TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493944.2.2
(2027 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|AJ534447.1|HVU534447 Hordeum vulgare mRNA for apoplasti... 280 0.0
gb|BF264866.2|BF264866 HV_CEa0010J14f Hordeum vulgare seedl... 232 e-108
gb|BQ764136.1|BQ764136 EBro03_SQ006_J10_R root, 3 week, wat... 208 e-108
gb|CK122199.1|CK122199 BES1824102c17 BES1824 Hordeum vulgar... 280 e-101
gb|BI778225.2|BI778225 EBro07_SQ002_J10_R root, 3 week, red... 232 e-100
emb|AJ567377.2|HVU567377 Hordeum vulgare partial mRNA for s... 90 1e-099
gb|BF625535.2|BF625535 HVSMEa0011C02f Hordeum vulgare seedl... 232 2e-091
gb|BE214358.2|BE214358 HV_CEb0003D11f Hordeum vulgare seedl... 232 5e-089
gb|BF255160.2|BF255160 HVSMEf0006B22f Hordeum vulgare seedl... 151 4e-088
emb|X83233.1|HVSF6FT Hordeum vulgare mRNA for sucrose:fruct... 91 7e-086
gb|BU994370.1|BU994370 HM06N08r HM Hordeum vulgare subsp. v... 248 3e-084
gb|BF260173.2|BF260173 HVSMEf0021E20f Hordeum vulgare seedl... 203 7e-081
emb|A48280.1| Sequence 1 from Patent WO9601904 91 1e-080
gb|BQ762965.1|BQ762965 EBro02_SQ006_O16_R root, 3 week, hyd... 200 9e-080
gb|AV924971.1|AV924971 AV924971 K. Sato unpublished cDNA li... 208 2e-077
gb|BU973477.1|BU973477 HB25B07r BC Hordeum vulgare subsp. v... 197 1e-070
gb|BF064963.3|BF064963 HV_CEb0022D03f Hordeum vulgare seedl... 214 2e-070
gb|BE559132.2|BE559132 HV_CEb0023A11f Hordeum vulgare seedl... 164 2e-070
gb|BU996678.1|BU996678 HM14G07r HM Hordeum vulgare subsp. v... 183 1e-068
gb|AV924972.1|AV924972 AV924972 K. Sato unpublished cDNA li... 208 1e-068
gb|AL505748.1|AL505748 AL505748 Hordeum vulgare Barke roots... 205 3e-068
gb|BF267660.3|BF267660 HV_CEa0018I16f Hordeum vulgare seedl... 208 3e-067
gb|BQ468801.1|BQ468801 HM02G04r HM Hordeum vulgare subsp. v... 114 3e-065
gb|BE559434.1|BE559434 HV_CEb0024K20f Hordeum vulgare seedl... 232 2e-061
gb|BF628700.2|BF628700 HVSMEb0007E05f Hordeum vulgare seedl... 161 3e-058
gb|BJ467660.1|BJ467660 BJ467660 K. Sato unpublished cDNA li... 214 7e-058
gb|BJ457246.1|BJ457246 BJ457246 K. Sato unpublished cDNA li... 214 5e-057
gb|BF258913.2|BF258913 HVSMEf0017A16f Hordeum vulgare seedl... 92 5e-057
gb|BQ471962.1|BQ471962 HV04A04r HV Hordeum vulgare subsp. v... 92 5e-057
gb|BQ768116.1|BQ768116 EBro08_SQ010_A24_R root, 3 week, dro... 92 2e-056
gb|BJ449827.1|BJ449827 BJ449827 K. Sato unpublished cDNA li... 214 2e-056
gb|BE558756.2|BE558756 HV_CEb0020F02f Hordeum vulgare seedl... 83 4e-055
gb|BF065803.2|BF065803 HV_CEb0014A16f Hordeum vulgare seedl... 130 7e-054
gb|BU995607.1|BU995607 HM10M18r HM Hordeum vulgare subsp. v... 83 1e-053
gb|CA019964.1|CA019964 HV13O24r HV Hordeum vulgare subsp. v... 152 3e-052
gb|BQ468711.1|BQ468711 HM02B12r HM Hordeum vulgare subsp. v... 205 5e-052
gb|BQ468810.1|BQ468810 HM02G15r HM Hordeum vulgare subsp. v... 180 1e-051
gb|BF256656.2|BF256656 HVSMEf0010J22f Hordeum vulgare seedl... 102 4e-051
gb|BF627833.2|BF627833 HVSMEb0005O19f Hordeum vulgare seedl... 92 9e-051
gb|AV924542.1|AV924542 AV924542 K. Sato unpublished cDNA li... 199 5e-050
gb|BF254630.1|BF254630 HVSMEf0004I24f Hordeum vulgare seedl... 88 4e-048
gb|CB882214.1|CB882214 HL01D13w HL Hordeum vulgare subsp. v... 155 1e-047
gb|AV923014.1|AV923014 AV923014 K. Sato unpublished cDNA li... 191 1e-047
gb|AV926810.1|AV926810 AV926810 K. Sato unpublished cDNA li... 191 1e-047
gb|BQ463718.1|BQ463718 HG01D14r HG Hordeum vulgare subsp. v... 191 1e-047
gb|AL505127.1|AL505127 AL505127 Hordeum vulgare Barke roots... 189 4e-047
gb|BG301302.1|BG301302 HVSMEb0020J07f Hordeum vulgare seedl... 87 3e-046
gb|BF260867.2|BF260867 HVSMEf0023C11f Hordeum vulgare seedl... 101 8e-046
gb|AL503000.1|AL503000 AL503000 Hordeum vulgare Barke roots... 184 2e-045
gb|BI951140.1|BI951140 HVSMEl0024K02f Hordeum vulgare spike... 183 2e-045
gb|AL507250.1|AL507250 AL507250 Hordeum vulgare Barke devel... 147 3e-045
gb|BG343465.2|BG343465 HVSMEg0005N10f Hordeum vulgare pre-a... 165 5e-045
gb|AV930059.1|AV930059 AV930059 K. Sato unpublished cDNA li... 181 2e-044
gb|BQ767484.1|BQ767484 EBro08_SQ009_D05_R root, 3 week, dro... 180 2e-044
gb|BQ464712.1|BQ464712 HU01A19T HU Hordeum vulgare subsp. v... 136 4e-044
gb|CA014245.1|CA014245 HT10M21r HT Hordeum vulgare subsp. v... 88 4e-044
gb|BQ468368.1|BQ468368 HM01B03T HM Hordeum vulgare subsp. v... 92 7e-044
gb|AV923941.1|AV923941 AV923941 K. Sato unpublished cDNA li... 178 1e-043
gb|BQ468675.1|BQ468675 HM01P04T HM Hordeum vulgare subsp. v... 101 1e-043
gb|BQ466424.1|BQ466424 HT02H23r HT Hordeum vulgare subsp. v... 157 3e-043
gb|BG417552.2|BG417552 HVSMEk0018A17f Hordeum vulgare testa... 80 8e-043
gb|BF267767.3|BF267767 HV_CEa0018N10f Hordeum vulgare seedl... 152 9e-043
gb|BG343198.2|BG343198 HVSMEg0005B02f Hordeum vulgare pre-a... 92 3e-042
gb|AV933837.1|AV933837 AV933837 K. Sato unpublished cDNA li... 106 7e-042
gb|CA020717.1|CA020717 HZ37F12r HZ Hordeum vulgare subsp. v... 114 7e-042
gb|BJ472857.1|BJ472857 BJ472857 K. Sato unpublished cDNA li... 106 2e-041
gb|AV932394.1|AV932394 AV932394 K. Sato unpublished cDNA li... 106 2e-041
gb|AL507193.1|AL507193 AL507193 Hordeum vulgare Barke devel... 84 3e-041
gb|AV923840.1|AV923840 AV923840 K. Sato unpublished cDNA li... 115 3e-041
gb|CA019675.1|CA019675 HV12L20r HV Hordeum vulgare subsp. v... 118 4e-041
gb|BI952001.1|BI952001 HVSMEm0004C17f Hordeum vulgare green... 169 4e-041
gb|BQ467608.1|BQ467608 HS04F05r HS Hordeum vulgare subsp. v... 151 2e-040
gb|AJ434754.1|AJ434754 AJ434754 S00002 Hordeum vulgare subs... 166 3e-040
gb|BQ760946.1|BQ760946 EBro03_SQ003_O23_R root, 3 week, wat... 166 3e-040
gb|AL507249.1|AL507249 AL507249 Hordeum vulgare Barke devel... 81 4e-040
gb|AV933740.1|AV933740 AV933740 K. Sato unpublished cDNA li... 106 6e-039
gb|AL503455.1|AL503455 AL503455 Hordeum vulgare Barke roots... 82 1e-038
gb|AV934074.1|AV934074 AV934074 K. Sato unpublished cDNA li... 106 3e-038
gb|BI776273.2|BI776273 EBem04_SQ001_F05_R embryo, 12 DPA, n... 85 5e-038
gb|BF259635.2|BF259635 HVSMEf0019N16f Hordeum vulgare seedl... 87 7e-038
gb|AV933741.1|AV933741 AV933741 K. Sato unpublished cDNA li... 106 7e-038
gb|CA021243.1|CA021243 HZ39I13r HZ Hordeum vulgare subsp. v... 109 7e-038
gb|BI953662.1|BI953662 HVSMEm0013M11f Hordeum vulgare green... 148 2e-037
gb|BM100630.2|BM100630 EBma01_SQ005_M12_R maternal, 4 DPA, ... 81 3e-037
gb|BJ469279.1|BJ469279 BJ469279 K. Sato unpublished cDNA li... 106 3e-037
gb|BJ469491.1|BJ469491 BJ469491 K. Sato unpublished cDNA li... 106 6e-037
gb|AV930060.1|AV930060 AV930060 K. Sato unpublished cDNA li... 155 1e-036
emb|AJ534444.1|HVU534444 Hordeum vulgare partial mRNA for a... 136 3e-036
gb|AL450603.1|AL450603 AL450603 Hordeum vulgare Barke etiol... 152 5e-036
gb|BJ469356.1|BJ469356 BJ469356 K. Sato unpublished cDNA li... 106 8e-036
gb|AV933260.1|AV933260 AV933260 K. Sato unpublished cDNA li... 109 1e-035
gb|AV932241.1|AV932241 AV932241 K. Sato unpublished cDNA li... 109 1e-035
gb|BI947239.1|BI947239 HVSMEl0004J14f Hordeum vulgare spike... 65 2e-035
gb|BF254985.2|BF254985 HVSMEf0005J22f Hordeum vulgare seedl... 71 2e-035
gb|BQ465125.1|BQ465125 HU02L17r HU Hordeum vulgare subsp. v... 135 2e-035
gb|CA021289.1|CA021289 HZ39K13r HZ Hordeum vulgare subsp. v... 91 3e-035
gb|CA025895.1|CA025895 HZ53H06r HZ Hordeum vulgare subsp. v... 81 3e-035
gb|BF254441.2|BF254441 HVSMEf0004A12f Hordeum vulgare seedl... 105 9e-035
gb|BF630067.2|BF630067 HVSMEb0007N12f Hordeum vulgare seedl... 83 2e-034
gb|BJ463690.1|BJ463690 BJ463690 K. Sato unpublished cDNA li... 74 3e-034
gb|AV932388.1|AV932388 AV932388 K. Sato unpublished cDNA li... 79 6e-034
gb|BG344005.2|BG344005 HVSMEg0007F22f Hordeum vulgare pre-a... 85 6e-034
gb|BQ468522.1|BQ468522 HM01H24T HM Hordeum vulgare subsp. v... 74 1e-033
gb|BF254647.2|BF254647 HVSMEf0004K01f Hordeum vulgare seedl... 92 2e-033
gb|CA026965.1|CA026965 HZ57H19r HZ Hordeum vulgare subsp. v... 136 2e-033
gb|AV934254.1|AV934254 AV934254 K. Sato unpublished cDNA li... 79 4e-033
gb|BQ469569.1|BQ469569 HZ01D05r HZ Hordeum vulgare subsp. v... 136 4e-033
gb|CV061217.1|CV061217 BNEL66c2 Barley EST endosperm librar... 89 1e-032
gb|AV926089.1|AV926089 AV926089 K. Sato unpublished cDNA li... 83 2e-032
gb|BI950277.1|BI950277 HVSMEl0020B05f Hordeum vulgare spike... 140 2e-032
gb|BQ764647.1|BQ764647 EBca01_SQ004_A18_R carpel, pre-anthe... 94 3e-032
gb|BF257665.2|BF257665 HVSMEf0013I03f Hordeum vulgare seedl... 86 3e-032
gb|BQ465277.1|BQ465277 HU03C15r HU Hordeum vulgare subsp. v... 68 3e-031
gb|AV932172.1|AV932172 AV932172 K. Sato unpublished cDNA li... 106 3e-031
gb|BE060860.3|BE060860 HVSMEg0013J24f Hordeum vulgare pre-a... 70 3e-031
gb|BE455593.2|BE455593 HVSMEg0017P19f Hordeum vulgare pre-a... 106 4e-031
gb|CA022519.1|CA022519 HZ43H14r HZ Hordeum vulgare subsp. v... 136 5e-031
gb|CA028144.1|CA028144 HZ61C03r HZ Hordeum vulgare subsp. v... 94 7e-031
gb|BF253435.2|BF253435 HVSMEf0001G15f Hordeum vulgare seedl... 72 8e-031
gb|BQ468963.1|BQ468963 HM02P04r HM Hordeum vulgare subsp. v... 91 1e-030
gb|BU996531.1|BU996531 HM13O15r HM Hordeum vulgare subsp. v... 134 2e-030
gb|BQ662821.1|BQ662821 HS04F05u HS Hordeum vulgare subsp. v... 58 2e-030
gb|AV934053.1|AV934053 AV934053 K. Sato unpublished cDNA li... 106 3e-030
gb|BF258931.3|BF258931 HVSMEf0017B15f Hordeum vulgare seedl... 67 6e-030
gb|AV934255.1|AV934255 AV934255 K. Sato unpublished cDNA li... 79 1e-029
gb|BJ471912.1|BJ471912 BJ471912 K. Sato unpublished cDNA li... 79 2e-029
gb|BF263973.2|BF263973 HV_CEa0008D03f Hordeum vulgare seedl... 84 4e-029
gb|CA023969.1|CA023969 HZ47P18r HZ Hordeum vulgare subsp. v... 121 1e-028
gb|BE420989.1|BE420989 HWM004.F06 ITEC HWM Barley Leaf Libr... 101 2e-028
gb|CA018370.1|CA018370 HV08G21r HV Hordeum vulgare subsp. v... 94 3e-028
gb|BJ473032.1|BJ473032 BJ473032 K. Sato unpublished cDNA li... 79 4e-028
gb|CA003228.1|CA003228 HS09M20r HS Hordeum vulgare subsp. v... 65 5e-028
gb|BJ472753.1|BJ472753 BJ472753 K. Sato unpublished cDNA li... 95 1e-027
gb|BI958333.1|BI958333 HVSMEn0014H06f Hordeum vulgare rachi... 83 1e-027
gb|AV928934.1|AV928934 AV928934 K. Sato unpublished cDNA li... 101 2e-027
gb|CA030695.1|CA030695 HX07N13r HX Hordeum vulgare subsp. v... 101 2e-027
gb|AL505004.1|AL505004 AL505004 Hordeum vulgare Barke roots... 95 2e-027
gb|CA022691.1|CA022691 HZ44B09r HZ Hordeum vulgare subsp. v... 84 2e-027
gb|CA025842.1|CA025842 HZ53E21r HZ Hordeum vulgare subsp. v... 84 2e-027
gb|BG418156.1|BG418156 HVSMEk0021K05f Hordeum vulgare testa... 80 3e-027
gb|CB881780.1|CB881780 HM10N17w HM Hordeum vulgare subsp. v... 101 6e-027
gb|BQ756791.1|BQ756791 EBem09_SQ003_M05_R embryo, 1 Day ger... 60 7e-027
gb|AJ436198.1|AJ436198 AJ436198 S00002 Hordeum vulgare subs... 58 7e-027
gb|BF254279.2|BF254279 HVSMEf0003I12f Hordeum vulgare seedl... 116 2e-026
gb|BF262904.3|BF262904 HV_CEa0005E13f Hordeum vulgare seedl... 80 3e-026
gb|BF626291.2|BF626291 HVSMEa0018E06f Hordeum vulgare seedl... 91 4e-026
gb|AV932645.1|AV932645 AV932645 K. Sato unpublished cDNA li... 79 4e-026
gb|BG344434.1|BG344434 HVSMEg0009E05f Hordeum vulgare pre-a... 90 5e-026
gb|BI959253.1|BI959253 HVSMEn0018O17f Hordeum vulgare rachi... 105 1e-025
gb|CB882529.1|CB882529 HL02C03w HL Hordeum vulgare subsp. v... 95 5e-025
gb|BQ665811.1|BQ665811 HZ01D05u HZ Hordeum vulgare subsp. v... 95 5e-025
gb|CB879899.1|CB879899 HP08F21T HP Hordeum vulgare subsp. v... 95 9e-025
gb|BJ472162.1|BJ472162 BJ472162 K. Sato unpublished cDNA li... 62 1e-024
gb|CA020832.1|CA020832 HZ37P12r HZ Hordeum vulgare subsp. v... 79 1e-024
gb|AL503287.1|AL503287 AL503287 Hordeum vulgare Barke roots... 54 2e-024
gb|BQ661204.1|BQ661204 HM02G15u HM Hordeum vulgare subsp. v... 114 2e-024
gb|AF210722.1|AF210722 Hordeum vulgare variety Morex sucros... 78 4e-024
gb|AJ434586.1|AJ434586 AJ434586 S00002 Hordeum vulgare subs... 91 6e-024
gb|AF210723.1|AF210723 Hordeum vulgare variety Steptoe sucr... 77 7e-024
gb|BJ469224.1|BJ469224 BJ469224 K. Sato unpublished cDNA li... 62 5e-023
gb|BM816245.1|BM816245 HB106H11_SK.ab1 HB Hordeum vulgare s... 59 2e-022
gb|CA002321.1|CA002321 HS07C10r HS Hordeum vulgare subsp. v... 94 3e-022
gb|CB875288.1|CB875288 HX07N13w HX Hordeum vulgare subsp. v... 101 5e-022
gb|BI960418.1|BI960418 HVSMEn0024I13f Hordeum vulgare rachi... 102 6e-022
gb|BQ754305.1|BQ754305 EBca01_SQ003_I07_R carpel, pre-anthe... 105 9e-022
gb|BJ462585.1|BJ462585 BJ462585 K. Sato unpublished cDNA li... 67 1e-021
gb|BF255430.3|BF255430 HVSMEf0006N10f Hordeum vulgare seedl... 51 2e-021
gb|AV922576.1|AV922576 AV922576 K. Sato unpublished cDNA li... 61 2e-021
gb|AV917398.1|AV917398 AV917398 K. Sato unpublished cDNA li... 61 2e-021
gb|BM816244.1|BM816244 HB106H10_SK.ab1 HB Hordeum vulgare s... 55 4e-021
>emb|AJ534447.1|HVU534447 Hordeum vulgare mRNA for apoplastic invertase 1 (cwinw1 gene)
Length = 2095
Score = 280 bits (606), Expect(8) = 0.0
Identities = 108/126 (85%), Positives = 115/126 (91%)
Frame = +1 / +3
Query: 835 GLETSVPPGPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFY 1014
GL+TSV GPRVKHVLKNSLDLRRYDYYTVGTY + ERYVPD+PAGDEH LRYDYGNFY
Sbjct: 840 GLDTSVVSGPRVKHVLKNSLDLRRYDYYTVGTYDRKTERYVPDNPAGDEHHLRYDYGNFY 1019
Query: 1015 ASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEV 1194
ASKTFYDP KRRRILWGWANESD A DDVAKGWAGIQAIPR VWLDPSG+QL+QWP+EE+
Sbjct: 1020 ASKTFYDPVKRRRILWGWANESDAAVDDVAKGWAGIQAIPRKVWLDPSGRQLMQWPVEEL 1199
Query: 1195 EALRAK 1212
EALR K
Sbjct: 1200 EALRGK 1217
Score = 205 bits (443), Expect(8) = 0.0
Identities = 82/104 (78%), Positives = 95/104 (91%)
Frame = +1 / +3
Query: 1492 AAGDKPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGK 1671
+ +KPVVLMC+DPT SS NPNLY+PTFAGFVDTDI+ GKISLRSLIDRSVVESFGAGG+
Sbjct: 1509 STNNKPVVLMCSDPTMSSLNPNLYKPTFAGFVDTDIAKGKISLRSLIDRSVVESFGAGGR 1688
Query: 1672 TCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVM 1803
TCILSRVYP+LA+GK+ARL+VFNNG+ +KVS LTAWEMKKP +
Sbjct: 1689 TCILSRVYPTLALGKNARLHVFNNGKVDIKVSELTAWEMKKPAL 1820
Score = 202 bits (435), Expect(8) = 0.0
Identities = 73/87 (83%), Positives = 78/87 (89%)
Frame = +1 / +3
Query: 187 PLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVA 366
P L TGYHF+P KNWINDPNAPMYYKGWYH FYQYNPKGAVWGNIVWAHSVSRDLINWVA
Sbjct: 201 PSLSTGYHFRPIKNWINDPNAPMYYKGWYHLFYQYNPKGAVWGNIVWAHSVSRDLINWVA 380
Query: 367 LEPALRPSIPGDRYGCWSGSATVLPDG 447
LE A++PSI D+YGCWSGSA +L DG
Sbjct: 381 LETAIQPSIKSDKYGCWSGSAXILRDG 461
Score = 174 bits (374), Expect(10) = 0.0
Identities = 79/98 (80%), Positives = 80/98 (81%)
Frame = -1 / -1
Query: 1796 GFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRSIRLLR 1617
GFFISHAV DTL LPLL T*RRA LP AS G*T ERMQVLPPAPKLSTTDRSIRLLR
Sbjct: 1813 GFFISHAVSSDTLMSTLPLLKT*RRAFLPSASVG*TRERMQVLPPAPKLSTTDRSIRLLR 1634
Query: 1616 DILPFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGL 1503
DILP MSVST PA VG YRFGF DD+VGS HM TTGL
Sbjct: 1633 DILPLAMSVSTKPAKVGLYRFGFRDDMVGSEHMRTTGL 1520
Score = 169 bits (364), Expect(10) = 0.0
Identities = 71/88 (80%), Positives = 72/88 (81%)
Frame = -1 / -1
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 267
PS ADPDQ PYLS MLG A SSATQLMRSRDTECAHTMLPHTAPLGLYW* KWYH
Sbjct: 460 PSRRMXADPDQHPYLSDLMLGWIAVSSATQLMRSRDTECAHTMLPHTAPLGLYW*NKWYH 281
Query: 266 PL*YMGALGSLIQFLGGWKWYPVLSRGL 183
PL*YMGALGSLIQF G KWYPVL G+
Sbjct: 280 PL*YMGALGSLIQFFMGRKWYPVLKLGV 197
Score = 147 bits (316), Expect(10) = 0.0
Identities = 70/98 (71%), Positives = 73/98 (74%)
Frame = -1 / -1
Query: 1211 FALSASTSSIGHCNSCFPLGSSHTVLGMAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS 1032
F LSAS+SS GHC SC PLGSS T LG+AWIPA PLATSS A SDSLAQP RMRRRL GS
Sbjct: 1216 FPLSASSSSTGHCISCLPLGSSQTFLGIAWIPAHPLATSSTAASDSLAQPQRMRRRLTGS 1037
Query: 1031 *NVLDA*KLPXXXXXXXXSPAGSSGTYRSALGWYVPTV 918
* VL+A*KLP SPAG SGTYRS L VPTV
Sbjct: 1036 *KVLEA*KLP*S*RRWCSSPAGLSGTYRSVLRS*VPTV 923
Score = 138 bits (295), Expect(8) = 0.0
Identities = 52/67 (77%), Positives = 57/67 (85%)
Frame = +1 / +3
Query: 448 GGPVIMYTGVDHPDINYQVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPT 627
G P IMYTG+D DINY+VQN+A+PKN SDPLLREWVKP NP+IVPEGGINATQFRDPT
Sbjct: 459 GTPAIMYTGIDRADINYEVQNIAFPKNKSDPLLREWVKPRGNPIIVPEGGINATQFRDPT 638
Query: 628 TAWRGPG 648
TAW G
Sbjct: 639 TAWYADG 659
Score = 115 bits (246), Expect(7) = 4e-098
Identities = 51/71 (71%), Positives = 57/71 (80%)
Frame = +3 / +2
Query: 204 VPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRMGQHRVGALGVARPHQLGGARAGAQ 383
VPLPA +ELDQ SQRAHVLQGVVPF+LP+Q QG +GQHRVGALGVA PHQLGGA G
Sbjct: 218 VPLPAHKELDQRSQRAHVLQGVVPFVLPVQPQGCGVGQHRVGALGVA*PHQLGGAGDGNP 397
Query: 384 TKHPGRQVRLL 416
+H QVR+L
Sbjct: 398 AEHQVGQVRVL 430
Score = 113 bits (242), Expect(7) = 4e-098
Identities = 49/77 (63%), Positives = 56/77 (72%)
Frame = +3 / +2
Query: 1569 DICRICRHGHLERQDIPEKPDRPIGR*ELRSRGQDLHPLQGLPVAGHRQGRSPLRVQQRE 1748
D+ R+C H H + QDI EKPDR + R ELR RGQDLHPL GLP A Q RSP R+QQR+
Sbjct: 1586 DLRRLC*H*HSQGQDISEKPDRSVRRGELRGRGQDLHPLPGLPDARAGQERSPSRLQQRQ 1765
Query: 1749 GARQGVPSHRVGDEEAG 1799
G QGV +H VGDEEAG
Sbjct: 1766 GGHQGVGAHGVGDEEAG 1816
Score = 109 bits (232), Expect(6) = 1e-074
