TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2485939.2.1
(530 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV058923.1|CV058923 BNEL42e10 Barley EST endosperm libra... 317 1e-085
gb|CB882601.1|CB882601 HL02F10w HL Hordeum vulgare subsp. v... 317 2e-085
gb|CA002506.1|CA002506 HS07L12r HS Hordeum vulgare subsp. v... 308 1e-082
gb|BQ471469.1|BQ471469 HV02I08r HV Hordeum vulgare subsp. v... 182 2e-078
gb|CV063729.1|CV063729 BNEL92e6 Barley EST endosperm librar... 275 4e-073
gb|CV056415.1|CV056415 BNEL17E10 Barley EST endosperm libra... 272 5e-072
gb|CV058910.1|CV058910 BNEL42d1 Barley EST endosperm librar... 272 5e-072
gb|CV062377.1|CV062377 BNEL79d11 Barley EST endosperm libra... 272 5e-072
gb|CV056818.1|CV056818 BNEL20h7 Barley EST endosperm librar... 271 7e-072
gb|CV062831.1|CV062831 BNEL83e5 Barley EST endosperm librar... 269 3e-071
gb|CV058774.1|CV058774 BNEL40g12 Barley EST endosperm libra... 269 4e-071
gb|CV063055.1|CV063055 BNEL86b3 Barley EST endosperm librar... 264 1e-069
gb|CA003603.1|CA003603 HS14P22r HS Hordeum vulgare subsp. v... 231 7e-060
gb|BI946875.1|BI946875 HVSMEl0002J21f Hordeum vulgare spike... 202 4e-051
gb|BU998112.1|BU998112 HI10A14r HI Hordeum vulgare subsp. v... 201 8e-051
gb|BI959333.1|BI959333 HVSMEn0019E14f Hordeum vulgare rachi... 200 1e-050
gb|BU996472.1|BU996472 HM13L14r HM Hordeum vulgare subsp. v... 200 1e-050
emb|X70878.1|HVMYB3 H.vulgare myb3 mRNA 200 1e-050
gb|BQ761004.1|BQ761004 EBro04_SQ001_O04_R root, 3 week, sal... 197 1e-049
gb|BF261857.2|BF261857 HV_CEa0002G15f Hordeum vulgare seedl... 196 2e-049
gb|BF259477.2|BF259477 HVSMEf0019D12f Hordeum vulgare seedl... 188 7e-047
gb|BQ463523.1|BQ463523 HI05J08r HI Hordeum vulgare subsp. v... 185 4e-046
gb|AY672068.1| Hordeum vulgare subsp. vulgare myb transcrip... 184 7e-046
gb|BF620286.3|BF620286 HVSMEc0019F08f Hordeum vulgare seedl... 183 1e-045
gb|BG301022.1|BG301022 HVSMEb0019E16f Hordeum vulgare seedl... 183 2e-045
gb|BG301049.1|BG301049 HVSMEb0019G16f Hordeum vulgare seedl... 183 2e-045
gb|BF617439.1|BF617439 HVSMEc0017F20f Hordeum vulgare seedl... 172 2e-045
emb|X70881.1|HVMYB3G H.vulgare myb3 gene 137 3e-045
gb|BF259663.3|BF259663 HVSMEf0019O20f Hordeum vulgare seedl... 181 8e-045
gb|BI960347.1|BI960347 HVSMEn0024E22f Hordeum vulgare rachi... 180 1e-044
emb|X70877.1|HVMYB1 H.vulgare myb1 mRNA 180 1e-044
gb|BF627287.2|BF627287 HVSMEb0004H07f Hordeum vulgare seedl... 179 3e-044
emb|X70876.1|HVMYB2 H.vulgare myb2 mRNA 179 3e-044
gb|BI959020.1|BI959020 HVSMEn0017M09f Hordeum vulgare rachi... 178 5e-044
gb|BQ764651.1|BQ764651 EBca01_SQ004_C14_R carpel, pre-anthe... 177 1e-043
gb|BE558747.2|BE558747 HV_CEb0020E02f Hordeum vulgare seedl... 173 2e-043
gb|BM371065.2|BM371065 EBro04_SQ003_G02_R root, 3 week, sal... 176 3e-043
gb|CA032540.1|CA032540 HX13G05r HX Hordeum vulgare subsp. v... 176 3e-043
gb|BF617142.2|BF617142 HVSMEc0014M02f Hordeum vulgare seedl... 175 4e-043
gb|BE559390.2|BE559390 HV_CEb0024H06f Hordeum vulgare seedl... 175 4e-043
gb|BQ763917.1|BQ763917 EBro03_SQ005_C21_R root, 3 week, wat... 175 4e-043
gb|BF617565.3|BF617565 HVSMEc0018A12f Hordeum vulgare seedl... 173 1e-042
gb|BG343209.2|BG343209 HVSMEg0005B14f Hordeum vulgare pre-a... 173 1e-042
gb|BM371066.2|BM371066 EBro04_SQ003_G03_R root, 3 week, sal... 173 1e-042
gb|BG300704.1|BG300704 HVSMEb0018B03f Hordeum vulgare seedl... 173 2e-042
gb|CB883071.1|CB883071 HQ01B16w HQ Hordeum vulgare subsp. v... 171 5e-042
gb|BM816803.1|BM816803 HC114B11_SK.ab1 HC Hordeum vulgare s... 170 1e-041
gb|BM443626.2|BM443626 EBro02_SQ005_P07_R root, 3 week, hyd... 170 1e-041
gb|CA019900.1|CA019900 HV13K14r HV Hordeum vulgare subsp. v... 164 7e-040
gb|CA013607.1|CA013607 HT08P20r HT Hordeum vulgare subsp. v... 164 1e-039
gb|CA014662.1|CA014662 HT11P22r HT Hordeum vulgare subsp. v... 164 1e-039
emb|X87690.1|HVRNAGAM1 H.vulgare mRNA for GAMyb protein 164 1e-039
gb|CK123641.1|CK123641 BES1824104m18 BES1824 Hordeum vulgar... 163 1e-039
gb|CB876695.1|CB876695 HP02B11T HP Hordeum vulgare subsp. v... 163 2e-039
gb|AV914947.1|AV914947 AV914947 K. Sato unpublished cDNA li... 161 6e-039
emb|X70879.1|HVMYB1G H.vulgare Myb1 gene 126 9e-039
gb|BI957410.1|BI957410 HVSMEn0009G13f Hordeum vulgare rachi... 160 1e-038
gb|BM370838.2|BM370838 EBro04_SQ002_H14_R root, 3 week, sal... 160 1e-038
gb|BQ467188.1|BQ467188 HS02O24r HS Hordeum vulgare subsp. v... 159 2e-038
gb|CA027463.1|CA027463 HZ59A03r HZ Hordeum vulgare subsp. v... 158 4e-038
gb|AL507585.1|AL507585 AL507585 Hordeum vulgare Barke devel... 158 6e-038
gb|CV053597.1|CV053597 BNEL101a5 Barley EST endosperm libra... 158 6e-038
gb|BQ460434.1|BQ460434 HA09K10r HA Hordeum vulgare subsp. v... 157 1e-037
gb|BM371860.2|BM371860 EBma08_SQ004_D12_R maternal, 28 DPA,... 157 1e-037
gb|BU975173.1|BU975173 HB30F02r BC Hordeum vulgare subsp. v... 157 1e-037
gb|CB877704.1|CB877704 HP05O05T HP Hordeum vulgare subsp. v... 157 1e-037
emb|X99973.1|HVMYB4TRF H.vulgare mRNA for myb4 transcriptio... 157 1e-037
gb|BG369720.1|BG369720 HVSMEi0025K10f Hordeum vulgare 20 DA... 156 2e-037
gb|BU975705.1|BU975705 HB32A20r BC Hordeum vulgare subsp. v... 155 5e-037
gb|BI958189.1|BI958189 HVSMEn0013M24f Hordeum vulgare rachi... 154 7e-037
gb|BF626054.2|BF626054 HVSMEa0015H17f Hordeum vulgare seedl... 153 2e-036
gb|BF618630.2|BF618630 HVSMEc0006O07f Hordeum vulgare seedl... 127 1e-035
gb|BQ753632.1|BQ753632 EBan01_SQ004_M23_R anther, yellow st... 149 3e-035
gb|BQ466900.1|BQ466900 HS01O24T HS Hordeum vulgare subsp. v... 144 7e-034
gb|BF064941.1|BF064941 HV_CEb0022A15f Hordeum vulgare seedl... 89 1e-033
gb|BI779364.2|BI779364 EBro01_SQ003_M18_R root, 3 week, hyd... 124 2e-033
gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (... 123 2e-033
gb|AL507948.1|AL507948 AL507948 Hordeum vulgare Barke devel... 140 1e-032
gb|CA019195.1|CA019195 HV11C18r HV Hordeum vulgare subsp. v... 138 3e-032
gb|BQ765682.1|BQ765682 EBro03_SQ007_I24_R root, 3 week, wat... 138 6e-032
gb|AV920069.1|AV920069 AV920069 K. Sato unpublished cDNA li... 96 6e-032
emb|X70880.1|HVMYB2G H.vulgare Myb2 gene 121 4e-031
gb|AV933832.1|AV933832 AV933832 K. Sato unpublished cDNA li... 131 5e-030
gb|BI954784.1|BI954784 HVSMEm0019M04f Hordeum vulgare green... 130 9e-030
gb|BG369102.2|BG369102 HVSMEi0021L15f Hordeum vulgare 20 DA... 130 1e-029
gb|AV932650.1|AV932650 AV932650 K. Sato unpublished cDNA li... 127 8e-029
gb|BF619532.3|BF619532 HVSMEc0003P10f Hordeum vulgare seedl... 105 5e-028
gb|BQ756020.1|BQ756020 EBem05_SQ001_E11_R embryo, 14 DPA, n... 105 1e-027
gb|AL507750.1|AL507750 AL507750 Hordeum vulgare Barke devel... 105 2e-027
gb|BI956816.1|BI956816 HVSMEn0005H11f Hordeum vulgare rachi... 120 1e-026
gb|BG416961.1|BG416961 HVSMEk0015G09f Hordeum vulgare testa... 119 2e-026
gb|BG368576.2|BG368576 HVSMEi0019M02f Hordeum vulgare 20 DA... 117 6e-026
gb|CV063142.1|CV063142 BNEL87b1 Barley EST endosperm librar... 100 7e-025
gb|CV063485.1|CV063485 BNEL8H1 Barley EST endosperm library... 100 7e-025
gb|CV059557.1|CV059557 BNEL49d7 Barley EST endosperm librar... 100 7e-025
gb|CA008589.1|CA008589 HU11H04r HU Hordeum vulgare subsp. v... 114 8e-025
gb|CV057037.1|CV057037 BNEL23d1 Barley EST endosperm librar... 100 9e-025
gb|CV053601.1|CV053601 BNEL101a9 Barley EST endosperm libra... 99 2e-024
gb|BM443593.2|BM443593 EBro02_SQ005_M21_R root, 3 week, hyd... 112 2e-024
gb|CK124462.1|CK124462 BES1824109d16 BES1824 Hordeum vulgar... 98 8e-024
gb|CK124499.1|CK124499 BES1824109g02 BES1824 Hordeum vulgar... 98 8e-024
gb|AF189788.1|AF189788 Hordeum vulgare putative c-myb-like ... 96 6e-022
gb|BJ471839.1|BJ471839 BJ471839 K. Sato unpublished cDNA li... 85 7e-022
gb|CK123590.1|CK123590 BES1824104i24 BES1824 Hordeum vulgar... 103 1e-021
gb|BU998160.1|BU998160 HI10C21r HI Hordeum vulgare subsp. v... 89 2e-021
gb|BG343954.1|BG343954 HVSMEg0007D14f Hordeum vulgare pre-a... 102 3e-021
>gb|CV058923.1|CV058923 BNEL42e10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL42e10 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 717
Score = 317 bits (687), Expect = 1e-085
Identities = 122/139 (87%), Positives = 130/139 (93%)
Frame = +3 / +1
Query: 96 AMGCKACDKPKPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWI 275
AMGCKAC+KP+P+YRKGLWSPEEDQKLRDYIL HGHGCWSALPAKAGLQRNGKSC+LRWI
Sbjct: 97 AMGCKACEKPRPSYRKGLWSPEEDQKLRDYILRHGHGCWSALPAKAGLQRNGKSCKLRWI 276
Query: 276 NYLRPGLKHGMFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEG 455
