TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448753.2.1
(537 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF617538.3|BF617538 HVSMEc0017O04f Hordeum vulgare seedl... 162 2e-046
gb|CA020711.1|CA020711 HZ37E17r HZ Hordeum vulgare subsp. v... 162 2e-046
gb|BE215918.2|BE215918 HV_CEb0008N12f Hordeum vulgare seedl... 162 2e-046
gb|BQ459489.1|BQ459489 HA08P01r HA Hordeum vulgare subsp. v... 162 2e-046
gb|BJ464811.1|BJ464811 BJ464811 K. Sato unpublished cDNA li... 160 1e-045
gb|BU995403.1|BU995403 HM10C12r HM Hordeum vulgare subsp. v... 165 2e-040
gb|BQ762699.1|BQ762699 EBro02_SQ004_E20_R root, 3 week, hyd... 145 2e-034
gb|BU999319.1|BU999319 HI14C10r HI Hordeum vulgare subsp. v... 145 2e-034
gb|BU999391.1|BU999391 HI14F24r HI Hordeum vulgare subsp. v... 145 2e-034
gb|BF628294.2|BF628294 HVSMEb0003K10f Hordeum vulgare seedl... 142 2e-033
gb|BQ764762.1|BQ764762 EBca01_SQ004_G20_R carpel, pre-anthe... 141 3e-033
gb|BE559056.1|BE559056 HV_CEb0022I18f Hordeum vulgare seedl... 135 2e-031
gb|BF262024.2|BF262024 HV_CEa0002N17f Hordeum vulgare seedl... 126 1e-028
gb|BI958703.1|BI958703 HVSMEn0016E15f Hordeum vulgare rachi... 125 2e-028
gb|BG368461.1|BG368461 HVSMEi0019B01f Hordeum vulgare 20 DA... 124 5e-028
gb|BE411073.1|BE411073 ISC002.A11F990322 ITEC ISC Barley Le... 123 7e-028
gb|AL505139.1|AL505139 AL505139 Hordeum vulgare Barke roots... 123 7e-028
gb|AL509144.1|AL509144 AL509144 Hordeum vulgare Barke devel... 123 7e-028
gb|BG301140.1|BG301140 HVSMEb0019L03f Hordeum vulgare seedl... 123 7e-028
gb|BG343608.1|BG343608 HVSMEg0006A07f Hordeum vulgare pre-a... 123 7e-028
gb|BE231114.2|BE231114 HVSMEg0016N01f Hordeum vulgare pre-a... 123 7e-028
gb|BJ453522.1|BJ453522 BJ453522 K. Sato unpublished cDNA li... 123 7e-028
gb|BJ461068.1|BJ461068 BJ461068 K. Sato unpublished cDNA li... 123 7e-028
gb|BQ469633.1|BQ469633 HZ01G11r HZ Hordeum vulgare subsp. v... 123 7e-028
gb|BQ471702.1|BQ471702 HV03D11r HV Hordeum vulgare subsp. v... 123 7e-028
gb|BM377503.2|BM377503 EBem04_SQ003_F08_R embryo, 12 DPA, n... 123 7e-028
gb|BM376493.2|BM376493 EBem05_SQ002_G04_R embryo, 14 DPA, n... 123 7e-028
gb|BM375524.2|BM375524 EBem06_SQ003_J16_R embryo, 21 DPA, n... 123 7e-028
gb|BM098998.2|BM098998 EBpi05_SQ002_K14_R pistil, 8 DPA, no... 123 7e-028
gb|BM370309.2|BM370309 EBro08_SQ003_M20_R root, 3 week, dro... 123 7e-028
gb|BM370561.2|BM370561 EBro08_SQ004_J15_R root, 3 week, dro... 123 7e-028
gb|BQ755111.1|BQ755111 EBed02_SQ003_M03_R endosperm, 8 DPA,... 123 7e-028
gb|BQ762387.1|BQ762387 EBro01_SQ005_N15 _R root, 3 week, hy... 123 7e-028
gb|BQ763259.1|BQ763259 EBro02_SQ007_P18_R root, 3 week, hyd... 123 7e-028
gb|BU976484.1|BU976484 HA03M13r HA Hordeum vulgare subsp. v... 123 7e-028
gb|BU976485.1|BU976485 HA03M13u HA Hordeum vulgare subsp. v... 123 7e-028
gb|BU978152.1|BU978152 HA12K16r HA Hordeum vulgare subsp. v... 123 7e-028
gb|BU981088.1|BU981088 HA22J18r HA Hordeum vulgare subsp. v... 123 7e-028
gb|BU982679.1|BU982679 HA27E15r HA Hordeum vulgare subsp. v... 123 7e-028
gb|BU989672.1|BU989672 HF22G04r HF Hordeum vulgare subsp. v... 123 7e-028
gb|BU996297.1|BU996297 HM13C17r HM Hordeum vulgare subsp. v... 123 7e-028
gb|BU996923.1|BU996923 HI06E18r HI Hordeum vulgare subsp. v... 123 7e-028
gb|BU998475.1|BU998475 HI11C23r HI Hordeum vulgare subsp. v... 123 7e-028
gb|BU999425.1|BU999425 HI14H13r HI Hordeum vulgare subsp. v... 123 7e-028
gb|BU999809.1|BU999809 HI15O09r HI Hordeum vulgare subsp. v... 123 7e-028
gb|CA023990.1|CA023990 HZ48A20r HZ Hordeum vulgare subsp. v... 123 7e-028
gb|CA032937.1|CA032937 HX14K06r HX Hordeum vulgare subsp. v... 123 7e-028
gb|CB858507.1|CB858507 HI07E19w HI Hordeum vulgare subsp. v... 123 7e-028
gb|BI780514.2|BI780514 EBem08_SQ001_K14_R embryo, 40 DPA, n... 122 1e-027
gb|BF065586.1|BF065586 HV_CEb0012N15f Hordeum vulgare seedl... 122 2e-027
gb|BF257818.2|BF257818 HVSMEf0013O18f Hordeum vulgare seedl... 122 2e-027
gb|BF629048.2|BF629048 HVSMEb0009K20f Hordeum vulgare seedl... 121 3e-027
gb|CA023278.1|CA023278 HZ45M01r HZ Hordeum vulgare subsp. v... 121 3e-027
gb|BQ753625.1|BQ753625 EBan01_SQ004_M15_R anther, yellow st... 121 6e-027
gb|BJ463423.1|BJ463423 BJ463423 K. Sato unpublished cDNA li... 120 9e-027
gb|BE060883.3|BE060883 HVSMEg0013L11f Hordeum vulgare pre-a... 119 1e-026
gb|BG344945.2|BG344945 HVSMEg0018A02f Hordeum vulgare pre-a... 118 3e-026
gb|BM443725.2|BM443725 EBem09_SQ001_E18_R embryo, 1 Day ger... 118 3e-026