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = -3 / -3
Query: 1797 RLLHLPRGETGHLDVRPPVVEHVEASVLADGQRRVDPGEDAGLAPGSEALNDRSVDQASQ 1618
RLLHLPR E HLDV VVE V+ASVLA +RRVDPGEDAG AP EAL+D +DQASQ
Sbjct: 1814 RLLHLPRRELRHLDVHLAVVEDVKASVLAQRERRVDPGEDAGPAPCPEALHDGPIDQASQ 1635
Query: 1617 GYLAVRDVRVDKSCKCRAV 1561
YLA+ V V+K+C+ R V
Sbjct: 1634 RYLALGYVSVNKACEGRLV 1578
Score = 103 bits (220), Expect(10) = 0.0
Identities = 48/67 (71%), Positives = 48/67 (71%)
Frame = -1 / -1
Query: 647 PGPRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWTW*LMSGWSTPV 468
P AVVGSRN VALMPPSGTM GL GFTHSRSSGSD F G A F T *LMS S PV
Sbjct: 658 PSAYHAVVGSRNWVALMPPSGTMIGLPRGFTHSRSSGSDLFLGKAMFCTS*LMSARSMPV 479
Query: 467 YMITGPP 447
YMI G P
Sbjct: 478 YMIAGVP 458
Score = 102 bits (218), Expect(6) = 1e-074
Identities = 48/79 (60%), Positives = 53/79 (67%)
Frame = -3 / -3
Query: 438 QHRRRPGPAAVPVARDAWSERRL*RHPVDEVSRHRVRPHDVAPYGALGIXXXXXXXXXXX 259
Q RRP PA V V DA + RL RHPVDEV+RHRVRPHDVAP+ LG+
Sbjct: 452 QDXRRPRPAPVLVRLDARLDCRLQRHPVDEVTRHRVRPHDVAPHRTLGVVLVEQMVPPLV 273
Query: 258 VHGRVGIIDPVLGGLEVVP 202
VHGRVGI+DPVL G EVVP
Sbjct: 272 VHGRVGIVDPVLYGPEVVP 216
Score = 98.7 bits (209), Expect(8) = 0.0
Identities = 40/70 (57%), Positives = 52/70 (74%)
Frame = +1 / +3
Query: 1285 ADVEVSFEVSPSALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERT 1464
+ +V +++ GAE LDPALA DA++LC ++ A V GGVGPFGLWVLAS+ +E+T
Sbjct: 1287 SQADVEVSFEVASIDGAEALDPALANDAQKLCSMRGAHVEGGVGPFGLWVLASSKLEEKT 1466
Query: 1465 AVFFRVFKPA 1494
AVFFRVFK A
Sbjct: 1467 AVFFRVFKAA 1496
Score = 96.4 bits (204), Expect(3) = 2e-034
Identities = 42/71 (59%), Positives = 44/71 (61%)
Frame = +2 / +1
Query: 206 TTSSPPRTGSMIPTRPCTTRGGTISSTNTIPRAPYGATSCGRTRCXXXXXXXXXXXXXXD 385
TTS P RTGS IPTRPCTTRGGTI ST+T PR GATSCGRTRC
Sbjct: 220 TTSGP*RTGSTIPTRPCTTRGGTICSTSTTPRVRCGATSCGRTRCRVTSSTGWRWRRQSS 399
Query: 386 QASRATGTAAG 418
+AS T T AG
Sbjct: 400 RASSRTSTGAG 432
Score = 87.2 bits (184), Expect(4) = 3e-038
Identities = 39/64 (60%), Positives = 42/64 (65%)
Frame = -2 / -2
Query: 1765 TP*RAPSRC*TRRGERPCRWPATGRPWRGCRSCPRLRSSQRPIGRSGFSGISCRSRCPCR 1586
TP* P RC* R GER C A+GRP RGCRSCP RSS R RSGFS ISC C C+
Sbjct: 1782 TP*CPPCRC*RREGERSCPARASGRPGRGCRSCPLPRSSPRRTDRSGFSEISCPWLCQCQ 1603
Query: 1585 QILQ 1574
Q L+
Sbjct: 1602 QSLR 1591
Score = 73.9 bits (155), Expect(3) = 2e-034
Identities = 43/70 (61%), Positives = 44/70 (62%)
Frame = +2 / +1
Query: 1517 SCAPTLPSRPRTRTCTARHLQDLSTRTSRTARYP*EA*STDRSLRASEPGARPASSPGST 1696
SCAP P TRT T+R Q L T T ARY *EA*S S RAS GA PASSPGST
Sbjct: 1534 SCAPIQPCHL*TRTYTSRPSQALLTLT*PRARYL*EA*SIGPSWRASGQGAGPASSPGST 1713
Query: 1697 RRWPSARTLA 1726
RR ARTLA
Sbjct: 1714 RRSRWARTLA 1743
Score = 72.1 bits (151), Expect(4) = 3e-038
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = -2 / -2
Query: 325 TRCCPIRRPWDCIGRRNGTTPCSTWARWD 239
TRCCP PW C GR NGTTPCSTWARWD
Sbjct: 339 TRCCPTPHPWGCTGRTNGTTPCSTWARWD 253
Score = 68.0 bits (142), Expect(8) = 0.0
Identities = 28/55 (50%), Positives = 31/55 (56%)
Frame = +1 / +3
Query: 667 LVGSAAGSSPRGVAYVYXXXXXXXXXXXXXPLHSAPTGMWECPDFYPVSKGGAPR 831
L+ A + RGVAYVY PLHSAPTGMWECPD YPV+ G R
Sbjct: 669 LLIGALSGASRGVAYVYRSRDFMRWTRVRKPLHSAPTGMWECPDLYPVTADGRHR 833
Score = 64.3 bits (134), Expect(7) = 4e-098
Identities = 28/44 (63%), Positives = 30/44 (68%)
Frame = +2 / +1
Query: 1049 AASCGAGLTSPTPPPTMWPKAGLESRPFQGRCGWTPAGSSCCSG 1180
AAS GAG TSPTPP T P+ G ESR F+ R GWT G S CSG
Sbjct: 1054 AASSGAGPTSPTPPSTTSPRDGPESRRFRERFGWTRVGGS*CSG 1185
Score = 62.5 bits (130), Expect(7) = 4e-098
Identities = 24/35 (68%), Positives = 32/35 (91%)
Frame = +1 / +3
Query: 1210 KSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVS 1314
+ V++KNRV+K G HVEVTG++T+QADVEVSFEV+
Sbjct: 1218 RPVSIKNRVVKRGEHVEVTGLRTSQADVEVSFEVA 1322
Score = 61.6 bits (128), Expect(7) = 4e-098
Identities = 27/58 (46%), Positives = 31/58 (53%)
Frame = +3 / +2
Query: 462 HVHGRGPPGHQLPGPERGVPEERVGPAAPGVGEALAXXXXXXXXXXXXDAVPRPDHGL 635
HVHG P HQL G E +P+E+VGPAAP VGEA VP PD G+
Sbjct: 473 HVHGHRPRRHQLRGAEHRLPQEQVGPAAPRVGEAAGQPDHRAGGRHQRHPVPGPDDGV 646
Score = 59.3 bits (123), Expect(10) = 0.0
Identities = 25/42 (59%), Positives = 27/42 (64%)
Frame = -1 / -1
Query: 821 PPLLTG*KSGHSHIPVGAECSGXXXXXXXXXXXXRYTYATPR 696
P +TG +SGHSHIPVGAECSG RYTYATPR
Sbjct: 823 PSAVTGYRSGHSHIPVGAECSGFLTRVHRMKSRLRYTYATPR 698
Score = 58.3 bits (121), Expect(10) = 0.0
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = -3 / -3
Query: 1491 GLEHPEEHRGSLLAVGGGQHPQPERPHAAPHVRALHAAQ 1375
GLEHPEE R LL +G G+HPQ E HAA HV HAAQ
Sbjct: 1493 GLEHPEEDRRLLLQLGRGEHPQAEGAHAAFHVGTPHAAQ 1377
Score = 54.2 bits (112), Expect(6) = 1e-074
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -3 / -3
Query: 1152 VQPHRPWNGLDSSPAFGHIVGGGVGLVSPAPQDAA 1048
VQP+ N LDS P+ G +V GGVGLV PAP+DAA
Sbjct: 1157 VQPNLSRNRLDSGPSLGDVVDGGVGLVGPAPEDAA 1053
Score = 52.4 bits (108), Expect(6) = 1e-074
Identities = 24/39 (61%), Positives = 24/39 (61%)
Frame = -1 / -1
Query: 1493 AGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 1377
A LNT K TAV S L EASTH P GPTPP T A H
Sbjct: 1495 AALNTRKKTAVFSSSLDEASTHRPKGPTPPSTWAPLMLH 1379
Score = 51.0 bits (105), Expect(7) = 4e-098
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +3 / +2
Query: 861 PKGEARAQEQPRPPAVRLLHRGHVPPE 941
P+GEARAQEQPRP +RLLHR H+ P+
Sbjct: 866 PQGEARAQEQPRPAPLRLLHRRHLRPQ 946
Score = 50.1 bits (103), Expect(10) = 0.0
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -1 / -1
Query: 1310 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSS 1185
TSKLTSTSAC V PVTST P L TLFL +T +++SS
Sbjct: 1318 TSKLTSTSACEVRSPVTSTCSPRLTTLFLMLTGLFPLSASSS 1193
Score = 46.0 bits (94), Expect(4) = 3e-038
Identities = 19/40 (47%), Positives = 20/40 (50%)
Frame = -2 / -2
Query: 1153 GPATPSLEWPGFQPSLWPHXXXXXXXX*PSPTGCGAAWPG 1034
GPA P E PGF+P W PSP GCG A PG
Sbjct: 1158 GPAKPFSESPGFRPIPWRRRRRRRRTRWPSPRGCGGA*PG 1039
Score = 46.0 bits (94), Expect(6) = 1e-074
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = -3 / -3
Query: 1305 EAHLHVSLCRLYPGHLDVMSCLDYPVLESDR 1213
+AHLHVSL PG LDV+S LD+PVL++DR
Sbjct: 1313 KAHLHVSL*GP*PGDLDVLSPLDHPVLDADR 1221
Score = 44.1 bits (90), Expect(10) = 0.0
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / -2
Query: 928 CPRCSSRTAGGRGCS*ARASP 866
C RCSSR+ GRGCS*ARASP
Sbjct: 933 CRRCSSRSGAGRGCS*ARASP 871
Score = 42.8 bits (87), Expect(10) = 0.0
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -1 / -1
Query: 890 LFLSTCFTLGPGGTDVSSP 834
LFLSTCFTLGP TDVSSP
Sbjct: 895 LFLSTCFTLGPDTTDVSSP 839
Score = 38.2 bits (77), Expect(8) = 0.0
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +2 / +1
Query: 1229 TG*SRQDITSR*PGYRRHRLTWR*A 1303
TG S + TSR PGY HRLTWR*A
Sbjct: 1237 TGWSSGESTSRSPGYGPHRLTWR*A 1311
Score = 32.2 bits (64), Expect(10) = 0.0
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -1 / -2
Query: 119 *TTCDAPASCNSSS 78
*TTCDAPASC+SS+
Sbjct: 138 *TTCDAPASCSSST 97
Score = 28.1 bits (55), Expect(6) = 1e-074
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3 / -1
Query: 153 RSSLGFEVLVVVDDMRRSCELQQQ 82
R L + + +VDDMRR ELQQQ
Sbjct: 172 RRRLRLQEVGLVDDMRRPGELQQQ 101
Score = 26.3 bits (51), Expect(8) = 0.0
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1 / +2
Query: 109 HVVYNYKDLEAEAAAAT 159
HVVY LE EAAAAT
Sbjct: 128 HVVYETDLLETEAAAAT 178
Score = 24.9 bits (48), Expect(3) = 2e-034
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 1119 NPGHSKDGVAGPQ 1157
NPG S+ G+AGP+
Sbjct: 1124 NPGDSEKGLAGPE 1162
Score = 23.5 bits (45), Expect(4) = 3e-038
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3 / -1
Query: 252 GRVGIIDPVLGGLEVVPRPEQGVDDGRRHLVRRRSSL 142
G +G + G + P + GV++ RRH RRR L
Sbjct: 265 GALGSLIQFFMGRKWYPVLKLGVENRRRHSGRRRLRL 155
Score = 23.5 bits (45), Expect(7) = 4e-098
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 658 WRLLVGSAAGSS 693
WRLL+G+ +G+S
Sbjct: 663 WRLLIGALSGAS 698
>gb|BF264866.2|BF264866 HV_CEa0010J14f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0010J14f, mRNA sequence
Length = 835
Score = 232 bits (502), Expect(3) = e-108
Identities = 84/102 (82%), Positives = 93/102 (91%)
Frame = +1 / +2
Query: 142 EAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNI 321
EA AAT VP SI++PLLRTGYHFQPP NWINDPN P+YYKGWYH FYQYNPKGAVWGNI
Sbjct: 26 EAEAATPSVPASILSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNPKGAVWGNI 205
Query: 322 VWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
+WAHSVSRDLINW+ALEPA++PSIP D+YG WSGSAT+LPDG
Sbjct: 206 IWAHSVSRDLINWMALEPAIKPSIPTDQYGVWSGSATILPDG 331
Score = 175 bits (377), Expect(2) = 1e-063
Identities = 72/94 (76%), Positives = 75/94 (79%)
Frame = -1 / -2
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 267
PSG VA+PDQ PY S GM GL AGSSA QLMRSRDTECA MLPHTAPLGLYW* KWYH
Sbjct: 330 PSGRMVAEPDQTPYWSVGMEGLMAGSSAIQLMRSRDTECAQMMLPHTAPLGLYW*NKWYH 151
Query: 266 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 165
PL* G GSLIQF+GGWKW PV SRGL M+ GT
Sbjct: 150 PL**SGPFGSLIQFMGGWKW*PVRSRGLRMEAGT 49
Score = 136 bits (291), Expect(2) = 2e-041
Identities = 58/95 (61%), Positives = 67/95 (70%)
Frame = +3 / +1
Query: 132 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 311
P RG GD A +H QPPA DG+PLP P ELDQ S+ A +LQG+VP +LP+Q QGR +
Sbjct: 16 PEPRGRGGDAVRAGLHSQPPAPDGLPLPTPHELDQRSKWAALLQGMVPLVLPVQPQGRGV 195
Query: 312 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 416
GQH +GALGV RPHQL GA AG Q HP R VR L
Sbjct: 196 GQHHLGALGVPRPHQLDGAGAGHQALHPHRPVRRL 300
Score = 126 bits (270), Expect(3) = e-108
Identities = 44/63 (69%), Positives = 54/63 (85%)
Frame = +1 / +2
Query: 448 GGPVIMYTGVDHPDINYQVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPT 627
G P ++YTG+D P NYQ+QN+A+PK+ SDPLLREWVKP +NP+ VPE G+NATQFRDPT
Sbjct: 329 GTPAMLYTGIDRPGTNYQIQNIAFPKDPSDPLLREWVKPGYNPIAVPEAGMNATQFRDPT 508
Query: 628 TAW 636
TAW
Sbjct: 509 TAW 517
Score = 89.5 bits (189), Expect(2) = 1e-063
Identities = 44/80 (55%), Positives = 47/80 (58%)
Frame = -1 / -2
Query: 686 PAALPTSSRHCSGPGPRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATF 507
P P +S S QAVVGSRN VA MP SGT GL G THSRSSGS+ G A F
Sbjct: 567 PGLSPPTSIRHSPSPACQAVVGSRNWVAFMPASGTAMGLYPGLTHSRSSGSEGSLGKAMF 388
Query: 506 WTW*LMSGWSTPVYMITGPP 447
W W*L+ G S PV I G P
Sbjct: 387 WIW*LVPGRSIPV*SIAGVP 328
Score = 74.8 bits (157), Expect(3) = e-108
Identities = 32/76 (42%), Positives = 40/76 (52%)
Frame = +1 / +2
Query: 646 GPEQWRLLVGSAAGSSPRGVAYVYXXXXXXXXXXXXXPLHSAPTGMWECPDFYPVSKGGA 825
G WR+LVG + RG+A +Y PLHSA TGMWECPDF+PV + G
Sbjct: 524 GDGLWRMLVGGLKPGTLRGMAILYRSRDFKHWVRAKHPLHSALTGMWECPDFFPVREPGH 703
Query: 826 PRAGLETSVPPGPRVK 873
PR V P +V+
Sbjct: 704 PRRA*RLQVRPALQVR 751
Score = 62.0 bits (129), Expect(3) = 4e-028
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = -3 / -1
Query: 420 GPAAVPVARDAWSERRL*RHPVDEVSRHRVRPHDVAPYGALGI 292
GP AV V D + RL RHPVDEV+ HRVRP DVAP+ ALG+
Sbjct: 304 GPDAVLVGGDGGLDGRLQRHPVDEVAGHRVRPDDVAPHRALGV 176
Score = 56.5 bits (117), Expect(3) = 4e-028
Identities = 32/81 (39%), Positives = 35/81 (43%)
Frame = -1 / -2
Query: 869 TLGPGGTDVSSPARGAPPLLTG*KSGHSHIPVGAECSGXXXXXXXXXXXXRYTYATPRGD 690
T G T RG P TG KSGHSH+PV AE SG RY A PR
Sbjct: 747 TCSAGRTWRRQARRGCPGSRTGKKSGHSHMPVSAEWSGCLARTQCLKSRLRYRMAMPRSV 568
Query: 689 DPAALPTSSRHCSGPGPRQAV 627
+ PTS RH P + V
Sbjct: 567 PGLSPPTSIRHSPSPACQAVV 505
Score = 54.7 bits (113), Expect(2) = 2e-041
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +3 / +1
Query: 465 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 563
+H PPGHQLP PE +P+ +GPAAPGVG+A
Sbjct: 346 LHRDRPPGHQLPDPEHRLPQGPLGPAAPGVGQA 444
Score = 52.4 bits (108), Expect(3) = 4e-028
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -3 / -1
Query: 246 VGIIDPVLGGLEVVPRPEQGVDDGRRHLVRRRSSL 142
+ I+DPV GGLEVV RPEQG ++G RH RRR L
Sbjct: 130 IWIVDPVHGGLEVVARPEQGAENGGRHGRRRRLGL 26
>gb|BQ764136.1|BQ764136 EBro03_SQ006_J10_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_J10 5', mRNA sequence
Length = 725
Score = 208 bits (448), Expect(4) = e-108
Identities = 80/110 (72%), Positives = 96/110 (87%)
Frame = +1 / +2
Query: 985 RLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
RL+YDYGNFYASKTFYDPAK RR+L GWANESD+ A D AKGWAGI AIPR +WLDPSGK
Sbjct: 104 RLQYDYGNFYASKTFYDPAKNRRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGK 283
Query: 1165 QLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVS 1314
QLLQWP+EE+E LR K+V++ ++V+K G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 284 QLLQWPVEELEQLRGKAVSVGDKVVKPGQHFEVTGLQSYQSDVEVSFEVA 433
Score = 139 bits (298), Expect(5) = 5e-064
Identities = 67/103 (65%), Positives = 73/103 (70%)
Frame = -1 / -3
Query: 1310 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLG 1131
TSKLTSTS C PVTS P L TL +T LS S+SS GHC+SC PLGSSH LG
Sbjct: 429 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 250
Query: 1130 MAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1002
+AW+PA PLA S A +SDSLAQP RR LAGS* VLDA*KLP
Sbjct: 249 IAWMPAHPLALSWATLSDSLAQPSSTRRFLAGS*KVLDA*KLP 121
Score = 97.3 bits (206), Expect(4) = e-108
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = +1 / +2
Query: 1294 EVSFEVSPSALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVF 1473
+V ++L AE DPA A DA++LCG+K AD + GVGPFGLWVLASA+ E+TAVF
Sbjct: 407 DVEVSFEVASLDKAEPFDPAYANDAQKLCGMKNADAKAGVGPFGLWVLASADLAEKTAVF 586
Query: 1474 FRVFKPAAGDKPVVL 1518
FRVFK G V++
Sbjct: 587 FRVFKDGYGKPLVLM 631
Score = 78.0 bits (164), Expect(4) = e-108
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1 / +2
Query: 1504 KPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKI 1614
KP+VLMC+DPTKSS P LY+PTFAGFVDTDIS+GKI
Sbjct: 614 KPLVLMCSDPTKSSLTPGLYKPTFAGFVDTDISSGKI 724
Score = 67.5 bits (141), Expect(4) = e-108
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +1 / +2
Query: 886 NSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHR 987
NSLDL RYDYYTVGTY+ R ERYVPD+P GD ++
Sbjct: 2 NSLDLTRYDYYTVGTYNNRTERYVPDNPTGDVYQ 103
Score = 63.8 bits (133), Expect(5) = 5e-064
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = -1 / -3
Query: 1613 ILPFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGL 1503
I P EMSVSTNPANVG YR G DDLVGS+HM T GL
Sbjct: 723 IFPDEMSVSTNPANVGLYRPGVRDDLVGSLHMRTRGL 613
Score = 56.5 bits (117), Expect(5) = 5e-064
Identities = 25/41 (60%), Positives = 25/41 (60%)
Frame = -1 / -3
Query: 1499 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 1377
P L TLK TAV S R AEA T P GPTP L SA F PH
Sbjct: 612 PYPSLKTLKKTAVFSARSAEARTQRPKGPTPALASAFFIPH 490
Score = 33.1 bits (66), Expect(5) = 5e-064
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -1
Query: 928 CPRCSSRTAGGRGC 887
CPRCSSR+ GRGC
Sbjct: 44 CPRCSSRSG*GRGC 3
Score = 28.6 bits (56), Expect(5) = 5e-064
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -1 / -3
Query: 974 PAGSSGTYRSALGWYVPTV 918
P G SGTYRS L VPTV
Sbjct: 90 PVGLSGTYRSVLLL*VPTV 34
>gb|CK122199.1|CK122199 BES1824102c17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C172 5-PRIME, mRNA sequence
Length = 718
Score = 280 bits (606), Expect(3) = e-101
Identities = 108/126 (85%), Positives = 115/126 (91%)
Frame = +1 / +2
Query: 835 GLETSVPPGPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFY 1014
GL+TSV GPRVKHVLKNSLDLRRYDYYTVGTY + ERYVPD+PAGDEH LRYDYGNFY
Sbjct: 146 GLDTSVVSGPRVKHVLKNSLDLRRYDYYTVGTYDRKTERYVPDNPAGDEHHLRYDYGNFY 325
Query: 1015 ASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEV 1194
ASKTFYDP KRRRILWGWANESD A DDVAKGWAGIQAIPR VWLDPSG+QL+QWP+EE+
Sbjct: 326 ASKTFYDPVKRRRILWGWANESDAAVDDVAKGWAGIQAIPRKVWLDPSGRQLMQWPVEEL 505
Query: 1195 EALRAK 1212
EALR K
Sbjct: 506 EALRGK 523
Score = 147 bits (316), Expect(5) = 1e-070
Identities = 70/98 (71%), Positives = 73/98 (74%)
Frame = -1 / -2
Query: 1211 FALSASTSSIGHCNSCFPLGSSHTVLGMAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS 1032
F LSAS+SS GHC SC PLGSS T LG+AWIPA PLATSS A SDSLAQP RMRRRL GS
Sbjct: 522 FPLSASSSSTGHCISCLPLGSSQTFLGIAWIPAHPLATSSTAASDSLAQPQRMRRRLTGS 343
Query: 1031 *NVLDA*KLPXXXXXXXXSPAGSSGTYRSALGWYVPTV 918
* VL+A*KLP SPAG SGTYRS L VPTV
Sbjct: 342 *KVLEA*KLP*S*RRWCSSPAGLSGTYRSVLRS*VPTV 229
Score = 66.1 bits (138), Expect(3) = e-101
Identities = 26/45 (57%), Positives = 27/45 (60%)
Frame = +1 / +2
Query: 697 RGVAYVYXXXXXXXXXXXXXPLHSAPTGMWECPDFYPVSKGGAPR 831
RGVAYVY PLHSAPTGMWECPD YPV+ G R
Sbjct: 5 RGVAYVYRSRDFMRWTRVRKPLHSAPTGMWECPDLYPVTADGRHR 139
Score = 64.3 bits (134), Expect(4) = 2e-032
Identities = 28/44 (63%), Positives = 30/44 (68%)
Frame = +2 / +3
Query: 1049 AASCGAGLTSPTPPPTMWPKAGLESRPFQGRCGWTPAGSSCCSG 1180
AAS GAG TSPTPP T P+ G ESR F+ R GWT G S CSG
Sbjct: 360 AASSGAGPTSPTPPSTTSPRDGPESRRFRERFGWTRVGGS*CSG 491
Score = 62.5 bits (130), Expect(3) = e-101
Identities = 24/35 (68%), Positives = 32/35 (91%)
Frame = +1 / +2
Query: 1210 KSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVS 1314
+ V++KNRV+K G HVEVTG++T+QADVEVSFEV+
Sbjct: 524 RPVSIKNRVVKRGEHVEVTGLRTSQADVEVSFEVA 628
Score = 59.3 bits (123), Expect(5) = 1e-070
Identities = 25/42 (59%), Positives = 27/42 (64%)
Frame = -1 / -2
Query: 821 PPLLTG*KSGHSHIPVGAECSGXXXXXXXXXXXXRYTYATPR 696
P +TG +SGHSHIPVGAECSG RYTYATPR
Sbjct: 129 PSAVTGYRSGHSHIPVGAECSGFLTRVHRMKSRLRYTYATPR 4
