TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478398.2.5
(1385 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU990124.1|BU990124 HF24C15r HF Hordeum vulgare subsp. v... 442 e-126
gb|BM444264.1|BM444264 EBem09_SQ004_K07_R embryo, 1 Day ger... 438 e-122
gb|BF265822.1|BF265822 HV_CEa0013G21f Hordeum vulgare seedl... 334 e-112
gb|BU990653.1|BU990653 HF25K21r HF Hordeum vulgare subsp. v... 355 e-100
gb|AV917174.1|AV917174 AV917174 K. Sato unpublished cDNA li... 352 1e-099
gb|BU972271.1|BU972271 HB21C19r BC Hordeum vulgare subsp. v... 347 6e-098
gb|BQ465058.1|BQ465058 HU02I12r HU Hordeum vulgare subsp. v... 357 8e-098
gb|CV062418.1|CV062418 BNEL79g9 Barley EST endosperm librar... 331 6e-090
gb|BM816745.1|BM816745 HB02D10_T3.ab1 HB Hordeum vulgare su... 233 2e-085
gb|CA014815.1|CA014815 HT12G23r HT Hordeum vulgare subsp. v... 301 3e-084
gb|CB859369.1|CB859369 HI10E02w HI Hordeum vulgare subsp. v... 309 2e-083
gb|BQ663500.1|BQ663500 HU02O17u HU Hordeum vulgare subsp. v... 296 2e-079
gb|BG415776.2|BG415776 HVSMEk0007M10f Hordeum vulgare testa... 237 3e-078
gb|BQ662921.1|BQ662921 HS04M10u HS Hordeum vulgare subsp. v... 291 6e-078
gb|AV927744.1|AV927744 AV927744 K. Sato unpublished cDNA li... 203 1e-076
gb|BQ465233.1|BQ465233 HU03A07r HU Hordeum vulgare subsp. v... 273 5e-076
gb|AW982908.2|AW982908 HVSMEg0004I13f Hordeum vulgare pre-a... 225 9e-075
gb|BE194657.3|BE194657 HVSMEh0086G10f Hordeum vulgare 5-45 ... 194 3e-073
gb|CA002012.1|CA002012 HS06E04r HS Hordeum vulgare subsp. v... 218 1e-072
gb|BF265820.1|BF265820 HV_CEa0013G19f Hordeum vulgare seedl... 134 5e-071
gb|CV054303.1|CV054303 BNEL109a5 Barley EST endosperm libra... 262 3e-069
gb|BQ465196.1|BQ465196 HU02O17r HU Hordeum vulgare subsp. v... 244 3e-068
gb|BQ470277.1|BQ470277 HX02G12r HX Hordeum vulgare subsp. v... 244 3e-068
gb|CA021658.1|CA021658 HZ40K23r HZ Hordeum vulgare subsp. v... 179 5e-061
gb|CA007157.1|CA007157 HU06P10r HU Hordeum vulgare subsp. v... 212 1e-058
gb|CA032718.1|CA032718 HX14A06r HX Hordeum vulgare subsp. v... 208 2e-057
gb|BQ467754.1|BQ467754 HS04M10r HS Hordeum vulgare subsp. v... 204 3e-056
gb|CA009861.1|CA009861 HT12G23u HT Hordeum vulgare subsp. v... 210 1e-053
gb|BU989668.1|BU989668 HF22F24r HF Hordeum vulgare subsp. v... 203 2e-053
gb|BU998184.1|BU998184 HI10E02r HI Hordeum vulgare subsp. v... 192 2e-052
gb|BM377223.2|BM377223 EBem05_SQ004_H19_R embryo, 14 DPA, n... 130 4e-052
gb|BQ466667.1|BQ466667 HS01D11T HS Hordeum vulgare subsp. v... 198 8e-050
gb|BQ466990.1|BQ466990 HS02D11r HS Hordeum vulgare subsp. v... 198 8e-050
gb|BQ662231.1|BQ662231 HS01D11w HS Hordeum vulgare subsp. v... 198 8e-050
gb|BQ464988.1|BQ464988 HU02F10r HU Hordeum vulgare subsp. v... 191 9e-048
gb|BG414493.2|BG414493 HVSMEk0002K22f Hordeum vulgare testa... 108 8e-045
gb|BF629961.2|BF629961 HVSMEb0007H14f Hordeum vulgare seedl... 127 1e-044
gb|BQ662841.1|BQ662841 HS04G18u HS Hordeum vulgare subsp. v... 171 8e-042
gb|AV923038.1|AV923038 AV923038 K. Sato unpublished cDNA li... 120 2e-040
gb|AV931983.1|AV931983 AV931983 K. Sato unpublished cDNA li... 120 2e-040
gb|BF617114.2|BF617114 HVSMEc0014K08f Hordeum vulgare seedl... 112 2e-034
gb|BG300415.1|BG300415 HVSMEb0016P04f Hordeum vulgare seedl... 130 1e-029
gb|BJ456143.1|BJ456143 BJ456143 K. Sato unpublished cDNA li... 101 1e-023
gb|BU983341.1|BU983341 HA29G12r HA Hordeum vulgare subsp. v... 105 2e-023
gb|BF624483.3|BF624483 HVSMEa0016L04f Hordeum vulgare seedl... 109 3e-023
gb|CA026092.1|CA026092 HZ54G07r HZ Hordeum vulgare subsp. v... 105 8e-022
>gb|BU990124.1|BU990124 HF24C15r HF Hordeum vulgare subsp. vulgare cDNA clone HF24C15
5-PRIME, mRNA sequence
Length = 700
Score = 442 bits (960), Expect(2) = e-126
Identities = 172/190 (90%), Positives = 181/190 (95%)
Frame = +3 / +1
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+C+LRGNEFFCEVDDDYIQDDFNLCGLS QVPYY+YALDLILD+ESSHGDMFTE
Sbjct: 73 TSWISWFCSLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYEYALDLILDVESSHGDMFTE 252
Query: 597 EQNELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLPVGQSD 776
EQNEL ESAAEMLYGLIH RYILTSKGLAAML+KYKNYDFGRCPRV+C GQPCLPVGQSD
Sbjct: 253 EQNELIESAAEMLYGLIHVRYILTSKGLAAMLDKYKNYDFGRCPRVHCSGQPCLPVGQSD 432
Query: 777 IHRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYEHLKPQKLSQRYVPR 956
I RSS VKIYCPKCED+YYPRSKYQ NIDGAYFGTTFPHLFLMTY HLKPQK SQ+YVP+
Sbjct: 433 IPRSSNVKIYCPKCEDLYYPRSKYQSNIDGAYFGTTFPHLFLMTYPHLKPQKPSQQYVPK 612
Query: 957 VFGFKLHKP* 986
VFGFKLHKP*
Sbjct: 613 VFGFKLHKP* 642
Score = 173 bits (372), Expect(2) = 5e-062
Identities = 79/111 (71%), Positives = 88/111 (79%)
Frame = -2 / -3
Query: 985 HGLWSLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSMLPWYLDRG**MSSHLGQ 806
+GL SLKPKT GT C+ F G +C VIRN+*GNVVPKYAPSML YLD G** SSH GQ
Sbjct: 641 YGL*SLKPKTLGTYCCDGFWGFKCG*VIRNK*GNVVPKYAPSMLL*YLDLG**RSSHFGQ 462
Query: 805 YIFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSIAASPLLVRMYR 653
IFT+L+R MSD PTGRHG P Q T GH PKS*FLY S+IAA+PLLVR+YR
Sbjct: 461 *IFTLLERGMSDWPTGRHGWPLQCTLGHLPKS*FLYLSNIAANPLLVRIYR 309
Score = 166 bits (357), Expect(2) = 3e-055
Identities = 71/136 (52%), Positives = 97/136 (71%)
Frame = -1 / -2
Query: 983 WLVELEAKDTRNIALRELLWLEVLVCHQEQMRERCPKVCAVDVALVLGPWVVDVFTLGAV 804
WL++ EAK+ + L L L++ V HQ+Q+R+RCPKV V+VAL+ G +V++FTL AV
Sbjct: 639 WLMKFEAKNLGYVLL*RFLGLQMWVGHQKQVRKRCPKVRPVNVALIFGSRIVEIFTLWAV 460
Query: 803 YLHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQHCSQSFTGQNVSCMDQPIKHLC 624
H TR+ +V L+NW+AWL V++ KVIVL+ +QHCSQ FT N+S M+Q IKHLC
Sbjct: 459 NFHITRTRNVRLANWKAWLAATVHSWTSAKVIVLVFIQHCSQPFTC*NISNMNQSIKHLC 280
Query: 623 S*FSELILFLSEHITM 576
S*F++ IL EHITM
Sbjct: 279 S*FNKFILLFCEHITM 232
Score = 144 bits (310), Expect(2) = 5e-041
Identities = 64/134 (47%), Positives = 84/134 (62%)
Frame = +2 / +3
Query: 569 IISW*YVH*GTK*ARRISCRDALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPACLLLWS 748
+ +W*YVH +* ISCRDALW D C+I+S++*R GCN G + EL*LW + L
Sbjct: 225 VFTW*YVHRRAE*TY*ISCRDALWIDSCSIYSNK*RVGCNVG*IQEL*LWQMSKSAL*RP 404
Query: 749 TMPASWTIRHPSI*YREDILPQV*RHLLPTVQVPRQHRRRILWDNVPSSVPDDIRAPQAT 928
TMP+SW + H S * E++LP+V*R LL +Q+ +QH R +LWDNV S V DD+ +A
Sbjct: 405 TMPSSWPVGHSSF**CENLLPKV*RSLLSEIQISKQH*RGVLWDNVSSLVSDDLPTFEAP 584
Query: 929 EXXXXXXXXXXWLQ 970
E WLQ
Sbjct: 585 ETVTAVRTQGFWLQ 626
Score = 136 bits (292), Expect = 2e-031
Identities = 80/188 (42%), Positives = 88/188 (46%)
Frame = -3 / -1
Query: 984 MACGA*SQRHEEHXXXXXXXXXXXXXXXGTDEGTLSQSMRRRCCLGTWTVGSRCLHTWGS 805
MA *SQ+ T E TLSQS R+CC W SR LHT GS
Sbjct: 640 MAYEV*SQKPWVRTAVTVSGASNVGRSSETSEETLSQSTPRQCCFDIWISDSRDLHTLGS 461
Query: 804 ISSRY*IDGCLIVQLAGMVDHSSKHAGTAQSHSSYTSPALQPVLYWSECIVHGSAHKASL 625
S Y* + C QL GMV S QSHSS P LQP LY E I H S HKASL
Sbjct: 460 KFSHY*NEECPTGQLEGMVGRYSALLDICQSHSSCIYPTLQPTLYLLEYIEHESIHKASL 281
Query: 624 QLILRAHFVPQ*TYHHEMIQYLK*DREHNHNKELGC*GHKG*SRLECXXXXXXXXXXXXX 445
QLI H *TYHH ++ * +EH HN EL H+ *+RL C
Sbjct: 280 QLIQ*VHSALL*TYHHVKTRHPI*GQEHIHNMELDRLAHRD*NRLVCNRHQLHRRTHCPA 101
Query: 444 SCNTMKST 421
S TMKST
Sbjct: 100 SYRTMKST 77
Score = 132 bits (283), Expect = 4e-030
Identities = 60/107 (56%), Positives = 72/107 (67%)
Frame = +1 / +2
Query: 577 MVICSLRNKMSSENQLQRCFMG*SMHDTF*PVKDWLQCWRSIRTMTLGGARVFTAVVNHA 756
MVICS +++M+ NQLQRCFM * M D F* VK WLQCW + RTMTL + T NHA
Sbjct: 233 MVICSQKSRMNLLNQLQRCFMD*FMFDIF*QVKGWLQCWINTRTMTLADVQECTVAANHA 412
Query: 757 CQLDNQTSIDLVP*RYTAPSVKTSTTHGPSTKATSTAHTLGQRSLIC 897
QL ++T + LV *++TA SVK ST P+ KAT T TLGQR L C
Sbjct: 413 FQLASRTFLVLVM*KFTAQSVKISTIRDPNIKATLTGRTLGQRFLTC 553
Score = 85.8 bits (181), Expect(2) = 5e-062
Identities = 43/66 (65%), Positives = 46/66 (69%)
Frame = -2 / -3
Query: 592 VNISP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVS 413
VNISP +DS S +RSRA S* GT L PQRLK SQKNS P KLQ HEIH+VS
Sbjct: 248 VNISPCEDSTSNIRSRAYS*YGT*PLSPQRLKSSCM*SSSTSQKNSLPRKLQNHEIHDVS 69
Query: 412 SPSEPL 395
SPSEPL
Sbjct: 68 SPSEPL 51
Score = 70.3 bits (147), Expect(2) = 3e-055
Identities = 31/61 (50%), Positives = 41/61 (67%)
Frame = -1 / -2
Query: 527 NLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIRLPFGAA 348
NL A T++E+VL V++I+FTEELI P*NPR +FSIR T +* FT+ +R G
Sbjct: 183 NLTA*PTEIEIVLYVIVINFTEELIAPQATEP*NPRCIFSIRTTQV*FFTVSVRFSIGQL 4
Query: 347 A 345
A
Sbjct: 3 A 1
Score = 44.1 bits (90), Expect(2) = 5e-041
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +2 / +3
Query: 386 IRC*WL*WRRHLVDFMVLQLKRE*VLL*SR**LH 487
IR W *WRR++VDFMVL L +*VLL*S * LH
Sbjct: 42 IRPEWF*WRRYIVDFMVL*LAGQ*VLL*S**RLH 143
Score = 32.2 bits (64), Expect(2) = e-126
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 373 LIVKHQMLVALMEKTPRGFHG 435
L VK+Q V LMEK RGFHG
Sbjct: 29 LTVKNQT*VVLMEKIHRGFHG 91
>gb|BM444264.1|BM444264 EBem09_SQ004_K07_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ004_K07 5', mRNA sequence
Length = 574
Score = 438 bits (951), Expect = e-122
Identities = 170/188 (90%), Positives = 179/188 (95%)
Frame = +3 / +2
Query: 423 WISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTEEQ 602
WISW+C+LRGNEFFCEVDDDYIQDDFNLCGLS QVPYY+YALDLILD+ESSHGDMFTEEQ
Sbjct: 2 WISWFCSLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYEYALDLILDVESSHGDMFTEEQ 181
Query: 603 NELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIH 782
NEL ESAAEMLYGLIH RYILTSKGLAAML+KYKNYDFGRCPRV+C GQPCLPVGQSDI
Sbjct: 182 NELIESAAEMLYGLIHVRYILTSKGLAAMLDKYKNYDFGRCPRVHCSGQPCLPVGQSDIP 361
Query: 783 RSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYEHLKPQKLSQRYVPRVF 962
RSS VKIYCPKCED+YYPRSKYQ NIDGAYFGTTFPHLFLMTY HLKPQK SQ+YVP+VF
Sbjct: 362 RSSNVKIYCPKCEDLYYPRSKYQSNIDGAYFGTTFPHLFLMTYPHLKPQKPSQQYVPKVF 541
Query: 963 GFKLHKP* 986
GFKLHKP*
Sbjct: 542 GFKLHKP* 565
Score = 173 bits (372), Expect(2) = 2e-056
Identities = 79/111 (71%), Positives = 88/111 (79%)
Frame = -2 / -2
Query: 985 HGLWSLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSMLPWYLDRG**MSSHLGQ 806
+GL SLKPKT GT C+ F G +C VIRN+*GNVVPKYAPSML YLD G** SSH GQ
Sbjct: 564 YGL*SLKPKTLGTYCCDGFWGFKCG*VIRNK*GNVVPKYAPSMLL*YLDLG**RSSHFGQ 385
Query: 805 YIFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSIAASPLLVRMYR 653
IFT+L+R MSD PTGRHG P Q T GH PKS*FLY S+IAA+PLLVR+YR
Sbjct: 384 *IFTLLERGMSDWPTGRHGWPLQCTLGHLPKS*FLYLSNIAANPLLVRIYR 232
Score = 166 bits (357), Expect(2) = 3e-047
Identities = 71/136 (52%), Positives = 97/136 (71%)
Frame = -1 / -1
Query: 983 WLVELEAKDTRNIALRELLWLEVLVCHQEQMRERCPKVCAVDVALVLGPWVVDVFTLGAV 804
WL++ EAK+ + L L L++ V HQ+Q+R+RCPKV V+VAL+ G +V++FTL AV
Sbjct: 562 WLMKFEAKNLGYVLL*RFLGLQMWVGHQKQVRKRCPKVRPVNVALIFGSRIVEIFTLWAV 383
Query: 803 YLHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQHCSQSFTGQNVSCMDQPIKHLC 624
H TR+ +V L+NW+AWL V++ KVIVL+ +QHCSQ FT N+S M+Q IKHLC
Sbjct: 382 NFHITRTRNVRLANWKAWLAATVHSWTSAKVIVLVFIQHCSQPFTC*NISNMNQSIKHLC 203
Query: 623 S*FSELILFLSEHITM 576
S*F++ IL EHITM
Sbjct: 202 S*FNKFILLFCEHITM 155
Score = 144 bits (310), Expect(2) = 1e-035
Identities = 64/134 (47%), Positives = 84/134 (62%)
Frame = +2 / +1
Query: 569 IISW*YVH*GTK*ARRISCRDALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPACLLLWS 748
+ +W*YVH +* ISCRDALW D C+I+S++*R GCN G + EL*LW + L
Sbjct: 148 VFTW*YVHRRAE*TY*ISCRDALWIDSCSIYSNK*RVGCNVG*IQEL*LWQMSKSAL*RP 327
Query: 749 TMPASWTIRHPSI*YREDILPQV*RHLLPTVQVPRQHRRRILWDNVPSSVPDDIRAPQAT 928
TMP+SW + H S * E++LP+V*R LL +Q+ +QH R +LWDNV S V DD+ +A
Sbjct: 328 TMPSSWPVGHSSF**CENLLPKV*RSLLSEIQISKQH*RGVLWDNVSSLVSDDLPTFEAP 507
Query: 929 EXXXXXXXXXXWLQ 970
E WLQ
Sbjct: 508 ETVTAVRTQGFWLQ 549
Score = 134 bits (287), Expect = 1e-030
Identities = 79/187 (42%), Positives = 87/187 (46%)
Frame = -3 / -3
Query: 984 MACGA*SQRHEEHXXXXXXXXXXXXXXXGTDEGTLSQSMRRRCCLGTWTVGSRCLHTWGS 805
MA *SQ+ T E TLSQS R+CC W SR LHT GS
Sbjct: 563 MAYEV*SQKPWVRTAVTVSGASNVGRSSETSEETLSQSTPRQCCFDIWISDSRDLHTLGS 384
Query: 804 ISSRY*IDGCLIVQLAGMVDHSSKHAGTAQSHSSYTSPALQPVLYWSECIVHGSAHKASL 625
S Y* + C QL GMV S QSHSS P LQP LY E I H S HKASL
Sbjct: 383 KFSHY*NEECPTGQLEGMVGRYSALLDICQSHSSCIYPTLQPTLYLLEYIEHESIHKASL 204
Query: 624 QLILRAHFVPQ*TYHHEMIQYLK*DREHNHNKELGC*GHKG*SRLECXXXXXXXXXXXXX 445
QLI H *TYHH ++ * +EH HN EL H+ *+RL C
Sbjct: 203 QLIQ*VHSALL*TYHHVKTRHPI*GQEHIHNMELDRLAHRD*NRLVCNRHQLHRRTHCPA 24
Query: 444 SCNTMKS 424
S TMKS
Sbjct: 23 SYRTMKS 3
Score = 132 bits (283), Expect = 4e-030
Identities = 60/107 (56%), Positives = 72/107 (67%)
Frame = +1 / +3
Query: 577 MVICSLRNKMSSENQLQRCFMG*SMHDTF*PVKDWLQCWRSIRTMTLGGARVFTAVVNHA 756
MVICS +++M+ NQLQRCFM * M D F* VK WLQCW + RTMTL + T NHA
Sbjct: 156 MVICSQKSRMNLLNQLQRCFMD*FMFDIF*QVKGWLQCWINTRTMTLADVQECTVAANHA 335
Query: 757 CQLDNQTSIDLVP*RYTAPSVKTSTTHGPSTKATSTAHTLGQRSLIC 897
QL ++T + LV *++TA SVK ST P+ KAT T TLGQR L C
Sbjct: 336 FQLASRTFLVLVM*KFTAQSVKISTIRDPNIKATLTGRTLGQRFLTC 476
Score = 67.0 bits (140), Expect(2) = 2e-056
Identities = 35/57 (61%), Positives = 37/57 (64%)
Frame = -2 / -2
Query: 592 VNISP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIH 422
VNISP +DS S +RSRA S* GT L PQRLK SQKNS P KLQ HEIH
Sbjct: 171 VNISPCEDSTSNIRSRAYS*YGT*PLSPQRLKSSCM*SSSTSQKNSLPRKLQNHEIH 1
Score = 43.2 bits (88), Expect(2) = 3e-047
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -1 / -1
Query: 527 NLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NP 423
NL A T++E+VL V++I+FTEELI P*NP
Sbjct: 106 NLTA*PTEIEIVLYVIVINFTEELIAPQATEP*NP 2
Score = 26.3 bits (51), Expect(2) = 1e-035
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +2 / +1
Query: 422 VDFMVLQLKRE*VLL*SR**LH 487
VDFMVL L +*VLL*S * LH
Sbjct: 1 VDFMVL*LAGQ*VLL*S**RLH 66
>gb|BF265822.1|BF265822 HV_CEa0013G21f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013G21f, mRNA sequence
Length = 768
Score = 334 bits (724), Expect(3) = e-112
Identities = 135/164 (82%), Positives = 137/164 (83%)
Frame = +3 / +3
Query: 330 SSIPKGRCXXXXXXXXXXXXXXXXXXXXXTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 509
SSIPKGRC TSWISWYCNLRGNEFFCEVDDDYIQDDFNLC
Sbjct: 207 SSIPKGRCSEGESESDSEASDVGGSDGEDTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 386
Query: 510 GLSSQVPYYDYALDLILDIESSHGDMFTEEQNELGESAAEMLYGLIHARYILTSKGLAAM 689
GLSSQVPYYDYALDLILDIESSHGD+FTEEQNEL ESAAEMLYGLIHARYILTSKGLAAM
Sbjct: 387 GLSSQVPYYDYALDLILDIESSHGDIFTEEQNELVESAAEMLYGLIHARYILTSKGLAAM 566
Query: 690 LEKYKNYDFGRCPRVYCCGQPCLPVGQSDIHRSSTVKIYCPKCE 821
LEKYKNYDFGRCPRVYCCG PCLP+GQSDIHRSST K Y PK E
Sbjct: 567 LEKYKNYDFGRCPRVYCCGTPCLPIGQSDIHRSSTRKDYWPKGE 698
Score = 217 bits (468), Expect(3) = 4e-061
Identities = 107/164 (65%), Positives = 112/164 (68%)
Frame = -2 / -3
Query: 820 SHLGQYIFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSIAASPLLVRMYRAWXX 641
S LGQ F VLDR +SDCP GRHG PQQ*TRGHRPKS*FLYFSSIAA+PLLVRMYRA
Sbjct: 697 SPLGQ*SFLVLDR*ISDCPIGRHGVPQQ*TRGHRPKS*FLYFSSIAANPLLVRMYRA*IS 518
Query: 640 XXXXXXXXXXXXXXXSVNISP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQK 461
SV ISP +DSISKMRSRA*S* GT LL PQRLK SQK
Sbjct: 517 PYNISAADSTSSFCSSVKISPWEDSISKMRSRA*S*YGT*LLSPQRLKSS*M*SSSTSQK 338
Query: 460 NSFPLKLQYHEIHEVSSPSEPLTXXXXXXXXXXXXEQRPLGMDD 329
NSFPL+LQYHEIHEVSSPSEP T EQRPLGM+D
Sbjct: 337 NSFPLRLQYHEIHEVSSPSEPPTSDASLSDSDSPSEQRPLGMED 206
Score = 166 bits (357), Expect = 3e-040