gb|BU983821.1|BU983821 HA31C10r HA Hordeum vulgare subsp. v... 118 3e-026
gb|BF264077.3|BF264077 HV_CEa0008H13f Hordeum vulgare seedl... 117 4e-026
gb|BI960101.1|BI960101 HVSMEn0023E01f Hordeum vulgare rachi... 115 3e-025
gb|BM368849.2|BM368849 EBem08_SQ004_M10_R embryo, 40 DPA, n... 115 3e-025
gb|BF625909.2|BF625909 HVSMEa0014D19f Hordeum vulgare seedl... 114 4e-025
gb|BE196492.1|BE196492 HVSMEh0092H04f Hordeum vulgare 5-45 ... 114 4e-025
gb|BF626822.2|BF626822 HVSMEb0001G21f Hordeum vulgare seedl... 114 4e-025
gb|BF628104.2|BF628104 HVSMEb0003C08f Hordeum vulgare seedl... 114 4e-025
gb|BF628172.2|BF628172 HVSMEb0003F07f Hordeum vulgare seedl... 114 4e-025
gb|BF627186.2|BF627186 HVSMEb0004C22f Hordeum vulgare seedl... 114 4e-025
gb|BF628603.2|BF628603 HVSMEb0006L14f Hordeum vulgare seedl... 114 4e-025
gb|BF629310.2|BF629310 HVSMEb0010M05f Hordeum vulgare seedl... 114 4e-025
gb|BF630702.2|BF630702 HVSMEb0013F02f Hordeum vulgare seedl... 114 4e-025
gb|BG301218.1|BG301218 HVSMEb0019P16f Hordeum vulgare seedl... 114 4e-025
gb|BF257799.2|BF257799 HVSMEf0013O11f Hordeum vulgare seedl... 114 4e-025
gb|AW982473.2|AW982473 HVSMEg0003F20f Hordeum vulgare pre-a... 114 4e-025
gb|BI948506.1|BI948506 HVSMEl0009O07f Hordeum vulgare spike... 114 4e-025
gb|BI949736.1|BI949736 HVSMEl0015K20f Hordeum vulgare spike... 114 4e-025
gb|BI953872.1|BI953872 HVSMEm0015C03f Hordeum vulgare green... 114 4e-025
gb|BI957396.1|BI957396 HVSMEn0009F12f Hordeum vulgare rachi... 114 4e-025
gb|BI957450.1|BI957450 HVSMEn0009J24f Hordeum vulgare rachi... 114 4e-025
gb|BF262864.2|BF262864 HV_CEa0005C19f Hordeum vulgare seedl... 114 4e-025
gb|BF264367.2|BF264367 HV_CEa0009D18f Hordeum vulgare seedl... 114 4e-025
gb|BF264458.2|BF264458 HV_CEa0009H17f Hordeum vulgare seedl... 114 4e-025
gb|BF266157.2|BF266157 HV_CEa0014F08f Hordeum vulgare seedl... 114 4e-025
gb|BF267744.2|BF267744 HV_CEa0018M09f Hordeum vulgare seedl... 114 4e-025
gb|BE214770.2|BE214770 HV_CEb0004I16f Hordeum vulgare seedl... 114 4e-025
gb|BE559066.2|BE559066 HV_CEb0022J16f Hordeum vulgare seedl... 114 4e-025
gb|BF065042.2|BF065042 HV_CEb0022K17f Hordeum vulgare seedl... 114 4e-025
gb|BI958319.1|BI958319 HVSMEn0014G08f Hordeum vulgare rachi... 114 4e-025
gb|BI959901.1|BI959901 HVSMEn0022F01f Hordeum vulgare rachi... 114 4e-025
gb|BE231161.2|BE231161 HVSMEg0017E02f Hordeum vulgare pre-a... 114 4e-025
gb|AW982360.3|AW982360 HVSMEg0003B01f Hordeum vulgare pre-a... 114 4e-025
gb|BG343387.2|BG343387 HVSMEg0005J21f Hordeum vulgare pre-a... 114 4e-025
gb|BE196577.3|BE196577 HVSMEh0092K23f Hordeum vulgare 5-45 ... 114 4e-025
gb|BE559054.3|BE559054 HV_CEb0022I14f Hordeum vulgare seedl... 114 4e-025
gb|AV924396.1|AV924396 AV924396 K. Sato unpublished cDNA li... 114 4e-025
gb|BM444156.1|BM444156 EBem09_SQ004_F07_R embryo, 1 Day ger... 114 4e-025
gb|BQ467706.1|BQ467706 HS04J23r HS Hordeum vulgare subsp. v... 114 4e-025
gb|BQ469022.1|BQ469022 HM03C06r HM Hordeum vulgare subsp. v... 114 4e-025
gb|BQ470366.1|BQ470366 HX02L16r HX Hordeum vulgare subsp. v... 114 4e-025
gb|BQ661509.1|BQ661509 HM03M15u HM Hordeum vulgare subsp. v... 114 4e-025
gb|BQ739816.1|BQ739816 HB03B07 HB Hordeum vulgare subsp. vu... 114 4e-025
gb|BI780380.2|BI780380 EBem06_SQ001_K09_R embryo, 21 DPA, n... 114 4e-025
gb|BM369613.2|BM369613 EBem07_SQ004_C03_R embryo, 28 DPA, n... 114 4e-025
gb|BI780813.2|BI780813 EBes01_SQ002_E13_R embryo sac, 4-6 D... 114 4e-025
gb|BM101204.2|BM101204 EBpi01_SQ003_D02_R pistil, 1 DPA, no... 114 4e-025
gb|BM374527.2|BM374527 EBpi03_SQ003_N23_R pistil, 4 DPA, no... 114 4e-025
gb|BM097219.2|BM097219 EBpi07_SQ002_M10_R pistil, 12 DPA, n... 114 4e-025
gb|BQ754092.1|BQ754092 EBca01_SQ002_N03_R carpel, pre-anthe... 114 4e-025
gb|BQ758422.1|BQ758422 EBma05_SQ003_F22_R maternal, 12 DPA,... 114 4e-025
gb|BU978393.1|BU978393 HA13B15r HA Hordeum vulgare subsp. v... 114 4e-025
gb|BU981537.1|BU981537 HA23O18r HA Hordeum vulgare subsp. v... 114 4e-025
gb|BU981670.1|BU981670 HA24E18r HA Hordeum vulgare subsp. v... 114 4e-025
gb|BU981886.1|BU981886 HA24O17r HA Hordeum vulgare subsp. v... 114 4e-025
gb|BU995479.1|BU995479 HM10G04r HM Hordeum vulgare subsp. v... 114 4e-025
gb|BU996085.1|BU996085 HM12G08r HM Hordeum vulgare subsp. v... 114 4e-025
gb|BU996806.1|BU996806 HM14N05r HM Hordeum vulgare subsp. v... 114 4e-025
gb|BU997601.1|BU997601 HI08H11r HI Hordeum vulgare subsp. v... 114 4e-025
