIQ++HHFLLSP LE +HQ+TFSKSLC*Y
Sbjct: 315 QGTLETWPLPQTSHSGFF*RVPASRSCHKEHWIQNFHHFLLSPTLE*LHQSTFSKSLC*Y 136
Query: 557 **NQQWDAKPLGIA*VATGAQADPWKRKGAHLGSCISQPVHGAF 426
* NQQ DA+PL * AT +QAD +R GAHLGSCISQP+ AF
Sbjct: 135 *WNQQ*DAEPLDTG*AATVSQADLLERMGAHLGSCISQPLRVAF 4
Score = 181 bits (390), Expect = 4e-045
Identities = 81/112 (72%), Positives = 90/112 (80%)
Frame = +1 / +2
Query: 427 KAPCTGWEIQEPR*APFLFQGSA*APVATYAIPKGFASHC*FYQYQQRDLENVF**TSSK 606
KA GWEIQEPR*AP L + SA* VA Y + G AS+C*F+ YQQRDLENV **+ SK
Sbjct: 5 KATRKGWEIQEPR*APILSRRSA*DTVAAYPVSNGSASYC*FH*YQQRDLENVL**SYSK 184
Query: 607 IGERRK*W*CWIQCSL*HNLLAGTLQKDPLWEVCGRGQVSRVP*SLHASHNS 762
+GERRK*W WIQCSL*H+LLAGTL K+PLWEVCGRGQVSRVP*SLH + S
Sbjct: 185 VGERRK*WKFWIQCSL*HDLLAGTL*KNPLWEVCGRGQVSRVP*SLHTCNKS 340
Score = 181 bits (389), Expect(3) = 5e-054
Identities = 79/107 (73%), Positives = 85/107 (79%)
Frame = +3 / +1
Query: 426 KSSMHRLGDTRAQMSTLSFPRICLSPGCHLCNTQGFCIPLLILSISTKRFGKCILMNFFQ 605
+S RLGDTRAQMST SF +ICL C L + Q FCI LLI ISTKRFGKC LM FQ
Sbjct: 4 ESYTQRLGDTRAQMSTHSFQKICLRHCCRLSSIQRFCILLLIPLISTKRFGKCTLMKLFQ 183
Query: 606 DW*KKEVMVMLDPVLFVTQPACRHSPEGSTMGSLWQRPSFKSPLKLT 746
W*KKEVM +LDPVLFVT+PACRHS + STMGSLWQRPSFKSPLKLT
Sbjct: 184 GW*KKEVMEILDPVLFVTRPACRHSLKESTMGSLWQRPSFKSPLKLT 324
Score = 172 bits (370), Expect = 3e-042
Identities = 75/115 (65%), Positives = 81/115 (70%)
Frame = -1 / -2
Query: 778 LASTLGYYGWRVSFRGLLKLGLCHKLPIVDPSGECLQAGCVXXXXXXXXXXXSFFHQSWK 599
L + L +Y VSFRGLLKLGLCHKLPIVD ECLQAG V SFFHQ W
Sbjct: 356 LITVLSFYCRCVSFRGLLKLGLCHKLPIVDSFRECLQAGRVTKSTGSRISITSFFHQPWN 177
Query: 598 KFIKIHFPNLFVDIDRISNGMQNPWVLHRWQPGLRQILGKERVLIWALVSPNLCM 434
FIK+HFPNLFVDI+ ISN MQN W+L R Q LRQI KE VLIWALVSPNLC+
Sbjct: 176 NFIKVHFPNLFVDINGISNRMQNRWILDRRQQCLRQIFWKEWVLIWALVSPNLCV 12
Score = 43.2 bits (88), Expect(3) = 5e-054
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +3 / +1
Query: 729 SPLKLTRQP**PKVEAKAKIFGQEVNIGAKDNGSPPV 839
SP + + + +VE KAKIFGQEVNIGA+ G P V
Sbjct: 370 SPTRRSERAIEHRVETKAKIFGQEVNIGAEAKGMPCV 480
Score = 35.9 bits (72), Expect(3) = 2e-060
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1 / -2
Query: 814 APMFTSCPKILALAST 767
APMFTSCP ILAL ST
Sbjct: 455 APMFTSCPNILALVST 408
Score = 32.2 bits (64), Expect(2) = 1e-071
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3 / +2
Query: 834 PVYKIRPSLVAELY 875
PVYKIRPSLVA LY
Sbjct: 473 PVYKIRPSLVAGLY 514
Score = 25.8 bits (50), Expect(3) = 5e-054
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1 / +3
Query: 841 TKSGRAWSPSCTCPG 885
T+SG AWS CT G
Sbjct: 480 TRSGPAWSLDCTATG 524
Score = 23.1 bits (44), Expect(3) = 2e-060
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3 / -3
Query: 884 PGQVQLGDQARPDFVDR 834
P VQ DQA PD V R
Sbjct: 523 PVAVQSSDQAGPDLVHR 473
>gb|AV915960.1|AV915960 AV915960 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16n12 5', mRNA sequence
Length = 470
Score = 248 bits (536), Expect(2) = 1e-071
Identities = 100/116 (86%), Positives = 106/116 (91%)
Frame = +2 / +3