Identities = 77/127 (60%), Positives = 80/127 (62%)
Frame = -3 / -1
Query: 798 SRY*IDGCLIVQLAGMVDHSSKHAGTAQSHSSYTSPALQPVLYWSECIVHGSAHKASLQL 619
S Y*I LIVQL GMV HS+KH QS SS SPA QP LYWSECIVH SAH S QL
Sbjct: 675 SLY*IGEYLIVQLVGMVSHSNKHVDIVQSRSSCISPA*QPTLYWSECIVHESAHTTSQQL 496
Query: 618 ILRAHFVPQ*TYHHEMIQYLK*DREHNHNKELGC*GHKG*SRLECXXXXXXXXXXXXXSC 439
I AHFV * YHH +YLK*D+EHNHN EL C* HK *S LEC C
Sbjct: 495 IPLAHFVLL*KYHHGKTRYLK*DQEHNHNMELDC*AHKD*SHLECNHHRLHRRTHSLLGC 316
Query: 438 NTMKSTR 418
NTMKS R
Sbjct: 315 NTMKSMR 295
Score = 134 bits (288), Expect(3) = 2e-056
Identities = 54/85 (63%), Positives = 62/85 (72%)
Frame = +2 / +2
Query: 554 HFRY*IISW*YVH*GTK*ARRISCRDALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPAC 733
HFRY + W*Y H TK*A ISC D +WAD CTIHSDQ*R GC AGE+ EL LW + C
Sbjct: 431 HFRYRVFPW*YFHRRTK*ASGISC*DVVWADSCTIHSDQ*RVGCYAGEIQELRLWTMSTC 610
Query: 734 LLLWSTMPASWTIRHPSI*YREDIL 808
LLLW TMP +WTIR+ I*Y+E +L
Sbjct: 611 LLLWDTMPTNWTIRYSPI*YKERLL 685
Score = 127 bits (271), Expect(4) = 2e-074
Identities = 54/65 (83%), Positives = 61/65 (93%)
Frame = -1 / -2
Query: 527 NLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIRLPFGAA 348
NL A+ TK+EV+LNV+IIDFTEELIPS*VAIP*NP G+FSIRATNI*CFT+R+ LPFGAA
Sbjct: 404 NLTAKPTKIEVILNVIIIDFTEELIPS*VAIP*NP*GIFSIRATNI*CFTVRL*LPFGAA 225
Query: 347 ALGDG 333
ALGDG
Sbjct: 224 ALGDG 210
Score = 115 bits (246), Expect(4) = 2e-074
Identities = 51/82 (62%), Positives = 60/82 (73%)
Frame = -1 / -2
Query: 821 FTLGAVYLHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQHCSQSFTGQNVSCMDQ 642
F L V TRS+++*LSNW AW TA+NT KV+VL+ LQH SQ FTGQNVSCM+Q
Sbjct: 698 FALRPVIFPCTRSVNI*LSNW*AWCPTAINTWTSSKVVVLVFLQHSSQPFTGQNVSCMNQ 519
Query: 641 PIKHLCS*FSELILFLSEHITM 576
PI+HL S*F LILF E+ITM
Sbjct: 518 PIQHLSS*FH*LILFFCENITM 453
Score = 106 bits (226), Expect(2) = 4e-033
Identities = 50/82 (60%), Positives = 54/82 (65%)
Frame = +1 / +1
Query: 577 MVICSLRNKMSSENQLQRCFMG*SMHDTF*PVKDWLQCWRSIRTMTLGGARVFTAVVNHA 756
MVI S +NKMS NQL RC MG* MHDTF*PVK WL CWR+ RT TL VF AV +HA
Sbjct: 454 MVIFSQKNKMS*WNQLLRCCMG*FMHDTF*PVKGWLLCWRNTRTTTLDDVHVFIAVGHHA 633
Query: 757 CQLDNQTSIDLVP*RYTAPSVK 822
QLDNQ DLV + T K
Sbjct: 634 YQLDNQIFTDLVQGKITGLRAK 699
Score = 83.1 bits (175), Expect(3) = 2e-056
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +2 / +2
Query: 341 QGPLLRRGV*F***SIRC*WL*WRRHLVDFMVLQLKRE*VLL*SR**LH 487
QGPLLRRGV *SIRC WL*WRR+L+DFMVLQ KRE*VLL*SR**LH
Sbjct: 218 QGPLLRRGVRVGQ*SIRCWWL*WRRYLMDFMVLQPKRE*VLL*SR**LH 364
Score = 76.2 bits (160), Expect(3) = e-112
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +3
Query: 174 GAGVGAGLDRKRISDALDKHLEKAVASPSTSRGSAGGGGVRD 299
G+ GAGLDRKRIS+ALDKHLEKA ASPSTSRGSAG G R+
Sbjct: 66 GSAGGAGLDRKRISEALDKHLEKAAASPSTSRGSAGARGNRN 191
Score = 66.1 bits (138), Expect(4) = 2e-074
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -2 / -3
Query: 277 ADPLDVDGDATAFSRCLSSASLIRFRSRPAPTPAP 173
A+PLDV+GDA AFSRCLSSASL+RFRS PAP P
Sbjct: 169 AEPLDVEGDAAAFSRCLSSASLMRFRSSPAPPADP 65
Score = 59.3 bits (123), Expect(2) = 4e-033
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +1
Query: 358 KGSLILIVKHQMLVALMEKTPRGFHGIAT*EG 453
KGS VKHQMLVALMEK P GFHGIAT*EG
Sbjct: 235 KGSQSRTVKHQMLVALMEKIPHGFHGIAT*EG 330
Score = 40.9 bits (83), Expect(3) = 2e-056
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 200 PETDQRRARQAP*EGGRIAVHIEGVSG 280
PE QR AR AP EGGR+A+H+E + G
Sbjct: 92 PEAHQRSAR*APGEGGRVALHVERLGG 172
Score = 35.0 bits (70), Expect(3) = e-112
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3 / +1
Query: 798 KIYCPKCEDIYYPRSKYQGNI 860
KI + +D+YYPRSKYQG+I
Sbjct: 676 KITGLRAKDLYYPRSKYQGSI 738
Score = 34.1 bits (68), Expect(3) = 4e-061
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -1
Query: 267 SMWTAMRPPSQGACLARR*SVSGP 196
S W A RPPS GA A R* SGP
Sbjct: 159 STWRATRPPSPGAYRALR*CASGP 88
Score = 29.5 bits (58), Expect(4) = 2e-074
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 859 MLPWYLDRG**MSSHLGQYIF 797
+LPWYL+RG** S L IF
Sbjct: 737 ILPWYLERG**RSFALRPVIF 675
Score = 23.5 bits (45), Expect(3) = 4e-061
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1 / -1
Query: 860 DVALVLGPWVVDVF 819
D ALV W+V+VF
Sbjct: 738 DTALVFRTWIVEVF 697
>gb|BU990653.1|BU990653 HF25K21r HF Hordeum vulgare subsp. vulgare cDNA clone HF25K21
5-PRIME, mRNA sequence
Length = 674
Score = 355 bits (769), Expect(2) = e-100
Identities = 135/150 (90%), Positives = 147/150 (98%)
Frame = +3 / +2
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+C+LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILDIESS+GD+FTE
Sbjct: 224 TSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNGDVFTE 403
Query: 597 EQNELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLPVGQSD 776
EQNEL ES+AEMLYGLIHARYILTSKGLAAMLEK+KNYDFGRCPRVYCCGQPCLP GQSD
Sbjct: 404 EQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSD 583
Query: 777 IHRSSTVKIYCPKCEDIYYPRSKYQGNIDG 866
I RSSTVK++CPKCED++YPRSKYQGNIDG
Sbjct: 584 IPRSSTVKVFCPKCEDLHYPRSKYQGNIDG 673
Score = 212 bits (458), Expect(2) = 2e-056
Identities = 102/158 (64%), Positives = 108/158 (68%)
Frame = -2 / -3
Query: 865 PSMLPWYLDRG**MSSHLGQYIFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSI 686
PSMLPWYLD G* SSH GQ FTVLD MSDCP GR G PQQ TRGH PKS*FL FS+I
Sbjct: 672 PSMLPWYLDLG*CKSSHFGQNTFTVLDLGMSDCPAGRQGWPQQYTRGHLPKS*FLNFSNI 493
Query: 685 AASPLLVRMYRAWXXXXXXXXXXXXXXXXXSVNISP*DDSISKMRSRA*S**GTWLLRPQ 506
AA PLLV+MYRAW SVN SP +DS+S+MRS A*S* GT LLRPQ
Sbjct: 492 AARPLLVKMYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMRSSA*S*YGT*LLRPQ 313
Query: 505 RLKXXXXXXXXXSQKNSFPLKLQYHEIHEVSSPSEPLT 392
RLK SQKNS P KLQ HEI +VSSPSEPLT
Sbjct: 312 RLKSSCI*SSSISQKNSLPRKLQNHEIQDVSSPSEPLT 199
Score = 107 bits (229), Expect(2) = 4e-027
Identities = 46/102 (45%), Positives = 66/102 (64%)
Frame = +2 / +1
Query: 554 HFRY*IISW*YVH*GTK*ARRISCRDALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPAC 733
H R+*+ W* +H*G K* + CRDA+W +PCT+H + + CN +V EL* W +P+
Sbjct: 361 HPRH*VF*W*CIH*GAK*IN*VICRDAVWFNPCTVHLN*QGSSCNVRKVQEL*FWQMPSS 540
Query: 734 LLLWSTMPASWTIRHPSI*YREDILPQV*RHLLPTVQVPRQH 859
+LLW + +S IRH + + E +L ++*R L VQVPRQH
Sbjct: 541 ILLWPALSSSRAIRHS*VKHSEGVLSKM*RLTLSKVQVPRQH 666
Score = 102 bits (217), Expect(2) = 1e-031
Identities = 48/98 (48%), Positives = 64/98 (65%)
Frame = -1 / -2
Query: 866 AVDVALVLGPWVVDVFTLGAVYLHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQH 687
+++VALVLGPW+V VFT +LH +V*L W+ L TAV +RA K+I+L L H
Sbjct: 673 SINVALVLGPWIV*VFTFWTKHLHCA*PRNV*LPCWKTGLATAVYSRASAKIIILELF*H 494
Query: 686 CSQSFTGQNVSCMDQPIKHLCS*FSELILFLSEHITMR 573
CS + +V CMD I+HLC * + IL LSE+IT+R
Sbjct: 493 CS*TLAS*DVPCMD*TIQHLCR*LN*FILLLSEYITIR 380
Score = 55.1 bits (114), Expect(2) = 1e-031
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = -1 / -2
Query: 527 NLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTI 375
+L A AT++E++L ++II+ TEE + S P*NPR V S R NI FT+
Sbjct: 334 HLIA*ATEIEIILYIIIINLTEEFVASQATEP*NPRCVLSFRTANIRIFTV 182
Score = 34.5 bits (69), Expect(2) = 4e-027
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +2 / +1
Query: 350 LLRRGV*F***SIRC*WL*WRRHLVDFMVLQLKRE*VLL*SR**LH 487
L RRG+ * * C* * R H++DFMVL L R+ +LL* **L+
Sbjct: 157 LRRRGIRN*Q*RF*C*RF*RRGHILDFMVL*LARQRILL*D***LY 294
Score = 33.1 bits (66), Expect(2) = e-100
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3 / +2
Query: 180 GVGAGLDRKRISDALDKHLEKAVASPS 260
G A +DRKRI +AL+KH E+ S S
Sbjct: 2 GGAAEMDRKRIKEALEKHTERPSPSTS 82
Score = 30.9 bits (61), Expect(2) = 2e-056
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -2 / -3
Query: 253 DATAFSRCLSSASLIRFRSRPAPTP 179
D S C SSASL+RFRS A P
Sbjct: 75 DGDGLSVCFSSASLMRFRSISAAPP 1
>gb|AV917174.1|AV917174 AV917174 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8d05 5', mRNA sequence
Length = 623
Score = 352 bits (762), Expect(2) = 1e-099
Identities = 139/163 (85%), Positives = 141/163 (86%)
Frame = +3 / +1
Query: 330 SSIPKGRCXXXXXXXXXXXXXXXXXXXXXTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 509
SSIPKGRC TSWISWYCNLRGNEFFCEVDDDYIQDDFNLC
Sbjct: 133 SSIPKGRCSEGESESDSEASDVGGSDGEDTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 312
Query: 510 GLSSQVPYYDYALDLILDIESSHGDMFTEEQNELGESAAEMLYGLIHARYILTSKGLAAM 689
GLSSQVPYYDYALDLILDIESSHGD+FTEEQNEL ESAAEMLYGLIHARYILTSKGLAAM
Sbjct: 313 GLSSQVPYYDYALDLILDIESSHGDIFTEEQNELVESAAEMLYGLIHARYILTSKGLAAM 492
Query: 690 LEKYKNYDFGRCPRVYCCGQPCLPVGQSDIHRSSTVKIYCPKC 818
LEKYKNYDFGRCPRVYCCGQPCLP+GQSDIHRSSTVKIYCPKC
Sbjct: 493 LEKYKNYDFGRCPRVYCCGQPCLPIGQSDIHRSSTVKIYCPKC 621
Score = 232 bits (501), Expect(2) = 1e-064
Identities = 111/164 (67%), Positives = 116/164 (70%)
Frame = -2 / -1
Query: 820 SHLGQYIFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSIAASPLLVRMYRAWXX 641
SHLGQYIFTVLDR +SDCP GRHG PQQ*TRGHRPKS*FLYFSSIAA+PLLVRMYRA
Sbjct: 623 SHLGQYIFTVLDR*ISDCPIGRHGCPQQ*TRGHRPKS*FLYFSSIAANPLLVRMYRA*IS 444
Query: 640 XXXXXXXXXXXXXXXSVNISP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQK 461
SV ISP +DSISKMRSRA*S* GT LL PQRLK SQK
Sbjct: 443 PYNISAADSTSSFCSSVKISPWEDSISKMRSRA*S*YGT*LLSPQRLKSS*M*SSSTSQK 264
Query: 460 NSFPLKLQYHEIHEVSSPSEPLTXXXXXXXXXXXXEQRPLGMDD 329
NSFPL+LQYHEIHEVSSPSEP T EQRPLGM+D
Sbjct: 263 NSFPLRLQYHEIHEVSSPSEPPTSDASLSDSDSPSEQRPLGMED 132
Score = 170 bits (366), Expect = 1e-041
Identities = 80/130 (61%), Positives = 83/130 (63%)
Frame = -3 / -2
Query: 807 SISSRY*IDGCLIVQLAGMVDHSSKHAGTAQSHSSYTSPALQPVLYWSECIVHGSAHKAS 628
SISS Y*I LIVQL GMV HS+KH QS SS SPA QP LYWSECIVH SAH S
Sbjct: 610 SISSLY*IGEYLIVQLVGMVVHSNKHVDIVQSRSSCISPA*QPTLYWSECIVHESAHTTS 431
Query: 627 LQLILRAHFVPQ*TYHHEMIQYLK*DREHNHNKELGC*GHKG*SRLECXXXXXXXXXXXX 448
QLI AHFV * YHH +YLK*D+EHNHN EL C* HK *S LEC
Sbjct: 430 QQLIPLAHFVLL*KYHHGKTRYLK*DQEHNHNMELDC*AHKD*SHLECNHHRLHRRTHSL 251
Query: 447 XSCNTMKSTR 418
CNTMKS R
Sbjct: 250 LGCNTMKSMR 221
Score = 138 bits (296), Expect(3) = 5e-052
Identities = 56/85 (65%), Positives = 63/85 (74%)
Frame = +2 / +3
Query: 554 HFRY*IISW*YVH*GTK*ARRISCRDALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPAC 733
HFRY + W*Y H TK*A ISC D +WAD CTIHSDQ*R GC AGE+ EL LW + C
Sbjct: 357 HFRYRVFPW*YFHRRTK*ASGISC*DVVWADSCTIHSDQ*RVGCYAGEIQELRLWTMSTC 536
Query: 734 LLLWSTMPASWTIRHPSI*YREDIL 808
LLLW+TMP +WTIR+ I*Y EDIL
Sbjct: 537 LLLWTTMPTNWTIRYSPI*YSEDIL 611
Score = 127 bits (271), Expect(3) = 8e-062
Identities = 54/65 (83%), Positives = 61/65 (93%)
Frame = -1 / -3
Query: 527 NLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIRLPFGAA 348
NL A+ TK+EV+LNV+IIDFTEELIPS*VAIP*NP G+FSIRATNI*CFT+R+ LPFGAA
Sbjct: 330 NLTAKPTKIEVILNVIIIDFTEELIPS*VAIP*NP*GIFSIRATNI*CFTVRL*LPFGAA 151
Query: 347 ALGDG 333
ALGDG
Sbjct: 150 ALGDG 136
Score = 126 bits (270), Expect(3) = 8e-062
Identities = 54/80 (67%), Positives = 64/80 (80%)
Frame = -1 / -3
Query: 815 LGAVYLHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQHCSQSFTGQNVSCMDQPI 636
L VYLH TRS+++*LSNW AWL+TA+NT KV+VL+ LQH SQ FTGQNVSCM+QPI
Sbjct: 618 LRTVYLHCTRSVNI*LSNW*AWLSTAINTWTSSKVVVLVFLQHSSQPFTGQNVSCMNQPI 439
Query: 635 KHLCS*FSELILFLSEHITM 576
+HL S*F LILF E+ITM
Sbjct: 438 QHLSS*FH*LILFFCENITM 379
Score = 116 bits (247), Expect(2) = 4e-036
Identities = 54/80 (67%), Positives = 56/80 (70%)
Frame = +1 / +2
Query: 577 MVICSLRNKMSSENQLQRCFMG*SMHDTF*PVKDWLQCWRSIRTMTLGGARVFTAVVNHA 756
MVI S +NKMS NQL RC MG* MHDTF*PVK WL CWR+ RT TL VF AV NHA
Sbjct: 380 MVIFSQKNKMS*WNQLLRCCMG*FMHDTF*PVKGWLLCWRNTRTTTLDDVHVFIAVDNHA 559
Query: 757 CQLDNQTSIDLVP*RYTAPS 816
QLDNQ DLV *RYT S
Sbjct: 560 YQLDNQIFTDLVQ*RYTVLS 619
Score = 83.1 bits (175), Expect(3) = 5e-052
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +2 / +3
Query: 341 QGPLLRRGV*F***SIRC*WL*WRRHLVDFMVLQLKRE*VLL*SR**LH 487
QGPLLRRGV *SIRC WL*WRR+L+DFMVLQ KRE*VLL*SR**LH
Sbjct: 144 QGPLLRRGVRVGQ*SIRCWWL*WRRYLMDFMVLQPKRE*VLL*SR**LH 290
Score = 59.3 bits (123), Expect(2) = 4e-036
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +2
Query: 358 KGSLILIVKHQMLVALMEKTPRGFHGIAT*EG 453
KGS VKHQMLVALMEK P GFHGIAT*EG
Sbjct: 161 KGSQSRTVKHQMLVALMEKIPHGFHGIAT*EG 256
Score = 35.4 bits (71), Expect(2) = 1e-064
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -2 / -2
Query: 268 LDVDGDATAFSRCLSSASLIRFRSRPAP 185
LDV+GDA A + L SL+R R PAP
Sbjct: 85 LDVEGDAAAXXQVLIERSLMRXRXSPAP 2
Score = 32.7 bits (65), Expect(2) = 1e-099
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +3 / +3
Query: 186 GAGLDRKRISDALDKHLEKAVASPSTSRGSAG 281
GAGL R RIS+ KA ASPSTS G
Sbjct: 3 GAGLXRXRISERSISTWXKAAASPSTSXRLGG 98
Score = 23.5 bits (45), Expect(3) = 8e-062
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3 / -3
Query: 267 SMWTAMRPPSQGACLARR*SVSGP 196
S W A RPP + R* GP
Sbjct: 84 STWRATRPPXXRCLSSVR*CAXGP 13
Score = 22.6 bits (43), Expect(3) = 5e-052
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2 / +2
Query: 200 PETDQRRARQAP*EGGRIAVHIE 268
P QR + GGR+A+H+E
Sbjct: 17 PXAHQRTLDKHLXXGGRVALHVE 85
>gb|BU972271.1|BU972271 HB21C19r BC Hordeum vulgare subsp. vulgare cDNA clone HB21C19
5-PRIME, mRNA sequence
Length = 526
Score = 347 bits (751), Expect(2) = 6e-098
Identities = 134/148 (90%), Positives = 141/148 (95%)
Frame = +3 / +1
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+C+LRGNEFFCEVDDDYIQDDFNLCGLS QVPYY+YALDLILD+ESSHGDMFTE
Sbjct: 82 TSWISWFCSLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYEYALDLILDVESSHGDMFTE 261
Query: 597 EQNELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLPVGQSD 776
EQNEL ESAAEMLYGLIH RYILTSKGLAAML+KYKNYDFGRCPRV+C GQPCLPVGQSD
Sbjct: 262 EQNELIESAAEMLYGLIHVRYILTSKGLAAMLDKYKNYDFGRCPRVHCSGQPCLPVGQSD 441
Query: 777 IHRSSTVKIYCPKCEDIYYPRSKYQGNI 860
I RSS VKIYCPKCED+YYPRSKYQ NI
Sbjct: 442 IPRSSNVKIYCPKCEDLYYPRSKYQSNI 525
Score = 123 bits (264), Expect(2) = 3e-047
Identities = 52/95 (54%), Positives = 69/95 (72%)
Frame = -1 / -2
Query: 860 DVALVLGPWVVDVFTLGAVYLHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQHCS 681
+VAL+ G +V++FTL AV H TR+ +V L+NW+AWL V++ KVIVL+ +QHCS
Sbjct: 525 NVALIFGSRIVEIFTLWAVNFHITRTRNVRLANWKAWLAATVHSWTSAKVIVLVFIQHCS 346
Query: 680 QSFTGQNVSCMDQPIKHLCS*FSELILFLSEHITM 576
Q FT N+S M+Q IKHLCS*F++ IL EHITM
Sbjct: 345 QPFTC*NISNMNQSIKHLCS*FNKFILLFCEHITM 241
Score = 121 bits (258), Expect = 1e-026
Identities = 67/147 (45%), Positives = 74/147 (50%)
Frame = -3 / -1
Query: 861 RCCLGTWTVGSRCLHTWGSISSRY*IDGCLIVQLAGMVDHSSKHAGTAQSHSSYTSPALQ 682
+CC W SR LHT GS S Y* + C QL GMV S QSHSS P LQ
Sbjct: 526 QCCFDIWISDSRDLHTLGSKFSHY*NEECPTGQLEGMVGRYSALLDICQSHSSCIYPTLQ 347
Query: 681 PVLYWSECIVHGSAHKASLQLILRAHFVPQ*TYHHEMIQYLK*DREHNHNKELGC*GHKG 502
P LY E I H S HKASLQLI H *TYHH ++ * +EH HN EL H+
Sbjct: 346 PTLYLLEYIEHESIHKASLQLIQ*VHSALL*TYHHVKTRHPI*GQEHIHNMELDRLAHRD 167
Query: 501 *SRLECXXXXXXXXXXXXXSCNTMKST 421
*+RL C S TMKST
Sbjct: 166 *NRLVCNRHQLHRRTHCPASYRTMKST 86
Score = 115 bits (245), Expect(2) = 3e-032
Identities = 52/94 (55%), Positives = 64/94 (68%)
Frame = +1 / +2
Query: 577 MVICSLRNKMSSENQLQRCFMG*SMHDTF*PVKDWLQCWRSIRTMTLGGARVFTAVVNHA 756
MVICS +++M+ NQLQRCFM * M D F* VK WLQCW + RTMTL + T NHA
Sbjct: 242 MVICSQKSRMNLLNQLQRCFMD*FMFDIF*QVKGWLQCWINTRTMTLADVQECTVAANHA 421
Query: 757 CQLDNQTSIDLVP*RYTAPSVKTSTTHGPSTKAT 858
QL ++T + LV *++TA SVK ST P+ KAT