gb|BU998295.1|BU998295 HI10J15r HI Hordeum vulgare subsp. v... 114 4e-025
gb|BU998521.1|BU998521 HI11F05r HI Hordeum vulgare subsp. v... 114 4e-025
gb|CA001627.1|CA001627 HS05B23r HS Hordeum vulgare subsp. v... 114 4e-025
gb|CA003336.1|CA003336 HS14B19r HS Hordeum vulgare subsp. v... 114 4e-025
gb|CA003737.1|CA003737 HS15G12r HS Hordeum vulgare subsp. v... 114 4e-025
gb|CA012689.1|CA012689 HT06C11r HT Hordeum vulgare subsp. v... 114 4e-025
gb|CA018389.1|CA018389 HV08H18r HV Hordeum vulgare subsp. v... 114 4e-025
gb|CA021103.1|CA021103 HZ39B23r HZ Hordeum vulgare subsp. v... 114 4e-025
gb|CA021603.1|CA021603 HZ40J03r HZ Hordeum vulgare subsp. v... 114 4e-025
gb|CA027545.1|CA027545 HZ59E08r HZ Hordeum vulgare subsp. v... 114 4e-025
gb|CA028213.1|CA028213 HZ61F08r HZ Hordeum vulgare subsp. v... 114 4e-025
gb|CA030147.1|CA030147 HX06D15r HX Hordeum vulgare subsp. v... 114 4e-025
gb|CA030707.1|CA030707 HX07O02r HX Hordeum vulgare subsp. v... 114 4e-025
gb|CA030928.1|CA030928 HX08I15r HX Hordeum vulgare subsp. v... 114 4e-025
gb|CA031359.1|CA031359 HX09L18r HX Hordeum vulgare subsp. v... 114 4e-025
gb|CA032957.1|CA032957 HX14L05r HX Hordeum vulgare subsp. v... 114 4e-025
gb|CB877100.1|CB877100 HP03J02T HP Hordeum vulgare subsp. v... 114 4e-025
gb|CB877146.1|CB877146 HP03L12T HP Hordeum vulgare subsp. v... 114 4e-025
gb|CB877627.1|CB877627 HP05J23T HP Hordeum vulgare subsp. v... 114 4e-025
gb|CB878112.1|CB878112 HP07G04T HP Hordeum vulgare subsp. v... 114 4e-025
gb|CB878478.1|CB878478 HP08K23T HP Hordeum vulgare subsp. v... 114 4e-025
gb|CK123045.1|CK123045 BES1824101n05 BES1824 Hordeum vulgar... 114 4e-025
gb|CK123462.1|CK123462 BES1824104b23 BES1824 Hordeum vulgar... 114 4e-025
gb|BG368050.2|BG368050 HVSMEi0015H14f Hordeum vulgare 20 DA... 114 5e-025
gb|BM098148.2|BM098148 EBpi03_SQ002_K24_R pistil, 4 DPA, no... 114 5e-025
gb|BI777431.2|BI777431 EBro04_SQ001_D10_R root, 3 week, sal... 114 5e-025
gb|BI777554.2|BI777554 EBro04_SQ001_J06_R root, 3 week, sal... 113 7e-025
gb|BU998708.1|BU998708 HI11O21r HI Hordeum vulgare subsp. v... 113 7e-025
gb|BF630241.2|BF630241 HVSMEb0008H01f Hordeum vulgare seedl... 113 1e-024
gb|BI952670.1|BI952670 HVSMEm0007F08f Hordeum vulgare green... 113 1e-024
gb|BF263436.2|BF263436 HV_CEa0006L21f Hordeum vulgare seedl... 113 1e-024
gb|CB879111.1|CB879111 HP10P16T HP Hordeum vulgare subsp. v... 113 1e-024
gb|BG301045.1|BG301045 HVSMEb0019F18f Hordeum vulgare seedl... 112 1e-024
gb|BI958152.1|BI958152 HVSMEn0013K09f Hordeum vulgare rachi... 112 1e-024
gb|BG300057.1|BG300057 HVSMEb0011D12f Hordeum vulgare seedl... 112 2e-024
gb|BI958198.1|BI958198 HVSMEn0013N10f Hordeum vulgare rachi... 112 2e-024
gb|BM377387.2|BM377387 EBem05_SQ004_P17_R embryo, 14 DPA, n... 112 2e-024
gb|CA003168.1|CA003168 HS09J23r HS Hordeum vulgare subsp. v... 112 2e-024
gb|BF629762.1|BF629762 HVSMEb0013L19f Hordeum vulgare seedl... 111 3e-024
gb|BE216109.2|BE216109 HV_CEb0009H07f Hordeum vulgare seedl... 111 3e-024
gb|AW983214.3|AW983214 HVSMEg0008L18f Hordeum vulgare pre-a... 111 4e-024
gb|BE060107.3|BE060107 HVSMEg0011H22f Hordeum vulgare pre-a... 111 4e-024
gb|BQ764920.1|BQ764920 EBca01_SQ005_C12_R carpel, pre-anthe... 111 4e-024
gb|U49482.1|HVU49482 Hordeum vulgare low temperature-respon... 111 4e-024
gb|AU090242.1|AU090242 AU090242 Hordeum vulgare subsp. vulg... 111 5e-024
gb|BF623713.2|BF623713 HVSMEa0005A15f Hordeum vulgare seedl... 111 5e-024
gb|BG299266.1|BG299266 HVSMEa0019B07f Hordeum vulgare seedl... 111 5e-024
gb|BG368752.1|BG368752 HVSMEi0020I03f Hordeum vulgare 20 DA... 111 5e-024
gb|BI955687.1|BI955687 HVSMEm0024A20f Hordeum vulgare green... 111 5e-024
gb|BF064835.2|BF064835 HV_CEb0019M17f Hordeum vulgare seedl... 111 5e-024
gb|BF266182.2|BF266182 HV_CEa0014G12f Hordeum vulgare seedl... 110 7e-024
gb|BF628126.3|BF628126 HVSMEb0003D07f Hordeum vulgare seedl... 110 7e-024
gb|BQ766713.1|BQ766713 EBro08_SQ006_M20 _R root, 3 week, dr... 110 7e-024
gb|CA024288.1|CA024288 HZ48O05r HZ Hordeum vulgare subsp. v... 110 7e-024
gb|BF622285.2|BF622285 HVSMEa0002I13f Hordeum vulgare seedl... 110 9e-024
gb|BF622957.2|BF622957 HVSMEa0012E15f Hordeum vulgare seedl... 110 9e-024
gb|BF628541.2|BF628541 HVSMEb0006H16f Hordeum vulgare seedl... 110 9e-024
gb|BF630328.2|BF630328 HVSMEb0008M06f Hordeum vulgare seedl... 110 9e-024
gb|BG300222.1|BG300222 HVSMEb0011J20f Hordeum vulgare seedl... 110 9e-024