NYLRPGLKHGMFSPEEEETVMSLHA LGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEG
Sbjct: 277 NYLRPGLKHGMFSPEEEETVMSLHAVLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEG 456
Query: 456 KDQGPSTPAPAASNSDDDS 512
P++P PAA++S DS
Sbjct: 457 GKGAPNSPTPAAASSAADS 513
Score = 204 bits (441), Expect(2) = 4e-060
Identities = 90/103 (87%), Positives = 92/103 (89%)
Frame = -2 / -2
Query: 511 ESSSELDAAGAGVLGPWSLPSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLIT 332
ES++EL AAG G LG PSTLFLR EFQ*FLTSLSVLPGKCRAILDHLLP AWRLIT
Sbjct: 512 ESAAELAAAGVGELGAPLPPSTLFLR*EFQ*FLTSLSVLPGKCRAILDHLLPRTAWRLIT 333
Query: 331 VSSSSGENMPCFSPGRR*LIHRSLQLLPFRWSPAFAGSALQQP 203
VSSSSGENMPCFSPGRR*LIHRSLQLLPFRWSPA AGSALQQP
Sbjct: 332 VSSSSGENMPCFSPGRR*LIHRSLQLLPFRWSPALAGSALQQP 204
Score = 127 bits (273), Expect(3) = 3e-034
Identities = 58/85 (68%), Positives = 64/85 (75%)
Frame = +2 / +3
Query: 257 LQAAVDQLPSAGAEARHVLPXXXXXXXEPPRHARQQVVQDRTALAWQDRQRGQELLELVP 436
LQAAVDQLP+AGAEARHVL EPPR RQQVV+DRTA A +DRQRGQELLEL+P
Sbjct: 258 LQAAVDQLPAAGAEARHVLSGGGGDGDEPPRRPRQQVVEDRTAFAGEDRQRGQELLELLP 437
Query: 437 QEEGRGQGPGAQHARAGGVQFGRRL 511
QEEGRG+ AQ A AGG + R L
Sbjct: 438 QEEGRGRQGSAQLAHAGGGELRRGL 512
Score = 124 bits (266), Expect(2) = 6e-030
Identities = 51/58 (87%), Positives = 53/58 (91%)
Frame = -1 / -1
Query: 401 GPARQVPCDPGPLVAERGVEAHHRLLLLRGEHAVLQPRPKVVDPPQPAALAVPLEPGF 228
GP RQ+PCDP PLVAE GVEAHHRLLLLR EHAVLQPRP+VVDPPQ AALAVPLEPGF
Sbjct: 402 GPPRQMPCDPRPLVAEDGVEAHHRLLLLRREHAVLQPRPQVVDPPQLAALAVPLEPGF 229
Score = 46.4 bits (95), Expect(2) = 4e-060
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2 / -2
Query: 157 GDHRPLR*LGLGLSHALHPIA 95
GDH P R*LGLG SHALHPIA
Sbjct: 158 GDHSPFR*LGLGFSHALHPIA 96
Score = 29.9 bits (59), Expect(3) = 3e-034
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +2
Query: 223 PRKPGSSGTARAA 261
P KPGSSGTARAA
Sbjct: 224 PLKPGSSGTARAA 262
Score = 25.8 bits (50), Expect(3) = 3e-034
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2 / +3
Query: 80 AAAFSGNGVQGVRQAQAQL 136
A+ + NGV GVR+AQA+L
Sbjct: 81 ASKQASNGV*GVREAQAEL 137
Score = 25.4 bits (49), Expect(2) = 6e-030
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 129 AWACRTPCTPL 97
AWA RTP TPL
Sbjct: 130 AWASRTPYTPL 98
>gb|CB882601.1|CB882601 HL02F10w HL Hordeum vulgare subsp. vulgare cDNA clone HL02F10
3-PRIME, mRNA sequence
Length = 610
Score = 317 bits (686), Expect = 2e-085
Identities = 123/139 (88%), Positives = 130/139 (93%)
Frame = +3 / +1
Query: 96 AMGCKACDKPKPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWI 275
AMGCKAC+KP+P+YRKGLWSPEEDQKLRDYIL HGHGCWSALPAKAGLQRNGKSCRLRWI
Sbjct: 109 AMGCKACEKPRPSYRKGLWSPEEDQKLRDYILRHGHGCWSALPAKAGLQRNGKSCRLRWI 288
Query: 276 NYLRPGLKHGMFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEG 455
NYLRPGLKHGMFS EEEETVMSLHA LGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEG
Sbjct: 289 NYLRPGLKHGMFSAEEEETVMSLHAALGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEG 468
Query: 456 KDQGPSTPAPAASNSDDDS 512
P++PAPAA++S DS
Sbjct: 469 GKGAPNSPAPAAASSAADS 525
Score = 204 bits (439), Expect(2) = 7e-060
Identities = 90/103 (87%), Positives = 92/103 (89%)
Frame = -2 / -3
Query: 511 ESSSELDAAGAGVLGPWSLPSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLIT 332
ES++EL AAGAG LG PSTLFLR EFQ*FLTSLSVLPGKCRAILDHLLP AWRLIT
Sbjct: 524 ESAAELAAAGAGELGAPLPPSTLFLR*EFQ*FLTSLSVLPGKCRAILDHLLPRAAWRLIT 345
Query: 331 VSSSSGENMPCFSPGRR*LIHRSLQLLPFRWSPAFAGSALQQP 203
VSSSS ENMPCFSPGRR*LIHRSLQLLPFRWSPA AGSALQQP
Sbjct: 344 VSSSSAENMPCFSPGRR*LIHRSLQLLPFRWSPALAGSALQQP 216
Score = 129 bits (277), Expect(3) = 8e-035
Identities = 59/85 (69%), Positives = 65/85 (76%)
Frame = +2 / +3
Query: 257 LQAAVDQLPSAGAEARHVLPXXXXXXXEPPRHARQQVVQDRTALAWQDRQRGQELLELVP 436
LQAAVDQLP+AGAEARHVL EPPR RQQVV+DRTA A +DRQRGQELLEL+P
Sbjct: 270 LQAAVDQLPAAGAEARHVLGGGGGDGDEPPRRPRQQVVEDRTAFAGEDRQRGQELLELLP 449
Query: 437 QEEGRGQGPGAQHARAGGVQFGRRL 511
QEEGRG+ AQ ARAGG + R L
Sbjct: 450 QEEGRGRQGSAQLARAGGGELRRGL 524
Score = 129 bits (276), Expect(3) = 1e-032
Identities = 52/58 (89%), Positives = 54/58 (93%)
Frame = -1 / -2
Query: 401 GPARQVPCDPGPLVAERGVEAHHRLLLLRGEHAVLQPRPKVVDPPQPAALAVPLEPGF 228
GP RQ+PCDP PLVAE GVEAHHRLLLLR EHAVLQPRP+VVDPPQPAALAVPLEPGF
Sbjct: 414 GPPRQMPCDPRPLVAEGGVEAHHRLLLLRREHAVLQPRPQVVDPPQPAALAVPLEPGF 241
Score = 46.4 bits (95), Expect(2) = 7e-060
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2 / -3
Query: 157 GDHRPLR*LGLGLSHALHPIA 95
GDH P R*LGLG SHALHPIA
Sbjct: 170 GDHSPFR*LGLGFSHALHPIA 108
Score = 29.9 bits (59), Expect(3) = 8e-035
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +2
Query: 223 PRKPGSSGTARAA 261
P KPGSSGTARAA
Sbjct: 236 PLKPGSSGTARAA 274
Score = 25.8 bits (50), Expect(3) = 8e-035
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2 / +3
Query: 80 AAAFSGNGVQGVRQAQAQL 136
A+ + NGV GVR+AQA+L
Sbjct: 93 ASKQASNGV*GVREAQAEL 149
Score = 25.4 bits (49), Expect(3) = 1e-032
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 129 AWACRTPCTPL 97
AWA RTP TPL
Sbjct: 142 AWASRTPYTPL 110
Score = 22.6 bits (43), Expect(3) = 1e-032
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3 / -1
Query: 510 SRRPNWTPPARACWA 466
S R + PPARA WA
Sbjct: 523 SPRRSSPPPARASWA 479
>gb|CA002506.1|CA002506 HS07L12r HS Hordeum vulgare subsp. vulgare cDNA clone HS07L12
5-PRIME, mRNA sequence
Length = 514
Score = 308 bits (666), Expect = 1e-082
Identities = 118/130 (90%), Positives = 123/130 (94%)
Frame = +3 / +1
Query: 96 AMGCKACDKPKPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWI 275
AMGCKAC+KP+P+YRKGLWSPEEDQKLRDYIL HGHGCWSALPAKAGLQRNGKSCRLRWI
Sbjct: 124 AMGCKACEKPRPSYRKGLWSPEEDQKLRDYILRHGHGCWSALPAKAGLQRNGKSCRLRWI 303
Query: 276 NYLRPGLKHGMFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEG 455
NYLRPGLKHGMFS EEEETVMSLHA LGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEG
Sbjct: 304 NYLRPGLKHGMFSAEEEETVMSLHAALGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEG 483
Query: 456 KDQGPSTPAP 485
P++PAP
Sbjct: 484 GKGAPNSPAP 513
Score = 192 bits (413), Expect(2) = 2e-056
Identities = 84/94 (89%), Positives = 84/94 (89%)
Frame = -2 / -3
Query: 484 GAGVLGPWSLPSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGENM 305
GAG LG PSTLFLR EFQ*FLTSLSVLPGKCRAILDHLLP AWRLITVSSSS ENM
Sbjct: 512 GAGELGAPLPPSTLFLR*EFQ*FLTSLSVLPGKCRAILDHLLPRAAWRLITVSSSSAENM 333
Query: 304 PCFSPGRR*LIHRSLQLLPFRWSPAFAGSALQQP 203
PCFSPGRR*LIHRSLQLLPFRWSPA AGSALQQP
Sbjct: 332 PCFSPGRR*LIHRSLQLLPFRWSPALAGSALQQP 231
Score = 129 bits (276), Expect(2) = 3e-031
Identities = 52/58 (89%), Positives = 54/58 (93%)
Frame = -1 / -2
Query: 401 GPARQVPCDPGPLVAERGVEAHHRLLLLRGEHAVLQPRPKVVDPPQPAALAVPLEPGF 228
GP RQ+PCDP PLVAE GVEAHHRLLLLR EHAVLQPRP+VVDPPQPAALAVPLEPGF
Sbjct: 429 GPPRQMPCDPRPLVAEGGVEAHHRLLLLRREHAVLQPRPQVVDPPQPAALAVPLEPGF 256
Score = 122 bits (261), Expect(3) = 1e-032
Identities = 55/76 (72%), Positives = 60/76 (78%)
Frame = +2 / +3
Query: 257 LQAAVDQLPSAGAEARHVLPXXXXXXXEPPRHARQQVVQDRTALAWQDRQRGQELLELVP 436
LQAAVDQLP+AGAEARHVL EPPR RQQVV+DRTA A +DRQRGQELLEL+P
Sbjct: 285 LQAAVDQLPAAGAEARHVLGGGGGDGDEPPRRPRQQVVEDRTAFAGEDRQRGQELLELLP 464
Query: 437 QEEGRGQGPGAQHARA 484
QEEGRG+ AQ ARA
Sbjct: 465 QEEGRGRQGSAQLARA 512
Score = 46.4 bits (95), Expect(2) = 2e-056
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2 / -3
Query: 157 GDHRPLR*LGLGLSHALHPIA 95
GDH P R*LGLG SHALHPIA
Sbjct: 185 GDHSPFR*LGLGFSHALHPIA 123
Score = 29.9 bits (59), Expect(3) = 1e-032
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +2
Query: 223 PRKPGSSGTARAA 261
P KPGSSGTARAA
Sbjct: 251 PLKPGSSGTARAA 289
Score = 25.8 bits (50), Expect(3) = 1e-032
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2 / +3
Query: 80 AAAFSGNGVQGVRQAQAQL 136
A+ + NGV GVR+AQA+L
Sbjct: 108 ASKQASNGV*GVREAQAEL 164
Score = 25.4 bits (49), Expect(2) = 3e-031
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 129 AWACRTPCTPL 97
AWA RTP TPL
Sbjct: 157 AWASRTPYTPL 125
>gb|BQ471469.1|BQ471469 HV02I08r HV Hordeum vulgare subsp. vulgare cDNA clone HV02I08
5-PRIME, mRNA sequence
Length = 593
Score = 182 bits (393), Expect(2) = 2e-078
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +3 / +2
Query: 96 AMGCKACDKPKPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWI 275
AMGCKAC+KP+P+YRKGLWSPEEDQKLRDYIL HGHGCWSALPAKAGLQRNGKSCRLRWI
Sbjct: 119 AMGCKACEKPRPSYRKGLWSPEEDQKLRDYILRHGHGCWSALPAKAGLQRNGKSCRLRWI 298
Query: 276 NYLRPGLKHGMFS 314
NYLRPGLKHGM S
Sbjct: 299 NYLRPGLKHGMSS 337
Score = 132 bits (282), Expect(2) = 2e-078
Identities = 53/65 (81%), Positives = 57/65 (87%)
Frame = +3 / +3