Query: 443 VGRYKSPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYFDELLPRLVKEG 622
VGRYKSPDEHPFF +DLPE LPP+QYP VLHPIADSININKEIWKMYFDE++PRLVKEG
Sbjct: 3 VGRYKSPDEHPFFPEDLPETLLPPIQYPTVLHPIADSININKEIWKMYFDEVIPRLVKEG 182
Query: 623 SDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQGGGQSQDL 790
SDGN+GSSALCDTTCLQALS+RIHYGKFVAEAKFQESPEAYTPAI AQ G Q L
Sbjct: 183 SDGNSGSSALCDTTCLQALSKRIHYGKFVAEAKFQESPEAYTPAIKAQDGDQLMQL 350
Score = 208 bits (448), Expect(2) = 1e-057
Identities = 92/110 (83%), Positives = 98/110 (89%)
Frame = -2 / -2
Query: 771 PPWAIMAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALDPALPSLPSFTNLGRSS 592
P A +AGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALDP PSLPSFTNLG +S
Sbjct: 331 PS*AFIAGV*ASGDS*NLASATNFP*WILLESACKQVVSQRALDPEFPSLPSFTNLGITS 152
Query: 591 SKYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGLLYLPT 442
SKYIFQISLLIL+ESA+GC+T+GY IGGN SGRS K GCSSGLLYLPT
Sbjct: 151 SKYIFQISLLILMESAIGCRTVGYWIGGNSVSGRSSGKNGCSSGLLYLPT 2
Score = 183 bits (395), Expect = 9e-046
Identities = 77/99 (77%), Positives = 84/99 (84%)
Frame = -3 / -3
Query: 737 QGTLETWPLPQTSHSGSFWRVPASRLCHKEHWIQHYHHFLLSPILEEVHQNTFSKSLC*Y 558
QGTLETWPLPQTSHSG F RVPASR CHKEHWIQ++HHFLLSP LE +HQ+TFSKSLC*Y
Sbjct: 297 QGTLETWPLPQTSHSGFF*RVPASRSCHKEHWIQNFHHFLLSPTLE*LHQSTFSKSLC*Y 118
Query: 557 **NQQWDAKPLGIA*VATGAQADPWKRKGAHLGSCISQP 441
* NQQ DA+PL * AT +QAD +R GAHLGSCISQP
Sbjct: 117 *WNQQ*DAEPLDTG*AATVSQADLLERMGAHLGSCISQP 1
Score = 180 bits (387), Expect = 1e-044
Identities = 78/102 (76%), Positives = 83/102 (81%)
Frame = +3 / +1
Query: 441 RLGDTRAQMSTLSFPRICLSPGCHLCNTQGFCIPLLILSISTKRFGKCILMNFFQDW*KK 620
RLGDTRAQMST SF +ICL C L + Q FCI LLI ISTKRFGKC LM FQ W*KK
Sbjct: 1 RLGDTRAQMSTHSFQKICLRHCCRLSSIQRFCILLLIPLISTKRFGKCTLMKLFQGW*KK 180
Query: 621 EVMVMLDPVLFVTQPACRHSPEGSTMGSLWQRPSFKSPLKLT 746
EVM +LDPVLFVT+PACRHS + STMGSLWQRPSFKSPLKLT
Sbjct: 181 EVMEILDPVLFVTRPACRHSLKESTMGSLWQRPSFKSPLKLT 306
Score = 179 bits (386), Expect = 2e-044
Identities = 79/107 (73%), Positives = 88/107 (82%)
Frame = +1 / +2
Query: 442 GWEIQEPR*APFLFQGSA*APVATYAIPKGFASHC*FYQYQQRDLENVF**TSSKIGERR 621
GWEIQEPR*AP L + SA* VA Y + G AS+C*F+ YQQRDLENV **+ SK+GERR
Sbjct: 2 GWEIQEPR*APILSRRSA*DTVAAYPVSNGSASYC*FH*YQQRDLENVL**SYSKVGERR 181
Query: 622 K*W*CWIQCSL*HNLLAGTLQKDPLWEVCGRGQVSRVP*SLHASHNS 762
K*W WIQCSL*H+LLAGTL K+PLWEVCGRGQVSRVP*SLH + S
Sbjct: 182 K*WKFWIQCSL*HDLLAGTL*KNPLWEVCGRGQVSRVP*SLHTCNKS 322
Score = 166 bits (356), Expect = 2e-040
Identities = 73/112 (65%), Positives = 78/112 (69%)
Frame = -1 / -1
Query: 778 LASTLGYYGWRVSFRGLLKLGLCHKLPIVDPSGECLQAGCVXXXXXXXXXXXSFFHQSWK 599
L + L +Y VSFRGLLKLGLCHKLPIVD ECLQAG V SFFHQ W
Sbjct: 338 LITVLSFYCRCVSFRGLLKLGLCHKLPIVDSFRECLQAGRVTKSTGSRISITSFFHQPWN 159
Query: 598 KFIKIHFPNLFVDIDRISNGMQNPWVLHRWQPGLRQILGKERVLIWALVSPN 443
FIK+HFPNLFVDI+ ISN MQN W+L R Q LRQI KE VLIWALVSPN
Sbjct: 158 NFIKVHFPNLFVDINGISNRMQNRWILDRRQQCLRQIFWKEWVLIWALVSPN 3
Score = 42.3 bits (86), Expect(2) = 1e-071