gb|BG345046.1|BG345046 HVSMEg0018G20f Hordeum vulgare pre-a... 110 9e-024
gb|BG367529.1|BG367529 HVSMEi0012J10f Hordeum vulgare 20 DA... 110 9e-024
gb|BE213986.1|BE213986 HV_CEb0001N08f Hordeum vulgare seedl... 110 9e-024
gb|BF264369.2|BF264369 HV_CEa0009D20f Hordeum vulgare seedl... 110 9e-024
gb|BF265447.2|BF265447 HV_CEa0012E18f Hordeum vulgare seedl... 110 9e-024
gb|BE215727.2|BE215727 HV_CEb0008F06f Hordeum vulgare seedl... 110 9e-024
gb|BF630685.3|BF630685 HVSMEb0013B08f Hordeum vulgare seedl... 110 9e-024
gb|BG344423.2|BG344423 HVSMEg0009D15f Hordeum vulgare pre-a... 110 9e-024
gb|BQ467056.1|BQ467056 HS02H01r HS Hordeum vulgare subsp. v... 110 9e-024
gb|BM368356.2|BM368356 EBed01_SQ002_O17_R endosperm, 6 DPA,... 110 9e-024
gb|BM377196.2|BM377196 EBem05_SQ004_G13_R embryo, 14 DPA, n... 110 9e-024
gb|BM100445.2|BM100445 EBma01_SQ005_D21_R maternal, 4 DPA, ... 110 9e-024
gb|BI778790.2|BI778790 EBro01_SQ001_I06_R root, 3 week, hyd... 110 9e-024
gb|BM371122.2|BM371122 EBro04_SQ003_I20_R root, 3 week, sal... 110 9e-024
gb|BI778167.2|BI778167 EBro07_SQ002_G15_R root, 3 week, red... 110 9e-024
gb|BM370579.2|BM370579 EBro08_SQ004_K10_R root, 3 week, dro... 110 9e-024
gb|BQ753300.1|BQ753300 EBan01_SQ001_G10_R anther, yellow st... 110 9e-024
gb|BQ760747.1|BQ760747 EBro03_SQ003_F20_R root, 3 week, wat... 110 9e-024
gb|BQ762920.1|BQ762920 EBro02_SQ006_E14_R root, 3 week, hyd... 110 9e-024
gb|BQ765032.1|BQ765032 EBca01_SQ005_I14_R carpel, pre-anthe... 110 9e-024
gb|BQ766329.1|BQ766329 EBro08_SQ005_M13 _R root, 3 week, dr... 110 9e-024
gb|BU996492.1|BU996492 HM13M16r HM Hordeum vulgare subsp. v... 110 9e-024
gb|BU996912.1|BU996912 HI06E04r HI Hordeum vulgare subsp. v... 110 9e-024
gb|BU997511.1|BU997511 HI08D09r HI Hordeum vulgare subsp. v... 110 9e-024
gb|BU997946.1|BU997946 HI09I02r HI Hordeum vulgare subsp. v... 110 9e-024
gb|CA001783.1|CA001783 HS05J05r HS Hordeum vulgare subsp. v... 110 9e-024
gb|CA001963.1|CA001963 HS06B24r HS Hordeum vulgare subsp. v... 110 9e-024
gb|CA002631.1|CA002631 HS08B09r HS Hordeum vulgare subsp. v... 110 9e-024
gb|CA030116.1|CA030116 HX06C05r HX Hordeum vulgare subsp. v... 110 9e-024
gb|CA032053.1|CA032053 HX11N23r HX Hordeum vulgare subsp. v... 110 9e-024
gb|CB882705.1|CB882705 HL02J22w HL Hordeum vulgare subsp. v... 110 9e-024
gb|CV056544.1|CV056544 BNEL19A10 Barley EST endosperm libra... 110 9e-024
gb|CV057078.1|CV057078 BNEL23g5 Barley EST endosperm librar... 110 9e-024
gb|CV058731.1|CV058731 BNEL40c12 Barley EST endosperm libra... 110 9e-024
gb|CV061567.1|CV061567 BNEL6D5 Barley EST endosperm library... 110 9e-024
gb|CV062681.1|CV062681 BNEL81g4 Barley EST endosperm librar... 110 9e-024
gb|CV062951.1|CV062951 BNEL84h7 Barley EST endosperm librar... 110 9e-024
gb|CV064316.1|CV064316 BNEL9E7 Barley EST endosperm library... 110 9e-024
gb|CK124571.1|CK124571 BES1824109j04 BES1824 Hordeum vulgar... 110 9e-024
gb|BF627511.2|BF627511 HVSMEb0005A21f Hordeum vulgare seedl... 109 1e-023
gb|BF259750.2|BF259750 HVSMEf0020C15f Hordeum vulgare seedl... 109 1e-023
gb|BF263268.2|BF263268 HV_CEa0006E20f Hordeum vulgare seedl... 109 1e-023
gb|BE558997.3|BE558997 HV_CEb0022C22f Hordeum vulgare seedl... 109 1e-023
gb|AV926792.1|AV926792 AV926792 K. Sato unpublished cDNA li... 109 1e-023
gb|BI779353.2|BI779353 EBro01_SQ003_M07_R root, 3 week, hyd... 109 1e-023
gb|CK122461.1|CK122461 BES1824103j04 BES1824 Hordeum vulgar... 109 1e-023
gb|BQ762398.1|BQ762398 EBro01_SQ005_P15_R root, 3 week, hyd... 77 1e-023
gb|BE455628.2|BE455628 HVSMEg0018F18f Hordeum vulgare pre-a... 109 2e-023
gb|BG367122.1|BG367122 HVSMEi0010K03f Hordeum vulgare 20 DA... 109 2e-023
gb|BF262197.2|BF262197 HV_CEa0003J10f Hordeum vulgare seedl... 109 2e-023
gb|BE214466.3|BE214466 HV_CEb0003I15f Hordeum vulgare seedl... 109 2e-023
gb|BF265907.2|BF265907 HV_CEa0013K10f Hordeum vulgare seedl... 108 2e-023
gb|BE455168.3|BE455168 HVSMEh0096H06f Hordeum vulgare 5-45 ... 108 2e-023
gb|BQ467793.1|BQ467793 HS04O21r HS Hordeum vulgare subsp. v... 108 2e-023
gb|CA003725.1|CA003725 HS15F23r HS Hordeum vulgare subsp. v... 108 2e-023
gb|CA025818.1|CA025818 HZ53D19r HZ Hordeum vulgare subsp. v... 108 2e-023
gb|BI949367.1|BI949367 HVSMEl0013I23f Hordeum vulgare spike... 108 3e-023
gb|BQ463597.1|BQ463597 HI05N10r HI Hordeum vulgare subsp. v... 108 3e-023
gb|CK123750.1|CK123750 BES1824105e05 BES1824 Hordeum vulgar... 108 3e-023
gb|AL506566.1|AL506566 AL506566 Hordeum vulgare Barke devel... 107 5e-023