Query: 318 EEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAPAASN 497
EEEETVMSLHA LGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEG P++PAPA ++
Sbjct: 342 EEEETVMSLHAALGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGGKGAPNSPAPAXAS 521
Query: 498 SDDDS 512
S DS
Sbjct: 522 SAADS 536
Score = 115 bits (245), Expect(3) = 4e-054
Identities = 54/74 (72%), Positives = 56/74 (75%)
Frame = -2 / -2
Query: 511 ESSSELDAAGAGVLGPWSLPSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLIT 332
ES++EL AGAG LG PSTLFLR EFQ*FLTSLSVLPGKCRAILDHLLP AWRLIT
Sbjct: 535 ESAAELAXAGAGELGAPLPPSTLFLR*EFQ*FLTSLSVLPGKCRAILDHLLPRAAWRLIT 356
Query: 331 VSSSSGENMPCFSP 290
VSSSS P
Sbjct: 355 VSSSSAGRHAVLQP 314
Score = 93.6 bits (198), Expect(4) = 3e-031
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = +2 / +2
Query: 338 EPPRHARQQVVQDRTALAWQDRQRGQELLELVPQEEGRGQGPGAQHARAGGVQFGRRL 511
EPPR RQQVV+DRTA A +DRQRGQELLEL+PQEEGRG+ AQ ARAGG + R L
Sbjct: 362 EPPRRPRQQVVEDRTAFAGEDRQRGQELLELLPQEEGRGRQGSAQLARAGGGELRRGL 535
Score = 88.1 bits (186), Expect(3) = 4e-054
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = -2 / -3
Query: 313 ENMPCFSPGRR*LIHRSLQLLPFRWSPAFAGSALQQP 203
E+MPCFSPGRR*LIHRSLQLLPFRWSPA AGSALQQP
Sbjct: 336 EDMPCFSPGRR*LIHRSLQLLPFRWSPALAGSALQQP 226
Score = 69.8 bits (146), Expect(4) = 7e-029
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -1 / -2
Query: 314 GEHAVLQPRPKVVDPPQPAALAVPLEPGF 228
G HAVLQPRP+VVDPPQPAALAVPLEPGF
Sbjct: 337 GRHAVLQPRPQVVDPPQPAALAVPLEPGF 251
Score = 63.8 bits (133), Expect(4) = 7e-029
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = -1 / -1
Query: 401 GPARQVPCDPGPLVAERGVEAHHRLLLLR 315
GP RQ+PCDP PLVAE GVEAHHRLLLLR
Sbjct: 425 GPPRQMPCDPRPLVAEGGVEAHHRLLLLR 339
Score = 46.4 bits (95), Expect(3) = 4e-054
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2 / -3
Query: 157 GDHRPLR*LGLGLSHALHPIA 95
GDH P R*LGLG SHALHPIA
Sbjct: 180 GDHSPFR*LGLGFSHALHPIA 118
Score = 41.4 bits (84), Expect(4) = 3e-031
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2 / +1
Query: 257 LQAAVDQLPSAGAEARHV 310
LQAAVDQLP+AGAEARHV
Sbjct: 280 LQAAVDQLPAAGAEARHV 333
Score = 29.9 bits (59), Expect(4) = 3e-031
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +3
Query: 223 PRKPGSSGTARAA 261
P KPGSSGTARAA
Sbjct: 246 PLKPGSSGTARAA 284
Score = 25.8 bits (50), Expect(4) = 3e-031
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2 / +1
Query: 80 AAAFSGNGVQGVRQAQAQL 136
A+ + NGV GVR+AQA+L
Sbjct: 103 ASKQASNGV*GVREAQAEL 159
Score = 25.4 bits (49), Expect(4) = 7e-029
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 129 AWACRTPCTPL 97
AWA RTP TPL
Sbjct: 152 AWASRTPYTPL 120
Score = 22.6 bits (43), Expect(4) = 7e-029
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3 / -3
Query: 510 SRRPNWTPPARACWA 466
S R + PPARA WA
Sbjct: 534 SPRRSSPPPARASWA 490
>gb|CV063729.1|CV063729 BNEL92e6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL92e6 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 478
Score = 275 bits (596), Expect = 4e-073
Identities = 106/138 (76%), Positives = 114/138 (82%)
Frame = +3 / +1
Query: 99 MGCKACDKPKPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWIN 278
MGCK+C KPK +RKGLWSPEEDQKLRD+I+ HGH CWS +P KAGLQRNGKSCRLRWIN
Sbjct: 55 MGCKSCQKPKAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTVPVKAGLQRNGKSCRLRWIN 234
Query: 279 YLRPGLKHGMFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGK 458
YLRPGLKHGMFS EEEETVM LHA LGNKWS+IA+HLPGRTDNEVKNYWNSYLKKRVEG
Sbjct: 235 YLRPGLKHGMFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNYWNSYLKKRVEGA 414
Query: 459 DQGPSTPAPAASNSDDDS 512
P + A S S
Sbjct: 415 RSPPKSAGSGAPRSPTPS 468
Score = 150 bits (323), Expect(2) = 3e-040
Identities = 66/83 (79%), Positives = 69/83 (83%)
Frame = -2 / -3
Query: 454 PSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGENMPCFSPGRR*L 275
PST FLRYEFQ*F TSLSV PG+C AI DHLLP AWR +TVSSSS ENMPCFSPG R*L
Sbjct: 410 PSTRFLRYEFQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*L 231
Query: 274 IHRSLQLLPFRWSPAFAGSALQQ 206
IHRSLQLLPFR SPA G+ LQQ
Sbjct: 230 IHRSLQLLPFR*SPALTGTVLQQ 162
Score = 98.2 bits (208), Expect(2) = 4e-022
Identities = 46/77 (59%), Positives = 50/77 (64%)
Frame = +2 / +3
Query: 257 LQAAVDQLPSAGAEARHVLPXXXXXXXEPPRHARQQVVQDRTALAWQDRQRGQELLELVP 436
LQAA+DQLP AGAEARHVLP PPR RQQVV D A A D QRG+ELLELVP
Sbjct: 213 LQAAMDQLPEAGAEARHVLPGGRRDRHGPPRRPRQQVVSDSAAPAGPDGQRGEELLELVP 392
Query: 437 QEEGRGQGPGAQHARAG 487
QE RG+ + R G
Sbjct: 393 QEARRGRAVTTEIRRLG 443
Score = 33.6 bits (67), Expect(2) = 3e-040
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2 / -3
Query: 157 GDHRPLR*LGLGLSHALHPIA 95
GDH PLR LG H LHPI+
Sbjct: 113 GDHSPLRCCALGFWHDLHPIS 51
Score = 26.3 bits (51), Expect(2) = 4e-022
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 223 PRKPGSSGTARAA 261
P +PG SGTARAA
Sbjct: 179 PSRPGFSGTARAA 217
>gb|CV056415.1|CV056415 BNEL17E10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL17E10 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 479
Score = 272 bits (588), Expect = 5e-072
Identities = 105/138 (76%), Positives = 113/138 (81%)
Frame = +3 / +1
Query: 99 MGCKACDKPKPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWIN 278
MGCK+C KPK +RKGLWSPEEDQKLRD+I+ HGH CWS +P KAGLQRNGKSCRLRWIN
Sbjct: 55 MGCKSCQKPKAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTVPVKAGLQRNGKSCRLRWIN 234
Query: 279 YLRPGLKHGMFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGK 458
YLRPGLKHGMFS EEEETVM LHA LGNKWS+IA+HLPGRTDNEVKNYWNSYLKKRVEG
Sbjct: 235 YLRPGLKHGMFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNYWNSYLKKRVEGA 414
Query: 459 DQGPSTPAPAASNSDDDS 512
+ A S S
Sbjct: 415 RSPAKSAGSGAPRSPTPS 468
Score = 150 bits (323), Expect(2) = 3e-040
Identities = 66/83 (79%), Positives = 69/83 (83%)
Frame = -2 / -1
Query: 454 PSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGENMPCFSPGRR*L 275
PST FLRYEFQ*F TSLSV PG+C AI DHLLP AWR +TVSSSS ENMPCFSPG R*L
Sbjct: 410 PSTRFLRYEFQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*L 231
Query: 274 IHRSLQLLPFRWSPAFAGSALQQ 206
IHRSLQLLPFR SPA G+ LQQ
Sbjct: 230 IHRSLQLLPFR*SPALTGTVLQQ 162
Score = 98.7 bits (209), Expect(2) = 3e-022
Identities = 46/77 (59%), Positives = 51/77 (66%)
Frame = +2 / +3
Query: 257 LQAAVDQLPSAGAEARHVLPXXXXXXXEPPRHARQQVVQDRTALAWQDRQRGQELLELVP 436
LQAA+DQLP AGAEARHVLP PPR RQQVV D A A D QRG+ELLELVP
Sbjct: 213 LQAAMDQLPEAGAEARHVLPGGRRDRHGPPRRPRQQVVSDSAAPAGPDGQRGEELLELVP 392
Query: 437 QEEGRGQGPGAQHARAG 487
QE RG+ ++ R G
Sbjct: 393 QEARRGRAVTSEIRRLG 443
Score = 33.6 bits (67), Expect(2) = 3e-040
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2 / -1
Query: 157 GDHRPLR*LGLGLSHALHPIA 95
GDH PLR LG H LHPI+
Sbjct: 113 GDHSPLRCCALGFWHDLHPIS 51
Score = 26.3 bits (51), Expect(2) = 3e-022
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 223 PRKPGSSGTARAA 261
P +PG SGTARAA
Sbjct: 179 PSRPGFSGTARAA 217
>gb|CV058910.1|CV058910 BNEL42d1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL42d1 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 478
Score = 272 bits (588), Expect = 5e-072
Identities = 105/138 (76%), Positives = 113/138 (81%)
Frame = +3 / +1
Query: 99 MGCKACDKPKPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWIN 278
MGCK+C KPK +RKGLWSPEEDQKLRD+I+ HGH CWS +P KAGLQRNGKSCRLRWIN
Sbjct: 55 MGCKSCQKPKAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTVPVKAGLQRNGKSCRLRWIN 234
Query: 279 YLRPGLKHGMFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGK 458
YLRPGLKHGMFS EEEETVM LHA LGNKWS+IA+HLPGRTDNEVKNYWNSYLKKRVEG
Sbjct: 235 YLRPGLKHGMFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNYWNSYLKKRVEGA 414
Query: 459 DQGPSTPAPAASNSDDDS 512
+ A S S
Sbjct: 415 RSPAKSAGSGAPRSPTPS 468
Score = 150 bits (323), Expect(2) = 3e-040
Identities = 66/83 (79%), Positives = 69/83 (83%)
Frame = -2 / -3
Query: 454 PSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGENMPCFSPGRR*L 275
PST FLRYEFQ*F TSLSV PG+C AI DHLLP AWR +TVSSSS ENMPCFSPG R*L
Sbjct: 410 PSTRFLRYEFQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*L 231
Query: 274 IHRSLQLLPFRWSPAFAGSALQQ 206
IHRSLQLLPFR SPA G+ LQQ
Sbjct: 230 IHRSLQLLPFR*SPALTGTVLQQ 162
Score = 98.7 bits (209), Expect(2) = 3e-022
Identities = 46/77 (59%), Positives = 51/77 (66%)
Frame = +2 / +3
Query: 257 LQAAVDQLPSAGAEARHVLPXXXXXXXEPPRHARQQVVQDRTALAWQDRQRGQELLELVP 436
LQAA+DQLP AGAEARHVLP PPR RQQVV D A A D QRG+ELLELVP
Sbjct: 213 LQAAMDQLPEAGAEARHVLPGGRRDRHGPPRRPRQQVVSDSAAPAGPDGQRGEELLELVP 392
Query: 437 QEEGRGQGPGAQHARAG 487
QE RG+ ++ R G