Sbjct: 422 FQLASRTFLVLVM*KFTAQSVKISTIRDPNIKAT 523
Score = 113 bits (241), Expect = 3e-024
Identities = 49/97 (50%), Positives = 66/97 (68%)
Frame = +2 / +3
Query: 569 IISW*YVH*GTK*ARRISCRDALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPACLLLWS 748
+ +W*YVH +* ISCRDALW D C+I+S++*R GCN G + EL*LW + L
Sbjct: 234 VFTW*YVHRRAE*TY*ISCRDALWIDSCSIYSNK*RVGCNVG*IQEL*LWQMSKSAL*RP 413
Query: 749 TMPASWTIRHPSI*YREDILPQV*RHLLPTVQVPRQH 859
TMP+SW + H S * E++LP+V*R LL +Q+ +QH
Sbjct: 414 TMPSSWPVGHSSF**CENLLPKV*RSLLSEIQISKQH 524
Score = 107 bits (228), Expect(2) = 2e-037
Identities = 50/69 (72%), Positives = 55/69 (79%)
Frame = -2 / -3
Query: 859 MLPWYLDRG**MSSHLGQYIFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSIAA 680
ML YLD G** SSH GQ IFT+L+R MSD PTGRHG P Q T GH PKS*FLY S+IAA
Sbjct: 524 MLL*YLDLG**RSSHFGQ*IFTLLERGMSDWPTGRHGWPLQCTLGHLPKS*FLYLSNIAA 345
Query: 679 SPLLVRMYR 653
+PLLVR+YR
Sbjct: 344 NPLLVRIYR 318
Score = 85.8 bits (181), Expect(2) = 3e-047
Identities = 43/66 (65%), Positives = 46/66 (69%)
Frame = -2 / -3
Query: 592 VNISP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVS 413
VNISP +DS S +RSRA S* GT L PQRLK SQKNS P KLQ HEIH+VS
Sbjct: 257 VNISPCEDSTSNIRSRAYS*YGT*PLSPQRLKSSCM*SSSTSQKNSLPRKLQNHEIHDVS 78
Query: 412 SPSEPL 395
SPSEPL
Sbjct: 77 SPSEPL 60
Score = 72.1 bits (151), Expect(2) = 2e-037
Identities = 32/62 (51%), Positives = 42/62 (67%)
Frame = -1 / -2
Query: 527 NLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIRLPFGAA 348
NL A T++E+VL V++I+FTEELI P*NPR +FSIR T +* FT+ +R G
Sbjct: 192 NLTA*PTEIEIVLYVIVINFTEELIAPQATEP*NPRCIFSIRTTQV*FFTVSVRFSIGQL 13
Query: 347 AL 342
AL
Sbjct: 12 AL 7
Score = 44.6 bits (91), Expect(2) = 3e-032
Identities = 27/49 (55%), Positives = 33/49 (67%)
Frame = +2 / +3
Query: 341 QGPLLRRGV*F***SIRC*WL*WRRHLVDFMVLQLKRE*VLL*SR**LH 487
+G +R + * * IR W *WRR++VDFMVL L +*VLL*S * LH
Sbjct: 6 RGQAVRWRIGH*Q*RIRPEWF*WRRYIVDFMVL*LAGQ*VLL*S**RLH 152
Score = 32.2 bits (64), Expect(2) = 6e-098
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 373 LIVKHQMLVALMEKTPRGFHG 435
L VK+Q V LMEK RGFHG
Sbjct: 38 LTVKNQT*VVLMEKIHRGFHG 100
>gb|BQ465058.1|BQ465058 HU02I12r HU Hordeum vulgare subsp. vulgare cDNA clone HU02I12
5-PRIME, mRNA sequence
Length = 659
Score = 357 bits (774), Expect = 8e-098
Identities = 136/177 (76%), Positives = 158/177 (89%)
Frame = +3 / +1
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
T WI+W+C +RGNEFF EVDDDYIQDDFNLCGLS+QVPYYD+ALDLILD+E D+F +
Sbjct: 127 TFWINWFCAMRGNEFFAEVDDDYIQDDFNLCGLSAQVPYYDHALDLILDLEPVQEDVFAD 306
Query: 597 EQNELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLPVGQSD 776
+QNEL ++AEMLYGLIHARYILT+KGLAAMLEK+KN DFGRCPRV C GQPCLP+GQSD
Sbjct: 307 DQNELVVASAEMLYGLIHARYILTTKGLAAMLEKFKNCDFGRCPRVSCSGQPCLPMGQSD 486
Query: 777 IHRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYEHLKPQKLSQRY 947
I R+STVKIYCPKCED+YYPRSK+Q N DGAYFGTTFPH+F+MT+ LKPQK +Q+Y
Sbjct: 487 IARTSTVKIYCPKCEDLYYPRSKHQANTDGAYFGTTFPHMFMMTHSQLKPQKPAQQY 657
Score = 209 bits (450), Expect = 4e-053
Identities = 103/180 (57%), Positives = 111/180 (61%)
Frame = -2 / -1
Query: 940 CESFCGLRCSYVIRNR*GNVVPKYAPSMLPWYLDRG**MSSHLGQYIFTVLDRWMSDCPT 761
C FCG C +VI N *GNVVPKYAPS+L W D G** SSHLGQYI TVL +SD P
Sbjct: 650 CAGFCGFNCEWVIMNI*GNVVPKYAPSVLAWCFDLG**RSSHLGQYILTVLVLAISDWPI 471
Query: 760 GRHG*PQQ*TRGHRPKS*FLYFSSIAASPLLVRMYRAWXXXXXXXXXXXXXXXXXSVNIS 581
GR G P+Q TRGH PKS FL FSSIAA PL+V+MYRAW S N S
Sbjct: 470 GRQGWPEQDTRGHLPKSQFLNFSSIAAKPLVVKMYRAWIKP*SISADATTSSFWSSANTS 291
Query: 580 P*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVSSPSE 401
S S+MRSRA S**GTW LRPQRLK S KNS PL Q I +VSS SE
Sbjct: 290 SWTGSRSRMRSRAWS**GTWALRPQRLKSSWM*SSSTSAKNSLPLMAQNQLIQKVSSASE 111
Score = 131 bits (280), Expect(2) = 2e-037
Identities = 57/124 (45%), Positives = 79/124 (63%)
Frame = -1 / -3
Query: 947 IALRELLWLEVLVCHQEQMRERCPKVCAVDVALVLGPWVVDVFTLGAVYLHGTRSMDV*L 768
+ LR LLWL++ V H E MR+R PKVC V + LVL WVV++F A+YL GT D+ L
Sbjct: 657 VLLRWLLWLQL*VGHHEHMRKRRPKVCXVCIGLVLRSWVVEIFAFRAIYLDGTGPSDIGL 478
Query: 767 SNWQAWLTTAVNTRAPPKVIVLILLQHCSQSFTGQNVSCMDQPIKHLCS*FSELILFLSE 588
++W+ L A AP KV VL LLQHC Q+ + Q+V +DQ +KHL ++ IL + +
Sbjct: 477 AHWKTGLARAGYAGAPSKVTVLELLQHCRQALSSQDVPGVDQTVKHLRGRDNQFILVIGK 298
Query: 587 HITM 576
HI +
Sbjct: 297 HILL 286
Score = 107 bits (229), Expect = 1e-022
Identities = 51/101 (50%), Positives = 65/101 (64%)
Frame = +2 / +3
Query: 629 DALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPACLLLWSTMPASWTIRHPSI*YREDIL 808
DAL DP +H D * G NAGEV EL*LW VP +LLW + ++ +R+ YR+DIL
Sbjct: 339 DALRFDPRPVHLDY*GLGGNAGEVQEL*LWKVPPRILLWPALSSNGPVRYR*DQYRQDIL 518
Query: 809 PQV*RHLLPTVQVPRQHRRRILWDNVPSSVPDDIRAPQATE 931
P + R LLP ++ P Q+RR ILWD+V S V DD +ATE
Sbjct: 519 P*MRRSLLPKIEAPSQYRRXILWDDVSSYVHDDPLTVEATE 641
Score = 46.0 bits (94), Expect(2) = 2e-037
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = -1 / -3
Query: 527 NLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIR 402
+L AEA +VEVVL+VV++D EEL+ A P +P GV +R
Sbjct: 237 DLGAEAAEVEVVLDVVVVDLGEELVAPHGAEPVDPEGVVRLR 112
>gb|CV062418.1|CV062418 BNEL79g9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL79g9 5' similar to possible
protein kinase CK2 regulatory subunit, mRNA sequence
Length = 700
Score = 331 bits (717), Expect = 6e-090
Identities = 129/136 (94%), Positives = 133/136 (97%)
Frame = +3 / -1
Query: 579 GDMFTEEQNELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCL 758
GD+FTEEQNEL ES AEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCL
Sbjct: 700 GDIFTEEQNELVESPAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCL 521
Query: 759 PVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYEHLKPQKLS 938
P+GQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNIDGAY+GTTFPHLFLMTY+HLKPQK S
Sbjct: 520 PIGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYYGTTFPHLFLMTYDHLKPQKTS 341
Query: 939 QRYVPRVFGFKLHKP* 986
QRYVPRVFGFKLHKP*
Sbjct: 340 QRYVPRVFGFKLHKP* 293
Score = 226 bits (489), Expect = 2e-058
Identities = 98/112 (87%), Positives = 102/112 (91%)
Frame = -2 / +3
Query: 985 HGLWSLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSMLPWYLDRG**MSSHLGQ 806
HGLWSLKP TRGT*RCE F GLR SYVIR R*GNVVP APS+LPWYL+RG**MSSHLGQ
Sbjct: 294 HGLWSLKPNTRGT*RCEVFWGLR*SYVIRKR*GNVVP**APSILPWYLERG**MSSHLGQ 473
Query: 805 YIFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSIAASPLLVRMYRA 650
YIFTVLDR +SDCP GRHG PQQ*TRGHRPKS*FLYFSSIAA+PLLVRMYRA
Sbjct: 474 YIFTVLDR*ISDCPIGRHGCPQQ*TRGHRPKS*FLYFSSIAANPLLVRMYRA 629
Score = 200 bits (432), Expect = 1e-050
Identities = 88/136 (64%), Positives = 107/136 (78%)
Frame = -1 / +2
Query: 986 SWLVELEAKDTRNIALRELLWLEVLVCHQEQMRERCPKVCAVDVALVLGPWVVDVFTLGA 807
SWLVELEAK TRNIALR LL LEV+V HQ+++R+ CP V +V++ALV W+VDVF L
Sbjct: 293 SWLVELEAKYTRNIALRGLLGLEVIVRHQKKVRKCCPIVGSVNIALVFRTWIVDVFALRT 472
Query: 806 VYLHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQHCSQSFTGQNVSCMDQPIKHL 627
VYLH TRS+++*LSNW AWL+TA+NT KV+VL+ LQH SQ FTGQNVSCM+Q I+HL
Sbjct: 473 VYLHCTRSVNI*LSNW*AWLSTAINTWTSSKVVVLVFLQHSSQPFTGQNVSCMNQXIQHL 652
Query: 626 CS*FSELILFLSEHIT 579
*F LILF E+IT
Sbjct: 653 SR*FH*LILFFCENIT 700
Score = 184 bits (397), Expect = 8e-046
Identities = 78/135 (57%), Positives = 92/135 (68%)
Frame = +2 / -3
Query: 581 *YVH*GTK*ARRISCRDALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPACLLLWSTMPA 760
*Y H TK*A I+C D +W D CTIHSDQ*R GC AGE+ EL LW + CLLLW+TMP
Sbjct: 698 *YFHRRTK*ASGITC*DVVWXDSCTIHSDQ*RVGCYAGEIQELRLWTMSTCLLLWTTMPT 519
Query: 761 SWTIRHPSI*YREDILPQV*RHLLPTVQVPRQHRRRILWDNVPSSVPDDIRAPQATEXXX 940
+WTIR+ I*Y EDIL V RHLL T +PRQ+ R +LWDN+ S DD+R+PQA +
Sbjct: 518 NWTIRYSPI*YSEDILS*VRRHLLSTF*IPRQY*RSLLWDNISSPFSDDVRSPQAPKDLA 339
Query: 941 XXXXXXXWLQAPQAM 985
WLQAPQAM
Sbjct: 338 ALCSSCIWLQAPQAM 294
Score = 151 bits (324), Expect = 9e-036
Identities = 75/139 (53%), Positives = 80/139 (57%)
Frame = -3 / +1
Query: 996 YMRFMACGA*SQRHEEHXXXXXXXXXXXXXXXGTDEGTLSQSMRRRCCLGTWTVGSRCLH 817
++ MACGA*SQ HEEH E LS S R+ CLG V SRCL
Sbjct: 283 HLHVMACGA*SQIHEEHSAARSFGA*GDRTSSEKGEEMLSHSRLRQYCLGI*NVDSRCLR 462
Query: 816 TWGSISSRY*IDGCLIVQLAGMVDHSSKHAGTAQSHSSYTSPALQPVLYWSECIVHGSAH 637
T SISS Y*I LIVQL GMV HS+KH QS SS SPA QP LYWSECIVH S H
Sbjct: 463 T*DSISSLY*IGEYLIVQLVGMVVHSNKHVDIVQSRSSCISPA*QPTLYWSECIVHESXH 642
Query: 636 KASLQLILRAHFVPQ*TYH 580
S Q+I AHFV * YH
Sbjct: 643 TTSQQVIPLAHFVLL*KYH 699
Score = 133 bits (284), Expect(2) = 1e-033
Identities = 64/104 (61%), Positives = 68/104 (65%)
Frame = +1 / -2
Query: 580 VICSLRNKMSSENQLQRCFMG*SMHDTF*PVKDWLQCWRSIRTMTLGGARVFTAVVNHAC 759
VI S +NKMS N L RC M * MHDTF*PVK WL CWR+ RT TL VF AV NHA
Sbjct: 699 VIFSQKNKMS*WNHLLRCCMX*FMHDTF*PVKGWLLCWRNTRTTTLDDVHVFIAVDNHAY 520
Query: 760 QLDNQTSIDLVP*RYTAPSVKTSTTHGPSTKATSTAHTLGQRSL 891
QLDNQ DLV *RYT S KTST H +TKA T T+GQ L
Sbjct: 519 QLDNQIFTDLVQ*RYTVLSAKTSTIHVLNTKAILTEPTMGQHFL 388
Score = 31.3 bits (62), Expect(2) = 1e-033
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1 / -2
Query: 943 AMFLVSLASSSTSHEPHV 996
AMFLV LASSSTSH+ V
Sbjct: 336 AMFLVYLASSSTSHDVEV 283
>gb|BM816745.1|BM816745 HB02D10_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB02D10_T3.ab1 similar to Protein kinase,, mRNA sequence
Length = 848
Score = 233 bits (503), Expect(4) = 2e-085
Identities = 91/96 (94%), Positives = 94/96 (97%)
Frame = +3 / +1
Query: 573 SHGDMFTEEQNELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQP 752
S GD+FTEEQNEL ESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQP
Sbjct: 283 SEGDIFTEEQNELVESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQP 462
Query: 753 CLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNI 860
CLP+GQSDIHRSSTVKIYCPKCEDIYYPRSKYQG+I
Sbjct: 463 CLPIGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGSI 570
Score = 152 bits (327), Expect(5) = 1e-053
Identities = 68/94 (72%), Positives = 72/94 (76%)
Frame = -2 / -1
Query: 859 MLPWYLDRG**MSSHLGQYIFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSIAA 680
+LPWYL+RG**MSSHLGQYIFTVLDR +SDCP GRHG PQQ*TRGHRPKS*FLYFSSIAA
Sbjct: 569 ILPWYLERG**MSSHLGQYIFTVLDR*ISDCPIGRHGCPQQ*TRGHRPKS*FLYFSSIAA 390
Query: 679 SPLLVRMYRAWXXXXXXXXXXXXXXXXXSVNISP 578
+PLLVRMYRA SV ISP
Sbjct: 389 NPLLVRMYRA*ISPYNISAADSTSSFCSSVKISP 288
Score = 146 bits (314), Expect(3) = 9e-039
Identities = 62/94 (65%), Positives = 73/94 (77%)
Frame = -1 / -3
Query: 860 DVALVLGPWVVDVFTLGAVYLHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQHCS 681
D ALV W+VDVF L VYLH TRS+++*LSNW AWL+TA+NT KV+VL+ LQH S
Sbjct: 570 DTALVFRTWIVDVFALRTVYLHCTRSVNI*LSNW*AWLSTAINTWTSSKVVVLVFLQHSS 391
Query: 680 QSFTGQNVSCMDQPIKHLCS*FSELILFLSEHIT 579
Q FTGQNVSCM+QPI+HL S*F LILF E+IT
Sbjct: 390 QPFTGQNVSCMNQPIQHLSS*FH*LILFFCENIT 289
Score = 139 bits (298), Expect(3) = 1e-039
Identities = 60/93 (64%), Positives = 68/93 (73%)
Frame = +2 / +3
Query: 581 *YVH*GTK*ARRISCRDALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPACLLLWSTMPA 760
*Y H TK*A ISC D +WAD CTIHSDQ*R GC AGE+ EL LW + CLLLW+TMP
Sbjct: 291 *YFHRRTK*ASGISC*DVVWADSCTIHSDQ*RVGCYAGEIQELRLWTMSTCLLLWTTMPT 470
Query: 761 SWTIRHPSI*YREDILPQV*RHLLPTVQVPRQH 859
+WTIR+ I*Y EDIL V RHLL T +PRQ+
Sbjct: 471 NWTIRYSPI*YSEDILS*VRRHLLSTF*IPRQY 569
Score = 131 bits (281), Expect = 8e-030
Identities = 62/94 (65%), Positives = 65/94 (69%)
Frame = +1 / +2
Query: 580 VICSLRNKMSSENQLQRCFMG*SMHDTF*PVKDWLQCWRSIRTMTLGGARVFTAVVNHAC 759
VI S +NKMS NQL RC MG* MHDTF*PVK WL CWR+ RT TL VF AV NHA
Sbjct: 290 VIFSQKNKMS*WNQLLRCCMG*FMHDTF*PVKGWLLCWRNTRTTTLDDVHVFIAVDNHAY 469
Query: 760 QLDNQTSIDLVP*RYTAPSVKTSTTHGPSTKATS 861
QLDNQ DLV *RYT S KTST H +TKA S
Sbjct: 470 QLDNQIFTDLVQ*RYTVLSAKTSTIHVLNTKAVS 571
Score = 124 bits (265), Expect = 1e-027
Identities = 60/92 (65%), Positives = 61/92 (66%)
Frame = -3 / -2
Query: 855 CLGTWTVGSRCLHTWGSISSRY*IDGCLIVQLAGMVDHSSKHAGTAQSHSSYTSPALQPV 676
CLG V SRCL T SISS Y*I LIVQL GMV HS+KH QS SS SPA QP
Sbjct: 565 CLGI*NVDSRCLRT*DSISSLY*IGEYLIVQLVGMVVHSNKHVDIVQSRSSCISPA*QPT 386
Query: 675 LYWSECIVHGSAHKASLQLILRAHFVPQ*TYH 580
LYWSECIVH SAH S QLI AHFV * YH
Sbjct: 385 LYWSECIVHESAHTTSQQLIPLAHFVLL*KYH 290
Score = 76.2 bits (160), Expect(4) = 2e-085
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +1
Query: 174 GAGVGAGLDRKRISDALDKHLEKAVASPSTSRGSAGGGGVRD 299
G+ GAGLDRKRIS+ALDKHLEKA ASPSTSRGSAG G R+
Sbjct: 118 GSAGGAGLDRKRISEALDKHLEKAAASPSTSRGSAGARGNRN 243
Score = 66.1 bits (138), Expect(5) = 1e-053
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -2 / -1
Query: 277 ADPLDVDGDATAFSRCLSSASLIRFRSRPAPTPAP 173
A+PLDV+GDA AFSRCLSSASL+RFRS PAP P
Sbjct: 221 AEPLDVEGDAAAFSRCLSSASLMRFRSSPAPPADP 117
Score = 49.2 bits (101), Expect(4) = 2e-085
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +3 / +2
Query: 861 DGAYFGTTFPHLFLMTYEHLKPQK 932
DGAYFGT F H FL T +HLKPQK
Sbjct: 740 DGAYFGTNFXHFFLKTXDHLKPQK 811
Score = 40.9 bits (83), Expect(3) = 1e-039
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 200 PETDQRRARQAP*EGGRIAVHIEGVSG 280
PE QR AR AP EGGR+A+H+E + G
Sbjct: 144 PEAHQRSAR*APGEGGRVALHVERLGG 224
Score = 34.1 bits (68), Expect(3) = 9e-039
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -2
Query: 267 SMWTAMRPPSQGACLARR*SVSGP 196
S W A RPPS GA A R* SGP
Sbjct: 211 STWRATRPPSPGAYRALR*CASGP 140
Score = 28.1 bits (55), Expect(3) = 1e-039
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 863 RRILWDNVPSSVPDDIRAPQA 925
R +LWD + S +D R+PQA
Sbjct: 742 RSLLWDKLXSLFSEDXRSPQA 804
Score = 28.1 bits (55), Expect(5) = 1e-053
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -2 / -3
Query: 931 FCGLRCSYVIRNR*GNVVPKYAPS 860
F GLR S V R +* VPK APS
Sbjct: 810 FWGLR*SXVFRKK*XKFVPK*APS 739
Score = 24.4 bits (47), Expect(5) = 1e-053
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 365 LPFGAAALGDG 333
+ FGAAALGDG
Sbjct: 294 ITFGAAALGDG 262
Score = 24.4 bits (47), Expect(3) = 9e-039
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1 / -2
Query: 929 LWLEVLVCHQEQMRERCPKVCAV 861
L LEV+V Q+++ + CPKV +V
Sbjct: 808 LGLEVIVRLQKKVXKVCPKVGSV 740
Score = 23.1 bits (44), Expect(4) = 2e-085
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +1
Query: 330 SSIPKGRC 353
SSIPKGRC
Sbjct: 259 SSIPKGRC 282
Score = 21.7 bits (41), Expect(5) = 1e-053
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2 / -1
Query: 181 PAPPCLYI 158
PA PCLYI
Sbjct: 128 PADPCLYI 105
>gb|CA014815.1|CA014815 HT12G23r HT Hordeum vulgare subsp. vulgare cDNA clone HT12G23
5-PRIME, mRNA sequence
Length = 649
Score = 301 bits (651), Expect(2) = 3e-084
Identities = 118/130 (90%), Positives = 124/130 (95%)
Frame = +3 / +2
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+C+LRGNEFFCEVDDDYIQDDFNLCGLS QVPYY+YALDLILD+ESSHGDMFTE
Sbjct: 260 TSWISWFCSLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYEYALDLILDVESSHGDMFTE 439
Query: 597 EQNELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLPVGQSD 776
EQNEL ESAAEMLYGLIH RYILTSKGLAAML+KYKNYDFGRCPRV+C GQPCLPVGQSD
Sbjct: 440 EQNELIESAAEMLYGLIHVRYILTSKGLAAMLDKYKNYDFGRCPRVHCSGQPCLPVGQSD 619
Query: 777 IHRSSTVKIY 806
I RSS VKIY
Sbjct: 620 IPRSSNVKIY 649
Score = 102 bits (217), Expect(2) = 2e-041
Identities = 43/77 (55%), Positives = 55/77 (71%)
Frame = -1 / -1
