TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493944.2.1
(2055 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|AJ534447.1|HVU534447 Hordeum vulgare mRNA for apoplasti... 280 0.0
gb|BQ764136.1|BQ764136 EBro03_SQ006_J10_R root, 3 week, wat... 208 e-109
gb|BF264866.2|BF264866 HV_CEa0010J14f Hordeum vulgare seedl... 232 e-103
gb|CK122199.1|CK122199 BES1824102c17 BES1824 Hordeum vulgar... 280 e-100
emb|AJ567377.2|HVU567377 Hordeum vulgare partial mRNA for s... 90 8e-098
gb|BI778225.2|BI778225 EBro07_SQ002_J10_R root, 3 week, red... 232 4e-095
gb|BF625535.2|BF625535 HVSMEa0011C02f Hordeum vulgare seedl... 232 3e-090
gb|BF255160.2|BF255160 HVSMEf0006B22f Hordeum vulgare seedl... 151 2e-089
gb|BE214358.2|BE214358 HV_CEb0003D11f Hordeum vulgare seedl... 232 7e-088
emb|X83233.1|HVSF6FT Hordeum vulgare mRNA for sucrose:fruct... 91 7e-085
gb|BU994370.1|BU994370 HM06N08r HM Hordeum vulgare subsp. v... 248 7e-084
gb|BF260173.2|BF260173 HVSMEf0021E20f Hordeum vulgare seedl... 205 4e-082
gb|BQ762965.1|BQ762965 EBro02_SQ006_O16_R root, 3 week, hyd... 200 5e-081
emb|A48280.1| Sequence 1 from Patent WO9601904 91 5e-080
gb|AV924971.1|AV924971 AV924971 K. Sato unpublished cDNA li... 208 7e-078
gb|BE559132.2|BE559132 HV_CEb0023A11f Hordeum vulgare seedl... 164 1e-071
gb|BU973477.1|BU973477 HB25B07r BC Hordeum vulgare subsp. v... 199 1e-071
gb|BF064963.3|BF064963 HV_CEb0022D03f Hordeum vulgare seedl... 216 3e-071
gb|BU996678.1|BU996678 HM14G07r HM Hordeum vulgare subsp. v... 186 6e-070
gb|AV924972.1|AV924972 AV924972 K. Sato unpublished cDNA li... 208 6e-069
gb|AL505748.1|AL505748 AL505748 Hordeum vulgare Barke roots... 205 1e-068
gb|BF267660.3|BF267660 HV_CEa0018I16f Hordeum vulgare seedl... 208 1e-067
gb|BQ468801.1|BQ468801 HM02G04r HM Hordeum vulgare subsp. v... 114 2e-065
gb|BE559434.1|BE559434 HV_CEb0024K20f Hordeum vulgare seedl... 232 2e-061
gb|BJ467660.1|BJ467660 BJ467660 K. Sato unpublished cDNA li... 216 1e-058
gb|BF628700.2|BF628700 HVSMEb0007E05f Hordeum vulgare seedl... 161 5e-058
gb|BJ457246.1|BJ457246 BJ457246 K. Sato unpublished cDNA li... 216 7e-058
gb|BJ449827.1|BJ449827 BJ449827 K. Sato unpublished cDNA li... 216 4e-057
gb|BF258913.2|BF258913 HVSMEf0017A16f Hordeum vulgare seedl... 92 3e-056
gb|BQ471962.1|BQ471962 HV04A04r HV Hordeum vulgare subsp. v... 92 3e-056
gb|BQ768116.1|BQ768116 EBro08_SQ010_A24_R root, 3 week, dro... 92 1e-055
gb|BE558756.2|BE558756 HV_CEb0020F02f Hordeum vulgare seedl... 80 3e-054
gb|BF065803.2|BF065803 HV_CEb0014A16f Hordeum vulgare seedl... 130 5e-053
gb|BU995607.1|BU995607 HM10M18r HM Hordeum vulgare subsp. v... 80 8e-053
gb|BQ468711.1|BQ468711 HM02B12r HM Hordeum vulgare subsp. v... 208 8e-053
gb|CA019964.1|CA019964 HV13O24r HV Hordeum vulgare subsp. v... 152 3e-052
gb|BQ468810.1|BQ468810 HM02G15r HM Hordeum vulgare subsp. v... 179 1e-051
gb|BF256656.2|BF256656 HVSMEf0010J22f Hordeum vulgare seedl... 102 4e-051
gb|AV924542.1|AV924542 AV924542 K. Sato unpublished cDNA li... 199 5e-050
gb|BF627833.2|BF627833 HVSMEb0005O19f Hordeum vulgare seedl... 92 6e-050
gb|AV923014.1|AV923014 AV923014 K. Sato unpublished cDNA li... 191 1e-047
gb|AV926810.1|AV926810 AV926810 K. Sato unpublished cDNA li... 191 1e-047
gb|BQ463718.1|BQ463718 HG01D14r HG Hordeum vulgare subsp. v... 191 1e-047
gb|AL505127.1|AL505127 AL505127 Hordeum vulgare Barke roots... 189 4e-047
gb|BF254630.1|BF254630 HVSMEf0004I24f Hordeum vulgare seedl... 88 4e-047
gb|CB882214.1|CB882214 HL01D13w HL Hordeum vulgare subsp. v... 152 9e-047
gb|BG301302.1|BG301302 HVSMEb0020J07f Hordeum vulgare seedl... 87 5e-046
gb|AL503000.1|AL503000 AL503000 Hordeum vulgare Barke roots... 186 5e-046
gb|BF260867.2|BF260867 HVSMEf0023C11f Hordeum vulgare seedl... 101 9e-046
gb|BI951140.1|BI951140 HVSMEl0024K02f Hordeum vulgare spike... 183 2e-045
gb|AV930059.1|AV930059 AV930059 K. Sato unpublished cDNA li... 181 2e-044
gb|BG343465.2|BG343465 HVSMEg0005N10f Hordeum vulgare pre-a... 165 2e-044
gb|BQ767484.1|BQ767484 EBro08_SQ009_D05_R root, 3 week, dro... 180 2e-044
gb|AL507250.1|AL507250 AL507250 Hordeum vulgare Barke devel... 144 3e-044
gb|BQ464712.1|BQ464712 HU01A19T HU Hordeum vulgare subsp. v... 136 4e-044
gb|AV923941.1|AV923941 AV923941 K. Sato unpublished cDNA li... 178 1e-043
gb|BQ468675.1|BQ468675 HM01P04T HM Hordeum vulgare subsp. v... 101 1e-043
gb|BQ468368.1|BQ468368 HM01B03T HM Hordeum vulgare subsp. v... 92 2e-043
gb|CA014245.1|CA014245 HT10M21r HT Hordeum vulgare subsp. v... 88 3e-043
gb|BQ466424.1|BQ466424 HT02H23r HT Hordeum vulgare subsp. v... 157 3e-043
gb|BF267767.3|BF267767 HV_CEa0018N10f Hordeum vulgare seedl... 152 9e-043
gb|BG343198.2|BG343198 HVSMEg0005B02f Hordeum vulgare pre-a... 92 3e-042
gb|AV933837.1|AV933837 AV933837 K. Sato unpublished cDNA li... 106 5e-042
gb|CA020717.1|CA020717 HZ37F12r HZ Hordeum vulgare subsp. v... 114 1e-041
gb|BJ472857.1|BJ472857 BJ472857 K. Sato unpublished cDNA li... 106 2e-041
gb|AV932394.1|AV932394 AV932394 K. Sato unpublished cDNA li... 106 2e-041
gb|AV923840.1|AV923840 AV923840 K. Sato unpublished cDNA li... 115 3e-041
gb|CA019675.1|CA019675 HV12L20r HV Hordeum vulgare subsp. v... 118 4e-041
gb|BI952001.1|BI952001 HVSMEm0004C17f Hordeum vulgare green... 169 4e-041
gb|BG417552.2|BG417552 HVSMEk0018A17f Hordeum vulgare testa... 77 1e-040
gb|BQ467608.1|BQ467608 HS04F05r HS Hordeum vulgare subsp. v... 151 2e-040
gb|AJ434754.1|AJ434754 AJ434754 S00002 Hordeum vulgare subs... 166 3e-040
gb|BQ760946.1|BQ760946 EBro03_SQ003_O23_R root, 3 week, wat... 166 3e-040
gb|AL507193.1|AL507193 AL507193 Hordeum vulgare Barke devel... 79 7e-040
gb|AL507249.1|AL507249 AL507249 Hordeum vulgare Barke devel... 81 3e-039
gb|AV933740.1|AV933740 AV933740 K. Sato unpublished cDNA li... 106 4e-039
gb|AV934074.1|AV934074 AV934074 K. Sato unpublished cDNA li... 106 2e-038
gb|AL503455.1|AL503455 AL503455 Hordeum vulgare Barke roots... 82 4e-038
gb|AV933741.1|AV933741 AV933741 K. Sato unpublished cDNA li... 106 5e-038
gb|BF259635.2|BF259635 HVSMEf0019N16f Hordeum vulgare seedl... 87 7e-038
gb|CA021243.1|CA021243 HZ39I13r HZ Hordeum vulgare subsp. v... 109 7e-038
gb|BI776273.2|BI776273 EBem04_SQ001_F05_R embryo, 12 DPA, n... 85 1e-037
gb|BI953662.1|BI953662 HVSMEm0013M11f Hordeum vulgare green... 148 2e-037
gb|BJ469279.1|BJ469279 BJ469279 K. Sato unpublished cDNA li... 106 4e-037
gb|BJ469491.1|BJ469491 BJ469491 K. Sato unpublished cDNA li... 106 6e-037
gb|AV930060.1|AV930060 AV930060 K. Sato unpublished cDNA li... 155 1e-036
gb|BI947239.1|BI947239 HVSMEl0004J14f Hordeum vulgare spike... 67 1e-036
gb|BM100630.2|BM100630 EBma01_SQ005_M12_R maternal, 4 DPA, ... 81 1e-036
emb|AJ534444.1|HVU534444 Hordeum vulgare partial mRNA for a... 136 3e-036
gb|BF254985.2|BF254985 HVSMEf0005J22f Hordeum vulgare seedl... 70 4e-036
gb|AL450603.1|AL450603 AL450603 Hordeum vulgare Barke etiol... 152 6e-036
gb|BJ469356.1|BJ469356 BJ469356 K. Sato unpublished cDNA li... 106 8e-036
gb|AV933260.1|AV933260 AV933260 K. Sato unpublished cDNA li... 109 1e-035
gb|AV932241.1|AV932241 AV932241 K. Sato unpublished cDNA li... 109 1e-035
gb|BQ465125.1|BQ465125 HU02L17r HU Hordeum vulgare subsp. v... 135 2e-035
gb|CA021289.1|CA021289 HZ39K13r HZ Hordeum vulgare subsp. v... 91 3e-035
gb|CA025895.1|CA025895 HZ53H06r HZ Hordeum vulgare subsp. v... 81 1e-034
gb|BF254441.2|BF254441 HVSMEf0004A12f Hordeum vulgare seedl... 105 2e-034
gb|BJ463690.1|BJ463690 BJ463690 K. Sato unpublished cDNA li... 74 3e-034
gb|BG344005.2|BG344005 HVSMEg0007F22f Hordeum vulgare pre-a... 85 6e-034
gb|BQ468522.1|BQ468522 HM01H24T HM Hordeum vulgare subsp. v... 74 2e-033
gb|BF254647.2|BF254647 HVSMEf0004K01f Hordeum vulgare seedl... 92 2e-033
gb|BF630067.2|BF630067 HVSMEb0007N12f Hordeum vulgare seedl... 80 2e-033
gb|CA026965.1|CA026965 HZ57H19r HZ Hordeum vulgare subsp. v... 136 2e-033
gb|AV932388.1|AV932388 AV932388 K. Sato unpublished cDNA li... 77 3e-033
gb|BQ469569.1|BQ469569 HZ01D05r HZ Hordeum vulgare subsp. v... 136 4e-033
gb|AV934254.1|AV934254 AV934254 K. Sato unpublished cDNA li... 77 2e-032
gb|BI950277.1|BI950277 HVSMEl0020B05f Hordeum vulgare spike... 140 2e-032
gb|CV061217.1|CV061217 BNEL66c2 Barley EST endosperm librar... 89 3e-032
gb|BQ764647.1|BQ764647 EBca01_SQ004_A18_R carpel, pre-anthe... 94 9e-032
gb|BF257665.2|BF257665 HVSMEf0013I03f Hordeum vulgare seedl... 86 9e-032
gb|AV926089.1|AV926089 AV926089 K. Sato unpublished cDNA li... 80 1e-031
gb|BF253435.2|BF253435 HVSMEf0001G15f Hordeum vulgare seedl... 72 1e-031
gb|AV932172.1|AV932172 AV932172 K. Sato unpublished cDNA li... 106 3e-031
gb|BQ662821.1|BQ662821 HS04F05u HS Hordeum vulgare subsp. v... 58 4e-031
gb|BE455593.2|BE455593 HVSMEg0017P19f Hordeum vulgare pre-a... 106 4e-031
gb|BQ465277.1|BQ465277 HU03C15r HU Hordeum vulgare subsp. v... 68 5e-031
gb|CA022519.1|CA022519 HZ43H14r HZ Hordeum vulgare subsp. v... 136 5e-031
gb|BE060860.3|BE060860 HVSMEg0013J24f Hordeum vulgare pre-a... 68 1e-030
gb|BU996531.1|BU996531 HM13O15r HM Hordeum vulgare subsp. v... 134 2e-030
gb|BQ468963.1|BQ468963 HM02P04r HM Hordeum vulgare subsp. v... 91 3e-030
gb|AV934053.1|AV934053 AV934053 K. Sato unpublished cDNA li... 106 3e-030
gb|CA028144.1|CA028144 HZ61C03r HZ Hordeum vulgare subsp. v... 94 4e-030
gb|BF258931.3|BF258931 HVSMEf0017B15f Hordeum vulgare seedl... 67 1e-029
gb|BF263973.2|BF263973 HV_CEa0008D03f Hordeum vulgare seedl... 84 4e-029
gb|AV934255.1|AV934255 AV934255 K. Sato unpublished cDNA li... 77 6e-029
gb|BJ471912.1|BJ471912 BJ471912 K. Sato unpublished cDNA li... 77 8e-029
gb|CA003228.1|CA003228 HS09M20r HS Hordeum vulgare subsp. v... 65 8e-029
gb|CA023969.1|CA023969 HZ47P18r HZ Hordeum vulgare subsp. v... 121 1e-028
gb|BE420989.1|BE420989 HWM004.F06 ITEC HWM Barley Leaf Libr... 101 2e-028
gb|CA018370.1|CA018370 HV08G21r HV Hordeum vulgare subsp. v... 94 4e-028
gb|BJ472753.1|BJ472753 BJ472753 K. Sato unpublished cDNA li... 95 1e-027
gb|AJ436198.1|AJ436198 AJ436198 S00002 Hordeum vulgare subs... 58 1e-027
gb|AL505004.1|AL505004 AL505004 Hordeum vulgare Barke roots... 95 1e-027
gb|AV928934.1|AV928934 AV928934 K. Sato unpublished cDNA li... 101 2e-027
gb|CA030695.1|CA030695 HX07N13r HX Hordeum vulgare subsp. v... 101 2e-027
gb|CA022691.1|CA022691 HZ44B09r HZ Hordeum vulgare subsp. v... 84 2e-027
gb|CA025842.1|CA025842 HZ53E21r HZ Hordeum vulgare subsp. v... 84 2e-027
gb|BJ473032.1|BJ473032 BJ473032 K. Sato unpublished cDNA li... 76 2e-027
gb|CB881780.1|CB881780 HM10N17w HM Hordeum vulgare subsp. v... 101 6e-027
gb|BQ756791.1|BQ756791 EBem09_SQ003_M05_R embryo, 1 Day ger... 60 7e-027
gb|BG418156.1|BG418156 HVSMEk0021K05f Hordeum vulgare testa... 80 9e-027
gb|BF262904.3|BF262904 HV_CEa0005E13f Hordeum vulgare seedl... 80 3e-026
gb|BG344434.1|BG344434 HVSMEg0009E05f Hordeum vulgare pre-a... 90 5e-026
gb|BF626291.2|BF626291 HVSMEa0018E06f Hordeum vulgare seedl... 91 5e-026
gb|AV911648.1|AV911648 AV911648 K. Sato unpublished cDNA li... 61 8e-026
gb|BI958333.1|BI958333 HVSMEn0014H06f Hordeum vulgare rachi... 76 1e-025
gb|BI959253.1|BI959253 HVSMEn0018O17f Hordeum vulgare rachi... 105 1e-025
gb|AV932645.1|AV932645 AV932645 K. Sato unpublished cDNA li... 76 2e-025
gb|BF254279.2|BF254279 HVSMEf0003I12f Hordeum vulgare seedl... 113 2e-025
gb|BJ472162.1|BJ472162 BJ472162 K. Sato unpublished cDNA li... 62 8e-025
gb|CB882529.1|CB882529 HL02C03w HL Hordeum vulgare subsp. v... 95 9e-025
gb|BQ665811.1|BQ665811 HZ01D05u HZ Hordeum vulgare subsp. v... 95 9e-025
gb|CB879899.1|CB879899 HP08F21T HP Hordeum vulgare subsp. v... 95 9e-025
gb|BQ661204.1|BQ661204 HM02G15u HM Hordeum vulgare subsp. v... 114 2e-024
gb|AF210722.1|AF210722 Hordeum vulgare variety Morex sucros... 78 4e-024
gb|CA020832.1|CA020832 HZ37P12r HZ Hordeum vulgare subsp. v... 77 6e-024
gb|AF210723.1|AF210723 Hordeum vulgare variety Steptoe sucr... 77 8e-024
gb|AJ434586.1|AJ434586 AJ434586 S00002 Hordeum vulgare subs... 91 1e-023
gb|AL503287.1|AL503287 AL503287 Hordeum vulgare Barke roots... 52 1e-023
gb|BJ469224.1|BJ469224 BJ469224 K. Sato unpublished cDNA li... 62 4e-023
gb|BJ462585.1|BJ462585 BJ462585 K. Sato unpublished cDNA li... 70 2e-022
gb|AV922576.1|AV922576 AV922576 K. Sato unpublished cDNA li... 61 3e-022
gb|AV917398.1|AV917398 AV917398 K. Sato unpublished cDNA li... 61 3e-022
gb|CB875288.1|CB875288 HX07N13w HX Hordeum vulgare subsp. v... 101 5e-022
gb|CA002321.1|CA002321 HS07C10r HS Hordeum vulgare subsp. v... 94 5e-022
gb|BM816245.1|BM816245 HB106H11_SK.ab1 HB Hordeum vulgare s... 59 6e-022
gb|BI960418.1|BI960418 HVSMEn0024I13f Hordeum vulgare rachi... 102 6e-022
gb|BQ754305.1|BQ754305 EBca01_SQ003_I07_R carpel, pre-anthe... 105 9e-022
gb|AV909746.1|AV909746 AV909746 K. Sato unpublished cDNA li... 61 3e-021
gb|CD240714.1|CD240714 LP10313 Lemma/palea-enriched cDNA li... 61 5e-021
gb|BF255430.3|BF255430 HVSMEf0006N10f Hordeum vulgare seedl... 50 6e-021
gb|BJ466158.1|BJ466158 BJ466158 K. Sato unpublished cDNA li... 58 7e-021
gb|BJ462524.1|BJ462524 BJ462524 K. Sato unpublished cDNA li... 58 7e-021
gb|BM816244.1|BM816244 HB106H10_SK.ab1 HB Hordeum vulgare s... 55 9e-021
>emb|AJ534447.1|HVU534447 Hordeum vulgare mRNA for apoplastic invertase 1 (cwinw1 gene)
Length = 2095
Score = 280 bits (606), Expect(9) = 0.0
Identities = 108/126 (85%), Positives = 115/126 (91%)
Frame = -1 / +3
Query: 1206 GLETSVPPGPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFY 1027
GL+TSV GPRVKHVLKNSLDLRRYDYYTVGTY + ERYVPD+PAGDEH LRYDYGNFY
Sbjct: 840 GLDTSVVSGPRVKHVLKNSLDLRRYDYYTVGTYDRKTERYVPDNPAGDEHHLRYDYGNFY 1019
Query: 1026 ASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEV 847
ASKTFYDP KRRRILWGWANESD A DDVAKGWAGIQAIPR VWLDPSG+QL+QWP+EE+
Sbjct: 1020 ASKTFYDPVKRRRILWGWANESDAAVDDVAKGWAGIQAIPRKVWLDPSGRQLMQWPVEEL 1199
Query: 846 EALRAK 829
EALR K
Sbjct: 1200 EALRGK 1217
Score = 208 bits (449), Expect(9) = 0.0
Identities = 83/104 (79%), Positives = 96/104 (92%)
Frame = -1 / +3
Query: 549 AAGDKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGK 370
+ +KPVVLMC+DPT SSLNPNLY+PTFAGFVDTDI+ GKISLRSLIDRSVVESFGAGG+
Sbjct: 1509 STNNKPVVLMCSDPTMSSLNPNLYKPTFAGFVDTDIAKGKISLRSLIDRSVVESFGAGGR 1688
Query: 369 TCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVM 238
TCILSRVYP+LA+GK+ARL+VFNNG+ +KVS LTAWEMKKP +
Sbjct: 1689 TCILSRVYPTLALGKNARLHVFNNGKVDIKVSELTAWEMKKPAL 1820
Score = 202 bits (435), Expect(9) = 0.0
Identities = 73/87 (83%), Positives = 78/87 (89%)
Frame = -1 / +3
Query: 1857 PLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVA 1678
P L TGYHF+P KNWINDPNAPMYYKGWYH FYQYNPKGAVWGNIVWAHSVSRDLINWVA
Sbjct: 201 PSLSTGYHFRPIKNWINDPNAPMYYKGWYHLFYQYNPKGAVWGNIVWAHSVSRDLINWVA 380
Query: 1677 LEPALRPSIPGDRYGCWSGSATVLPDG 1597
LE A++PSI D+YGCWSGSA +L DG
Sbjct: 381 LETAIQPSIKSDKYGCWSGSAXILRDG 461
Score = 177 bits (382), Expect(9) = 0.0
Identities = 80/98 (81%), Positives = 81/98 (82%)
Frame = +2 / -1
Query: 245 GFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRSIRLLR 424
GFFISHAV DTL LPLL T*RRA LP AS G*T ERMQVLPPAPKLSTTDRSIRLLR
Sbjct: 1813 GFFISHAVSSDTLMSTLPLLKT*RRAFLPSASVG*TRERMQVLPPAPKLSTTDRSIRLLR 1634
Query: 425 DILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGL 538
DILP MSVST PA VG YRFGFRDD+VGS HM TTGL
Sbjct: 1633 DILPLAMSVSTKPAKVGLYRFGFRDDMVGSEHMRTTGL 1520
Score = 169 bits (364), Expect(9) = 0.0
Identities = 71/88 (80%), Positives = 72/88 (81%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PS ADPDQ PYLS MLG A SSATQLMRSRDTECAHTMLPHTAPLGLYW* KWYH
Sbjct: 460 PSRRMXADPDQHPYLSDLMLGWIAVSSATQLMRSRDTECAHTMLPHTAPLGLYW*NKWYH 281
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGL 1861
PL*YMGALGSLIQF G KWYPVL G+
Sbjct: 280 PL*YMGALGSLIQFFMGRKWYPVLKLGV 197
Score = 149 bits (320), Expect(9) = 0.0
Identities = 70/98 (71%), Positives = 72/98 (73%)
Frame = +2 / -1
Query: 830 FALSASTSSIGHCSSCFPLGSSHTVLGIAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS 1009
F LSAS+SS GHC SC PLGSS T LGIAWIPA PLATSS A SDSLAQP RMRRRL GS
Sbjct: 1216 FPLSASSSSTGHCISCLPLGSSQTFLGIAWIPAHPLATSSTAASDSLAQPQRMRRRLTGS 1037
Query: 1010 *NVLDA*KLPXXXXXXXXXPAGSSGTYRSALGWYVPTV 1123
* VL+A*KLP PAG SGTYRS L VPTV
Sbjct: 1036 *KVLEA*KLP*S*RRWCSSPAGLSGTYRSVLRS*VPTV 923
Score = 134 bits (287), Expect(9) = 0.0
Identities = 50/67 (74%), Positives = 56/67 (83%)
Frame = -1 / +3
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPT 1417
G P IMYTG+D DINY+V+N+A+PKN SDPLLREWVKP NP+IVPEGGIN TQFRDPT
Sbjct: 459 GTPAIMYTGIDRADINYEVQNIAFPKNKSDPLLREWVKPRGNPIIVPEGGINATQFRDPT 638