Sbjct: 393 QEARRGRAVTSEIRRLG 443
Score = 33.6 bits (67), Expect(2) = 3e-040
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2 / -3
Query: 157 GDHRPLR*LGLGLSHALHPIA 95
GDH PLR LG H LHPI+
Sbjct: 113 GDHSPLRCCALGFWHDLHPIS 51
Score = 26.3 bits (51), Expect(2) = 3e-022
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 223 PRKPGSSGTARAA 261
P +PG SGTARAA
Sbjct: 179 PSRPGFSGTARAA 217
>gb|CV062377.1|CV062377 BNEL79d11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL79d11 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 558
Score = 272 bits (588), Expect = 5e-072
Identities = 105/138 (76%), Positives = 113/138 (81%)
Frame = +3 / +3
Query: 99 MGCKACDKPKPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWIN 278
MGCK+C KPK +RKGLWSPEEDQKLRD+I+ HGH CWS +P KAGLQRNGKSCRLRWIN
Sbjct: 135 MGCKSCQKPKAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTVPVKAGLQRNGKSCRLRWIN 314
Query: 279 YLRPGLKHGMFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGK 458
YLRPGLKHGMFS EEEETVM LHA LGNKWS+IA+HLPGRTDNEVKNYWNSYLKKRVEG
Sbjct: 315 YLRPGLKHGMFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNYWNSYLKKRVEGA 494
Query: 459 DQGPSTPAPAASNSDDDS 512
+ A S S
Sbjct: 495 RSPAKSAGSGAPRSPTPS 548
Score = 150 bits (323), Expect(3) = 1e-041
Identities = 66/83 (79%), Positives = 69/83 (83%)
Frame = -2 / -3
Query: 454 PSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGENMPCFSPGRR*L 275
PST FLRYEFQ*F TSLSV PG+C AI DHLLP AWR +TVSSSS ENMPCFSPG R*L
Sbjct: 490 PSTRFLRYEFQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*L 311
Query: 274 IHRSLQLLPFRWSPAFAGSALQQ 206
IHRSLQLLPFR SPA G+ LQQ
Sbjct: 310 IHRSLQLLPFR*SPALTGTVLQQ 242
Score = 98.7 bits (209), Expect(2) = 3e-022
Identities = 46/77 (59%), Positives = 51/77 (66%)
Frame = +2 / +2
Query: 257 LQAAVDQLPSAGAEARHVLPXXXXXXXEPPRHARQQVVQDRTALAWQDRQRGQELLELVP 436
LQAA+DQLP AGAEARHVLP PPR RQQVV D A A D QRG+ELLELVP
Sbjct: 293 LQAAMDQLPEAGAEARHVLPGGRRDRHGPPRRPRQQVVSDSAAPAGPDGQRGEELLELVP 472
Query: 437 QEEGRGQGPGAQHARAG 487
QE RG+ ++ R G
Sbjct: 473 QEARRGRAVTSEIRRLG 523
Score = 33.6 bits (67), Expect(3) = 1e-041
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2 / -3
Query: 157 GDHRPLR*LGLGLSHALHPIA 95
GDH PLR LG H LHPI+
Sbjct: 193 GDHSPLRCCALGFWHDLHPIS 131
Score = 26.3 bits (51), Expect(2) = 3e-022
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 223 PRKPGSSGTARAA 261
P +PG SGTARAA
Sbjct: 259 PSRPGFSGTARAA 297
Score = 23.1 bits (44), Expect(3) = 1e-041
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3 / -2
Query: 96 PENAAASKLRAGPADAAEAQRREG 25
P NA + RAG A ++ +RR G
Sbjct: 128 PRNAGGAGGRAGDAVHSKQERRRG 57
>gb|CV056818.1|CV056818 BNEL20h7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL20h7 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 514
Score = 271 bits (587), Expect = 7e-072
Identities = 102/119 (85%), Positives = 109/119 (91%)
Frame = +3 / +3
Query: 99 MGCKACDKPKPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWIN 278
MGCK+C KPK +RKGLWSPEEDQKLRD+I+ HGH CWS +P KAGLQRNGKSCRLRWIN
Sbjct: 135 MGCKSCQKPKAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTVPVKAGLQRNGKSCRLRWIN 314
Query: 279 YLRPGLKHGMFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEG 455
YLRPGLKHGMFS EEEETVM LHA LGNKWS+IA+HLPGRTDNEVKNYWNSYLKKRVEG
Sbjct: 315 YLRPGLKHGMFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNYWNSYLKKRVEG 491
Score = 150 bits (323), Expect(3) = 1e-041
Identities = 66/83 (79%), Positives = 69/83 (83%)
Frame = -2 / -1
Query: 454 PSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGENMPCFSPGRR*L 275
PST FLRYEFQ*F TSLSV PG+C AI DHLLP AWR +TVSSSS ENMPCFSPG R*L
Sbjct: 490 PSTRFLRYEFQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*L 311
Query: 274 IHRSLQLLPFRWSPAFAGSALQQ 206
IHRSLQLLPFR SPA G+ LQQ
Sbjct: 310 IHRSLQLLPFR*SPALTGTVLQQ 242
Score = 96.4 bits (204), Expect(2) = 1e-021
Identities = 44/67 (65%), Positives = 47/67 (70%)
Frame = +2 / +2
Query: 257 LQAAVDQLPSAGAEARHVLPXXXXXXXEPPRHARQQVVQDRTALAWQDRQRGQELLELVP 436
LQAA+DQLP AGAEARHVLP PPR RQQVV D A A D QRG+ELLELVP
Sbjct: 293 LQAAMDQLPEAGAEARHVLPGGRRDRHGPPRRPRQQVVSDSAAPAGPDGQRGEELLELVP 472
Query: 437 QEEGRGQ 457
QE RG+
Sbjct: 473 QEARRGR 493
Score = 33.6 bits (67), Expect(3) = 1e-041
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2 / -1
Query: 157 GDHRPLR*LGLGLSHALHPIA 95
GDH PLR LG H LHPI+
Sbjct: 193 GDHSPLRCCALGFWHDLHPIS 131
Score = 26.3 bits (51), Expect(2) = 1e-021
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 223 PRKPGSSGTARAA 261
P +PG SGTARAA
Sbjct: 259 PSRPGFSGTARAA 297
Score = 23.1 bits (44), Expect(3) = 1e-041
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3 / -3
Query: 96 PENAAASKLRAGPADAAEAQRREG 25
P NA + RAG A ++ +RR G
Sbjct: 128 PRNAGGAGGRAGDAVHSKQERRRG 57
>gb|CV062831.1|CV062831 BNEL83e5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL83e5 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 588
Score = 269 bits (582), Expect = 3e-071
Identities = 104/138 (75%), Positives = 112/138 (81%)
Frame = +3 / +2
Query: 99 MGCKACDKPKPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWIN 278
MGCK+C KPK +RKGLWSPEEDQKLRD+I+ HGH CWS +P KAGLQRNGKSCRLRWIN
Sbjct: 161 MGCKSCQKPKAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTVPVKAGLQRNGKSCRLRWIN 340
Query: 279 YLRPGLKHGMFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGK 458
YLRPGLKHGMFS EEEETVM LHA LGNKWS+IA+HLPGRTDNEVKNYWNSYLK RVEG
Sbjct: 341 YLRPGLKHGMFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNYWNSYLKMRVEGA 520
Query: 459 DQGPSTPAPAASNSDDDS 512
+ A S S
Sbjct: 521 RSPAKSAGSGAPRSPTPS 574
Score = 148 bits (317), Expect(3) = 8e-041
Identities = 65/83 (78%), Positives = 68/83 (81%)
Frame = -2 / -1
Query: 454 PSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGENMPCFSPGRR*L 275
PST LRYEFQ*F TSLSV PG+C AI DHLLP AWR +TVSSSS ENMPCFSPG R*L
Sbjct: 516 PSTRILRYEFQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*L 337
Query: 274 IHRSLQLLPFRWSPAFAGSALQQ 206
IHRSLQLLPFR SPA G+ LQQ
Sbjct: 336 IHRSLQLLPFR*SPALTGTVLQQ 268
Score = 97.3 bits (206), Expect(2) = 7e-022
Identities = 45/77 (58%), Positives = 51/77 (66%)
Frame = +2 / +1
Query: 257 LQAAVDQLPSAGAEARHVLPXXXXXXXEPPRHARQQVVQDRTALAWQDRQRGQELLELVP 436
LQAA+DQLP AGAEARHVLP PPR RQQVV D A A D QRG+ELLELVP
Sbjct: 319 LQAAMDQLPEAGAEARHVLPGGRRDRHGPPRRPRQQVVSDSAAPAGPDGQRGEELLELVP 498
Query: 437 QEEGRGQGPGAQHARAG 487
Q+ RG+ ++ R G
Sbjct: 499 QDARRGRAVTSEIRRLG 549
Score = 33.6 bits (67), Expect(3) = 8e-041
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2 / -1
Query: 157 GDHRPLR*LGLGLSHALHPIA 95
GDH PLR LG H LHPI+
Sbjct: 219 GDHSPLRCCALGFWHDLHPIS 157
Score = 26.3 bits (51), Expect(2) = 7e-022
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 223 PRKPGSSGTARAA 261
P +PG SGTARAA
Sbjct: 285 PSRPGFSGTARAA 323
Score = 23.1 bits (44), Expect(3) = 8e-041
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3 / -3
Query: 96 PENAAASKLRAGPADAAEAQRREG 25
P NA + RAG A ++ +RR G
Sbjct: 154 PRNAGGAGGRAGDAVHSKQERRRG 83
>gb|CV058774.1|CV058774 BNEL40g12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL40g12 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 488
Score = 269 bits (581), Expect = 4e-071
Identities = 101/118 (85%), Positives = 108/118 (91%)
Frame = +3 / +3
Query: 99 MGCKACDKPKPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWIN 278
MGCK+C KPK +RKGLWSPEEDQKLRD+I+ HGH CWS +P KAGLQRNGKSCRLRWIN
Sbjct: 135 MGCKSCQKPKAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTVPVKAGLQRNGKSCRLRWIN 314
Query: 279 YLRPGLKHGMFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVE 452
YLRPGLKHGMFS EEEETVM LHA LGNKWS+IA+HLPGRTDNEVKNYWNSYLKKRVE
Sbjct: 315 YLRPGLKHGMFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNYWNSYLKKRVE 488
Score = 147 bits (316), Expect(3) = 1e-040
Identities = 65/82 (79%), Positives = 68/82 (82%)
Frame = -2 / -2
Query: 451 STLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGENMPCFSPGRR*LI 272
ST FLRYEFQ*F TSLSV PG+C AI DHLLP AWR +TVSSSS ENMPCFSPG R*LI
Sbjct: 487 STRFLRYEFQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*LI 308
Query: 271 HRSLQLLPFRWSPAFAGSALQQ 206
HRSLQLLPFR SPA G+ LQQ
Sbjct: 307 HRSLQLLPFR*SPALTGTVLQQ 242
Score = 33.6 bits (67), Expect(3) = 1e-040
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2 / -2
Query: 157 GDHRPLR*LGLGLSHALHPIA 95
GDH PLR LG H LHPI+
Sbjct: 193 GDHSPLRCCALGFWHDLHPIS 131
Score = 23.1 bits (44), Expect(3) = 1e-040
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3 / -1
Query: 96 PENAAASKLRAGPADAAEAQRREG 25