Query: 806 VYLHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQHCSQSFTGQNVSCMDQPIKHL 627
V H TR+ +V L+NW+AWL V++ KVIVL+ +QHCSQ FT N+S M+Q IKHL
Sbjct: 649 VNFHITRTRNVRLANWKAWLAATVHSWTSAKVIVLVFIQHCSQPFTC*NISNMNQSIKHL 470
Query: 626 CS*FSELILFLSEHITM 576
CS*F++ IL EHITM
Sbjct: 469 CS*FNKFILLFCEHITM 419
Score = 93.2 bits (197), Expect(2) = 2e-026
Identities = 41/76 (53%), Positives = 52/76 (68%)
Frame = +1 / +3
Query: 577 MVICSLRNKMSSENQLQRCFMG*SMHDTF*PVKDWLQCWRSIRTMTLGGARVFTAVVNHA 756
MVICS +++M+ NQLQRCFM * M D F* VK WLQCW + RTMTL + T NHA
Sbjct: 420 MVICSQKSRMNLLNQLQRCFMD*FMFDIF*QVKGWLQCWINTRTMTLADVQECTVAANHA 599
Query: 757 CQLDNQTSIDLVP*RY 804
QL ++T + LV *++
Sbjct: 600 FQLASRTFLVLVM*KF 647
Score = 88.1 bits (186), Expect(2) = 2e-041
Identities = 46/86 (53%), Positives = 50/86 (58%)
Frame = -2 / -2
Query: 592 VNISP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVS 413
VNISP +DS S +RSRA S* GT L PQRLK SQKNS P KLQ HEIH+VS
Sbjct: 435 VNISPCEDSTSNIRSRAYS*YGT*PLSPQRLKSSCM*SSSTSQKNSLPRKLQNHEIHDVS 256
Query: 412 SPSEPLTXXXXXXXXXXXXEQRPLGM 335
SPSEPL + PL M
Sbjct: 255 SPSEPLRSDSSLSVSDSPSDSLPLDM 178
Score = 85.8 bits (181), Expect(2) = 2e-032
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = -2 / -2
Query: 802 IFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSIAASPLLVRMYR 653
IFT+L+R MSD PTGRHG P Q T GH PKS*FLY S+IAA+PLLVR+YR
Sbjct: 645 IFTLLERGMSDWPTGRHGWPLQCTLGHLPKS*FLYLSNIAANPLLVRIYR 496
Score = 77.1 bits (162), Expect(2) = 2e-032
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = -1 / -1
Query: 527 NLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIRLPFGAA 348
NL A T++E+VL V++I+FTEELI P*NPR +FSIR T +* FT+ +R G
Sbjct: 370 NLTA*PTEIEIVLYVIVINFTEELIAPQATEP*NPRCIFSIRTTQV*FFTVSVRFSIGQL 191
Query: 347 ALGDG 333
ALG G
Sbjct: 190 ALGHG 176
Score = 46.4 bits (95), Expect(2) = 2e-026
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = +2 / +1
Query: 341 QGPLLRRGV*F***SIRC*WL*WRRHLVDFMVLQLKRE*VLL*SR**LH 487
QG +R + * * IR W *WRR++VDFMVL L +*VLL*S * LH
Sbjct: 184 QGQAVRWRIGH*Q*RIRPEWF*WRRYIVDFMVL*LAGQ*VLL*S**RLH 330
Score = 32.2 bits (64), Expect(2) = 3e-084
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / +3
Query: 373 LIVKHQMLVALMEKTPRGFHG 435
L VK+Q V LMEK RGFHG
Sbjct: 216 LTVKNQT*VVLMEKIHRGFHG 278
>gb|CB859369.1|CB859369 HI10E02w HI Hordeum vulgare subsp. vulgare cDNA clone HI10E02
3-PRIME, mRNA sequence
Length = 616
Score = 309 bits (670), Expect = 2e-083
Identities = 120/134 (89%), Positives = 128/134 (95%)
Frame = +3 / -1
Query: 579 GDMFTEEQNELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCL 758
GD+FTEEQNEL ES+AEMLYG IHARYILTSKGLAAMLEK+KNYDFGRCPRVYCCGQPCL
Sbjct: 616 GDVFTEEQNELIESSAEMLYGXIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCL 437
Query: 759 PVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYEHLKPQKLS 938
P GQSDI RSSTVK++CPKCED++YPRSKYQGNIDGAYFGTTFPHLFLMTY HLKPQK S
Sbjct: 436 PAGQSDIPRSSTVKVFCPKCEDLHYPRSKYQGNIDGAYFGTTFPHLFLMTYPHLKPQKPS 257
Query: 939 QRYVPRVFGFKLHK 980
Q+YVPRVFGFKLHK
Sbjct: 256 QQYVPRVFGFKLHK 215
Score = 196 bits (423), Expect = 2e-049
Identities = 83/109 (76%), Positives = 87/109 (79%)
Frame = -2 / +3
Query: 973 SLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSMLPWYLDRG**MSSHLGQYIFT 794
SLKPKT GT C+ FCG RC YVI+ R*GNVVPKYAPSMLPWYLD G* SSH GQ FT
Sbjct: 222 SLKPKTLGTYCCDGFCGFRCGYVIKKR*GNVVPKYAPSMLPWYLDLG*CKSSHFGQNTFT 401
Query: 793 VLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSIAASPLLVRMYRAW 647
VLD MSDCP GR G PQQ TRGH PKS*FL FS+IAA PLLV+MYRAW
Sbjct: 402 VLDLGMSDCPAGRQGWPQQYTRGHLPKS*FLNFSNIAARPLLVKMYRAW 548
Score = 155 bits (332), Expect = 7e-037
Identities = 70/134 (52%), Positives = 91/134 (67%)
Frame = -1 / +2
Query: 980 LVELEAKDTRNIALRELLWLEVLVCHQEQMRERCPKVCAVDVALVLGPWVVDVFTLGAVY 801
LV+ EAK+ N+ L LLWL+V +CHQE+MRER KVC+++VALVLGPW+V VFT +
Sbjct: 215 LVKFEAKNPWNVLL*WLLWLQVWICHQEEMRERRTKVCSINVALVLGPWIV*VFTFWTKH 394
Query: 800 LHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQHCSQSFTGQNVSCMDQPIKHLCS 621
LH +V*L W+ L TAV +RA K+I+L L HCS + +V CMD I+HLC
Sbjct: 395 LHCA*PRNV*LPCWKTGLATAVYSRASAKIIILELF*HCS*TLAS*DVPCMDXTIQHLCR 574
Query: 620 *FSELILFLSEHIT 579
* + IL LSE+IT
Sbjct: 575 *LN*FILLLSEYIT 616
Score = 138 bits (297), Expect = 5e-032
Identities = 60/133 (45%), Positives = 82/133 (61%)
Frame = +2 / -3
Query: 587 VH*GTK*ARRISCRDALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPACLLLWSTMPASW 766
+H*G K* + CRDA+W +PCT+H + + CN +V EL* W +P+ +LLW + +S
Sbjct: 608 IH*GAK*IN*VICRDAVWXNPCTVHLN*QGSSCNVRKVQEL*FWQMPSSILLWPALSSSR 429
Query: 767 TIRHPSI*YREDILPQV*RHLLPTVQVPRQHRRRILWDNVPSSVPDDIRAPQATEXXXXX 946
IRH + + E +L ++*R L VQVPRQH ILW +VPSS+ DDI P+ATE
Sbjct: 428 AIRHS*VKHSEGVLSKM*RLTLSKVQVPRQH*WSILWYDVPSSLLDDISTPEATEAITAI 249
Query: 947 XXXXXWLQAPQAM 985
WLQ QA+
Sbjct: 248 RSKGFWLQTSQAI 210
>gb|BQ663500.1|BQ663500 HU02O17u HU Hordeum vulgare subsp. vulgare cDNA clone HU02O17
3-PRIME, mRNA sequence
Length = 596
Score = 296 bits (641), Expect = 2e-079
Identities = 115/127 (90%), Positives = 122/127 (96%)
Frame = +3 / -2
Query: 600 QNELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLPVGQSDI 779
QNEL ES+AEMLYGLIHARYILTSKGLAAMLEK+KNYDFGRCPRVYCCGQPCLP GQSDI
Sbjct: 595 QNELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDI 416
Query: 780 HRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYEHLKPQKLSQRYVPRV 959
RSSTVK++CPKCED++YPRSKYQGNIDGAYFGTTFPHLFLMTY HLKPQK SQ+YVPRV
Sbjct: 415 PRSSTVKVFCPKCEDLHYPRSKYQGNIDGAYFGTTFPHLFLMTYPHLKPQKPSQQYVPRV 236
Query: 960 FGFKLHK 980
FGFKLHK
Sbjct: 235 FGFKLHK 215
Score = 196 bits (423), Expect(2) = 7e-052
Identities = 83/109 (76%), Positives = 87/109 (79%)
Frame = -2 / +3
Query: 973 SLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSMLPWYLDRG**MSSHLGQYIFT 794
SLKPKT GT C+ FCG RC YVI+ R*GNVVPKYAPSMLPWYLD G* SSH GQ FT
Sbjct: 222 SLKPKTLGTYCCDGFCGFRCGYVIKKR*GNVVPKYAPSMLPWYLDLG*CKSSHFGQNTFT 401
Query: 793 VLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSIAASPLLVRMYRAW 647
VLD MSDCP GR G PQQ TRGH PKS*FL FS+IAA PLLV+MYRAW
Sbjct: 402 VLDLGMSDCPAGRQGWPQQYTRGHLPKS*FLNFSNIAARPLLVKMYRAW 548
Score = 142 bits (305), Expect = 4e-033
Identities = 65/127 (51%), Positives = 85/127 (66%)
Frame = -1 / +2
Query: 980 LVELEAKDTRNIALRELLWLEVLVCHQEQMRERCPKVCAVDVALVLGPWVVDVFTLGAVY 801
LV+ EAK+ N+ L LLWL+V +CHQE+MRER KVC+++VALVLGPW+V VFT +
Sbjct: 215 LVKFEAKNPWNVLL*WLLWLQVWICHQEEMRERRTKVCSINVALVLGPWIV*VFTFWTKH 394
Query: 800 LHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQHCSQSFTGQNVSCMDQPIKHLCS 621
LH +V*L W+ L TAV +RA K+I+L L HCS + +V CMD I+HLC
Sbjct: 395 LHCA*PRNV*LPCWKTGLATAVYSRASAKIIILELF*HCS*TLAS*DVPCMD*TIQHLCR 574
Query: 620 *FSELIL 600
* + IL
Sbjct: 575 *LN*FIL 595
Score = 129 bits (277), Expect = 3e-029
Identities = 57/128 (44%), Positives = 78/128 (60%)
Frame = +2 / -1
Query: 602 K*ARRISCRDALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPACLLLWSTMPASWTIRHP 781
K* + CRDA+W +PCT+H + + CN +V EL* W +P+ +LLW + +S IRH
Sbjct: 593 K*IN*VICRDAVWFNPCTVHLN*QGSSCNVRKVQEL*FWQMPSSILLWPALSSSRAIRHS 414
Query: 782 SI*YREDILPQV*RHLLPTVQVPRQHRRRILWDNVPSSVPDDIRAPQATEXXXXXXXXXX 961
+ + E +L ++*R L VQVPRQH ILW +VPSS+ DDI P+ATE
Sbjct: 413 *VKHSEGVLSKM*RLTLSKVQVPRQH*WSILWYDVPSSLLDDISTPEATEAITAIRSKGF 234
Query: 962 WLQAPQAM 985
WLQ QA+
Sbjct: 233 WLQTSQAI 210
Score = 28.6 bits (56), Expect(2) = 7e-052
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3 / +1
Query: 660 CIVHGSAHKASLQLILRAHF 601
C VHG H ASLQ+ HF
Sbjct: 535 CTVHGLNHTASLQMTQLIHF 594
>gb|BG415776.2|BG415776 HVSMEk0007M10f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0007M10f, mRNA sequence
Length = 664
Score = 237 bits (511), Expect(2) = 3e-078
Identities = 98/123 (79%), Positives = 99/123 (80%)
Frame = +3 / +3
Query: 330 SSIPKGRCXXXXXXXXXXXXXXXXXXXXXTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 509
SSIPKGRC TSWISWYCNLRGNEFFCEVDDDYIQDDFNLC
Sbjct: 294 SSIPKGRCSEGESESDSEASDVGGSDGEDTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 473
Query: 510 GLSSQVPYYDYALDLILDIESSHGDMFTEEQNELGESAAEMLYGLIHARYILTSKGLAAM 689
GLSSQVPYYDYALDLILDIESSHGD+FTEE NEL ESAAEMLYGL HARYILTSKGLAAM
Sbjct: 474 GLSSQVPYYDYALDLILDIESSHGDIFTEEXNELVESAAEMLYGLXHARYILTSKGLAAM 653
Query: 690 LEK 698
LEK
Sbjct: 654 LEK 662
Score = 145 bits (311), Expect(2) = 3e-038
Identities = 75/123 (60%), Positives = 79/123 (64%)
Frame = -2 / -1
Query: 697 FSSIAASPLLVRMYRAWXXXXXXXXXXXXXXXXXSVNISP*DDSISKMRSRA*S**GTWL 518
FSSIAA+PLLVRMYRA SV ISP +DSISKMRSRA*S* GT L
Sbjct: 661 FSSIAANPLLVRMYRAXISPYNISAADSTSSXCSSVKISPWEDSISKMRSRA*S*YGT*L 482
Query: 517 LRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVSSPSEPLTXXXXXXXXXXXXEQRPLG 338
L PQRLK SQKNSFPL+LQYHEIHEVSSPSEP T EQRPLG
Sbjct: 481 LSPQRLKSS*M*SSSTSQKNSFPLRLQYHEIHEVSSPSEPPTSDASLSDSDSPSEQRPLG 302
Query: 337 MDD 329
M+D
Sbjct: 301 MED 293
Score = 127 bits (271), Expect(3) = 1e-056
Identities = 54/65 (83%), Positives = 61/65 (93%)
Frame = -1 / -3
Query: 527 NLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIRLPFGAA 348
NL A+ TK+EV+LNV+IIDFTEELIPS*VAIP*NP G+FSIRATNI*CFT+R+ LPFGAA
Sbjct: 491 NLTAKPTKIEVILNVIIIDFTEELIPS*VAIP*NP*GIFSIRATNI*CFTVRL*LPFGAA 312
Query: 347 ALGDG 333
ALGDG
Sbjct: 311 ALGDG 297
Score = 125 bits (268), Expect = 5e-028
Identities = 56/93 (60%), Positives = 58/93 (62%)
Frame = -3 / -2
Query: 696 SPALQPVLYWSECIVHGSAHKASLQLILRAHFVPQ*TYHHEMIQYLK*DREHNHNKELGC 517
SPA QP LYWSECIVH SAH S QLI AH V * YHH +YLK*D+EHNHN EL C
Sbjct: 660 SPA*QPTLYWSECIVHXSAHTTSQQLIPLAHXVLL*KYHHGKTRYLK*DQEHNHNMELDC 481
Query: 516 *GHKG*SRLECXXXXXXXXXXXXXSCNTMKSTR 418
* HK *S LEC CNTMKS R
Sbjct: 480 *AHKD*SHLECNHHRLHRRTHSLLGCNTMKSMR 382
Score = 83.1 bits (175), Expect(3) = 2e-039
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +2 / +2
Query: 341 QGPLLRRGV*F***SIRC*WL*WRRHLVDFMVLQLKRE*VLL*SR**LH 487
QGPLLRRGV *SIRC WL*WRR+L+DFMVLQ KRE*VLL*SR**LH
Sbjct: 305 QGPLLRRGVRVGQ*SIRCWWL*WRRYLMDFMVLQPKRE*VLL*SR**LH 451
Score = 78.0 bits (164), Expect(3) = 2e-039
Identities = 32/48 (66%), Positives = 34/48 (70%)
Frame = +2 / +2
Query: 554 HFRY*IISW*YVH*GTK*ARRISCRDALWADPCTIHSDQ*RTGCNAGE 697
HFRY + W*Y H T *A ISC D +WAD CTIHSDQ*R GC AGE
Sbjct: 518 HFRYRVFPW*YFHRRTX*ASGISC*DVVWADXCTIHSDQ*RVGCYAGE 661
Score = 76.2 bits (160), Expect(2) = 3e-078
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +3
Query: 174 GAGVGAGLDRKRISDALDKHLEKAVASPSTSRGSAGGGGVRD 299
G+ GAGLDRKRIS+ALDKHLEKA ASPSTSRGSAG G R+
Sbjct: 153 GSAGGAGLDRKRISEALDKHLEKAAASPSTSRGSAGARGNRN 278
Score = 68.4 bits (143), Expect(2) = 7e-022
Identities = 29/40 (72%), Positives = 30/40 (75%)
Frame = +1 / +1
Query: 577 MVICSLRNKMSSENQLQRCFMG*SMHDTF*PVKDWLQCWR 696
MVI S +N MS NQL RC MG* MHDTF*PVK WL CWR
Sbjct: 541 MVIFSQKNXMS*WNQLLRCCMG*XMHDTF*PVKGWLLCWR 660
Score = 66.6 bits (139), Expect(3) = 1e-056
Identities = 29/40 (72%), Positives = 31/40 (77%)
Frame = -1 / -3
Query: 695 LQHCSQSFTGQNVSCMDQPIKHLCS*FSELILFLSEHITM 576
LQH SQ FTGQNVSCM QPI+HL S*F LI F E+ITM
Sbjct: 659 LQHSSQPFTGQNVSCMXQPIQHLSS*FH*LIXFFCENITM 540
Score = 66.1 bits (138), Expect(3) = 1e-056
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -2 / -1
Query: 277 ADPLDVDGDATAFSRCLSSASLIRFRSRPAPTPAP 173
A+PLDV+GDA AFSRCLSSASL+RFRS PAP P
Sbjct: 256 AEPLDVEGDAAAFSRCLSSASLMRFRSSPAPPADP 152
Score = 59.3 bits (123), Expect(2) = 7e-022
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = +1 / +1
Query: 358 KGSLILIVKHQMLVALMEKTPRGFHGIAT*EG 453
KGS VKHQMLVALMEK P GFHGIAT*EG
Sbjct: 322 KGSQSRTVKHQMLVALMEKIPHGFHGIAT*EG 417
Score = 40.9 bits (83), Expect(3) = 2e-039
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 200 PETDQRRARQAP*EGGRIAVHIEGVSG 280
PE QR AR AP EGGR+A+H+E + G
Sbjct: 179 PEAHQRSAR*APGEGGRVALHVERLGG 259
Score = 34.1 bits (68), Expect(2) = 3e-038
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -2
Query: 267 SMWTAMRPPSQGACLARR*SVSGP 196
S W A RPPS GA A R* SGP
Sbjct: 246 STWRATRPPSPGAYRALR*CASGP 175
>gb|BQ662921.1|BQ662921 HS04M10u HS Hordeum vulgare subsp. vulgare cDNA clone HS04M10
3-PRIME, mRNA sequence
Length = 588
Score = 291 bits (630), Expect = 6e-078
Identities = 113/125 (90%), Positives = 120/125 (96%)
Frame = +3 / -1
Query: 606 ELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIHR 785
EL ES+AEMLYGLIHARYILTSKGLAAMLEK+KNYDFGRCPRVYCCGQPCLP GQSDI R
Sbjct: 588 ELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDIPR 409
Query: 786 SSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYEHLKPQKLSQRYVPRVFG 965
SSTVK++CPKCED++YPRSKYQGNIDGAYFGTTFPHLFLMTY HLKPQK SQ+YVPRVFG
Sbjct: 408 SSTVKVFCPKCEDLHYPRSKYQGNIDGAYFGTTFPHLFLMTYPHLKPQKPSQQYVPRVFG 229
Query: 966 FKLHK 980
FKLHK
Sbjct: 228 FKLHK 214
Score = 196 bits (423), Expect(2) = 9e-051
Identities = 83/109 (76%), Positives = 87/109 (79%)
Frame = -2 / +2
Query: 973 SLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSMLPWYLDRG**MSSHLGQYIFT 794
SLKPKT GT C+ FCG RC YVI+ R*GNVVPKYAPSMLPWYLD G* SSH GQ FT
Sbjct: 221 SLKPKTLGTYCCDGFCGFRCGYVIKKR*GNVVPKYAPSMLPWYLDLG*CKSSHFGQNTFT 400
Query: 793 VLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSIAASPLLVRMYRAW 647
VLD MSDCP GR G PQQ TRGH PKS*FL FS+IAA PLLV+MYRAW
Sbjct: 401 VLDLGMSDCPAGRQGWPQQYTRGHLPKS*FLNFSNIAARPLLVKMYRAW 547
Score = 140 bits (301), Expect = 1e-032
Identities = 63/123 (51%), Positives = 83/123 (67%)
Frame = -1 / +1
Query: 980 LVELEAKDTRNIALRELLWLEVLVCHQEQMRERCPKVCAVDVALVLGPWVVDVFTLGAVY 801
LV+ EAK+ N+ L LLWL+V +CHQE+MRER KVC+++VALVLGPW+V VFT +
Sbjct: 214 LVKFEAKNPWNVLL*WLLWLQVWICHQEEMRERRTKVCSINVALVLGPWIV*VFTFWTKH 393
Query: 800 LHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQHCSQSFTGQNVSCMDQPIKHLCS 621
LH +V*L W+ L TAV +RA K+I+L L HCS + +V CMD I+HLC
Sbjct: 394 LHCA*PRNV*LPCWKTGLATAVYSRASAKIIILELF*HCS*TLAS*DVPCMD*TIQHLCR 573
Query: 620 *FS 612
* +
Sbjct: 574 *LN 582
Score = 129 bits (276), Expect = 4e-029
Identities = 55/123 (44%), Positives = 76/123 (61%)
Frame = +2 / -3
Query: 617 ISCRDALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPACLLLWSTMPASWTIRHPSI*YR 796
+ CRDA+W +PCT+H + + CN +V EL* W +P+ +LLW + +S IRH + +
Sbjct: 577 VICRDAVWFNPCTVHLN*QGSSCNVRKVQEL*FWQMPSSILLWPALSSSRAIRHS*VKHS 398
Query: 797 EDILPQV*RHLLPTVQVPRQHRRRILWDNVPSSVPDDIRAPQATEXXXXXXXXXXWLQAP 976
E +L ++*R L VQVPRQH ILW +VPSS+ DDI P+ATE WLQ
Sbjct: 397 EGVLSKM*RLTLSKVQVPRQH*WSILWYDVPSSLLDDISTPEATEAITAIRSKGFWLQTS 218
Query: 977 QAM 985
QA+
Sbjct: 217 QAI 209
Score = 24.9 bits (48), Expect(2) = 9e-051
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3 / +3
Query: 660 CIVHGSAHKASLQL 619
C VHG H ASLQ+
Sbjct: 534 CTVHGLNHTASLQM 575
>gb|AV927744.1|AV927744 AV927744 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd3h20 3', mRNA sequence
Length = 607
Score = 203 bits (437), Expect(2) = 1e-076
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +3 / -1
Query: 615 ESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIHRSST 794
ESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLP+GQSDIHRSST
Sbjct: 604 ESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLPIGQSDIHRSST 425
Query: 795 VKIYCPKCEDIYYPRSKYQ 851
VKIYCPKCEDIYYPRSKYQ
Sbjct: 424 VKIYCPKCEDIYYPRSKYQ 368
Score = 145 bits (311), Expect(2) = 7e-052