Score = 51.0 bits (105), Expect(4) = 2e-032
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +3 / +1
Query: 861 PKGEARAQEQPRPPAVRLLHRGHVPPE 941
P+GEARAQEQPRP +RLLHR H+ P+
Sbjct: 172 PQGEARAQEQPRPAPLRLLHRRHLRPQ 252
Score = 50.1 bits (103), Expect(5) = 1e-070
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -1 / -2
Query: 1310 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSS 1185
TSKLTSTSAC V PVTST P L TLFL +T +++SS
Sbjct: 624 TSKLTSTSACEVRSPVTSTCSPRLTTLFLMLTGLFPLSASSS 499
Score = 44.1 bits (90), Expect(5) = 1e-070
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / -3
Query: 928 CPRCSSRTAGGRGCS*ARASP 866
C RCSSR+ GRGCS*ARASP
Sbjct: 239 CRRCSSRSGAGRGCS*ARASP 177
Score = 42.8 bits (87), Expect(5) = 1e-070
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -1 / -2
Query: 890 LFLSTCFTLGPGGTDVSSP 834
LFLSTCFTLGP TDVSSP
Sbjct: 201 LFLSTCFTLGPDTTDVSSP 145
Score = 42.3 bits (86), Expect(4) = 2e-032
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1 / +2
Query: 1285 ADVEVSFEVSPSALAGAETLDPALAYDAERLCGVKRADVRGG 1410
+ +V +++ GAE LDPALA DA++LC ++ A V G
Sbjct: 593 SQADVEVSFEVASIDGAEALDPALANDAQKLCSMRGAHVERG 718
Score = 38.2 bits (77), Expect(4) = 2e-032
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +2 / +3
Query: 1229 TG*SRQDITSR*PGYRRHRLTWR*A 1303
TG S + TSR PGY HRLTWR*A
Sbjct: 543 TGWSSGESTSRSPGYGPHRLTWR*A 617
>gb|BI778225.2|BI778225 EBro07_SQ002_J10_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ002_J10 5', mRNA sequence
Length = 695
Score = 232 bits (502), Expect(3) = e-100
Identities = 84/102 (82%), Positives = 93/102 (91%)
Frame = +1 / +1
Query: 142 EAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNI 321
EA AAT VP SI++PLLRTGYHFQPP NWINDPN P+YYKGWYH FYQYNPKGAVWGNI
Sbjct: 52 EAEAATPSVPASILSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNPKGAVWGNI 231
Query: 322 VWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
+WAHSVSRDLINW+ALEPA++PSIP D+YG WSGSAT+LPDG
Sbjct: 232 IWAHSVSRDLINWMALEPAIKPSIPTDQYGVWSGSATILPDG 357
Score = 175 bits (377), Expect(3) = 1e-070
Identities = 72/94 (76%), Positives = 75/94 (79%)
Frame = -1 / -1
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 267
PSG VA+PDQ PY S GM GL AGSSA QLMRSRDTECA MLPHTAPLGLYW* KWYH
Sbjct: 356 PSGRMVAEPDQTPYWSVGMEGLMAGSSAIQLMRSRDTECAQMMLPHTAPLGLYW*NKWYH 177
Query: 266 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 165
PL* G GSLIQF+GGWKW PV SRGL M+ GT
Sbjct: 176 PL**SGPFGSLIQFMGGWKW*PVRSRGLRMEAGT 75
Score = 136 bits (291), Expect(2) = 2e-041
Identities = 58/95 (61%), Positives = 67/95 (70%)
Frame = +3 / +3
Query: 132 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 311
P RG GD A +H QPPA DG+PLP P ELDQ S+ A +LQG+VP +LP+Q QGR +
Sbjct: 42 PEPRGRGGDAVRAGLHSQPPAPDGLPLPTPHELDQRSKWAALLQGMVPLVLPVQPQGRGV 221
Query: 312 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 416
GQH +GALGV RPHQL GA AG Q HP R VR L
Sbjct: 222 GQHHLGALGVPRPHQLDGAGAGHQALHPHRPVRRL 326
Score = 126 bits (270), Expect(3) = e-100
Identities = 44/63 (69%), Positives = 54/63 (85%)
Frame = +1 / +1
Query: 448 GGPVIMYTGVDHPDINYQVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPT 627
G P ++YTG+D P NYQ+QN+A+PK+ SDPLLREWVKP +NP+ VPE G+NATQFRDPT
Sbjct: 355 GTPAMLYTGIDRPGTNYQIQNIAFPKDPSDPLLREWVKPGYNPIAVPEAGMNATQFRDPT 534
Query: 628 TAW 636
TAW
Sbjct: 535 TAW 543
Score = 87.7 bits (185), Expect(3) = 1e-070
Identities = 40/63 (63%), Positives = 42/63 (66%)
Frame = -1 / -1
Query: 635 QAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWTW*LMSGWSTPVYMIT 456
QAVVGSRN VA MP SGT GL G THSRSSGS+ G A FW W*L+ G S PV I
Sbjct: 542 QAVVGSRNWVAFMPASGTAMGLYPGLTHSRSSGSEGSLGKAMFWIW*LVPGRSIPV*SIA 363
Query: 455 GPP 447
G P
Sbjct: 362 GVP 354
Score = 62.0 bits (129), Expect(5) = 3e-029
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = -3 / -3
Query: 420 GPAAVPVARDAWSERRL*RHPVDEVSRHRVRPHDVAPYGALGI 292
GP AV V D + RL RHPVDEV+ HRVRP DVAP+ ALG+
Sbjct: 330 GPDAVLVGGDGGLDGRLQRHPVDEVAGHRVRPDDVAPHRALGV 202
Score = 54.7 bits (113), Expect(2) = 2e-041
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +3 / +3
Query: 465 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 563
+H PPGHQLP PE +P+ +GPAAPGVG+A
Sbjct: 372 LHRDRPPGHQLPDPEHRLPQGPLGPAAPGVGQA 470
Score = 52.4 bits (108), Expect(5) = 3e-029
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -3 / -3
Query: 246 VGIIDPVLGGLEVVPRPEQGVDDGRRHLVRRRSSL 142
+ I+DPV GGLEVV RPEQG ++G RH RRR L
Sbjct: 156 IWIVDPVHGGLEVVARPEQGAENGGRHGRRRRLGL 52
Score = 47.3 bits (97), Expect(5) = 3e-029
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / -2
Query: 319 CCPIRRPWDCIGRRNGTTPCSTWARWD 239
CCP RPW C GR +GT PCS A D
Sbjct: 229 CCPTPRPWGCTGRTSGTIPCSRAAHLD 149
Score = 46.0 bits (94), Expect(3) = e-100
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1 / +1
Query: 646 GPEQWRLLVGSAAGSSPRGVAYVYXXXXXXXXXXXXXPLHSAPTGMWE 789
G WR+LVG + RG+A +Y PLHSA TGMWE
Sbjct: 550 GDGLWRMLVGGLKPGTLRGMAILYRSRDFKHWVRAKHPLHSALTGMWE 693
Score = 44.1 bits (90), Expect(3) = 1e-070
Identities = 22/55 (40%), Positives = 25/55 (45%)
Frame = -1 / -1
Query: 791 HSHIPVGAECSGXXXXXXXXXXXXRYTYATPRGDDPAALPTSSRHCSGPGPRQAV 627
HSH+PV AECSG RY A PR + PTS RH P + V
Sbjct: 695 HSHMPVSAECSGCLARTQCLKSRLRYRMAMPRSVPGLSPPTSIRHRPSPACQAVV 531
Score = 27.6 bits (54), Expect(5) = 3e-029
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2 / -2
Query: 1735 TRRGERPCRWPATGRPWRGCR 1673
T R R RW G WR CR
Sbjct: 562 TGRRRRARRWSGRGTGWRSCR 500
Score = 21.7 bits (41), Expect(5) = 3e-029
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1 / -1
Query: 116 TTCDAPASCNSS 81
T+ DAPASC S
Sbjct: 38 TSWDAPASCRRS 3
>emb|AJ567377.2|HVU567377 Hordeum vulgare partial mRNA for
sucrose-sucrose-1-fructosyltransferase (1-sst gene)
Length = 2157
Score = 90.0 bits (190), Expect(8) = 1e-099
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +1 / +1
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 1152
LRYD G +YASK+FYDP K+RR++W E+D+ D+ KGWA +Q+IPRTV LD
Sbjct: 1078 LRYDRGKYYASKSFYDPVKKRRVVWACVGETDSERADITKGWANLQSIPRTVELD 1242
Score = 89.5 bits (189), Expect(8) = 1e-099
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +1 / +1
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVW 312
RTG+HFQP K + NDPN P+YY GWYHFFYQYNP G+VW
Sbjct: 292 RTGFHFQPDKYYQNDPNGPVYYGGWYHFFYQYNPSGSVW 408
Score = 88.1 bits (186), Expect(8) = 1e-099
Identities = 42/112 (37%), Positives = 52/112 (46%)
Frame = +1 / +1
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRGPGPEQWRLLVGS 678
QV +A P + SDPLLREWVK NPV+ P GI FRDPTTAW WR ++GS
Sbjct: 589 QVTCLAEPADPSDPLLREWVKHPANPVVFPPPGIGMKDFRDPTTAWFDASDGTWRTIIGS 768
Query: 679 AAGSSPRGVAYVYXXXXXXXXXXXXXPLHSAPTGMWECPDFYPVSKGGAPRA 834
S G+ + Y ++ P G E + GG RA
Sbjct: 769 KNDSDHSGIVFSYKTKDFVSYELMPGYMYRGPKGTGEYECIDLYAVGGGSRA 924
Score = 72.1 bits (151), Expect(5) = 4e-035
Identities = 27/38 (71%), Positives = 28/38 (73%)
Frame = -1 / -2
Query: 311 HTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKWYPV 198
HT P GLYW*KKWYHP *Y G LGS +L GWKW PV
Sbjct: 407 HTDPDGLYW*KKWYHPP*YTGPLGSFW*YLSGWKWKPV 294
Score = 56.5 bits (117), Expect(8) = 1e-099
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +1 / +1
Query: 319 IVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
IVW H+VS+DLI+W L PAL P D G +GS TVLPDG
Sbjct: 418 IVWGHAVSKDLIHWRHLPPALVPDQWYDIKGVLTGSITVLPDG 546
Score = 51.9 bits (107), Expect(8) = 1e-099
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +1 / +1
Query: 1168 LLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSALAGAETLD 1347
L+QWP+EE++ LR + L + AG V + QTAQ D E +F + SA+ D
Sbjct: 1261 LIQWPVEELDTLRINTTDLSGITVGAGSVVPLHLHQTAQLDTEATFHIDASAIEAVNEAD 1440
Score = 50.6 bits (104), Expect(5) = 4e-035
Identities = 28/73 (38%), Positives = 29/73 (39%)
Frame = -1 / -2
Query: 716 YTYATPRGDDPAALPTSSRHCSGPGPRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSG 537
Y P + P RH AVVGSR MP G TG FTHSR SG
Sbjct: 806 YEKTMPEWSESFLDPMMVRHVPSLASNHAVVGSRKSFIPMPGGGNTTGFAGCFTHSRRSG 627
Query: 536 SDTFFGYATFWTW 498
S G A TW
Sbjct: 626 SLGSAGSARHVTW 588
Score = 49.2 bits (101), Expect(5) = 4e-035
Identities = 29/64 (45%), Positives = 33/64 (51%)
Frame = -1 / -2
Query: 1151 SSHTVLGMAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLPXXXXXXXXSP 972
SS TVLG+ W AQPL S+ + S S H RR GS*N LDA* P S
Sbjct: 1241 SSSTVLGIDWRLAQPLVMSARSESVSPTHAHTTRRFFTGS*NDLDA*YFPRSYRSPTPSS 1062
Query: 971 AGSS 960
+ SS
Sbjct: 1061 SSSS 1050
Score = 48.7 bits (100), Expect(8) = 1e-099
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +1 / +1
Query: 1615 SLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNN 1743
S+R L+D S V+SF GG+ SR YP+ AI A +Y+FNN
Sbjct: 1687 SVRVLVDHSSVQSFAMGGRLTTTSRAYPTEAIYAAAGVYLFNN 1815
Score = 39.6 bits (80), Expect(5) = 4e-035
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = -1 / -2
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTM 318
PSGSTV +P P +S G AG Q +RS DT HT+
Sbjct: 545 PSGSTVMEPVSTPLMSYHWSGTKAGGRWRQWIRSLDTAWPHTI 417
Score = 37.3 bits (75), Expect(8) = 1e-099
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +1 / +1
Query: 1393 ADVRGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 1500
A RG +GPFGL VLA+ E+T V+F + K G
Sbjct: 1471 AATRGALGPFGLLVLANRALTEQTGVYFYLSKGLDG 1578
Score = 33.1 bits (66), Expect(8) = 1e-099
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1 / +1
Query: 868 VKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDD 966
V +VLK S D R+D+Y++G + A ++ P D
Sbjct: 955 VLYVLKESSDDDRHDWYSLGRFDAAANKWTPID 1053
Score = 26.7 bits (52), Expect(5) = 4e-035
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2 / -3
Query: 1741 C*TRRGERPCRWPATGRP 1688
C*T R P RWP +G P
Sbjct: 1813 C*TGRPPPPHRWPRSGTP 1760
>gb|BF625535.2|BF625535 HVSMEa0011C02f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011C02f, mRNA sequence
Length = 641
Score = 232 bits (502), Expect(2) = 2e-091
Identities = 84/102 (82%), Positives = 93/102 (91%)
Frame = +1 / +3
Query: 142 EAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNI 321
EA AAT VP SI++PLLRTGYHFQPP NWINDPN P+YYKGWYH FYQYNPKGAVWGNI
Sbjct: 114 EAEAATPSVPASILSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNPKGAVWGNI 293
Query: 322 VWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
+WAHSVSRDLINW+ALEPA++PSIP D+YG WSGSAT+LPDG
Sbjct: 294 IWAHSVSRDLINWMALEPAIKPSIPTDQYGVWSGSATILPDG 419
Score = 175 bits (377), Expect(2) = 2e-062
Identities = 72/94 (76%), Positives = 75/94 (79%)
Frame = -1 / -2
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 267
PSG VA+PDQ PY S GM GL AGSSA QLMRSRDTECA MLPHTAPLGLYW* KWYH
Sbjct: 418 PSGRMVAEPDQTPYWSVGMEGLMAGSSAIQLMRSRDTECAQMMLPHTAPLGLYW*NKWYH 239
Query: 266 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 165
PL* G GSLIQF+GGWKW PV SRGL M+ GT
Sbjct: 238 PL**SGPFGSLIQFMGGWKW*PVRSRGLRMEAGT 137
Score = 136 bits (291), Expect(2) = 2e-041
Identities = 58/95 (61%), Positives = 67/95 (70%)
Frame = +3 / +2
Query: 132 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 311
P RG GD A +H QPPA DG+PLP P ELDQ S+ A +LQG+VP +LP+Q QGR +
Sbjct: 104 PEPRGRGGDAVRAGLHSQPPAPDGLPLPTPHELDQRSKWAALLQGMVPLVLPVQPQGRGV 283
Query: 312 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 416
GQH +GALGV RPHQL GA AG Q HP R VR L
Sbjct: 284 GQHHLGALGVPRPHQLDGAGAGHQALHPHRPVRRL 388
Score = 124 bits (266), Expect(2) = 2e-091
Identities = 43/63 (68%), Positives = 53/63 (84%)
Frame = +1 / +3
Query: 448 GGPVIMYTGVDHPDINYQVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPT 627
G P ++YTG+D P NYQ+QN+A+PK+ SDPLLREWVKP +NP+ VPE G+NATQFRDPT
Sbjct: 417 GTPAMLYTGIDRPGTNYQIQNIAFPKDPSDPLLREWVKPGYNPIAVPEAGMNATQFRDPT 596
Query: 628 TAW 636
T W
Sbjct: 597 TVW 605
Score = 85.8 bits (181), Expect(2) = 2e-062
Identities = 39/63 (61%), Positives = 41/63 (65%)
Frame = -1 / -2
Query: 635 QAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWTW*LMSGWSTPVYMIT 456
Q VVGSRN VA MP SGT GL G THSRSSGS+ G A FW W*L+ G S PV I
Sbjct: 604 QTVVGSRNWVAFMPASGTAMGLYPGLTHSRSSGSEGSLGKAMFWIW*LVPGRSIPV*SIA 425
Query: 455 GPP 447
G P
Sbjct: 424 GVP 416
Score = 54.7 bits (113), Expect(2) = 2e-041
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +3 / +2
Query: 465 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 563
+H PPGHQLP PE +P+ +GPAAPGVG+A
Sbjct: 434 LHRDRPPGHQLPDPEHRLPQGPLGPAAPGVGQA 532
>gb|BE214358.2|BE214358 HV_CEb0003D11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003D11f, mRNA sequence
Length = 701
Score = 232 bits (502), Expect(2) = 5e-089
Identities = 84/102 (82%), Positives = 93/102 (91%)
Frame = +1 / +1
Query: 142 EAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNI 321
EA AAT VP SI++PLLRTGYHFQPP NWINDPN P+YYKGWYH FYQYNPKGAVWGNI
Sbjct: 154 EAEAATPSVPASILSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNPKGAVWGNI 333
Query: 322 VWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
+WAHSVSRDLINW+ALEPA++PSIP D+YG WSGSAT+LPDG
Sbjct: 334 IWAHSVSRDLINWMALEPAIKPSIPTDQYGVWSGSATILPDG 459
Score = 175 bits (377), Expect(3) = 5e-063
Identities = 72/94 (76%), Positives = 75/94 (79%)
Frame = -1 / -1
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 267
PSG VA+PDQ PY S GM GL AGSSA QLMRSRDTECA MLPHTAPLGLYW* KWYH
Sbjct: 458 PSGRMVAEPDQTPYWSVGMEGLMAGSSAIQLMRSRDTECAQMMLPHTAPLGLYW*NKWYH 279
Query: 266 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 165
PL* G GSLIQF+GGWKW PV SRGL M+ GT
Sbjct: 278 PL**SGPFGSLIQFMGGWKW*PVRSRGLRMEAGT 177
Score = 136 bits (291), Expect(2) = 2e-041
Identities = 58/95 (61%), Positives = 67/95 (70%)
Frame = +3 / +3
Query: 132 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 311
P RG GD A +H QPPA DG+PLP P ELDQ S+ A +LQG+VP +LP+Q QGR +
Sbjct: 144 PEPRGRGGDAVRAGLHSQPPAPDGLPLPTPHELDQRSKWAALLQGMVPLVLPVQPQGRGV 323
Query: 312 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 416
GQH +GALGV RPHQL GA AG Q HP R VR L
Sbjct: 324 GQHHLGALGVPRPHQLDGAGAGHQALHPHRPVRRL 428
Score = 116 bits (249), Expect(2) = 5e-089
Identities = 41/62 (66%), Positives = 52/62 (83%)
Frame = +1 / +1
Query: 448 GGPVIMYTGVDHPDINYQVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPT 627
G P ++YTG+D P NYQ+QN+A+PK+ SDPLLREWVKP +NP+ VPE G+NA QFR+PT
Sbjct: 457 GTPAMLYTGIDRPGTNYQIQNIAFPKDPSDPLLREWVKPGYNPIAVPEAGMNAPQFREPT 636
Query: 628 TA 633
TA
Sbjct: 637 TA 642
Score = 82.6 bits (174), Expect(3) = 5e-063
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = -1 / -1
Query: 635 QAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWTW*LMSGWSTPVYMIT 456
+AVVGSRN A MP SGT GL G THSRSSGS+ G A FW W*L+ G S PV I
Sbjct: 644 RAVVGSRNWGAFMPASGTAMGLYPGLTHSRSSGSEGSLGKAMFWIW*LVPGRSIPV*SIA 465
Query: 455 GPP 447
G P
Sbjct: 464 GVP 456
Score = 62.0 bits (129), Expect(3) = 2e-027
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = -3 / -3
Query: 420 GPAAVPVARDAWSERRL*RHPVDEVSRHRVRPHDVAPYGALGI 292
GP AV V D + RL RHPVDEV+ HRVRP DVAP+ ALG+
Sbjct: 432 GPDAVLVGGDGGLDGRLQRHPVDEVAGHRVRPDDVAPHRALGV 304
Score = 54.7 bits (113), Expect(2) = 2e-041
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +3 / +3
Query: 465 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 563
+H PPGHQLP PE +P+ +GPAAPGVG+A
Sbjct: 474 LHRDRPPGHQLPDPEHRLPQGPLGPAAPGVGQA 572
Score = 52.4 bits (108), Expect(3) = 2e-027
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -3 / -3
Query: 246 VGIIDPVLGGLEVVPRPEQGVDDGRRHLVRRRSSL 142
+ I+DPV GGLEVV RPEQG ++G RH RRR L
Sbjct: 258 IWIVDPVHGGLEVVARPEQGAENGGRHGRRRRLGL 154
Score = 47.3 bits (97), Expect(3) = 2e-027
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / -2
Query: 319 CCPIRRPWDCIGRRNGTTPCSTWARWD 239
CCP RPW C GR +GT PCS A D
Sbjct: 331 CCPTPRPWGCTGRTSGTIPCSRAAHLD 251
Score = 23.5 bits (45), Expect(3) = 5e-063
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / -1
Query: 116 TTCDAPASCNSSS 78
T+ DAPASC SS
Sbjct: 140 TSWDAPASCRRSS 102
>gb|BF255160.2|BF255160 HVSMEf0006B22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0006B22f, mRNA sequence
Length = 604
Score = 151 bits (325), Expect(3) = 4e-088
Identities = 58/84 (69%), Positives = 72/84 (85%)
Frame = +1 / +1
Query: 1063 GWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLKNRVIK 1242
GWANESD+ A D AKGWAGI AIPR +WLDPSGKQLLQWP+EE+E LR K+V++ ++V+K
Sbjct: 4 GWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGKQLLQWPVEELEQLRGKAVSVGDKVVK 183
Query: 1243 AGHHVEVTGIQTAQADVEVSFEVS 1314
G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 184 PGQHFEVTGLQSYQSDVEVSFEVA 255
Score = 114 bits (243), Expect(3) = 4e-088
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1 / +1
Query: 1504 KPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGK 1671
KP+VLMC+DPTKSS P LY+PTFAGFVDTDIS+GKISLR LIDRSVVESF AGGK
Sbjct: 436 KPLVLMCSDPTKSSLTPGLYKPTFAGFVDTDISSGKISLRKLIDRSVVESFXAGGK 603
Score = 112 bits (240), Expect(3) = 6e-058
Identities = 52/83 (62%), Positives = 58/83 (69%)
Frame = -1 / -3
Query: 1310 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLG 1131
TSKLTSTS C PVTS P L TL +T LS S+SS GHC+SC PLGSSH LG
Sbjct: 251 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 72
Query: 1130 MAWIPAQPLATSSAAVSDSLAQP 1062
+AW+PA PLA S A +SDSLAQP
Sbjct: 71 IAWMPAHPLALSWATLSDSLAQP 3