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3 / +3
Query: 765 KVEAKAKIFGQEVNIGAKDNGSP 833
+VE KAKIFGQEVNIGA+ G P
Sbjct: 387 RVETKAKIFGQEVNIGAEAKGMP 455
Score = 35.9 bits (72), Expect(2) = 1e-057
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -1 / -2
Query: 814 APMFTSCPKILALAST 767
APMFTSCP ILAL ST
Sbjct: 436 APMFTSCPNILALVST 389
>gb|BF631171.2|BF631171 HVSMEb0015C20f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0015C20f, mRNA sequence
Length = 777
Score = 251 bits (542), Expect = 5e-066
Identities = 100/119 (84%), Positives = 111/119 (93%)
Frame = +2 / +2
Query: 233 ERVDRSDILTLDSIRQVLIRLEDSIIFGLLERAQFCYNADTYDSNAFHMDGFGGSLVEYI 412
+R+DRS ILTLDSIR LIRLEDSIIFGLLERAQ+CYNADTYDS++FH+DGFGGSLVE++
Sbjct: 320 QRIDRSQILTLDSIRTSLIRLEDSIIFGLLERAQYCYNADTYDSSSFHVDGFGGSLVEFM 499
Query: 413 VRETEKLHAQVGRYKSPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKEIWKMYF 589
VRETEKLHA+VGRYKSPDEHPFF +DLPE LPP+QYP LHPIADSININKEIWKMYF
Sbjct: 500 VRETEKLHAKVGRYKSPDEHPFFPEDLPETLLPPIQYPTGLHPIADSININKEIWKMYF 676
Score = 199 bits (428), Expect = 3e-050
Identities = 90/118 (76%), Positives = 99/118 (83%)
Frame = -2 / -1
Query: 588 KYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGLLYLPTCAWSFSVSLTI 409
KYIFQISLLIL+ESA+GC+ +GY IGGN SGRS K GCSSGLLYLPT A SFSVSLT+
Sbjct: 675 KYIFQISLLILMESAIGCRPVGYWIGGNSVSGRSSGKNGCSSGLLYLPTFACSFSVSLTM 496
Query: 408 YSTKDPPKPSMWKALLSYVSAL*QNCALSKRPNMMLSSSLIKTCLMLSNVNMSLRSTL 235
STK+PP PS WK LLSYVSAL*Q CALSKRPNMMLSSSLIK L+LS V++ LRS L
Sbjct: 495 NSTKEPPNPSTWKELLSYVSAL*QYCALSKRPNMMLSSSLIKEVLILSKVSI*LRSIL 322
Score = 188 bits (404), Expect = 5e-047
Identities = 83/121 (68%), Positives = 97/121 (80%)
Frame = -1 / -3
Query: 589 KIHFPNLFVDIDRISNGMQNPWVLHRWQPGLRQILGKERVLIWALVSPNLCMELFSFSNY 410
K+HFPNLFVDI+ ISN MQ W+L R Q LRQI KE VLIWALVSPNLC+ LFSFSN+
Sbjct: 676 KVHFPNLFVDINGISNRMQTRWILDRRQQCLRQIFWKEWVLIWALVSPNLCV*LFSFSNH 497
Query: 409 IFNQRSSKTIHVESIAIICISIVTKLCSLQKAKYDAVF*SNQNLSDAIQCQYVTSINPLY 230
FNQR+ K+IH+E AII ISIVT LCSLQ+ +YDAVF*S+Q SD +Q QY+TSI PL+
Sbjct: 496 EFNQRAPKSIHMERTAIIRISIVTILCSLQETEYDAVF*SDQRGSDTVQSQYLTSIYPLF 317
Query: 229 L 227
L
Sbjct: 316 L 314
Score = 168 bits (361), Expect = 4e-041
Identities = 78/119 (65%), Positives = 87/119 (73%)
Frame = +1 / +1
Query: 229 GREG*SK*HIDIG*HQTSFD*TRRQHHIWPFGESTVLLQC*YI**QCFPHGWFWRIFG*I 408
G E SK + D G +Q FD TRRQHHI GESTVLLQC*Y+**Q FP GW W +FG*I
Sbjct: 316 GTEDRSKSNTDFGQYQNLFDQTRRQHHIRSLGESTVLLQC*YV**QFFPCGWIWGLFG*I 495
Query: 409 YS*RN*KAPCTGWEIQEPR*APFLFQGSA*APVATYAIPKGFASHC*FYQYQQRDLENV 585
+ *RN*KA GWEIQEPR*AP L + SA* VA Y + G AS+C*F+ YQQRDLENV
Sbjct: 496 HG*RN*KATRKGWEIQEPR*APILSRRSA*DTVAAYPVSNGSASYC*FH*YQQRDLENV 672
Score = 162 bits (349), Expect = 2e-039
Identities = 78/118 (66%), Positives = 82/118 (69%)
Frame = +3 / +3
Query: 237 GLIEVTY*HWIASDKF*LD*KTASYLAFWREHSFVTMLIHMIAMLSTWMVLEDLWLNI*L 416
G IEV Y* W S+ * D*KTASY WREHS VTMLI MIA+LS WM L LWLN L
Sbjct: 324 G*IEVKY*LWTVSEPL*SD*KTASYSVSWREHSIVTMLIRMIAVLSMWMDLGALWLNSWL 503