Identities = 61/69 (88%), Positives = 65/69 (94%)
Frame = -2 / +3
Query: 856 LPWYLDRG**MSSHLGQYIFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSIAAS 677
+ WYL+RG**MSSHLGQYIFTVLDR +SDCP GRHG PQQ*TRGHRPKS*FLYFSSIAA+
Sbjct: 363 ISWYLERG**MSSHLGQYIFTVLDR*ISDCPIGRHGCPQQ*TRGHRPKS*FLYFSSIAAN 542
Query: 676 PLLVRMYRA 650
PLLVRMYRA
Sbjct: 543 PLLVRMYRA 569
Score = 130 bits (279), Expect = 1e-029
Identities = 54/100 (54%), Positives = 70/100 (70%)
Frame = -1 / +2
Query: 914 LVCHQEQMRERCPKVCAVDVALVLGPWVVDVFTLGAVYLHGTRSMDV*LSNWQAWLTTAV 735
++ ++ +C + LV W+VDVF L VYLH TRS+++*LSNW AWL+TA+
Sbjct: 305 VIVRHQKKVRKCCPIVGSVNILVFRTWIVDVFALRTVYLHCTRSVNI*LSNW*AWLSTAI 484
Query: 734 NTRAPPKVIVLILLQHCSQSFTGQNVSCMDQPIKHLCS*F 615
NT KV+VL+ LQH SQ FTGQNVSCM+QPI+HL S*F
Sbjct: 485 NTWTSSKVVVLVFLQHSSQPFTGQNVSCMNQPIQHLSS*F 604
Score = 126 bits (270), Expect(2) = 2e-038
Identities = 52/79 (65%), Positives = 59/79 (74%)
Frame = +2 / -3
Query: 617 ISCRDALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPACLLLWSTMPASWTIRHPSI*YR 796
ISC D +WAD CTIHSDQ*R GC AGE+ EL LW + CLLLW+TMP +WTIR+ I*Y
Sbjct: 602 ISC*DVVWADSCTIHSDQ*RVGCYAGEIQELRLWTMSTCLLLWTTMPTNWTIRYSPI*YS 423
Query: 797 EDILPQV*RHLLPTVQVPR 853
EDIL V RHLL T +PR
Sbjct: 422 EDILS*VRRHLLSTF*IPR 366
Score = 117 bits (250), Expect(2) = 5e-029
Identities = 53/79 (67%), Positives = 55/79 (69%)
Frame = +1 / -2
Query: 616 NQLQRCFMG*SMHDTF*PVKDWLQCWRSIRTMTLGGARVFTAVVNHACQLDNQTSIDLVP 795
NQL RC MG* MHDTF*PVK WL CWR+ RT TL VF AV NHA QLDNQ DLV
Sbjct: 603 NQLLRCCMG*FMHDTF*PVKGWLLCWRNTRTTTLDDVHVFIAVDNHAYQLDNQIFTDLVQ 424
Query: 796 *RYTAPSVKTSTTHGPSTK 852
*RYT S KTST H +TK
Sbjct: 423 *RYTVLSAKTSTIHVLNTK 367
Score = 109 bits (232), Expect(2) = 6e-037
Identities = 54/84 (64%), Positives = 55/84 (65%)
Frame = -3 / +1
Query: 867 RRRCCLGTWTVGSRCLHTWGSISSRY*IDGCLIVQLAGMVDHSSKHAGTAQSHSSYTSPA 688
R R LG V SRCL T SISS Y*I LIVQL GMV HS+KH QS SS SPA
Sbjct: 352 RLRQYLGI*NVDSRCLRT*DSISSLY*IGEYLIVQLVGMVVHSNKHVDIVQSRSSCISPA 531
Query: 687 LQPVLYWSECIVHGSAHKASLQLI 616
QP LYWSECIVH SAH S QLI
Sbjct: 532 *QPTLYWSECIVHESAHTTSQQLI 603
Score = 105 bits (223), Expect(2) = 1e-076
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +3 / -1
Query: 855 NIDGAYFGTTFPHLFLMTYEHLKPQKLSQRYVPRVFGFKLHKP* 986
+IDGAY+GTTFPHLFLMTY+HLKPQK SQRYVPRVFGFKLHKP*
Sbjct: 367 DIDGAYYGTTFPHLFLMTYDHLKPQKTSQRYVPRVFGFKLHKP* 236
Score = 79.9 bits (168), Expect(2) = 7e-052
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = -2 / +3
Query: 985 HGLWSLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSM 857
HGLWSLKP TRGT*RCE F GLR SYVIR R*GNVVP APS+
Sbjct: 237 HGLWSLKPNTRGT*RCEVFWGLR*SYVIRKR*GNVVP**APSI 365
Score = 66.1 bits (138), Expect(2) = 6e-037
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = -1 / +2
Query: 986 SWLVELEAKDTRNIALRELLWLEVLVCHQEQMRERCPKVCAVDV 855
SWLVELEAK TRNIALR LL LEV+V HQ+++R+ CP V +V++
Sbjct: 236 SWLVELEAKYTRNIALRGLLGLEVIVRHQKKVRKCCPIVGSVNI 367
Score = 53.3 bits (110), Expect(2) = 2e-038
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +2 / -3
Query: 863 RRILWDNVPSSVPDDIRAPQATEXXXXXXXXXXWLQAPQAM 985
R +LWDN+ S DD+R+PQA + WLQAPQAM
Sbjct: 359 RSLLWDNISSPFSDDVRSPQAPKDLAALCSSCIWLQAPQAM 237
Score = 31.3 bits (62), Expect(2) = 5e-029
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1 / -2
Query: 943 AMFLVSLASSSTSHEPHV 996
AMFLV LASSSTSH+ V
Sbjct: 279 AMFLVYLASSSTSHDVEV 226
>gb|BQ465233.1|BQ465233 HU03A07r HU Hordeum vulgare subsp. vulgare cDNA clone HU03A07
5-PRIME, mRNA sequence
Length = 552
Score = 273 bits (591), Expect(2) = 5e-076
Identities = 105/115 (91%), Positives = 111/115 (96%)
Frame = +3 / +2
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+C+LRGNEFFCEVDDDYIQDDFNLCGLS QVPYY+YALDLILD+ESSHGDMFTE
Sbjct: 206 TSWISWFCSLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYEYALDLILDVESSHGDMFTE 385
Query: 597 EQNELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLP 761
EQNEL ESAAEMLYGLIH RYILTSKGLAAML+KYKNYDFGRCPRV+C GQPCLP
Sbjct: 386 EQNELIESAAEMLYGLIHVRYILTSKGLAAMLDKYKNYDFGRCPRVHCSGQPCLP 550
Score = 89.5 bits (189), Expect(2) = 1e-037
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = -1 / -3
Query: 761 WQAWLTTAVNTRAPPKVIVLILLQHCSQSFTGQNVSCMDQPIKHLCS*FSELILFLSEHI 582
W+AWL V++ KVIVL+ +QHCSQ FT N+S M+Q IKHLCS*F++ IL EHI
Sbjct: 550 WKAWLAATVHSWTSAKVIVLVFIQHCSQPFTC*NISNMNQSIKHLCS*FNKFILLFCEHI 371
Query: 581 TM 576
TM
Sbjct: 370 TM 365
Score = 88.1 bits (186), Expect(2) = 1e-037
Identities = 46/86 (53%), Positives = 50/86 (58%)
Frame = -2 / -1
Query: 592 VNISP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVS 413
VNISP +DS S +RSRA S* GT L PQRLK SQKNS P KLQ HEIH+VS
Sbjct: 381 VNISPCEDSTSNIRSRAYS*YGT*PLSPQRLKSSCM*SSSTSQKNSLPRKLQNHEIHDVS 202
Query: 412 SPSEPLTXXXXXXXXXXXXEQRPLGM 335
SPSEPL + PL M
Sbjct: 201 SPSEPLRSDSSLSVSDSPSDSLPLDM 124
Score = 84.9 bits (179), Expect(2) = 7e-024
Identities = 36/62 (58%), Positives = 42/62 (67%)
Frame = +1 / +3
Query: 577 MVICSLRNKMSSENQLQRCFMG*SMHDTF*PVKDWLQCWRSIRTMTLGGARVFTAVVNHA 756
MVICS +++M+ NQLQRCFM * M D F* VK WLQCW + RTMTL + T NHA
Sbjct: 366 MVICSQKSRMNLLNQLQRCFMD*FMFDIF*QVKGWLQCWINTRTMTLADVQECTVAANHA 545
Query: 757 CQ 762
Q
Sbjct: 546 FQ 551
Score = 77.1 bits (162), Expect(2) = 3e-026
Identities = 34/65 (52%), Positives = 44/65 (67%)
Frame = -1 / -3
Query: 527 NLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIRLPFGAA 348
NL A T++E+VL V++I+FTEELI P*NPR +FSIR T +* FT+ +R G
Sbjct: 316 NLTA*PTEIEIVLYVIVINFTEELIAPQATEP*NPRCIFSIRTTQV*FFTVSVRFSIGQL 137
Query: 347 ALGDG 333
ALG G
Sbjct: 136 ALGHG 122
Score = 65.2 bits (136), Expect(2) = 3e-026
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = -2 / -1
Query: 763 TGRHG*PQQ*TRGHRPKS*FLYFSSIAASPLLVRMYR 653
TGRHG P Q T GH PKS*FLY S+IAA+PLLVR+YR
Sbjct: 552 TGRHGWPLQCTLGHLPKS*FLYLSNIAANPLLVRIYR 442
Score = 46.4 bits (95), Expect(2) = 7e-024
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = +2 / +1
Query: 341 QGPLLRRGV*F***SIRC*WL*WRRHLVDFMVLQLKRE*VLL*SR**LH 487
QG +R + * * IR W *WRR++VDFMVL L +*VLL*S * LH
Sbjct: 130 QGQAVRWRIGH*Q*RIRPEWF*WRRYIVDFMVL*LAGQ*VLL*S**RLH 276
Score = 32.2 bits (64), Expect(2) = 5e-076
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / +3
Query: 373 LIVKHQMLVALMEKTPRGFHG 435
L VK+Q V LMEK RGFHG
Sbjct: 162 LTVKNQT*VVLMEKIHRGFHG 224
>gb|AW982908.2|AW982908 HVSMEg0004I13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0004I13f, mRNA sequence
Length = 554
Score = 225 bits (486), Expect(2) = 9e-075
Identities = 93/125 (74%), Positives = 97/125 (77%)
Frame = +3 / +2
Query: 330 SSIPKGRCXXXXXXXXXXXXXXXXXXXXXTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 509
SSIPKGRC TSWISWYCNLRGNEFFCEVDDDYIQDDFNLC
Sbjct: 179 SSIPKGRCSEGESESDSEASDVGGSDGEDTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 358
Query: 510 GLSSQVPYYDYALDLILDIESSHGDMFTEEQNELGESAAEMLYGLIHARYILTSKGLAAM 689
GLSSQVPYYDYALDLILDIE+SHGD+FTE QNEL S AE++ GLIHARYILTSK LA M
Sbjct: 359 GLSSQVPYYDYALDLILDIEASHGDIFTERQNELMGSTAEIVDGLIHARYILTSKRLACM 538
Query: 690 LEKYK 704
LEKYK
Sbjct: 539 LEKYK 553
Score = 127 bits (271), Expect(3) = 5e-054
Identities = 54/65 (83%), Positives = 61/65 (93%)
Frame = -1 / -2
Query: 527 NLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIRLPFGAA 348
NL A+ TK+EV+LNV+IIDFTEELIPS*VAIP*NP G+FSIRATNI*CFT+R+ LPFGAA
Sbjct: 376 NLTAKPTKIEVILNVIIIDFTEELIPS*VAIP*NP*GIFSIRATNI*CFTVRL*LPFGAA 197
Query: 347 ALGDG 333
ALGDG
Sbjct: 196 ALGDG 182
Score = 121 bits (259), Expect = 9e-027
Identities = 54/93 (58%), Positives = 57/93 (61%)
Frame = -3 / -1
Query: 696 SPALQPVLYWSECIVHGSAHKASLQLILRAHFVPQ*TYHHEMIQYLK*DREHNHNKELGC 517
SPA +P YWSECIVH SAH QLI AHFV * YHH +YLK*D+EHNHN EL C
Sbjct: 545 SPAYKPTFYWSECIVHESAHPQFQQLIPLAHFVFL*KYHHGKPRYLK*DQEHNHNMELDC 366
Query: 516 *GHKG*SRLECXXXXXXXXXXXXXSCNTMKSTR 418
* HK *S LEC CNTMKS R
Sbjct: 365 *AHKD*SHLECNHHRLHRRTHSLLGCNTMKSMR 267
Score = 114 bits (243), Expect(3) = 1e-033
Identities = 57/88 (64%), Positives = 60/88 (68%)
Frame = -2 / -3
Query: 592 VNISP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVS 413
V ISP + SISKMRSRA*S* GT LL PQRLK SQKNSFPL+LQYHEIHEVS
Sbjct: 441 VKISPWEASISKMRSRA*S*YGT*LLSPQRLKSS*M*SSSTSQKNSFPLRLQYHEIHEVS 262
Query: 412 SPSEPLTXXXXXXXXXXXXEQRPLGMDD 329
SPSEP T EQRPLGM+D
Sbjct: 261 SPSEPPTSDASLSDSDSPSEQRPLGMED 178
Score = 83.1 bits (175), Expect(3) = 1e-036
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +2 / +1
Query: 341 QGPLLRRGV*F***SIRC*WL*WRRHLVDFMVLQLKRE*VLL*SR**LH 487
QGPLLRRGV *SIRC WL*WRR+L+DFMVLQ KRE*VLL*SR**LH
Sbjct: 190 QGPLLRRGVRVGQ*SIRCWWL*WRRYLMDFMVLQPKRE*VLL*SR**LH 336
Score = 76.2 bits (160), Expect(2) = 9e-075
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +2
Query: 174 GAGVGAGLDRKRISDALDKHLEKAVASPSTSRGSAGGGGVRD 299
G+ GAGLDRKRIS+ALDKHLEKA ASPSTSRGSAG G R+
Sbjct: 38 GSAGGAGLDRKRISEALDKHLEKAAASPSTSRGSAGARGNRN 163
Score = 68.0 bits (142), Expect(3) = 1e-036
Identities = 29/49 (59%), Positives = 33/49 (67%)
Frame = +2 / +1
Query: 554 HFRY*IISW*YVH*GTK*ARRISCRDALWADPCTIHSDQ*RTGCNAGEV 700
HFRY W*Y H TK*A I+C + WAD CTIHSDQ*+ G AGE+
Sbjct: 403 HFRYRGFPW*YFHRKTK*ANGINC*NCGWADSCTIHSDQ*KVGLYAGEI 549
Score = 66.1 bits (138), Expect(3) = 5e-054
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -2 / -3
Query: 277 ADPLDVDGDATAFSRCLSSASLIRFRSRPAPTPAP 173
A+PLDV+GDA AFSRCLSSASL+RFRS PAP P
Sbjct: 141 AEPLDVEGDAAAFSRCLSSASLMRFRSSPAPPADP 37
Score = 57.9 bits (120), Expect(3) = 5e-054
Identities = 26/42 (61%), Positives = 30/42 (71%)
Frame = -1 / -2
Query: 701 ILLQHCSQSFTGQNVSCMDQPIKHLCS*FSELILFLSEHITM 576
+ LQH SQ FTGQNVSCM+QPI + S* LIL E+ITM
Sbjct: 550 VFLQHTSQPFTGQNVSCMNQPIHNFSS*SH*LILSFCENITM 425
Score = 40.9 bits (83), Expect(3) = 1e-036
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 200 PETDQRRARQAP*EGGRIAVHIEGVSG 280
PE QR AR AP EGGR+A+H+E + G
Sbjct: 64 PEAHQRSAR*APGEGGRVALHVERLGG 144
Score = 34.1 bits (68), Expect(3) = 1e-033
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -1
Query: 267 SMWTAMRPPSQGACLARR*SVSGP 196
S W A RPPS GA A R* SGP
Sbjct: 131 STWRATRPPSPGAYRALR*CASGP 60
Score = 34.1 bits (68), Expect(3) = 1e-033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2 / -3
Query: 703 LYFSSIAASPLLVRMYRA 650
LYFSSI A+ LLVRMYRA
Sbjct: 552 LYFSSIQANLLLVRMYRA 499
>gb|BE194657.3|BE194657 HVSMEh0086G10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0086G10f, mRNA sequence
Length = 849
Score = 194 bits (418), Expect(4) = 3e-073
Identities = 76/82 (92%), Positives = 79/82 (96%)
Frame = +3 / +2
Query: 573 SHGDMFTEEQNELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQP 752
S GD+FTEEQNEL ESAAEMLYGLIHARYILTSKGLAAMLEKYKNY FGRCPRVYCCGQP
Sbjct: 224 SEGDIFTEEQNELVESAAEMLYGLIHARYILTSKGLAAMLEKYKNYYFGRCPRVYCCGQP 403
Query: 753 CLPVGQSDIHRSSTVKIYCPKC 818
CLP+GQSDIHRS+TVKIYCPKC
Sbjct: 404 CLPIGQSDIHRSNTVKIYCPKC 469
Score = 121 bits (259), Expect(3) = 2e-034
Identities = 50/76 (65%), Positives = 57/76 (75%)
Frame = +2 / +1
Query: 581 *YVH*GTK*ARRISCRDALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPACLLLWSTMPA 760
*Y H TK*A ISC D +WAD CTIHSDQ*R GC AGE+ EL LW + CLLLW+TMP
Sbjct: 232 *YFHRRTK*ASGISC*DVVWADSCTIHSDQ*RVGCYAGEIQELLLWTMSTCLLLWTTMPT 411
Query: 761 SWTIRHPSI*YREDIL 808
+WTIR+ I*Y ED+L
Sbjct: 412 NWTIRYSPI*YSEDLL 459
Score = 117 bits (250), Expect(5) = 4e-043
Identities = 51/79 (64%), Positives = 61/79 (77%)
Frame = -1 / -3
Query: 815 LGAVYLHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQHCSQSFTGQNVSCMDQPI 636
L V LH RS+++*LSNW AWL+TA+NT KV+VL+ LQH SQ FTGQNVSCM+QPI
Sbjct: 466 LRTVNLHCIRSVNI*LSNW*AWLSTAINTWTSSKVVVLVFLQHSSQPFTGQNVSCMNQPI 287
Query: 635 KHLCS*FSELILFLSEHIT 579
+HL S*F LILF E+IT
Sbjct: 286 QHLSS*FH*LILFFCENIT 230
Score = 115 bits (246), Expect(3) = 5e-028
Identities = 54/80 (67%), Positives = 56/80 (70%)
Frame = -2 / -1
Query: 817 HLGQYIFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSIAASPLLVRMYRAWXXX 638
HLGQ IFTVLDR +SDCP GRHG PQQ*TRGHRPK *FLYFSSIAA+PLLVRMYRA
Sbjct: 468 HLGQ*IFTVLDR*ISDCPIGRHGCPQQ*TRGHRPK**FLYFSSIAANPLLVRMYRA*ISP 289
Query: 637 XXXXXXXXXXXXXXSVNISP 578
SV ISP
Sbjct: 288 YNISAADSTSSFCSSVKISP 229
Score = 111 bits (238), Expect = 7e-024
Identities = 51/81 (62%), Positives = 56/81 (69%)
Frame = +1 / +3
Query: 580 VICSLRNKMSSENQLQRCFMG*SMHDTF*PVKDWLQCWRSIRTMTLGGARVFTAVVNHAC 759
VI S +NKMS NQL RC MG* MHDTF*PVK WL CWR+ RT TL VF AV NHA
Sbjct: 231 VIFSQKNKMS*WNQLLRCCMG*FMHDTF*PVKGWLLCWRNTRTTTLDDVHVFIAVDNHAY 410
Query: 760 QLDNQTSIDLVP*RYTAPSVK 822
QLDNQ DL+ *R+T S +
Sbjct: 411 QLDNQIFTDLIQ*RFTVLSAE 473
Score = 102 bits (218), Expect = 4e-021
Identities = 50/76 (65%), Positives = 51/76 (67%)
Frame = -3 / -2
Query: 807 SISSRY*IDGCLIVQLAGMVDHSSKHAGTAQSHSSYTSPALQPVLYWSECIVHGSAHKAS 628
S SS Y*I LIVQL GMV HS+KH QS SS SPA QP LYWSECIVH SAH S
Sbjct: 458 SKSSLY*IGEYLIVQLVGMVVHSNKHVDIVQSSSSCISPA*QPTLYWSECIVHESAHTTS 279
Query: 627 LQLILRAHFVPQ*TYH 580
QLI AHFV * YH
Sbjct: 278 QQLIPLAHFVLL*KYH 231
Score = 76.2 bits (160), Expect(4) = 3e-073
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +2
Query: 174 GAGVGAGLDRKRISDALDKHLEKAVASPSTSRGSAGGGGVRD 299
G+ GAGLDRKRIS+ALDKHLEKA ASPSTSRGSAG G R+
Sbjct: 59 GSAGGAGLDRKRISEALDKHLEKAAASPSTSRGSAGARGNRN 184
Score = 66.1 bits (138), Expect(5) = 4e-043
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -2 / -1
Query: 277 ADPLDVDGDATAFSRCLSSASLIRFRSRPAPTPAP 173
A+PLDV+GDA AFSRCLSSASL+RFRS PAP P
Sbjct: 162 AEPLDVEGDAAAFSRCLSSASLMRFRSSPAPPADP 58
Score = 47.3 bits (97), Expect(4) = 3e-073
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +3 / +3
Query: 855 NIDGAYFGTTFPHLFLMTYEHL 920
+IDGA++GTTFPH+ LMTY HL
Sbjct: 504 DIDGAFYGTTFPHMSLMTYHHL 569
Score = 38.2 bits (77), Expect(3) = 2e-034
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2 / +1
Query: 200 PETDQRRARQAP*EGGRIAVHIEGVSG 280
PE QR AR AP E GR+A+H+E + G
Sbjct: 85 PEAHQRSAR*APGESGRVALHVERLGG 165
Score = 30.9 bits (61), Expect(3) = 2e-034
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2 / +2
Query: 863 RRILWDNVPSSVPDDIRAPQA 925
R +LWDN+ S V DD+ +P +
Sbjct: 512 RCLLWDNISSHVSDDVPSPSS 574
Score = 29.5 bits (58), Expect(3) = 5e-028
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -3 / -2
Query: 267 SMWTAMRPPSQGACLARR*SVSGP 196
S W A RP S GA A R* SGP
Sbjct: 152 STWRATRPLSPGAYRALR*CASGP 81
Score = 29.5 bits (58), Expect(5) = 4e-043
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 910 YVIRNR*GNVVPKYAPSM 857
YVIR+ *GNVVP APS+
Sbjct: 559 YVIRDM*GNVVP*KAPSI 506
Score = 23.5 bits (45), Expect(3) = 5e-028
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = -1 / -2
Query: 983 WLVELEAKDTRNIALRELLWLEVLVCHQEQMRERCPKVCAVDVALVLGPWVVDVF 819
W + LEAK+ + W ++ ++ +C + VLG + DVF
Sbjct: 635 WFLGLEAKNHGKHSSTSFYWG*KVMVRHQRHVRKCCPIEGTVNIWVLGSRIADVF 471
Score = 23.1 bits (44), Expect(4) = 3e-073
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +2
Query: 330 SSIPKGRC 353
SSIPKGRC
Sbjct: 200 SSIPKGRC 223
Score = 22.6 bits (43), Expect(5) = 4e-043
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 365 LPFGAAALGDG 333
+ FGAAA GDG
Sbjct: 235 ITFGAAAFGDG 203
Score = 21.7 bits (41), Expect(5) = 4e-043
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2 / -1
Query: 181 PAPPCLYI 158
PA PCLYI
Sbjct: 69 PADPCLYI 46