Query: 1416 TAWRGPG 1396
TAW G
Sbjct: 639 TAWYADG 659
Score = 115 bits (246), Expect(6) = 1e-095
Identities = 51/71 (71%), Positives = 57/71 (80%)
Frame = -3 / +2
Query: 1840 VPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRMGQHRVGALGVARPHQLGGARAGAQ 1661
VPLPA +ELDQ SQRAHVLQGVVPF+LP+Q QG +GQHRVGALGVA PHQLGGA G
Sbjct: 218 VPLPAHKELDQRSQRAHVLQGVVPFVLPVQPQGCGVGQHRVGALGVA*PHQLGGAGDGNP 397
Query: 1660 TKHPGRQVRLL 1628
+H QVR+L
Sbjct: 398 AEHQVGQVRVL 430
Score = 114 bits (243), Expect(6) = 1e-095
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = -3 / +2
Query: 472 DICRICRHGHLERQDIPEKPDRPVGR*ELRSRGQDLHPLQGLPVAGHRQGRSPLRVQQRE 293
D+ R+C H H + QDI EKPDR V R ELR RGQDLHPL GLP A Q RSP R+QQR+
Sbjct: 1586 DLRRLC*H*HSQGQDISEKPDRSVRRGELRGRGQDLHPLPGLPDARAGQERSPSRLQQRQ 1765
Query: 292 GARQGVPSHRVGDEEAG 242
G QGV +H VGDEEAG
Sbjct: 1766 GGHQGVGAHGVGDEEAG 1816
Score = 110 bits (235), Expect(6) = 1e-075
Identities = 50/75 (66%), Positives = 58/75 (77%)
Frame = +1 / -3
Query: 244 RLLHLPRGETGHLDVRPPVVEHVEASVLADGQRRVDPGEDAGLAPGSEALNDRPVDQASQ 423
RLLHLPR E HLDV VVE V+ASVLA +RRVDPGEDAG AP EAL+D P+DQASQ
Sbjct: 1814 RLLHLPRRELRHLDVHLAVVEDVKASVLAQRERRVDPGEDAGPAPCPEALHDGPIDQASQ 1635
Query: 424 GYLAVRDVRVDKSCK 468
YLA+ V V+K+C+
Sbjct: 1634 RYLALGYVSVNKACE 1590
Score = 102 bits (218), Expect(6) = 1e-075
Identities = 47/79 (59%), Positives = 52/79 (65%)
Frame = +1 / -3
Query: 1606 QHRRRPGPAAVPVARDAWSERRL*RHPVDEVSRHRVRPHDVAPYGALGIXXXXXXXXXXX 1785
Q RRP PA V V DA + RL RHPVDEV+RHRVRPHDVAP+ LG+
Sbjct: 452 QDXRRPRPAPVLVRLDARLDCRLQRHPVDEVTRHRVRPHDVAPHRTLGVVLVEQMVPPLV 273
Query: 1786 XHGRVGIIDPVLGGLEVVP 1842
HGRVGI+DPVL G EVVP
Sbjct: 272 VHGRVGIVDPVLYGPEVVP 216
Score = 101 bits (215), Expect(9) = 0.0
Identities = 47/67 (70%), Positives = 47/67 (70%)
Frame = +2 / -1
Query: 1397 PGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW*LMSGWSTPV 1576
P AVVGSRN V LMPPSGTM GL GFTHSRSSGSD F G A F T *LMS S PV
Sbjct: 658 PSAYHAVVGSRNWVALMPPSGTMIGLPRGFTHSRSSGSDLFLGKAMFCTS*LMSARSMPV 479
Query: 1577 YMITGPP 1597
YMI G P
Sbjct: 478 YMIAGVP 458
Score = 100 bits (212), Expect(9) = 0.0
Identities = 41/70 (58%), Positives = 52/70 (74%)
Frame = -1 / +3
Query: 756 ADVEVSFEVSPAALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERT 577
+ +V A++ GAE LDPALA DA++LC ++ A V GGVGPFGLWVLAS+ +E+T
Sbjct: 1287 SQADVEVSFEVASIDGAEALDPALANDAQKLCSMRGAHVEGGVGPFGLWVLASSKLEEKT 1466
Query: 576 AVFFRVFKPA 547
AVFFRVFK A
Sbjct: 1467 AVFFRVFKAA 1496
Score = 96.4 bits (204), Expect(3) = 3e-039
Identities = 43/71 (60%), Positives = 45/71 (63%)
Frame = -2 / +1
Query: 1838 TTSSPPRTGSMIPTRPCTTRGGTISSTNTIPRAPYGATSCGRTRCXXXXXXXXXXXXXSD 1659
TTS P RTGS IPTRPCTTRGGTI ST+T PR GATSCGRTRC S
Sbjct: 220 TTSGP*RTGSTIPTRPCTTRGGTICSTSTTPRVRCGATSCGRTRCRVTSSTGWRWRRQSS 399
Query: 1658 QASRATGTAAG 1626
+AS T T AG
Sbjct: 400 RASSRTSTGAG 432
Score = 90.0 bits (190), Expect(5) = 1e-038
Identities = 40/64 (62%), Positives = 43/64 (67%)
Frame = +3 / -2
Query: 276 TP*RAPSRC*TRRGERPCRWPATGRPWRGCRSCPRLRSSQRPTGRSGFSGISCRSRCPCR 455
TP* P RC* R GER C A+GRP RGCRSCP RSS R T RSGFS ISC C C+
Sbjct: 1782 TP*CPPCRC*RREGERSCPARASGRPGRGCRSCPLPRSSPRRTDRSGFSEISCPWLCQCQ 1603
Query: 456 QILQ 467
Q L+
Sbjct: 1602 QSLR 1591
Score = 79.4 bits (167), Expect(3) = 3e-039
Identities = 45/70 (64%), Positives = 46/70 (65%)
Frame = -2 / +1
Query: 524 SCAPTLPSRP*TRTCTARHLQDLSTRTSRTARYP*EA*STGRSLRASEPGARPASSPGST 345
SCAP P *TRT T+R Q L T T ARY *EA*S G S RAS GA PASSPGST
Sbjct: 1534 SCAPIQPCHL*TRTYTSRPSQALLTLT*PRARYL*EA*SIGPSWRASGQGAGPASSPGST 1713
Query: 344 RRWPSARTLA 315
RR ARTLA
Sbjct: 1714 RRSRWARTLA 1743
Score = 72.1 bits (151), Expect(5) = 1e-038
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = +3 / -2
Query: 1719 TRCCPIRRPWDCIGRRNGTTPCSTWARWD 1805
TRCCP PW C GR NGTTPCSTWARWD
Sbjct: 339 TRCCPTPHPWGCTGRTNGTTPCSTWARWD 253
Score = 67.0 bits (140), Expect(9) = 0.0
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = -1 / +3
Query: 1356 SSPPRGVAYVYXXXXXXXXXXXXRPLHSAPTGMWECPDFYPVSKGGAPR 1210
S RGVAYVY +PLHSAPTGMWECPD YPV+ G R
Sbjct: 687 SGASRGVAYVYRSRDFMRWTRVRKPLHSAPTGMWECPDLYPVTADGRHR 833
Score = 64.8 bits (135), Expect(6) = 1e-095
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = -2 / +1
Query: 992 AASCGAGLTSPTPPPTMWLKAGLESRRFQGRCGWTPVGSSCCSG 861
AAS GAG TSPTPP T + G ESRRF+ R GWT VG S CSG
Sbjct: 1054 AASSGAGPTSPTPPSTTSPRDGPESRRFRERFGWTRVGGS*CSG 1185
Score = 61.1 bits (127), Expect(9) = 0.0
Identities = 25/50 (50%), Positives = 29/50 (58%)
Frame = +2 / -1
Query: 1220 PPLLTG*KSGHSHIPVGAECSGXXXXXXXXXXXXXYTYATPRGGDDPAAL 1369
P +TG +SGHSHIPVGAECSG YTYATPR + A +
Sbjct: 823 PSAVTGYRSGHSHIPVGAECSGFLTRVHRMKSRLRYTYATPRDAPESAPM 674
Score = 61.1 bits (127), Expect(6) = 1e-095
Identities = 23/35 (65%), Positives = 32/35 (91%)
Frame = -1 / +3
Query: 831 KSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEVS 727
+ V+++NRV+K G HVEVTG++T+QADVEVSFEV+
Sbjct: 1218 RPVSIKNRVVKRGEHVEVTGLRTSQADVEVSFEVA 1322
Score = 58.8 bits (122), Expect(6) = 1e-095
Identities = 27/55 (49%), Positives = 30/55 (54%)
Frame = -3 / +2
Query: 1582 HVHGRGPPGHQLPGPERGVPEERVGPAAPGVGEALAXXXXXXXXXXXRDAVPRPD 1418
HVHG P HQL G E +P+E+VGPAAP VGEA R VP PD
Sbjct: 473 HVHGHRPRRHQLRGAEHRLPQEQVGPAAPRVGEAAGQPDHRAGGRHQRHPVPGPD 637
Score = 58.3 bits (121), Expect(9) = 0.0
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +1 / -3
Query: 550 GLEHPEEHRGSLLAVGGGQHPQPERPHAAPHVRALHAAQ 666
GLEHPEE R LL +G G+HPQ E HAA HV HAAQ
Sbjct: 1493 GLEHPEEDRRLLLQLGRGEHPQAEGAHAAFHVGTPHAAQ 1377
Score = 56.1 bits (116), Expect(6) = 1e-075
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1 / -3
Query: 883 TGVQPHRPWNRLDSSPAFSHIVGGGVGLVSPAPQDAA 993
T VQP+ NRLDS P+ +V GGVGLV PAP+DAA
Sbjct: 1163 TRVQPNLSRNRLDSGPSLGDVVDGGVGLVGPAPEDAA 1053
Score = 52.4 bits (108), Expect(6) = 1e-075
Identities = 24/39 (61%), Positives = 24/39 (61%)
Frame = +2 / -1
Query: 548 AGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 664
A LNT K TAV S L EASTH P GPTPP T A H
Sbjct: 1495 AALNTRKKTAVFSSSLDEASTHRPKGPTPPSTWAPLMLH 1379
Score = 50.1 bits (103), Expect(9) = 0.0
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = +2 / -1
Query: 731 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSS 856
TSKLTSTSAC V PVTST P L TLFL +T +++SS
Sbjct: 1318 TSKLTSTSACEVRSPVTSTCSPRLTTLFLMLTGLFPLSASSS 1193
Score = 49.6 bits (102), Expect(6) = 1e-095
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -3 / +2
Query: 1180 PKGQARAQEQPRPPAVRLLHRGHVPPE 1100
P+G+ARAQEQPRP +RLLHR H+ P+
Sbjct: 866 PQGEARAQEQPRPAPLRLLHRRHLRPQ 946
Score = 46.4 bits (95), Expect(6) = 1e-075
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +1 / -3
Query: 730 HFEAHLHVSLCRLYPGHLDVMSCLDYPVPESDR 828
H +AHLHVSL PG LDV+S LD+PV ++DR
Sbjct: 1319 HLKAHLHVSL*GP*PGDLDVLSPLDHPVLDADR 1221
Score = 40.0 bits (81), Expect(9) = 0.0
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2 / -1
Query: 1151 LFLSTCLTLGPGGTDVSSP 1207
LFLSTC TLGP TDVSSP
Sbjct: 895 LFLSTCFTLGPDTTDVSSP 839
Score = 38.2 bits (77), Expect(9) = 0.0
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 812 TG*SRQDITSR*PGYKRHRLTWR*A 738
TG S + TSR PGY HRLTWR*A
Sbjct: 1237 TGWSSGESTSRSPGYGPHRLTWR*A 1311
Score = 38.2 bits (77), Expect(5) = 1e-038
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +3 / -2
Query: 735 RSSPPRQPVPFVSRSPRRDVLP*LPCS* 818
+SSPPRQPV V+R PRR + * PCS*
Sbjct: 1314 QSSPPRQPVRSVAR*PRRALPA*PPCS* 1231
Score = 35.4 bits (71), Expect(3) = 3e-039
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -3 / +2
Query: 922 NPGDSKDGVAGPQWE 878
NPGDS+ G+AGP+WE
Sbjct: 1124 NPGDSEKGLAGPEWE 1168
Score = 32.2 bits (64), Expect(9) = 0.0
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +2 / -2
Query: 1925 *TTCDAPASCNSSS 1966
*TTCDAPASC+SS+
Sbjct: 138 *TTCDAPASCSSST 97
Score = 28.1 bits (55), Expect(6) = 1e-075
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1 / -1
Query: 1891 RSSLGFEVLVVVDDMRRSCELQQQ 1962
R L + + +VDDMRR ELQQQ
Sbjct: 172 RRRLRLQEVGLVDDMRRPGELQQQ 101
Score = 26.3 bits (51), Expect(5) = 1e-038
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -2
Query: 972 PSPTGCGAAWPG 1007
PSP GCG A PG
Sbjct: 1074 PSPRGCGGA*PG 1039
Score = 26.3 bits (51), Expect(9) = 0.0
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -1 / +2
Query: 1935 HVVYNYKDLEAEAAAAT 1885
HVVY LE EAAAAT
Sbjct: 128 HVVYETDLLETEAAAAT 178
Score = 23.5 bits (45), Expect(5) = 1e-038
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1 / -1
Query: 1792 GRVGIIDPVLGGLEVVPRPEQGVDDGRRHLVRRRSSL 1902
G +G + G + P + GV++ RRH RRR L
Sbjct: 265 GALGSLIQFFMGRKWYPVLKLGVENRRRHSGRRRLRL 155
Score = 23.5 bits (45), Expect(9) = 0.0
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -1 / +3
Query: 1386 WRLLVGSAAGSS 1351
WRLL+G+ +G+S
Sbjct: 663 WRLLIGALSGAS 698
>gb|BQ764136.1|BQ764136 EBro03_SQ006_J10_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_J10 5', mRNA sequence
Length = 725
Score = 208 bits (448), Expect(4) = e-109
Identities = 80/110 (72%), Positives = 96/110 (87%)
Frame = -1 / +2
Query: 1056 RLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 877
RL+YDYGNFYASKTFYDPAK RR+L GWANESD+ A D AKGWAGI AIPR +WLDPSGK
Sbjct: 104 RLQYDYGNFYASKTFYDPAKNRRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGK 283
Query: 876 QLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEVS 727
QLLQWP+EE+E LR K+V++ ++V+K G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 284 QLLQWPVEELEQLRGKAVSVGDKVVKPGQHFEVTGLQSYQSDVEVSFEVA 433
Score = 142 bits (304), Expect(4) = 2e-061
Identities = 69/103 (66%), Positives = 73/103 (70%)
Frame = +2 / -3
Query: 731 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLG 910
TSKLTSTS C PVTS P L TL +T LS S+SS GHCSSC PLGSSH LG
Sbjct: 429 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 250
Query: 911 IAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
IAW+PA PLA S A +SDSLAQP RR LAGS* VLDA*KLP
Sbjct: 249 IAWMPAHPLALSWATLSDSLAQPSSTRRFLAGS*KVLDA*KLP 121
Score = 98.7 bits (209), Expect(4) = e-109
Identities = 42/75 (56%), Positives = 52/75 (69%)
Frame = -1 / +2
Query: 747 EVSFEVSPAALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVF 568
+V A+L AE DPA A DA++LCG+K AD + GVGPFGLWVLASA+ E+TAVF
Sbjct: 407 DVEVSFEVASLDKAEPFDPAYANDAQKLCGMKNADAKAGVGPFGLWVLASADLAEKTAVF 586
Query: 567 FRVFKPAAGDKPVVL 523
FRVFK G V++
Sbjct: 587 FRVFKDGYGKPLVLM 631
Score = 80.8 bits (170), Expect(4) = e-109
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = -1 / +2
Query: 537 KPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKI 427
KP+VLMC+DPTKSSL P LY+PTFAGFVDTDIS+GKI
Sbjct: 614 KPLVLMCSDPTKSSLTPGLYKPTFAGFVDTDISSGKI 724
Score = 67.5 bits (141), Expect(4) = 2e-061
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = +2 / -3
Query: 428 ILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGL 538
I P EMSVSTNPANVG YR G RDDLVGS+HM T GL
Sbjct: 723 IFPDEMSVSTNPANVGLYRPGVRDDLVGSLHMRTRGL 613
Score = 67.5 bits (141), Expect(4) = e-109
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = -1 / +2
Query: 1155 NSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHR 1054
NSLDL RYDYYTVGTY+ R ERYVPD+P GD ++
Sbjct: 2 NSLDLTRYDYYTVGTYNNRTERYVPDNPTGDVYQ 103
Score = 56.5 bits (117), Expect(4) = 2e-061
Identities = 25/41 (60%), Positives = 25/41 (60%)
Frame = +2 / -3
Query: 542 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 664
P L TLK TAV S R AEA T P GPTP L SA F PH
Sbjct: 612 PYPSLKTLKKTAVFSARSAEARTQRPKGPTPALASAFFIPH 490
Score = 28.6 bits (56), Expect(4) = 2e-061
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2 / -3
Query: 1067 PAGSSGTYRSALGWYVPTV 1123
P G SGTYRS L VPTV
Sbjct: 90 PVGLSGTYRSVLLL*VPTV 34
>gb|BF264866.2|BF264866 HV_CEa0010J14f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0010J14f, mRNA sequence
Length = 835
Score = 232 bits (502), Expect(3) = e-103
Identities = 84/102 (82%), Positives = 93/102 (91%)
Frame = -1 / +2
Query: 1902 EAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNI 1723
EA AAT VP SI++PLLRTGYHFQPP NWINDPN P+YYKGWYH FYQYNPKGAVWGNI
Sbjct: 26 EAEAATPSVPASILSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNPKGAVWGNI 205
Query: 1722 VWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
+WAHSVSRDLINW+ALEPA++PSIP D+YG WSGSAT+LPDG
Sbjct: 206 IWAHSVSRDLINWMALEPAIKPSIPTDQYGVWSGSATILPDG 331
Score = 175 bits (377), Expect(3) = 4e-069
Identities = 72/94 (76%), Positives = 75/94 (79%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PSG VA+PDQ PY S GM GL AGSSA QLMRSRDTECA MLPHTAPLGLYW* KWYH
Sbjct: 330 PSGRMVAEPDQTPYWSVGMEGLMAGSSAIQLMRSRDTECAQMMLPHTAPLGLYW*NKWYH 151
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 1879
PL* G GSLIQF+GGWKW PV SRGL M+ GT
Sbjct: 150 PL**SGPFGSLIQFMGGWKW*PVRSRGLRMEAGT 49
Score = 136 bits (291), Expect(2) = 2e-041
Identities = 58/95 (61%), Positives = 67/95 (70%)
Frame = -3 / +1
Query: 1912 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 1733
P RG GD A +H QPPA DG+PLP P ELDQ S+ A +LQG+VP +LP+Q QGR +
Sbjct: 16 PEPRGRGGDAVRAGLHSQPPAPDGLPLPTPHELDQRSKWAALLQGMVPLVLPVQPQGRGV 195
Query: 1732 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
GQH +GALGV RPHQL GA AG Q HP R VR L
Sbjct: 196 GQHHLGALGVPRPHQLDGAGAGHQALHPHRPVRRL 300
Score = 122 bits (262), Expect(3) = e-103
Identities = 42/63 (66%), Positives = 53/63 (84%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPT 1417
G P ++YTG+D P NYQ++N+A+PK+ SDPLLREWVKP +NP+ VPE G+N TQFRDPT
Sbjct: 329 GTPAMLYTGIDRPGTNYQIQNIAFPKDPSDPLLREWVKPGYNPIAVPEAGMNATQFRDPT 508
Query: 1416 TAW 1408
TAW
Sbjct: 509 TAW 517
Score = 81.3 bits (171), Expect(3) = 4e-069
Identities = 42/80 (52%), Positives = 45/80 (56%)
Frame = +2 / -2
Query: 1358 PAALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATF 1537
P P +S S QAVVGSRN V MP SGT GL G THSRSSGS+ G A F
Sbjct: 567 PGLSPPTSIRHSPSPACQAVVGSRNWVAFMPASGTAMGLYPGLTHSRSSGSEGSLGKAMF 388
Query: 1538 RTW*LMSGWSTPVYMITGPP 1597
W*L+ G S PV I G P
Sbjct: 387 WIW*LVPGRSIPV*SIAGVP 328
Score = 62.5 bits (130), Expect(3) = e-103
Identities = 26/59 (44%), Positives = 32/59 (54%)
Frame = -1 / +2
Query: 1344 RGVAYVYXXXXXXXXXXXXRPLHSAPTGMWECPDFYPVSKGGAPRAGLETSVPPGPRVK 1168
RG+A +Y PLHSA TGMWECPDF+PV + G PR V P +V+
Sbjct: 575 RGMAILYRSRDFKHWVRAKHPLHSALTGMWECPDFFPVREPGHPRRA*RLQVRPALQVR 751
Score = 54.7 bits (113), Expect(2) = 2e-041
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -3 / +1
Query: 1579 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 1481
+H PPGHQLP PE +P+ +GPAAPGVG+A
Sbjct: 346 LHRDRPPGHQLPDPEHRLPQGPLGPAAPGVGQA 444
Score = 45.5 bits (93), Expect(3) = 4e-069
Identities = 24/58 (41%), Positives = 25/58 (43%)
Frame = +2 / -2
Query: 1172 TLGPGGTDVSSPARGAPPLLTG*KSGHSHIPVGAECSGXXXXXXXXXXXXXYTYATPR 1345
T G T RG P TG KSGHSH+PV AE SG Y A PR
Sbjct: 747 TCSAGRTWRRQARRGCPGSRTGKKSGHSHMPVSAEWSGCLARTQCLKSRLRYRMAMPR 574
>gb|CK122199.1|CK122199 BES1824102c17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C172 5-PRIME, mRNA sequence
Length = 718
Score = 280 bits (606), Expect(3) = e-100
Identities = 108/126 (85%), Positives = 115/126 (91%)
Frame = -1 / +2
Query: 1206 GLETSVPPGPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFY 1027
GL+TSV GPRVKHVLKNSLDLRRYDYYTVGTY + ERYVPD+PAGDEH LRYDYGNFY
Sbjct: 146 GLDTSVVSGPRVKHVLKNSLDLRRYDYYTVGTYDRKTERYVPDNPAGDEHHLRYDYGNFY 325
Query: 1026 ASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEV 847
ASKTFYDP KRRRILWGWANESD A DDVAKGWAGIQAIPR VWLDPSG+QL+QWP+EE+
Sbjct: 326 ASKTFYDPVKRRRILWGWANESDAAVDDVAKGWAGIQAIPRKVWLDPSGRQLMQWPVEEL 505
Query: 846 EALRAK 829
EALR K
Sbjct: 506 EALRGK 523
Score = 149 bits (320), Expect(4) = 1e-062
Identities = 70/98 (71%), Positives = 72/98 (73%)
Frame = +2 / -2
Query: 830 FALSASTSSIGHCSSCFPLGSSHTVLGIAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS 1009
F LSAS+SS GHC SC PLGSS T LGIAWIPA PLATSS A SDSLAQP RMRRRL GS
Sbjct: 522 FPLSASSSSTGHCISCLPLGSSQTFLGIAWIPAHPLATSSTAASDSLAQPQRMRRRLTGS 343
Query: 1010 *NVLDA*KLPXXXXXXXXXPAGSSGTYRSALGWYVPTV 1123
* VL+A*KLP PAG SGTYRS L VPTV
Sbjct: 342 *KVLEA*KLP*S*RRWCSSPAGLSGTYRSVLRS*VPTV 229
Score = 66.1 bits (138), Expect(3) = e-100
Identities = 26/45 (57%), Positives = 28/45 (62%)
Frame = -1 / +2
Query: 1344 RGVAYVYXXXXXXXXXXXXRPLHSAPTGMWECPDFYPVSKGGAPR 1210
RGVAYVY +PLHSAPTGMWECPD YPV+ G R
Sbjct: 5 RGVAYVYRSRDFMRWTRVRKPLHSAPTGMWECPDLYPVTADGRHR 139
Score = 64.8 bits (135), Expect(4) = 2e-032
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = -2 / +3
Query: 992 AASCGAGLTSPTPPPTMWLKAGLESRRFQGRCGWTPVGSSCCSG 861
AAS GAG TSPTPP T + G ESRRF+ R GWT VG S CSG
Sbjct: 360 AASSGAGPTSPTPPSTTSPRDGPESRRFRERFGWTRVGGS*CSG 491