gb|BF629596.2|BF629596 HVSMEb0013H15f Hordeum vulgare seedl... 107 5e-023
gb|BI957612.1|BI957612 HVSMEn0010F22f Hordeum vulgare rachi... 107 5e-023
gb|BE456073.3|BE456073 HVSMEg0019J18f Hordeum vulgare pre-a... 107 5e-023
gb|BM096506.2|BM096506 EBma03_SQ001_O16_R maternal, 8 DPA, ... 107 5e-023
gb|BI777859.2|BI777859 EBro08_SQ002_F11_R root, 3 week, dro... 107 5e-023
gb|BQ760966.1|BQ760966 EBro03_SQ003_P19_R root, 3 week, wat... 107 5e-023
gb|BU998308.1|BU998308 HI10K08r HI Hordeum vulgare subsp. v... 107 5e-023
gb|BU998825.1|BU998825 HI12E10r HI Hordeum vulgare subsp. v... 107 5e-023
gb|CV056746.1|CV056746 BNEL20b5 Barley EST endosperm librar... 107 5e-023
gb|CK125146.1|CK125146 BES1824106n06 BES1824 Hordeum vulgar... 107 5e-023
gb|BG343478.2|BG343478 HVSMEg0005N23f Hordeum vulgare pre-a... 107 6e-023
gb|BF261381.3|BF261381 HV_CEa0001C05f Hordeum vulgare seedl... 107 6e-023
gb|BM374427.2|BM374427 EBpi03_SQ003_J13_R pistil, 4 DPA, no... 107 6e-023
gb|CA002595.1|CA002595 HS07P17r HS Hordeum vulgare subsp. v... 107 6e-023
gb|BI959485.1|BI959485 HVSMEn0019N16f Hordeum vulgare rachi... 106 9e-023
gb|BI777405.2|BI777405 EBro04_SQ001_C01_R root, 3 week, sal... 106 9e-023
gb|CA004430.1|CA004430 HS17I24r HS Hordeum vulgare subsp. v... 106 9e-023
gb|CV061486.1|CV061486 BNEL69e10 Barley EST endosperm libra... 106 9e-023
gb|CK125367.1|CK125367 BES1824107m24 BES1824 Hordeum vulgar... 106 9e-023
emb|Z48624.1|HVGRP3 H.vulgare mRNA for glycine-rich RNA bin... 106 9e-023
gb|BF262055.3|BF262055 HV_CEa0002P01f Hordeum vulgare seedl... 106 1e-022
gb|BM376283.2|BM376283 EBma01_SQ002_O13_R maternal, 4 DPA, ... 106 1e-022
gb|BF625906.2|BF625906 HVSMEa0014D13f Hordeum vulgare seedl... 105 2e-022
gb|BF626790.2|BF626790 HVSMEb0001F13f Hordeum vulgare seedl... 105 2e-022
gb|BF628566.2|BF628566 HVSMEb0006J08f Hordeum vulgare seedl... 105 2e-022
gb|BF631184.2|BF631184 HVSMEb0015D09f Hordeum vulgare seedl... 105 2e-022
gb|BE193987.2|BE193987 HVSMEh0083D05f Hordeum vulgare 5-45 ... 105 2e-022
gb|BG367672.1|BG367672 HVSMEi0013D03f Hordeum vulgare 20 DA... 105 2e-022
gb|BI955927.1|BI955927 HVSMEm0025B15f Hordeum vulgare green... 105 2e-022
gb|BI956089.1|BI956089 HVSMEm0025K03f Hordeum vulgare green... 105 2e-022
gb|BG416055.2|BG416055 HVSMEk0009J14f Hordeum vulgare testa... 105 2e-022
gb|BM101488.2|BM101488 EBem08_SQ001_N16_R embryo, 40 DPA, n... 105 2e-022
gb|BI779189.2|BI779189 EBro01_SQ003_E07_R root, 3 week, hyd... 105 2e-022
gb|BE060141.3|BE060141 HVSMEg0011A10f Hordeum vulgare pre-a... 100 2e-022
gb|BF625071.2|BF625071 HVSMEa0005L08f Hordeum vulgare seedl... 105 2e-022
gb|BG301187.1|BG301187 HVSMEb0019N17f Hordeum vulgare seedl... 105 2e-022
gb|AW982585.3|AW982585 HVSMEg0003K17f Hordeum vulgare pre-a... 105 2e-022
gb|BI778692.2|BI778692 EBro01_SQ001_B16_R root, 3 week, hyd... 105 2e-022
gb|BQ764985.1|BQ764985 EBca01_SQ005_O11_R carpel, pre-anthe... 105 2e-022
gb|BU997856.1|BU997856 HI09D16r HI Hordeum vulgare subsp. v... 105 2e-022
gb|CB882243.1|CB882243 HL01F02w HL Hordeum vulgare subsp. v... 105 2e-022
gb|BF628349.2|BF628349 HVSMEb0003M17f Hordeum vulgare seedl... 105 3e-022
gb|BQ765195.1|BQ765195 EBro03_SQ006_A18_R root, 3 week, wat... 105 3e-022
gb|BF264797.2|BF264797 HV_CEa0010G10f Hordeum vulgare seedl... 104 6e-022
gb|BQ468700.1|BQ468700 HM02A19r HM Hordeum vulgare subsp. v... 104 6e-022
gb|BQ468767.1|BQ468767 HM02E15r HM Hordeum vulgare subsp. v... 104 6e-022
gb|BU970705.1|BU970705 HB15G24r BC Hordeum vulgare subsp. v... 104 6e-022
gb|BU971368.1|BU971368 HB17G16r BC Hordeum vulgare subsp. v... 104 6e-022
gb|CA002835.1|CA002835 HS08K16r HS Hordeum vulgare subsp. v... 104 6e-022
gb|CK123661.1|CK123661 BES1824105a03 BES1824 Hordeum vulgar... 104 6e-022
gb|BI776516.2|BI776516 EBpi05_SQ001_L03_R pistil, 8 DPA, no... 103 8e-022
gb|BI779190.2|BI779190 EBro01_SQ003_E08_R root, 3 week, hyd... 103 8e-022
gb|CA002101.1|CA002101 HS06I11r HS Hordeum vulgare subsp. v... 103 8e-022
gb|CK122336.1|CK122336 BES1824102p01 BES1824 Hordeum vulgar... 103 8e-022
gb|CK125187.1|CK125187 BES1824106p10 BES1824 Hordeum vulgar... 103 8e-022
gb|BG343894.1|BG343894 HVSMEg0007A21f Hordeum vulgare pre-a... 103 1e-021
gb|BG416069.2|BG416069 HVSMEk0009K08f Hordeum vulgare testa... 103 1e-021
gb|BI952119.1|BI952119 HVSMEm0004K21f Hordeum vulgare green... 102 1e-021
gb|BE216066.1|BE216066 HV_CEb0009E20f Hordeum vulgare seedl... 102 1e-021