Score = 100 bits (212), Expect(3) = 4e-088
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +1 / +1
Query: 1294 EVSFEVSPSALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVF 1473
+V ++L AE DPA A DA++LCG+K AD +GGVGPFGLWVLASA+ E+TAVF
Sbjct: 229 DVEVSFEVASLDKAEPFDPAYANDAQKLCGMKNADAKGGVGPFGLWVLASADLAEKTAVF 408
Query: 1474 FRVFKPAAGDKPVVL 1518
FRVFK G V++
Sbjct: 409 FRVFKDGYGKPLVLM 453
Score = 91.8 bits (194), Expect(3) = 6e-058
Identities = 40/55 (72%), Positives = 44/55 (80%)
Frame = -1 / -3
Query: 1667 PPAPKLSTTDRSIRLLRDILPFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGL 1503
PPA KLSTT+RSI L++I P EMSVSTNPANVG YR G DDLVGS+HM T GL
Sbjct: 599 PPAXKLSTTERSISFLKEIFPDEMSVSTNPANVGLYRPGVRDDLVGSLHMRTRGL 435
Score = 60.2 bits (125), Expect(3) = 6e-058
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -1 / -3
Query: 1499 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 1377
P L TLK TAV S R AEA T P GPTPPL SA F PH
Sbjct: 434 PYPSLKTLKKTAVFSARSAEARTQRPKGPTPPLASAFFIPH 312
>emb|X83233.1|HVSF6FT Hordeum vulgare mRNA for sucrose:fructan 6-fructosyltransferase
Length = 2091
Score = 91.3 bits (193), Expect(9) = 7e-086
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +1 / +1
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 1152
LRYD+G FYAS +FYDPAK RR+L G+ E D+ DV KGWA IQ++PRTV LD
Sbjct: 1063 LRYDWGKFYASTSFYDPAKNRRVLMGYVGEVDSKRADVVKGWASIQSVPRTVALD 1227
Score = 80.8 bits (170), Expect(9) = 7e-086
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +1 / +1
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVW 312
R+GYHFQ KN+++DPN MYY+GWYH FYQYNP G W
Sbjct: 289 RSGYHFQTAKNYMSDPNGLMYYRGWYHMFYQYNPVGTDW 405
Score = 71.6 bits (150), Expect(9) = 7e-086
Identities = 29/60 (48%), Positives = 35/60 (58%)
Frame = +1 / +1
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRGPGPEQWRLLVGS 678
+VQ +A P + +DPLLR W K NPVI G+ FRDP TAW E WR L+GS
Sbjct: 589 EVQCIATPADPNDPLLRRWTKHPANPVIWSPPGVGTKDFRDPMTAWYDESDETWRTLLGS 768
Score = 60.2 bits (125), Expect(5) = 2e-024
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = -1 / -2
Query: 308 TAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKWYPV 198
+ P GLYW* WYHP *Y+ LGSL+ FL WKW P+
Sbjct: 401 SVPTGLYW*NMWYHPR*YIRPLGSLM*FLAVWKW*PL 291
Score = 51.0 bits (105), Expect(9) = 7e-086
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +1 / +1
Query: 1168 LLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVSPSALAGAETLD 1347
LL WP+EE+E LR + L + I G + + Q Q D+E SF + SA+A D
Sbjct: 1246 LLLWPVEEIETLRLNATELTDVTINTGSVIHIPLRQGTQLDIEASFHLDASAVAALNEAD 1425
Score = 46.0 bits (94), Expect(9) = 7e-086
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1 / +1
Query: 874 HVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
HVLK S+D R+DYY++GTY A + P DP D
Sbjct: 946 HVLKASMDDERHDYYSLGTYDSAANTWTPIDPELD 1050
Score = 45.5 bits (93), Expect(5) = 2e-024
Identities = 23/58 (39%), Positives = 25/58 (43%)
Frame = -1 / -2
Query: 674 PTSSRHCSGPGPRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWT 501
P RH S QAV+GSR + P MTGL H R GS G A WT
Sbjct: 764 PRRVRHVSSDSSYQAVIGSRKSLVPTPGGDQMTGLAGCLVHRRRRGSLGSAGVAMHWT 591
Score = 42.3 bits (86), Expect(9) = 7e-086
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1 / +1
Query: 1612 ISLRSLIDRSVVESFGAGGKTCILSRVYP 1698
+S+R L+D S+V+ F GG+T + SRVYP
Sbjct: 1672 LSMRVLVDHSIVQGFDMGGRTTMTSRVYP 1758
Score = 42.3 bits (86), Expect(9) = 7e-086
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1 / +1
Query: 325 WAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
W H+VSR+L+ W L A+ D G SGS TVLP+G
Sbjct: 421 WGHAVSRNLVQWRTLPIAMVADQWYDILGVLSGSMTVLPNG 543
Score = 40.9 bits (83), Expect(5) = 2e-024
Identities = 24/50 (48%), Positives = 27/50 (54%)
Frame = -1 / -2
Query: 1151 SSHTVLGMAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1002
S TVLG + A PL TS+ S S P RR LAGS* +DA* P
Sbjct: 1226 SRATVLGTD*MEAHPLTTSARLESTSPTYPMSTRRFLAGS*KEVDA*NFP 1077
Score = 31.8 bits (63), Expect(9) = 7e-086
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1 / +1
Query: 775 TGMWECPDFYPVSK 816
TG WEC DFYPV +
Sbjct: 874 TGEWECIDFYPVGR 915
Score = 30.4 bits (60), Expect(9) = 7e-086
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1 / +1
Query: 1402 RGGVGPFGLWVLASANRK 1455
RG +GPFGL VLA+ +R+
Sbjct: 1465 RGALGPFGLLVLAAGDRR 1518
Score = 29.9 bits (59), Expect(5) = 2e-024
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1 / -2
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTM 318
P GSTV +P++ P +S A R RDT H+M
Sbjct: 542 PLGSTVMEPERTPRMSYHWSATMAIGRVRHWTRFRDTAWPHSM 414
Score = 24.4 bits (47), Expect(5) = 2e-024
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -2
Query: 809 TG*KSGHSHIPV 774
TG*KS HSH PV
Sbjct: 908 TG*KSMHSHSPV 873
>gb|BU994370.1|BU994370 HM06N08r HM Hordeum vulgare subsp. vulgare cDNA clone HM06N08
5-PRIME, mRNA sequence
Length = 590
Score = 248 bits (536), Expect(3) = 3e-084
Identities = 94/109 (86%), Positives = 100/109 (91%)
Frame = +1 / +3
Query: 886 NSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDPAKRRRILWG 1065
NSLDLRRYDYYTVGTY + ERYVPD+PAGDEH LRYDYGNFYASKTFYDP KRRRILWG
Sbjct: 12 NSLDLRRYDYYTVGTYDRKTERYVPDNPAGDEHHLRYDYGNFYASKTFYDPVKRRRILWG 191
Query: 1066 WANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAK 1212
WANESD A DDVAKGWAGIQAIPR VWLDPSG+QL+QWP+EE+EALR K
Sbjct: 192 WANESDAAVDDVAKGWAGIQAIPRKVWLDPSGRQLMQWPVEELEALRGK 338
Score = 147 bits (316), Expect(4) = 3e-053
Identities = 70/98 (71%), Positives = 73/98 (74%)
Frame = -1 / -2
Query: 1211 FALSASTSSIGHCNSCFPLGSSHTVLGMAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS 1032
F LSAS+SS GHC SC PLGSS T LG+AWIPA PLATSS A SDSLAQP RMRRRL GS
Sbjct: 337 FPLSASSSSTGHCISCLPLGSSQTFLGIAWIPAHPLATSSTAASDSLAQPQRMRRRLTGS 158
Query: 1031 *NVLDA*KLPXXXXXXXXSPAGSSGTYRSALGWYVPTV 918
* VL+A*KLP SPAG SGTYRS L VPTV
Sbjct: 157 *KVLEA*KLP*S*RRWCSSPAGLSGTYRSVLRS*VPTV 44
Score = 64.3 bits (134), Expect(4) = 9e-025
Identities = 28/44 (63%), Positives = 30/44 (68%)
Frame = +2 / +1
Query: 1049 AASCGAGLTSPTPPPTMWPKAGLESRPFQGRCGWTPAGSSCCSG 1180
AAS GAG TSPTPP T P+ G ESR F+ R GWT G S CSG
Sbjct: 175 AASSGAGPTSPTPPSTTSPRDGPESRRFRERFGWTRVGGS*CSG 306
Score = 62.5 bits (130), Expect(3) = 3e-084
Identities = 24/35 (68%), Positives = 32/35 (91%)
Frame = +1 / +3
Query: 1210 KSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVS 1314
+ V++KNRV+K G HVEVTG++T+QADVEVSFEV+
Sbjct: 339 RPVSIKNRVVKRGEHVEVTGLRTSQADVEVSFEVA 443
Score = 50.1 bits (103), Expect(4) = 3e-053
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -1 / -2
Query: 1310 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSS 1185
TSKLTSTSAC V PVTST P L TLFL +T +++SS
Sbjct: 439 TSKLTSTSACEVRSPVTSTCSPRLTTLFLMLTGLFPLSASSS 314
Score = 42.3 bits (86), Expect(3) = 3e-084
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +1 / +2
Query: 1408 GVGPFGLWVLASANRKERTAV 1470
GVGPFGLWVLAS+ +E+TAV
Sbjct: 527 GVGPFGLWVLASSKLEEKTAV 589
Score = 38.2 bits (77), Expect(4) = 9e-025
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +2 / +1
Query: 1229 TG*SRQDITSR*PGYRRHRLTWR*A 1303
TG S + TSR PGY HRLTWR*A
Sbjct: 358 TGWSSGESTSRSPGYGPHRLTWR*A 432
Score = 36.3 bits (73), Expect(4) = 3e-053
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = -1 / -3
Query: 1469 TAVLSLRLAEASTHSPNGPTP 1407
TAV S L EASTH P GPTP
Sbjct: 588 TAVFSSSLDEASTHRPKGPTP 526
Score = 34.5 bits (69), Expect(4) = 9e-025
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3 / +2
Query: 882 QEQPRPPAVRLLHRGHVPPE 941
+EQPRP +RLLHR H+ P+
Sbjct: 8 REQPRPAPLRLLHRRHLRPQ 67
Score = 32.7 bits (65), Expect(4) = 3e-053
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 928 CPRCSSRTAGGRGCS 884
C RCSSR+ GRGCS
Sbjct: 54 CRRCSSRSGAGRGCS 10
Score = 32.7 bits (65), Expect(4) = 9e-025
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1 / +3
Query: 1285 ADVEVSFEVSPSALAGAETLDPALAYDAERL 1377
+ +V +++ GAE LDPALA DA++L
Sbjct: 408 SQADVEVSFEVASIDGAEALDPALANDAQKL 500
>gb|BF260173.2|BF260173 HVSMEf0021E20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0021E20f, mRNA sequence
Length = 790
Score = 203 bits (437), Expect(3) = 7e-081
Identities = 84/104 (80%), Positives = 92/104 (88%)
Frame = +1 / +3
Query: 1504 KPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCIL 1683
KP+VLMC+DPTKSS P LY+PTFAGFVDTDIS+GKISLRSLIDRSVVESFGAGGKTCIL
Sbjct: 246 KPLVLMCSDPTKSSLTPGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCIL 425
Query: 1684 SRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMNGA* 1815
SRVYP +AIGKDA LYVFNNG K S+L AWE+ KP+MNGA*
Sbjct: 426 SRVYPXMAIGKDAHLYVFNNGETDFKGSQLKAWEINKPMMNGA* 557
Score = 157 bits (337), Expect(3) = 1e-051
Identities = 71/103 (68%), Positives = 79/103 (76%)
Frame = -1 / -1
Query: 1811 APFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRS 1632
APF+ G ISHA+ D L PLLNT*R AS P+A G TLERMQV PPAPKLSTT+RS
Sbjct: 553 APFIMGLLISHALSWDPLKSVSPLLNT*RCASFPIAMXGYTLERMQVFPPAPKLSTTERS 374
Query: 1631 IRLLRDILPFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGL 1503
I+LL++I P EMSVSTNPANVG YR G DDLVGS+HM T GL
Sbjct: 373 IKLLKEIFPDEMSVSTNPANVGLYRPGVRDDLVGSLHMRTRGL 245
Score = 100 bits (212), Expect(3) = 7e-081
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +1 / +3
Query: 1294 EVSFEVSPSALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVF 1473
+V ++L AE DPA A DA++LCG+K AD +GGVGPFGLWVLASA+ E+TAVF
Sbjct: 39 DVEVSFEVASLDKAEPFDPAYANDAQKLCGMKNADAKGGVGPFGLWVLASADLAEKTAVF 218
Query: 1474 FRVFKPAAGDKPVVL 1518
FRVFK G V++
Sbjct: 219 FRVFKDGYGKPLVLM 263
Score = 60.2 bits (125), Expect(3) = 1e-051
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -1 / -1
Query: 1499 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 1377
P L TLK TAV S R AEA T P GPTPPL SA F PH
Sbjct: 244 PYPSLKTLKKTAVFSARSAEARTQRPKGPTPPLASAFFIPH 122
Score = 38.6 bits (78), Expect(3) = 7e-081
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +1 / +3
Query: 1252 HVEVTGIQTAQADVEVSFEVS 1314
H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 3 HFEVTGLQSYQSDVEVSFEVA 65
Score = 26.3 bits (51), Expect(3) = 1e-051
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -1 / -1
Query: 1310 TSKLTSTSACAVCIPVTS 1257
TSKLTSTS C PVTS
Sbjct: 61 TSKLTSTSDW*DCRPVTS 8
>emb|A48280.1| Sequence 1 from Patent WO9601904
Length = 2094
Score = 91.3 bits (193), Expect(9) = 1e-080
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = +1 / +1
Query: 988 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 1152
LRYD+G FYAS +FYDPAK RR+L G+ E D+ DV KGWA IQ++PRTV LD
Sbjct: 1063 LRYDWGKFYASTSFYDPAKNRRVLMGYVGEVDSKRADVVKGWASIQSVPRTVALD 1227
Score = 80.8 bits (170), Expect(9) = 1e-080
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +1 / +1
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVW 312
R+GYHFQ KN+++DPN MYY+GWYH FYQYNP G W
Sbjct: 289 RSGYHFQTAKNYMSDPNGLMYYRGWYHMFYQYNPVGTDW 405
Score = 71.6 bits (150), Expect(9) = 1e-080
Identities = 29/60 (48%), Positives = 35/60 (58%)
Frame = +1 / +1
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRGPGPEQWRLLVGS 678
+VQ +A P + +DPLLR W K NPVI G+ FRDP TAW E WR L+GS
Sbjct: 589 EVQCIATPADPNDPLLRRWTKHPANPVIWSPPGVGTKDFRDPMTAWYDESDETWRTLLGS 768
Score = 60.2 bits (125), Expect(5) = 2e-024
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = -1 / -2
Query: 308 TAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKWYPV 198
+ P GLYW* WYHP *Y+ LGSL+ FL WKW P+
Sbjct: 401 SVPTGLYW*NMWYHPR*YIRPLGSLM*FLAVWKW*PL 291
Score = 46.0 bits (94), Expect(9) = 1e-080
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1 / +1
Query: 874 HVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 978
HVLK S+D R+DYY++GTY A + P DP D
Sbjct: 946 HVLKASMDDERHDYYSLGTYDSAANTWTPIDPELD 1050
Score = 45.5 bits (93), Expect(5) = 2e-024
Identities = 23/58 (39%), Positives = 25/58 (43%)
Frame = -1 / -2
Query: 674 PTSSRHCSGPGPRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWT 501
P RH S QAV+GSR + P MTGL H R GS G A WT
Sbjct: 764 PRRVRHVSSDSSYQAVIGSRKSLVPTPGGDQMTGLAGCLVHRRRRGSLGSAGVAMHWT 591
Score = 42.3 bits (86), Expect(9) = 1e-080
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +1 / +1
Query: 1612 ISLRSLIDRSVVESFGAGGKTCILSRVYP 1698
+S+R L+D S+V+ F GG+T + SRVYP
Sbjct: 1675 LSMRVLVDHSIVQGFDMGGRTTMTSRVYP 1761
Score = 42.3 bits (86), Expect(9) = 1e-080
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1 / +1
Query: 325 WAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
W H+VSR+L+ W L A+ D G SGS TVLP+G
Sbjct: 421 WGHAVSRNLVQWRTLPIAMVADQWYDILGVLSGSMTVLPNG 543
Score = 40.9 bits (83), Expect(5) = 2e-024
Identities = 24/50 (48%), Positives = 27/50 (54%)
Frame = -1 / -2
Query: 1151 SSHTVLGMAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1002
S TVLG + A PL TS+ S S P RR LAGS* +DA* P
Sbjct: 1226 SRATVLGTD*MEAHPLTTSARLESTSPTYPMSTRRFLAGS*KEVDA*NFP 1077
Score = 33.1 bits (66), Expect(9) = 1e-080
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1 / +1
Query: 1168 LLQWPIEEVEALRAKSVTLKNRVIKAGHHVEV 1263
LL WP+EE+E LR + L + I G + +
Sbjct: 1246 LLLWPVEEIETLRLNATELTDVTINTGSVIHI 1341
Score = 31.8 bits (63), Expect(9) = 1e-080
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1 / +1
Query: 775 TGMWECPDFYPVSK 816
TG WEC DFYPV +
Sbjct: 874 TGEWECIDFYPVGR 915
Score = 30.4 bits (60), Expect(9) = 1e-080
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1 / +1
Query: 1402 RGGVGPFGLWVLASANRK 1455
RG +GPFGL VLA+ +R+
Sbjct: 1468 RGALGPFGLLVLAAGDRR 1521
Score = 29.9 bits (59), Expect(5) = 2e-024
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1 / -2
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTM 318
P GSTV +P++ P +S A R RDT H+M
Sbjct: 542 PLGSTVMEPERTPRMSYHWSATMAIGRVRHWTRFRDTAWPHSM 414
Score = 24.4 bits (47), Expect(5) = 2e-024
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -2
Query: 809 TG*KSGHSHIPV 774
TG*KS HSH PV
Sbjct: 908 TG*KSMHSHSPV 873
>gb|BQ762965.1|BQ762965 EBro02_SQ006_O16_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ006_O16 5', mRNA sequence
Length = 557
Score = 200 bits (431), Expect(3) = 9e-080
Identities = 77/106 (72%), Positives = 92/106 (86%)
Frame = +1 / +2
Query: 997 DYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQ 1176
DYGNFYASKTFYDPAK RR+L GWANESD+ A D AKGWAGI AIPR +WLDPSGKQLLQ
Sbjct: 2 DYGNFYASKTFYDPAKNRRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGKQLLQ 181
Query: 1177 WPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVS 1314
WP+EE+E LR K+V++ ++V+K G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 182 WPVEELEQLRGKAVSVGDKVVKPGQHFEVTGLQSYQSDVEVSFEVA 319
Score = 139 bits (298), Expect(3) = 1e-047
Identities = 67/103 (65%), Positives = 73/103 (70%)
Frame = -1 / -3
Query: 1310 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLG 1131
TSKLTSTS C PVTS P L TL +T LS S+SS GHC+SC PLGSSH LG
Sbjct: 315 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 136
Query: 1130 MAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1002
+AW+PA PLA S A +SDSLAQP RR LAGS* VLDA*KLP
Sbjct: 135 IAWMPAHPLALSWATLSDSLAQPSSTRRFLAGS*KVLDA*KLP 7
Score = 100 bits (212), Expect(3) = 9e-080
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +1 / +2
Query: 1294 EVSFEVSPSALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVF 1473
+V ++L AE DPA A DA++LCG+K AD +GGVGPFGLWVLASA+ E+TAVF
Sbjct: 293 DVEVSFEVASLDKAEPFDPAYANDAQKLCGMKNADAKGGVGPFGLWVLASADLAEKTAVF 472
Query: 1474 FRVFKPAAGDKPVVL 1518
FRVFK G V++
Sbjct: 473 FRVFKDGYGKPLVLM 517
Score = 60.2 bits (125), Expect(3) = 1e-047
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -1 / -3
Query: 1499 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 1377
P L TLK TAV S R AEA T P GPTPPL SA F PH
Sbjct: 498 PYPSLKTLKKTAVFSARSAEARTQRPKGPTPPLASAFFIPH 376
Score = 37.7 bits (76), Expect(3) = 9e-080
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1 / +2
Query: 1504 KPVVLMCTDPTKSSQNPNL 1560
KP+VLMC+DPTKSS P L
Sbjct: 500 KPLVLMCSDPTKSSLTPGL 556
Score = 30.4 bits (60), Expect(3) = 1e-047
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -1 / -3
Query: 1559 RFGFWDDLVGSVHMSTTGL 1503
R G DDLVGS+HM T GL
Sbjct: 555 RPGVRDDLVGSLHMRTRGL 499
>gb|AV924971.1|AV924971 AV924971 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd17l01 5', mRNA sequence
Length = 577
Score = 208 bits (448), Expect(3) = 2e-077
Identities = 80/110 (72%), Positives = 96/110 (87%)
Frame = +1 / +2
Query: 985 RLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
RL+YDYGNFYASKTFYDPAK RR+L GWANESD+ A D AKGWAGI AIPR +WLDPSGK
Sbjct: 41 RLQYDYGNFYASKTFYDPAKNRRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGK 220
Query: 1165 QLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVS 1314
QLLQWP+EE+E LR K+V++ ++V+K G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 221 QLLQWPVEELEQLRGKAVSVGDKVVKPGQHFEVTGLQSYQSDVEVSFEVA 370
Score = 139 bits (298), Expect(2) = 5e-044
Identities = 67/103 (65%), Positives = 73/103 (70%)
Frame = -1 / -2
Query: 1310 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLG 1131
TSKLTSTS C PVTS P L TL +T LS S+SS GHC+SC PLGSSH LG
Sbjct: 366 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 187
Query: 1130 MAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1002