Score = 61.1 bits (127), Expect(3) = e-100
Identities = 23/35 (65%), Positives = 32/35 (91%)
Frame = -1 / +2
Query: 831 KSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEVS 727
+ V+++NRV+K G HVEVTG++T+QADVEVSFEV+
Sbjct: 524 RPVSIKNRVVKRGEHVEVTGLRTSQADVEVSFEVA 628
Score = 59.3 bits (123), Expect(4) = 1e-062
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = +2 / -2
Query: 1220 PPLLTG*KSGHSHIPVGAECSGXXXXXXXXXXXXXYTYATPR 1345
P +TG +SGHSHIPVGAECSG YTYATPR
Sbjct: 129 PSAVTGYRSGHSHIPVGAECSGFLTRVHRMKSRLRYTYATPR 4
Score = 50.1 bits (103), Expect(4) = 1e-062
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = +2 / -2
Query: 731 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSS 856
TSKLTSTSAC V PVTST P L TLFL +T +++SS
Sbjct: 624 TSKLTSTSACEVRSPVTSTCSPRLTTLFLMLTGLFPLSASSS 499
Score = 49.6 bits (102), Expect(4) = 2e-032
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -3 / +1
Query: 1180 PKGQARAQEQPRPPAVRLLHRGHVPPE 1100
P+G+ARAQEQPRP +RLLHR H+ P+
Sbjct: 172 PQGEARAQEQPRPAPLRLLHRRHLRPQ 252
Score = 43.7 bits (89), Expect(4) = 2e-032
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = -1 / +2
Query: 756 ADVEVSFEVSPAALAGAETLDPALAYDAERLCGVKRADVRGG 631
+ +V A++ GAE LDPALA DA++LC ++ A V G
Sbjct: 593 SQADVEVSFEVASIDGAEALDPALANDAQKLCSMRGAHVERG 718
Score = 40.0 bits (81), Expect(4) = 1e-062
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2 / -2
Query: 1151 LFLSTCLTLGPGGTDVSSP 1207
LFLSTC TLGP TDVSSP
Sbjct: 201 LFLSTCFTLGPDTTDVSSP 145
Score = 38.2 bits (77), Expect(4) = 2e-032
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -2 / +3
Query: 812 TG*SRQDITSR*PGYKRHRLTWR*A 738
TG S + TSR PGY HRLTWR*A
Sbjct: 543 TGWSSGESTSRSPGYGPHRLTWR*A 617
>emb|AJ567377.2|HVU567377 Hordeum vulgare partial mRNA for
sucrose-sucrose-1-fructosyltransferase (1-sst gene)
Length = 2157
Score = 90.0 bits (190), Expect(9) = 8e-098
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = -1 / +1
Query: 1053 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 889
LRYD G +YASK+FYDP K+RR++W E+D+ D+ KGWA +Q+IPRTV LD
Sbjct: 1078 LRYDRGKYYASKSFYDPVKKRRVVWACVGETDSERADITKGWANLQSIPRTVELD 1242
Score = 89.5 bits (189), Expect(9) = 8e-098
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = -1 / +1
Query: 1848 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVW 1732
RTG+HFQP K + NDPN P+YY GWYHFFYQYNP G+VW
Sbjct: 292 RTGFHFQPDKYYQNDPNGPVYYGGWYHFFYQYNPSGSVW 408
Score = 79.0 bits (166), Expect(9) = 8e-098
Identities = 32/60 (53%), Positives = 38/60 (63%)
Frame = -1 / +1
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGPGPEQWRLLVGS 1366
QV +A P + SDPLLREWVK NPV+ P GI + FRDPTTAW WR ++GS
Sbjct: 589 QVTCLAEPADPSDPLLREWVKHPANPVVFPPPGIGMKDFRDPTTAWFDASDGTWRTIIGS 768
Score = 72.1 bits (151), Expect(5) = 3e-035
Identities = 27/38 (71%), Positives = 28/38 (73%)
Frame = +2 / -2
Query: 1733 HTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKWYPV 1846
HT P GLYW*KKWYHP *Y G LGS +L GWKW PV
Sbjct: 407 HTDPDGLYW*KKWYHPP*YTGPLGSFW*YLSGWKWKPV 294
Score = 56.5 bits (117), Expect(9) = 8e-098
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = -1 / +1
Query: 1725 IVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
IVW H+VS+DLI+W L PAL P D G +GS TVLPDG
Sbjct: 418 IVWGHAVSKDLIHWRHLPPALVPDQWYDIKGVLTGSITVLPDG 546
Score = 50.6 bits (104), Expect(5) = 3e-035
Identities = 29/64 (45%), Positives = 32/64 (50%)
Frame = +2 / -2
Query: 890 SSHTVLGIAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLPXXXXXXXXXP 1069
SS TVLGI W AQPL S+ + S S H RR GS*N LDA* P
Sbjct: 1241 SSSTVLGIDWRLAQPLVMSARSESVSPTHAHTTRRFFTGS*NDLDA*YFPRSYRSPTPSS 1062
Query: 1070 AGSS 1081
+ SS
Sbjct: 1061 SSSS 1050
Score = 50.1 bits (103), Expect(9) = 8e-098
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -1 / +1
Query: 873 LLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEVSPAALAGAETLD 694
L+QWP+EE++ LR + L + AG V + QTAQ D E +F + +A+ D
Sbjct: 1261 LIQWPVEELDTLRINTTDLSGITVGAGSVVPLHLHQTAQLDTEATFHIDASAIEAVNEAD 1440
Score = 49.6 bits (102), Expect(5) = 3e-035
Identities = 26/59 (44%), Positives = 26/59 (44%)
Frame = +2 / -2
Query: 1370 PTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW 1546
P RH AVVGSR MP G TG FTHSR SGS G A TW
Sbjct: 764 PMMVRHVPSLASNHAVVGSRKSFIPMPGGGNTTGFAGCFTHSRRSGSLGSAGSARHVTW 588
Score = 48.7 bits (100), Expect(9) = 8e-098
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = -1 / +1
Query: 426 SLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNN 298
S+R L+D S V+SF GG+ SR YP+ AI A +Y+FNN
Sbjct: 1687 SVRVLVDHSSVQSFAMGGRLTTTSRAYPTEAIYAAAGVYLFNN 1815
Score = 39.6 bits (80), Expect(5) = 3e-035
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTM 1726
PSGSTV +P P +S G AG Q +RS DT HT+
Sbjct: 545 PSGSTVMEPVSTPLMSYHWSGTKAGGRWRQWIRSLDTAWPHTI 417
Score = 37.3 bits (75), Expect(9) = 8e-098
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -1 / +1
Query: 648 ADVRGGVGPFGLWVLASANRKERTAVFFRVFKPAAG 541
A RG +GPFGL VLA+ E+T V+F + K G
Sbjct: 1471 AATRGALGPFGLLVLANRALTEQTGVYFYLSKGLDG 1578
Score = 33.1 bits (66), Expect(9) = 8e-098
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1 / +1
Query: 1173 VKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDD 1075
V +VLK S D R+D+Y++G + A ++ P D
Sbjct: 955 VLYVLKESSDDDRHDWYSLGRFDAAANKWTPID 1053
Score = 26.7 bits (52), Expect(5) = 3e-035
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3 / -3
Query: 300 C*TRRGERPCRWPATGRP 353
C*T R P RWP +G P
Sbjct: 1813 C*TGRPPPPHRWPRSGTP 1760
Score = 22.1 bits (42), Expect(9) = 8e-098
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1 / +1
Query: 1266 TGMWECPDFYPVSKG 1222
TG +EC D Y V G
Sbjct: 871 TGEYECIDLYAVGGG 915
>gb|BI778225.2|BI778225 EBro07_SQ002_J10_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ002_J10 5', mRNA sequence
Length = 695
Score = 232 bits (502), Expect(3) = 4e-095
Identities = 84/102 (82%), Positives = 93/102 (91%)
Frame = -1 / +1
Query: 1902 EAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNI 1723
EA AAT VP SI++PLLRTGYHFQPP NWINDPN P+YYKGWYH FYQYNPKGAVWGNI
Sbjct: 52 EAEAATPSVPASILSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNPKGAVWGNI 231
Query: 1722 VWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
+WAHSVSRDLINW+ALEPA++PSIP D+YG WSGSAT+LPDG
Sbjct: 232 IWAHSVSRDLINWMALEPAIKPSIPTDQYGVWSGSATILPDG 357
Score = 175 bits (377), Expect(3) = 4e-065
Identities = 72/94 (76%), Positives = 75/94 (79%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PSG VA+PDQ PY S GM GL AGSSA QLMRSRDTECA MLPHTAPLGLYW* KWYH
Sbjct: 356 PSGRMVAEPDQTPYWSVGMEGLMAGSSAIQLMRSRDTECAQMMLPHTAPLGLYW*NKWYH 177
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 1879
PL* G GSLIQF+GGWKW PV SRGL M+ GT
Sbjct: 176 PL**SGPFGSLIQFMGGWKW*PVRSRGLRMEAGT 75
Score = 136 bits (291), Expect(2) = 2e-041
Identities = 58/95 (61%), Positives = 67/95 (70%)
Frame = -3 / +3
Query: 1912 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 1733
P RG GD A +H QPPA DG+PLP P ELDQ S+ A +LQG+VP +LP+Q QGR +
Sbjct: 42 PEPRGRGGDAVRAGLHSQPPAPDGLPLPTPHELDQRSKWAALLQGMVPLVLPVQPQGRGV 221
Query: 1732 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
GQH +GALGV RPHQL GA AG Q HP R VR L
Sbjct: 222 GQHHLGALGVPRPHQLDGAGAGHQALHPHRPVRRL 326
Score = 122 bits (262), Expect(3) = 4e-095
Identities = 42/63 (66%), Positives = 53/63 (84%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPT 1417
G P ++YTG+D P NYQ++N+A+PK+ SDPLLREWVKP +NP+ VPE G+N TQFRDPT
Sbjct: 355 GTPAMLYTGIDRPGTNYQIQNIAFPKDPSDPLLREWVKPGYNPIAVPEAGMNATQFRDPT 534
Query: 1416 TAW 1408
TAW
Sbjct: 535 TAW 543
Score = 79.4 bits (167), Expect(3) = 4e-065
Identities = 38/63 (60%), Positives = 40/63 (63%)
Frame = +2 / -1
Query: 1409 QAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMIT 1588
QAVVGSRN V MP SGT GL G THSRSSGS+ G A F W*L+ G S PV I
Sbjct: 542 QAVVGSRNWVAFMPASGTAMGLYPGLTHSRSSGSEGSLGKAMFWIW*LVPGRSIPV*SIA 363
Query: 1589 GPP 1597
G P
Sbjct: 362 GVP 354
Score = 54.7 bits (113), Expect(2) = 2e-041
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -3 / +3
Query: 1579 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 1481
+H PPGHQLP PE +P+ +GPAAPGVG+A
Sbjct: 372 LHRDRPPGHQLPDPEHRLPQGPLGPAAPGVGQA 470
Score = 34.1 bits (68), Expect(3) = 4e-065
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2 / -1
Query: 1250 HSHIPVGAECSGXXXXXXXXXXXXXYTYATPR 1345
HSH+PV AECSG Y A PR
Sbjct: 695 HSHMPVSAECSGCLARTQCLKSRLRYRMAMPR 600
Score = 33.6 bits (67), Expect(3) = 4e-095
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1 / +1
Query: 1344 RGVAYVYXXXXXXXXXXXXRPLHSAPTGMWE 1252
RG+A +Y PLHSA TGMWE
Sbjct: 601 RGMAILYRSRDFKHWVRAKHPLHSALTGMWE 693
>gb|BF625535.2|BF625535 HVSMEa0011C02f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0011C02f, mRNA sequence
Length = 641
Score = 232 bits (502), Expect(2) = 3e-090
Identities = 84/102 (82%), Positives = 93/102 (91%)
Frame = -1 / +3
Query: 1902 EAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNI 1723
EA AAT VP SI++PLLRTGYHFQPP NWINDPN P+YYKGWYH FYQYNPKGAVWGNI
Sbjct: 114 EAEAATPSVPASILSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNPKGAVWGNI 293
Query: 1722 VWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
+WAHSVSRDLINW+ALEPA++PSIP D+YG WSGSAT+LPDG
Sbjct: 294 IWAHSVSRDLINWMALEPAIKPSIPTDQYGVWSGSATILPDG 419
Score = 175 bits (377), Expect(2) = 5e-060
Identities = 72/94 (76%), Positives = 75/94 (79%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PSG VA+PDQ PY S GM GL AGSSA QLMRSRDTECA MLPHTAPLGLYW* KWYH
Sbjct: 418 PSGRMVAEPDQTPYWSVGMEGLMAGSSAIQLMRSRDTECAQMMLPHTAPLGLYW*NKWYH 239
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 1879
PL* G GSLIQF+GGWKW PV SRGL M+ GT
Sbjct: 238 PL**SGPFGSLIQFMGGWKW*PVRSRGLRMEAGT 137
Score = 136 bits (291), Expect(2) = 2e-041
Identities = 58/95 (61%), Positives = 67/95 (70%)
Frame = -3 / +2
Query: 1912 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 1733
P RG GD A +H QPPA DG+PLP P ELDQ S+ A +LQG+VP +LP+Q QGR +
Sbjct: 104 PEPRGRGGDAVRAGLHSQPPAPDGLPLPTPHELDQRSKWAALLQGMVPLVLPVQPQGRGV 283
Query: 1732 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
GQH +GALGV RPHQL GA AG Q HP R VR L
Sbjct: 284 GQHHLGALGVPRPHQLDGAGAGHQALHPHRPVRRL 388
Score = 121 bits (258), Expect(2) = 3e-090
Identities = 41/63 (65%), Positives = 52/63 (82%)
Frame = -1 / +3
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPT 1417
G P ++YTG+D P NYQ++N+A+PK+ SDPLLREWVKP +NP+ VPE G+N TQFRDPT
Sbjct: 417 GTPAMLYTGIDRPGTNYQIQNIAFPKDPSDPLLREWVKPGYNPIAVPEAGMNATQFRDPT 596
Query: 1416 TAW 1408
T W
Sbjct: 597 TVW 605
Score = 77.6 bits (163), Expect(2) = 5e-060
Identities = 37/63 (58%), Positives = 39/63 (61%)
Frame = +2 / -2
Query: 1409 QAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMIT 1588
Q VVGSRN V MP SGT GL G THSRSSGS+ G A F W*L+ G S PV I
Sbjct: 604 QTVVGSRNWVAFMPASGTAMGLYPGLTHSRSSGSEGSLGKAMFWIW*LVPGRSIPV*SIA 425
Query: 1589 GPP 1597
G P
Sbjct: 424 GVP 416
Score = 54.7 bits (113), Expect(2) = 2e-041
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -3 / +2
Query: 1579 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 1481
+H PPGHQLP PE +P+ +GPAAPGVG+A
Sbjct: 434 LHRDRPPGHQLPDPEHRLPQGPLGPAAPGVGQA 532
>gb|BF255160.2|BF255160 HVSMEf0006B22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0006B22f, mRNA sequence
Length = 604
Score = 151 bits (325), Expect(3) = 2e-089
Identities = 58/84 (69%), Positives = 72/84 (85%)
Frame = -1 / +1
Query: 978 GWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLRNRVIK 799
GWANESD+ A D AKGWAGI AIPR +WLDPSGKQLLQWP+EE+E LR K+V++ ++V+K
Sbjct: 4 GWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGKQLLQWPVEELEQLRGKAVSVGDKVVK 183
Query: 798 AGHHVEVTGIQTAQADVEVSFEVS 727
G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 184 PGQHFEVTGLQSYQSDVEVSFEVA 255
Score = 116 bits (249), Expect(3) = 2e-089
Identities = 48/56 (85%), Positives = 52/56 (92%)
Frame = -1 / +1
Query: 537 KPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGK 370
KP+VLMC+DPTKSSL P LY+PTFAGFVDTDIS+GKISLR LIDRSVVESF AGGK
Sbjct: 436 KPLVLMCSDPTKSSLTPGLYKPTFAGFVDTDISSGKISLRKLIDRSVVESFXAGGK 603
Score = 115 bits (246), Expect(3) = 7e-060
Identities = 54/83 (65%), Positives = 58/83 (69%)
Frame = +2 / -3
Query: 731 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLG 910
TSKLTSTS C PVTS P L TL +T LS S+SS GHCSSC PLGSSH LG
Sbjct: 251 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 72
Query: 911 IAWIPAQPLATSSAAVSDSLAQP 979
IAW+PA PLA S A +SDSLAQP
Sbjct: 71 IAWMPAHPLALSWATLSDSLAQP 3
Score = 101 bits (215), Expect(3) = 2e-089
Identities = 43/75 (57%), Positives = 53/75 (70%)
Frame = -1 / +1
Query: 747 EVSFEVSPAALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVF 568
+V A+L AE DPA A DA++LCG+K AD +GGVGPFGLWVLASA+ E+TAVF
Sbjct: 229 DVEVSFEVASLDKAEPFDPAYANDAQKLCGMKNADAKGGVGPFGLWVLASADLAEKTAVF 408
Query: 567 FRVFKPAAGDKPVVL 523
FRVFK G V++
Sbjct: 409 FRVFKDGYGKPLVLM 453
Score = 95.5 bits (202), Expect(3) = 7e-060
Identities = 41/55 (74%), Positives = 45/55 (81%)
Frame = +2 / -3
Query: 374 PPAPKLSTTDRSIRLLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGL 538
PPA KLSTT+RSI L++I P EMSVSTNPANVG YR G RDDLVGS+HM T GL
Sbjct: 599 PPAXKLSTTERSISFLKEIFPDEMSVSTNPANVGLYRPGVRDDLVGSLHMRTRGL 435
Score = 60.2 bits (125), Expect(3) = 7e-060
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = +2 / -3
Query: 542 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 664
P L TLK TAV S R AEA T P GPTPPL SA F PH
Sbjct: 434 PYPSLKTLKKTAVFSARSAEARTQRPKGPTPPLASAFFIPH 312
>gb|BE214358.2|BE214358 HV_CEb0003D11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003D11f, mRNA sequence
Length = 701
Score = 232 bits (502), Expect(2) = 7e-088
Identities = 84/102 (82%), Positives = 93/102 (91%)
Frame = -1 / +1
Query: 1902 EAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNI 1723
EA AAT VP SI++PLLRTGYHFQPP NWINDPN P+YYKGWYH FYQYNPKGAVWGNI
Sbjct: 154 EAEAATPSVPASILSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNPKGAVWGNI 333
Query: 1722 VWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
+WAHSVSRDLINW+ALEPA++PSIP D+YG WSGSAT+LPDG
Sbjct: 334 IWAHSVSRDLINWMALEPAIKPSIPTDQYGVWSGSATILPDG 459
Score = 175 bits (377), Expect(3) = 2e-060
Identities = 72/94 (76%), Positives = 75/94 (79%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PSG VA+PDQ PY S GM GL AGSSA QLMRSRDTECA MLPHTAPLGLYW* KWYH
Sbjct: 458 PSGRMVAEPDQTPYWSVGMEGLMAGSSAIQLMRSRDTECAQMMLPHTAPLGLYW*NKWYH 279
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 1879
PL* G GSLIQF+GGWKW PV SRGL M+ GT
Sbjct: 278 PL**SGPFGSLIQFMGGWKW*PVRSRGLRMEAGT 177
Score = 136 bits (291), Expect(2) = 2e-041
Identities = 58/95 (61%), Positives = 67/95 (70%)
Frame = -3 / +3
Query: 1912 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 1733
P RG GD A +H QPPA DG+PLP P ELDQ S+ A +LQG+VP +LP+Q QGR +
Sbjct: 144 PEPRGRGGDAVRAGLHSQPPAPDGLPLPTPHELDQRSKWAALLQGMVPLVLPVQPQGRGV 323
Query: 1732 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
GQH +GALGV RPHQL GA AG Q HP R VR L
Sbjct: 324 GQHHLGALGVPRPHQLDGAGAGHQALHPHRPVRRL 428
Score = 113 bits (241), Expect(2) = 7e-088
Identities = 39/62 (62%), Positives = 51/62 (82%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHPDINYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPT 1417
G P ++YTG+D P NYQ++N+A+PK+ SDPLLREWVKP +NP+ VPE G+N QFR+PT
Sbjct: 457 GTPAMLYTGIDRPGTNYQIQNIAFPKDPSDPLLREWVKPGYNPIAVPEAGMNAPQFREPT 636
Query: 1416 TA 1411
TA
Sbjct: 637 TA 642
Score = 74.4 bits (156), Expect(3) = 2e-060
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +2 / -1
Query: 1409 QAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW*LMSGWSTPVYMIT 1588
+AVVGSRN MP SGT GL G THSRSSGS+ G A F W*L+ G S PV I
Sbjct: 644 RAVVGSRNWGAFMPASGTAMGLYPGLTHSRSSGSEGSLGKAMFWIW*LVPGRSIPV*SIA 465
Query: 1589 GPP 1597
G P
Sbjct: 464 GVP 456
Score = 54.7 bits (113), Expect(2) = 2e-041
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -3 / +3
Query: 1579 VHGRGPPGHQLPGPERGVPEERVGPAAPGVGEA 1481
+H PPGHQLP PE +P+ +GPAAPGVG+A
Sbjct: 474 LHRDRPPGHQLPDPEHRLPQGPLGPAAPGVGQA 572
Score = 23.5 bits (45), Expect(3) = 2e-060
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / -1
Query: 1928 TTCDAPASCNSSS 1966
T+ DAPASC SS
Sbjct: 140 TSWDAPASCRRSS 102
>emb|X83233.1|HVSF6FT Hordeum vulgare mRNA for sucrose:fructan 6-fructosyltransferase
Length = 2091
Score = 91.3 bits (193), Expect(9) = 7e-085
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = -1 / +1
Query: 1053 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 889
LRYD+G FYAS +FYDPAK RR+L G+ E D+ DV KGWA IQ++PRTV LD