>gb|CA002012.1|CA002012 HS06E04r HS Hordeum vulgare subsp. vulgare cDNA clone HS06E04
5-PRIME, mRNA sequence
Length = 628
Score = 218 bits (471), Expect(2) = 1e-072
Identities = 89/112 (79%), Positives = 90/112 (80%)
Frame = +3 / +2
Query: 330 SSIPKGRCXXXXXXXXXXXXXXXXXXXXXTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 509
SSIPKGRC TSWISWYCNLRGNEFFCEVDDDYIQDDFNLC
Sbjct: 293 SSIPKGRCSEGESESDSEASDVGGSDGEDTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 472
Query: 510 GLSSQVPYYDYALDLILDIESSHGDMFTEEQNELGESAAEMLYGLIHARYIL 665
GLSSQVPYYDYALDLILDIESSHGD+FTEEQNEL ESAAEMLYGLIHARYIL
Sbjct: 473 GLSSQVPYYDYALDLILDIESSHGDIFTEEQNELVESAAEMLYGLIHARYIL 628
Score = 127 bits (271), Expect(3) = 5e-052
Identities = 54/65 (83%), Positives = 61/65 (93%)
Frame = -1 / -1
Query: 527 NLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIRLPFGAA 348
NL A+ TK+EV+LNV+IIDFTEELIPS*VAIP*NP G+FSIRATNI*CFT+R+ LPFGAA
Sbjct: 490 NLTAKPTKIEVILNVIIIDFTEELIPS*VAIP*NP*GIFSIRATNI*CFTVRL*LPFGAA 311
Query: 347 ALGDG 333
ALGDG
Sbjct: 310 ALGDG 296
Score = 123 bits (263), Expect(2) = 1e-031
Identities = 64/112 (57%), Positives = 67/112 (59%)
Frame = -2 / -2
Query: 664 RMYRAWXXXXXXXXXXXXXXXXXSVNISP*DDSISKMRSRA*S**GTWLLRPQRLKXXXX 485
RMYRA SV ISP +DSISKMRSRA*S* GT LL PQRLK
Sbjct: 627 RMYRA*ISPYNISAADSTSSFCSSVKISPWEDSISKMRSRA*S*YGT*LLSPQRLKSS*M 448
Query: 484 XXXXXSQKNSFPLKLQYHEIHEVSSPSEPLTXXXXXXXXXXXXEQRPLGMDD 329
SQKNSFPL+LQYHEIHEVSSPSEP T EQRPLGM+D
Sbjct: 447 *SSSTSQKNSFPLRLQYHEIHEVSSPSEPPTSDASLSDSDSPSEQRPLGMED 292
Score = 105 bits (225), Expect = 4e-022
Identities = 48/82 (58%), Positives = 50/82 (60%)
Frame = -3 / -3
Query: 663 ECIVHGSAHKASLQLILRAHFVPQ*TYHHEMIQYLK*DREHNHNKELGC*GHKG*SRLEC 484
ECIVH SAH S QLI AHFV * YHH +YLK*D+EHNHN EL C* HK *S LEC
Sbjct: 626 ECIVHESAHTTSQQLIPLAHFVLL*KYHHGKTRYLK*DQEHNHNMELDC*AHKD*SHLEC 447
Query: 483 XXXXXXXXXXXXXSCNTMKSTR 418
CNTMKS R
Sbjct: 446 NHHRLHRRTHSLLGCNTMKSMR 381
Score = 83.1 bits (175), Expect(3) = 2e-034
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +2 / +1
Query: 341 QGPLLRRGV*F***SIRC*WL*WRRHLVDFMVLQLKRE*VLL*SR**LH 487
QGPLLRRGV *SIRC WL*WRR+L+DFMVLQ KRE*VLL*SR**LH
Sbjct: 304 QGPLLRRGVRVGQ*SIRCWWL*WRRYLMDFMVLQPKRE*VLL*SR**LH 450
Score = 76.2 bits (160), Expect(2) = 1e-072
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +2
Query: 174 GAGVGAGLDRKRISDALDKHLEKAVASPSTSRGSAGGGGVRD 299
G+ GAGLDRKRIS+ALDKHLEKA ASPSTSRGSAG G R+
Sbjct: 152 GSAGGAGLDRKRISEALDKHLEKAAASPSTSRGSAGARGNRN 277
Score = 66.1 bits (138), Expect(3) = 5e-052
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -2 / -2
Query: 277 ADPLDVDGDATAFSRCLSSASLIRFRSRPAPTPAP 173
A+PLDV+GDA AFSRCLSSASL+RFRS PAP P
Sbjct: 255 AEPLDVEGDAAAFSRCLSSASLMRFRSSPAPPADP 151
Score = 60.6 bits (126), Expect(3) = 2e-034
Identities = 24/37 (64%), Positives = 26/37 (70%)
Frame = +2 / +1
Query: 554 HFRY*IISW*YVH*GTK*ARRISCRDALWADPCTIHS 664
HFRY + W*Y H TK*A ISC D +WAD CTIHS
Sbjct: 517 HFRYRVFPW*YFHRRTK*ASGISC*DVVWADSCTIHS 627
Score = 51.0 bits (105), Expect(3) = 5e-052
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -1 / -1
Query: 665 QNVSCMDQPIKHLCS*FSELILFLSEHITM 576
QNVSCM+QPI+HL S*F LILF E+ITM
Sbjct: 628 QNVSCMNQPIQHLSS*FH*LILFFCENITM 539
Score = 40.9 bits (83), Expect(3) = 2e-034
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 200 PETDQRRARQAP*EGGRIAVHIEGVSG 280
PE QR AR AP EGGR+A+H+E + G
Sbjct: 178 PEAHQRSAR*APGEGGRVALHVERLGG 258
Score = 34.1 bits (68), Expect(2) = 1e-031
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -3
Query: 267 SMWTAMRPPSQGACLARR*SVSGP 196
S W A RPPS GA A R* SGP
Sbjct: 245 STWRATRPPSPGAYRALR*CASGP 174
>gb|BF265820.1|BF265820 HV_CEa0013G19f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013G19f, mRNA sequence
Length = 771
Score = 134 bits (288), Expect(4) = 5e-071
Identities = 51/68 (75%), Positives = 59/68 (86%)
Frame = +3 / +3
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW CNLRGN+FFC+ DDY++DDFN+CGLSSQVPYYDYALDLI+DI GD+FTE
Sbjct: 294 TSWISWDCNLRGNDFFCDDGDDYVRDDFNVCGLSSQVPYYDYALDLIVDIAYCTGDIFTE 473
Query: 597 EQNELGES 620
+ NEL ES
Sbjct: 474 KHNELLES 497
Score = 92.3 bits (195), Expect(4) = 1e-045
Identities = 49/88 (55%), Positives = 52/88 (59%)
Frame = -2 / -3
Query: 592 VNISP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVS 413
V ISP +IS MRSRA*S* GT LL PQ LK SQK SFPL+LQ HEIHEVS
Sbjct: 469 VKISPVQYAISTMRSRA*S*YGT*LLSPQTLKSSRT*SSPSSQKKSFPLRLQSHEIHEVS 290
Query: 412 SPSEPLTXXXXXXXXXXXXEQRPLGMDD 329
SPSEP T + RPL M D
Sbjct: 289 SPSEPPTSHASLSDSDSPSKHRPLSM*D 206
Score = 91.8 bits (194), Expect(4) = 4e-035
Identities = 41/62 (66%), Positives = 49/62 (79%)
Frame = -1 / -2
Query: 527 NLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIRLPFGAA 348
NL AE +EV+ NV+I TEE+IPS*VAIP*NP G+FSIRAT+I CFT+R+ LPF A
Sbjct: 404 NLTAEPANIEVISNVIITVVTEEVIPS*VAIP*NP*GIFSIRATDISCFTVRL*LPFEAP 225
Query: 347 AL 342
AL
Sbjct: 224 AL 219
Score = 75.3 bits (158), Expect(4) = 5e-071
Identities = 32/43 (74%), Positives = 33/43 (76%)
Frame = +3 / +1
Query: 621 AAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQ 749
AA+MLYGLIHARYILT GLAAMLEK YD GRC Y CGQ
Sbjct: 499 AADMLYGLIHARYILTM*GLAAMLEKCNIYDXGRCAPAYWCGQ 627
Score = 69.8 bits (146), Expect(4) = 2e-032
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +2 / +2
Query: 341 QGPLLRRGV*F***SIRC*WL*WRRHLVDFMVLQLKRE*VLL*SR**L 484
QGP+LRRGV *S+RC WL*WRR+L+DFM LQ KRE*+LL* R**L
Sbjct: 218 QGPVLRRGVRVGQ*SMRCRWL*WRRYLMDFMGLQPKRE*LLL*RR**L 361
Score = 67.5 bits (141), Expect(4) = 5e-071
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +3 / +3
Query: 174 GAGVGAGLDRKRISDALDKHLEKAVASPSTSRGSAGGGGVRD 299
G+ AGLDRK IS+ALD+HLEKA ASPSTSRGSAG G R+
Sbjct: 66 GSAGWAGLDRKLISEALDQHLEKAAASPSTSRGSAGARGNRN 191
Score = 55.6 bits (115), Expect(4) = 1e-045
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -2 / -3
Query: 277 ADPLDVDGDATAFSRCLSSASLIRFRSRPAPTPAP 173
A+PLDV+GDA AFSRC SSASL+ FRS PA P
Sbjct: 169 AEPLDVEGDAAAFSRC*SSASLMSFRSSPAHPADP 65
Score = 55.1 bits (114), Expect(4) = 2e-032
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +2 / +3
Query: 623 CRDALWADPCTIHSDQ*RTGCNAGEV*EL*LWAVPACLLLWS 748
C +WAD CTIHSD R GC AG++ L LW + LL+W+
Sbjct: 501 C*HVVWADSCTIHSDHVRVGCYAGKMQHLRLWTMCTRLLVWT 626
Score = 51.5 bits (106), Expect(4) = 1e-045
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = -2 / -2
Query: 745 PQQ*TRGHRPKS*FLYFSSIAASPLLVRMYRA 650
P Q* HRP S* L+FSSIAA+P +VRMYRA
Sbjct: 623 PHQ*AGAHRPXS*MLHFSSIAANPYMVRMYRA 528
Score = 48.7 bits (100), Expect(4) = 5e-071
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +3 / +2
Query: 747 QPCLPVGQSDIHRSSTVKIYCPKCEDI 827
+PCLP+GQS++ RSST +IYC KC+ +
Sbjct: 626 KPCLPIGQSNVARSSTGEIYCAKCQKL 706
Score = 46.9 bits (96), Expect(4) = 4e-035
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = -1 / -1
Query: 749 LTTAVNTRAPPKVIVLILLQHCSQSFTGQNVSCMDQPIKHLCS 621
L+T ++ V+ + QH SQ GQNVSCM+QPI+H+ S
Sbjct: 627 LSTPISGCTSSXVVDVAFFQHSSQPLHGQNVSCMNQPIQHVSS 499
Score = 41.4 bits (84), Expect(4) = 1e-045
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = -2 / -1
Query: 817 HLGQYIFTVLDRWMSDCPTGRHG 749
HL QYI VLDR DCP GRHG
Sbjct: 696 HLAQYISPVLDRATFDCPIGRHG 628
Score = 40.9 bits (83), Expect(4) = 2e-032
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 200 PETDQRRARQAP*EGGRIAVHIEGVSG 280
PE QR AR AP EGGR+A+H++ + G
Sbjct: 92 PEAHQRSARSAPGEGGRVALHVKRLGG 172
Score = 35.9 bits (72), Expect(4) = 2e-032
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = +1 / +3
Query: 748 NHACQLDNQTSIDLVP*RYTAPSVK 822
NHA QLDNQ DLV RYTA S K
Sbjct: 627 NHAYQLDNQMLPDLVQGRYTALSAK 701
Score = 35.0 bits (70), Expect(4) = 4e-035
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -1 / -3
Query: 815 LGAVYLHGTRSMDV*LSNWQAW 750
L AVYL TRS ++*LSNW AW
Sbjct: 694 LSAVYLPCTRSGNI*LSNW*AW 629
Score = 30.9 bits (61), Expect(4) = 4e-035
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = -3 / -1
Query: 261 WTAMRPPSQGACLARR*SVSGP 196
W A RPPS GA A R* SGP
Sbjct: 153 WRATRPPSPGADRALR**ASGP 88
>gb|CV054303.1|CV054303 BNEL109a5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL109a5 5' similar to
OJ1058_B11.17, mRNA sequence
Length = 602
Score = 262 bits (567), Expect = 3e-069
Identities = 99/103 (96%), Positives = 102/103 (99%)
Frame = +3 / -2
Query: 678 LAAMLEKYKNYDFGRCPRVYCCGQPCLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGN 857
LAAMLEKYKNYDFGRCPRVYCCGQPCLP+GQSDIHRSSTVKIYCPKCEDIYYPRSKYQGN
Sbjct: 601 LAAMLEKYKNYDFGRCPRVYCCGQPCLPIGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGN 422
Query: 858 IDGAYFGTTFPHLFLMTYEHLKPQKLSQRYVPRVFGFKLHKP* 986
IDGAY+GTTFPHLFLMTY+HLKPQK SQRYVPRVFGFKLHKP*
Sbjct: 421 IDGAYYGTTFPHLFLMTYDHLKPQKTSQRYVPRVFGFKLHKP* 293
Score = 205 bits (443), Expect = 4e-052
Identities = 89/102 (87%), Positives = 92/102 (90%)
Frame = -2 / +3
Query: 985 HGLWSLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSMLPWYLDRG**MSSHLGQ 806
HGLWSLKP TRGT*RCE F GLR SYVIR R*GNVVP APS+LPWYL+RG**MSSHLGQ
Sbjct: 294 HGLWSLKPNTRGT*RCEVFWGLR*SYVIRKR*GNVVP**APSILPWYLERG**MSSHLGQ 473
Query: 805 YIFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS*FLYFSSIAA 680
YIFTVLDR +SDCP GRHG PQQ*TRGHRPKS*FLYFSSIAA
Sbjct: 474 YIFTVLDR*ISDCPIGRHGCPQQ*TRGHRPKS*FLYFSSIAA 599
Score = 154 bits (330), Expect = 1e-036
Identities = 66/103 (64%), Positives = 82/103 (79%)
Frame = -1 / +2
Query: 986 SWLVELEAKDTRNIALRELLWLEVLVCHQEQMRERCPKVCAVDVALVLGPWVVDVFTLGA 807
SWLVELEAK TRNIALR LL LEV+V HQ+++R+ CP V +V++ALV W+VDVF L
Sbjct: 293 SWLVELEAKYTRNIALRGLLGLEVIVRHQKKVRKCCPIVGSVNIALVFRTWIVDVFALRT 472
Query: 806 VYLHGTRSMDV*LSNWQAWLTTAVNTRAPPKVIVLILLQHCSQ 678
VYLH TRS+++*LSNW AWL+TA+NT KV+VL+ LQH SQ
Sbjct: 473 VYLHCTRSVNI*LSNW*AWLSTAINTWTSSKVVVLVFLQHSSQ 601
Score = 138 bits (296), Expect = 7e-032
Identities = 57/102 (55%), Positives = 69/102 (67%)
Frame = +2 / -1
Query: 680 GCNAGEV*EL*LWAVPACLLLWSTMPASWTIRHPSI*YREDILPQV*RHLLPTVQVPRQH 859
GC AGE+ EL LW + CLLLW+TMP +WTIR+ I*Y EDIL V RHLL T +PRQ+
Sbjct: 599 GCYAGEIQELRLWTMSTCLLLWTTMPTNWTIRYSPI*YSEDILS*VRRHLLSTF*IPRQY 420
Query: 860 RRRILWDNVPSSVPDDIRAPQATEXXXXXXXXXXWLQAPQAM 985
R +LWDN+ S DD+R+PQA + WLQAPQAM
Sbjct: 419 *RSLLWDNISSPFSDDVRSPQAPKDLAALCSSCIWLQAPQAM 294
Score = 103 bits (220), Expect = 2e-021
Identities = 54/106 (50%), Positives = 58/106 (54%)
Frame = -3 / +1
Query: 996 YMRFMACGA*SQRHEEHXXXXXXXXXXXXXXXGTDEGTLSQSMRRRCCLGTWTVGSRCLH 817
++ MACGA*SQ HEEH E LS S R+ CLG V SRCL
Sbjct: 283 HLHVMACGA*SQIHEEHSAARSFGA*GDRTSSEKGEEMLSHSRLRQYCLGI*NVDSRCLR 462
Query: 816 TWGSISSRY*IDGCLIVQLAGMVDHSSKHAGTAQSHSSYTSPALQP 679
T SISS Y*I LIVQL GMV HS+KH QS SS SPA QP
Sbjct: 463 T*DSISSLY*IGEYLIVQLVGMVVHSNKHVDIVQSRSSCISPA*QP 600
Score = 90.9 bits (192), Expect(2) = 4e-021
Identities = 42/71 (59%), Positives = 45/71 (63%)
Frame = +1 / -3
Query: 679 WLQCWRSIRTMTLGGARVFTAVVNHACQLDNQTSIDLVP*RYTAPSVKTSTTHGPSTKAT 858
WL CWR+ RT TL VF AV NHA QLDNQ DLV *RYT S KTST H +TKA
Sbjct: 600 WLLCWRNTRTTTLDDVHVFIAVDNHAYQLDNQIFTDLVQ*RYTVLSAKTSTIHVLNTKAI 421
Query: 859 STAHTLGQRSL 891
T T+GQ L
Sbjct: 420 LTEPTMGQHFL 388
Score = 31.3 bits (62), Expect(2) = 4e-021
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1 / -3
Query: 943 AMFLVSLASSSTSHEPHV 996
AMFLV LASSSTSH+ V
Sbjct: 336 AMFLVYLASSSTSHDVEV 283
>gb|BQ465196.1|BQ465196 HU02O17r HU Hordeum vulgare subsp. vulgare cDNA clone HU02O17
5-PRIME, mRNA sequence
Length = 597
Score = 244 bits (528), Expect(2) = 3e-068
Identities = 95/104 (91%), Positives = 103/104 (99%)
Frame = +3 / +2
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+C+LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILDIESS+GD+FTE
Sbjct: 284 TSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNGDVFTE 463
Query: 597 EQNELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCP 728
EQNEL ES+AEMLYGLIHARYILTSKGLAAMLEK+KNYDFGRCP
Sbjct: 464 EQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCP 595
Score = 138 bits (296), Expect(2) = 3e-035
Identities = 69/113 (61%), Positives = 75/113 (66%)
Frame = -2 / -1
Query: 730 RGHRPKS*FLYFSSIAASPLLVRMYRAWXXXXXXXXXXXXXXXXXSVNISP*DDSISKMR 551
RGH PKS*FL FS+IAA PLLV+MYRAW SVN SP +DS+S+MR
Sbjct: 597 RGHLPKS*FLNFSNIAARPLLVKMYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMR 418
Query: 550 SRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVSSPSEPLT 392
S A*S* GT LLRPQRLK SQKNS P KLQ HEI +VSSPSEPLT
Sbjct: 417 SSA*S*YGT*LLRPQRLKSSCI*SSSISQKNSLPRKLQNHEIQDVSSPSEPLT 259
Score = 38.2 bits (77), Expect(2) = 3e-068
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3 / +2
Query: 162 YKQGGAGVGAGLDRKRISDALDKHLEKAVASPS 260
Y+ G G A +DRKRI +AL+KH E+ S S
Sbjct: 44 YRDRGFGGAAEMDRKRIKEALEKHTERPSPSTS 142
Score = 34.1 bits (68), Expect(2) = 3e-035
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -2 / -1
Query: 253 DATAFSRCLSSASLIRFRSRPAPTPAPPCL 164
D S C SSASL+RFRS A P P L
Sbjct: 135 DGDGLSVCFSSASLMRFRSISAAPPKPRSL 46
>gb|BQ470277.1|BQ470277 HX02G12r HX Hordeum vulgare subsp. vulgare cDNA clone HX02G12
5-PRIME, mRNA sequence
Length = 652
Score = 244 bits (528), Expect(2) = 3e-068
Identities = 95/104 (91%), Positives = 103/104 (99%)
Frame = +3 / +2
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+C+LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILDIESS+GD+FTE
Sbjct: 341 TSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNGDVFTE 520
Query: 597 EQNELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCP 728
EQNEL ES+AEMLYGLIHARYILTSKGLAAMLEK+KNYDFGRCP
Sbjct: 521 EQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCP 652
Score = 136 bits (291), Expect(2) = 1e-034
Identities = 68/112 (60%), Positives = 74/112 (66%)
Frame = -2 / -2
Query: 727 GHRPKS*FLYFSSIAASPLLVRMYRAWXXXXXXXXXXXXXXXXXSVNISP*DDSISKMRS 548
GH PKS*FL FS+IAA PLLV+MYRAW SVN SP +DS+S+MRS
Sbjct: 651 GHLPKS*FLNFSNIAARPLLVKMYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMRS 472
Query: 547 RA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVSSPSEPLT 392
A*S* GT LLRPQRLK SQKNS P KLQ HEI +VSSPSEPLT
Sbjct: 471 SA*S*YGT*LLRPQRLKSSCI*SSSISQKNSLPRKLQNHEIQDVSSPSEPLT 316
Score = 38.2 bits (77), Expect(2) = 3e-068
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3 / +2
Query: 162 YKQGGAGVGAGLDRKRISDALDKHLEKAVASPS 260
Y+ G G A +DRKRI +AL+KH E+ S S
Sbjct: 101 YRDRGFGGAAEMDRKRIKEALEKHTERPSPSTS 199
Score = 34.1 bits (68), Expect(2) = 1e-034
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -2 / -2
Query: 253 DATAFSRCLSSASLIRFRSRPAPTPAPPCL 164
D S C SSASL+RFRS A P P L
Sbjct: 192 DGDGLSVCFSSASLMRFRSISAAPPKPRSL 103
>gb|CA021658.1|CA021658 HZ40K23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ40K23
5-PRIME, mRNA sequence
Length = 567
Score = 179 bits (386), Expect(2) = 5e-061
Identities = 71/93 (76%), Positives = 72/93 (77%)
Frame = +3 / +1
Query: 330 SSIPKGRCXXXXXXXXXXXXXXXXXXXXXTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 509
SSIPKGRC TSWISWYCNLRGNEFFCEVDDDYIQDDFNLC
Sbjct: 289 SSIPKGRCSEGESESDSEASDVGGSDGEDTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 468
Query: 510 GLSSQVPYYDYALDLILDIESSHGDMFTEEQNE 608
GLSSQVPYYDYALDLILDIESSHGD+FTEEQNE
Sbjct: 469 GLSSQVPYYDYALDLILDIESSHGDIFTEEQNE 567
Score = 127 bits (271), Expect(2) = 3e-042