Query: 417 EKLKSSMHRLGDTRAQMSTLSFPRICLSPGCHLCNTQGFCIPLLILSISTKRFGKCIL 590
EKLKS RLGDTRAQMST SF +ICL C L + Q CI LLI ISTKRFGKC L
Sbjct: 504 EKLKSYTQRLGDTRAQMSTHSFQKICLRHCCRLSSIQRVCILLLIPLISTKRFGKCTL 677
Score = 144 bits (310), Expect = 5e-034
Identities = 66/95 (69%), Positives = 73/95 (76%)
Frame = -3 / -2
Query: 590 QNTFSKSLC*Y**NQQWDAKPLGIA*VATGAQADPWKRKGAHLGSCISQPVHGAFQFL*L 411
Q+TFSKSLC*Y* NQQ DA PL * AT +QAD +R GAHLGSCISQP+ AFQFL*
Sbjct: 677 QSTFSKSLC*Y*WNQQ*DADPLDTG*AATVSQADLLERMGAHLGSCISQPLRVAFQFL*P 498
Query: 410 YIQPKILQNHPCGKHCYHMYQHCNKTVLSPKGQI* 306
IQPK Q HP GK+CYH YQHCN TVLSP+ +I*
Sbjct: 497 *IQPKSPQIHPHGKNCYHTYQHCNNTVLSPRDRI* 393
>gb|BE455736.3|BE455736 HVSMEg0019G20f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019G20f, mRNA sequence
Length = 829
Score = 220 bits (474), Expect(3) = 3e-064
Identities = 90/141 (63%), Positives = 114/141 (80%)
Frame = +2 / +2
Query: 167 GPAPRNKGLRAANNSATPIAKVERVDRSDILTLDSIRQVLIRLEDSIIFGLLERAQFCYN 346
GP+ + + L AA+N++ P+ + +R+DRS ILTLDSIR LIRLEDSIIFGLLERAQ+CYN
Sbjct: 236 GPSRQARALAAASNNSAPLVEEQRIDRSQILTLDSIRTSLIRLEDSIIFGLLERAQYCYN 415
Query: 347 ADTYDSNAFHMDGFGGSLVEYIVRETEKLHAQVGRYKSPDEHPFFSKDLPEPRLPPMQYP 526
ADTYDS++FH+DGFGGSLVE++VR+TEKLHA+ GRYKSP+E PFFSK LPE + P+ Y
Sbjct: 416 ADTYDSSSFHVDGFGGSLVEFMVRKTEKLHAKGGRYKSPNEAPFFSKKLPETLVAPIPYS 595
Query: 527 RVLHPIADSININKEIWKMYF 589
L DSIN N++ W+ YF
Sbjct: 596 TGLDSNGDSINNNQKDWEKYF 658
Score = 159 bits (341), Expect(3) = 5e-047
Identities = 81/141 (57%), Positives = 92/141 (65%)
Frame = -2 / -2
Query: 588 KYIFQISLLILIESAMGCKTLGYCIGGNRGSGRSLEKKGCSSGLLYLPTCAWSFSVSLTI 409
KY Q L+L+ES + + + Y IG SG EKKG S GLLYLP A SFSV LT+
Sbjct: 657 KYFSQSFWLLLMESPLESRPVEYGIGATSVSGSFFEKKGASLGLLYLPPFACSFSVFLTM 478
Query: 408 YSTKDPPKPSMWKALLSYVSAL*QNCALSKRPNMMLSSSLIKTCLMLSNVNMSLRSTLST 229
STK+PP PS WK LLSYVSAL*Q CALSKRPNMMLSSSLIK L+LS V++ LRS L +
Sbjct: 477 NSTKEPPNPSTWKELLSYVSAL*QYCALSKRPNMMLSSSLIKEVLILSKVSI*LRSILCS 298
Query: 228 LAMGVAELLAARSPLFLGAGP 166
G L AA S GP
Sbjct: 297 STSGAELLDAAASARACRDGP 235
Score = 136 bits (292), Expect(2) = 9e-037
Identities = 67/121 (55%), Positives = 84/121 (69%)
Frame = -1 / -1
Query: 589 KIHFPNLFVDIDRISNGMQNPWVLHRWQPGLRQILGKERVLIWALVSPNLCMELFSFSNY 410
K+ FP V I+ I+ +Q + +R LRQ KE I ALVSP LC+ LFSFSN+
Sbjct: 658 KVLFPIFLVIINGITIRIQTRGIRNRRNQCLRQFF*KEGGFIGALVSPTLCV*LFSFSNH 479
Query: 409 IFNQRSSKTIHVESIAIICISIVTKLCSLQKAKYDAVF*SNQNLSDAIQCQYVTSINPLY 230
FNQR+ K+IH+E AII ISIVT LCSLQ+ +YDAVF*S+Q SD +Q QY+TSI PL+
Sbjct: 478 EFNQRAPKSIHMERTAIIRISIVTILCSLQETEYDAVF*SDQRGSDTVQSQYLTSIYPLF 299
Query: 229 L 227
L
Sbjct: 298 L 296
Score = 129 bits (277), Expect(3) = 1e-032
Identities = 64/119 (53%), Positives = 76/119 (63%)
Frame = +1 / +1
Query: 175 AQEQGAPRGQQLRNAHS*GREG*SK*HIDIG*HQTSFD*TRRQHHIWPFGESTVLLQC*Y 354
A GA R Q G E SK + D G +Q FD TRRQHHI GESTVLLQC*Y
Sbjct: 244 AASAGAGRCIQQLRPAGGGTEDRSKSNTDFGQYQNLFDQTRRQHHIRSLGESTVLLQC*Y 423
Query: 355 I**QCFPHGWFWRIFG*IYS*RN*KAPCTGWEIQEPR*APFLFQGSA*APVATYAIPKG 531