Sbjct: 1063 LRYDWGKFYASTSFYDPAKNRRVLMGYVGEVDSKRADVVKGWASIQSVPRTVALD 1227
Score = 80.8 bits (170), Expect(9) = 7e-085
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -1 / +1
Query: 1848 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVW 1732
R+GYHFQ KN+++DPN MYY+GWYH FYQYNP G W
Sbjct: 289 RSGYHFQTAKNYMSDPNGLMYYRGWYHMFYQYNPVGTDW 405
Score = 69.8 bits (146), Expect(9) = 7e-085
Identities = 28/60 (46%), Positives = 35/60 (58%)
Frame = -1 / +1
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGPGPEQWRLLVGS 1366
+V+ +A P + +DPLLR W K NPVI G+ FRDP TAW E WR L+GS
Sbjct: 589 EVQCIATPADPNDPLLRRWTKHPANPVIWSPPGVGTKDFRDPMTAWYDESDETWRTLLGS 768
Score = 60.2 bits (125), Expect(5) = 1e-022
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +2 / -2
Query: 1736 TAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKWYPV 1846
+ P GLYW* WYHP *Y+ LGSL+ FL WKW P+
Sbjct: 401 SVPTGLYW*NMWYHPR*YIRPLGSLM*FLAVWKW*PL 291
Score = 49.6 bits (102), Expect(9) = 7e-085
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = -1 / +1
Query: 873 LLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEVSPAALAGAETLD 694
LL WP+EE+E LR + L + I G + + Q Q D+E SF + +A+A D
Sbjct: 1246 LLLWPVEEIETLRLNATELTDVTINTGSVIHIPLRQGTQLDIEASFHLDASAVAALNEAD 1425
Score = 46.0 bits (94), Expect(9) = 7e-085
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -1 / +1
Query: 1167 HVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 1063
HVLK S+D R+DYY++GTY A + P DP D
Sbjct: 946 HVLKASMDDERHDYYSLGTYDSAANTWTPIDPELD 1050
Score = 42.3 bits (86), Expect(9) = 7e-085
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -1 / +1
Query: 429 ISLRSLIDRSVVESFGAGGKTCILSRVYP 343
+S+R L+D S+V+ F GG+T + SRVYP
Sbjct: 1672 LSMRVLVDHSIVQGFDMGGRTTMTSRVYP 1758
Score = 42.3 bits (86), Expect(9) = 7e-085
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -1 / +1
Query: 1719 WAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
W H+VSR+L+ W L A+ D G SGS TVLP+G
Sbjct: 421 WGHAVSRNLVQWRTLPIAMVADQWYDILGVLSGSMTVLPNG 543
Score = 40.9 bits (83), Expect(5) = 1e-022
Identities = 24/50 (48%), Positives = 27/50 (54%)
Frame = +2 / -2
Query: 890 SSHTVLGIAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
S TVLG + A PL TS+ S S P RR LAGS* +DA* P
Sbjct: 1226 SRATVLGTD*MEAHPLTTSARLESTSPTYPMSTRRFLAGS*KEVDA*NFP 1077
Score = 39.6 bits (80), Expect(5) = 1e-022
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +2 / -2
Query: 1370 PTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGS 1510
P RH S QAV+GSR + P MTGL H R GS
Sbjct: 764 PRRVRHVSSDSSYQAVIGSRKSLVPTPGGDQMTGLAGCLVHRRRRGS 624
Score = 31.8 bits (63), Expect(9) = 7e-085
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / +1
Query: 1266 TGMWECPDFYPVSK 1225
TG WEC DFYPV +
Sbjct: 874 TGEWECIDFYPVGR 915
Score = 30.4 bits (60), Expect(9) = 7e-085
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 639 RGGVGPFGLWVLASANRK 586
RG +GPFGL VLA+ +R+
Sbjct: 1465 RGALGPFGLLVLAAGDRR 1518
Score = 29.9 bits (59), Expect(5) = 1e-022
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTM 1726
P GSTV +P++ P +S A R RDT H+M
Sbjct: 542 PLGSTVMEPERTPRMSYHWSATMAIGRVRHWTRFRDTAWPHSM 414
Score = 24.4 bits (47), Expect(5) = 1e-022
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 1232 TG*KSGHSHIPV 1267
TG*KS HSH PV
Sbjct: 908 TG*KSMHSHSPV 873
>gb|BU994370.1|BU994370 HM06N08r HM Hordeum vulgare subsp. vulgare cDNA clone HM06N08
5-PRIME, mRNA sequence
Length = 590
Score = 248 bits (536), Expect(3) = 7e-084
Identities = 94/109 (86%), Positives = 100/109 (91%)
Frame = -1 / +3
Query: 1155 NSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDPAKRRRILWG 976
NSLDLRRYDYYTVGTY + ERYVPD+PAGDEH LRYDYGNFYASKTFYDP KRRRILWG
Sbjct: 12 NSLDLRRYDYYTVGTYDRKTERYVPDNPAGDEHHLRYDYGNFYASKTFYDPVKRRRILWG 191
Query: 975 WANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAK 829
WANESD A DDVAKGWAGIQAIPR VWLDPSG+QL+QWP+EE+EALR K
Sbjct: 192 WANESDAAVDDVAKGWAGIQAIPRKVWLDPSGRQLMQWPVEELEALRGK 338
Score = 149 bits (320), Expect(3) = 2e-049
Identities = 70/98 (71%), Positives = 72/98 (73%)
Frame = +2 / -2
Query: 830 FALSASTSSIGHCSSCFPLGSSHTVLGIAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS 1009
F LSAS+SS GHC SC PLGSS T LGIAWIPA PLATSS A SDSLAQP RMRRRL GS
Sbjct: 337 FPLSASSSSTGHCISCLPLGSSQTFLGIAWIPAHPLATSSTAASDSLAQPQRMRRRLTGS 158
Query: 1010 *NVLDA*KLPXXXXXXXXXPAGSSGTYRSALGWYVPTV 1123
* VL+A*KLP PAG SGTYRS L VPTV
Sbjct: 157 *KVLEA*KLP*S*RRWCSSPAGLSGTYRSVLRS*VPTV 44
Score = 64.8 bits (135), Expect(4) = 3e-025
Identities = 29/44 (65%), Positives = 31/44 (70%)
Frame = -2 / +1
Query: 992 AASCGAGLTSPTPPPTMWLKAGLESRRFQGRCGWTPVGSSCCSG 861
AAS GAG TSPTPP T + G ESRRF+ R GWT VG S CSG
Sbjct: 175 AASSGAGPTSPTPPSTTSPRDGPESRRFRERFGWTRVGGS*CSG 306
Score = 61.1 bits (127), Expect(3) = 7e-084
Identities = 23/35 (65%), Positives = 32/35 (91%)
Frame = -1 / +3
Query: 831 KSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEVS 727
+ V+++NRV+K G HVEVTG++T+QADVEVSFEV+
Sbjct: 339 RPVSIKNRVVKRGEHVEVTGLRTSQADVEVSFEVA 443
Score = 50.1 bits (103), Expect(3) = 2e-049
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = +2 / -2
Query: 731 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSS 856
TSKLTSTSAC V PVTST P L TLFL +T +++SS
Sbjct: 439 TSKLTSTSACEVRSPVTSTCSPRLTTLFLMLTGLFPLSASSS 314
Score = 42.3 bits (86), Expect(3) = 7e-084
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = -1 / +2
Query: 633 GVGPFGLWVLASANRKERTAV 571
GVGPFGLWVLAS+ +E+TAV
Sbjct: 527 GVGPFGLWVLASSKLEEKTAV 589
Score = 38.2 bits (77), Expect(4) = 3e-025
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -2 / +1
Query: 812 TG*SRQDITSR*PGYKRHRLTWR*A 738
TG S + TSR PGY HRLTWR*A
Sbjct: 358 TGWSSGESTSRSPGYGPHRLTWR*A 432
Score = 36.3 bits (73), Expect(3) = 2e-049
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = +2 / -3
Query: 572 TAVLSLRLAEASTHSPNGPTP 634
TAV S L EASTH P GPTP
Sbjct: 588 TAVFSSSLDEASTHRPKGPTP 526
Score = 34.5 bits (69), Expect(4) = 3e-025
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -3 / +2
Query: 1159 QEQPRPPAVRLLHRGHVPPE 1100
+EQPRP +RLLHR H+ P+
Sbjct: 8 REQPRPAPLRLLHRRHLRPQ 67
Score = 34.1 bits (68), Expect(4) = 3e-025
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1 / +3
Query: 756 ADVEVSFEVSPAALAGAETLDPALAYDAERL 664
+ +V A++ GAE LDPALA DA++L
Sbjct: 408 SQADVEVSFEVASIDGAEALDPALANDAQKL 500
>gb|BF260173.2|BF260173 HVSMEf0021E20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021E20f, mRNA sequence
Length = 790
Score = 205 bits (443), Expect(3) = 4e-082
Identities = 85/104 (81%), Positives = 93/104 (89%)
Frame = -1 / +3
Query: 537 KPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCIL 358
KP+VLMC+DPTKSSL P LY+PTFAGFVDTDIS+GKISLRSLIDRSVVESFGAGGKTCIL
Sbjct: 246 KPLVLMCSDPTKSSLTPGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCIL 425
Query: 357 SRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMNGA* 226
SRVYP +AIGKDA LYVFNNG K S+L AWE+ KP+MNGA*
Sbjct: 426 SRVYPXMAIGKDAHLYVFNNGETDFKGSQLKAWEINKPMMNGA* 557
Score = 160 bits (345), Expect(3) = 9e-053
Identities = 72/103 (69%), Positives = 80/103 (77%)
Frame = +2 / -1
Query: 230 APFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRS 409
APF+ G ISHA+ D L PLLNT*R AS P+A G TLERMQV PPAPKLSTT+RS
Sbjct: 553 APFIMGLLISHALSWDPLKSVSPLLNT*RCASFPIAMXGYTLERMQVFPPAPKLSTTERS 374
Query: 410 IRLLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGL 538
I+LL++I P EMSVSTNPANVG YR G RDDLVGS+HM T GL
Sbjct: 373 IKLLKEIFPDEMSVSTNPANVGLYRPGVRDDLVGSLHMRTRGL 245
Score = 101 bits (215), Expect(3) = 4e-082
Identities = 43/75 (57%), Positives = 53/75 (70%)
Frame = -1 / +3
Query: 747 EVSFEVSPAALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVF 568
+V A+L AE DPA A DA++LCG+K AD +GGVGPFGLWVLASA+ E+TAVF
Sbjct: 39 DVEVSFEVASLDKAEPFDPAYANDAQKLCGMKNADAKGGVGPFGLWVLASADLAEKTAVF 218
Query: 567 FRVFKPAAGDKPVVL 523
FRVFK G V++
Sbjct: 219 FRVFKDGYGKPLVLM 263
Score = 60.2 bits (125), Expect(3) = 9e-053
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = +2 / -1
Query: 542 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 664
P L TLK TAV S R AEA T P GPTPPL SA F PH
Sbjct: 244 PYPSLKTLKKTAVFSARSAEARTQRPKGPTPPLASAFFIPH 122
Score = 38.6 bits (78), Expect(3) = 4e-082
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = -1 / +3
Query: 789 HVEVTGIQTAQADVEVSFEVS 727
H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 3 HFEVTGLQSYQSDVEVSFEVA 65
Score = 26.3 bits (51), Expect(3) = 9e-053
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +2 / -1
Query: 731 TSKLTSTSACAVCIPVTS 784
TSKLTSTS C PVTS
Sbjct: 61 TSKLTSTSDW*DCRPVTS 8
>gb|BQ762965.1|BQ762965 EBro02_SQ006_O16_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ006_O16 5', mRNA sequence
Length = 557
Score = 200 bits (431), Expect(3) = 5e-081
Identities = 77/106 (72%), Positives = 92/106 (86%)
Frame = -1 / +2
Query: 1044 DYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQ 865
DYGNFYASKTFYDPAK RR+L GWANESD+ A D AKGWAGI AIPR +WLDPSGKQLLQ
Sbjct: 2 DYGNFYASKTFYDPAKNRRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGKQLLQ 181
Query: 864 WPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEVS 727
WP+EE+E LR K+V++ ++V+K G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 182 WPVEELEQLRGKAVSVGDKVVKPGQHFEVTGLQSYQSDVEVSFEVA 319
Score = 142 bits (304), Expect(3) = 2e-049
Identities = 69/103 (66%), Positives = 73/103 (70%)
Frame = +2 / -3
Query: 731 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLG 910
TSKLTSTS C PVTS P L TL +T LS S+SS GHCSSC PLGSSH LG
Sbjct: 315 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 136
Query: 911 IAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
IAW+PA PLA S A +SDSLAQP RR LAGS* VLDA*KLP
Sbjct: 135 IAWMPAHPLALSWATLSDSLAQPSSTRRFLAGS*KVLDA*KLP 7
Score = 101 bits (215), Expect(3) = 5e-081
Identities = 43/75 (57%), Positives = 53/75 (70%)
Frame = -1 / +2
Query: 747 EVSFEVSPAALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVF 568
+V A+L AE DPA A DA++LCG+K AD +GGVGPFGLWVLASA+ E+TAVF
Sbjct: 293 DVEVSFEVASLDKAEPFDPAYANDAQKLCGMKNADAKGGVGPFGLWVLASADLAEKTAVF 472
Query: 567 FRVFKPAAGDKPVVL 523
FRVFK G V++
Sbjct: 473 FRVFKDGYGKPLVLM 517
Score = 60.2 bits (125), Expect(3) = 2e-049
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = +2 / -3
Query: 542 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 664
P L TLK TAV S R AEA T P GPTPPL SA F PH
Sbjct: 498 PYPSLKTLKKTAVFSARSAEARTQRPKGPTPPLASAFFIPH 376
Score = 40.5 bits (82), Expect(3) = 5e-081
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -1 / +2
Query: 537 KPVVLMCTDPTKSSLNPNL 481
KP+VLMC+DPTKSSL P L
Sbjct: 500 KPLVLMCSDPTKSSLTPGL 556
Score = 34.1 bits (68), Expect(3) = 2e-049
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +2 / -3
Query: 482 RFGFRDDLVGSVHMSTTGL 538
R G RDDLVGS+HM T GL
Sbjct: 555 RPGVRDDLVGSLHMRTRGL 499
>emb|A48280.1| Sequence 1 from Patent WO9601904
Length = 2094
Score = 91.3 bits (193), Expect(9) = 5e-080
Identities = 35/55 (63%), Positives = 42/55 (76%)
Frame = -1 / +1
Query: 1053 LRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 889
LRYD+G FYAS +FYDPAK RR+L G+ E D+ DV KGWA IQ++PRTV LD
Sbjct: 1063 LRYDWGKFYASTSFYDPAKNRRVLMGYVGEVDSKRADVVKGWASIQSVPRTVALD 1227
Score = 80.8 bits (170), Expect(9) = 5e-080
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = -1 / +1
Query: 1848 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVW 1732
R+GYHFQ KN+++DPN MYY+GWYH FYQYNP G W
Sbjct: 289 RSGYHFQTAKNYMSDPNGLMYYRGWYHMFYQYNPVGTDW 405
Score = 69.8 bits (146), Expect(9) = 5e-080
Identities = 28/60 (46%), Positives = 35/60 (58%)
Frame = -1 / +1
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGPGPEQWRLLVGS 1366
+V+ +A P + +DPLLR W K NPVI G+ FRDP TAW E WR L+GS
Sbjct: 589 EVQCIATPADPNDPLLRRWTKHPANPVIWSPPGVGTKDFRDPMTAWYDESDETWRTLLGS 768
Score = 60.2 bits (125), Expect(5) = 1e-022
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +2 / -2
Query: 1736 TAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKWYPV 1846
+ P GLYW* WYHP *Y+ LGSL+ FL WKW P+
Sbjct: 401 SVPTGLYW*NMWYHPR*YIRPLGSLM*FLAVWKW*PL 291
Score = 46.0 bits (94), Expect(9) = 5e-080
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -1 / +1
Query: 1167 HVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGD 1063
HVLK S+D R+DYY++GTY A + P DP D
Sbjct: 946 HVLKASMDDERHDYYSLGTYDSAANTWTPIDPELD 1050
Score = 42.3 bits (86), Expect(9) = 5e-080
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -1 / +1
Query: 429 ISLRSLIDRSVVESFGAGGKTCILSRVYP 343
+S+R L+D S+V+ F GG+T + SRVYP
Sbjct: 1675 LSMRVLVDHSIVQGFDMGGRTTMTSRVYP 1761
Score = 42.3 bits (86), Expect(9) = 5e-080
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -1 / +1
Query: 1719 WAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
W H+VSR+L+ W L A+ D G SGS TVLP+G
Sbjct: 421 WGHAVSRNLVQWRTLPIAMVADQWYDILGVLSGSMTVLPNG 543
Score = 40.9 bits (83), Expect(5) = 1e-022
Identities = 24/50 (48%), Positives = 27/50 (54%)
Frame = +2 / -2
Query: 890 SSHTVLGIAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
S TVLG + A PL TS+ S S P RR LAGS* +DA* P
Sbjct: 1226 SRATVLGTD*MEAHPLTTSARLESTSPTYPMSTRRFLAGS*KEVDA*NFP 1077
Score = 39.6 bits (80), Expect(5) = 1e-022
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +2 / -2
Query: 1370 PTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGS 1510
P RH S QAV+GSR + P MTGL H R GS
Sbjct: 764 PRRVRHVSSDSSYQAVIGSRKSLVPTPGGDQMTGLAGCLVHRRRRGS 624
Score = 33.1 bits (66), Expect(9) = 5e-080
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1 / +1
Query: 873 LLQWPIEEVEALRAKSVTLRNRVIKAGHHVEV 778
LL WP+EE+E LR + L + I G + +
Sbjct: 1246 LLLWPVEEIETLRLNATELTDVTINTGSVIHI 1341
Score = 31.8 bits (63), Expect(9) = 5e-080
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / +1
Query: 1266 TGMWECPDFYPVSK 1225
TG WEC DFYPV +
Sbjct: 874 TGEWECIDFYPVGR 915
Score = 30.4 bits (60), Expect(9) = 5e-080
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 639 RGGVGPFGLWVLASANRK 586
RG +GPFGL VLA+ +R+
Sbjct: 1468 RGALGPFGLLVLAAGDRR 1521
Score = 29.9 bits (59), Expect(5) = 1e-022
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTM 1726
P GSTV +P++ P +S A R RDT H+M
Sbjct: 542 PLGSTVMEPERTPRMSYHWSATMAIGRVRHWTRFRDTAWPHSM 414
Score = 24.4 bits (47), Expect(5) = 1e-022
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 1232 TG*KSGHSHIPV 1267
TG*KS HSH PV
Sbjct: 908 TG*KSMHSHSPV 873
>gb|AV924971.1|AV924971 AV924971 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd17l01 5', mRNA sequence
Length = 577
Score = 208 bits (448), Expect(3) = 7e-078
Identities = 80/110 (72%), Positives = 96/110 (87%)
Frame = -1 / +2
Query: 1056 RLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 877
RL+YDYGNFYASKTFYDPAK RR+L GWANESD+ A D AKGWAGI AIPR +WLDPSGK
Sbjct: 41 RLQYDYGNFYASKTFYDPAKNRRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGK 220
Query: 876 QLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEVS 727
QLLQWP+EE+E LR K+V++ ++V+K G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 221 QLLQWPVEELEQLRGKAVSVGDKVVKPGQHFEVTGLQSYQSDVEVSFEVA 370
Score = 142 bits (304), Expect(2) = 8e-045
Identities = 69/103 (66%), Positives = 73/103 (70%)
Frame = +2 / -2
Query: 731 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLG 910
TSKLTSTS C PVTS P L TL +T LS S+SS GHCSSC PLGSSH LG
Sbjct: 366 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 187
Query: 911 IAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
IAW+PA PLA S A +SDSLAQP RR LAGS* VLDA*KLP
Sbjct: 186 IAWMPAHPLALSWATLSDSLAQPSSTRRFLAGS*KVLDA*KLP 58
Score = 101 bits (215), Expect(3) = 7e-078
Identities = 43/75 (57%), Positives = 53/75 (70%)
Frame = -1 / +2
Query: 747 EVSFEVSPAALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVF 568
+V A+L AE DPA A DA++LCG+K AD +GGVGPFGLWVLASA+ E+TAVF
Sbjct: 344 DVEVSFEVASLDKAEPFDPAYANDAQKLCGMKNADAKGGVGPFGLWVLASADLAEKTAVF 523
Query: 567 FRVFKPAAGDKPVVL 523
FRVFK G V++
Sbjct: 524 FRVFKDGYGKPLVLM 568
Score = 60.2 bits (125), Expect(2) = 8e-045
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = +2 / -2
Query: 542 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 664
P L TLK TAV S R AEA T P GPTPPL SA F PH
Sbjct: 549 PYPSLKTLKKTAVFSARSAEARTQRPKGPTPPLASAFFIPH 427
Score = 22.1 bits (42), Expect(3) = 7e-078
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -1 / +2
Query: 537 KPVVLMCTD 511
KP+VLMC+D
Sbjct: 551 KPLVLMCSD 577
>gb|BE559132.2|BE559132 HV_CEb0023A11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023A11f, mRNA sequence
Length = 533
Score = 164 bits (353), Expect(3) = 1e-071
Identities = 63/96 (65%), Positives = 79/96 (82%)