Identities = 54/65 (83%), Positives = 61/65 (93%)
Frame = -1 / -1
Query: 527 NLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIRLPFGAA 348
NL A+ TK+EV+LNV+IIDFTEELIPS*VAIP*NP G+FSIRATNI*CFT+R+ LPFGAA
Sbjct: 486 NLTAKPTKIEVILNVIIIDFTEELIPS*VAIP*NP*GIFSIRATNI*CFTVRL*LPFGAA 307
Query: 347 ALGDG 333
ALGDG
Sbjct: 306 ALGDG 292
Score = 117 bits (251), Expect(2) = 5e-030
Identities = 58/88 (65%), Positives = 61/88 (69%)
Frame = -2 / -2
Query: 592 VNISP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVS 413
V ISP +DSISKMRSRA*S* GT LL PQRLK SQKNSFPL+LQYHEIHEVS
Sbjct: 551 VKISPWEDSISKMRSRA*S*YGT*LLSPQRLKSS*M*SSSTSQKNSFPLRLQYHEIHEVS 372
Query: 412 SPSEPLTXXXXXXXXXXXXEQRPLGMDD 329
SPSEP T EQRPLGM+D
Sbjct: 371 SPSEPPTSDASLSDSDSPSEQRPLGMED 288
Score = 83.1 bits (175), Expect(3) = 8e-025
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +2 / +3
Query: 341 QGPLLRRGV*F***SIRC*WL*WRRHLVDFMVLQLKRE*VLL*SR**LH 487
QGPLLRRGV *SIRC WL*WRR+L+DFMVLQ KRE*VLL*SR**LH
Sbjct: 300 QGPLLRRGVRVGQ*SIRCWWL*WRRYLMDFMVLQPKRE*VLL*SR**LH 446
Score = 76.2 bits (160), Expect(2) = 5e-061
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +1
Query: 174 GAGVGAGLDRKRISDALDKHLEKAVASPSTSRGSAGGGGVRD 299
G+ GAGLDRKRIS+ALDKHLEKA ASPSTSRGSAG G R+
Sbjct: 148 GSAGGAGLDRKRISEALDKHLEKAAASPSTSRGSAGARGNRN 273
Score = 66.1 bits (138), Expect(2) = 3e-042
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -2 / -2
Query: 277 ADPLDVDGDATAFSRCLSSASLIRFRSRPAPTPAP 173
A+PLDV+GDA AFSRCLSSASL+RFRS PAP P
Sbjct: 251 AEPLDVEGDAAAFSRCLSSASLMRFRSSPAPPADP 147
Score = 40.9 bits (83), Expect(3) = 8e-025
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 200 PETDQRRARQAP*EGGRIAVHIEGVSG 280
PE QR AR AP EGGR+A+H+E + G
Sbjct: 174 PEAHQRSAR*APGEGGRVALHVERLGG 254
Score = 34.1 bits (68), Expect(2) = 5e-030
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -3
Query: 267 SMWTAMRPPSQGACLARR*SVSGP 196
S W A RPPS GA A R* SGP
Sbjct: 241 STWRATRPPSPGAYRALR*CASGP 170
Score = 28.1 bits (55), Expect(3) = 8e-025
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2 / +3
Query: 554 HFRY*IISW*YVH*GTK* 607
HFRY + W*Y H TK*
Sbjct: 513 HFRYRVFPW*YFHRRTK* 566
>gb|CA007157.1|CA007157 HU06P10r HU Hordeum vulgare subsp. vulgare cDNA clone HU06P10
5-PRIME, mRNA sequence
Length = 561
Score = 212 bits (458), Expect(2) = 1e-058
Identities = 84/92 (91%), Positives = 91/92 (98%)
Frame = +3 / +3
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+C+LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILDIESS+GD+FTE
Sbjct: 285 TSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNGDVFTE 464
Query: 597 EQNELGESAAEMLYGLIHARYILTSKGLAAML 692
EQNEL ES+AEMLYGLIHARYILTSKGLAAML
Sbjct: 465 EQNELIESSAEMLYGLIHARYILTSKGLAAML 560
Score = 114 bits (244), Expect(2) = 3e-028
Identities = 58/100 (58%), Positives = 64/100 (64%)
Frame = -2 / -3
Query: 691 SIAASPLLVRMYRAWXXXXXXXXXXXXXXXXXSVNISP*DDSISKMRSRA*S**GTWLLR 512
+IAA PLLV+MYRAW SVN SP +DS+S+MRS A*S* GT LLR
Sbjct: 559 NIAARPLLVKMYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMRSSA*S*YGT*LLR 380
Query: 511 PQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVSSPSEPLT 392
PQRLK SQKNS P KLQ HEI +VSSPSEPLT
Sbjct: 379 PQRLKSSCI*SSSISQKNSLPRKLQNHEIQDVSSPSEPLT 260
Score = 38.2 bits (77), Expect(2) = 1e-058
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3 / +3
Query: 162 YKQGGAGVGAGLDRKRISDALDKHLEKAVASPS 260
Y+ G G A +DRKRI +AL+KH E+ S S
Sbjct: 45 YRDRGFGGAAEMDRKRIKEALEKHTERPSPSTS 143
Score = 34.1 bits (68), Expect(2) = 3e-028
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -2 / -3
Query: 253 DATAFSRCLSSASLIRFRSRPAPTPAPPCL 164
D S C SSASL+RFRS A P P L
Sbjct: 136 DGDGLSVCFSSASLMRFRSISAAPPKPRSL 47
>gb|CA032718.1|CA032718 HX14A06r HX Hordeum vulgare subsp. vulgare cDNA clone HX14A06
5-PRIME, mRNA sequence
Length = 633
Score = 208 bits (449), Expect(2) = 2e-057
Identities = 82/90 (91%), Positives = 89/90 (98%)
Frame = +3 / +2
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+C+LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILDIESS+GD+FTE
Sbjct: 362 TSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNGDVFTE 541
Query: 597 EQNELGESAAEMLYGLIHARYILTSKGLAA 686
EQNEL ES+AEMLYGLIHARYILTSKGLAA
Sbjct: 542 EQNELIESSAEMLYGLIHARYILTSKGLAA 631
Score = 114 bits (243), Expect(2) = 5e-028
Identities = 58/99 (58%), Positives = 63/99 (63%)
Frame = -2 / -1
Query: 688 IAASPLLVRMYRAWXXXXXXXXXXXXXXXXXSVNISP*DDSISKMRSRA*S**GTWLLRP 509
IAA PLLV+MYRAW SVN SP +DS+S+MRS A*S* GT LLRP
Sbjct: 633 IAARPLLVKMYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMRSSA*S*YGT*LLRP 454
Query: 508 QRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVSSPSEPLT 392
QRLK SQKNS P KLQ HEI +VSSPSEPLT
Sbjct: 453 QRLKSSCI*SSSISQKNSLPRKLQNHEIQDVSSPSEPLT 337
Score = 38.2 bits (77), Expect(2) = 2e-057
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3 / +2
Query: 162 YKQGGAGVGAGLDRKRISDALDKHLEKAVASPS 260
Y+ G G A +DRKRI +AL+KH E+ S S
Sbjct: 122 YRDRGFGGAAEMDRKRIKEALEKHTERPSPSTS 220
Score = 34.1 bits (68), Expect(2) = 5e-028
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -2 / -1
Query: 253 DATAFSRCLSSASLIRFRSRPAPTPAPPCL 164
D S C SSASL+RFRS A P P L
Sbjct: 213 DGDGLSVCFSSASLMRFRSISAAPPKPRSL 124
>gb|BQ467754.1|BQ467754 HS04M10r HS Hordeum vulgare subsp. vulgare cDNA clone HS04M10
5-PRIME, mRNA sequence
Length = 659
Score = 204 bits (441), Expect(2) = 3e-056
Identities = 80/88 (90%), Positives = 87/88 (98%)
Frame = +3 / +2
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+C+LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILDIESS+GD+FTE
Sbjct: 395 TSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNGDVFTE 574
Query: 597 EQNELGESAAEMLYGLIHARYILTSKGL 680
EQNEL ES+AEMLYGLIHARYILTSKGL
Sbjct: 575 EQNELIESSAEMLYGLIHARYILTSKGL 658
Score = 109 bits (232), Expect(2) = 2e-026
Identities = 55/95 (57%), Positives = 60/95 (63%)
Frame = -2 / -3
Query: 676 PLLVRMYRAWXXXXXXXXXXXXXXXXXSVNISP*DDSISKMRSRA*S**GTWLLRPQRLK 497
PLLV+MYRAW SVN SP +DS+S+MRS A*S* GT LLRPQRLK
Sbjct: 654 PLLVKMYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMRSSA*S*YGT*LLRPQRLK 475
Query: 496 XXXXXXXXXSQKNSFPLKLQYHEIHEVSSPSEPLT 392
SQKNS P KLQ HEI +VSSPSEPLT
Sbjct: 474 SSCI*SSSISQKNSLPRKLQNHEIQDVSSPSEPLT 370
Score = 38.2 bits (77), Expect(2) = 3e-056
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3 / +2
Query: 162 YKQGGAGVGAGLDRKRISDALDKHLEKAVASPS 260
Y+ G G A +DRKRI +AL+KH E+ S S
Sbjct: 155 YRDRGFGGAAEMDRKRIKEALEKHTERPSPSTS 253
Score = 34.1 bits (68), Expect(2) = 2e-026
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -2 / -3
Query: 253 DATAFSRCLSSASLIRFRSRPAPTPAPPCL 164
D S C SSASL+RFRS A P P L
Sbjct: 246 DGDGLSVCFSSASLMRFRSISAAPPKPRSL 157
>gb|CA009861.1|CA009861 HT12G23u HT Hordeum vulgare subsp. vulgare cDNA clone HT12G23
3-PRIME, mRNA sequence
Length = 543
Score = 210 bits (453), Expect = 1e-053
Identities = 80/90 (88%), Positives = 84/90 (93%)
Frame = +3 / -1
Query: 717 GRCPRVYCCGQPCLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHL 896
GRCPRV+C GQPCLPVGQSDI RSS VKIYCPKCED+YYPRSKYQ NIDGAYFGTTFPHL
Sbjct: 543 GRCPRVHCSGQPCLPVGQSDIPRSSNVKIYCPKCEDLYYPRSKYQSNIDGAYFGTTFPHL 364
Query: 897 FLMTYEHLKPQKLSQRYVPRVFGFKLHKP* 986
FLMTY HLKPQK SQ+YVP+VFGFKLHKP*
Sbjct: 363 FLMTYPHLKPQKPSQQYVPKVFGFKLHKP* 274
Score = 133 bits (285), Expect = 2e-030
Identities = 61/88 (69%), Positives = 67/88 (76%)
Frame = -2 / +2
Query: 985 HGLWSLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSMLPWYLDRG**MSSHLGQ 806
+GL SLKPKT GT C+ F G +C VIRN+*GNVVPKYAPSML YLD G** SSH GQ
Sbjct: 275 YGL*SLKPKTLGTYCCDGFWGFKCG*VIRNK*GNVVPKYAPSMLL*YLDLG**RSSHFGQ 454
Query: 805 YIFTVLDRWMSDCPTGRHG*PQQ*TRGH 722
IFT+L+R MSD PTGRHG P Q T GH
Sbjct: 455 *IFTLLERGMSDWPTGRHGWPLQCTLGH 538
>gb|BU989668.1|BU989668 HF22F24r HF Hordeum vulgare subsp. vulgare cDNA clone HF22F24
5-PRIME, mRNA sequence
Length = 486
Score = 203 bits (437), Expect(2) = 2e-053
Identities = 79/87 (90%), Positives = 86/87 (98%)
Frame = +3 / +3
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+C+LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILDIESS+GD+FTE
Sbjct: 225 TSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNGDVFTE 404
Query: 597 EQNELGESAAEMLYGLIHARYILTSKG 677
EQNEL ES+AEMLYGLIHARYILTSKG
Sbjct: 405 EQNELIESSAEMLYGLIHARYILTSKG 485
Score = 109 bits (232), Expect(2) = 5e-025
Identities = 55/95 (57%), Positives = 60/95 (63%)
Frame = -2 / -3
Query: 676 PLLVRMYRAWXXXXXXXXXXXXXXXXXSVNISP*DDSISKMRSRA*S**GTWLLRPQRLK 497
PLLV+MYRAW SVN SP +DS+S+MRS A*S* GT LLRPQRLK
Sbjct: 484 PLLVKMYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMRSSA*S*YGT*LLRPQRLK 305
Query: 496 XXXXXXXXXSQKNSFPLKLQYHEIHEVSSPSEPLT 392
SQKNS P KLQ HEI +VSSPSEPLT
Sbjct: 304 SSCI*SSSISQKNSLPRKLQNHEIQDVSSPSEPLT 200
Score = 29.9 bits (59), Expect(2) = 2e-053
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3 / +3
Query: 198 DRKRISDALDKHLEKAVASPS 260
DRKRI +AL+KH E+ S S
Sbjct: 21 DRKRIKEALEKHTERPSPSTS 83
Score = 28.6 bits (56), Expect(2) = 5e-025
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 253 DATAFSRCLSSASLIRFRS 197
D S C SSASL+RFRS
Sbjct: 76 DGDGLSVCFSSASLMRFRS 20
>gb|BU998184.1|BU998184 HI10E02r HI Hordeum vulgare subsp. vulgare cDNA clone HI10E02
5-PRIME, mRNA sequence
Length = 587
Score = 192 bits (413), Expect(2) = 2e-052
Identities = 74/82 (90%), Positives = 81/82 (98%)
Frame = +3 / +2
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+C+LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILDIESS+GD+FTE
Sbjct: 341 TSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNGDVFTE 520
Query: 597 EQNELGESAAEMLYGLIHARYI 662
EQNEL ES+AEMLYGLIHARYI
Sbjct: 521 EQNELIESSAEMLYGLIHARYI 586
Score = 99.6 bits (211), Expect(2) = 1e-023
Identities = 51/90 (56%), Positives = 55/90 (61%)
Frame = -2 / -3
Query: 661 MYRAWXXXXXXXXXXXXXXXXXSVNISP*DDSISKMRSRA*S**GTWLLRPQRLKXXXXX 482
MYRAW SVN SP +DS+S+MRS A*S* GT LLRPQRLK
Sbjct: 585 MYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMRSSA*S*YGT*LLRPQRLKSSCI* 406
Query: 481 XXXXSQKNSFPLKLQYHEIHEVSSPSEPLT 392
SQKNS P KLQ HEI +VSSPSEPLT
Sbjct: 405 SSSISQKNSLPRKLQNHEIQDVSSPSEPLT 316
Score = 38.2 bits (77), Expect(2) = 2e-052
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3 / +2
Query: 162 YKQGGAGVGAGLDRKRISDALDKHLEKAVASPS 260
Y+ G G A +DRKRI +AL+KH E+ S S
Sbjct: 101 YRDRGFGGAAEMDRKRIKEALEKHTERPSPSTS 199
Score = 34.1 bits (68), Expect(2) = 1e-023
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -2 / -3
Query: 253 DATAFSRCLSSASLIRFRSRPAPTPAPPCL 164
D S C SSASL+RFRS A P P L
Sbjct: 192 DGDGLSVCFSSASLMRFRSISAAPPKPRSL 103
>gb|BM377223.2|BM377223 EBem05_SQ004_H19_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ004_H19 5', mRNA sequence
Length = 538
Score = 130 bits (278), Expect(2) = 4e-052
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = +3 / -2
Query: 708 YDFGRCPRVYCCGQPCLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQ 851
YDFGRCPRVYCCGQPCLP+GQSDIHRSSTVKIYCPKCEDIYYPR KYQ
Sbjct: 537 YDFGRCPRVYCCGQPCLPIGQSDIHRSSTVKIYCPKCEDIYYPRFKYQ 394
Score = 103 bits (219), Expect(2) = 1e-036
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = -2 / +2
Query: 856 LPWYLDRG**MSSHLGQYIFTVLDRWMSDCPTGRHG*PQQ*TRGHRPKS* 707
+ WYL RG**MSSHLGQYIFTVLDR +SDCP GRHG PQQ*TRGHRPKS*
Sbjct: 389 ISWYLKRG**MSSHLGQYIFTVLDR*ISDCPIGRHGCPQQ*TRGHRPKS* 538
Score = 95.9 bits (203), Expect(2) = 4e-052
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = +3 / -2
Query: 855 NIDGAYFGTTFPHLFLMTYEHLKPQKLSQRYVPRVFGFKLHKP* 986
+IDGAY+GTTFPHLFLMTY+ LKPQK SQRYVPRVFGFKL KP*
Sbjct: 393 DIDGAYYGTTFPHLFLMTYDPLKPQKTSQRYVPRVFGFKLPKP* 262
Score = 72.1 bits (151), Expect(2) = 1e-021
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = +2 / -1
Query: 713 LWAVPACLLLWSTMPASWTIRHPSI*YREDILPQV*RHLLPTVQVPR 853
LW + CLLLW+TMP +WTIR+ I*Y EDIL V RHLL T +PR
Sbjct: 532 LWTMSTCLLLWTTMPTNWTIRYSPI*YSEDILS*VRRHLLSTF*IPR 392
Score = 70.7 bits (148), Expect(2) = 1e-036
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = -2 / +2
Query: 985 HGLWSLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSM 857
HGL SLKP TRGT RCE F GLR SYVI+ R*GNVVP APS+
Sbjct: 263 HGLGSLKPNTRGTYRCEVFWGLRGSYVIKKR*GNVVP**APSI 391
Score = 51.9 bits (107), Expect(2) = 1e-021
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +2 / -1
Query: 863 RRILWDNVPSSVPDDIRAPQATEXXXXXXXXXXWLQAPQAM 985
R +LWDN+ S DD+R+PQA + WLQAPQAM
Sbjct: 385 RSLLWDNISSPFFDDVRSPQAPKDLAAVCSSCIWLQAPQAM 263
>gb|BQ466667.1|BQ466667 HS01D11T HS Hordeum vulgare subsp. vulgare cDNA clone HS01D11
5-PRIME, mRNA sequence
Length = 574
Score = 198 bits (426), Expect = 8e-050
Identities = 76/86 (88%), Positives = 80/86 (93%)
Frame = +3 / +1
Query: 729 RVYCCGQPCLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMT 908
RV+C GQPCLPVGQSDI RSS VKIYCPKCED+YYPRSKYQ NIDGAYFGTTFPHLFLMT
Sbjct: 13 RVHCSGQPCLPVGQSDIPRSSNVKIYCPKCEDLYYPRSKYQSNIDGAYFGTTFPHLFLMT 192
Query: 909 YEHLKPQKLSQRYVPRVFGFKLHKP* 986
Y HLKPQK SQ+YVP+VFGFKLHKP*
Sbjct: 193 YPHLKPQKPSQQYVPKVFGFKLHKP* 270
Score = 127 bits (273), Expect = 1e-028
Identities = 59/85 (69%), Positives = 65/85 (76%)
Frame = -2 / -3
Query: 985 HGLWSLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSMLPWYLDRG**MSSHLGQ 806
+GL SLKPKT GT C+ F G +C VIRN+*GNVVPKYAPSML YLD G** SSH GQ
Sbjct: 269 YGL*SLKPKTLGTYCCDGFWGFKCG*VIRNK*GNVVPKYAPSMLL*YLDLG**RSSHFGQ 90
Query: 805 YIFTVLDRWMSDCPTGRHG*PQQ*T 731
IFT+L+R MSD PTGRHG P Q T
Sbjct: 89 *IFTLLERGMSDWPTGRHGWPLQCT 15
>gb|BQ466990.1|BQ466990 HS02D11r HS Hordeum vulgare subsp. vulgare cDNA clone HS02D11
5-PRIME, mRNA sequence
Length = 538
Score = 198 bits (426), Expect = 8e-050
Identities = 76/86 (88%), Positives = 80/86 (93%)
Frame = +3 / +1
Query: 729 RVYCCGQPCLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMT 908
RV+C GQPCLPVGQSDI RSS VKIYCPKCED+YYPRSKYQ NIDGAYFGTTFPHLFLMT
Sbjct: 13 RVHCSGQPCLPVGQSDIPRSSNVKIYCPKCEDLYYPRSKYQSNIDGAYFGTTFPHLFLMT 192
Query: 909 YEHLKPQKLSQRYVPRVFGFKLHKP* 986
Y HLKPQK SQ+YVP+VFGFKLHKP*
Sbjct: 193 YPHLKPQKPSQQYVPKVFGFKLHKP* 270
Score = 127 bits (273), Expect = 1e-028
Identities = 59/85 (69%), Positives = 65/85 (76%)
Frame = -2 / -3
Query: 985 HGLWSLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSMLPWYLDRG**MSSHLGQ 806
+GL SLKPKT GT C+ F G +C VIRN+*GNVVPKYAPSML YLD G** SSH GQ
Sbjct: 269 YGL*SLKPKTLGTYCCDGFWGFKCG*VIRNK*GNVVPKYAPSMLL*YLDLG**RSSHFGQ 90
Query: 805 YIFTVLDRWMSDCPTGRHG*PQQ*T 731
IFT+L+R MSD PTGRHG P Q T
Sbjct: 89 *IFTLLERGMSDWPTGRHGWPLQCT 15
>gb|BQ662231.1|BQ662231 HS01D11w HS Hordeum vulgare subsp. vulgare cDNA clone HS01D11
3-PRIME, mRNA sequence
Length = 650
Score = 198 bits (426), Expect = 8e-050
Identities = 76/86 (88%), Positives = 80/86 (93%)
Frame = +3 / -2
Query: 729 RVYCCGQPCLPVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMT 908
RV+C GQPCLPVGQSDI RSS VKIYCPKCED+YYPRSKYQ NIDGAYFGTTFPHLFLMT
Sbjct: 649 RVHCSGQPCLPVGQSDIPRSSNVKIYCPKCEDLYYPRSKYQSNIDGAYFGTTFPHLFLMT 470
Query: 909 YEHLKPQKLSQRYVPRVFGFKLHKP* 986
Y HLKPQK SQ+YVP+VFGFKLHKP*
Sbjct: 469 YPHLKPQKPSQQYVPKVFGFKLHKP* 392
Score = 127 bits (273), Expect = 1e-028
Identities = 59/85 (69%), Positives = 65/85 (76%)
Frame = -2 / +3
Query: 985 HGLWSLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSMLPWYLDRG**MSSHLGQ 806