gb|BE519676.1|BE519676 HV_CEb0018E10f Hordeum vulgare seedl... 102 2e-021
gb|CB876955.1|CB876955 HP03A10T HP Hordeum vulgare subsp. v... 102 2e-021
gb|CV054938.1|CV054938 BNEL115a10 Barley EST endosperm libr... 101 4e-021
gb|BM369784.2|BM369784 EBem07_SQ004_J16_R embryo, 28 DPA, n... 100 5e-021
gb|CK124664.1|CK124664 BES1824109o15 BES1824 Hordeum vulgar... 100 5e-021
gb|BQ762001.1|BQ762001 EBpi01_SQ005_C18_R pistil, 1 DPA, no... 67 7e-021
gb|BI959704.1|BI959704 HVSMEn0020O03f Hordeum vulgare rachi... 100 7e-021
gb|BF257655.2|BF257655 HVSMEf0013H15f Hordeum vulgare seedl... 90 9e-021
>gb|BF617538.3|BF617538 HVSMEc0017O04f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0017O04f, mRNA sequence
Length = 762
Score = 162 bits (348), Expect(2) = 2e-046
Identities = 67/100 (67%), Positives = 80/100 (80%)
Frame = +2 / +2
Query: 98 SSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFG 277
SSN ++YQAIRCMSSSKLFVGGLSY TD+ SLRD F+ YG++I+AKII+DR++GRSRGFG
Sbjct: 167 SSNPTLYQAIRCMSSSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFG 346
Query: 278 FITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGFR 397
FITY I A+DGK L GRN+RV+ A ERT GFR
Sbjct: 347 FITYAAEEQASSAIMALDGKDLHGRNLRVSAATERTSGFR 466
Score = 112 bits (239), Expect(2) = 9e-031
Identities = 61/101 (60%), Positives = 64/101 (63%)
Frame = -1 / -1
Query: 399 LRKPPVLSLA*LTRMFRPSRVFPXXXXXXXXXXXXXXXVIKPKPLDLPDSRSRIILASIT 220
LRKP VLS+A LTR RP R FP VIKPKPLDLP SRS IILASI
Sbjct: 468 LRKPLVLSVAALTRRLRPCRSFPSKAMMADEACSSAA*VIKPKPLDLPVSRSTIILASII 289
Query: 219 CPYLANSSLRL*SSVP*ESPPTKSLDDDMHLIAW*TDIFEL 97
P +SLRL SSV ESPPTKS +DDMHLIA * FEL
Sbjct: 288 SP*WEKASLRLPSSVVYESPPTKSFEDDMHLIA**RVGFEL 166
Score = 96.8 bits (205), Expect(2) = 4e-021
Identities = 45/93 (48%), Positives = 58/93 (62%)
Frame = -3 / -3
Query: 382 PLVSMINPYVPSIQSLSIHGSDGXXXXXXXRVSYKAKTSGPPRLTIKDNLSFNNLSIFGK 203
PL NP V S+ LSI G DG +SYKAKTS P + + DNLS NN SI GK
Sbjct: 451 PLSGSTNP*VASM*ILSIQGHDGR*SLFFCCISYKAKTSRPSSVAVYDNLSINNFSIMGK 272
Query: 202 LVSETVIIGSIRKPSNKKLG**HASDCLVDRHI 104
+S+T ++ IRKPSN++L *HAS CL++ +
Sbjct: 271 GISQTALVCGIRKPSNEELRG*HASYCLIESRV 173
Score = 43.2 bits (88), Expect(2) = 2e-046
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2 / +2
Query: 23 SVSQLGTMMLANKLGGLLKNATSS 94
S Q+GTM LANKLGGLLK ATSS
Sbjct: 101 SRQQIGTMALANKLGGLLKKATSS 172
Score = 40.5 bits (82), Expect(2) = 9e-031
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1 / -1
Query: 96 FELVAFLSKPPSLLASIIVP 37
FELVAFLS+PPSLLA IVP
Sbjct: 174 FELVAFLSRPPSLLARAIVP 115
Score = 23.5 bits (45), Expect(2) = 4e-021
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3 / -3
Query: 79 LEQTTKLIS*HHCA*LRDGGERGK 8
LEQTTKLIS H + L G+
Sbjct: 157 LEQTTKLISQGHSSNLLPAAVEGE 86
>gb|CA020711.1|CA020711 HZ37E17r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ37E17
5-PRIME, mRNA sequence
Length = 587
Score = 162 bits (348), Expect(2) = 2e-046
Identities = 67/100 (67%), Positives = 80/100 (80%)
Frame = +2 / +1
Query: 98 SSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFG 277
SSN ++YQAIRCMSSSKLFVGGLSY TD+ SLRD F+ YG++I+AKII+DR++GRSRGFG
Sbjct: 196 SSNPTLYQAIRCMSSSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFG 375
Query: 278 FITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGFR 397
FITY I A+DGK L GRN+RV+ A ERT GFR
Sbjct: 376 FITYAAEEQASSAIMALDGKDLHGRNLRVSAATERTSGFR 495
Score = 112 bits (239), Expect(2) = 9e-031
Identities = 61/101 (60%), Positives = 64/101 (63%)
Frame = -1 / -1
Query: 399 LRKPPVLSLA*LTRMFRPSRVFPXXXXXXXXXXXXXXXVIKPKPLDLPDSRSRIILASIT 220
LRKP VLS+A LTR RP R FP VIKPKPLDLP SRS IILASI
Sbjct: 497 LRKPLVLSVAALTRRLRPCRSFPSKAMMADEACSSAA*VIKPKPLDLPVSRSTIILASII 318
Query: 219 CPYLANSSLRL*SSVP*ESPPTKSLDDDMHLIAW*TDIFEL 97
P +SLRL SSV ESPPTKS +DDMHLIA * FEL
Sbjct: 317 SP*WEKASLRLPSSVVYESPPTKSFEDDMHLIA**RVGFEL 195
Score = 96.8 bits (205), Expect(2) = 4e-021
Identities = 45/93 (48%), Positives = 58/93 (62%)
Frame = -3 / -3
Query: 382 PLVSMINPYVPSIQSLSIHGSDGXXXXXXXRVSYKAKTSGPPRLTIKDNLSFNNLSIFGK 203
PL NP V S+ LSI G DG +SYKAKTS P + + DNLS NN SI GK
Sbjct: 480 PLSGSTNP*VASM*ILSIQGHDGR*SLFFCCISYKAKTSRPSSVAVYDNLSINNFSIMGK 301
Query: 202 LVSETVIIGSIRKPSNKKLG**HASDCLVDRHI 104
+S+T ++ IRKPSN++L *HAS CL++ +
Sbjct: 300 GISQTALVCGIRKPSNEELRG*HASYCLIESRV 202
Score = 43.2 bits (88), Expect(2) = 2e-046
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2 / +1
Query: 23 SVSQLGTMMLANKLGGLLKNATSS 94
S Q+GTM LANKLGGLLK ATSS