Frame = -1 / +2
Query: 1014 FYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALR 835
FY P + R+L GWANESD+ A D AKGWAGI AIPR +WLDPSGKQLLQWP+EE+E LR
Sbjct: 2 FYXPGQEPRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGKQLLQWPVEELEQLR 181
Query: 834 AKSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEVS 727
K+V++ ++V+K G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 182 GKAVSVGDKVVKPGQHFEVTGLQSYQSDVEVSFEVA 289
Score = 118 bits (253), Expect(3) = 2e-043
Identities = 58/94 (61%), Positives = 62/94 (65%)
Frame = +2 / -3
Query: 731 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLG 910
TSKLTSTS C PVTS P L TL +T LS S+SS GHCSSC PLGSSH LG
Sbjct: 285 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 106
Query: 911 IAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS* 1012
IAW+PA PLA S A +SDSLAQP R GS*
Sbjct: 105 IAWMPAHPLALSWATLSDSLAQPSSTRGSWPGS* 4
Score = 101 bits (215), Expect(3) = 1e-071
Identities = 43/75 (57%), Positives = 53/75 (70%)
Frame = -1 / +2
Query: 747 EVSFEVSPAALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVF 568
+V A+L AE DPA A DA++LCG+K AD +GGVGPFGLWVLASA+ E+TAVF
Sbjct: 263 DVEVSFEVASLDKAEPFDPAYANDAQKLCGMKNADAKGGVGPFGLWVLASADLAEKTAVF 442
Query: 567 FRVFKPAAGDKPVVL 523
FRVFK G V++
Sbjct: 443 FRVFKDGYGKPLVLM 487
Score = 60.2 bits (125), Expect(3) = 2e-043
Identities = 26/41 (63%), Positives = 26/41 (63%)
Frame = +2 / -3
Query: 542 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 664
P L TLK TAV S R AEA T P GPTPPL SA F PH
Sbjct: 468 PYPSLKTLKKTAVFSARSAEARTQRPKGPTPPLASAFFIPH 346
Score = 44.6 bits (91), Expect(3) = 1e-071
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = -1 / +2
Query: 537 KPVVLMCTDPTKSSLNPNLYR 475
KP+VLMC+DPTKSSL P LY+
Sbjct: 470 KPLVLMCSDPTKSSLTPGLYK 532
Score = 37.3 bits (75), Expect(3) = 2e-043
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / -3
Query: 479 YRFGFRDDLVGSVHMSTTGL 538
YR G RDDLVGS+HM T GL
Sbjct: 528 YRPGVRDDLVGSLHMRTRGL 469
>gb|BU973477.1|BU973477 HB25B07r BC Hordeum vulgare subsp. vulgare cDNA clone HB25B07
5-PRIME, mRNA sequence
Length = 477
Score = 199 bits (430), Expect(2) = 1e-071
Identities = 80/99 (80%), Positives = 92/99 (92%)
Frame = -1 / +1
Query: 549 AAGDKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGK 370
+ +KPVVLMC+DPT SSLNPNLY+PTFAGFVDTDI+ GKISLRSLIDRSVVESFGAGG+
Sbjct: 181 STNNKPVVLMCSDPTMSSLNPNLYKPTFAGFVDTDIAKGKISLRSLIDRSVVESFGAGGR 360
Query: 369 TCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEM 253
TCILSRVYP+LA+GK+ARL+VFNNG+ +KVS LTAWEM
Sbjct: 361 TCILSRVYPTLALGKNARLHVFNNGKVDIKVSELTAWEM 477
Score = 169 bits (364), Expect(2) = 2e-052
Identities = 77/95 (81%), Positives = 78/95 (82%)
Frame = +2 / -2
Query: 254 ISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRSIRLLRDIL 433
ISHAV DTL LPLL T*RRA LP AS G*T ERMQVLPPAPKLSTTDRSIRLLRDIL
Sbjct: 476 ISHAVSSDTLMSTLPLLKT*RRAFLPSASVG*TRERMQVLPPAPKLSTTDRSIRLLRDIL 297
Query: 434 PFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGL 538
P MSVST PA VG YRFGFRDD+VGS HM TTGL
Sbjct: 296 PLAMSVSTKPAKVGLYRFGFRDDMVGSEHMRTTGL 192
Score = 105 bits (223), Expect = 1e-021
Identities = 46/73 (63%), Positives = 52/73 (71%)
Frame = -3 / +3
Query: 472 DICRICRHGHLERQDIPEKPDRPVGR*ELRSRGQDLHPLQGLPVAGHRQGRSPLRVQQRE 293
D+ R+C H H + QDI EKPDR V R ELR RGQDLHPL GLP A Q RSP R+QQR+
Sbjct: 258 DLRRLC*H*HSQGQDISEKPDRSVRRGELRGRGQDLHPLPGLPDARAGQERSPSRLQQRQ 437
Query: 292 GARQGVPSHRVGD 254
G QGV +H VGD
Sbjct: 438 GGHQGVGAHGVGD 476
Score = 104 bits (222), Expect(2) = 3e-031
Identities = 47/72 (65%), Positives = 55/72 (76%)
Frame = +1 / -1
Query: 253 HLPRGETGHLDVRPPVVEHVEASVLADGQRRVDPGEDAGLAPGSEALNDRPVDQASQGYL 432
HLPR E HLDV VVE V+ASVLA +RRVDPGEDAG AP EAL+D P+DQASQ YL
Sbjct: 477 HLPRRELRHLDVHLAVVEDVKASVLAQRERRVDPGEDAGPAPCPEALHDGPIDQASQRYL 298
Query: 433 AVRDVRVDKSCK 468
A+ V V+K+C+
Sbjct: 297 ALGYVSVNKACE 262
Score = 91.8 bits (194), Expect(2) = 1e-071
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = -1 / +1
Query: 705 ETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPA 547
E LDPALA DA++LC ++ A V GGVGPFGLWVLAS+ +E+TAVFFRVFK A
Sbjct: 10 EALDPALANDAQKLCSMRGAHVEGGVGPFGLWVLASSKLEEKTAVFFRVFKAA 168
Score = 58.3 bits (121), Expect(2) = 2e-052
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +1 / -1
Query: 550 GLEHPEEHRGSLLAVGGGQHPQPERPHAAPHVRALHAAQ 666
GLEHPEE R LL +G G+HPQ E HAA HV HAAQ
Sbjct: 165 GLEHPEEDRRLLLQLGRGEHPQAEGAHAAFHVGTPHAAQ 49
Score = 52.4 bits (108), Expect(2) = 3e-031
Identities = 24/39 (61%), Positives = 24/39 (61%)
Frame = +2 / -2
Query: 548 AGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 664
A LNT K TAV S L EASTH P GPTPP T A H
Sbjct: 167 AALNTRKKTAVFSSSLDEASTHRPKGPTPPSTWAPLMLH 51
>gb|BF064963.3|BF064963 HV_CEb0022D03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022D03f, mRNA sequence
Length = 690
Score = 216 bits (467), Expect(2) = 3e-071
Identities = 89/104 (85%), Positives = 97/104 (93%)
Frame = -1 / +1
Query: 537 KPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCIL 358
KP+VLMC+DPTKSSL P LY+PTFAGFVDTDIS+GKISLRSLIDRSVVESFGAGGKTCIL
Sbjct: 121 KPLVLMCSDPTKSSLTPGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCIL 300
Query: 357 SRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMNGA* 226
SRVYPS+AIGKDA LYVFNNG +KVS+L AWEMKKP+MNGA*
Sbjct: 301 SRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEMKKPMMNGA* 432
Score = 172 bits (370), Expect(2) = 6e-052
Identities = 76/103 (73%), Positives = 84/103 (81%)
Frame = +2 / -2
Query: 230 APFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRS 409
APF+ GFFISHA+ DTL PLLNT*R AS P+A DG TLERMQV PPAPKLSTT+RS
Sbjct: 428 APFIMGFFISHALSWDTLISVSPLLNT*RCASFPIAMDGYTLERMQVFPPAPKLSTTERS 249
Query: 410 IRLLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGL 538
I+LL++I P EMSVSTNPANVG YR G RDDLVGS+HM T GL
Sbjct: 248 IKLLKEIFPDEMSVSTNPANVGLYRPGVRDDLVGSLHMRTRGL 120
Score = 73.9 bits (155), Expect(2) = 3e-071
Identities = 30/46 (65%), Positives = 36/46 (78%)
Frame = -1 / +1
Query: 660 GVKRADVRGGVGPFGLWVLASANRKERTAVFFRVFKPAAGDKPVVL 523
G+K AD +GGVGPFGLWVLASA+ E+TAVFFRVFK G V++
Sbjct: 1 GMKNADAKGGVGPFGLWVLASADLAEKTAVFFRVFKDGYGKPLVLM 138
Score = 53.8 bits (111), Expect(2) = 6e-052
Identities = 24/38 (63%), Positives = 24/38 (63%)
Frame = +2 / -2
Query: 542 PAAGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARF 655
P L TLK TAV S R AEA T P GPTPPL SA F
Sbjct: 119 PYPSLKTLKKTAVFSARSAEARTQRPKGPTPPLASAFF 6
>gb|BU996678.1|BU996678 HM14G07r HM Hordeum vulgare subsp. vulgare cDNA clone HM14G07
5-PRIME, mRNA sequence
Length = 540
Score = 186 bits (400), Expect(2) = 6e-070
Identities = 75/94 (79%), Positives = 87/94 (92%)
Frame = -1 / +1
Query: 549 AAGDKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGK 370
+ +KPVVLMC+DPT SSLNPNLY+PTFAGFVDTDI+ GKISLRSLIDRSVVESFGAGG+
Sbjct: 259 STNNKPVVLMCSDPTMSSLNPNLYKPTFAGFVDTDIAKGKISLRSLIDRSVVESFGAGGR 438
Query: 369 TCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRL 268
TCILSRVYP+LA+GK+ARL+VFNNG+ +KVS L
Sbjct: 439 TCILSRVYPTLALGKNARLHVFNNGKVDIKVSEL 540
Score = 159 bits (342), Expect(3) = 6e-052
Identities = 72/88 (81%), Positives = 73/88 (82%)
Frame = +2 / -2
Query: 275 DTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRSIRLLRDILPFEMSVS 454
DTL LPLL T*RRA LP AS G*T ERMQVLPPAPKLSTTDRSIRLLRDILP MSVS
Sbjct: 533 DTLMSTLPLLKT*RRAFLPSASVG*TRERMQVLPPAPKLSTTDRSIRLLRDILPLAMSVS 354
Query: 455 TNPANVGRYRFGFRDDLVGSVHMSTTGL 538
T PA VG YRFGFRDD+VGS HM TTGL
Sbjct: 353 TKPAKVGLYRFGFRDDMVGSEHMRTTGL 270
Score = 100 bits (212), Expect(2) = 6e-070
Identities = 41/70 (58%), Positives = 52/70 (74%)
Frame = -1 / +1
Query: 756 ADVEVSFEVSPAALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERT 577
+ +V A++ GAE LDPALA DA++LC ++ A V GGVGPFGLWVLAS+ +E+T
Sbjct: 37 SQADVEVSFEVASIDGAEALDPALANDAQKLCSMRGAHVEGGVGPFGLWVLASSKLEEKT 216
Query: 576 AVFFRVFKPA 547
AVFFRVFK A
Sbjct: 217 AVFFRVFKAA 246
Score = 95.5 bits (202), Expect(3) = 5e-021
Identities = 42/66 (63%), Positives = 47/66 (71%)
Frame = -3 / +3
Query: 472 DICRICRHGHLERQDIPEKPDRPVGR*ELRSRGQDLHPLQGLPVAGHRQGRSPLRVQQRE 293
D+ R+C H H + QDI EKPDR V R ELR RGQDLHPL GLP A Q RSP R+QQR+
Sbjct: 336 DLRRLC*H*HSQGQDISEKPDRSVRRGELRGRGQDLHPLPGLPDARAGQERSPSRLQQRQ 515
Query: 292 GARQGV 275
G QGV
Sbjct: 516 GGHQGV 533
Score = 94.5 bits (200), Expect(3) = 5e-030
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = +1 / -1
Query: 268 ETGHLDVRPPVVEHVEASVLADGQRRVDPGEDAGLAPGSEALNDRPVDQASQGYLAVRDV 447
E HLDV VVE V+ASVLA +RRVDPGEDAG AP EAL+D P+DQASQ YLA+ V
Sbjct: 540 ELRHLDVHLAVVEDVKASVLAQRERRVDPGEDAGPAPCPEALHDGPIDQASQRYLALGYV 361
Query: 448 RVDKSCK 468
V+K+C+
Sbjct: 360 SVNKACE 340
Score = 58.3 bits (121), Expect(3) = 6e-052
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = +1 / -1
Query: 550 GLEHPEEHRGSLLAVGGGQHPQPERPHAAPHVRALHAAQ 666
GLEHPEE R LL +G G+HPQ E HAA HV HAAQ
Sbjct: 243 GLEHPEEDRRLLLQLGRGEHPQAEGAHAAFHVGTPHAAQ 127
Score = 52.4 bits (108), Expect(3) = 5e-030
Identities = 24/39 (61%), Positives = 24/39 (61%)
Frame = +2 / -2
Query: 548 AGLNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 664
A LNT K TAV S L EASTH P GPTPP T A H
Sbjct: 245 AALNTRKKTAVFSSSLDEASTHRPKGPTPPSTWAPLMLH 129
Score = 28.1 bits (55), Expect(3) = 5e-021
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = -1 / +1
Query: 768 QTAQADVEVSFEVS 727
+T+QADVEVSFEV+
Sbjct: 31 RTSQADVEVSFEVA 72
Score = 26.7 bits (52), Expect(3) = 6e-052
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / -2
Query: 731 TSKLTSTSACAV 766
TSKLTSTSAC V
Sbjct: 68 TSKLTSTSACEV 33
Score = 23.5 bits (45), Expect(3) = 5e-030
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / -1
Query: 730 HFEAHLHVSL 759
H +AHLHVSL
Sbjct: 69 HLKAHLHVSL 40
Score = 21.7 bits (41), Expect(3) = 5e-021
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2 / +2
Query: 614 CGCWPPPTARR 582
CGC P P+ RR
Sbjct: 179 CGCSPRPSWRR 211
>gb|AV924972.1|AV924972 AV924972 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd17l02 5', mRNA sequence
Length = 549
Score = 208 bits (448), Expect(2) = 6e-069
Identities = 80/110 (72%), Positives = 96/110 (87%)
Frame = -1 / +2
Query: 1056 RLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 877
RL+YDYGNFYASKTFYDPAK RR+L GWANESD+ A D AKGWAGI AIPR +WLDPSGK
Sbjct: 80 RLQYDYGNFYASKTFYDPAKNRRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGK 259
Query: 876 QLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEVS 727
QLLQWP+EE+E LR K+V++ ++V+K G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 260 QLLQWPVEELEQLRGKAVSVGDKVVKPGQHFEVTGLQSYQSDVEVSFEVA 409
Score = 142 bits (304), Expect(2) = 5e-040
Identities = 69/103 (66%), Positives = 73/103 (70%)
Frame = +2 / -1
Query: 731 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLG 910
TSKLTSTS C PVTS P L TL +T LS S+SS GHCSSC PLGSSH LG
Sbjct: 405 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 226
Query: 911 IAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
IAW+PA PLA S A +SDSLAQP RR LAGS* VLDA*KLP
Sbjct: 225 IAWMPAHPLALSWATLSDSLAQPSSTRRFLAGS*KVLDA*KLP 97
Score = 74.8 bits (157), Expect(2) = 6e-069
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -1 / +2
Query: 747 EVSFEVSPAALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKE 583
+V A+L A DPA A DA++LCG+K AD +GGVGPFGLWVLASA+ E
Sbjct: 383 DVEVSFEVASLDKAXPFDPAYANDAQKLCGMKNADAKGGVGPFGLWVLASADLAE 547
Score = 44.1 bits (90), Expect(2) = 5e-040
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = +2 / -1
Query: 584 SLRLAEASTHSPNGPTPPLTSARFTPH 664
S R AEA T P GPTPPL SA F PH
Sbjct: 546 SARSAEARTQRPKGPTPPLASAFFIPH 466
>gb|AL505748.1|AL505748 AL505748 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09G14V 5', mRNA sequence
Length = 465
Score = 205 bits (443), Expect(2) = 1e-068
Identities = 79/110 (71%), Positives = 95/110 (86%)
Frame = -1 / +1
Query: 1056 RLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 877
R +YDYGNFYASKTFYDPAK RR+L GWANESD+ A D AKGWAGI AIPR +WLDPSGK
Sbjct: 4 RXQYDYGNFYASKTFYDPAKNRRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGK 183
Query: 876 QLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEVS 727
QLLQWP+EE+E LR K+V++ ++V+K G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 184 QLLQWPVEELEQLRGKAVSVGDKVVKPGQHFEVTGLQSYQSDVEVSFEVA 333
Score = 142 bits (304), Expect(2) = 1e-039
Identities = 69/103 (66%), Positives = 73/103 (70%)
Frame = +2 / -2
Query: 731 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLG 910
TSKLTSTS C PVTS P L TL +T LS S+SS GHCSSC PLGSSH LG
Sbjct: 329 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 150
Query: 911 IAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
IAW+PA PLA S A +SDSLAQP RR LAGS* VLDA*KLP
Sbjct: 149 IAWMPAHPLALSWATLSDSLAQPSSTRRFLAGS*KVLDA*KLP 21
Score = 76.2 bits (160), Expect(2) = 1e-068
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = -1 / +1
Query: 747 EVSFEVSPAALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASAN 592
+V A+L AE DPA A DA++LCG+K AD +GGVGPFGLWVLASA+
Sbjct: 307 DVEVSFEVASLDKAEPXDPAYANDAQKLCGMKNADAKGGVGPFGLWVLASAD 462
Score = 42.8 bits (87), Expect(2) = 1e-039
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 590 RLAEASTHSPNGPTPPLTSARFTPH 664
R AEA T P GPTPPL SA F PH
Sbjct: 464 RSAEARTQRPKGPTPPLASAFFIPH 390
>gb|BF267660.3|BF267660 HV_CEa0018I16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018I16f, mRNA sequence
Length = 519
Score = 208 bits (448), Expect(3) = 1e-067
Identities = 80/110 (72%), Positives = 96/110 (87%)
Frame = -1 / +3
Query: 1056 RLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGK 877
RL+YDYGNFYASKTFYDPAK RR+L GWANESD+ A D AKGWAGI AIPR +WLDPSGK
Sbjct: 39 RLQYDYGNFYASKTFYDPAKNRRVLLGWANESDSVAHDNAKGWAGIHAIPRKIWLDPSGK 218
Query: 876 QLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEVS 727
QLLQWP+EE+E LR K+V++ ++V+K G H EVTG+Q+ Q+DVEVSFEV+
Sbjct: 219 QLLQWPVEELEQLRGKAVSVGDKVVKPGQHFEVTGLQSYQSDVEVSFEVA 368
Score = 142 bits (304), Expect(2) = 4e-035
Identities = 69/103 (66%), Positives = 73/103 (70%)
Frame = +2 / -3
Query: 731 TSKLTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLG 910
TSKLTSTS C PVTS P L TL +T LS S+SS GHCSSC PLGSSH LG
Sbjct: 364 TSKLTSTSDW*DCRPVTSKCWPGLTTLSPTLTALPLSCSSSSTGHCSSCLPLGSSHIFLG 185
Query: 911 IAWIPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
IAW+PA PLA S A +SDSLAQP RR LAGS* VLDA*KLP
Sbjct: 184 IAWMPAHPLALSWATLSDSLAQPSSTRRFLAGS*KVLDA*KLP 56
Score = 65.7 bits (137), Expect(3) = 1e-067
Identities = 27/48 (56%), Positives = 32/48 (66%)
Frame = -1 / +3
Query: 747 EVSFEVSPAALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVL 604
+V A+L AE DPA A DA++LCG+K AD R GVGPF LWVL
Sbjct: 342 DVEVSFEVASLDKAEPFDPAYANDAQKLCGMKNADPRAGVGPFALWVL 485
Score = 27.6 bits (54), Expect(2) = 4e-035
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2 / -3
Query: 608 THSPNGPTPPLTSARFTPH 664
T GPTP L SA F PH
Sbjct: 481 TQRAKGPTPALGSAFFIPH 425
Score = 23.5 bits (45), Expect(3) = 1e-067
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1 / +3
Query: 1089 YVPDDPAGDEHR 1054
YVPD+P GD ++
Sbjct: 3 YVPDNPTGDVYQ 38
>gb|BQ468801.1|BQ468801 HM02G04r HM Hordeum vulgare subsp. vulgare cDNA clone HM02G04
5-PRIME, mRNA sequence
Length = 502
Score = 114 bits (244), Expect(4) = 2e-065
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = -1 / +1
Query: 1206 GLETSVPPGPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRY 1045
GL+TSV GPRVKHVLKNSLDLRRYDYYTVGTY + ERYVPD+PAGDEH LRY
Sbjct: 340 GLDTSVVSGPRVKHVLKNSLDLRRYDYYTVGTYDRKTERYVPDNPAGDEHHLRY 501
Score = 102 bits (218), Expect(4) = 2e-065
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = -1 / +1
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGPG 1396
+V+N+A+PKN SDPLLREWVKP NP+IVPEGGIN TQFRDPTTAW G
Sbjct: 10 EVQNIAFPKNKSDPLLREWVKPRGNPIIVPEGGINATQFRDPTTAWYADG 159
Score = 79.0 bits (166), Expect(4) = 9e-037
Identities = 35/49 (71%), Positives = 35/49 (71%)
Frame = +2 / -3
Query: 1397 PGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRT 1543
P AVVGSRN V LMPPSGTM GL GFTHSRSSGSD F G A F T
Sbjct: 158 PSAYHAVVGSRNWVALMPPSGTMIGLPRGFTHSRSSGSDLFLGKAMFCT 12
Score = 67.0 bits (140), Expect(4) = 2e-065
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = -1 / +1
Query: 1356 SSPPRGVAYVYXXXXXXXXXXXXRPLHSAPTGMWECPDFYPVSKGGAPR 1210
S RGVAYVY +PLHSAPTGMWECPD YPV+ G R
Sbjct: 187 SGASRGVAYVYRSRDFMRWTRVRKPLHSAPTGMWECPDLYPVTADGRHR 333
Score = 61.1 bits (127), Expect(4) = 9e-037
Identities = 25/50 (50%), Positives = 29/50 (58%)
Frame = +2 / -3
Query: 1220 PPLLTG*KSGHSHIPVGAECSGXXXXXXXXXXXXXYTYATPRGGDDPAAL 1369