+GL SLKPKT GT C+ F G +C VIRN+*GNVVPKYAPSML YLD G** SSH GQ
Sbjct: 393 YGL*SLKPKTLGTYCCDGFWGFKCG*VIRNK*GNVVPKYAPSMLL*YLDLG**RSSHFGQ 572
Query: 805 YIFTVLDRWMSDCPTGRHG*PQQ*T 731
IFT+L+R MSD PTGRHG P Q T
Sbjct: 573 *IFTLLERGMSDWPTGRHGWPLQCT 647
>gb|BQ464988.1|BQ464988 HU02F10r HU Hordeum vulgare subsp. vulgare cDNA clone HU02F10
5-PRIME, mRNA sequence
Length = 428
Score = 191 bits (411), Expect = 9e-048
Identities = 75/100 (75%), Positives = 88/100 (88%)
Frame = +3 / +1
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
T WI+W+C +RGNEFF EVDDDYIQDDFNLCGLS+QVPYYD+ALDLILD+E D+F +
Sbjct: 127 TFWINWFCAMRGNEFFAEVDDDYIQDDFNLCGLSAQVPYYDHALDLILDLEPVQEDVFAD 306
Query: 597 EQNELGESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDF 716
+QNEL ++AEMLYGLIHAR ILT+KGLAAMLEK+KN DF
Sbjct: 307 DQNELVVASAEMLYGLIHARNILTTKGLAAMLEKFKNCDF 426
>gb|BG414493.2|BG414493 HVSMEk0002K22f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002K22f, mRNA sequence
Length = 903
Score = 108 bits (230), Expect(3) = 6e-040
Identities = 47/64 (73%), Positives = 55/64 (85%)
Frame = -1 / -3
Query: 524 LAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIRLPFGAAA 345
L + K+EV+LNV+II+FTEELIPS* AIP*NP G+FSIRATNI*CFT+ + LP GAAA
Sbjct: 481 LPGKPPKIEVILNVIIIEFTEELIPS*GAIP*NP*GIFSIRATNI*CFTVGL*LPLGAAA 302
Query: 344 LGDG 333
LGDG
Sbjct: 301 LGDG 290
Score = 91.3 bits (193), Expect(5) = 8e-045
Identities = 37/65 (56%), Positives = 38/65 (58%)
Frame = +3 / +2
Query: 330 SSIPKGRCXXXXXXXXXXXXXXXXXXXXXTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 509
SSIPKGRC TSWISW C LRGNEFFCE DDYIQDDFNL
Sbjct: 287 SSIPKGRCSQGESESDSEASDVGGSDGENTSWISWNCTLRGNEFFCEFYDDYIQDDFNLW 466
Query: 510 GLSSQ 524
GL+ Q
Sbjct: 467 GLTRQ 481
Score = 74.4 bits (156), Expect(3) = 2e-021
Identities = 35/64 (54%), Positives = 40/64 (62%)
Frame = -2 / -1
Query: 520 LLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVSSPSEPLTXXXXXXXXXXXXEQRPL 341
L+ PQRLK SQKNSFPL++Q+HEIHEV SPSEP T EQRPL
Sbjct: 477 LVSPQRLKSS*M*SS*NSQKNSFPLRVQFHEIHEVFSPSEPPTSDASLSDSDSPWEQRPL 298
Query: 340 GMDD 329
GM+D
Sbjct: 297 GMED 286
Score = 72.5 bits (152), Expect(5) = 8e-045
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +3 / +2
Query: 174 GAGVGAGLDRKRISDALDKHLEKAVASPSTSRGSAGGGGVRD 299
G+ GAGLDRKRI++ LDKHLEKA ASPSTSRGSAG G R+
Sbjct: 146 GSAGGAGLDRKRITEPLDKHLEKAAASPSTSRGSAGARGNRN 271
Score = 62.9 bits (131), Expect(3) = 6e-040
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = -2 / -1
Query: 277 ADPLDVDGDATAFSRCLSSASLIRFRSRPAPTPAP 173
A+PLDV+GDA AFSRCLSS S++RFRS PAP P
Sbjct: 249 AEPLDVEGDAAAFSRCLSSGSVMRFRSSPAPPADP 145
Score = 34.5 bits (69), Expect(5) = 8e-045
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2 / +1
Query: 629 DALWADPCTIHSDQ*RTG 682
+ +WADPC IHS Q*R G
Sbjct: 592 NVVWADPCPIHSAQ*RVG 645
Score = 33.6 bits (67), Expect(3) = 2e-021
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -2
Query: 267 SMWTAMRPPSQGACLARR*SVSGP 196
S W A RPPS GA A R* SGP
Sbjct: 239 STWRATRPPSPGAYRAVR*CASGP 168
Score = 32.2 bits (64), Expect(3) = 2e-021
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3 / -2
Query: 681 PVLYWSECIVHGSAH 637
P LYW+E I HGSAH
Sbjct: 644 PTLYWAEWIGHGSAH 600
Score = 32.2 bits (64), Expect(3) = 6e-040
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -1 / -3
Query: 719 PKVIVLILLQHCSQSFTGQNVSCMDQPIKH 630
PK L + +Q FTGQN MDQPI H
Sbjct: 682 PKSEFLDFSRKAAQPFTGQNGLGMDQPIPH 593
Score = 28.6 bits (56), Expect(5) = 8e-045
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / +3
Query: 672 KGLAAMLEKYKNYDFG 719
KG AA LEK KN DFG
Sbjct: 636 KGWAAFLEKSKNSDFG 683
Score = 28.1 bits (55), Expect(5) = 8e-045
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3 / +3
Query: 567 ESSHGDMFTEEQNELGE 617
ESSH D+FT+EQ EL E
Sbjct: 528 ESSHVDIFTQEQIELLE 578
>gb|BF629961.2|BF629961 HVSMEb0007H14f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007H14f, mRNA sequence
Length = 500
Score = 127 bits (271), Expect(2) = 3e-042
Identities = 54/65 (83%), Positives = 61/65 (93%)
Frame = -1 / -1
Query: 527 NLAAEATKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIRLPFGAA 348
NL A+ TK+EV+LNV+IIDFTEELIPS*VAIP*NP G+FSIRATNI*CFT+R+ LPFGAA
Sbjct: 491 NLTAKPTKIEVILNVIIIDFTEELIPS*VAIP*NP*GIFSIRATNI*CFTVRL*LPFGAA 312
Query: 347 ALGDG 333
ALGDG
Sbjct: 311 ALGDG 297
Score = 124 bits (266), Expect(2) = 1e-044
Identities = 48/69 (69%), Positives = 48/69 (69%)
Frame = +3 / +3
Query: 330 SSIPKGRCXXXXXXXXXXXXXXXXXXXXXTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 509
SSIPKGRC TSWISWYCNLRGNEFFCEVDDDYIQDDFNLC
Sbjct: 294 SSIPKGRCSEGESESDSEASDVGGSDGEDTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 473
Query: 510 GLSSQVPYY 536
GLSSQVPYY
Sbjct: 474 GLSSQVPYY 500
Score = 88.1 bits (186), Expect(3) = 3e-021
Identities = 41/67 (61%), Positives = 43/67 (64%)
Frame = -2 / -2
Query: 529 GTWLLRPQRLKXXXXXXXXXSQKNSFPLKLQYHEIHEVSSPSEPLTXXXXXXXXXXXXEQ 350
GT LL PQRLK SQKNSFPL+LQYHEIHEVSSPSEP T EQ
Sbjct: 493 GT*LLSPQRLKSS*M*SSSTSQKNSFPLRLQYHEIHEVSSPSEPPTSDASLSDSDSPSEQ 314
Query: 349 RPLGMDD 329
RPLGM+D
Sbjct: 313 RPLGMED 293
Score = 83.1 bits (175), Expect(2) = 1e-021
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +2 / +2
Query: 341 QGPLLRRGV*F***SIRC*WL*WRRHLVDFMVLQLKRE*VLL*SR**LH 487
QGPLLRRGV *SIRC WL*WRR+L+DFMVLQ KRE*VLL*SR**LH
Sbjct: 305 QGPLLRRGVRVGQ*SIRCWWL*WRRYLMDFMVLQPKRE*VLL*SR**LH 451
Score = 76.2 bits (160), Expect(2) = 1e-044
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +3
Query: 174 GAGVGAGLDRKRISDALDKHLEKAVASPSTSRGSAGGGGVRD 299
G+ GAGLDRKRIS+ALDKHLEKA ASPSTSRGSAG G R+
Sbjct: 153 GSAGGAGLDRKRISEALDKHLEKAAASPSTSRGSAGARGNRN 278
Score = 66.1 bits (138), Expect(2) = 3e-042
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -2 / -2
Query: 277 ADPLDVDGDATAFSRCLSSASLIRFRSRPAPTPAP 173
A+PLDV+GDA AFSRCLSSASL+RFRS PAP P
Sbjct: 256 AEPLDVEGDAAAFSRCLSSASLMRFRSSPAPPADP 152
Score = 40.9 bits (83), Expect(2) = 1e-021
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 200 PETDQRRARQAP*EGGRIAVHIEGVSG 280
PE QR AR AP EGGR+A+H+E + G
Sbjct: 179 PEAHQRSAR*APGEGGRVALHVERLGG 259
Score = 34.1 bits (68), Expect(3) = 3e-021
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -3 / -3
Query: 267 SMWTAMRPPSQGACLARR*SVSGP 196
S W A RPPS GA A R* SGP
Sbjct: 246 STWRATRPPSPGAYRALR*CASGP 175
Score = 21.7 bits (41), Expect(3) = 3e-021
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2 / -2
Query: 181 PAPPCLYI 158
PA PCLYI
Sbjct: 163 PADPCLYI 140
>gb|BQ662841.1|BQ662841 HS04G18u HS Hordeum vulgare subsp. vulgare cDNA clone HS04G18
3-PRIME, mRNA sequence
Length = 435
Score = 171 bits (368), Expect = 8e-042
Identities = 65/74 (87%), Positives = 70/74 (94%)
Frame = +3 / -1
Query: 759 PVGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYEHLKPQKLS 938
P GQSDI RSSTVK++CPKCED++YPRSKYQGNIDGAYFGTTFPHLFLMTY HLKPQK S
Sbjct: 435 PAGQSDIPRSSTVKVFCPKCEDLHYPRSKYQGNIDGAYFGTTFPHLFLMTYPHLKPQKPS 256
Query: 939 QRYVPRVFGFKLHK 980
Q+YVPRVFGFKLHK
Sbjct: 255 QQYVPRVFGFKLHK 214
Score = 128 bits (275), Expect = 5e-029
Identities = 53/70 (75%), Positives = 55/70 (78%)
Frame = -2 / +2
Query: 973 SLKPKTRGT*RCESFCGLRCSYVIRNR*GNVVPKYAPSMLPWYLDRG**MSSHLGQYIFT 794
SLKPKT GT C+ FCG RC YVI+ R*GNVVPKYAPSMLPWYLD G* SSH GQ FT
Sbjct: 221 SLKPKTLGTYCCDGFCGFRCGYVIKKR*GNVVPKYAPSMLPWYLDLG*CKSSHFGQNTFT 400
Query: 793 VLDRWMSDCP 764
VLD MSDCP
Sbjct: 401 VLDLGMSDCP 430
>gb|AV923038.1|AV923038 AV923038 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd3h20 5', mRNA sequence
Length = 492
Score = 120 bits (257), Expect(2) = 2e-040
Identities = 51/59 (86%), Positives = 57/59 (96%)
Frame = -1 / -1
Query: 509 TKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIRLPFGAAALGDG 333
TK+EV+LNV+IIDFTEELIPS*VAIP*NP G+FSIRATNI*CFT+R+ LPFGAAALGDG
Sbjct: 486 TKIEVILNVIIIDFTEELIPS*VAIP*NP*GIFSIRATNI*CFTVRL*LPFGAAALGDG 310
Score = 107 bits (228), Expect(2) = 2e-039
Identities = 41/62 (66%), Positives = 41/62 (66%)
Frame = +3 / +1
Query: 330 SSIPKGRCXXXXXXXXXXXXXXXXXXXXXTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 509
SSIPKGRC TSWISWYCNLRGNEFFCEVDDDYIQDDFNLC
Sbjct: 307 SSIPKGRCSEGESESDSEASDVGGSDGEDTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 486
Query: 510 GL 515
GL
Sbjct: 487 GL 492
Score = 83.1 bits (175), Expect(2) = 1e-021
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +2 / +3
Query: 341 QGPLLRRGV*F***SIRC*WL*WRRHLVDFMVLQLKRE*VLL*SR**LH 487
QGPLLRRGV *SIRC WL*WRR+L+DFMVLQ KRE*VLL*SR**LH
Sbjct: 318 QGPLLRRGVRVGQ*SIRCWWL*WRRYLMDFMVLQPKRE*VLL*SR**LH 464
Score = 76.2 bits (160), Expect(2) = 2e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +1
Query: 174 GAGVGAGLDRKRISDALDKHLEKAVASPSTSRGSAGGGGVRD 299
G+ GAGLDRKRIS+ALDKHLEKA ASPSTSRGSAG G R+
Sbjct: 166 GSAGGAGLDRKRISEALDKHLEKAAASPSTSRGSAGARGNRN 291
Score = 66.1 bits (138), Expect(2) = 2e-040
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -2 / -2
Query: 277 ADPLDVDGDATAFSRCLSSASLIRFRSRPAPTPAP 173
A+PLDV+GDA AFSRCLSSASL+RFRS PAP P
Sbjct: 269 AEPLDVEGDAAAFSRCLSSASLMRFRSSPAPPADP 165
Score = 40.9 bits (83), Expect(2) = 1e-021
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 200 PETDQRRARQAP*EGGRIAVHIEGVSG 280
PE QR AR AP EGGR+A+H+E + G
Sbjct: 192 PEAHQRSAR*APGEGGRVALHVERLGG 272
>gb|AV931983.1|AV931983 AV931983 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal0a11 5', mRNA sequence
Length = 483
Score = 120 bits (257), Expect(2) = 2e-040
Identities = 51/59 (86%), Positives = 57/59 (96%)
Frame = -1 / -2
Query: 509 TKVEVVLNVVIIDFTEELIPS*VAIP*NPRGVFSIRATNI*CFTIRIRLPFGAAALGDG 333
TK+EV+LNV+IIDFTEELIPS*VAIP*NP G+FSIRATNI*CFT+R+ LPFGAAALGDG
Sbjct: 476 TKIEVILNVIIIDFTEELIPS*VAIP*NP*GIFSIRATNI*CFTVRL*LPFGAAALGDG 300
Score = 107 bits (228), Expect(2) = 2e-039
Identities = 41/62 (66%), Positives = 41/62 (66%)
Frame = +3 / +3
Query: 330 SSIPKGRCXXXXXXXXXXXXXXXXXXXXXTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 509
SSIPKGRC TSWISWYCNLRGNEFFCEVDDDYIQDDFNLC
Sbjct: 297 SSIPKGRCSEGESESDSEASDVGGSDGEDTSWISWYCNLRGNEFFCEVDDDYIQDDFNLC 476
Query: 510 GL 515
GL
Sbjct: 477 GL 482
Score = 83.1 bits (175), Expect(2) = 1e-021
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +2 / +2
Query: 341 QGPLLRRGV*F***SIRC*WL*WRRHLVDFMVLQLKRE*VLL*SR**LH 487
QGPLLRRGV *SIRC WL*WRR+L+DFMVLQ KRE*VLL*SR**LH
Sbjct: 308 QGPLLRRGVRVGQ*SIRCWWL*WRRYLMDFMVLQPKRE*VLL*SR**LH 454
Score = 76.2 bits (160), Expect(2) = 2e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +3
Query: 174 GAGVGAGLDRKRISDALDKHLEKAVASPSTSRGSAGGGGVRD 299
G+ GAGLDRKRIS+ALDKHLEKA ASPSTSRGSAG G R+
Sbjct: 156 GSAGGAGLDRKRISEALDKHLEKAAASPSTSRGSAGARGNRN 281
Score = 66.1 bits (138), Expect(2) = 2e-040
Identities = 27/35 (77%), Positives = 30/35 (85%)
Frame = -2 / -3
Query: 277 ADPLDVDGDATAFSRCLSSASLIRFRSRPAPTPAP 173
A+PLDV+GDA AFSRCLSSASL+RFRS PAP P
Sbjct: 259 AEPLDVEGDAAAFSRCLSSASLMRFRSSPAPPADP 155
Score = 40.9 bits (83), Expect(2) = 1e-021
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 200 PETDQRRARQAP*EGGRIAVHIEGVSG 280
PE QR AR AP EGGR+A+H+E + G
Sbjct: 182 PEAHQRSAR*APGEGGRVALHVERLGG 262
>gb|BF617114.2|BF617114 HVSMEc0014K08f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0014K08f, mRNA sequence
Length = 782
Score = 112 bits (240), Expect(4) = 2e-034
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +3 / +3
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIES 572
TSWISW+C+LRGNEFF E+DDDYIQDDFNLCGLS+QVP YDYAL LIL+ E+
Sbjct: 381 TSWISWFCSLRGNEFFWEIDDDYIQDDFNLCGLSNQVPIYDYALGLILNNEA 536
Score = 38.2 bits (77), Expect(4) = 2e-034
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +3 / +3
Query: 162 YKQGGAGVGAGLDRKRISDALDKHLEKAVASPS 260
Y+ G G A +DRKRI +AL+KH E+ S S
Sbjct: 141 YRDRGFGGAAEMDRKRIKEALEKHTERPSPSTS 239
Score = 33.6 bits (67), Expect(4) = 2e-034
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3 / +2
Query: 627 EMLYGLIHARYILTSKGL 680
+MLYGLIHARYIL G+
Sbjct: 596 KMLYGLIHARYILNLPGV 649
Score = 24.4 bits (47), Expect(4) = 2e-034
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +1
Query: 726 PRVYCCG 746
PRVYCCG
Sbjct: 703 PRVYCCG 723
>gb|BG300415.1|BG300415 HVSMEb0016P04f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0016P04f, mRNA sequence
Length = 625
Score = 130 bits (279), Expect = 1e-029
Identities = 46/61 (75%), Positives = 55/61 (90%)
Frame = +3 / +3
Query: 798 KIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYEHLKPQKLSQRYVPRVFGFKLH 977
KIYCPKCED+YYPRSK+Q N DGAYFGTTFPH+F+MT+ LKPQK +Q+YVPR+FGFK+
Sbjct: 3 KIYCPKCEDLYYPRSKHQANTDGAYFGTTFPHMFMMTHSQLKPQKPAQQYVPRIFGFKVQ 182
Query: 978 K 980
K
Sbjct: 183 K 185
>gb|BJ456143.1|BJ456143 BJ456143 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak19o11 3', mRNA sequence
Length = 329
Score = 101 bits (216), Expect(2) = 1e-023
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = +3 / -2
Query: 855 NIDGAYFGTTFPHLFLMTYEHLKPQKLSQRYVPRVFGFKLHKP* 986
+I GAY+GTTFPHLFLMTY+HLKPQK SQRYVPRVFGFKLHKP*
Sbjct: 289 DIXGAYYGTTFPHLFLMTYDHLKPQKTSQRYVPRVFGFKLHKP* 158
Score = 28.6 bits (56), Expect(2) = 1e-023
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / -2
Query: 813 KCEDIYYPRSKYQ 851
KC D YY RSKYQ
Sbjct: 328 KCXDXYYXRSKYQ 290
>gb|BU983341.1|BU983341 HA29G12r HA Hordeum vulgare subsp. vulgare cDNA clone HA29G12
5-PRIME, mRNA sequence
Length = 452
Score = 105 bits (223), Expect(2) = 2e-023
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +3 / +3
Query: 855 NIDGAYFGTTFPHLFLMTYEHLKPQKLSQRYVPRVFGFKLHKP* 986
+IDGAY+GTTFPHLFLMTY+HLKPQK SQRYVPRVFGFKLHKP*
Sbjct: 36 DIDGAYYGTTFPHLFLMTYDHLKPQKTSQRYVPRVFGFKLHKP* 167
Score = 24.4 bits (47), Expect(2) = 2e-023
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +3
Query: 828 YYPRSKYQ 851
YYPRSKYQ
Sbjct: 12 YYPRSKYQ 35
>gb|BF624483.3|BF624483 HVSMEa0016L04f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0016L04f, mRNA sequence
Length = 765
Score = 109 bits (232), Expect(2) = 3e-023
Identities = 42/62 (67%), Positives = 48/62 (77%)
Frame = +3 / +1
Query: 417 TSWISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDMFTE 596
TSWISW+C+LRGNEF CE+ DDY+QDDFNL GLS Q P D AL L LD SS GD+F+E
Sbjct: 343 TSWISWFCSLRGNEFLCEIGDDYVQDDFNLWGLSHQAPSCDSALGLSLDFASSEGDVFSE 522
Query: 597 EQ 602
Q
Sbjct: 523 GQ 528
Score = 23.1 bits (44), Expect(2) = 3e-023
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3 / +1
Query: 174 GAGVGAGLDRKRISDALD 227
G G + +DRKRI +AL+
Sbjct: 115 GFGGASFMDRKRIKEALE 168
>gb|CA026092.1|CA026092 HZ54G07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ54G07
5-PRIME, mRNA sequence
Length = 410
Score = 105 bits (223), Expect = 8e-022
Identities = 41/48 (85%), Positives = 44/48 (91%)
Frame = +3 / +1
Query: 834 PRSKYQGNIDGAYFGTTFPHLFLMTYEHLKPQKLSQRYVPRVFGFKLH 977
PRSKYQGNIDGAYFGTTFPHLFLMT+ HLKPQK SQ+YVPR + FKLH
Sbjct: 1 PRSKYQGNIDGAYFGTTFPHLFLMTFLHLKPQKPSQQYVPRCWFFKLH 144
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 602,403,594
Number of Sequences: 312970
Number of extensions: 9543690
Number of successful extensions: 62974
Number of sequences better than 1.0e-020: 57
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 17050633752
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)