+**Q FP GW W +FG*I+ *+N*KA GWEIQEP+*+P LF+ +A* Y++ G
Sbjct: 424 V**QFFPCGWIWGLFG*IHG*KN*KATRKGWEIQEPQ*SPLLFKKTA*DTGCAYSVFHG 600
Score = 124 bits (266), Expect = 6e-028
Identities = 65/122 (53%), Positives = 72/122 (59%)
Frame = +3 / +3
Query: 237 GLIEVTY*HWIASDKF*LD*KTASYLAFWREHSFVTMLIHMIAMLSTWMVLEDLWLNI*L 416
G IEV Y* W S+ * D*KTASY WREHS VTMLI MIA+LS WM L LWLN L
Sbjct: 306 G*IEVKY*LWTVSEPL*SD*KTASYSVSWREHSIVTMLIRMIAVLSMWMDLGALWLNSWL 485
Query: 417 EKLKSSMHRLGDTRAQMSTLSFPRICLSPGCHLCNTQGFCIPLLILSISTKRFGKCILMN 596
EKLKS R+GDTRA M SF + CL L I ++I I TK+ GK L
Sbjct: 486 EKLKSYTQRVGDTRAPMKPPSFQKNCLRHWLRLFRIPRVWILMVIPLIITKKIGKSTLDE 665
Query: 597 FF 602
F
Sbjct: 666 SF 671
Score = 37.3 bits (75), Expect(2) = 9e-037
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / -3
Query: 619 FFHQSWKKFIKIHFPNLF 566
FFHQ WK FI+ FPNLF
Sbjct: 689 FFHQPWKTFIQSTFPNLF 636
Score = 37.3 bits (75), Expect(3) = 5e-047
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = -3 / -2
Query: 689 SFWRVPASRLCHKEHWIQHYHHFLLSPILEEVHQNTFSKS 570
SF RVP + HK+ Q + F LSP LE H FS+S
Sbjct: 759 SFKRVPQTSWFHKDPGSQIFIPFFLSPTLENFHPKYFSQS 640
Score = 35.0 bits (70), Expect(3) = 3e-064
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +3 / +1
Query: 567 KRFGKCILMNFFQDW*KKEVMVMLDPVLFV 656
KR GK + M FQ W*KKE L P +FV
Sbjct: 637 KRLGKVLWMKVFQGW*KKEGNENLGPGVFV 726
Score = 30.4 bits (60), Expect(3) = 5e-047
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1 / -1
Query: 745 VSFRGLLKLGLCHKLP 698
V+F GL K+GL HKLP
Sbjct: 817 VTFEGLFKIGLWHKLP 770
Score = 29.5 bits (58), Expect(3) = 3e-064
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1 / +1
Query: 667 LAGTLQKDPLWEVCGRGQVSRVP*SLH 747
L ++ P WEVC + Q + P LH
Sbjct: 739 LGDPFKRKPFWEVCAKAQF*KAPRRLH 819
Score = 24.9 bits (48), Expect(3) = 1e-032
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 696 MGSLWQRPSFKSPLKLT 746
+GSL Q P KSP K+T
Sbjct: 768 LGSLCQSPILKSPSKVT 818
Score = 23.5 bits (45), Expect(3) = 1e-032
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3 / +1
Query: 567 KRFGKCILMNFFQDW 611
KR GK + M FQ W
Sbjct: 637 KRLGKVLWMKVFQGW 681
>gb|BE216096.1|BE216096 HV_CEb0009G14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009G14f, mRNA sequence
Length = 578
Score = 208 bits (448), Expect = 4e-053
Identities = 83/114 (72%), Positives = 101/114 (88%)
Frame = +2 / +1
Query: 167 GPAPRNKGLRAANNSATPIAKVERVDRSDILTLDSIRQVLIRLEDSIIFGLLERAQFCYN 346
GP+ + + L AA+N++ P+ + +R+DRS ILTLDSIR LIRLEDSIIFGLLERAQ+CYN
Sbjct: 235 GPSRQARALAAASNNSAPLVEEQRIDRSQILTLDSIRTSLIRLEDSIIFGLLERAQYCYN 414
Query: 347 ADTYDSNAFHMDGFGGSLVEYIVRETEKLHAQVGRYKSPDEHPFFSKDLPEPRL 508
ADTYDS++FH+DGFGGSLVE++VRETEKLHA+VGRYKSPDEHPFF +DLPE L
Sbjct: 415 ADTYDSSSFHVDGFGGSLVEFMVRETEKLHAKVGRYKSPDEHPFFPEDLPETLL 576
Score = 157 bits (337), Expect = 9e-038
Identities = 77/115 (66%), Positives = 83/115 (72%)
Frame = -2 / -1
Query: 510 GNRGSGRSLEKKGCSSGLLYLPTCAWSFSVSLTIYSTKDPPKPSMWKALLSYVSAL*QNC 331
GN SGRS K GCSSGLLYLPT A SFSVSLT+ STK+PP PS WK LLSYVSAL*Q C