P +TG +SGHSHIPVGAECSG YTYATPR + A +
Sbjct: 323 PSAVTGYRSGHSHIPVGAECSGFLTRVHRMKSRLRYTYATPRDAPESAPM 174
Score = 40.0 bits (81), Expect(4) = 9e-037
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2 / -3
Query: 1151 LFLSTCLTLGPGGTDVSSP 1207
LFLSTC TLGP TDVSSP
Sbjct: 395 LFLSTCFTLGPDTTDVSSP 339
Score = 30.9 bits (61), Expect(4) = 9e-037
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 1067 PAGSSGTYRSALGWYVPTV 1123
PAG SGTYRS L VPTV
Sbjct: 479 PAGLSGTYRSVLRS*VPTV 423
Score = 23.5 bits (45), Expect(4) = 2e-065
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = -1 / +1
Query: 1386 WRLLVGSAAGSS 1351
WRLL+G+ +G+S
Sbjct: 163 WRLLIGALSGAS 198
>gb|BE559434.1|BE559434 HV_CEb0024K20f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024K20f, mRNA sequence
Length = 513
Score = 232 bits (502), Expect(2) = 2e-061
Identities = 84/102 (82%), Positives = 93/102 (91%)
Frame = -1 / +1
Query: 1902 EAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNI 1723
EA AAT VP SI++PLLRTGYHFQPP NWINDPN P+YYKGWYH FYQYNPKGAVWGNI
Sbjct: 166 EAEAATPSVPASILSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNPKGAVWGNI 345
Query: 1722 VWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
+WAHSVSRDLINW+ALEPA++PSIP D+YG WSGSAT+LPDG
Sbjct: 346 IWAHSVSRDLINWMALEPAIKPSIPTDQYGVWSGSATILPDG 471
Score = 175 bits (377), Expect(2) = 7e-044
Identities = 72/94 (76%), Positives = 75/94 (79%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PSG VA+PDQ PY S GM GL AGSSA QLMRSRDTECA MLPHTAPLGLYW* KWYH
Sbjct: 470 PSGRMVAEPDQTPYWSVGMEGLMAGSSAIQLMRSRDTECAQMMLPHTAPLGLYW*NKWYH 291
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 1879
PL* G GSLIQF+GGWKW PV SRGL M+ GT
Sbjct: 290 PL**SGPFGSLIQFMGGWKW*PVRSRGLRMEAGT 189
Score = 136 bits (291), Expect = 5e-031
Identities = 58/95 (61%), Positives = 67/95 (70%)
Frame = -3 / +3
Query: 1912 PRSRGCCGDGPGAAVHRQPPAQDGVPLPAPQELDQ*SQRAHVLQGVVPFLLPIQSQGRRM 1733
P RG GD A +H QPPA DG+PLP P ELDQ S+ A +LQG+VP +LP+Q QGR +
Sbjct: 156 PEPRGRGGDAVRAGLHSQPPAPDGLPLPTPHELDQRSKWAALLQGMVPLVLPVQPQGRGV 335
Query: 1732 GQHRVGALGVARPHQLGGARAGAQTKHPGRQVRLL 1628
GQH +GALGV RPHQL GA AG Q HP R VR L
Sbjct: 336 GQHHLGALGVPRPHQLDGAGAGHQALHPHRPVRRL 440
Score = 24.9 bits (48), Expect(2) = 2e-061
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVDHP 1558
G P ++YTG+D P
Sbjct: 469 GTPAMLYTGIDRP 507
Score = 23.5 bits (45), Expect(2) = 7e-044
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / -2
Query: 1928 TTCDAPASCNSSS 1966
T+ DAPASC SS
Sbjct: 152 TSWDAPASCRRSS 114
>gb|BJ467660.1|BJ467660 BJ467660 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29e15 3', mRNA sequence
Length = 602
Score = 216 bits (467), Expect(2) = 1e-058
Identities = 89/104 (85%), Positives = 97/104 (93%)
Frame = -1 / -3
Query: 537 KPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCIL 358
KP+VLMC+DPTKSSL P LY+PTFAGFVDTDIS+GKISLRSLIDRSVVESFGAGGKTCIL
Sbjct: 540 KPLVLMCSDPTKSSLTPGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCIL 361
Query: 357 SRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMNGA* 226
SRVYPS+AIGKDA LYVFNNG +KVS+L AWEMKKP+MNGA*
Sbjct: 360 SRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEMKKPMMNGA* 229
Score = 172 bits (370), Expect(2) = 1e-043
Identities = 76/103 (73%), Positives = 84/103 (81%)
Frame = +2 / +2
Query: 230 APFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRS 409
APF+ GFFISHA+ DTL PLLNT*R AS P+A DG TLERMQV PPAPKLSTT+RS
Sbjct: 233 APFIMGFFISHALSWDTLISVSPLLNT*RCASFPIAMDGYTLERMQVFPPAPKLSTTERS 412
Query: 410 IRLLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGL 538
I+LL++I P EMSVSTNPANVG YR G RDDLVGS+HM T GL
Sbjct: 413 IKLLKEIFPDEMSVSTNPANVGLYRPGVRDDLVGSLHMRTRGL 541
Score = 31.8 bits (63), Expect(2) = 1e-058
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -3
Query: 600 SANRKERTAVFFRVFKPAAGDKPVVL 523
SA+ E+TAVFFRVFK G V++
Sbjct: 600 SADLAEKTAVFFRVFKDGYGKPLVLM 523
Score = 25.8 bits (50), Expect(2) = 1e-043
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2 / +2
Query: 542 PAAGLNTLKNTAVLSLRLAE 601
P L TLK TAV S R AE
Sbjct: 542 PYPSLKTLKKTAVFSARSAE 601
>gb|BF628700.2|BF628700 HVSMEb0007E05f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0007E05f, mRNA sequence
Length = 694
Score = 161 bits (347), Expect(2) = 5e-058
Identities = 57/84 (67%), Positives = 66/84 (78%)
Frame = -1 / +3
Query: 1848 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDLINWVALEP 1669
RT +HFQP KNW+NDPN P+YYKGWYH FYQ+NP GAVWGNI W H+VSRDL++W+ L P
Sbjct: 219 RTAFHFQPQKNWMNDPNGPLYYKGWYHLFYQWNPDGAVWGNITWGHAVSRDLVHWLHLPP 398
Query: 1668 ALRPSIPGDRYGCWSGSATVLPDG 1597
A+ P D G WSGSAT LPDG
Sbjct: 399 AMVPDHWYDINGVWSGSATQLPDG 470
Score = 112 bits (239), Expect(2) = 6e-031
Identities = 48/83 (57%), Positives = 53/83 (63%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
PSGS VA+P Q P +S G AG +Q RSRDT H M PHTAP G +W*K+ YH
Sbjct: 469 PSGSCVAEPLQTPLMSYQWSGTMAGGRWSQWTRSRDTAWPHVMFPHTAPSGFHW*KR*YH 290
Query: 1778 PL*YMGALGSLIQFLGGWKWYPV 1846
PL*Y G LGS IQF GWKW V
Sbjct: 289 PL*YSGPLGSFIQFFWGWKWNAV 221
Score = 84.5 bits (178), Expect(2) = 5e-058
Identities = 33/60 (55%), Positives = 40/60 (66%)
Frame = -1 / +3
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGPGPEQWRLLVGS 1366
QV+ +A P + SDPLLR W K NPV+VP GI +T FRDPTTAW P WR+ +GS
Sbjct: 513 QVQLLAEPADPSDPLLRGWAKSESNPVLVPPPGIGLTGFRDPTTAWLNPTDRAWRITIGS 692
Score = 43.2 bits (88), Expect(2) = 6e-031
Identities = 24/54 (44%), Positives = 25/54 (46%)
Frame = +2 / -1
Query: 1370 PTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYA 1531
P R G AVVGSR V+ MP GT TG RSSGSD G A
Sbjct: 688 PMVIRQALSVGLSHAVVGSRKPVSPMPGGGTRTGFDSDLAQPRSSGSDGSAGSA 527
>gb|BJ457246.1|BJ457246 BJ457246 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak26o06 3', mRNA sequence
Length = 581
Score = 216 bits (467), Expect(2) = 7e-058
Identities = 89/104 (85%), Positives = 97/104 (93%)
Frame = -1 / -2
Query: 537 KPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCIL 358
KP+VLMC+DPTKSSL P LY+PTFAGFVDTDIS+GKISLRSLIDRSVVESFGAGGKTCIL
Sbjct: 532 KPLVLMCSDPTKSSLTPGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCIL 353
Query: 357 SRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMNGA* 226
SRVYPS+AIGKDA LYVFNNG +KVS+L AWEMKKP+MNGA*
Sbjct: 352 SRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEMKKPMMNGA* 221
Score = 172 bits (370), Expect = 6e-042
Identities = 76/103 (73%), Positives = 84/103 (81%)
Frame = +2 / +3
Query: 230 APFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRS 409
APF+ GFFISHA+ DTL PLLNT*R AS P+A DG TLERMQV PPAPKLSTT+RS
Sbjct: 225 APFIMGFFISHALSWDTLISVSPLLNT*RCASFPIAMDGYTLERMQVFPPAPKLSTTERS 404
Query: 410 IRLLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGL 538
I+LL++I P EMSVSTNPANVG YR G RDDLVGS+HM T GL
Sbjct: 405 IKLLKEIFPDEMSVSTNPANVGLYRPGVRDDLVGSLHMRTRGL 533
Score = 29.0 bits (57), Expect(2) = 7e-058
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / -2
Query: 585 ERTAVFFRVFKPAAGDKPVVL 523
E+TAVFFRVFK G V++
Sbjct: 577 EKTAVFFRVFKDGYGKPLVLM 515
>gb|BJ449827.1|BJ449827 BJ449827 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak26o06 5', mRNA sequence
Length = 600
Score = 216 bits (467), Expect(2) = 4e-057
Identities = 89/104 (85%), Positives = 97/104 (93%)
Frame = -1 / +3
Query: 537 KPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCIL 358
KP+VLMC+DPTKSSL P LY+PTFAGFVDTDIS+GKISLRSLIDRSVVESFGAGGKTCIL
Sbjct: 51 KPLVLMCSDPTKSSLTPGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCIL 230
Query: 357 SRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVMNGA* 226
SRVYPS+AIGKDA LYVFNNG +KVS+L AWEMKKP+MNGA*
Sbjct: 231 SRVYPSMAIGKDAHLYVFNNGETDIKVSQLKAWEMKKPMMNGA* 362
Score = 172 bits (370), Expect = 6e-042
Identities = 76/103 (73%), Positives = 84/103 (81%)
Frame = +2 / -3
Query: 230 APFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRS 409
APF+ GFFISHA+ DTL PLLNT*R AS P+A DG TLERMQV PPAPKLSTT+RS
Sbjct: 358 APFIMGFFISHALSWDTLISVSPLLNT*RCASFPIAMDGYTLERMQVFPPAPKLSTTERS 179
Query: 410 IRLLRDILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGL 538
I+LL++I P EMSVSTNPANVG YR G RDDLVGS+HM T GL
Sbjct: 178 IKLLKEIFPDEMSVSTNPANVGLYRPGVRDDLVGSLHMRTRGL 50
Score = 26.7 bits (52), Expect(2) = 4e-057
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1 / +3
Query: 582 RTAVFFRVFKPAAGDKPVVL 523
+TAVFFRVFK G V++
Sbjct: 9 KTAVFFRVFKDGYGKPLVLM 68
>gb|BF258913.2|BF258913 HVSMEf0017A16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0017A16f, mRNA sequence
Length = 803
Score = 91.8 bits (194), Expect(4) = 3e-056
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -1 / +1
Query: 1848 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGN 1726
R+ YHFQP KNW NDPN PMY+ G YHFFYQYNP G WGN
Sbjct: 157 RSAYHFQPAKNWQNDPNGPMYHNGLYHFFYQYNPDGVTWGN 279
Score = 80.3 bits (169), Expect(4) = 3e-056
Identities = 32/48 (66%), Positives = 35/48 (72%)
Frame = -1 / +1
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRG 1402
QV+NVAYPKN SDPLL EWVKP +NPVI I FRDP+TAW G
Sbjct: 457 QVQNVAYPKNASDPLLVEWVKPEYNPVIPVPADIKRDDFRDPSTAWLG 600
Score = 80.3 bits (169), Expect(4) = 3e-056
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -1 / +1
Query: 1731 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
GN+ W HSVS DL+NW AL+ AL PS D GCWSGSAT+LPDG
Sbjct: 280 GNLSWGHSVSLDLVNWFALDTALEPSRSFDANGCWSGSATILPDG 414
Score = 70.7 bits (148), Expect(3) = 7e-037
Identities = 26/36 (72%), Positives = 27/36 (75%)
Frame = +2 / -1
Query: 1730 PHTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKW 1837
PH P GLYW*KKWY+PL YMG LGS QFL G KW
Sbjct: 275 PHVTPSGLYW*KKWYNPLWYMGPLGSFCQFLAG*KW 168
Score = 63.8 bits (133), Expect(3) = 7e-037
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 1732
PSG VA+PDQQP S LG SA SSA Q RSR+TEC H LP
Sbjct: 413 PSGRMVAEPDQQPLASNDRLGSSAVSSANQFTRSRETECPHDRLP 279
Score = 59.3 bits (123), Expect(3) = 7e-037
Identities = 27/48 (56%), Positives = 28/48 (58%)
Frame = +2 / -1
Query: 1403 PRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW 1546
P AV GSR LM MTGL GFTHS SGS+ F G ATF TW
Sbjct: 599 PSHAVEGSRKSSRLMSAGTGMTGLYSGFTHSTRSGSEAFLG*ATFWTW 456
Score = 24.4 bits (47), Expect(4) = 3e-056
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVD 1564
G PV++YTG+D
Sbjct: 412 GSPVMLYTGID 444
>gb|BQ471962.1|BQ471962 HV04A04r HV Hordeum vulgare subsp. vulgare cDNA clone HV04A04
5-PRIME, mRNA sequence
Length = 460
Score = 91.8 bits (194), Expect(4) = 3e-056
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -1 / +1
Query: 1848 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGN 1726
R+ YHFQP KNW NDPN PMY+ G YHFFYQYNP G WGN
Sbjct: 13 RSAYHFQPAKNWQNDPNGPMYHNGLYHFFYQYNPDGVTWGN 135
Score = 80.3 bits (169), Expect(4) = 3e-056
Identities = 32/48 (66%), Positives = 35/48 (72%)
Frame = -1 / +1
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRG 1402
QV+NVAYPKN SDPLL EWVKP +NPVI I FRDP+TAW G
Sbjct: 313 QVQNVAYPKNASDPLLVEWVKPEYNPVIPVPADIKRDDFRDPSTAWLG 456
Score = 80.3 bits (169), Expect(4) = 3e-056
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -1 / +1
Query: 1731 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
GN+ W HSVS DL+NW AL+ AL PS D GCWSGSAT+LPDG
Sbjct: 136 GNLSWGHSVSLDLVNWFALDTALEPSRSFDANGCWSGSATILPDG 270
Score = 77.6 bits (163), Expect(3) = 6e-039
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = +2 / -3
Query: 1730 PHTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKW 1837
PH P GLYW*KKWY+PL YMG LGS QFL GWKW
Sbjct: 131 PHVTPSGLYW*KKWYNPLWYMGPLGSFCQFLAGWKW 24
Score = 63.8 bits (133), Expect(3) = 6e-039
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 1732
PSG VA+PDQQP S LG SA SSA Q RSR+TEC H LP
Sbjct: 269 PSGRMVAEPDQQPLASNDRLGSSAVSSANQFTRSRETECPHDRLP 135
Score = 59.3 bits (123), Expect(3) = 6e-039
Identities = 27/48 (56%), Positives = 28/48 (58%)
Frame = +2 / -3
Query: 1403 PRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW 1546
P AV GSR LM MTGL GFTHS SGS+ F G ATF TW
Sbjct: 455 PSHAVEGSRKSSRLMSAGTGMTGLYSGFTHSTRSGSEAFLG*ATFWTW 312
Score = 24.4 bits (47), Expect(4) = 3e-056
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVD 1564
G PV++YTG+D
Sbjct: 268 GSPVMLYTGID 300
>gb|BQ768116.1|BQ768116 EBro08_SQ010_A24_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_A24 5', mRNA sequence
Length = 642
Score = 91.8 bits (194), Expect(4) = 1e-055
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -1 / +1
Query: 1848 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGN 1726
R+ YHFQP KNW NDPN PMY+ G YHFFYQYNP G WGN
Sbjct: 202 RSAYHFQPAKNWQNDPNGPMYHNGLYHFFYQYNPDGVTWGN 324
Score = 80.3 bits (169), Expect(4) = 1e-055
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -1 / +1
Query: 1731 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
GN+ W HSVS DL+NW AL+ AL PS D GCWSGSAT+LPDG
Sbjct: 325 GNLSWGHSVSLDLVNWFALDTALEPSRSFDANGCWSGSATILPDG 459
Score = 78.5 bits (165), Expect(4) = 1e-055
Identities = 31/46 (67%), Positives = 34/46 (73%)
Frame = -1 / +1
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAW 1408
QV+NVAYPKN SDPLL EWVKP +NPVI I FRDP+TAW
Sbjct: 502 QVQNVAYPKNASDPLLVEWVKPEYNPVIPVPADIKRDDFRDPSTAW 639
Score = 77.6 bits (163), Expect(3) = 4e-038
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = +2 / -2
Query: 1730 PHTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKW 1837
PH P GLYW*KKWY+PL YMG LGS QFL GWKW
Sbjct: 320 PHVTPSGLYW*KKWYNPLWYMGPLGSFCQFLAGWKW 213
Score = 63.8 bits (133), Expect(3) = 4e-038
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 1732
PSG VA+PDQQP S LG SA SSA Q RSR+TEC H LP
Sbjct: 458 PSGRMVAEPDQQPLASNDRLGSSAVSSANQFTRSRETECPHDRLP 324
Score = 56.5 bits (117), Expect(3) = 4e-038
Identities = 26/45 (57%), Positives = 27/45 (60%)
Frame = +2 / -2
Query: 1412 AVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW 1546
AV GSR LM MTGL GFTHS SGS+ F G ATF TW
Sbjct: 635 AVEGSRKSSRLMSAGTGMTGLYSGFTHSTRSGSEAFLG*ATFWTW 501
Score = 24.4 bits (47), Expect(4) = 1e-055
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1 / +1
Query: 1596 GGPVIMYTGVD 1564
G PV++YTG+D
Sbjct: 457 GSPVMLYTGID 489
>gb|BE558756.2|BE558756 HV_CEb0020F02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020F02f, mRNA sequence
Length = 799
Score = 80.3 bits (169), Expect(6) = 3e-054
Identities = 32/48 (66%), Positives = 35/48 (72%)
Frame = -1 / +2
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRG 1402
QV+NVAYPKN SDPLL EWVKP +NPVI I FRDP+TAW G
Sbjct: 248 QVQNVAYPKNASDPLLVEWVKPEYNPVIPVPADIKRDDFRDPSTAWLG 391
Score = 80.3 bits (169), Expect(6) = 3e-054
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -1 / +2
Query: 1731 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
GN+ W HSVS DL+NW AL+ AL PS D GCWSGSAT+LPDG
Sbjct: 71 GNLSWGHSVSLDLVNWFALDTALEPSRSFDANGCWSGSATILPDG 205
Score = 63.8 bits (133), Expect(3) = 8e-031
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 1732
PSG VA+PDQQP S LG SA SSA Q RSR+TEC H LP
Sbjct: 204 PSGRMVAEPDQQPLASNDRLGSSAVSSANQFTRSRETECPHDRLP 70
Score = 59.3 bits (123), Expect(3) = 8e-031
Identities = 27/48 (56%), Positives = 28/48 (58%)
Frame = +2 / -2
Query: 1403 PRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW 1546
P AV GSR LM MTGL GFTHS SGS+ F G ATF TW
Sbjct: 390 PSHAVEGSRKSSRLMSAGTGMTGLYSGFTHSTRSGSEAFLG*ATFWTW 247
Score = 54.2 bits (112), Expect(6) = 3e-054
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -1 / +2
Query: 1794 PMYYKGWYHFFYQYNPKGAVWGN 1726
PMY+ G YHFFYQYNP G WGN
Sbjct: 2 PMYHNGLYHFFYQYNPDGVTWGN 70
Score = 50.1 bits (103), Expect(3) = 8e-031
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +2 / -2
Query: 1730 PHTAPLGLYW*KKWYHPL*YMG 1795
PH P GLYW*KKWY+PL YMG
Sbjct: 66 PHVTPSGLYW*KKWYNPLWYMG 1
Score = 47.3 bits (97), Expect(6) = 3e-054
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = -1 / +2
Query: 1182 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDP 1003
G +HVLK S+ DYY V Y A+ +P+D R D+ YAS +F++P
Sbjct: 593 GAXARHVLKMSVMDTVQDYYVVRRYDDTADNLLPEDDGDWXSWRRLDFRQLYASNSFWNP 772
Query: 1002 AKRRRIL 982
+ +L
Sbjct: 773 TRPGALL 793
Score = 29.5 bits (58), Expect(6) = 3e-054
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1 / +2
Query: 1263 GMWECPDFYPVSKGG 1219
GM ECPD +PVS+ G
Sbjct: 524 GMVECPDLFPVSEPG 568
Score = 24.4 bits (47), Expect(6) = 3e-054
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVD 1564
G PV++YTG+D
Sbjct: 203 GSPVMLYTGID 235
>gb|BF065803.2|BF065803 HV_CEb0014A16f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014A16f, mRNA sequence
Length = 920
Score = 130 bits (279), Expect(4) = 5e-053
Identities = 49/98 (50%), Positives = 65/98 (66%)