+AW+PA PLA S A +SDSLAQP RR LAGS* VLDA*KLP
Sbjct: 186 IAWMPAHPLALSWATLSDSLAQPSSTRRFLAGS*KVLDA*KLP 58
Score = 100 bits (212), Expect(3) = 2e-077
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +1 / +2
Query: 1294 EVSFEVSPSALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVF 1473
+V ++L AE DPA A DA++LCG+K AD +GGVGPFGLWVLASA+ E+TAVF
Sbjct: 344 DVEVSFEVASLDKAEPFDPAYANDAQKLCGMKNADAKGGVGPFGLWVLASADLAEKTAVF 523
Query: 1474 FRVFKPAAGDKPVVL 1518
FRVFK G V++
Sbjct: 524 FRVFKDGYGKPLVLM 568
Score = 60.2 bits (125), Expect(2) = 5e-044
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -1 / -2
Query: 1499 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 1377
P L TLK TAV S R AEA T P GPTPPL SA F PH
Sbjct: 549 PYPSLKTLKKTAVFSARSAEARTQRPKGPTPPLASAFFIPH 427
Score = 22.1 bits (42), Expect(3) = 2e-077
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 1504 KPVVLMCTD 1530
KP+VLMC+D
Sbjct: 551 KPLVLMCSD 577
>gb|BU973477.1|BU973477 HB25B07r BC Hordeum vulgare subsp. vulgare cDNA clone HB25B07
5-PRIME, mRNA sequence
Length = 477
Score = 197 bits (424), Expect(2) = 1e-070
Identities = 79/99 (79%), Positives = 91/99 (91%)
Frame = +1 / +1
Query: 1492 AAGDKPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGK 1671
+ +KPVVLMC+DPT SS NPNLY+PTFAGFVDTDI+ GKISLRSLIDRSVVESFGAGG+
Sbjct: 181 STNNKPVVLMCSDPTMSSLNPNLYKPTFAGFVDTDIAKGKISLRSLIDRSVVESFGAGGR 360
Query: 1672 TCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEM 1788
TCILSRVYP+LA+GK+ARL+VFNNG+ +KVS LTAWEM
Sbjct: 361 TCILSRVYPTLALGKNARLHVFNNGKVDIKVSELTAWEM 477
Score = 166 bits (356), Expect(2) = 2e-051
Identities = 76/95 (80%), Positives = 77/95 (81%)
Frame = -1 / -2
Query: 1787 ISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRSIRLLRDIL 1608
ISHAV DTL LPLL T*RRA LP AS G*T ERMQVLPPAPKLSTTDRSIRLLRDIL
Sbjct: 476 ISHAVSSDTLMSTLPLLKT*RRAFLPSASVG*TRERMQVLPPAPKLSTTDRSIRLLRDIL 297
Query: 1607 PFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGL 1503
P MSVST PA VG YRFGF DD+VGS HM TTGL
Sbjct: 296 PLAMSVSTKPAKVGLYRFGFRDDMVGSEHMRTTGL 192
Score = 104 bits (222), Expect = 2e-021
Identities = 45/73 (61%), Positives = 52/73 (71%)
Frame = +3 / +3
Query: 1569 DICRICRHGHLERQDIPEKPDRPIGR*ELRSRGQDLHPLQGLPVAGHRQGRSPLRVQQRE 1748
D+ R+C H H + QDI EKPDR + R ELR RGQDLHPL GLP A Q RSP R+QQR+
Sbjct: 258 DLRRLC*H*HSQGQDISEKPDRSVRRGELRGRGQDLHPLPGLPDARAGQERSPSRLQQRQ 437
Query: 1749 GARQGVPSHRVGD 1787
G QGV +H VGD
Sbjct: 438 GGHQGVGAHGVGD 476
Score = 103 bits (219), Expect(2) = 6e-031
Identities = 48/76 (63%), Positives = 56/76 (73%)
Frame = -3 / -1
Query: 1788 HLPRGETGHLDVRPPVVEHVEASVLADGQRRVDPGEDAGLAPGSEALNDRSVDQASQGYL 1609
HLPR E HLDV VVE V+ASVLA +RRVDPGEDAG AP EAL+D +DQASQ YL
Sbjct: 477 HLPRRELRHLDVHLAVVEDVKASVLAQRERRVDPGEDAGPAPCPEALHDGPIDQASQRYL 298
Query: 1608 AVRDVRVDKSCKCRAV 1561
A+ V V+K+C+ R V
Sbjct: 297 ALGYVSVNKACEGRLV 250
Score = 91.8 bits (194), Expect(2) = 1e-070
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = +1 / +1
Query: 1336 ETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPA 1494
E LDPALA DA++LC ++ A V GGVGPFGLWVLAS+ +E+TAVFFRVFK A
Sbjct: 10 EALDPALANDAQKLCSMRGAHVEGGVGPFGLWVLASSKLEEKTAVFFRVFKAA 168
Score = 58.3 bits (121), Expect(2) = 2e-051
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = -3 / -1
Query: 1491 GLEHPEEHRGSLLAVGGGQHPQPERPHAAPHVRALHAAQ 1375
GLEHPEE R LL +G G+HPQ E HAA HV HAAQ
Sbjct: 165 GLEHPEEDRRLLLQLGRGEHPQAEGAHAAFHVGTPHAAQ 49
Score = 52.4 bits (108), Expect(2) = 6e-031
Identities = 24/39 (61%), Positives = 24/39 (61%)
Frame = -1 / -2
Query: 1493 AGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 1377
A LNT K TAV S L EASTH P GPTPP T A H
Sbjct: 167 AALNTRKKTAVFSSSLDEASTHRPKGPTPPSTWAPLMLH 51
>gb|BF064963.3|BF064963 HV_CEb0022D03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022D03f, mRNA sequence
Length = 690
Score = 214 bits (461), Expect(2) = 2e-070
Identities = 88/104 (84%), Positives = 96/104 (92%)
Frame = +1 / +1
Query: 1504 KPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCIL 1683
KP+VLMC+DPTKSS P LY+PTFAGFVDTDIS+GKISLRSLIDRSVVESFGAGGKTCIL
Sbjct: 121 KPLVLMCSDPTKSSLTPGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCIL 300
Query: 1684 SRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMNGA* 1815
SRVYPS+AIGKDA LYVFNNG +KVS+L AWEMKKP+MNGA*
Sbjct: 301 SRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEMKKPMMNGA* 432
Score = 168 bits (362), Expect(2) = 7e-051
Identities = 75/103 (72%), Positives = 83/103 (80%)
Frame = -1 / -2
Query: 1811 APFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRS 1632
APF+ GFFISHA+ DTL PLLNT*R AS P+A DG TLERMQV PPAPKLSTT+RS
Sbjct: 428 APFIMGFFISHALSWDTLISVSPLLNT*RCASFPIAMDGYTLERMQVFPPAPKLSTTERS 249
Query: 1631 IRLLRDILPFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGL 1503
I+LL++I P EMSVSTNPANVG YR G DDLVGS+HM T GL
Sbjct: 248 IKLLKEIFPDEMSVSTNPANVGLYRPGVRDDLVGSLHMRTRGL 120
Score = 73.9 bits (155), Expect(2) = 2e-070
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = +1 / +1
Query: 1381 GVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPAAGDKPVVL 1518
G+K AD +GGVGPFGLWVLASA+ E+TAVFFRVFK G V++
Sbjct: 1 GMKNADAKGGVGPFGLWVLASADLAEKTAVFFRVFKDGYGKPLVLM 138
Score = 53.8 bits (111), Expect(2) = 7e-051
Identities = 24/38 (63%), Positives = 24/38 (63%)
Frame = -1 / -2
Query: 1499 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARF 1386
P L TLK TAV S R AEA T P GPTPPL SA F
Sbjct: 119 PYPSLKTLKKTAVFSARSAEARTQRPKGPTPPLASAFF 6
>gb|BE559132.2|BE559132 HV_CEb0023A11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023A11f, mRNA sequence
Length = 533
Score = 164 bits (353), Expect(3) = 2e-070
Identities = 63/96 (65%), Positives = 79/96 (82%)
Frame = +1 / +2
Query: 1027 FYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALR 1206
FY P + R+L GWANESD+ A D AKGWAGI AIPR +WLDPSGKQLLQWP+EE+E LR
Sbjct: 2 FYXPGQEPRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGKQLLQWPVEELEQLR 181
Query: 1207 AKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVS 1314
K+V++ ++V+K G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 182 GKAVSVGDKVVKPGQHFEVTGLQSYQSDVEVSFEVA 289
Score = 116 bits (247), Expect(3) = 1e-041
Identities = 56/94 (59%), Positives = 62/94 (65%)
Frame = -1 / -3
Query: 1310 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLG 1131
TSKLTSTS C PVTS P L TL +T LS S+SS GHC+SC PLGSSH LG
Sbjct: 285 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 106
Query: 1130 MAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS* 1029
+AW+PA PLA S A +SDSLAQP R GS*
Sbjct: 105 IAWMPAHPLALSWATLSDSLAQPSSTRGSWPGS* 4
Score = 100 bits (212), Expect(3) = 2e-070
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +1 / +2
Query: 1294 EVSFEVSPSALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVF 1473
+V ++L AE DPA A DA++LCG+K AD +GGVGPFGLWVLASA+ E+TAVF
Sbjct: 263 DVEVSFEVASLDKAEPFDPAYANDAQKLCGMKNADAKGGVGPFGLWVLASADLAEKTAVF 442
Query: 1474 FRVFKPAAGDKPVVL 1518
FRVFK G V++
Sbjct: 443 FRVFKDGYGKPLVLM 487
Score = 60.2 bits (125), Expect(3) = 1e-041
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = -1 / -3
Query: 1499 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 1377
P L TLK TAV S R AEA T P GPTPPL SA F PH
Sbjct: 468 PYPSLKTLKKTAVFSARSAEARTQRPKGPTPPLASAFFIPH 346
Score = 41.8 bits (85), Expect(3) = 2e-070
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1 / +2
Query: 1504 KPVVLMCTDPTKSSQNPNLYR 1566
KP+VLMC+DPTKSS P LY+
Sbjct: 470 KPLVLMCSDPTKSSLTPGLYK 532
Score = 33.6 bits (67), Expect(3) = 1e-041
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1 / -3
Query: 1562 YRFGFWDDLVGSVHMSTTGL 1503
YR G DDLVGS+HM T GL
Sbjct: 528 YRPGVRDDLVGSLHMRTRGL 469
>gb|BU996678.1|BU996678 HM14G07r HM Hordeum vulgare subsp. vulgare cDNA clone HM14G07
5-PRIME, mRNA sequence
Length = 540
Score = 183 bits (394), Expect(2) = 1e-068
Identities = 74/94 (78%), Positives = 86/94 (91%)
Frame = +1 / +1
Query: 1492 AAGDKPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGK 1671
+ +KPVVLMC+DPT SS NPNLY+PTFAGFVDTDI+ GKISLRSLIDRSVVESFGAGG+
Sbjct: 259 STNNKPVVLMCSDPTMSSLNPNLYKPTFAGFVDTDIAKGKISLRSLIDRSVVESFGAGGR 438
Query: 1672 TCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRL 1773
TCILSRVYP+LA+GK+ARL+VFNNG+ +KVS L
Sbjct: 439 TCILSRVYPTLALGKNARLHVFNNGKVDIKVSEL 540
Score = 155 bits (334), Expect(3) = 7e-051
Identities = 71/88 (80%), Positives = 72/88 (81%)
Frame = -1 / -2
Query: 1766 DTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRSIRLLRDILPFEMSVS 1587
DTL LPLL T*RRA LP AS G*T ERMQVLPPAPKLSTTDRSIRLLRDILP MSVS
Sbjct: 533 DTLMSTLPLLKT*RRAFLPSASVG*TRERMQVLPPAPKLSTTDRSIRLLRDILPLAMSVS 354
Query: 1586 TNPANVGRYRFGFWDDLVGSVHMSTTGL 1503
T PA VG YRFGF DD+VGS HM TTGL
Sbjct: 353 TKPAKVGLYRFGFRDDMVGSEHMRTTGL 270
Score = 98.7 bits (209), Expect(2) = 1e-068
Identities = 40/70 (57%), Positives = 52/70 (74%)
Frame = +1 / +1
Query: 1285 ADVEVSFEVSPSALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERT 1464
+ +V +++ GAE LDPALA DA++LC ++ A V GGVGPFGLWVLAS+ +E+T
Sbjct: 37 SQADVEVSFEVASIDGAEALDPALANDAQKLCSMRGAHVEGGVGPFGLWVLASSKLEEKT 216
Query: 1465 AVFFRVFKPA 1494
AVFFRVFK A
Sbjct: 217 AVFFRVFKAA 246
Score = 95.0 bits (201), Expect(3) = 7e-021
Identities = 41/66 (62%), Positives = 47/66 (71%)
Frame = +3 / +3
Query: 1569 DICRICRHGHLERQDIPEKPDRPIGR*ELRSRGQDLHPLQGLPVAGHRQGRSPLRVQQRE 1748
D+ R+C H H + QDI EKPDR + R ELR RGQDLHPL GLP A Q RSP R+QQR+
Sbjct: 336 DLRRLC*H*HSQGQDISEKPDRSVRRGELRGRGQDLHPLPGLPDARAGQERSPSRLQQRQ 515
Query: 1749 GARQGV 1766
G QGV
Sbjct: 516 GGHQGV 533
Score = 93.2 bits (197), Expect(2) = 6e-028
Identities = 44/71 (61%), Positives = 52/71 (73%)
Frame = -3 / -1
Query: 1773 ETGHLDVRPPVVEHVEASVLADGQRRVDPGEDAGLAPGSEALNDRSVDQASQGYLAVRDV 1594
E HLDV VVE V+ASVLA +RRVDPGEDAG AP EAL+D +DQASQ YLA+ V
Sbjct: 540 ELRHLDVHLAVVEDVKASVLAQRERRVDPGEDAGPAPCPEALHDGPIDQASQRYLALGYV 361
Query: 1593 RVDKSCKCRAV 1561
V+K+C+ R V
Sbjct: 360 SVNKACEGRLV 328
Score = 58.3 bits (121), Expect(3) = 7e-051
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = -3 / -1
Query: 1491 GLEHPEEHRGSLLAVGGGQHPQPERPHAAPHVRALHAAQ 1375
GLEHPEE R LL +G G+HPQ E HAA HV HAAQ
Sbjct: 243 GLEHPEEDRRLLLQLGRGEHPQAEGAHAAFHVGTPHAAQ 127
Score = 52.4 bits (108), Expect(2) = 6e-028
Identities = 24/39 (61%), Positives = 24/39 (61%)
Frame = -1 / -2
Query: 1493 AGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 1377
A LNT K TAV S L EASTH P GPTPP T A H
Sbjct: 245 AALNTRKKTAVFSSSLDEASTHRPKGPTPPSTWAPLMLH 129
Score = 28.1 bits (55), Expect(3) = 7e-021
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +1 / +1
Query: 1273 QTAQADVEVSFEVS 1314
+T+QADVEVSFEV+
Sbjct: 31 RTSQADVEVSFEVA 72
Score = 26.7 bits (52), Expect(3) = 7e-051
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -2
Query: 1310 TSKLTSTSACAV 1275
TSKLTSTSAC V
Sbjct: 68 TSKLTSTSACEV 33
Score = 21.7 bits (41), Expect(3) = 7e-021
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2 / +2
Query: 1427 CGCWPPPTARR 1459
CGC P P+ RR
Sbjct: 179 CGCSPRPSWRR 211
>gb|AV924972.1|AV924972 AV924972 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd17l02 5', mRNA sequence
Length = 549
Score = 208 bits (448), Expect(2) = 1e-068
Identities = 80/110 (72%), Positives = 96/110 (87%)
Frame = +1 / +2
Query: 985 RLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
RL+YDYGNFYASKTFYDPAK RR+L GWANESD+ A D AKGWAGI AIPR +WLDPSGK
Sbjct: 80 RLQYDYGNFYASKTFYDPAKNRRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGK 259
Query: 1165 QLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVS 1314
QLLQWP+EE+E LR K+V++ ++V+K G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 260 QLLQWPVEELEQLRGKAVSVGDKVVKPGQHFEVTGLQSYQSDVEVSFEVA 409
Score = 139 bits (298), Expect(2) = 3e-039
Identities = 67/103 (65%), Positives = 73/103 (70%)
Frame = -1 / -1
Query: 1310 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLG 1131
TSKLTSTS C PVTS P L TL +T LS S+SS GHC+SC PLGSSH LG
Sbjct: 405 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 226
Query: 1130 MAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1002
+AW+PA PLA S A +SDSLAQP RR LAGS* VLDA*KLP
Sbjct: 225 IAWMPAHPLALSWATLSDSLAQPSSTRRFLAGS*KVLDA*KLP 97
Score = 73.5 bits (154), Expect(2) = 1e-068
Identities = 30/55 (54%), Positives = 38/55 (69%)
Frame = +1 / +2
Query: 1294 EVSFEVSPSALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKE 1458
+V ++L A DPA A DA++LCG+K AD +GGVGPFGLWVLASA+ E
Sbjct: 383 DVEVSFEVASLDKAXPFDPAYANDAQKLCGMKNADAKGGVGPFGLWVLASADLAE 547
Score = 44.1 bits (90), Expect(2) = 3e-039
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = -1 / -1
Query: 1457 SLRLAEASTHSPNGPTPPLTSARFTPH 1377
S R AEA T P GPTPPL SA F PH
Sbjct: 546 SARSAEARTQRPKGPTPPLASAFFIPH 466
>gb|AL505748.1|AL505748 AL505748 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09G14V 5', mRNA sequence
Length = 465
Score = 205 bits (443), Expect(2) = 3e-068
Identities = 79/110 (71%), Positives = 95/110 (86%)
Frame = +1 / +1
Query: 985 RLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
R +YDYGNFYASKTFYDPAK RR+L GWANESD+ A D AKGWAGI AIPR +WLDPSGK
Sbjct: 4 RXQYDYGNFYASKTFYDPAKNRRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGK 183
Query: 1165 QLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVS 1314
QLLQWP+EE+E LR K+V++ ++V+K G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 184 QLLQWPVEELEQLRGKAVSVGDKVVKPGQHFEVTGLQSYQSDVEVSFEVA 333
Score = 139 bits (298), Expect(2) = 8e-039
Identities = 67/103 (65%), Positives = 73/103 (70%)
Frame = -1 / -2
Query: 1310 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLG 1131
TSKLTSTS C PVTS P L TL +T LS S+SS GHC+SC PLGSSH LG
Sbjct: 329 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 150
Query: 1130 MAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1002
+AW+PA PLA S A +SDSLAQP RR LAGS* VLDA*KLP
Sbjct: 149 IAWMPAHPLALSWATLSDSLAQPSSTRRFLAGS*KVLDA*KLP 21
Score = 74.8 bits (157), Expect(2) = 3e-068
Identities = 30/52 (57%), Positives = 38/52 (73%)
Frame = +1 / +1
Query: 1294 EVSFEVSPSALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASAN 1449
+V ++L AE DPA A DA++LCG+K AD +GGVGPFGLWVLASA+
Sbjct: 307 DVEVSFEVASLDKAEPXDPAYANDAQKLCGMKNADAKGGVGPFGLWVLASAD 462
Score = 42.8 bits (87), Expect(2) = 8e-039
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -1 / -2
Query: 1451 RLAEASTHSPNGPTPPLTSARFTPH 1377
R AEA T P GPTPPL SA F PH
Sbjct: 464 RSAEARTQRPKGPTPPLASAFFIPH 390
>gb|BF267660.3|BF267660 HV_CEa0018I16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018I16f, mRNA sequence
Length = 519
Score = 208 bits (448), Expect(3) = 3e-067
Identities = 80/110 (72%), Positives = 96/110 (87%)
Frame = +1 / +3
Query: 985 RLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 1164
RL+YDYGNFYASKTFYDPAK RR+L GWANESD+ A D AKGWAGI AIPR +WLDPSGK
Sbjct: 39 RLQYDYGNFYASKTFYDPAKNRRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGK 218
Query: 1165 QLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEVS 1314
QLLQWP+EE+E LR K+V++ ++V+K G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 219 QLLQWPVEELEQLRGKAVSVGDKVVKPGQHFEVTGLQSYQSDVEVSFEVA 368
Score = 139 bits (298), Expect(2) = 2e-034
Identities = 67/103 (65%), Positives = 73/103 (70%)
Frame = -1 / -3
Query: 1310 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLG 1131
TSKLTSTS C PVTS P L TL +T LS S+SS GHC+SC PLGSSH LG
Sbjct: 364 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 185
Query: 1130 MAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1002
+AW+PA PLA S A +SDSLAQP RR LAGS* VLDA*KLP
Sbjct: 184 IAWMPAHPLALSWATLSDSLAQPSSTRRFLAGS*KVLDA*KLP 56
Score = 64.3 bits (134), Expect(3) = 3e-067
Identities = 26/48 (54%), Positives = 32/48 (66%)
Frame = +1 / +3
Query: 1294 EVSFEVSPSALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVL 1437
+V ++L AE DPA A DA++LCG+K AD R GVGPF LWVL
Sbjct: 342 DVEVSFEVASLDKAEPFDPAYANDAQKLCGMKNADPRAGVGPFALWVL 485
Score = 27.6 bits (54), Expect(2) = 2e-034
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1 / -3
Query: 1433 THSPNGPTPPLTSARFTPH 1377
T GPTP L SA F PH
Sbjct: 481 TQRAKGPTPALGSAFFIPH 425
Score = 23.5 bits (45), Expect(3) = 3e-067
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1 / +3
Query: 952 YVPDDPAGDEHR 987
YVPD+P GD ++
Sbjct: 3 YVPDNPTGDVYQ 38
>gb|BQ468801.1|BQ468801 HM02G04r HM Hordeum vulgare subsp. vulgare cDNA clone HM02G04
5-PRIME, mRNA sequence
Length = 502
Score = 114 bits (244), Expect(3) = 3e-065
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = +1 / +1
Query: 835 GLETSVPPGPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRY 996
GL+TSV GPRVKHVLKNSLDLRRYDYYTVGTY + ERYVPD+PAGDEH LRY
Sbjct: 340 GLDTSVVSGPRVKHVLKNSLDLRRYDYYTVGTYDRKTERYVPDNPAGDEHHLRY 501
Score = 106 bits (226), Expect(3) = 3e-065
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = +1 / +1
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRGPG 648
+VQN+A+PKN SDPLLREWVKP NP+IVPEGGINATQFRDPTTAW G
Sbjct: 10 EVQNIAFPKNKSDPLLREWVKPRGNPIIVPEGGINATQFRDPTTAWYADG 159
Score = 81.3 bits (171), Expect(4) = 4e-038
Identities = 36/49 (73%), Positives = 36/49 (73%)
Frame = -1 / -3
Query: 647 PGPRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWT 501