Sbjct: 578 GNSVSGRSSGKNGCSSGLLYLPTFACSFSVSLTMNSTKEPPNPSTWKELLSYVSAL*QYC 399
Query: 330 ALSKRPNMMLSSSLIKTCLMLSNVNMSLRSTLSTLAMGVAELLAARSPLFLGAGP 166
ALSKRPNMMLSSSLIK L+LS V++ LRS L + G L AA S GP
Sbjct: 398 ALSKRPNMMLSSSLIKEVLILSKVSI*LRSILCSSTSGAELLDAAASARACRDGP 234
Score = 143 bits (307), Expect = 1e-033
Identities = 65/94 (69%), Positives = 76/94 (80%)
Frame = -1 / -3
Query: 508 QPGLRQILGKERVLIWALVSPNLCMELFSFSNYIFNQRSSKTIHVESIAIICISIVTKLC 329
Q LRQI KE VLIWALVSPNLC+ LFSFSN+ FNQR+ K+IH+E AII ISIVT LC
Sbjct: 576 QQCLRQIFWKEWVLIWALVSPNLCV*LFSFSNHEFNQRAPKSIHMERTAIIRISIVTILC 397
Query: 328 SLQKAKYDAVF*SNQNLSDAIQCQYVTSINPLYL 227
SLQ+ +YDAVF*S+Q SD +Q QY+TSI PL+L
Sbjct: 396 SLQETEYDAVF*SDQRGSDTVQSQYLTSIYPLFL 295
Score = 131 bits (281), Expect = 5e-030
Identities = 67/112 (59%), Positives = 73/112 (65%)
Frame = +1 / +3
Query: 175 AQEQGAPRGQQLRNAHS*GREG*SK*HIDIG*HQTSFD*TRRQHHIWPFGESTVLLQC*Y 354
A GA R Q G E SK + D G +Q FD TRRQHHI GESTVLLQC*Y
Sbjct: 243 AASAGAGRCIQQLRPAGGGTEDRSKSNTDFGQYQNLFDQTRRQHHIRSLGESTVLLQC*Y 422
Query: 355 I**QCFPHGWFWRIFG*IYS*RN*KAPCTGWEIQEPR*APFLFQGSA*APVA 510
+**Q FP GW W +FG*I+ *RN*KA GWEIQEPR*AP L + SA* VA
Sbjct: 423 V**QFFPCGWIWGLFG*IHG*RN*KATRKGWEIQEPR*APILSRRSA*DTVA 578
Score = 128 bits (275), Expect = 3e-029
Identities = 61/91 (67%), Positives = 64/91 (70%)
Frame = +3 / +2
Query: 237 GLIEVTY*HWIASDKF*LD*KTASYLAFWREHSFVTMLIHMIAMLSTWMVLEDLWLNI*L 416
G IEV Y* W S+ * D*KTASY WREHS VTMLI MIA+LS WM L LWLN L
Sbjct: 305 G*IEVKY*LWTVSEPL*SD*KTASYSVSWREHSIVTMLIRMIAVLSMWMDLGALWLNSWL 484
Query: 417 EKLKSSMHRLGDTRAQMSTLSFPRICLSPGC 509
EKLKS RLGDTRAQMST SF +ICL C
Sbjct: 485 EKLKSYTQRLGDTRAQMSTHSFQKICLRHCC 577
Score = 108 bits (231), Expect = 4e-023
Identities = 47/68 (69%), Positives = 53/68 (77%)
Frame = -3 / -2
Query: 509 ATGAQADPWKRKGAHLGSCISQPVHGAFQFL*LYIQPKILQNHPCGKHCYHMYQHCNKTV 330
AT +QAD +R GAHLGSCISQP+ AFQFL* IQPK Q HP GK+CYH YQHCN TV
Sbjct: 577 ATVSQADLLERMGAHLGSCISQPLRVAFQFL*P*IQPKSPQIHPHGKNCYHTYQHCNNTV 398
Query: 329 LSPKGQI* 306
LSP+ +I*
Sbjct: 397 LSPRDRI* 374
>gb|BI960271.1|BI960271 HVSMEn0024A19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024A19f, mRNA sequence
Length = 633
Score = 172 bits (371), Expect = 2e-042
Identities = 69/83 (83%), Positives = 79/83 (95%)
Frame = +2 / +2
Query: 233 ERVDRSDILTLDSIRQVLIRLEDSIIFGLLERAQFCYNADTYDSNAFHMDGFGGSLVEYI 412
+R+DRS ILTLDSIR LIRLEDSIIFGLLERAQ+CYNADTYDS++FH+DG GGSLVE++
Sbjct: 380 QRIDRSQILTLDSIRTSLIRLEDSIIFGLLERAQYCYNADTYDSSSFHVDGSGGSLVEFM 559
Query: 413 VRETEKLHAQVGRYKSPDEHPFF 481
VRETEKLHA+VGRYKSP+EHPFF
Sbjct: 560 VRETEKLHAKVGRYKSPNEHPFF 628
Score = 137 bits (294), Expect = 8e-032
Identities = 63/82 (76%), Positives = 68/82 (82%)
Frame = -2 / -1
Query: 480 KKGCSSGLLYLPTCAWSFSVSLTIYSTKDPPKPSMWKALLSYVSAL*QNCALSKRPNMML 301
K GCS GLLYLPT A SFSVSLT+ STK+PP PS WK LLSYVSAL*Q CALSKRPNMML
Sbjct: 627 KNGCSFGLLYLPTFACSFSVSLTMNSTKEPPDPSTWKELLSYVSAL*QYCALSKRPNMML 448
Query: 300 SSSLIKTCLMLSNVNMSLRSTL 235
SSSLIK L+LS V++ LRS L
Sbjct: 447 SSSLIKEVLILSKVSI*LRSIL 382