Frame = -1 / +3
Query: 1182 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDP 1003
G +HVLK S+ DYY VG Y A+ +VP+D R DYG+ YASK+F+DP
Sbjct: 378 GAGARHVLKMSVMDTVQDYYVVGRYDDTADTFVPEDDGDCRSWRRLDYGHVYASKSFFDP 557
Query: 1002 AKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLD 889
+K RR+LWGWANESD+ ADD+ KGW+G+Q + W+D
Sbjct: 558 SKNRRVLWGWANESDSLADDLGKGWSGVQTVSEKKWVD 671
Score = 80.3 bits (169), Expect(4) = 5e-053
Identities = 32/48 (66%), Positives = 35/48 (72%)
Frame = -1 / +3
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRG 1402
QV+NVAYPKN SDPLL EWVKP +NPVI I FRDP+TAW G
Sbjct: 33 QVQNVAYPKNASDPLLVEWVKPEYNPVIPVPADIKRDDFRDPSTAWLG 176
Score = 35.0 bits (70), Expect(4) = 5e-053
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1 / +2
Query: 879 KQLLQWPIEEVEALRAK 829
KQL QWPIEE+E LR K
Sbjct: 680 KQLAQWPIEEIETLRNK 730
Score = 29.5 bits (58), Expect(4) = 5e-053
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1 / +3
Query: 1263 GMWECPDFYPVSKGG 1219
GM ECPD +PVS+ G
Sbjct: 309 GMVECPDLFPVSEPG 353
>gb|BU995607.1|BU995607 HM10M18r HM Hordeum vulgare subsp. vulgare cDNA clone HM10M18
5-PRIME, mRNA sequence
Length = 625
Score = 80.3 bits (169), Expect(5) = 8e-053
Identities = 32/48 (66%), Positives = 35/48 (72%)
Frame = -1 / +2
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRG 1402
QV+NVAYPKN SDPLL EWVKP +NPVI I FRDP+TAW G
Sbjct: 281 QVQNVAYPKNASDPLLVEWVKPEYNPVIPVPADIKRDDFRDPSTAWLG 424
Score = 80.3 bits (169), Expect(5) = 8e-053
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -1 / +2
Query: 1731 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
GN+ W HSVS DL+NW AL+ AL PS D GCWSGSAT+LPDG
Sbjct: 104 GNLSWGHSVSLDLVNWFALDTALEPSRSFDANGCWSGSATILPDG 238
Score = 77.1 bits (162), Expect(5) = 8e-053
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = -1 / +2
Query: 1827 PPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGN 1726
P KNW NDPN PMY+ G YHFFYQYNP G WGN
Sbjct: 2 PAKNWQNDPNGPMYHNGLYHFFYQYNPDGVTWGN 103
Score = 65.2 bits (136), Expect(3) = 3e-035
Identities = 24/33 (72%), Positives = 25/33 (75%)
Frame = +2 / -2
Query: 1730 PHTAPLGLYW*KKWYHPL*YMGALGSLIQFLGG 1828
PH P GLYW*KKWY+PL YMG LGS QFL G
Sbjct: 99 PHVTPSGLYW*KKWYNPLWYMGPLGSFCQFLAG 1
Score = 63.8 bits (133), Expect(3) = 3e-035
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 1732
PSG VA+PDQQP S LG SA SSA Q RSR+TEC H LP
Sbjct: 237 PSGRMVAEPDQQPLASNDRLGSSAVSSANQFTRSRETECPHDRLP 103
Score = 59.3 bits (123), Expect(3) = 3e-035
Identities = 27/48 (56%), Positives = 28/48 (58%)
Frame = +2 / -2
Query: 1403 PRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW 1546
P AV GSR LM MTGL GFTHS SGS+ F G ATF TW
Sbjct: 423 PSHAVEGSRKSSRLMSAGTGMTGLYSGFTHSTRSGSEAFLG*ATFWTW 280
Score = 29.5 bits (58), Expect(5) = 8e-053
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1 / +2
Query: 1263 GMWECPDFYPVSKGG 1219
GM ECPD +PVS+ G
Sbjct: 557 GMVECPDLFPVSEPG 601
Score = 24.4 bits (47), Expect(5) = 8e-053
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVD 1564
G PV++YTG+D
Sbjct: 236 GSPVMLYTGID 268
>gb|BQ468711.1|BQ468711 HM02B12r HM Hordeum vulgare subsp. vulgare cDNA clone HM02B12
5-PRIME, mRNA sequence
Length = 528
Score = 208 bits (449), Expect = 8e-053
Identities = 83/104 (79%), Positives = 96/104 (92%)
Frame = -1 / +3
Query: 549 AAGDKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGK 370
+ +KPVVLMC+DPT SSLNPNLY+PTFAGFVDTDI+ GKISLRSLIDRSVVESFGAGG+
Sbjct: 15 STNNKPVVLMCSDPTMSSLNPNLYKPTFAGFVDTDIAKGKISLRSLIDRSVVESFGAGGR 194
Query: 369 TCILSRVYPSLAIGKDARLYVFNNGRAHVKVSRLTAWEMKKPVM 238
TCILSRVYP+LA+GK+ARL+VFNNG+ +KVS LTAWEMKKP +
Sbjct: 195 TCILSRVYPTLALGKNARLHVFNNGKVDIKVSELTAWEMKKPAL 326
Score = 177 bits (382), Expect = 1e-043
Identities = 80/98 (81%), Positives = 81/98 (82%)
Frame = +2 / -3
Query: 245 GFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRSIRLLR 424
GFFISHAV DTL LPLL T*RRA LP AS G*T ERMQVLPPAPKLSTTDRSIRLLR
Sbjct: 319 GFFISHAVSSDTLMSTLPLLKT*RRAFLPSASVG*TRERMQVLPPAPKLSTTDRSIRLLR 140
Query: 425 DILPFEMSVSTNPANVGRYRFGFRDDLVGSVHMSTTGL 538
DILP MSVST PA VG YRFGFRDD+VGS HM TTGL
Sbjct: 139 DILPLAMSVSTKPAKVGLYRFGFRDDMVGSEHMRTTGL 26
Score = 114 bits (243), Expect = 2e-024
Identities = 50/77 (64%), Positives = 56/77 (72%)
Frame = -3 / +2
Query: 472 DICRICRHGHLERQDIPEKPDRPVGR*ELRSRGQDLHPLQGLPVAGHRQGRSPLRVQQRE 293
D+ R+C H H + QDI EKPDR V R ELR RGQDLHPL GLP A Q RSP R+QQR+
Sbjct: 92 DLRRLC*H*HSQGQDISEKPDRSVRRGELRGRGQDLHPLPGLPDARAGQERSPSRLQQRQ 271
Query: 292 GARQGVPSHRVGDEEAG 242
G QGV +H VGDEEAG
Sbjct: 272 GGHQGVGAHGVGDEEAG 322
Score = 110 bits (235), Expect = 3e-023
Identities = 50/75 (66%), Positives = 58/75 (77%)
Frame = +1 / -2
Query: 244 RLLHLPRGETGHLDVRPPVVEHVEASVLADGQRRVDPGEDAGLAPGSEALNDRPVDQASQ 423
RLLHLPR E HLDV VVE V+ASVLA +RRVDPGEDAG AP EAL+D P+DQASQ
Sbjct: 320 RLLHLPRRELRHLDVHLAVVEDVKASVLAQRERRVDPGEDAGPAPCPEALHDGPIDQASQ 141
Query: 424 GYLAVRDVRVDKSCK 468
YLA+ V V+K+C+
Sbjct: 140 RYLALGYVSVNKACE 96
>gb|CA019964.1|CA019964 HV13O24r HV Hordeum vulgare subsp. vulgare cDNA clone HV13O24
5-PRIME, mRNA sequence
Length = 541
Score = 152 bits (327), Expect(3) = 3e-052
Identities = 55/101 (54%), Positives = 70/101 (69%)
Frame = -1 / +2
Query: 1872 PSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNIVWAHSVSRDL 1693
PS + + +T +HFQP KNW+NDP+ PMY+ G YH FYQYN G ++G+IVW HSVS DL
Sbjct: 38 PSPASTMYKTAFHFQPAKNWMNDPSGPMYFNGIYHEFYQYNLNGPIFGDIVWGHSVSTDL 217
Query: 1692 INWVALEPALRPSIPGDRYGCWSGSATVLPDGGGPVIMYTG 1570
+NW+ LEPAL P D GCW+GS T+LP G +I G
Sbjct: 218 VNWIGLEPALVRDTPSDIDGCWTGSVTILPGGKPVIIYTGG 340
Score = 103 bits (220), Expect(3) = 5e-027
Identities = 48/92 (52%), Positives = 54/92 (58%)
Frame = +2 / -2
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLYW*KKWYH 1777
P G V +P QQP +S G+ +AGSS QL RS +TE TM P PL LYW* W
Sbjct: 312 PPGRMVTEPVQQPSMSLGVSRTNAGSSPIQLTRSVETEWPQTMSPKMGPLRLYW*NSW*M 133
Query: 1778 PL*YMGALGSLIQFLGGWKWYPVLSRGLTMDG 1873
PL Y+G GS IQFL GWKW VL L DG
Sbjct: 132 PLKYIGPDGSFIQFLAGWKWKAVLYMVLAGDG 37
Score = 55.1 bits (114), Expect(3) = 3e-052
Identities = 18/32 (56%), Positives = 27/32 (84%)
Frame = -1 / +2
Query: 1548 YQVRNVAYPKNVSDPLLREWVKPSHNPVIVPE 1453
+Q +N+A+PKN SDP LREW+K ++NPV+ P+
Sbjct: 353 HQTQNIAFPKNRSDPYLREWIKAANNPVLRPD 448
Score = 37.7 bits (76), Expect(3) = 3e-052
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1 / +2
Query: 1455 EGGINVTQFRDPTTAWRGP 1399
E G+NV +FRDPTT W GP
Sbjct: 449 EPGMNVIEFRDPTTGWIGP 505
Score = 32.7 bits (65), Expect(3) = 5e-027
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +2 / -2
Query: 1370 PTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATF 1537
PT+ C + V + + SG TGL HS GSD F G A F
Sbjct: 531 PTAILQCPSGPIQPVVGSLNSITFIPGSSGRSTGLLAALIHSLRYGSDRFLGNAMF 364
Score = 24.0 bits (46), Expect(3) = 5e-027
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / -2
Query: 1571 PVYMITGPPP 1600
PVYM+TG PP
Sbjct: 336 PVYMMTGLPP 307
>gb|BQ468810.1|BQ468810 HM02G15r HM Hordeum vulgare subsp. vulgare cDNA clone HM02G15
5-PRIME, mRNA sequence
Length = 529
Score = 179 bits (386), Expect(2) = 1e-051
Identities = 64/112 (57%), Positives = 90/112 (80%)
Frame = -1 / +2
Query: 1065 DEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDP 886
+++ LRYDYG+FYASK+FYDP K+RR+LWGWANESDT DD KGWAGIQAIPR ++L
Sbjct: 77 NDYGLRYDYGDFYASKSFYDPVKKRRVLWGWANESDTVPDDRQKGWAGIQAIPRKIFLSR 256
Query: 885 SGKQLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEV 730
G+QL+QWP+EE+++LRAK V + ++ +K G + +V G ++ Q+DVE +F +
Sbjct: 257 GGRQLIQWPVEEIKSLRAKHVNVSDKAVKGGEYFKVGGFKSVQSDVEAAFMI 412
Score = 94.1 bits (199), Expect(2) = 2e-021
Identities = 50/98 (51%), Positives = 54/98 (55%)
Frame = +2 / -2
Query: 746 STSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGIAWIP 925
STS C P T P L L L +T A + SS GH SC P + LGIAW+P
Sbjct: 396 STSDCTDLKPPTLKYSPPLTALSLTLTCLARNDLISSTGH*ISCLPPRDRNIFLGIAWMP 217
Query: 926 AQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLP 1039
AQP SS VSDSLAQP R RR GS*N DA*K P
Sbjct: 216 AQPFWRSSGTVSDSLAQPQRTRRFFTGS*NDFDA*KSP 103
Score = 45.1 bits (92), Expect(2) = 1e-051
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = -1 / +2
Query: 717 LAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWV 607
L AE D A DA+ LC + V+GGVGPFGLW+
Sbjct: 419 LEKAEKFDMAWRTDAQGLCKKLNSHVKGGVGPFGLWL 529
Score = 29.5 bits (58), Expect(2) = 2e-021
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / -2
Query: 614 SPNGPTPPLT 643
SPNGPTPPLT
Sbjct: 522 SPNGPTPPLT 493
>gb|BF256656.2|BF256656 HVSMEf0010J22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010J22f, mRNA sequence
Length = 846
Score = 102 bits (217), Expect(3) = 4e-051
Identities = 40/73 (54%), Positives = 51/73 (69%)
Frame = -1 / +3
Query: 948 DDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGI 769
DD+ +GW+G+Q +PR +WLD GKQL QWPIEE+E LR K V L + AG E+ GI
Sbjct: 3 DDLVRGWSGVQTVPRKIWLDEDGKQLRQWPIEEIETLRNKRVNLLIPEVNAGGVNEIIGI 182
Query: 768 QTAQADVEVSFEV 730
AQADVEV F++
Sbjct: 183 VGAQADVEVMFQI 221
Score = 101 bits (215), Expect(3) = 4e-051
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = -1 / +3
Query: 456 VDTDISNGKISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKV 277
+D + G ISLR+L+D SVVESFG GG+TCI +RVYP + ++ LYVFNNG VKV
Sbjct: 489 MDIEAQGGSISLRTLVDHSVVESFGGGGRTCITARVYPDHVVNGNSHLYVFNNGTGAVKV 668
Query: 276 SRLTAWEMKKPVMN 235
S L AWEM +N
Sbjct: 669 SSLYAWEMATATVN 710
Score = 73.9 bits (155), Expect(4) = 7e-038
Identities = 36/70 (51%), Positives = 40/70 (57%)
Frame = +2 / -3
Query: 740 LTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGIAW 919
+TSTSACA +P+ S PAL + R T LS S SSIGHC SC P SSH LG
Sbjct: 211 MTSTSACAPTMPMISFTPPALTSGISRFTRLFLSVSISSIGHCRSCLPSSSSHIFLGTV* 32
Query: 920 IPAQPLATSS 949
P PL SS
Sbjct: 31 TPDHPLTRSS 2
Score = 69.8 bits (146), Expect(4) = 9e-033
Identities = 32/68 (47%), Positives = 41/68 (60%)
Frame = -1 / +3
Query: 756 ADVEVSFEVSPAALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERT 577
A +V AL A+ L+P + + LCG K A V G VGPFGL V+AS + +E T
Sbjct: 189 AQADVEVMFQIPALEHADVLEPNWLLNPQSLCGEKGASVPGSVGPFGLLVMASGDMQEHT 368
Query: 576 AVFFRVFK 553
AVFFRVF+
Sbjct: 369 AVFFRVFR 392
Score = 65.2 bits (136), Expect(4) = 7e-038
Identities = 32/63 (50%), Positives = 37/63 (58%)
Frame = +1 / -2
Query: 235 VHDRLLHLPRGETGHLDVRPPVVEHVEASVLADGQRRVDPGEDAGLAPGSEALNDRPVDQ 414
VH R HLPR E GHLD VVEHV+ +V RV P DA A +EAL+ R VDQ
Sbjct: 710 VHGRGRHLPRVEAGHLDGAGAVVEHVQVAVAVHDVVRVHPRRDARPAAAAEALHHRVVDQ 531
Query: 415 ASQ 423
S+
Sbjct: 530 CSE 522
Score = 62.9 bits (131), Expect(4) = 9e-033
Identities = 30/73 (41%), Positives = 40/73 (54%)
Frame = -3 / +2
Query: 451 HGHLERQDIPEKPDRPVGR*ELRSRGQDLHPLQGLPVAGHRQGRSPLRVQQREGARQGVP 272
H Q + + RP+G ELR R QD+H +G+P + + P+RVQQR RQGV
Sbjct: 494 HRGARGQHLAQNTGRPLGGGELRRRRQDVHHGEGVPGPRRERQQPPVRVQQRHRRRQGVQ 673
Query: 271 SHRVGDEEAGHER 233
RVGD + ER
Sbjct: 674 PLRVGDGDRDRER 712
Score = 51.0 bits (105), Expect(4) = 7e-038
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = +2 / -3
Query: 554 LNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 664
LNT K TAV S EA T SPNGPT P T A F+PH
Sbjct: 391 LNTRKKTAVCSCMSPEAMTSSPNGPTLPGTDAPFSPH 281
Score = 45.1 bits (92), Expect(3) = 4e-051
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = -1 / +3
Query: 540 DKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDI 442
DK VLMCTD +KSS +Y+P + FVD DI
Sbjct: 399 DKYKVLMCTDLSKSSTRDGVYKPPYGAFVDMDI 497
Score = 32.7 bits (65), Expect(4) = 9e-033
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2 / +1
Query: 950 PTMWLKAGLESRRFQGRCGWTPVGSSCCSG 861
PT G R F+GR GWT SSC SG
Sbjct: 1 PTTSSGDGPVFRLFRGRYGWTKTASSCGSG 90
Score = 31.8 bits (63), Expect(4) = 9e-033
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2 / +1
Query: 527 CSCAPTLPSRP*TRTCTARHLQDLSTRTSR 438
CSCAPT SR CT+R T TSR
Sbjct: 412 CSCAPTSRSRAPETACTSRRTGPSWTWTSR 501
Score = 24.4 bits (47), Expect(4) = 7e-038
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +2 / -3
Query: 443 MSVSTNPANVGRYRFGFRDDLVGSVHMSTTGLS 541
MS+ST G Y D SVHMST LS
Sbjct: 496 MSMSTKAPYGGLYTPSLVLDFERSVHMSTLYLS 398
>gb|AV924542.1|AV924542 AV924542 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd14p15 5', mRNA sequence
Length = 602
Score = 199 bits (429), Expect = 5e-050
Identities = 80/151 (52%), Positives = 102/151 (67%)
Frame = -1 / +3
Query: 1182 GPRVKHVLKNSLDLRRYDYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDP 1003
G +HVLK S+ DYY VG Y A+ +VP+D R DYG+ YASK+F+DP
Sbjct: 75 GAGARHVLKMSVMDTVQDYYVVGRYDDTADTFVPEDDGDCRSWRRLDYGHVYASKSFFDP 254
Query: 1002 AKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSV 823
+K RR+LWGWANESD+ ADD+ +GW+G+Q +PR +WLD GKQL QWPIEE+E LR K V
Sbjct: 255 SKNRRVLWGWANESDSLADDLVRGWSGVQTVPRKIWLDEDGKQLRQWPIEEIETLRNKRV 434
Query: 822 TLRNRVIKAGHHVEVTGIQTAQADVEVSFEV 730
L + AG E+ GI AQADVEV F++
Sbjct: 435 NLLIPEVNAGGVNEIIGIVGAQADVEVMFQI 527
Score = 116 bits (248), Expect = 4e-025
Identities = 67/148 (45%), Positives = 73/148 (49%)
Frame = +2 / -2
Query: 740 LTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGIAW 919
+TSTSACA +P+ S PAL + R T LS S SSIGHC SC P SSH LG
Sbjct: 517 MTSTSACAPTMPMISFTPPALTSGISRFTRLFLSVSISSIGHCRSCLPSSSSHIFLGTV* 338
Query: 920 IPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLPXXXXXXXXXPAGSSGTYRSA 1099
P PL SSA +SDSLAQP RR L GS LDA P SSGT SA
Sbjct: 337 TPDHPLTRSSARLSDSLAQPQSTRRFLLGSKKDLDAYTWP*SRRRQLRQSPSSSGTKVSA 158
Query: 1100 LGWYVPTVXXXXXXXXXLFLSTCLTLGP 1183
+ PT L STCL P
Sbjct: 157 VSS*RPTT**SWTVSITLIFSTCLAPAP 74
>gb|BF627833.2|BF627833 HVSMEb0005O19f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0005O19f, mRNA sequence
Length = 816
Score = 91.8 bits (194), Expect(4) = 6e-050
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -1 / +2
Query: 1848 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGN 1726
R+ YHFQP KNW NDPN PMY+ G YHFFYQYNP G WGN
Sbjct: 197 RSAYHFQPAKNWQNDPNGPMYHNGLYHFFYQYNPDGVTWGN 319
Score = 80.3 bits (169), Expect(4) = 6e-050
Identities = 30/45 (66%), Positives = 34/45 (75%)
Frame = -1 / +2
Query: 1731 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
GN+ W HSVS DL+NW AL+ AL PS D GCWSGSAT+LPDG
Sbjct: 320 GNLSWGHSVSLDLVNWFALDTALEPSRSFDANGCWSGSATILPDG 454
Score = 70.7 bits (148), Expect(3) = 2e-034
Identities = 26/36 (72%), Positives = 27/36 (75%)
Frame = +2 / -1
Query: 1730 PHTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKW 1837
PH P GLYW*KKWY+PL YMG LGS QFL G KW
Sbjct: 315 PHVTPSGLYW*KKWYNPLWYMGPLGSFCQFLAG*KW 208
Score = 63.8 bits (133), Expect(3) = 2e-034
Identities = 28/45 (62%), Positives = 30/45 (66%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 1732
PSG VA+PDQQP S LG SA SSA Q RSR+TEC H LP
Sbjct: 453 PSGRMVAEPDQQPLASNDRLGSSAVSSANQFTRSRETECPHDRLP 319
Score = 59.3 bits (123), Expect(4) = 6e-050
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = -1 / +2
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTA 1411
QV+NV+YPKN DPLL EWVKP NP + I +RDP TA
Sbjct: 497 QVQNVSYPKNACDPLLVEWVKPECNPGMPVPADIKRDDWRDPGTA 631
Score = 51.0 bits (105), Expect(3) = 2e-034
Identities = 24/48 (50%), Positives = 25/48 (52%)
Frame = +2 / -1
Query: 1403 PRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW 1546
P AV GSR LM + GL GFTHS SGS F G TF TW
Sbjct: 639 PSHAVPGSRQSSRLMSAGTGIPGLHSGFTHSTRSGSQAFLG*LTFWTW 496
Score = 24.4 bits (47), Expect(4) = 6e-050
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1 / +2
Query: 1596 GGPVIMYTGVD 1564
G PV++YTG+D
Sbjct: 452 GSPVMLYTGID 484
>gb|AV923014.1|AV923014 AV923014 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd3f20 5', mRNA sequence
Length = 649
Score = 191 bits (412), Expect = 1e-047
Identities = 74/134 (55%), Positives = 94/134 (70%)
Frame = -1 / +1
Query: 1131 DYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTA 952
DYY VG Y A+ +VP+D R DYG+ YASK+F+DP+K RR+LWGWANESD+
Sbjct: 16 DYYVVGRYDDTADTFVPEDDGDCRSWRRLDYGHVYASKSFFDPSKNRRVLWGWANESDSL 195
Query: 951 ADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTG 772
ADD+ +GW+G+Q +PR +WLD GKQL QWPIEE+E LR K V L + AG E+ G
Sbjct: 196 ADDLVRGWSGVQTVPRKIWLDEDGKQLRQWPIEEIETLRNKRVNLLIPEVNAGGVNEIIG 375
Query: 771 IQTAQADVEVSFEV 730
I AQADVEV F++
Sbjct: 376 IVGAQADVEVMFQI 417
Score = 108 bits (230), Expect(2) = 3e-028
Identities = 61/127 (48%), Positives = 67/127 (52%)
Frame = +2 / -3
Query: 740 LTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGIAW 919
+TSTSACA +P+ S PAL + R T LS S SSIGHC SC P SSH LG
Sbjct: 407 MTSTSACAPTMPMISFTPPALTSGISRFTRLFLSVSISSIGHCRSCLPSSSSHIFLGTV* 228