Sbjct: 130 SRQQIGTMALANKLGGLLKKATSS 201
Score = 40.5 bits (82), Expect(2) = 9e-031
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1 / -1
Query: 96 FELVAFLSKPPSLLASIIVP 37
FELVAFLS+PPSLLA IVP
Sbjct: 203 FELVAFLSRPPSLLARAIVP 144
Score = 23.5 bits (45), Expect(2) = 4e-021
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3 / -3
Query: 79 LEQTTKLIS*HHCA*LRDGGERGK 8
LEQTTKLIS H + L G+
Sbjct: 186 LEQTTKLISQGHSSNLLPAAVEGE 115
>gb|BE215918.2|BE215918 HV_CEb0008N12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0008N12f, mRNA sequence
Length = 517
Score = 162 bits (348), Expect(2) = 2e-046
Identities = 67/100 (67%), Positives = 80/100 (80%)
Frame = +2 / +3
Query: 98 SSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFG 277
SSN ++YQAIRCMSSSKLFVGGLSY TD+ SLRD F+ YG++I+AKII+DR++GRSRGFG
Sbjct: 177 SSNPTLYQAIRCMSSSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFG 356
Query: 278 FITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGFR 397
FITY I A+DGK L GRN+RV+ A ERT GFR
Sbjct: 357 FITYAAEEQASSAIMALDGKDLHGRNLRVSAATERTSGFR 476
Score = 112 bits (239), Expect(2) = 9e-031
Identities = 61/101 (60%), Positives = 64/101 (63%)
Frame = -1 / -1
Query: 399 LRKPPVLSLA*LTRMFRPSRVFPXXXXXXXXXXXXXXXVIKPKPLDLPDSRSRIILASIT 220
LRKP VLS+A LTR RP R FP VIKPKPLDLP SRS IILASI
Sbjct: 478 LRKPLVLSVAALTRRLRPCRSFPSKAMMADEACSSAA*VIKPKPLDLPVSRSTIILASII 299
Query: 219 CPYLANSSLRL*SSVP*ESPPTKSLDDDMHLIAW*TDIFEL 97
P +SLRL SSV ESPPTKS +DDMHLIA * FEL
Sbjct: 298 SP*WEKASLRLPSSVVYESPPTKSFEDDMHLIA**RVGFEL 176
Score = 96.8 bits (205), Expect(2) = 4e-021
Identities = 45/93 (48%), Positives = 58/93 (62%)
Frame = -3 / -3
Query: 382 PLVSMINPYVPSIQSLSIHGSDGXXXXXXXRVSYKAKTSGPPRLTIKDNLSFNNLSIFGK 203
PL NP V S+ LSI G DG +SYKAKTS P + + DNLS NN SI GK
Sbjct: 461 PLSGSTNP*VASM*ILSIQGHDGR*SLFFCCISYKAKTSRPSSVAVYDNLSINNFSIMGK 282
Query: 202 LVSETVIIGSIRKPSNKKLG**HASDCLVDRHI 104
+S+T ++ IRKPSN++L *HAS CL++ +
Sbjct: 281 GISQTALVCGIRKPSNEELRG*HASYCLIESRV 183
Score = 43.2 bits (88), Expect(2) = 2e-046
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2 / +3
Query: 23 SVSQLGTMMLANKLGGLLKNATSS 94
S Q+GTM LANKLGGLLK ATSS
Sbjct: 111 SRQQIGTMALANKLGGLLKKATSS 182
Score = 40.5 bits (82), Expect(2) = 9e-031
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1 / -1
Query: 96 FELVAFLSKPPSLLASIIVP 37
FELVAFLS+PPSLLA IVP
Sbjct: 184 FELVAFLSRPPSLLARAIVP 125
Score = 23.5 bits (45), Expect(2) = 4e-021
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3 / -3
Query: 79 LEQTTKLIS*HHCA*LRDGGERGK 8
LEQTTKLIS H + L G+
Sbjct: 167 LEQTTKLISQGHSSNLLPAAVEGE 96
>gb|BQ459489.1|BQ459489 HA08P01r HA Hordeum vulgare subsp. vulgare cDNA clone HA08P01
5-PRIME, mRNA sequence
Length = 513
Score = 162 bits (348), Expect(2) = 2e-046
Identities = 67/100 (67%), Positives = 80/100 (80%)
Frame = +2 / +2
Query: 98 SSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFG 277
SSN ++YQAIRCMSSSKLFVGGLSY TD+ SLRD F+ YG++I+AKII+DR++GRSRGFG
Sbjct: 188 SSNPTLYQAIRCMSSSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFG 367
Query: 278 FITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGFR 397
FITY I A+DGK L GRN+RV+ A ERT GFR
Sbjct: 368 FITYAAEEQASSAIMALDGKDLHGRNLRVSAATERTSGFR 487
Score = 112 bits (239), Expect(2) = 9e-031
Identities = 61/101 (60%), Positives = 64/101 (63%)
Frame = -1 / -1
Query: 399 LRKPPVLSLA*LTRMFRPSRVFPXXXXXXXXXXXXXXXVIKPKPLDLPDSRSRIILASIT 220
LRKP VLS+A LTR RP R FP VIKPKPLDLP SRS IILASI
Sbjct: 489 LRKPLVLSVAALTRRLRPCRSFPSKAMMADEACSSAA*VIKPKPLDLPVSRSTIILASII 310
Query: 219 CPYLANSSLRL*SSVP*ESPPTKSLDDDMHLIAW*TDIFEL 97
P +SLRL SSV ESPPTKS +DDMHLIA * FEL
Sbjct: 309 SP*WEKASLRLPSSVVYESPPTKSFEDDMHLIA**RVGFEL 187
Score = 96.8 bits (205), Expect(2) = 4e-021
Identities = 45/93 (48%), Positives = 58/93 (62%)
Frame = -3 / -3
Query: 382 PLVSMINPYVPSIQSLSIHGSDGXXXXXXXRVSYKAKTSGPPRLTIKDNLSFNNLSIFGK 203
PL NP V S+ LSI G DG +SYKAKTS P + + DNLS NN SI GK
Sbjct: 472 PLSGSTNP*VASM*ILSIQGHDGR*SLFFCCISYKAKTSRPSSVAVYDNLSINNFSIMGK 293
Query: 202 LVSETVIIGSIRKPSNKKLG**HASDCLVDRHI 104
+S+T ++ IRKPSN++L *HAS CL++ +
Sbjct: 292 GISQTALVCGIRKPSNEELRG*HASYCLIESRV 194
Score = 43.2 bits (88), Expect(2) = 2e-046
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2 / +2
Query: 23 SVSQLGTMMLANKLGGLLKNATSS 94
S Q+GTM LANKLGGLLK ATSS
Sbjct: 122 SRQQIGTMALANKLGGLLKKATSS 193
Score = 40.5 bits (82), Expect(2) = 9e-031
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1 / -1
Query: 96 FELVAFLSKPPSLLASIIVP 37