P NA + RAG A ++ +RR G
Sbjct: 128 PRNAGGAGGRAGDAVHSKQERRRG 57
>gb|CV063055.1|CV063055 BNEL86b3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL86b3 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 715
Score = 264 bits (570), Expect = 1e-069
Identities = 105/139 (75%), Positives = 113/139 (81%)
Frame = +3 / +1
Query: 96 AMGCKACDKPKPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWI 275
AMGCK C+KPKP+YRKGLWSP EDQKLRDYIL HGHGCWSAL AKAGLQRNGKSCRLRWI
Sbjct: 97 AMGCKECEKPKPSYRKGLWSPVEDQKLRDYILRHGHGCWSALTAKAGLQRNGKSCRLRWI 276
Query: 276 NYLRPGLKHGMFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEG 455
NYLR GLKHGMFSPEEEET MSLHA LGNKWS I R++P RTDN+VKNYWN YL KRV+G
Sbjct: 277 NYLRAGLKHGMFSPEEEETEMSLHAALGNKWSWIERNMPLRTDNDVKNYWNCYL*KRVQG 456
Query: 456 KDQGPSTPAPAASNSDDDS 512
+ P + DS
Sbjct: 457 GKVAINWGTPGGDSYGVDS 513
Score = 144 bits (310), Expect(2) = 8e-042
Identities = 71/103 (68%), Positives = 76/103 (73%)
Frame = -2 / -3
Query: 511 ESSSELDAAGAGVLGPWSLPSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLIT 332
ES+ L G L P TLF R +FQ*FLTSLSVL G R+I DHL P A RLI+
Sbjct: 512 ESTP*LSPPGVPQLIATFPPWTLF*R*QFQ*FLTSLSVLNGIFRSIHDHLFPRAACRLIS 333
Query: 331 VSSSSGENMPCFSPGRR*LIHRSLQLLPFRWSPAFAGSALQQP 203
VSSSSGEN+PCFSP RR*LIHRSLQLLPFRWSPA A SALQQP
Sbjct: 332 VSSSSGENIPCFSPARR*LIHRSLQLLPFRWSPALAVSALQQP 204
Score = 105 bits (225), Expect(2) = 2e-024
Identities = 45/58 (77%), Positives = 49/58 (84%)
Frame = -1 / -2
Query: 401 GPARQVPCDPGPLVAERGVEAHHRLLLLRGEHAVLQPRPKVVDPPQPAALAVPLEPGF 228
GP R +P DP PLV+ GV AH RLLLLR EH+VLQPRP+VVDPPQPAALAVPLEPGF
Sbjct: 402 GPQRHIPFDPRPLVS*GGV*AHLRLLLLR*EHSVLQPRPQVVDPPQPAALAVPLEPGF 229
Score = 95.5 bits (202), Expect(3) = 8e-025
Identities = 48/85 (56%), Positives = 54/85 (63%)
Frame = +2 / +3
Query: 257 LQAAVDQLPSAGAEARHVLPXXXXXXXEPPRHARQQVVQDRTALAWQDRQRGQELLELVP 436
LQAAVDQLP+ GAEAR+VL EP R R+QVV DRT A +DRQR QELLEL+P
Sbjct: 258 LQAAVDQLPAGGAEARNVLT*GGGDGDEPTRRPRKQVVVDRTEYAVEDRQRCQELLELLP 437
Query: 437 QEEGRGQGPGAQHARAGGVQFGRRL 511
EEG G+ Q GG Q R L
Sbjct: 438 LEEGPGRKGSDQLGHTGGGQLRRGL 512
Score = 45.1 bits (92), Expect(2) = 8e-042
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / -3
Query: 157 GDHRPLR*LGLGLSHALHPIA 95
GDH P R*LGLG SH+LHPIA
Sbjct: 158 GDHSPFR*LGLGFSHSLHPIA 96
Score = 29.9 bits (59), Expect(3) = 8e-025
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +1 / +2
Query: 223 PRKPGSSGTARAA 261
P KPGSSGTARAA
Sbjct: 224 PLKPGSSGTARAA 262
Score = 25.8 bits (50), Expect(3) = 8e-025
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2 / +3
Query: 80 AAAFSGNGVQGVRQAQAQL 136
A+ + NGV GVR+AQA+L
Sbjct: 81 ASKQASNGV*GVREAQAEL 137
Score = 25.4 bits (49), Expect(2) = 2e-024
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 129 AWACRTPCTPL 97
AWA RTP TPL
Sbjct: 130 AWASRTPYTPL 98
>gb|CA003603.1|CA003603 HS14P22r HS Hordeum vulgare subsp. vulgare cDNA clone HS14P22
5-PRIME, mRNA sequence
Length = 405
Score = 231 bits (499), Expect = 7e-060
Identities = 88/94 (93%), Positives = 91/94 (96%)
Frame = +3 / +1
Query: 96 AMGCKACDKPKPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWI 275
AMGCKAC+KP+P+YRKGLWSPEEDQKLRDYIL HGHGCWSALPAKAGLQRNGKSCRLRWI
Sbjct: 124 AMGCKACEKPRPSYRKGLWSPEEDQKLRDYILRHGHGCWSALPAKAGLQRNGKSCRLRWI 303
Query: 276 NYLRPGLKHGMFSPEEEETVMSLHATLGNKWSRI 377
NYLRPGLKHGMFS EEEETVMSLHA LGNKWSRI
Sbjct: 304 NYLRPGLKHGMFSAEEEETVMSLHAALGNKWSRI 405
Score = 131 bits (280), Expect(2) = 3e-038
Identities = 54/58 (93%), Positives = 54/58 (93%)
Frame = -2 / -2
Query: 376 ILDHLLPSVAWRLITVSSSSGENMPCFSPGRR*LIHRSLQLLPFRWSPAFAGSALQQP 203
ILDHLLP AWRLITVSSSS ENMPCFSPGRR*LIHRSLQLLPFRWSPA AGSALQQP
Sbjct: 404 ILDHLLPRAAWRLITVSSSSAENMPCFSPGRR*LIHRSLQLLPFRWSPALAGSALQQP 231
Score = 111 bits (237), Expect(2) = 4e-026
Identities = 46/50 (92%), Positives = 47/50 (94%)
Frame = -1 / -1
Query: 377 DPGPLVAERGVEAHHRLLLLRGEHAVLQPRPKVVDPPQPAALAVPLEPGF 228
DP PLVAE GVEAHHRLLLLR EHAVLQPRP+VVDPPQPAALAVPLEPGF
Sbjct: 405 DPRPLVAEGGVEAHHRLLLLRREHAVLQPRPQVVDPPQPAALAVPLEPGF 256
Score = 46.4 bits (95), Expect(2) = 3e-038
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2 / -2
Query: 157 GDHRPLR*LGLGLSHALHPIA 95
GDH P R*LGLG SHALHPIA
Sbjct: 185 GDHSPFR*LGLGFSHALHPIA 123
Score = 25.4 bits (49), Expect(2) = 4e-026
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 129 AWACRTPCTPL 97
AWA RTP TPL
Sbjct: 157 AWASRTPYTPL 125
>gb|BI946875.1|BI946875 HVSMEl0002J21f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0002J21f, mRNA sequence
Length = 845
Score = 202 bits (435), Expect = 4e-051
Identities = 74/117 (63%), Positives = 91/117 (77%)
Frame = +3 / +3
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K ++GLWSPEED+KL YI HGH CWSA+P AGLQR GKSCRLRWINYLRP LK G
Sbjct: 69 KQKVKRGLWSPEEDEKLLSYITAHGHSCWSAVPKNAGLQRCGKSCRLRWINYLRPDLKRG 248
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPST 476
FS +EE T++ +H LGN+W++IA+HLPGRTDNEVKN+WNS +KK++ + P T
Sbjct: 249 TFSEQEERTILDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGLDPKT 419
Score = 108 bits (230), Expect = 3e-023
Identities = 52/90 (57%), Positives = 58/90 (64%)
Frame = -2 / -2
Query: 475 VLGPWSLPSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGENMPCF 296
VLG + FL +EFQ FLTSLSV PG+C AI H LP + W V SS E +P
Sbjct: 418 VLGSRPCAMSFFLMHEFQKFLTSLSVRPGRCLAICAHRLPKMRWTSRMVRSSCSEKVPRL 239
Query: 295 SPGRR*LIHRSLQLLPFRWSPAFAGSALQQ 206
GRR*LIHRS QLLP R SPAF G+ALQQ
Sbjct: 238 RSGRR*LIHRSRQLLPQRCSPAFLGTALQQ 149
>gb|BU998112.1|BU998112 HI10A14r HI Hordeum vulgare subsp. vulgare cDNA clone HI10A14
5-PRIME, mRNA sequence
Length = 580
Score = 201 bits (433), Expect = 8e-051
Identities = 74/108 (68%), Positives = 89/108 (82%)
Frame = +3 / +1
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K R+GLWSPEED+KL YI HGHGCWS++P +AGLQR GKSCRLRWINYLRP LK G
Sbjct: 85 KQKVRRGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWINYLRPDLKRG 264
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRV 449
FS EEE ++ LH LGN+W++IA+HLPGRTDNEVKN+WNS +KK++
Sbjct: 265 SFSQEEEALIVELHRVLGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKL 408
Score = 113 bits (242), Expect = 6e-025
Identities = 55/103 (53%), Positives = 60/103 (58%)
Frame = -2 / -3
Query: 448 TLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGENMPCFSPGRR*LIH 269
+ FL EFQ F TSLSVLPG+C AI HL PS W +SSS E +P G R*LIH
Sbjct: 407 SFFLMVEFQKFFTSLSVLPGRCLAIWAHLFPSTLWSSTMRASSSCEKLPLLRSGLR*LIH 228
Query: 268 RSLQLLPFRWSPAFAGSALQQPXXXXXXXXXXXXXXSGDHRPL 140
RSLQLLP SPA G+ LQQP SGDHRPL
Sbjct: 227 RSLQLLPHLCSPACLGTELQQPWPCAVMYLTSFSSSSGDHRPL 99
>gb|BI959333.1|BI959333 HVSMEn0019E14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019E14f, mRNA sequence
Length = 635
Score = 200 bits (431), Expect = 1e-050
Identities = 75/123 (60%), Positives = 96/123 (78%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
+P RKGLWSPEED+KL ++I+ HG GCWS++P A L R GKSCRLRWINYLRP LK G
Sbjct: 110 QPKVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRG 289
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
FS +EE+ +++LH LGN+WS+IA HLPGRTDNE+KN+WNS +KK++ + P+T P
Sbjct: 290 CFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKP 469
Query: 486 AAS 494
AS
Sbjct: 470 MAS 478
Score = 109 bits (233), Expect = 1e-023
Identities = 59/122 (48%), Positives = 65/122 (53%)
Frame = -2 / -3
Query: 493 DAAGAGVLGPWSLPSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSG 314
+A G V G + FL FQ FL SLSV PG+C AI DHLLP + W SSS
Sbjct: 477 EAMGLCVAGSMPCCRSFFLMQLFQKFLISLSVRPGRCDAI*DHLLPRIWWSATMWSSSCW 298
Query: 313 ENMPCFSPGRR*LIHRSLQLLPFRWSPAFAGSALQQPXXXXXXXXXXXXXXSGDHRPLR* 134
E P GRR*LIHR QLLP R+S A G+ LQQP SGDH PLR
Sbjct: 297 EKQPRLRSGRR*LIHRRRQLLPQRFSAASLGTELQQPTPCRMMWL*SFSSSSGDHSPLRT 118
Query: 133 LG 128
LG
Sbjct: 117 LG 112
>gb|BU996472.1|BU996472 HM13L14r HM Hordeum vulgare subsp. vulgare cDNA clone HM13L14
5-PRIME, mRNA sequence
Length = 648
Score = 200 bits (431), Expect = 1e-050
Identities = 75/123 (60%), Positives = 96/123 (78%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
+P RKGLWSPEED+KL ++I+ HG GCWS++P A L R GKSCRLRWINYLRP LK G
Sbjct: 119 QPKVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRG 298
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
FS +EE+ +++LH LGN+WS+IA HLPGRTDNE+KN+WNS +KK++ + P+T P
Sbjct: 299 CFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKP 478
Query: 486 AAS 494
AS
Sbjct: 479 MAS 487
Score = 109 bits (233), Expect = 1e-023
Identities = 59/122 (48%), Positives = 65/122 (53%)
Frame = -2 / -1
Query: 493 DAAGAGVLGPWSLPSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSG 314
+A G V G + FL FQ FL SLSV PG+C AI DHLLP + W SSS
Sbjct: 486 EAMGLCVAGSMPCCRSFFLMQLFQKFLISLSVRPGRCDAI*DHLLPRIWWSATMWSSSCW 307
Query: 313 ENMPCFSPGRR*LIHRSLQLLPFRWSPAFAGSALQQPXXXXXXXXXXXXXXSGDHRPLR* 134
E P GRR*LIHR QLLP R+S A G+ LQQP SGDH PLR
Sbjct: 306 EKQPRLRSGRR*LIHRRRQLLPQRFSAASLGTELQQPTPCRMMWL*SFSSSSGDHSPLRT 127
Query: 133 LG 128
LG
Sbjct: 126 LG 121
>emb|X70878.1|HVMYB3 H.vulgare myb3 mRNA
Length = 1270
Score = 200 bits (431), Expect = 1e-050
Identities = 75/123 (60%), Positives = 96/123 (78%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
+P RKGLWSPEED+KL ++I+ HG GCWS++P A L R GKSCRLRWINYLRP LK G
Sbjct: 95 QPKVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRG 274
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
FS +EE+ +++LH LGN+WS+IA HLPGRTDNE+KN+WNS +KK++ + P+T P
Sbjct: 275 CFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKP 454
Query: 486 AAS 494
AS
Sbjct: 455 MAS 463
>gb|BQ761004.1|BQ761004 EBro04_SQ001_O04_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_O04 5', mRNA sequence
Length = 383
Score = 197 bits (424), Expect = 1e-049
Identities = 73/120 (60%), Positives = 94/120 (78%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
+P RKGLWSPEED+KL ++I+ HG GCWS++P A L R GKSCRLRWINYLRP LK G
Sbjct: 23 QPKVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRG 202
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
FS +EE+ +++LH LGN+WS+IA HLPGRTDNE+KN+WNS +KK++ + P+T P
Sbjct: 203 CFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKP 382
Score = 107 bits (228), Expect = 5e-023
Identities = 58/119 (48%), Positives = 63/119 (52%)
Frame = -2 / -3
Query: 484 GAGVLGPWSLPSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGENM 305
G V G + FL FQ FL SLSV PG+C AI DHLLP + W SSS E
Sbjct: 381 GLCVAGSMPCCRSFFLMQLFQKFLISLSVRPGRCDAI*DHLLPRIWWSATMWSSSCWEKQ 202
Query: 304 PCFSPGRR*LIHRSLQLLPFRWSPAFAGSALQQPXXXXXXXXXXXXXXSGDHRPLR*LG 128
P GRR*LIHR QLLP R+S A G+ LQQP SGDH PLR LG
Sbjct: 201 PRLRSGRR*LIHRRRQLLPQRFSAASLGTELQQPTPCRMMWL*SFSSSSGDHSPLRTLG 25
>gb|BF261857.2|BF261857 HV_CEa0002G15f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0002G15f, mRNA sequence
Length = 853
Score = 196 bits (423), Expect = 2e-049
Identities = 73/120 (60%), Positives = 95/120 (79%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K ++GLWSPEED+KL ++I +G+GCWS++P AGL+R GKSCRLRWINYLRP LK G
Sbjct: 218 KKRLKRGLWSPEEDEKLMNHIAKYGNGCWSSVPKIAGLERCGKSCRLRWINYLRPDLKRG 397
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
FS EEE+ ++ LH+ LGNKWS+IA LPGRTDNEVKN+WNS++KK++ + P+T P
Sbjct: 398 AFSQEEEDLIIHLHSILGNKWSQIAAQLPGRTDNEVKNFWNSFIKKKLRQRGIDPATHKP 577
Score = 100 bits (212), Expect = 8e-021
Identities = 54/116 (46%), Positives = 60/116 (51%)
Frame = -2 / -2
Query: 490 AAGAGVLGPWSLPSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGE 311
++G V G + FL EFQ FLTSLSV PG C AI DHLLP + R + SSSS E
Sbjct: 582 SSGLWVAGSMPRWRSFFLMKEFQKFLTSLSVRPGSCAAI*DHLLPRMEXRWMMRSSSSCE 403
Query: 310 NMPCFSPGRR*LIHRSLQLLPFRWSPAFAGSALQQPXXXXXXXXXXXXXXSGDHRP 143
P G R* IH SLQL P PA G+ LQQP SGD RP
Sbjct: 402 KAPLLRSGLR*FIHLSLQLFPHLSRPAILGTELQQPLPYLAMWFISFSSSSGDQRP 235
>gb|BF259477.2|BF259477 HVSMEf0019D12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019D12f, mRNA sequence
Length = 577
Score = 188 bits (404), Expect = 7e-047
Identities = 70/116 (60%), Positives = 86/116 (74%)
Frame = +3 / +3
Query: 138 RKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHGMFSP 317
+KG W+ EED+KL YI HGHG W ALP AGL R GKSCRLRW NYL+P +K G FS
Sbjct: 120 KKGPWTSEEDEKLMSYIQKHGHGSWRALPQLAGLNRCGKSCRLRWTNYLKPDIKRGKFSQ 299
Query: 318 EEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
EEE+T++ LH LGNKWS IA+HLPGRTDNE+KN+WN++L+K++ P T P
Sbjct: 300 EEEQTILQLHTVLGNKWSAIAKHLPGRTDNEIKNFWNTHLRKKLIKMGIDPMTHRP 467
>gb|BQ463523.1|BQ463523 HI05J08r HI Hordeum vulgare subsp. vulgare cDNA clone HI05J08
5-PRIME, mRNA sequence
Length = 436
Score = 185 bits (399), Expect = 4e-046
Identities = 68/98 (69%), Positives = 83/98 (84%)
Frame = +3 / +2
Query: 138 RKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHGMFSP 317
RKGLWSPEED+KL ++I+ +G GCWS++P AGLQR GKSCRLRWINYLRP LK G FS
Sbjct: 143 RKGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSQ 322
Query: 318 EEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNS 431
+EE+ ++ LH LGN+WS+IA HLPGRTDNE+KN+WNS
Sbjct: 323 QEEDAIVGLHEILGNRWSQIASHLPGRTDNEIKNFWNS 436
>gb|AY672068.1| Hordeum vulgare subsp. vulgare myb transcription factor mRNA,
complete cds
Length = 1542
Score = 184 bits (397), Expect = 7e-046
Identities = 70/105 (66%), Positives = 85/105 (80%)
Frame = +3 / +2
Query: 138 RKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHGMFSP 317
RKGLWSPEED++L Y+L G G WS + AGLQR GKSCRLRWINYLRP LK G FSP
Sbjct: 182 RKGLWSPEEDERLVAYMLRSGQGSWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSP 361
Query: 318 EEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVE 452
EE+ +++LHA LGN+WS+IA LPGRTDNE+KN+WNS +KKR++
Sbjct: 362 HEEDLIVNLHAILGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLK 496
Score = 111 bits (236), Expect = 4e-024
Identities = 56/114 (49%), Positives = 61/114 (53%)
Frame = -2 / -1
Query: 442 FLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGENMPCFSPGRR*LIHRS 263
FL EFQ FL SLSV PG AI DHLLP +AWRL SSS GE P GRR*LIHR
Sbjct: 486 FLMVEFQKFLISLSVRPGNLAAI*DHLLPRMAWRLTMRSSSCGEKAPRLRSGRR*LIHRR 307
Query: 262 LQLLPFRWSPAFAGSALQQPXXXXXXXXXXXXXXSGDHRPLR*LGLGLSHALHP 101
QLLP R +PA ++L P SGDH P R L + L P
Sbjct: 306 RQLLPHRCNPALRATSLHDP*PLRSMYATSLSSSSGDHSPFRSLAAAAATLLFP 145
>gb|BF620286.3|BF620286 HVSMEc0019F08f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0019F08f, mRNA sequence
Length = 690
Score = 183 bits (395), Expect = 1e-045
Identities = 72/117 (61%), Positives = 87/117 (74%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K +KG W+ EED+KL +I HGHG W ALP+KAGLQR GKSCRLRW NYLRP +K G
Sbjct: 47 KVGLKKGPWTTEEDEKLLAHIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYLRPDIKRG 226
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPST 476
FS +EE+T++ LHA LGN+WS IA HL RTDNE+KNYWN++LKKR+ P T
Sbjct: 227 KFSLQEEQTIIQLHALLGNRWSAIATHLSRRTDNEIKNYWNTHLKKRLAKMGIDPVT 397
>gb|BG301022.1|BG301022 HVSMEb0019E16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019E16f, mRNA sequence
Length = 625
Score = 183 bits (394), Expect = 2e-045
Identities = 68/123 (55%), Positives = 89/123 (72%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K + KG W+ EEDQ+L YI HG GCW +LP AGL R GKSCRLRW+NYLRP LK G
Sbjct: 104 KAHTNKGAWTKEEDQRLIGYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNYLRPDLKRG 283
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
F+ +++E ++ LHA LGNKWS IA LPGRTDNE+KNYWN+++K+++ + P T P
Sbjct: 284 NFTDDDDELIIKLHALLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLNRGMDPHTHRP 463
Query: 486 AAS 494
++
Sbjct: 464 ISA 472
>gb|BG301049.1|BG301049 HVSMEb0019G16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019G16f, mRNA sequence
Length = 624
Score = 183 bits (394), Expect = 2e-045
Identities = 68/123 (55%), Positives = 89/123 (72%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K + KG W+ EEDQ+L YI HG GCW +LP AGL R GKSCRLRW+NYLRP LK G
Sbjct: 104 KAHTNKGAWTKEEDQRLIGYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNYLRPDLKRG 283
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
F+ +++E ++ LHA LGNKWS IA LPGRTDNE+KNYWN+++K+++ + P T P
Sbjct: 284 NFTDDDDELIIKLHALLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLNRGMDPHTHRP 463
Query: 486 AAS 494
++
Sbjct: 464 ISA 472
>gb|BF617439.1|BF617439 HVSMEc0017F20f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0017F20f, mRNA sequence
Length = 786
Score = 172 bits (370), Expect(2) = 2e-045
Identities = 65/108 (60%), Positives = 85/108 (78%)
Frame = +3 / +3
Query: 168 QKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHGMFSPEEEETVMSLH 347
+KL ++I +G+GCWS++P AGL+R GKSCRLRWINYLRP LK G FS EEE+ ++ LH
Sbjct: 180 RKLMNHIAKYGNGCWSSVPKIAGLERCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIHLH 359
Query: 348 ATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAPAA 491
+ LGNKWS+IA LPGRTDNEVKN+WNS++KK++ + P+T P A
Sbjct: 360 SILGNKWSQIAAQLPGRTDNEVKNFWNSFIKKKLRQRGIDPATHKPLA 503
Score = 101 bits (215), Expect = 3e-021
Identities = 51/96 (53%), Positives = 56/96 (58%)
Frame = -2 / -3
Query: 490 AAGAGVLGPWSLPSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGE 311
A+G V G + FL EFQ FLTSLSV PG C AI DHLLP + WR + SSSS E