Query: 920 IPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLPXXXXXXXXXPAGSSGTYRSA 1099
P PL SSA +SDSLAQP RR L GS LDA P SSGT SA
Sbjct: 227 TPDHPLTRSSARLSDSLAQPQSTRRFLLGSKKDLDAYTWP*SRRRQLRQSPSSSGTKVSA 48
Query: 1100 LGWYVPT 1120
+ PT
Sbjct: 47 VSS*RPT 27
Score = 38.6 bits (78), Expect(2) = 3e-028
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = +2 / -3
Query: 578 VLSLRLAEASTHSPNGPTPPLTSARFTPH 664
V S EA T SPNGPT P T A F+PH
Sbjct: 563 VCSCMSPEAMTSSPNGPTLPGTDAPFSPH 477
>gb|AV926810.1|AV926810 AV926810 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd23n16 5', mRNA sequence
Length = 623
Score = 191 bits (412), Expect = 1e-047
Identities = 74/134 (55%), Positives = 94/134 (70%)
Frame = -1 / +3
Query: 1131 DYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTA 952
DYY VG Y A+ +VP+D R DYG+ YASK+F+DP+K RR+LWGWANESD+
Sbjct: 15 DYYVVGRYDDTADTFVPEDDGDCRSWRRLDYGHVYASKSFFDPSKNRRVLWGWANESDSL 194
Query: 951 ADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTG 772
ADD+ +GW+G+Q +PR +WLD GKQL QWPIEE+E LR K V L + AG E+ G
Sbjct: 195 ADDLVRGWSGVQTVPRKIWLDEDGKQLRQWPIEEIETLRNKRVNLLIPEVNAGGVNEIIG 374
Query: 771 IQTAQADVEVSFEV 730
I AQADVEV F++
Sbjct: 375 IVGAQADVEVMFQI 416
Score = 108 bits (230), Expect(2) = 5e-032
Identities = 61/127 (48%), Positives = 67/127 (52%)
Frame = +2 / -2
Query: 740 LTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGIAW 919
+TSTSACA +P+ S PAL + R T LS S SSIGHC SC P SSH LG
Sbjct: 406 MTSTSACAPTMPMISFTPPALTSGISRFTRLFLSVSISSIGHCRSCLPSSSSHIFLGTV* 227
Query: 920 IPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLPXXXXXXXXXPAGSSGTYRSA 1099
P PL SSA +SDSLAQP RR L GS LDA P SSGT SA
Sbjct: 226 TPDHPLTRSSARLSDSLAQPQSTRRFLLGSKKDLDAYTWP*SRRRQLRQSPSSSGTKVSA 47
Query: 1100 LGWYVPT 1120
+ PT
Sbjct: 46 VSS*RPT 26
Score = 51.0 bits (105), Expect(2) = 5e-032
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = +2 / -2
Query: 554 LNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 664
LNT K TAV S EA T SPNGPT P T A F+PH
Sbjct: 586 LNTRKKTAVCSCMSPEAMTSSPNGPTLPGTDAPFSPH 476
>gb|BQ463718.1|BQ463718 HG01D14r HG Hordeum vulgare subsp. vulgare cDNA clone HG01D14
5-PRIME, mRNA sequence
Length = 487
Score = 191 bits (412), Expect = 1e-047
Identities = 74/134 (55%), Positives = 94/134 (70%)
Frame = -1 / +2
Query: 1131 DYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTA 952
DYY VG Y A+ +VP+D R DYG+ YASK+F+DP+K RR+LWGWANESD+
Sbjct: 41 DYYVVGRYDDTADTFVPEDDGDCRSWRRLDYGHVYASKSFFDPSKNRRVLWGWANESDSL 220
Query: 951 ADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTG 772
ADD+ +GW+G+Q +PR +WLD GKQL QWPIEE+E LR K V L + AG E+ G
Sbjct: 221 ADDLVRGWSGVQTVPRKIWLDEDGKQLRQWPIEEIETLRNKRVNLLIPEVNAGGVNEIIG 400
Query: 771 IQTAQADVEVSFEV 730
I AQADVEV F++
Sbjct: 401 IVGAQADVEVMFQI 442
Score = 108 bits (230), Expect = 1e-022
Identities = 61/127 (48%), Positives = 67/127 (52%)
Frame = +2 / -2
Query: 740 LTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGIAW 919
+TSTSACA +P+ S PAL + R T LS S SSIGHC SC P SSH LG
Sbjct: 432 MTSTSACAPTMPMISFTPPALTSGISRFTRLFLSVSISSIGHCRSCLPSSSSHIFLGTV* 253
Query: 920 IPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLPXXXXXXXXXPAGSSGTYRSA 1099
P PL SSA +SDSLAQP RR L GS LDA P SSGT SA
Sbjct: 252 TPDHPLTRSSARLSDSLAQPQSTRRFLLGSKKDLDAYTWP*SRRRQLRQSPSSSGTKVSA 73
Query: 1100 LGWYVPT 1120
+ PT
Sbjct: 72 VSS*RPT 52
>gb|AL505127.1|AL505127 AL505127 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07H17V 5', mRNA sequence
Length = 650
Score = 189 bits (408), Expect = 4e-047
Identities = 73/134 (54%), Positives = 93/134 (69%)
Frame = -1 / +1
Query: 1131 DYYTVGTYHPRAERYVPDDPAGDEHRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTA 952
DYY VG Y + +VP+D R DYG+ YASK+F+DP+K RR+LWGWANESD+
Sbjct: 4 DYYVVGRYDDTXDTFVPEDDGDCRSWRRLDYGHVYASKSFFDPSKNRRVLWGWANESDSL 183
Query: 951 ADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTG 772
ADD+ +GW+G+Q +PR +WLD GKQL QWPIEE+E LR K V L + AG E+ G
Sbjct: 184 ADDLVRGWSGVQTVPRKIWLDEDGKQLRQWPIEEIETLRNKRVNLLIPEVNAGGVNEIIG 363
Query: 771 IQTAQADVEVSFEV 730
I AQADVEV F++
Sbjct: 364 IVGAQADVEVMFQI 405
Score = 106 bits (226), Expect(2) = 2e-031
Identities = 60/127 (47%), Positives = 66/127 (51%)
Frame = +2 / -1
Query: 740 LTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSHTVLGIAW 919
+TSTSACA +P+ S PAL + R T LS S SSIGHC SC P SSH LG
Sbjct: 395 MTSTSACAPTMPMISFTPPALTSGISRFTRLFLSVSISSIGHCRSCLPSSSSHIFLGTV* 216
Query: 920 IPAQPLATSSAAVSDSLAQPHRMRRRLAGS*NVLDA*KLPXXXXXXXXXPAGSSGTYRSA 1099
P PL SSA +SDSLAQP RR L GS LDA P SSGT S
Sbjct: 215 TPDHPLTRSSARLSDSLAQPQSTRRFLLGSKKDLDAYTWP*SRRRQLRQSPSSSGTKVSX 36
Query: 1100 LGWYVPT 1120
+ PT
Sbjct: 35 VSS*RPT 15
Score = 51.0 bits (105), Expect(2) = 2e-031
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = +2 / -1
Query: 554 LNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 664
LNT K TAV S EA T SPNGPT P T A F+PH
Sbjct: 575 LNTRKKTAVCSCMSPEAMTSSPNGPTLPGTDAPFSPH 465
>gb|BF254630.1|BF254630 HVSMEf0004I24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0004I24f, mRNA sequence
Length = 899
Score = 88.1 bits (186), Expect(4) = 4e-047
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = -1 / +1
Query: 1848 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGN 1726
RT YHFQP K W NDPN P+Y+ G YHFFYQYNP GA WG+
Sbjct: 118 RTAYHFQPAKFWQNDPNGPLYHNGMYHFFYQYNPHGATWGD 240
Score = 70.7 bits (148), Expect(4) = 4e-047
Identities = 27/45 (60%), Positives = 31/45 (68%)
Frame = -1 / +1
Query: 1731 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
G + W HSVS DL+NW + AL P+ P D GCWSGSATVLP G
Sbjct: 241 GTLSWGHSVSGDLVNWADVGNALDPTSPFDANGCWSGSATVLPGG 375
Score = 67.5 bits (141), Expect(3) = 3e-027
Identities = 25/36 (69%), Positives = 25/36 (69%)
Frame = +2 / -1
Query: 1730 PHTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKW 1837
P AP GLYW*KKWY PL Y G LGS Q L GWKW
Sbjct: 236 PQVAPWGLYW*KKWYMPLWYSGPLGSFCQNLAGWKW 129
Score = 61.1 bits (127), Expect(4) = 4e-047
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = -1 / +1
Query: 1545 QVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPT 1417
QV+NVA+ KN +DPLLREW KP+ NPV+ + FRDPT
Sbjct: 418 QVQNVAFAKNPADPLLREWEKPNCNPVMPMPADVTGNNFRDPT 546
Score = 50.6 bits (104), Expect(3) = 3e-027
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 1732
P GSTVA+PDQ P S G +G SA ++ Q RS +TE H +P
Sbjct: 374 PPGSTVAEPDQHPLASNGEVGSSALPTSAQFTRSPETEWPHESVP 240
Score = 42.8 bits (87), Expect(3) = 3e-027
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +2 / -1
Query: 1415 VVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATFRTW*LMS 1558
+VGSR + + MTGL GF+HSR SGS F ATF T L++
Sbjct: 548 LVGSRKLLPVTSAGMGMTGLQLGFSHSRRSGSAGFLAKATFCTCTLLA 405
Score = 26.3 bits (51), Expect(4) = 4e-047
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1 / +1
Query: 1599 GGGPVIMYTGVDHPDINYQ 1543
GG P I+YTG+D + Q
Sbjct: 370 GGRPAILYTGIDANRVQVQ 426
>gb|CB882214.1|CB882214 HL01D13w HL Hordeum vulgare subsp. vulgare cDNA clone HL01D13
3-PRIME, mRNA sequence
Length = 624
Score = 152 bits (327), Expect(2) = 9e-047
Identities = 61/110 (55%), Positives = 78/110 (70%)
Frame = -1 / +3
Query: 1731 GNIVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDGGGPVIMYTGVDHPDI 1552
GN+ W HSVSRDL+NW AL+ AL P+ P D GCWSGSAT+LP G ++ ++ +
Sbjct: 159 GNLSWGHSVSRDLVNWDALDTALDPTAPFDSDGCWSGSATILPGGIPALLYTGRINATNK 338
Query: 1551 NYQVRNVAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRG 1402
QV+NVA+PKN +DPLLREWVKP++NPVI + +FRDPTTAW G
Sbjct: 339 EVQVQNVAFPKNPADPLLREWVKPAYNPVIPLPADVPGDKFRDPTTAWVG 488
Score = 58.8 bits (122), Expect(3) = 3e-025
Identities = 31/62 (50%), Positives = 33/62 (53%)
Frame = +2 / -3
Query: 1358 PAALPTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGSDTFFGYATF 1537
P L ++ P QAVVGSRN MTGL GFTHSRSSGS F G ATF
Sbjct: 532 PPTLAATAMRHRPSRPTQAVVGSRNLSPGTSAGSGMTGL*AGFTHSRSSGSAGFLGKATF 353
Query: 1538 RT 1543
T
Sbjct: 352 CT 347
Score = 56.5 bits (117), Expect(3) = 3e-025
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +2 / -3
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLP 1732
P G VA+PDQQP S G +G SA S A+QL RSR+TE H LP
Sbjct: 292 PPGRMVAEPDQQPSESKGAVGSSAVSRASQLTRSRETE*PHERLP 158
Score = 56.1 bits (116), Expect(2) = 9e-047
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = -1 / +3
Query: 1806 DPNAPMYYKGWYHFFYQYNPKGAVW 1732
DPN PMY+ G YH FYQYNP GA+W
Sbjct: 78 DPNGPMYHNGVYHMFYQYNPLGAMW 152
Score = 39.1 bits (79), Expect(3) = 3e-025
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +2 / -3
Query: 1733 HTAPLGLYW*KKWYHPL*YMGALGS 1807
H AP GLYW* W PL Y+G GS
Sbjct: 151 HIAPSGLYW*NMW*TPLWYIGPFGS 77
>gb|BG301302.1|BG301302 HVSMEb0020J07f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0020J07f, mRNA sequence
Length = 913
Score = 86.8 bits (183), Expect(4) = 5e-046
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = -1 / +3
Query: 1848 RTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVW 1732
RTG+HFQP K + NDPN P+YY GWYH FYQYNP G+VW
Sbjct: 186 RTGFHFQPDKYYQNDPNGPVYYGGWYHLFYQYNPSGSVW 302
Score = 77.1 bits (162), Expect(4) = 5e-046
Identities = 30/56 (53%), Positives = 36/56 (64%)
Frame = -1 / +3
Query: 1533 VAYPKNVSDPLLREWVKPSHNPVIVPEGGINVTQFRDPTTAWRGPGPEQWRLLVGS 1366
+A P + SDPLLREWVK NPV+ P GI + FRDPTTAW WR ++GS
Sbjct: 495 LAEPADPSDPLLREWVKHPANPVVFPPTGIGMNDFRDPTTAWFDASDGTWRTIIGS 662
Score = 69.8 bits (146), Expect(3) = 1e-025
Identities = 26/38 (68%), Positives = 27/38 (71%)
Frame = +2 / -1
Query: 1733 HTAPLGLYW*KKWYHPL*YMGALGSLIQFLGGWKWYPV 1846
HT P GLYW* KWYHP *Y G LGS +L GWKW PV
Sbjct: 301 HTDPDGLYW*NKWYHPP*YTGPLGSFW*YLSGWKWKPV 188
Score = 56.5 bits (117), Expect(4) = 5e-046
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = -1 / +3
Query: 1725 IVWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
IVW H+VS+DLI+W L PAL P D G +GS TVLPDG
Sbjct: 312 IVWGHAVSKDLIHWRHLPPALVPDQWYDIKGVLTGSITVLPDG 440
Score = 46.4 bits (95), Expect(3) = 1e-025
Identities = 22/47 (46%), Positives = 22/47 (46%)
Frame = +2 / -1
Query: 1370 PTSSRHCSGPGPRQAVVGSRNCVTLMPPSGTMTGLCEGFTHSRSSGS 1510
P RH AVVGSR MP G TG FTHSR SGS
Sbjct: 658 PMMVRHVPSEASNHAVVGSRKSFIPMPVGGNTTGFAGCFTHSRRSGS 518
Score = 39.6 bits (80), Expect(3) = 1e-025
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +2 / -1
Query: 1598 PSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTM 1726
PSGSTV +P P +S G AG Q +RS DT HT+
Sbjct: 439 PSGSTVMEPVSTPLMSYHWSGTKAGGRWRQWIRSLDTAWPHTI 311
Score = 22.1 bits (42), Expect(4) = 5e-046
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1 / +3
Query: 1266 TGMWECPDFYPVSKG 1222
TG +EC D Y V G
Sbjct: 765 TGEYECIDLYAVXGG 809
>gb|AL503000.1|AL503000 AL503000 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09G14u 3', mRNA sequence
Length = 595
Score = 186 bits (400), Expect = 5e-046
Identities = 77/90 (85%), Positives = 83/90 (92%)
Frame = -1 / -3
Query: 495 LNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDAR 316
L P LY+PTFAGFVDTDIS+GKISLRSLIDRSVVESFGAGGKTCILSRVYPS+AIGKDA
Sbjct: 524 LTPGLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGKDAH 345
Query: 315 LYVFNNGRAHVKVSRLTAWEMKKPVMNGA* 226
LYVFNNG +KVS+L AWEMKKP+MNGA*
Sbjct: 344 LYVFNNGETDIKVSQLKAWEMKKPMMNGA* 255
Score = 146 bits (313), Expect = 5e-034
Identities = 65/89 (73%), Positives = 72/89 (80%)
Frame = +2 / +1
Query: 230 APFMTGFFISHAVRRDTLTCALPLLNT*RRASLPMASDG*TLERMQVLPPAPKLSTTDRS 409
APF+ GFFISHA+ DTL PLLNT*R AS P+A DG TLERMQV PPAPKLSTT+RS
Sbjct: 259 APFIMGFFISHALSWDTLISVSPLLNT*RCASFPIAMDGYTLERMQVFPPAPKLSTTERS 438
Query: 410 IRLLRDILPFEMSVSTNPANVGRYRFGFR 496
I+LL++I P EMSVSTNPANVG YR G R
Sbjct: 439 IKLLKEIFPDEMSVSTNPANVGLYRPGVR 525
>gb|BF260867.2|BF260867 HVSMEf0023C11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023C11f, mRNA sequence
Length = 750
Score = 101 bits (216), Expect(4) = 9e-046
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = -1 / +2
Query: 456 VDTDISNGKISLRSLIDRSVVESFGAGGKTCILSRVYPSLAIGKDARLYVFNNGRAHVKV 277
+D + G ISLR+L+D SVVESFG GG+TCI +RVYP + ++ LYVFNNG VKV
Sbjct: 443 MDIEAQGGSISLRTLVDHSVVESFGGGGRTCITARVYPDHVVNGNSHLYVFNNGTGAVKV 622
Query: 276 SRLTAWEMKKPVMN 235
S L AWEM +N
Sbjct: 623 SSLDAWEMATATVN 664
Score = 74.4 bits (156), Expect(3) = 3e-028
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = -1 / +2
Query: 900 VWLDPSGKQLLQWPIEEVEALRAKSVTLRNRVIKAGHHVEVTGIQTAQADVEVSFEV 730
+WLD GKQL QWPIEE+E LR K V L + AG E+ GI AQADVEV F++
Sbjct: 5 IWLDEDGKQLRQWPIEEIETLRNKRVNLLIPEVNAGGVNEIIGIVGAQADVEVMFQI 175
Score = 69.8 bits (146), Expect(4) = 9e-046
Identities = 32/68 (47%), Positives = 41/68 (60%)
Frame = -1 / +2
Query: 756 ADVEVSFEVSPAALAGAETLDPALAYDAERLCGVKRADVRGGVGPFGLWVLASANRKERT 577
A +V AL A+ L+P + + LCG K A V G VGPFGL V+AS + +E T
Sbjct: 143 AQADVEVMFQIPALEHADVLEPNWLLNPQSLCGEKGASVPGSVGPFGLLVMASGDMQEHT 322
Query: 576 AVFFRVFK 553
AVFFRVF+
Sbjct: 323 AVFFRVFR 346
Score = 66.1 bits (138), Expect(4) = 9e-035
Identities = 32/63 (50%), Positives = 37/63 (58%)
Frame = +1 / -3
Query: 235 VHDRLLHLPRGETGHLDVRPPVVEHVEASVLADGQRRVDPGEDAGLAPGSEALNDRPVDQ 414
VH R HLPR E GHLD VVEHV+ +V RV P DA A +EAL+ R VDQ
Sbjct: 664 VHGRRRHLPRVEAGHLDGAGAVVEHVQVAVAVHDVVRVHPRRDARPAAAAEALHHRVVDQ 485
Query: 415 ASQ 423
S+
Sbjct: 484 CSE 476
Score = 64.8 bits (135), Expect(3) = 3e-028
Identities = 30/73 (41%), Positives = 40/73 (54%)
Frame = -3 / +1
Query: 451 HGHLERQDIPEKPDRPVGR*ELRSRGQDLHPLQGLPVAGHRQGRSPLRVQQREGARQGVP 272
H Q + + RP+G ELR R QD+H +G+P + + P+RVQQR RQGV
Sbjct: 448 HRGARGQHLAQNTGRPLGGGELRRRRQDVHHGEGVPGPRRERQQPPVRVQQRHRRRQGVQ 627
Query: 271 SHRVGDEEAGHER 233
RVGD + ER
Sbjct: 628 PRRVGDGDGDRER 666
Score = 62.5 bits (130), Expect(4) = 9e-035
Identities = 29/53 (54%), Positives = 33/53 (62%)
Frame = +2 / -1
Query: 740 LTSTSACAVCIPVTST*CPALITLFLRVTDFALSASTSSIGHCSSCFPLGSSH 898
+TSTSACA +P+ S PAL + R T LS S SSIGHC SC P SSH
Sbjct: 165 MTSTSACAPTMPMISFTPPALTSGISRFTRLFLSVSISSIGHCRSCLPSSSSH 7
Score = 51.0 bits (105), Expect(4) = 9e-035
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = +2 / -1
Query: 554 LNTLKNTAVLSLRLAEASTHSPNGPTPPLTSARFTPH 664
LNT K TAV S EA T SPNGPT P T A F+PH
Sbjct: 345 LNTRKKTAVCSCMSPEAMTSSPNGPTLPGTDAPFSPH 235
Score = 45.1 bits (92), Expect(4) = 9e-046
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = -1 / +2
Query: 540 DKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDI 442
DK VLMCTD +KSS +Y+P + FVD DI
Sbjct: 353 DKYKVLMCTDLSKSSTRDGVYKPPYGAFVDMDI 451
Score = 31.8 bits (63), Expect(3) = 3e-028
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -2 / +3
Query: 527 CSCAPTLPSRP*TRTCTARHLQDLSTRTSR 438
CSCAPT SR CT+R T TSR
Sbjct: 366 CSCAPTSRSRAPETACTSRRTGPSWTWTSR 455
Score = 24.9 bits (48), Expect(4) = 9e-046
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2 / +3
Query: 902 RCGWTPVGSSCCSG 861
R GWT SSC SG
Sbjct: 3 RYGWTKTASSCGSG 44
Score = 24.4 bits (47), Expect(4) = 9e-035
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +2 / -1
Query: 443 MSVSTNPANVGRYRFGFRDDLVGSVHMSTTGLS 541
MS+ST G Y D SVHMST LS
Sbjct: 450 MSMSTKAPYGGLYTPSLVLDFERSVHMSTLYLS 352
>gb|BI951140.1|BI951140 HVSMEl0024K02f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0024K02f, mRNA sequence
Length = 877
Score = 183 bits (395), Expect = 2e-045
Identities = 70/102 (68%), Positives = 76/102 (74%)
Frame = -1 / +1
Query: 1902 EAAAATDQVPPSIVNPLLRTGYHFQPPKNWINDPNAPMYYKGWYHFFYQYNPKGAVWGNI 1723
EA A VP NPLLRTGYHFQPPKNWINDPN P+YYKGW H FYQYNP+GA W N
Sbjct: 139 EAVAPLPSVPGGGTNPLLRTGYHFQPPKNWINDPNGPLYYKGWCHLFYQYNPRGADWVNT 318
Query: 1722 VWAHSVSRDLINWVALEPALRPSIPGDRYGCWSGSATVLPDG 1597
+WAHS SRDLINW L AL P+I D YG W+GSAT+L DG
Sbjct: 319 LWAHSGSRDLINWNLLGLALEPNIRPDNYGVWAGSATILLDG 444
Score = 133 bits (286), Expect(2) = 5e-031
Identities = 59/101 (58%), Positives = 66/101 (65%)
Frame = +2 / -3
Query: 1577 YMITGPPPSGSTVADPDQQPYLSPGMLGLSAGSSATQLMRSRDTECAHTMLPHTAPLGLY 1756
Y T PS VA+P P LS M G A QLMRSR+ E A ++L +APLGLY
Sbjct: 464 YSPTSGVPSRRIVAEPAHTP*LSGRMFGSRAKPRRFQLMRSREPE*AQSVLTQSAPLGLY 285
Query: 1757 W*KKWYHPL*YMGALGSLIQFLGGWKWYPVLSRGLTMDGGT 1879
W* KW+HPL*Y G GSLIQFLGGWKWYPVLS+GL GT
Sbjct: 284 W*NKWHHPL*YSGPFGSLIQFLGGWKWYPVLSKGLVPPPGT 162
Score = 22.1 bits (42), Expect(2) = 5e-031
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2 / -3
Query: 1937 DAPASCNSSSKH 1972
DAPASC SS +
Sbjct: 122 DAPASCRRSSSN 87
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 875,412,003
Number of Sequences: 312970
Number of extensions: 15762886
Number of successful extensions: 180544
Number of sequences better than 1.0e-020: 229
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 26131013370
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)