P AVVGSRN VALMPPSGTM GL GFTHSRSSGSD F G A F T
Sbjct: 158 PSAYHAVVGSRNWVALMPPSGTMIGLPRGFTHSRSSGSDLFLGKAMFCT 12
Score = 68.0 bits (142), Expect(3) = 3e-065
Identities = 28/55 (50%), Positives = 31/55 (56%)
Frame = +1 / +1
Query: 667 LVGSAAGSSPRGVAYVYXXXXXXXXXXXXXPLHSAPTGMWECPDFYPVSKGGAPR 831
L+ A + RGVAYVY PLHSAPTGMWECPD YPV+ G R
Sbjct: 169 LLIGALSGASRGVAYVYRSRDFMRWTRVRKPLHSAPTGMWECPDLYPVTADGRHR 333
Score = 59.3 bits (123), Expect(4) = 4e-038
Identities = 25/42 (59%), Positives = 27/42 (64%)
Frame = -1 / -3
Query: 821 PPLLTG*KSGHSHIPVGAECSGXXXXXXXXXXXXRYTYATPR 696
P +TG +SGHSHIPVGAECSG RYTYATPR
Sbjct: 323 PSAVTGYRSGHSHIPVGAECSGFLTRVHRMKSRLRYTYATPR 198
Score = 44.1 bits (90), Expect(4) = 4e-038
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / -1
Query: 928 CPRCSSRTAGGRGCS*ARASP 866
C RCSSR+ GRGCS*ARASP
Sbjct: 433 CRRCSSRSGAGRGCS*ARASP 371
Score = 30.9 bits (61), Expect(4) = 4e-038
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -1 / -3
Query: 974 PAGSSGTYRSALGWYVPTV 918
PAG SGTYRS L VPTV
Sbjct: 479 PAGLSGTYRSVLRS*VPTV 423
>gb|BE559434.1|BE559434 HV_CEb0024K20f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024K20f, mRNA sequence
Length = 513
Score = 232 bits (502), Expect(2) = 2e-061
Identities = 84/102 (82%), Positives = 93/102 (91%)
Frame = +1 / +1
Query: 142 EAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNI 321
EA AAT VP SI++PLLRTGYHFQPP NWINDPN P+YYKGWYH FYQYNPKGAVWGNI
Sbjct: 166 EAEAATPSVPASILSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNPKGAVWGNI 345
Query: 322 VWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
+WAHSVSRDLINW+ALEPA++PSIP D+YG WSGSAT+LPDG
Sbjct: 346 IWAHSVSRDLINWMALEPAIKPSIPTDQYGVWSGSATILPDG 471
Score = 175 bits (377), Expect(2) = 7e-044
Identities = 72/94 (76%), Positives = 75/94 (79%)
Frame = -1 / -2
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 267
PSG VA+PDQ PY S GM GL AGSSA QLMRSRDTECA MLPHTAPLGLYW* KWYH
Sbjct: 470 PSGRMVAEPDQTPYWSVGMEGLMAGSSAIQLMRSRDTECAQMMLPHTAPLGLYW*NKWYH 291
Query: 266 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 165
PL* G GSLIQF+GGWKW PV SRGL M+ GT
Sbjct: 290 PL**SGPFGSLIQFMGGWKW*PVRSRGLRMEAGT 189
Score = 136 bits (291), Expect = 5e-031
Identities = 58/95 (61%), Positives = 67/95 (70%)
Frame = +3 / +3
Query: 132 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 311
P RG GD A +H QPPA DG+PLP P ELDQ S+ A +LQG+VP +LP+Q QGR +
Sbjct: 156 PEPRGRGGDAVRAGLHSQPPAPDGLPLPTPHELDQRSKWAALLQGMVPLVLPVQPQGRGV 335
Query: 312 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 416
GQH +GALGV RPHQL GA AG Q HP R VR L
Sbjct: 336 GQHHLGALGVPRPHQLDGAGAGHQALHPHRPVRRL 440
Score = 24.9 bits (48), Expect(2) = 2e-061
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1 / +1
Query: 448 GGPVIMYTGVDHP 486
G P ++YTG+D P
Sbjct: 469 GTPAMLYTGIDRP 507
Score = 23.5 bits (45), Expect(2) = 7e-044
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / -2
Query: 116 TTCDAPASCNSSS 78
T+ DAPASC SS
Sbjct: 152 TSWDAPASCRRSS 114
>gb|BF628700.2|BF628700 HVSMEb0007E05f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007E05f, mRNA sequence
Length = 694
Score = 161 bits (347), Expect(2) = 3e-058
Identities = 57/84 (67%), Positives = 66/84 (78%)
Frame = +1 / +3
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEP 375
RT +HFQP KNW+NDPN P+YYKGWYH FYQ+NP GAVWGNI W H+VSRDL++W+ L P
Sbjct: 219 RTAFHFQPQKNWMNDPNGPLYYKGWYHLFYQWNPDGAVWGNITWGHAVSRDLVHWLHLPP 398
Query: 376 ALRPSIPGDRYGCWSGSATVLPDG 447
A+ P D G WSGSAT LPDG
Sbjct: 399 AMVPDHWYDINGVWSGSATQLPDG 470
Score = 112 bits (239), Expect(2) = 6e-031
Identities = 48/83 (57%), Positives = 53/83 (63%)
Frame = -1 / -1
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 267
PSGS VA+P Q P +S G AG +Q RSRDT H M PHTAP G +W*K+ YH
Sbjct: 469 PSGSCVAEPLQTPLMSYQWSGTMAGGRWSQWTRSRDTAWPHVMFPHTAPSGFHW*KR*YH 290
Query: 266 PL*YMGALGSLIQFLGGWKWYPV 198
PL*Y G LGS IQF GWKW V
Sbjct: 289 PL*YSGPLGSFIQFFWGWKWNAV 221
Score = 85.4 bits (180), Expect(2) = 3e-058
Identities = 34/60 (56%), Positives = 39/60 (65%)
Frame = +1 / +3
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRGPGPEQWRLLVGS 678
QVQ +A P + SDPLLR W K NPV+VP GI T FRDPTTAW P WR+ +GS
Sbjct: 513 QVQLLAEPADPSDPLLRGWAKSESNPVLVPPPGIGLTGFRDPTTAWLNPTDRAWRITIGS 692
Score = 43.2 bits (88), Expect(2) = 6e-031
Identities = 24/54 (44%), Positives = 25/54 (46%)
Frame = -1 / -1
Query: 674 PTSSRHCSGPGPRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYA 513
P R G AVVGSR V+ MP GT TG RSSGSD G A
Sbjct: 688 PMVIRQALSVGLSHAVVGSRKPVSPMPGGGTRTGFDSDLAQPRSSGSDGSAGSA 527
>gb|BJ467660.1|BJ467660 BJ467660 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29e15 3', mRNA sequence
Length = 602
Score = 214 bits (461), Expect(2) = 7e-058
Identities = 88/104 (84%), Positives = 96/104 (92%)
Frame = +1 / -3
Query: 1504 KPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCIL 1683
KP+VLMC+DPTKSS P LY+PTFAGFVDTDIS+GKISLRSLIDRSVVESFGAGGKTCIL
Sbjct: 540 KPLVLMCSDPTKSSLTPGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCIL 361
Query: 1684 SRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMNGA* 1815
SRVYPS+AIGKDA LYVFNNG +KVS+L AWEMKKP+MNGA*
Sbjct: 360 SRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEMKKPMMNGA* 229
Score = 168 bits (362), Expect(2) = 2e-042
Identities = 75/103 (72%), Positives = 83/103 (80%)
Frame = -1 / +2
Query: 1811 APFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRS 1632
APF+ GFFISHA+ DTL PLLNT*R AS P+A DG TLERMQV PPAPKLSTT+RS
Sbjct: 233 APFIMGFFISHALSWDTLISVSPLLNT*RCASFPIAMDGYTLERMQVFPPAPKLSTTERS 412
Query: 1631 IRLLRDILPFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGL 1503
I+LL++I P EMSVSTNPANVG YR G DDLVGS+HM T GL
Sbjct: 413 IKLLKEIFPDEMSVSTNPANVGLYRPGVRDDLVGSLHMRTRGL 541
Score = 31.8 bits (63), Expect(2) = 7e-058
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1 / -3
Query: 1441 SANRKERTAVFFRVFKPAAGDKPVVL 1518
SA+ E+TAVFFRVFK G V++
Sbjct: 600 SADLAEKTAVFFRVFKDGYGKPLVLM 523
Score = 25.8 bits (50), Expect(2) = 2e-042
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1 / +2
Query: 1499 PAAGLNTLKNTAVLSLRLAE 1440
P L TLK TAV S R AE
Sbjct: 542 PYPSLKTLKKTAVFSARSAE 601
>gb|BJ457246.1|BJ457246 BJ457246 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak26o06 3', mRNA sequence
Length = 581
Score = 214 bits (461), Expect(2) = 5e-057
Identities = 88/104 (84%), Positives = 96/104 (92%)
Frame = +1 / -2
Query: 1504 KPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCIL 1683
KP+VLMC+DPTKSS P LY+PTFAGFVDTDIS+GKISLRSLIDRSVVESFGAGGKTCIL
Sbjct: 532 KPLVLMCSDPTKSSLTPGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCIL 353
Query: 1684 SRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMNGA* 1815
SRVYPS+AIGKDA LYVFNNG +KVS+L AWEMKKP+MNGA*
Sbjct: 352 SRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEMKKPMMNGA* 221
Score = 168 bits (362), Expect = 8e-041
Identities = 75/103 (72%), Positives = 83/103 (80%)
Frame = -1 / +3
Query: 1811 APFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRS 1632
APF+ GFFISHA+ DTL PLLNT*R AS P+A DG TLERMQV PPAPKLSTT+RS
Sbjct: 225 APFIMGFFISHALSWDTLISVSPLLNT*RCASFPIAMDGYTLERMQVFPPAPKLSTTERS 404
Query: 1631 IRLLRDILPFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGL 1503
I+LL++I P EMSVSTNPANVG YR G DDLVGS+HM T GL
Sbjct: 405 IKLLKEIFPDEMSVSTNPANVGLYRPGVRDDLVGSLHMRTRGL 533
Score = 29.0 bits (57), Expect(2) = 5e-057
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1 / -2
Query: 1456 ERTAVFFRVFKPAAGDKPVVL 1518
E+TAVFFRVFK G V++
Sbjct: 577 EKTAVFFRVFKDGYGKPLVLM 515
>gb|BF258913.2|BF258913 HVSMEf0017A16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017A16f, mRNA sequence
Length = 803
Score = 91.8 bits (194), Expect(4) = 5e-057
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = +1 / +1
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGN 318
R+ YHFQP KNW NDPN PMY+ G YHFFYQYNP G WGN
Sbjct: 157 RSAYHFQPAKNWQNDPNGPMYHNGLYHFFYQYNPDGVTWGN 279
Score = 83.1 bits (175), Expect(4) = 5e-057
Identities = 33/48 (68%), Positives = 35/48 (72%)
Frame = +1 / +1
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRG 642
QVQNVAYPKN SDPLL EWVKP +NPVI I FRDP+TAW G
Sbjct: 457 QVQNVAYPKNASDPLLVEWVKPEYNPVIPVPADIKRDDFRDPSTAWLG 600
Score = 80.3 bits (169), Expect(4) = 5e-057
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = +1 / +1
Query: 313 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
GN+ W HSVS DL+NW AL+ AL PS D GCWSGSAT+LPDG
Sbjct: 280 GNLSWGHSVSLDLVNWFALDTALEPSRSFDANGCWSGSATILPDG 414
Score = 70.7 bits (148), Expect(3) = 8e-039
Identities = 26/36 (72%), Positives = 27/36 (75%)
Frame = -1 / -1
Query: 314 PHTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKW 207
PH P GLYW*KKWY+PL YMG LGS QFL G KW
Sbjct: 275 PHVTPSGLYW*KKWYNPLWYMGPLGSFCQFLAG*KW 168
Score = 65.7 bits (137), Expect(3) = 8e-039
Identities = 28/48 (58%), Positives = 29/48 (60%)
Frame = -1 / -1
Query: 641 PRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWTW 498
P AV GSR LM MTGL GFTHS SGS+ F G ATFWTW
Sbjct: 599 PSHAVEGSRKSSRLMSAGTGMTGLYSGFTHSTRSGSEAFLG*ATFWTW 456
Score = 63.8 bits (133), Expect(3) = 8e-039
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = -1 / -1
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 312
PSG VA+PDQQP S LG SA SSA Q RSR+TEC H LP
Sbjct: 413 PSGRMVAEPDQQPLASNDRLGSSAVSSANQFTRSRETECPHDRLP 279
Score = 24.4 bits (47), Expect(4) = 5e-057
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 448 GGPVIMYTGVD 480
G PV++YTG+D
Sbjct: 412 GSPVMLYTGID 444
>gb|BQ471962.1|BQ471962 HV04A04r HV Hordeum vulgare subsp. vulgare cDNA clone HV04A04
5-PRIME, mRNA sequence
Length = 460
Score = 91.8 bits (194), Expect(4) = 5e-057
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = +1 / +1
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGN 318
R+ YHFQP KNW NDPN PMY+ G YHFFYQYNP G WGN
Sbjct: 13 RSAYHFQPAKNWQNDPNGPMYHNGLYHFFYQYNPDGVTWGN 135
Score = 83.1 bits (175), Expect(4) = 5e-057
Identities = 33/48 (68%), Positives = 35/48 (72%)
Frame = +1 / +1
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRG 642
QVQNVAYPKN SDPLL EWVKP +NPVI I FRDP+TAW G
Sbjct: 313 QVQNVAYPKNASDPLLVEWVKPEYNPVIPVPADIKRDDFRDPSTAWLG 456
Score = 80.3 bits (169), Expect(4) = 5e-057
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = +1 / +1
Query: 313 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
GN+ W HSVS DL+NW AL+ AL PS D GCWSGSAT+LPDG
Sbjct: 136 GNLSWGHSVSLDLVNWFALDTALEPSRSFDANGCWSGSATILPDG 270
Score = 77.6 bits (163), Expect(3) = 8e-041
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = -1 / -3
Query: 314 PHTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKW 207
PH P GLYW*KKWY+PL YMG LGS QFL GWKW
Sbjct: 131 PHVTPSGLYW*KKWYNPLWYMGPLGSFCQFLAGWKW 24
Score = 65.7 bits (137), Expect(3) = 8e-041
Identities = 28/48 (58%), Positives = 29/48 (60%)
Frame = -1 / -3
Query: 641 PRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWTW 498
P AV GSR LM MTGL GFTHS SGS+ F G ATFWTW
Sbjct: 455 PSHAVEGSRKSSRLMSAGTGMTGLYSGFTHSTRSGSEAFLG*ATFWTW 312
Score = 63.8 bits (133), Expect(3) = 8e-041
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = -1 / -3
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 312
PSG VA+PDQQP S LG SA SSA Q RSR+TEC H LP
Sbjct: 269 PSGRMVAEPDQQPLASNDRLGSSAVSSANQFTRSRETECPHDRLP 135
Score = 24.4 bits (47), Expect(4) = 5e-057
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 448 GGPVIMYTGVD 480
G PV++YTG+D
Sbjct: 268 GSPVMLYTGID 300
>gb|BQ768116.1|BQ768116 EBro08_SQ010_A24_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_A24 5', mRNA sequence
Length = 642
Score = 91.8 bits (194), Expect(4) = 2e-056
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = +1 / +1
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGN 318
R+ YHFQP KNW NDPN PMY+ G YHFFYQYNP G WGN
Sbjct: 202 RSAYHFQPAKNWQNDPNGPMYHNGLYHFFYQYNPDGVTWGN 324
Score = 81.3 bits (171), Expect(4) = 2e-056
Identities = 32/46 (69%), Positives = 34/46 (73%)
Frame = +1 / +1
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAW 636
QVQNVAYPKN SDPLL EWVKP +NPVI I FRDP+TAW
Sbjct: 502 QVQNVAYPKNASDPLLVEWVKPEYNPVIPVPADIKRDDFRDPSTAW 639
Score = 80.3 bits (169), Expect(4) = 2e-056
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = +1 / +1
Query: 313 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
GN+ W HSVS DL+NW AL+ AL PS D GCWSGSAT+LPDG
Sbjct: 325 GNLSWGHSVSLDLVNWFALDTALEPSRSFDANGCWSGSATILPDG 459
Score = 77.6 bits (163), Expect(3) = 5e-040
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = -1 / -2
Query: 314 PHTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKW 207
PH P GLYW*KKWY+PL YMG LGS QFL GWKW
Sbjct: 320 PHVTPSGLYW*KKWYNPLWYMGPLGSFCQFLAGWKW 213
Score = 63.8 bits (133), Expect(3) = 5e-040
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = -1 / -2
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 312
PSG VA+PDQQP S LG SA SSA Q RSR+TEC H LP
Sbjct: 458 PSGRMVAEPDQQPLASNDRLGSSAVSSANQFTRSRETECPHDRLP 324
Score = 62.9 bits (131), Expect(3) = 5e-040
Identities = 27/45 (60%), Positives = 28/45 (62%)
Frame = -1 / -2
Query: 632 AVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWTW 498
AV GSR LM MTGL GFTHS SGS+ F G ATFWTW
Sbjct: 635 AVEGSRKSSRLMSAGTGMTGLYSGFTHSTRSGSEAFLG*ATFWTW 501
Score = 24.4 bits (47), Expect(4) = 2e-056
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 448 GGPVIMYTGVD 480
G PV++YTG+D
Sbjct: 457 GSPVMLYTGID 489
>gb|BJ449827.1|BJ449827 BJ449827 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak26o06 5', mRNA sequence
Length = 600
Score = 214 bits (461), Expect(2) = 2e-056
Identities = 88/104 (84%), Positives = 96/104 (92%)
Frame = +1 / +3
Query: 1504 KPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCIL 1683
KP+VLMC+DPTKSS P LY+PTFAGFVDTDIS+GKISLRSLIDRSVVESFGAGGKTCIL
Sbjct: 51 KPLVLMCSDPTKSSLTPGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCIL 230
Query: 1684 SRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMNGA* 1815
SRVYPS+AIGKDA LYVFNNG +KVS+L AWEMKKP+MNGA*
Sbjct: 231 SRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEMKKPMMNGA* 362
Score = 168 bits (362), Expect = 8e-041
Identities = 75/103 (72%), Positives = 83/103 (80%)
Frame = -1 / -3
Query: 1811 APFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRS 1632
APF+ GFFISHA+ DTL PLLNT*R AS P+A DG TLERMQV PPAPKLSTT+RS
Sbjct: 358 APFIMGFFISHALSWDTLISVSPLLNT*RCASFPIAMDGYTLERMQVFPPAPKLSTTERS 179
Query: 1631 IRLLRDILPFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGL 1503
I+LL++I P EMSVSTNPANVG YR G DDLVGS+HM T GL
Sbjct: 178 IKLLKEIFPDEMSVSTNPANVGLYRPGVRDDLVGSLHMRTRGL 50
Score = 26.7 bits (52), Expect(2) = 2e-056
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1 / +3
Query: 1459 RTAVFFRVFKPAAGDKPVVL 1518
+TAVFFRVFK G V++
Sbjct: 9 KTAVFFRVFKDGYGKPLVLM 68
>gb|BE558756.2|BE558756 HV_CEb0020F02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020F02f, mRNA sequence
Length = 799
Score = 83.1 bits (175), Expect(6) = 4e-055
Identities = 33/48 (68%), Positives = 35/48 (72%)
Frame = +1 / +2
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRG 642
QVQNVAYPKN SDPLL EWVKP +NPVI I FRDP+TAW G
Sbjct: 248 QVQNVAYPKNASDPLLVEWVKPEYNPVIPVPADIKRDDFRDPSTAWLG 391
Score = 80.3 bits (169), Expect(6) = 4e-055
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = +1 / +2
Query: 313 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
GN+ W HSVS DL+NW AL+ AL PS D GCWSGSAT+LPDG
Sbjct: 71 GNLSWGHSVSLDLVNWFALDTALEPSRSFDANGCWSGSATILPDG 205
Score = 65.7 bits (137), Expect(3) = 1e-032
Identities = 28/48 (58%), Positives = 29/48 (60%)
Frame = -1 / -2
Query: 641 PRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWTW 498
P AV GSR LM MTGL GFTHS SGS+ F G ATFWTW
Sbjct: 390 PSHAVEGSRKSSRLMSAGTGMTGLYSGFTHSTRSGSEAFLG*ATFWTW 247
Score = 63.8 bits (133), Expect(3) = 1e-032
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = -1 / -2
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 312
PSG VA+PDQQP S LG SA SSA Q RSR+TEC H LP
Sbjct: 204 PSGRMVAEPDQQPLASNDRLGSSAVSSANQFTRSRETECPHDRLP 70
Score = 54.2 bits (112), Expect(6) = 4e-055
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +1 / +2
Query: 250 PMYYKGWYHFFYQYNPKGAVWGN 318
PMY+ G YHFFYQYNP G WGN
Sbjct: 2 PMYHNGLYHFFYQYNPDGVTWGN 70
Score = 50.1 bits (103), Expect(3) = 1e-032
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -1 / -2
Query: 314 PHTAPLGLYW*KKWYHPL*YMG 249
PH P GLYW*KKWY+PL YMG
Sbjct: 66 PHVTPSGLYW*KKWYNPLWYMG 1
Score = 47.3 bits (97), Expect(6) = 4e-055
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +1 / +2
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDP 1038
G +HVLK S+ DYY V Y A+ +P+D R D+ YAS +F++P
Sbjct: 593 GAXARHVLKMSVMDTVQDYYVVRRYDDTADNLLPEDDGDWXSWRRLDFRQLYASNSFWNP 772
Query: 1039 AKRRRIL 1059
+ +L
Sbjct: 773 TRPGALL 793
Score = 29.5 bits (58), Expect(6) = 4e-055
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +2
Query: 778 GMWECPDFYPVSKGG 822
GM ECPD +PVS+ G
Sbjct: 524 GMVECPDLFPVSEPG 568
Score = 24.4 bits (47), Expect(6) = 4e-055
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 448 GGPVIMYTGVD 480
G PV++YTG+D
Sbjct: 203 GSPVMLYTGID 235