Sbjct: 502 ASGLWVAGSMPRWRSFFLMKEFQKFLTSLSVRPGSCAAI*DHLLPRMEWRWMMRSSSSCE 323
Query: 310 NMPCFSPGRR*LIHRSLQLLPFRWSPAFAGSALQQP 203
P G R* IH SLQL P PA G+ LQQP
Sbjct: 322 KAPLLRSGLR*FIHLSLQLFPHLSRPAILGTELQQP 215
Score = 31.3 bits (62), Expect(2) = 2e-045
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQK 173
K ++GLWSPEED+K
Sbjct: 137 KKRLKRGLWSPEEDEK 184
>emb|X70881.1|HVMYB3G H.vulgare myb3 gene
Length = 3241
Score = 137 bits (293), Expect(2) = 3e-045
Identities = 51/87 (58%), Positives = 67/87 (77%)
Frame = +3 / +3
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
+P RKGLWSPEED+KL ++I+ HG GCWS++P A L R GKSCRLRWINYLRP LK G
Sbjct: 1095 QPKVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRG 1274
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARH 386
FS +EE+ +++LH LGN++ ++ H
Sbjct: 1275 CFSQQEEDHIVALHQILGNRFVQLRIH 1355
Score = 69.8 bits (146), Expect(2) = 3e-045
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = +3 / +1
Query: 363 KWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAPAAS 494
+WS+IA HLPGRTDNE+KN+WNS +KK++ + P+T P AS
Sbjct: 1486 RWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKPMAS 1617
>gb|BF259663.3|BF259663 HVSMEf0019O20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019O20f, mRNA sequence
Length = 528
Score = 181 bits (389), Expect = 8e-045
Identities = 67/120 (55%), Positives = 89/120 (74%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K + KG W+ EED++L ++ HG GCW +LP+ AGL R GKSCRLRWINYLRP LK G
Sbjct: 92 KAHTNKGAWTREEDERLVAHVRAHGEGCWRSLPSAAGLLRCGKSCRLRWINYLRPDLKRG 271
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
FS +E+E ++ LH+ LGNKWS IA LPGRTDNE+KNYWN+++++++ G+ P T P
Sbjct: 272 NFSRDEDELIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIRRKLLGRGIDPVTHRP 451
>gb|BI960347.1|BI960347 HVSMEn0024E22f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024E22f, mRNA sequence
Length = 669
Score = 180 bits (388), Expect = 1e-044
Identities = 68/117 (58%), Positives = 85/117 (72%)
Frame = +3 / +3
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K + KG W+ EED +L YI HG GCW +LP AGL R GKSCRLRWINYLRP LK G
Sbjct: 96 KAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRG 275
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPST 476
FS EE+E ++ LH+ LGNKWS IA LPGRTDNE+KNYWN+++++++ + P T
Sbjct: 276 NFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLTSRGIDPVT 446
>emb|X70877.1|HVMYB1 H.vulgare myb1 mRNA
Length = 1284
Score = 180 bits (388), Expect = 1e-044
Identities = 68/117 (58%), Positives = 85/117 (72%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K + KG W+ EED +L YI HG GCW +LP AGL R GKSCRLRWINYLRP LK G
Sbjct: 236 KAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRG 415
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPST 476
FS EE+E ++ LH+ LGNKWS IA LPGRTDNE+KNYWN+++++++ + P T
Sbjct: 416 NFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLTSRGIDPVT 586
>gb|BF627287.2|BF627287 HVSMEb0004H07f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004H07f, mRNA sequence
Length = 756
Score = 179 bits (385), Expect = 3e-044
Identities = 68/126 (53%), Positives = 89/126 (70%)
Frame = +3 / +1
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K + KG W+ EEDQ+L YI +G GCW +LP AGL R GKSCRLRW+NYLRP LK G
Sbjct: 76 KEHTNKGAWTKEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNYLRPDLKRG 255
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
F+ +E+E ++ LH+ LGNKWS IA LPGRTDNE+KNYWN+++K+++ + P T P
Sbjct: 256 NFTDDEDELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLSRGMDPHTHRP 435
Query: 486 AASNSD 503
+ D
Sbjct: 436 LTAVID 453
>emb|X70876.1|HVMYB2 H.vulgare myb2 mRNA
Length = 1102
Score = 179 bits (385), Expect = 3e-044
Identities = 68/126 (53%), Positives = 89/126 (70%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K + KG W+ EEDQ+L YI +G GCW +LP AGL R GKSCRLRW+NYLRP LK G
Sbjct: 68 KEHTNKGAWTKEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNYLRPDLKRG 247
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
F+ +E+E ++ LH+ LGNKWS IA LPGRTDNE+KNYWN+++K+++ + P T P
Sbjct: 248 NFTDDEDELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLSRGMDPHTHRP 427
Query: 486 AASNSD 503
+ D
Sbjct: 428 LTAVID 445
>gb|BI959020.1|BI959020 HVSMEn0017M09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017M09f, mRNA sequence
Length = 656
Score = 178 bits (383), Expect = 5e-044
Identities = 68/117 (58%), Positives = 84/117 (71%)
Frame = +3 / +1
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K N ++G W+PEED KL YI HG W +P AGLQR GKSCRLRW NYLRP LKHG
Sbjct: 37 KDNVKRGQWTPEEDNKLLSYITQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHG 216
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPST 476
F+ EE+T++ LH+ +GN+WS IA LPGRTDN+VKN+WN+ LKK++ G P T
Sbjct: 217 EFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNHWNTKLKKKLSGMGIDPIT 387
Score = 100 bits (214), Expect = 4e-021
Identities = 47/89 (52%), Positives = 54/89 (60%)
Frame = -2 / -1
Query: 475 VLGPWSLPSTLFLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGENMPCF 296
V+G +P + FL FQ FLTSLSV PG AI DHLLP+ L+ V SS+ N PC
Sbjct: 386 VMGSMPIPDSFFLSLVFQWFLTSLSVRPGSWAAITDHLLPTTECSLMMVCSSASVNSPCL 207
Query: 295 SPGRR*LIHRSLQLLPFRWSPAFAGSALQ 209
GRR*L+HR QL P R SPAF G Q
Sbjct: 206 RSGRR*LVHRRRQLFPQRCSPAFLGMRRQ 120
>gb|BQ764651.1|BQ764651 EBca01_SQ004_C14_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_C14 5', mRNA sequence
Length = 576
Score = 177 bits (380), Expect = 1e-043
Identities = 70/125 (56%), Positives = 85/125 (68%)
Frame = +3 / +1
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
+P RKG W+ EED L YI HG G W L AGL RNGKSCRLRW+NYLRPGL+ G
Sbjct: 88 EPAVRKGPWTLEEDLILVGYISQHGEGSWDNLARSAGLNRNGKSCRLRWLNYLRPGLRRG 267
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
SPEE+ + LH+ LGNKWS IA+HLPGRTDNEVKNYW + + K+ ++Q + P
Sbjct: 268 SISPEEDMVIRELHSRLGNKWSEIAKHLPGRTDNEVKNYWRTRVHKKAPHQNQLRAQPCL 447
Query: 486 AASNS 500
A S +
Sbjct: 448 ATSEA 462
>gb|BE558747.2|BE558747 HV_CEb0020E02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020E02f, mRNA sequence
Length = 796
Score = 173 bits (372), Expect(2) = 2e-043
Identities = 64/108 (59%), Positives = 81/108 (75%)
Frame = +3 / +1
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K ++G W+ EED L +YI HG G W +LP AGL R GKSCRLRWINYLR G++ G
Sbjct: 235 KVGLKRGRWTAEEDDILANYIAQHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRDGVRRG 414
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRV 449
S EE++ ++ LHATLGN+WS IA HLPGRTDNE+KNYWNS+L +++
Sbjct: 415 NISKEEDDLIVKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 558
Score = 100 bits (212), Expect = 8e-021
Identities = 50/79 (63%), Positives = 55/79 (69%)
Frame = -2 / -3
Query: 439 LRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGENMPCFSPGRR*LIHRSL 260
LR+EFQ*FL SLSV PG+ AI DHLLP VA L SSSS E +P +P R*LIHRSL
Sbjct: 548 LRWEFQ*FLISLSVRPGRWLAIRDHLLPRVA*SLTMRSSSSLEMLPLLTPSLR*LIHRSL 369
Query: 259 QLLPFRWSPAFAGSALQQP 203
QLLP SPAF G L +P
Sbjct: 368 QLLPHLSSPAFLGRDLHEP 312
Score = 23.1 bits (44), Expect(2) = 2e-043
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1 / +2
Query: 76 GGGGILRQWGARRA 117
GG R WG RRA
Sbjct: 188 GGSSYTRGWGGRRA 229
>gb|BM371065.2|BM371065 EBro04_SQ003_G02_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_G02 5', mRNA sequence
Length = 604
Score = 176 bits (378), Expect = 3e-043
Identities = 70/122 (57%), Positives = 88/122 (72%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K ++G W+PEED+ L +I HGHG W ALP +AGL R GKSCRLRWINYLRP +K G
Sbjct: 155 KMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRG 334
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
FS EEE++++ LH LGN+WS IA LPGRTDNE+KN W+++LKKR++ Q A
Sbjct: 335 NFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLDPSAQEQQEEAG 514
Query: 486 AA 491
AA
Sbjct: 515 AA 520
>gb|CA032540.1|CA032540 HX13G05r HX Hordeum vulgare subsp. vulgare cDNA clone HX13G05
5-PRIME, mRNA sequence
Length = 639
Score = 176 bits (378), Expect = 3e-043
Identities = 70/122 (57%), Positives = 88/122 (72%)
Frame = +3 / +3
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K ++G W+PEED+ L +I HGHG W ALP +AGL R GKSCRLRWINYLRP +K G
Sbjct: 156 KMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRG 335
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
FS EEE++++ LH LGN+WS IA LPGRTDNE+KN W+++LKKR++ Q A
Sbjct: 336 NFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLDPSAQEQQEEAG 515
Query: 486 AA 491
AA
Sbjct: 516 AA 521