Score = 134 bits (287), Expect = 7e-031
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = -1 / -3
Query: 481 KERVLIWALVSPNLCMELFSFSNYIFNQRSSKTIHVESIAIICISIVTKLCSLQKAKYDA 302
KE VLIWALVSPNLC+ LFSFSN+ FNQR+ ++IH+E AII ISIVT LCSLQ+ +YDA
Sbjct: 628 KEWVLIWALVSPNLCV*LFSFSNHEFNQRAPRSIHMERTAIIRISIVTILCSLQETEYDA 449
Query: 301 VF*SNQNLSDAIQCQYVTSINPLYL 227
VF*S+Q SD +Q QY+TSI PL+L
Sbjct: 448 VF*SDQRGSDTVQSQYLTSIYPLFL 374
Score = 123 bits (264), Expect = 1e-027
Identities = 56/84 (66%), Positives = 62/84 (73%)
Frame = +1 / +1
Query: 229 GREG*SK*HIDIG*HQTSFD*TRRQHHIWPFGESTVLLQC*YI**QCFPHGWFWRIFG*I 408
G E SK + D G +Q FD TRRQHHI GESTVLLQC*Y+**Q FP GW W +FG*I
Sbjct: 376 GTEDRSKSNTDFGQYQNLFDQTRRQHHIRSLGESTVLLQC*YV**QFFPCGWIWGLFG*I 555
Query: 409 YS*RN*KAPCTGWEIQEPR*APFL 480
+ *RN*KA GWEIQEP+*AP L
Sbjct: 556 HG*RN*KATRKGWEIQEPK*APIL 627
Score = 119 bits (254), Expect = 3e-026
Identities = 57/82 (69%), Positives = 59/82 (71%)
Frame = +3 / +3
Query: 237 GLIEVTY*HWIASDKF*LD*KTASYLAFWREHSFVTMLIHMIAMLSTWMVLEDLWLNI*L 416
G IEV Y* W S+ * D*KTASY WREHS VTMLI MIA+LS WM L LWLN L
Sbjct: 384 G*IEVKY*LWTVSEPL*SD*KTASYSVSWREHSIVTMLIRMIAVLSMWMDLGALWLNSWL 563
Query: 417 EKLKSSMHRLGDTRAQMSTLSF 482
EKLKS RLGDTRAQMST SF
Sbjct: 564 EKLKSYTQRLGDTRAQMSTHSF 629
Score = 100 bits (214), Expect = 8e-021
Identities = 42/59 (71%), Positives = 47/59 (79%)
Frame = -3 / -2
Query: 482 KRKGAHLGSCISQPVHGAFQFL*LYIQPKILQNHPCGKHCYHMYQHCNKTVLSPKGQI* 306
+R GAHLGSCISQP+ AFQFL* IQPK Q HP GK+CYH YQHCN TVLSP+ +I*
Sbjct: 629 ERMGAHLGSCISQPLRVAFQFL*P*IQPKSPQIHPHGKNCYHTYQHCNNTVLSPRDRI* 453
>gb|BF623318.1|BF623318 HVSMEa0015G04f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015G04f, mRNA sequence
Length = 839
Score = 141 bits (303), Expect(2) = 1e-036
Identities = 57/88 (64%), Positives = 74/88 (84%)
Frame = +2 / +1
Query: 167 GPAPRNKGLRAANNSATPIAKVERVDRSDILTLDSIRQVLIRLEDSIIFGLLERAQFCYN 346
GP+ + + L AA+N++ P+ + +R+DRS ILTLDSIR LIRLEDSII+GL ERAQ+CYN
Sbjct: 235 GPSRQARALAAASNNSAPLVEEQRIDRSQILTLDSIRTSLIRLEDSIIYGL*ERAQYCYN 414
Query: 347 ADTYDSNAFHMDGFGGSLVEYIVRETEK 430
ADTYD+++ H+DGFGGSLVE +VRET K
Sbjct: 415 ADTYDTSSLHVDGFGGSLVELMVRETHK 498
Score = 31.8 bits (63), Expect(2) = 1e-036
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2 / +3
Query: 434 HAQVGRYKSPDEHPFFSKDLPEPR 505
HA+VG K+P EH F+K L + R
Sbjct: 501 HAKVGMNKTPYEHSLFTKQLTDTR 572
>gb|BG415342.2|BG415342 HVSMEk0006B21f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0006B21f, mRNA sequence
Length = 653
Score = 149 bits (320), Expect = 2e-035
Identities = 60/104 (57%), Positives = 81/104 (77%)
Frame = +2 / +2
Query: 167 GPAPRNKGLRAANNSATPIAKVERVDRSDILTLDSIRQVLIRLEDSIIFGLLERAQFCYN 346
GP+ + + L AA+N++ P+ + + +DRS IL LDSIR LIRLEDS+IF LLERAQ+CYN
Sbjct: 341 GPSRQARALAAASNNSVPLVEEQMIDRSQILDLDSIRTCLIRLEDSMIFRLLERAQYCYN 520
Query: 347 ADTYDSNAFHMDGFGGSLVEYIVRETEKLHAQVGRYKSPDEHPF 478
ADTYD+++FH+DG GGS ++ + + EKLH + GRYK PDEH F
Sbjct: 521 ADTYDNSSFHVDGIGGS*LKSWLEKLEKLHPKGGRYKIPDEHSF 652