>gb|BF065803.2|BF065803 HV_CEb0014A16f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014A16f, mRNA sequence
Length = 920
Score = 130 bits (279), Expect(4) = 7e-054
Identities = 49/98 (50%), Positives = 65/98 (66%)
Frame = +1 / +3
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDP 1038
G +HVLK S+ DYY VG Y A+ +VP+D R DYG+ YASK+F+DP
Sbjct: 378 GAGARHVLKMSVMDTVQDYYVVGRYDDTADTFVPEDDGDCRSWRRLDYGHVYASKSFFDP 557
Query: 1039 AKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 1152
+K RR+LWGWANESD+ ADD+ KGW+G+Q + W+D
Sbjct: 558 SKNRRVLWGWANESDSLADDLGKGWSGVQTVSEKKWVD 671
Score = 83.1 bits (175), Expect(4) = 7e-054
Identities = 33/48 (68%), Positives = 35/48 (72%)
Frame = +1 / +3
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRG 642
QVQNVAYPKN SDPLL EWVKP +NPVI I FRDP+TAW G
Sbjct: 33 QVQNVAYPKNASDPLLVEWVKPEYNPVIPVPADIKRDDFRDPSTAWLG 176
Score = 65.7 bits (137), Expect(3) = 4e-021
Identities = 28/48 (58%), Positives = 29/48 (60%)
Frame = -1 / -2
Query: 641 PRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWTW 498
P AV GSR LM MTGL GFTHS SGS+ F G ATFWTW
Sbjct: 175 PSHAVEGSRKSSRLMSAGTGMTGLYSGFTHSTRSGSEAFLG*ATFWTW 32
Score = 53.8 bits (111), Expect(3) = 4e-021
Identities = 35/87 (40%), Positives = 37/87 (42%)
Frame = -1 / -2
Query: 1118 PAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLPXXXXXXXXSPAGSSGTYRSAL 939
P PL SSA +SDSLAQP RR L GS LDA P SSGT SA+
Sbjct: 637 PDHPLPRSSARLSDSLAQPQSTRRFLLGSKKDLDAYTWP*SRRRQLRQSPSSSGTKVSAV 458
Query: 938 GWYVPTVXXXXXXXXRLFLSTCFTLGP 858
PT L STC P
Sbjct: 457 SS*RPTT**SWTVSITLIFSTCLAPAP 377
Score = 35.0 bits (70), Expect(4) = 7e-054
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 1162 KQLLQWPIEEVEALRAK 1212
KQL QWPIEE+E LR K
Sbjct: 680 KQLAQWPIEEIETLRNK 730
Score = 29.5 bits (58), Expect(4) = 7e-054
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 778 GMWECPDFYPVSKGG 822
GM ECPD +PVS+ G
Sbjct: 309 GMVECPDLFPVSEPG 353
Score = 27.6 bits (54), Expect(3) = 4e-021
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1 / -3
Query: 1205 LSASTSSIGHCNSCFPL 1155
L S SSIGHC SC L
Sbjct: 723 LRVSISSIGHCASCLRL 673
>gb|BU995607.1|BU995607 HM10M18r HM Hordeum vulgare subsp. vulgare cDNA clone HM10M18
5-PRIME, mRNA sequence
Length = 625
Score = 83.1 bits (175), Expect(5) = 1e-053
Identities = 33/48 (68%), Positives = 35/48 (72%)
Frame = +1 / +2
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRG 642
QVQNVAYPKN SDPLL EWVKP +NPVI I FRDP+TAW G
Sbjct: 281 QVQNVAYPKNASDPLLVEWVKPEYNPVIPVPADIKRDDFRDPSTAWLG 424
Score = 80.3 bits (169), Expect(5) = 1e-053
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = +1 / +2
Query: 313 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
GN+ W HSVS DL+NW AL+ AL PS D GCWSGSAT+LPDG
Sbjct: 104 GNLSWGHSVSLDLVNWFALDTALEPSRSFDANGCWSGSATILPDG 238
Score = 77.1 bits (162), Expect(5) = 1e-053
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = +1 / +2
Query: 217 PPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGN 318
P KNW NDPN PMY+ G YHFFYQYNP G WGN
Sbjct: 2 PAKNWQNDPNGPMYHNGLYHFFYQYNPDGVTWGN 103
Score = 65.7 bits (137), Expect(3) = 3e-037
Identities = 28/48 (58%), Positives = 29/48 (60%)
Frame = -1 / -2
Query: 641 PRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWTW 498
P AV GSR LM MTGL GFTHS SGS+ F G ATFWTW
Sbjct: 423 PSHAVEGSRKSSRLMSAGTGMTGLYSGFTHSTRSGSEAFLG*ATFWTW 280
Score = 65.2 bits (136), Expect(3) = 3e-037
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = -1 / -2
Query: 314 PHTAPLGLYW*KKWYHPL*YMGALGSLIQFLGG 216
PH P GLYW*KKWY+PL YMG LGS QFL G
Sbjct: 99 PHVTPSGLYW*KKWYNPLWYMGPLGSFCQFLAG 1
Score = 63.8 bits (133), Expect(3) = 3e-037
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = -1 / -2
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 312
PSG VA+PDQQP S LG SA SSA Q RSR+TEC H LP
Sbjct: 237 PSGRMVAEPDQQPLASNDRLGSSAVSSANQFTRSRETECPHDRLP 103
Score = 29.5 bits (58), Expect(5) = 1e-053
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +2
Query: 778 GMWECPDFYPVSKGG 822
GM ECPD +PVS+ G
Sbjct: 557 GMVECPDLFPVSEPG 601
Score = 24.4 bits (47), Expect(5) = 1e-053
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 448 GGPVIMYTGVD 480
G PV++YTG+D
Sbjct: 236 GSPVMLYTGID 268
>gb|CA019964.1|CA019964 HV13O24r HV Hordeum vulgare subsp. vulgare cDNA clone HV13O24
5-PRIME, mRNA sequence
Length = 541
Score = 152 bits (327), Expect(3) = 3e-052
Identities = 55/101 (54%), Positives = 70/101 (69%)
Frame = +1 / +2
Query: 172 PSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDL 351
PS + + +T +HFQP KNW+NDP+ PMY+ G YH FYQYN G ++G+IVW HSVS DL
Sbjct: 38 PSPASTMYKTAFHFQPAKNWMNDPSGPMYFNGIYHEFYQYNLNGPIFGDIVWGHSVSTDL 217
Query: 352 INWVALEPALRPSIPGDRYGCWSGSATVLPDGGGPVIMYTG 474
+NW+ LEPAL P D GCW+GS T+LP G +I G
Sbjct: 218 VNWIGLEPALVRDTPSDIDGCWTGSVTILPGGKPVIIYTGG 340
Score = 103 bits (220), Expect(3) = 5e-027
Identities = 48/92 (52%), Positives = 54/92 (58%)
Frame = -1 / -2
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 267
P G V +P QQP +S G+ +AGSS QL RS +TE TM P PL LYW* W
Sbjct: 312 PPGRMVTEPVQQPSMSLGVSRTNAGSSPIQLTRSVETEWPQTMSPKMGPLRLYW*NSW*M 133
Query: 266 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDG 171
PL Y+G GS IQFL GWKW VL L DG
Sbjct: 132 PLKYIGPDGSFIQFLAGWKWKAVLYMVLAGDG 37
Score = 57.0 bits (118), Expect(3) = 3e-052
Identities = 19/32 (59%), Positives = 27/32 (84%)
Frame = +1 / +2
Query: 496 YQVQNVAYPKNVSDPLLREWVKPSHNPVIVPE 591
+Q QN+A+PKN SDP LREW+K ++NPV+ P+
Sbjct: 353 HQTQNIAFPKNRSDPYLREWIKAANNPVLRPD 448
Score = 35.9 bits (72), Expect(3) = 3e-052
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1 / +2
Query: 589 EGGINATQFRDPTTAWRGP 645
E G+N +FRDPTT W GP
Sbjct: 449 EPGMNVIEFRDPTTGWIGP 505
Score = 32.7 bits (65), Expect(3) = 5e-027
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = -1 / -2
Query: 674 PTSSRHCSGPGPRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATF 507
PT+ C + V + + SG TGL HS GSD F G A F
Sbjct: 531 PTAILQCPSGPIQPVVGSLNSITFIPGSSGRSTGLLAALIHSLRYGSDRFLGNAMF 364
Score = 24.0 bits (46), Expect(3) = 5e-027
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 473 PVYMITGPPP 444
PVYM+TG PP
Sbjct: 336 PVYMMTGLPP 307
>gb|BQ468711.1|BQ468711 HM02B12r HM Hordeum vulgare subsp. vulgare cDNA clone HM02B12
5-PRIME, mRNA sequence
Length = 528
Score = 205 bits (443), Expect = 5e-052
Identities = 82/104 (78%), Positives = 95/104 (91%)
Frame = +1 / +3
Query: 1492 AAGDKPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGK 1671
+ +KPVVLMC+DPT SS NPNLY+PTFAGFVDTDI+ GKISLRSLIDRSVVESFGAGG+
Sbjct: 15 STNNKPVVLMCSDPTMSSLNPNLYKPTFAGFVDTDIAKGKISLRSLIDRSVVESFGAGGR 194
Query: 1672 TCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVM 1803
TCILSRVYP+LA+GK+ARL+VFNNG+ +KVS LTAWEMKKP +
Sbjct: 195 TCILSRVYPTLALGKNARLHVFNNGKVDIKVSELTAWEMKKPAL 326
Score = 174 bits (374), Expect = 2e-042
Identities = 79/98 (80%), Positives = 80/98 (81%)
Frame = -1 / -3
Query: 1796 GFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRSIRLLR 1617
GFFISHAV DTL LPLL T*RRA LP AS G*T ERMQVLPPAPKLSTTDRSIRLLR
Sbjct: 319 GFFISHAVSSDTLMSTLPLLKT*RRAFLPSASVG*TRERMQVLPPAPKLSTTDRSIRLLR 140
Query: 1616 DILPFEMSVSTNPANVGRYRFGFWDDLVGSVHMSTTGL 1503
DILP MSVST PA VG YRFGF DD+VGS HM TTGL
Sbjct: 139 DILPLAMSVSTKPAKVGLYRFGFRDDMVGSEHMRTTGL 26
Score = 113 bits (242), Expect = 3e-024
Identities = 49/77 (63%), Positives = 56/77 (72%)
Frame = +3 / +2
Query: 1569 DICRICRHGHLERQDIPEKPDRPIGR*ELRSRGQDLHPLQGLPVAGHRQGRSPLRVQQRE 1748
D+ R+C H H + QDI EKPDR + R ELR RGQDLHPL GLP A Q RSP R+QQR+
Sbjct: 92 DLRRLC*H*HSQGQDISEKPDRSVRRGELRGRGQDLHPLPGLPDARAGQERSPSRLQQRQ 271
Query: 1749 GARQGVPSHRVGDEEAG 1799
G QGV +H VGDEEAG
Sbjct: 272 GGHQGVGAHGVGDEEAG 322
Score = 109 bits (232), Expect = 7e-023
Identities = 51/79 (64%), Positives = 59/79 (74%)
Frame = -3 / -2
Query: 1797 RLLHLPRGETGHLDVRPPVVEHVEASVLADGQRRVDPGEDAGLAPGSEALNDRSVDQASQ 1618
RLLHLPR E HLDV VVE V+ASVLA +RRVDPGEDAG AP EAL+D +DQASQ
Sbjct: 320 RLLHLPRRELRHLDVHLAVVEDVKASVLAQRERRVDPGEDAGPAPCPEALHDGPIDQASQ 141
Query: 1617 GYLAVRDVRVDKSCKCRAV 1561
YLA+ V V+K+C+ R V
Sbjct: 140 RYLALGYVSVNKACEGRLV 84
>gb|BQ468810.1|BQ468810 HM02G15r HM Hordeum vulgare subsp. vulgare cDNA clone HM02G15
5-PRIME, mRNA sequence
Length = 529
Score = 180 bits (387), Expect(2) = 1e-051
Identities = 64/112 (57%), Positives = 90/112 (80%)
Frame = +1 / +2
Query: 976 DEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDP 1155
+++ LRYDYG+FYASK+FYDP K+RR+LWGWANESDT DD KGWAGIQAIPR ++L
Sbjct: 77 NDYGLRYDYGDFYASKSFYDPVKKRRVLWGWANESDTVPDDRQKGWAGIQAIPRKIFLSR 256
Query: 1156 SGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEV 1311
G+QL+QWP+EE+++LRAK V + ++ +K G + +V G ++ Q+DVE +F +
Sbjct: 257 GGRQLIQWPVEEIKSLRAKHVNVSDKAVKGGEYFKVGGFKSVQSDVEAAFMI 412
Score = 92.3 bits (195), Expect(2) = 8e-021
Identities = 49/98 (50%), Positives = 54/98 (55%)
Frame = -1 / -2
Query: 1295 STSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLGMAWIP 1116
STS C P T P L L L +T A + SS GH SC P + LG+AW+P
Sbjct: 396 STSDCTDLKPPTLKYSPPLTALSLTLTCLARNDLISSTGH*ISCLPPRDRNIFLGIAWMP 217
Query: 1115 AQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1002
AQP SS VSDSLAQP R RR GS*N DA*K P
Sbjct: 216 AQPFWRSSGTVSDSLAQPQRTRRFFTGS*NDFDA*KSP 103
Score = 45.1 bits (92), Expect(2) = 1e-051
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1 / +2
Query: 1324 LAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWV 1434
L AE D A DA+ LC + V+GGVGPFGLW+
Sbjct: 419 LEKAEKFDMAWRTDAQGLCKKLNSHVKGGVGPFGLWL 529
Score = 29.5 bits (58), Expect(2) = 8e-021
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / -2
Query: 1427 SPNGPTPPLT 1398
SPNGPTPPLT
Sbjct: 522 SPNGPTPPLT 493
>gb|BF256656.2|BF256656 HVSMEf0010J22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0010J22f, mRNA sequence
Length = 846
Score = 102 bits (217), Expect(3) = 4e-051
Identities = 40/73 (54%), Positives = 51/73 (69%)
Frame = +1 / +3
Query: 1093 DDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGI 1272
DD+ +GW+G+Q +PR +WLD GKQL QWPIEE+E LR K V L + AG E+ GI
Sbjct: 3 DDLVRGWSGVQTVPRKIWLDEDGKQLRQWPIEEIETLRNKRVNLLIPEVNAGGVNEIIGI 182
Query: 1273 QTAQADVEVSFEV 1311
AQADVEV F++
Sbjct: 183 VGAQADVEVMFQI 221
Score = 101 bits (215), Expect(3) = 4e-051
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = +1 / +3
Query: 1585 VDTDISNGKISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKV 1764
+D + G ISLR+L+D SVVESFG GG+TCI +RVYP + ++ LYVFNNG VKV
Sbjct: 489 MDIEAQGGSISLRTLVDHSVVESFGGGGRTCITARVYPDHVVNGNSHLYVFNNGTGAVKV 668
Query: 1765 SRLTAWEMKKPVMN 1806
S L AWEM +N
Sbjct: 669 SSLYAWEMATATVN 710
Score = 74.4 bits (156), Expect(4) = 5e-038
Identities = 36/70 (51%), Positives = 40/70 (57%)
Frame = -1 / -3
Query: 1301 LTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLGMAW 1122
+TSTSACA +P+ S PAL + R T LS S SSIGHC SC P SSH LG
Sbjct: 211 MTSTSACAPTMPMISFTPPALTSGISRFTRLFLSVSISSIGHCRSCLPSSSSHIFLGTV* 32
Query: 1121 IPAQPLATSS 1092
P PL SS
Sbjct: 31 TPDHPLTRSS 2
Score = 69.8 bits (146), Expect(4) = 4e-033
Identities = 32/68 (47%), Positives = 41/68 (60%)
Frame = +1 / +3
Query: 1285 ADVEVSFEVSPSALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERT 1464
A +V AL A+ L+P + + LCG K A V G VGPFGL V+AS + +E T
Sbjct: 189 AQADVEVMFQIPALEHADVLEPNWLLNPQSLCGEKGASVPGSVGPFGLLVMASGDMQEHT 368
Query: 1465 AVFFRVFK 1488
AVFFRVF+
Sbjct: 369 AVFFRVFR 392
Score = 65.2 bits (136), Expect(4) = 5e-038
Identities = 32/63 (50%), Positives = 37/63 (58%)
Frame = -3 / -2
Query: 1806 VHDRLLHLPRGETGHLDVRPPVVEHVEASVLADGQRRVDPGEDAGLAPGSEALNDRSVDQ 1627
VH R HLPR E GHLD VVEHV+ +V RV P DA A +EAL+ R VDQ
Sbjct: 710 VHGRGRHLPRVEAGHLDGAGAVVEHVQVAVAVHDVVRVHPRRDARPAAAAEALHHRVVDQ 531
Query: 1626 ASQ 1618
S+
Sbjct: 530 CSE 522
Score = 63.4 bits (132), Expect(4) = 4e-033
Identities = 30/73 (41%), Positives = 40/73 (54%)
Frame = +3 / +2
Query: 1590 HGHLERQDIPEKPDRPIGR*ELRSRGQDLHPLQGLPVAGHRQGRSPLRVQQREGARQGVP 1769
H Q + + RP+G ELR R QD+H +G+P + + P+RVQQR RQGV
Sbjct: 494 HRGARGQHLAQNTGRPLGGGELRRRRQDVHHGEGVPGPRRERQQPPVRVQQRHRRRQGVQ 673
Query: 1770 SHRVGDEEAGHER 1808
RVGD + ER
Sbjct: 674 PLRVGDGDRDRER 712
Score = 51.0 bits (105), Expect(4) = 5e-038
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -1 / -3
Query: 1487 LNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 1377
LNT K TAV S EA T SPNGPT P T A F+PH
Sbjct: 391 LNTRKKTAVCSCMSPEAMTSSPNGPTLPGTDAPFSPH 281
Score = 45.1 bits (92), Expect(3) = 4e-051
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1 / +3
Query: 1501 DKPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDI 1599
DK VLMCTD +KSS +Y+P + FVD DI
Sbjct: 399 DKYKVLMCTDLSKSSTRDGVYKPPYGAFVDMDI 497
Score = 32.7 bits (65), Expect(4) = 4e-033
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2 / +1
Query: 1514 CSCAPTLPSRPRTRTCTARHLQDLSTRTSR 1603
CSCAPT SR CT+R T TSR
Sbjct: 412 CSCAPTSRSRAPETACTSRRTGPSWTWTSR 501
Score = 32.7 bits (65), Expect(4) = 4e-033
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2 / +1
Query: 1091 PTMWPKAGLESRPFQGRCGWTPAGSSCCSG 1180
PT G R F+GR GWT SSC SG
Sbjct: 1 PTTSSGDGPVFRLFRGRYGWTKTASSCGSG 90
Score = 24.4 bits (47), Expect(4) = 5e-038
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -1 / -3
Query: 1598 MSVSTNPANVGRYRFGFWDDLVGSVHMSTTGLS 1500
MS+ST G Y D SVHMST LS
Sbjct: 496 MSMSTKAPYGGLYTPSLVLDFERSVHMSTLYLS 398
>gb|BF627833.2|BF627833 HVSMEb0005O19f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005O19f, mRNA sequence
Length = 816
Score = 91.8 bits (194), Expect(4) = 9e-051
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = +1 / +2
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGN 318
R+ YHFQP KNW NDPN PMY+ G YHFFYQYNP G WGN
Sbjct: 197 RSAYHFQPAKNWQNDPNGPMYHNGLYHFFYQYNPDGVTWGN 319
Score = 80.3 bits (169), Expect(4) = 9e-051
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = +1 / +2
Query: 313 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
GN+ W HSVS DL+NW AL+ AL PS D GCWSGSAT+LPDG
Sbjct: 320 GNLSWGHSVSLDLVNWFALDTALEPSRSFDANGCWSGSATILPDG 454
Score = 70.7 bits (148), Expect(3) = 2e-036
Identities = 26/36 (72%), Positives = 27/36 (75%)
Frame = -1 / -1
Query: 314 PHTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKW 207
PH P GLYW*KKWY+PL YMG LGS QFL G KW
Sbjct: 315 PHVTPSGLYW*KKWYNPLWYMGPLGSFCQFLAG*KW 208
Score = 63.8 bits (133), Expect(3) = 2e-036
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = -1 / -1
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 312
PSG VA+PDQQP S LG SA SSA Q RSR+TEC H LP
Sbjct: 453 PSGRMVAEPDQQPLASNDRLGSSAVSSANQFTRSRETECPHDRLP 319
Score = 62.0 bits (129), Expect(4) = 9e-051
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = +1 / +2
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTA 633
QVQNV+YPKN DPLL EWVKP NP + I +RDP TA
Sbjct: 497 QVQNVSYPKNACDPLLVEWVKPECNPGMPVPADIKRDDWRDPGTA 631
Score = 57.4 bits (119), Expect(3) = 2e-036
Identities = 25/48 (52%), Positives = 26/48 (54%)
Frame = -1 / -1
Query: 641 PRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWTW 498
P AV GSR LM + GL GFTHS SGS F G TFWTW
Sbjct: 639 PSHAVPGSRQSSRLMSAGTGIPGLHSGFTHSTRSGSQAFLG*LTFWTW 496
Score = 24.4 bits (47), Expect(4) = 9e-051
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 448 GGPVIMYTGVD 480
G PV++YTG+D
Sbjct: 452 GSPVMLYTGID 484
>gb|AV924542.1|AV924542 AV924542 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd14p15 5', mRNA sequence
Length = 602
Score = 199 bits (429), Expect = 5e-050
Identities = 80/151 (52%), Positives = 102/151 (67%)
Frame = +1 / +3
Query: 859 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDP 1038
G +HVLK S+ DYY VG Y A+ +VP+D R DYG+ YASK+F+DP
Sbjct: 75 GAGARHVLKMSVMDTVQDYYVVGRYDDTADTFVPEDDGDCRSWRRLDYGHVYASKSFFDP 254
Query: 1039 AKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSV 1218
+K RR+LWGWANESD+ ADD+ +GW+G+Q +PR +WLD GKQL QWPIEE+E LR K V
Sbjct: 255 SKNRRVLWGWANESDSLADDLVRGWSGVQTVPRKIWLDEDGKQLRQWPIEEIETLRNKRV 434
Query: 1219 TLKNRVIKAGHHVEVTGIQTAQADVEVSFEV 1311
L + AG E+ GI AQADVEV F++
Sbjct: 435 NLLIPEVNAGGVNEIIGIVGAQADVEVMFQI 527
Score = 115 bits (245), Expect = 1e-024
Identities = 66/148 (44%), Positives = 72/148 (48%)
Frame = -1 / -2
Query: 1301 LTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLGMAW 1122
+TSTSACA +P+ S PAL + R T LS S SSIGHC SC P SSH LG
Sbjct: 517 MTSTSACAPTMPMISFTPPALTSGISRFTRLFLSVSISSIGHCRSCLPSSSSHIFLGTV* 338
Query: 1121 IPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLPXXXXXXXXSPAGSSGTYRSA 942
P PL SSA +SDSLAQP RR L GS LDA P SSGT SA
Sbjct: 337 TPDHPLTRSSARLSDSLAQPQSTRRFLLGSKKDLDAYTWP*SRRRQLRQSPSSSGTKVSA 158
Query: 941 LGWYVPTVXXXXXXXXRLFLSTCFTLGP 858
+ PT L STC P
Sbjct: 157 VSS*RPTT**SWTVSITLIFSTCLAPAP 74
>gb|BF254630.1|BF254630 HVSMEf0004I24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0004I24f, mRNA sequence
Length = 899
Score = 88.1 bits (186), Expect(4) = 4e-048
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = +1 / +1
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGN 318
RT YHFQP K W NDPN P+Y+ G YHFFYQYNP GA WG+
Sbjct: 118 RTAYHFQPAKFWQNDPNGPLYHNGMYHFFYQYNPHGATWGD 240
Score = 70.7 bits (148), Expect(4) = 4e-048
Identities = 27/45 (60%), Positives = 31/45 (68%)
Frame = +1 / +1