>gb|BF617142.2|BF617142 HVSMEc0014M02f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0014M02f, mRNA sequence
Length = 771
Score = 175 bits (377), Expect = 4e-043
Identities = 66/120 (55%), Positives = 87/120 (72%)
Frame = +3 / +3
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K + KG W+ EEDQ+L YI +G GCW +LP AGL R GKSCRLRW+NYLRP LK G
Sbjct: 60 KEHTNKGAWTTEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNYLRPDLKRG 239
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
F+ + +E ++ LH+ LGNKWS IA LPGRTDNE+KNYWN+++K+++ + P+T P
Sbjct: 240 NFTDD*DELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLSRGMDPNTHRP 419
>gb|BE559390.2|BE559390 HV_CEb0024H06f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024H06f, mRNA sequence
Length = 906
Score = 175 bits (377), Expect = 4e-043
Identities = 70/122 (57%), Positives = 88/122 (72%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K ++G W+PEED+ L +I HGHG W ALP +AGL R GKSCRLRWINYLRP +K G
Sbjct: 149 KMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRG 328
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
FS EEE++++ LH LGN+WS IA LPGRTDNE+KN W+++LKKR++ Q A
Sbjct: 329 NFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLDPSAQEQHEEAG 508
Query: 486 AA 491
AA
Sbjct: 509 AA 514
>gb|BQ763917.1|BQ763917 EBro03_SQ005_C21_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_C21 5', mRNA sequence
Length = 681
Score = 175 bits (377), Expect = 4e-043
Identities = 70/122 (57%), Positives = 88/122 (72%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K ++G W+PEED+ L +I HGHG W ALP +AGL R GKSCRLRWINYLRP +K G
Sbjct: 143 KMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRG 322
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
FS EEE++++ LH LGN+WS IA LPGRTDNE+KN W+++LKKR++ Q A
Sbjct: 323 NFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLDPSAQEQQRXAG 502
Query: 486 AA 491
AA
Sbjct: 503 AA 508
>gb|BF617565.3|BF617565 HVSMEc0018A12f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0018A12f, mRNA sequence
Length = 777
Score = 173 bits (373), Expect = 1e-042
Identities = 67/113 (59%), Positives = 85/113 (75%)
Frame = +3 / +1
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K ++G W+PEED+ L +I HGHG W ALP +AGL R GKSCRLRWINYLRP +K G
Sbjct: 139 KMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRG 318
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQ 464
FS EEE++++ LH LGN+WS IA LPGRTDNE+KN W+++LKKR++ Q
Sbjct: 319 NFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLDPSAQ 477
>gb|BG343209.2|BG343209 HVSMEg0005B14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005B14f, mRNA sequence
Length = 935
Score = 173 bits (373), Expect = 1e-042
Identities = 67/113 (59%), Positives = 85/113 (75%)
Frame = +3 / +3
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K ++G W+PEED+ L +I HGHG W ALP +AGL R GKSCRLRWINYLRP +K G
Sbjct: 153 KMGLKRGPWTPEEDKILVAHIHRHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRG 332
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQ 464
FS EEE++++ LH LGN+WS IA LPGRTDNE+KN W+++LKKR++ Q
Sbjct: 333 NFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLDPSAQ 491
>gb|BM371066.2|BM371066 EBro04_SQ003_G03_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_G03 5', mRNA sequence
Length = 501
Score = 173 bits (373), Expect = 1e-042
Identities = 67/113 (59%), Positives = 85/113 (75%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K ++G W+PEED+ L +I HGHG W ALP +AGL R GKSCRLRWINYLRP +K G
Sbjct: 155 KMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRG 334
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQ 464
FS EEE++++ LH LGN+WS IA LPGRTDNE+KN W+++LKKR++ Q
Sbjct: 335 NFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLDPSAQ 493
>gb|BG300704.1|BG300704 HVSMEb0018B03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0018B03f, mRNA sequence
Length = 609
Score = 173 bits (372), Expect = 2e-042
Identities = 66/109 (60%), Positives = 84/109 (77%)
Frame = +3 / +1
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K ++G W+PEED+ L +I HGHG W ALP +AGL R GKSCRLRWINYLRP +K G
Sbjct: 154 KMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRG 333
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVE 452
FS EEE++++ LH LGN+WS IA LPGRTDNE+KN W+++LKKR++
Sbjct: 334 NFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLD 480
>gb|CB883071.1|CB883071 HQ01B16w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ01B16
3-PRIME, mRNA sequence
Length = 535
Score = 171 bits (369), Expect = 5e-042
Identities = 65/116 (56%), Positives = 83/116 (71%)
Frame = +3 / +1
Query: 102 GCKACDKPKPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINY 281
G C + + +KG W+PEED+ L DY+ + G W LP AGL R GKSCRLRW NY
Sbjct: 103 GRTPCCESRQGLKKGPWTPEEDKLLVDYVQANAPGNWRMLPKLAGLNRCGKSCRLRWTNY 282
Query: 282 LRPGLKHGMFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRV 449
LRP +K G F+PEE ++++ LHA +GNKWS IA LPGRTDNE+KNYWN+ LKK++
Sbjct: 283 LRPDIKRGPFTPEEHKSILQLHAIVGNKWSMIAAQLPGRTDNEIKNYWNTNLKKQL 450
Score = 102 bits (217), Expect = 2e-021
Identities = 51/100 (51%), Positives = 56/100 (56%)
Frame = -2 / -3
Query: 442 FLRYEFQ*FLTSLSVLPGKCRAILDHLLPSVAWRLITVSSSSGENMPCFSPGRR*LIHRS 263
FLR FQ*FL SLSV PG C AI+DHLLP++AW SSG P GRR* +HRS
Sbjct: 443 FLRLVFQ*FLISLSVRPGSCAAIMDHLLPTMAWSWRMDLCSSGVKGPRLMSGRR*FVHRS 264
Query: 262 LQLLPFRWSPAFAGSALQQPXXXXXXXXXXXXXXSGDHRP 143
QLLP R+SPA GS Q P SG H P
Sbjct: 263 RQLLPHRFSPASLGSMRQLPGALAWT*STRSLSSSGVHGP 144
>gb|BM816803.1|BM816803 HC114B11_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC114B11_SK.ab1 similar to myb protein homolog - rice
gi|1946265|emb|CAA72217.1| (Y11414) myb [Oryza sativa],
mRNA sequence
Length = 879
Score = 170 bits (366), Expect = 1e-041
Identities = 66/120 (55%), Positives = 84/120 (70%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K ++G W+ EED L +I HGH W ALP +AGL R GKSCRLRWINYLRP +K G
Sbjct: 188 KMGLKRGPWTAEEDMTLVAHIEQHGHSNWRALPNQAGLLRCGKSCRLRWINYLRPDIKRG 367
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
F+ EEE+ ++ LHA LGN+WS IA LPGRTDNE+KN W+++LKKR++ + AP
Sbjct: 368 NFTSEEEDAIIQLHAMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLQSSSKPSGQAAP 547
>gb|BM443626.2|BM443626 EBro02_SQ005_P07_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_P07 5', mRNA sequence
Length = 523
Score = 170 bits (366), Expect = 1e-041
Identities = 66/120 (55%), Positives = 84/120 (70%)
Frame = +3 / +2
Query: 126 KPNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 305
K ++G W+ EED L +I HGH W ALP +AGL R GKSCRLRWINYLRP +K G
Sbjct: 158 KMGLKRGPWTAEEDMTLVAHIEQHGHSNWRALPNQAGLLRCGKSCRLRWINYLRPDIKRG 337
Query: 306 MFSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGKDQGPSTPAP 485
F+ EEE+ ++ LHA LGN+WS IA LPGRTDNE+KN W+++LKKR++ + AP
Sbjct: 338 NFTSEEEDAIIQLHAMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLQSSSKPSGQAAP 517
>gb|CA019900.1|CA019900 HV13K14r HV Hordeum vulgare subsp. vulgare cDNA clone HV13K14
5-PRIME, mRNA sequence
Length = 465
Score = 164 bits (353), Expect = 7e-040
Identities = 60/105 (57%), Positives = 77/105 (73%)
Frame = +3 / +3
Query: 129 PNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHGM 308
PN +G W+ ED L DY+ HG G W+A+ GL R GKSCRLRW N+LRP LK G
Sbjct: 18 PNRHEGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGA 197
Query: 309 FSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKK 443
F+PEEE ++ LH+ +GNKW+R+A HLPGRTDNE+KNYWN+ +K+
Sbjct: 198 FTPEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 332
>gb|CA013607.1|CA013607 HT08P20r HT Hordeum vulgare subsp. vulgare cDNA clone HT08P20
5-PRIME, mRNA sequence
Length = 569
Score = 164 bits (352), Expect = 1e-039
Identities = 60/105 (57%), Positives = 77/105 (73%)
Frame = +3 / +2
Query: 129 PNYRKGLWSPEEDQKLRDYILLHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHGM 308
P +KG W+ ED L DY+ HG G W+A+ GL R GKSCRLRW N+LRP LK G
Sbjct: 167 PPLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGA 346
Query: 309 FSPEEEETVMSLHATLGNKWSRIARHLPGRTDNEVKNYWNSYLKK 443
F+PEEE ++ LH+ +GNKW+R+A HLPGRTDNE+KNYWN+ +K+
Sbjct: 347 FTPEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 481
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 245,784,869
Number of Sequences: 312970
Number of extensions: 4034763
Number of successful extensions: 127082
Number of sequences better than 1.0e-020: 138
length of database: 58,378,179
effective HSP length: 50
effective length of database: 42,729,679
effective search space used: 5383939554
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)