>gb|BG309831.1|BG309831 HVSMEc0013A09f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0013A09f, mRNA sequence
Length = 792
Score = 121 bits (258), Expect(2) = 1e-032
Identities = 48/94 (51%), Positives = 61/94 (64%)
Frame = +2 / +2
Query: 509 PPMQYPRVLHPIADSININKEIWKMYFDELLPRLVKEGSDGNAGSSALCDTTCLQALSRR 688
P YP+VLHP A S+ +N IWKMYF+ELLP +G DGN + D CLQALSRR
Sbjct: 293 PTKGYPKVLHPFASSVCVNDAIWKMYFNELLPLFTADGDDGNYAETVALDFACLQALSRR 472
Query: 689 IHYGKFVAEAKFQESPEAYTPAIIAQGGGQSQDL 790
IH GK+VAE KF+++P Y+P I A+ +L
Sbjct: 473 IHCGKYVAEVKFRDAPHDYSPPIRAKDNNALMNL 574
Score = 41.4 bits (84), Expect(2) = 1e-032
Identities = 19/38 (50%), Positives = 26/38 (68%)
Frame = +2 / +1
Query: 257 LTLDSIRQVLIRLEDSIIFGLLERAQFCYNADTYDSNA 370
L+L ++R LIR EDSI+F L+ERA+ NA Y + A
Sbjct: 55 LSLAAVRDQLIREEDSIVFALIERAKRPRNAPAYSAAA 168
>gb|BF623091.2|BF623091 HVSMEa0014D14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0014D14f, mRNA sequence
Length = 903
Score = 120 bits (256), Expect(2) = 5e-032
Identities = 49/115 (42%), Positives = 65/115 (56%)
Frame = +2 / +2
Query: 392 GSLVEYIVRETEKLHAQVGRYKSPDEHPFFSKDLPEPRLPPMQYPRVLHPIADSININKE 571
GS+ E+ VRE + LHA+ G Y+ P++ PF S DLP P P YP+VLHP A S N
Sbjct: 149 GSVAEFFVREAQVLHAKAGHYQKPEDVPFLSHDLPPPVFPTKGYPKVLHPSATSACENDA 328
Query: 572 IWKMYFDELLPRLVKEGSDGNAGSSALCDTTCLQALSRRIHYGKFVAEAKFQESP 736
WKMY +ELLP + +GN +A D C++ LSR K KF ++P
Sbjct: 329 FWKMYLNELLPLFTADWHEGNYAKTAALDFACMKLLSREFIVVKMPLRVKFNDAP 493
Score = 37.7 bits (76), Expect(2) = 5e-032
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2 / +2
Query: 257 LTLDSIRQVLIRLEDSIIFGLLERAQFCYNADTYDSNA 370
L+L ++R LIR +D I+F L+ERA+ NA Y + A
Sbjct: 29 LSLAAVRDQLIREQDHIVFALIERAKRPRNAPAYSAAA 142
>gb|AV917519.1|AV917519 AV917519 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10e01 3', mRNA sequence
Length = 706
Score = 83.1 bits (175), Expect(4) = 4e-029
Identities = 35/42 (83%), Positives = 36/42 (85%)
Frame = +2 / -2
Query: 665 CLQALSRRIHYGKFVAEAKFQESPEAYTPAIIAQGGGQSQDL 790
CLQALS+RIHYGKFVAEAKFQESPEAYTPAI AQ G Q L
Sbjct: 678 CLQALSKRIHYGKFVAEAKFQESPEAYTPAIKAQDGDQLMQL 553
Score = 42.3 bits (86), Expect(4) = 4e-029
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3 / -2
Query: 765 KVEAKAKIFGQEVNIGAKDNGSP 833
+VE KAKIFGQEVNIGA+ G P
Sbjct: 516 RVETKAKIFGQEVNIGAEAKGMP 448
Score = 32.2 bits (64), Expect(4) = 4e-029
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3 / -2
Query: 834 PVYKIRPSLVAELY 875
PVYKIRPSLVA LY
Sbjct: 450 PVYKIRPSLVAGLY 409
Score = 25.8 bits (50), Expect(4) = 4e-029
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / -1
Query: 638 GSSALCDTTCL 670
GSSALCDTT L
Sbjct: 706 GSSALCDTTLL 674
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 472,493,433
Number of Sequences: 312970
Number of extensions: 8666296
Number of successful extensions: 101945
Number of sequences better than 1.0e-020: 16
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 10273312316
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)