Query: 313 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
G + W HSVS DL+NW + AL P+ P D GCWSGSATVLP G
Sbjct: 241 GTLSWGHSVSGDLVNWADVGNALDPTSPFDANGCWSGSATVLPGG 375
Score = 67.5 bits (141), Expect(3) = 2e-027
Identities = 25/36 (69%), Positives = 25/36 (69%)
Frame = -1 / -1
Query: 314 PHTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKW 207
P AP GLYW*KKWY PL Y G LGS Q L GWKW
Sbjct: 236 PQVAPWGLYW*KKWYMPLWYSGPLGSFCQNLAGWKW 129
Score = 64.3 bits (134), Expect(4) = 4e-048
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1 / +1
Query: 499 QVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPT 627
QVQNVA+ KN +DPLLREW KP+ NPV+ + FRDPT
Sbjct: 418 QVQNVAFAKNPADPLLREWEKPNCNPVMPMPADVTGNNFRDPT 546
Score = 50.6 bits (104), Expect(3) = 2e-027
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = -1 / -1
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 312
P GSTVA+PDQ P S G +G SA ++ Q RS +TE H +P
Sbjct: 374 PPGSTVAEPDQHPLASNGEVGSSALPTSAQFTRSPETEWPHESVP 240
Score = 43.2 bits (88), Expect(3) = 2e-027
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = -1 / -1
Query: 629 VVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFWTW*LMS 486
+VGSR + + MTGL GF+HSR SGS F ATF T L++
Sbjct: 548 LVGSRKLLPVTSAGMGMTGLQLGFSHSRRSGSAGFLAKATFCTCTLLA 405
Score = 26.3 bits (51), Expect(4) = 4e-048
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1 / +1
Query: 445 GGGPVIMYTGVDHPDINYQ 501
GG P I+YTG+D + Q
Sbjct: 370 GGRPAILYTGIDANRVQVQ 426
>gb|CB882214.1|CB882214 HL01D13w HL Hordeum vulgare subsp. vulgare cDNA clone HL01D13
3-PRIME, mRNA sequence
Length = 624
Score = 155 bits (334), Expect(2) = 1e-047
Identities = 62/110 (56%), Positives = 78/110 (70%)
Frame = +1 / +3
Query: 313 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDGGGPVIMYTGVDHPDI 492
GN+ W HSVSRDL+NW AL+ AL P+ P D GCWSGSAT+LP G ++ ++ +
Sbjct: 159 GNLSWGHSVSRDLVNWDALDTALDPTAPFDSDGCWSGSATILPGGIPALLYTGRINATNK 338
Query: 493 NYQVQNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRG 642
QVQNVA+PKN +DPLLREWVKP++NPVI + +FRDPTTAW G
Sbjct: 339 EVQVQNVAFPKNPADPLLREWVKPAYNPVIPLPADVPGDKFRDPTTAWVG 488
Score = 59.3 bits (123), Expect(3) = 2e-025
Identities = 31/62 (50%), Positives = 33/62 (53%)
Frame = -1 / -3
Query: 686 PAALPTSSRHCSGPGPRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGSDTFFGYATF 507
P L ++ P QAVVGSRN MTGL GFTHSRSSGS F G ATF
Sbjct: 532 PPTLAATAMRHRPSRPTQAVVGSRNLSPGTSAGSGMTGL*AGFTHSRSSGSAGFLGKATF 353
Query: 506 WT 501
T
Sbjct: 352 CT 347
Score = 56.5 bits (117), Expect(3) = 2e-025
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1 / -3
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 312
P G VA+PDQQP S G +G SA S A+QL RSR+TE H LP
Sbjct: 292 PPGRMVAEPDQQPSESKGAVGSSAVSRASQLTRSRETE*PHERLP 158
Score = 56.1 bits (116), Expect(2) = 1e-047
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1 / +3
Query: 238 DPNAPMYYKGWYHFFYQYNPKGAVW 312
DPN PMY+ G YH FYQYNP GA+W
Sbjct: 78 DPNGPMYHNGVYHMFYQYNPLGAMW 152
Score = 39.1 bits (79), Expect(3) = 2e-025
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -1 / -3
Query: 311 HTAPLGLYW*KKWYHPL*YMGALGS 237
H AP GLYW* W PL Y+G GS
Sbjct: 151 HIAPSGLYW*NMW*TPLWYIGPFGS 77
>gb|AV923014.1|AV923014 AV923014 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd3f20 5', mRNA sequence
Length = 649
Score = 191 bits (412), Expect = 1e-047
Identities = 74/134 (55%), Positives = 94/134 (70%)
Frame = +1 / +1
Query: 910 DYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTA 1089
DYY VG Y A+ +VP+D R DYG+ YASK+F+DP+K RR+LWGWANESD+
Sbjct: 16 DYYVVGRYDDTADTFVPEDDGDCRSWRRLDYGHVYASKSFFDPSKNRRVLWGWANESDSL 195
Query: 1090 ADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTG 1269
ADD+ +GW+G+Q +PR +WLD GKQL QWPIEE+E LR K V L + AG E+ G
Sbjct: 196 ADDLVRGWSGVQTVPRKIWLDEDGKQLRQWPIEEIETLRNKRVNLLIPEVNAGGVNEIIG 375
Query: 1270 IQTAQADVEVSFEV 1311
I AQADVEV F++
Sbjct: 376 IVGAQADVEVMFQI 417
Score = 108 bits (231), Expect(2) = 2e-028
Identities = 61/127 (48%), Positives = 67/127 (52%)
Frame = -1 / -3
Query: 1301 LTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLGMAW 1122
+TSTSACA +P+ S PAL + R T LS S SSIGHC SC P SSH LG
Sbjct: 407 MTSTSACAPTMPMISFTPPALTSGISRFTRLFLSVSISSIGHCRSCLPSSSSHIFLGTV* 228
Query: 1121 IPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLPXXXXXXXXSPAGSSGTYRSA 942
P PL SSA +SDSLAQP RR L GS LDA P SSGT SA
Sbjct: 227 TPDHPLTRSSARLSDSLAQPQSTRRFLLGSKKDLDAYTWP*SRRRQLRQSPSSSGTKVSA 48
Query: 941 LGWYVPT 921
+ PT
Sbjct: 47 VSS*RPT 27
Score = 38.6 bits (78), Expect(2) = 2e-028
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = -3 / -2
Query: 1464 GSLLAVGGGQHPQPERPHAAPHVRALHAAQ 1375
G LL V GG QPER AA H RAL AAQ
Sbjct: 564 GVLLHVAGGHDEQPERADAARHRRALLAAQ 475
>gb|AV926810.1|AV926810 AV926810 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd23n16 5', mRNA sequence
Length = 623
Score = 191 bits (412), Expect = 1e-047
Identities = 74/134 (55%), Positives = 94/134 (70%)
Frame = +1 / +3
Query: 910 DYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTA 1089
DYY VG Y A+ +VP+D R DYG+ YASK+F+DP+K RR+LWGWANESD+
Sbjct: 15 DYYVVGRYDDTADTFVPEDDGDCRSWRRLDYGHVYASKSFFDPSKNRRVLWGWANESDSL 194
Query: 1090 ADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTG 1269
ADD+ +GW+G+Q +PR +WLD GKQL QWPIEE+E LR K V L + AG E+ G
Sbjct: 195 ADDLVRGWSGVQTVPRKIWLDEDGKQLRQWPIEEIETLRNKRVNLLIPEVNAGGVNEIIG 374
Query: 1270 IQTAQADVEVSFEV 1311
I AQADVEV F++
Sbjct: 375 IVGAQADVEVMFQI 416
Score = 108 bits (231), Expect(2) = 4e-032
Identities = 61/127 (48%), Positives = 67/127 (52%)
Frame = -1 / -2
Query: 1301 LTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLGMAW 1122
+TSTSACA +P+ S PAL + R T LS S SSIGHC SC P SSH LG
Sbjct: 406 MTSTSACAPTMPMISFTPPALTSGISRFTRLFLSVSISSIGHCRSCLPSSSSHIFLGTV* 227
Query: 1121 IPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLPXXXXXXXXSPAGSSGTYRSA 942
P PL SSA +SDSLAQP RR L GS LDA P SSGT SA
Sbjct: 226 TPDHPLTRSSARLSDSLAQPQSTRRFLLGSKKDLDAYTWP*SRRRQLRQSPSSSGTKVSA 47
Query: 941 LGWYVPT 921
+ PT
Sbjct: 46 VSS*RPT 26
Score = 51.0 bits (105), Expect(2) = 4e-032
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -1 / -2
Query: 1487 LNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 1377
LNT K TAV S EA T SPNGPT P T A F+PH
Sbjct: 586 LNTRKKTAVCSCMSPEAMTSSPNGPTLPGTDAPFSPH 476
>gb|BQ463718.1|BQ463718 HG01D14r HG Hordeum vulgare subsp. vulgare cDNA clone HG01D14
5-PRIME, mRNA sequence
Length = 487
Score = 191 bits (412), Expect = 1e-047
Identities = 74/134 (55%), Positives = 94/134 (70%)
Frame = +1 / +2
Query: 910 DYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTA 1089
DYY VG Y A+ +VP+D R DYG+ YASK+F+DP+K RR+LWGWANESD+
Sbjct: 41 DYYVVGRYDDTADTFVPEDDGDCRSWRRLDYGHVYASKSFFDPSKNRRVLWGWANESDSL 220
Query: 1090 ADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTG 1269
ADD+ +GW+G+Q +PR +WLD GKQL QWPIEE+E LR K V L + AG E+ G
Sbjct: 221 ADDLVRGWSGVQTVPRKIWLDEDGKQLRQWPIEEIETLRNKRVNLLIPEVNAGGVNEIIG 400
Query: 1270 IQTAQADVEVSFEV 1311
I AQADVEV F++
Sbjct: 401 IVGAQADVEVMFQI 442
Score = 108 bits (231), Expect = 9e-023
Identities = 61/127 (48%), Positives = 67/127 (52%)
Frame = -1 / -2
Query: 1301 LTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLGMAW 1122
+TSTSACA +P+ S PAL + R T LS S SSIGHC SC P SSH LG
Sbjct: 432 MTSTSACAPTMPMISFTPPALTSGISRFTRLFLSVSISSIGHCRSCLPSSSSHIFLGTV* 253
Query: 1121 IPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLPXXXXXXXXSPAGSSGTYRSA 942
P PL SSA +SDSLAQP RR L GS LDA P SSGT SA
Sbjct: 252 TPDHPLTRSSARLSDSLAQPQSTRRFLLGSKKDLDAYTWP*SRRRQLRQSPSSSGTKVSA 73
Query: 941 LGWYVPT 921
+ PT
Sbjct: 72 VSS*RPT 52
>gb|AL505127.1|AL505127 AL505127 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07H17V 5', mRNA sequence
Length = 650
Score = 189 bits (408), Expect = 4e-047
Identities = 73/134 (54%), Positives = 93/134 (69%)
Frame = +1 / +1
Query: 910 DYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTA 1089
DYY VG Y + +VP+D R DYG+ YASK+F+DP+K RR+LWGWANESD+
Sbjct: 4 DYYVVGRYDDTXDTFVPEDDGDCRSWRRLDYGHVYASKSFFDPSKNRRVLWGWANESDSL 183
Query: 1090 ADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTG 1269
ADD+ +GW+G+Q +PR +WLD GKQL QWPIEE+E LR K V L + AG E+ G
Sbjct: 184 ADDLVRGWSGVQTVPRKIWLDEDGKQLRQWPIEEIETLRNKRVNLLIPEVNAGGVNEIIG 363
Query: 1270 IQTAQADVEVSFEV 1311
I AQADVEV F++
Sbjct: 364 IVGAQADVEVMFQI 405
Score = 106 bits (227), Expect(2) = 1e-031
Identities = 60/127 (47%), Positives = 66/127 (51%)
Frame = -1 / -1
Query: 1301 LTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSHTVLGMAW 1122
+TSTSACA +P+ S PAL + R T LS S SSIGHC SC P SSH LG
Sbjct: 395 MTSTSACAPTMPMISFTPPALTSGISRFTRLFLSVSISSIGHCRSCLPSSSSHIFLGTV* 216
Query: 1121 IPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLPXXXXXXXXSPAGSSGTYRSA 942
P PL SSA +SDSLAQP RR L GS LDA P SSGT S
Sbjct: 215 TPDHPLTRSSARLSDSLAQPQSTRRFLLGSKKDLDAYTWP*SRRRQLRQSPSSSGTKVSX 36
Query: 941 LGWYVPT 921
+ PT
Sbjct: 35 VSS*RPT 15
Score = 51.0 bits (105), Expect(2) = 1e-031
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -1 / -1
Query: 1487 LNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 1377
LNT K TAV S EA T SPNGPT P T A F+PH
Sbjct: 575 LNTRKKTAVCSCMSPEAMTSSPNGPTLPGTDAPFSPH 465
>gb|BG301302.1|BG301302 HVSMEb0020J07f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0020J07f, mRNA sequence
Length = 913
Score = 86.8 bits (183), Expect(3) = 3e-046
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +1 / +3
Query: 196 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVW 312
RTG+HFQP K + NDPN P+YY GWYH FYQYNP G+VW
Sbjct: 186 RTGFHFQPDKYYQNDPNGPVYYGGWYHLFYQYNPSGSVW 302
Score = 82.2 bits (173), Expect(3) = 3e-046
Identities = 35/93 (37%), Positives = 45/93 (48%)
Frame = +1 / +3
Query: 511 VAYPKNVSDPLLREWVKPSHNPVIVPEGGINATQFRDPTTAWRGPGPEQWRLLVGSAAGS 690
+A P + SDPLLREWVK NPV+ P GI FRDPTTAW WR ++GS +
Sbjct: 495 LAEPADPSDPLLREWVKHPANPVVFPPTGIGMNDFRDPTTAWFDASDGTWRTIIGSKNDT 674
Query: 691 SPRGVAYVYXXXXXXXXXXXXXPLHSAPTGMWE 789
G+ + Y ++ P G E
Sbjct: 675 DHSGIVFSYKTNDFVSYELMPRYMYRGPKGTGE 773
Score = 69.8 bits (146), Expect(3) = 1e-025
Identities = 26/38 (68%), Positives = 27/38 (71%)
Frame = -1 / -1
Query: 311 HTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKWYPV 198
HT P GLYW* KWYHP *Y G LGS +L GWKW PV
Sbjct: 301 HTDPDGLYW*NKWYHPP*YTGPLGSFW*YLSGWKWKPV 188
Score = 56.5 bits (117), Expect(3) = 3e-046
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +1 / +3
Query: 319 IVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
IVW H+VS+DLI+W L PAL P D G +GS TVLPDG
Sbjct: 312 IVWGHAVSKDLIHWRHLPPALVPDQWYDIKGVLTGSITVLPDG 440
Score = 46.4 bits (95), Expect(3) = 1e-025
Identities = 22/47 (46%), Positives = 22/47 (46%)
Frame = -1 / -1
Query: 674 PTSSRHCSGPGPRQAVVGSRNCVALMPPSGTMTGLCEGFTHSRSSGS 534
P RH AVVGSR MP G TG FTHSR SGS
Sbjct: 658 PMMVRHVPSEASNHAVVGSRKSFIPMPVGGNTTGFAGCFTHSRRSGS 518
Score = 39.6 bits (80), Expect(3) = 1e-025
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = -1 / -1
Query: 446 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTM 318
PSGSTV +P P +S G AG Q +RS DT HT+
Sbjct: 439 PSGSTVMEPVSTPLMSYHWSGTKAGGRWRQWIRSLDTAWPHTI 311
>gb|BF260867.2|BF260867 HVSMEf0023C11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0023C11f, mRNA sequence
Length = 750
Score = 101 bits (216), Expect(4) = 8e-046
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = +1 / +2
Query: 1585 VDTDISNGKISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKV 1764
+D + G ISLR+L+D SVVESFG GG+TCI +RVYP + ++ LYVFNNG VKV
Sbjct: 443 MDIEAQGGSISLRTLVDHSVVESFGGGGRTCITARVYPDHVVNGNSHLYVFNNGTGAVKV 622
Query: 1765 SRLTAWEMKKPVMN 1806
S L AWEM +N
Sbjct: 623 SSLDAWEMATATVN 664
Score = 74.4 bits (156), Expect(3) = 1e-028
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = +1 / +2
Query: 1141 VWLDPSGKQLLQWPIEEVEALRAKSVTLKNRVIKAGHHVEVTGIQTAQADVEVSFEV 1311
+WLD GKQL QWPIEE+E LR K V L + AG E+ GI AQADVEV F++
Sbjct: 5 IWLDEDGKQLRQWPIEEIETLRNKRVNLLIPEVNAGGVNEIIGIVGAQADVEVMFQI 175
Score = 69.8 bits (146), Expect(4) = 8e-046
Identities = 32/68 (47%), Positives = 41/68 (60%)
Frame = +1 / +2
Query: 1285 ADVEVSFEVSPSALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERT 1464
A +V AL A+ L+P + + LCG K A V G VGPFGL V+AS + +E T
Sbjct: 143 AQADVEVMFQIPALEHADVLEPNWLLNPQSLCGEKGASVPGSVGPFGLLVMASGDMQEHT 322
Query: 1465 AVFFRVFK 1488
AVFFRVF+
Sbjct: 323 AVFFRVFR 346
Score = 66.1 bits (138), Expect(4) = 6e-035
Identities = 32/63 (50%), Positives = 37/63 (58%)
Frame = -3 / -3
Query: 1806 VHDRLLHLPRGETGHLDVRPPVVEHVEASVLADGQRRVDPGEDAGLAPGSEALNDRSVDQ 1627
VH R HLPR E GHLD VVEHV+ +V RV P DA A +EAL+ R VDQ
Sbjct: 664 VHGRRRHLPRVEAGHLDGAGAVVEHVQVAVAVHDVVRVHPRRDARPAAAAEALHHRVVDQ 485
Query: 1626 ASQ 1618
S+
Sbjct: 484 CSE 476
Score = 65.2 bits (136), Expect(3) = 1e-028
Identities = 30/73 (41%), Positives = 40/73 (54%)
Frame = +3 / +1
Query: 1590 HGHLERQDIPEKPDRPIGR*ELRSRGQDLHPLQGLPVAGHRQGRSPLRVQQREGARQGVP 1769
H Q + + RP+G ELR R QD+H +G+P + + P+RVQQR RQGV
Sbjct: 448 HRGARGQHLAQNTGRPLGGGELRRRRQDVHHGEGVPGPRRERQQPPVRVQQRHRRRQGVQ 627
Query: 1770 SHRVGDEEAGHER 1808
RVGD + ER
Sbjct: 628 PRRVGDGDGDRER 666
Score = 62.9 bits (131), Expect(4) = 6e-035
Identities = 29/53 (54%), Positives = 33/53 (62%)
Frame = -1 / -1
Query: 1301 LTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCNSCFPLGSSH 1143
+TSTSACA +P+ S PAL + R T LS S SSIGHC SC P SSH
Sbjct: 165 MTSTSACAPTMPMISFTPPALTSGISRFTRLFLSVSISSIGHCRSCLPSSSSH 7
Score = 51.0 bits (105), Expect(4) = 6e-035
Identities = 24/37 (64%), Positives = 24/37 (64%)
Frame = -3 / -3
Query: 1485 EHPEEHRGSLLAVGGGQHPQPERPHAAPHVRALHAAQ 1375
EHPEE G LL V GG QPER AA H RAL AAQ
Sbjct: 343 EHPEEDGGVLLHVAGGHDEQPERADAARHRRALLAAQ 233
Score = 45.1 bits (92), Expect(4) = 8e-046
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1 / +2
Query: 1501 DKPVVLMCTDPTKSSQNPNLYRPTFAGFVDTDI 1599
DK VLMCTD +KSS +Y+P + FVD DI
Sbjct: 353 DKYKVLMCTDLSKSSTRDGVYKPPYGAFVDMDI 451
Score = 32.7 bits (65), Expect(3) = 1e-028
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2 / +3
Query: 1514 CSCAPTLPSRPRTRTCTARHLQDLSTRTSR 1603
CSCAPT SR CT+R T TSR
Sbjct: 366 CSCAPTSRSRAPETACTSRRTGPSWTWTSR 455
Score = 24.9 bits (48), Expect(4) = 8e-046
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2 / +3
Query: 1139 RCGWTPAGSSCCSG 1180
R GWT SSC SG
Sbjct: 3 RYGWTKTASSCGSG 44
Score = 24.4 bits (47), Expect(4) = 6e-035
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -1 / -1
Query: 1598 MSVSTNPANVGRYRFGFWDDLVGSVHMSTTGLS 1500
MS+ST G Y D SVHMST LS
Sbjct: 450 MSMSTKAPYGGLYTPSLVLDFERSVHMSTLYLS 352
>gb|AL503000.1|AL503000 AL503000 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09G14u 3', mRNA sequence
Length = 595
Score = 184 bits (396), Expect = 2e-045
Identities = 76/88 (86%), Positives = 82/88 (93%)
Frame = +1 / -3
Query: 1552 PNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLY 1731
P LY+PTFAGFVDTDIS+GKISLRSLIDRSVVESFGAGGKTCILSRVYPS+AIGKDA LY
Sbjct: 518 PGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAHLY 339
Query: 1732 VFNNGRAHVKVSRLTAWEMKKPVMNGA* 1815
VFNNG +KVS+L AWEMKKP+MNGA*
Sbjct: 338 VFNNGETDIKVSQLKAWEMKKPMMNGA* 255
Score = 144 bits (309), Expect = 2e-033
Identities = 64/87 (73%), Positives = 71/87 (81%)
Frame = -1 / +1
Query: 1811 APFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRS 1632
APF+ GFFISHA+ DTL PLLNT*R AS P+A DG TLERMQV PPAPKLSTT+RS
Sbjct: 259 APFIMGFFISHALSWDTLISVSPLLNT*RCASFPIAMDGYTLERMQVFPPAPKLSTTERS 438
Query: 1631 IRLLRDILPFEMSVSTNPANVGRYRFG 1551
I+LL++I P EMSVSTNPANVG YR G
Sbjct: 439 IKLLKEIFPDEMSVSTNPANVGLYRPG 519
>gb|BI951140.1|BI951140 HVSMEl0024K02f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0024K02f, mRNA sequence
Length = 877
Score = 183 bits (395), Expect = 2e-045
Identities = 70/102 (68%), Positives = 76/102 (74%)
Frame = +1 / +1
Query: 142 EAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNI 321
EA A VP NPLLRTGYHFQPPKNWINDPN P+YYKGW H FYQYNP+GA W N
Sbjct: 139 EAVAPLPSVPGGGTNPLLRTGYHFQPPKNWINDPNGPLYYKGWCHLFYQYNPRGADWVNT 318
Query: 322 VWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 447
+WAHS SRDLINW L AL P+I D YG W+GSAT+L DG
Sbjct: 319 LWAHSGSRDLINWNLLGLALEPNIRPDNYGVWAGSATILLDG 444
Score = 133 bits (286), Expect(2) = 5e-031
Identities = 59/101 (58%), Positives = 66/101 (65%)
Frame = -1 / -3
Query: 467 YMITGPPPSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLY 288
Y T PS VA+P P LS M G A QLMRSR+ E A ++L +APLGLY
Sbjct: 464 YSPTSGVPSRRIVAEPAHTP*LSGRMFGSRAKPRRFQLMRSREPE*AQSVLTQSAPLGLY 285
Query: 287 W*KKWYHPL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 165
W* KW+HPL*Y G GSLIQFLGGWKWYPVLS+GL GT
Sbjct: 284 W*NKWHHPL*YSGPFGSLIQFLGGWKWYPVLSKGLVPPPGT 162
Score = 22.1 bits (42), Expect(2) = 5e-031
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1 / -3
Query: 107 DAPASCNSSSKH 72
DAPASC SS +
Sbjct: 122 DAPASCRRSSSN 87
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 868,071,129
Number of Sequences: 312970
Number of extensions: 15784737
Number of successful extensions: 186561
Number of sequences better than 1.0e-020: 223
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 25757713179
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)