FELVAFLS+PPSLLA IVP
Sbjct: 195 FELVAFLSRPPSLLARAIVP 136
Score = 23.5 bits (45), Expect(2) = 4e-021
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3 / -3
Query: 79 LEQTTKLIS*HHCA*LRDGGERGK 8
LEQTTKLIS H + L G+
Sbjct: 178 LEQTTKLISQGHSSNLLPAAVEGE 107
>gb|BJ464811.1|BJ464811 BJ464811 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36c02 5', mRNA sequence
Length = 587
Score = 160 bits (343), Expect(2) = 1e-045
Identities = 66/99 (66%), Positives = 79/99 (79%)
Frame = +2 / +2
Query: 98 SSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFG 277
SSN ++YQAIRCMSSSKLFVGGLSY TD+ SLRD F+ YG++I+AKII+DR++GRSRGFG
Sbjct: 200 SSNPTLYQAIRCMSSSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFG 379
Query: 278 FITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGF 394
FITY I A+DGK L GRN+RV+ A ERT GF
Sbjct: 380 FITYAAEEQASSAIMALDGKDLHGRNLRVSAATERTSGF 496
Score = 108 bits (230), Expect(2) = 2e-029
Identities = 59/99 (59%), Positives = 62/99 (62%)
Frame = -1 / -3
Query: 393 KPPVLSLA*LTRMFRPSRVFPXXXXXXXXXXXXXXXVIKPKPLDLPDSRSRIILASITCP 214
KP VLS+A LTR RP R FP VIKPKPLDLP SRS IILASI P
Sbjct: 495 KPLVLSVAALTRRLRPCRSFPSKAMMADEACSSAA*VIKPKPLDLPVSRSTIILASIISP 316
Query: 213 YLANSSLRL*SSVP*ESPPTKSLDDDMHLIAW*TDIFEL 97
+SLRL SSV ESPPTKS +DDMHLIA * FEL
Sbjct: 315 *WEKASLRLPSSVVYESPPTKSFEDDMHLIA**RVGFEL 199
Score = 43.2 bits (88), Expect(2) = 1e-045
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2 / +2
Query: 23 SVSQLGTMMLANKLGGLLKNATSS 94
S Q+GTM LANKLGGLLK ATSS
Sbjct: 134 SRQQIGTMALANKLGGLLKKATSS 205
Score = 40.5 bits (82), Expect(2) = 2e-029
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1 / -3
Query: 96 FELVAFLSKPPSLLASIIVP 37
FELVAFLS+PPSLLA IVP
Sbjct: 207 FELVAFLSRPPSLLARAIVP 148
>gb|BU995403.1|BU995403 HM10C12r HM Hordeum vulgare subsp. vulgare cDNA clone HM10C12
5-PRIME, mRNA sequence
Length = 478
Score = 165 bits (355), Expect = 2e-040
Identities = 70/110 (63%), Positives = 84/110 (76%)
Frame = +2 / +3
Query: 68 GLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILD 247
G L + S SSN ++YQAIRCMSSSKLFVGGLSY TD+ SLRD F+ YG++I+AKII+D
Sbjct: 9 GSLVVCSESPSSNPTLYQAIRCMSSSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVD 188
Query: 248 RESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGFR 397
R++GRSRGFGFITY I A+DGK L GRN+RV+ A ERT GFR
Sbjct: 189 RDTGRSRGFGFITYAAEEQASSAIMALDGKDLHGRNLRVSAATERTSGFR 338
Score = 112 bits (239), Expect = 2e-024
Identities = 61/101 (60%), Positives = 64/101 (63%)
Frame = -1 / -1
Query: 399 LRKPPVLSLA*LTRMFRPSRVFPXXXXXXXXXXXXXXXVIKPKPLDLPDSRSRIILASIT 220
LRKP VLS+A LTR RP R FP VIKPKPLDLP SRS IILASI
Sbjct: 340 LRKPLVLSVAALTRRLRPCRSFPSKAMMADEACSSAA*VIKPKPLDLPVSRSTIILASII 161
Query: 219 CPYLANSSLRL*SSVP*ESPPTKSLDDDMHLIAW*TDIFEL 97
P +SLRL SSV ESPPTKS +DDMHLIA * FEL
Sbjct: 160 SP*WEKASLRLPSSVVYESPPTKSFEDDMHLIA**RVGFEL 38
>gb|BQ762699.1|BQ762699 EBro02_SQ004_E20_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ004_E20 5', mRNA sequence
Length = 546
Score = 145 bits (312), Expect = 2e-034
Identities = 59/97 (60%), Positives = 74/97 (76%)
Frame = +2 / +2
Query: 92 SKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRG 271
S S ++ QA+R MSSSK+FVGG+SYGTDD SL D F+ YGQV EAK+I+DRESGRSRG
Sbjct: 197 SAGSGSAMLQAVRSMSSSKVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRESGRSRG 376
Query: 272 FGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
FGF+T+T IT MDGK L GR +RV++A++R
Sbjct: 377 FGFVTFTSSEEAGAAITGMDGKDLQGRIVRVSYAHDR 487
>gb|BU999319.1|BU999319 HI14C10r HI Hordeum vulgare subsp. vulgare cDNA clone HI14C10
5-PRIME, mRNA sequence
Length = 616
Score = 145 bits (312), Expect = 2e-034
Identities = 59/97 (60%), Positives = 74/97 (76%)
Frame = +2 / +1
Query: 92 SKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRG 271
S S ++ QA+R MSSSK+FVGG+SYGTDD SL D F+ YGQV EAK+I+DRESGRSRG
Sbjct: 199 SAGSGSAMLQAVRSMSSSKVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRESGRSRG 378
Query: 272 FGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
FGF+T+T IT MDGK L GR +RV++A++R
Sbjct: 379 FGFVTFTSSEEAGAAITGMDGKDLQGRIVRVSYAHDR 489
>gb|BU999391.1|BU999391 HI14F24r HI Hordeum vulgare subsp. vulgare cDNA clone HI14F24
5-PRIME, mRNA sequence
Length = 501
Score = 145 bits (312), Expect = 2e-034
Identities = 59/97 (60%), Positives = 74/97 (76%)
Frame = +2 / +2
Query: 92 SKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRG 271
S S ++ QA+R MSSSK+FVGG+SYGTDD SL D F+ YGQV EAK+I+DRESGRSRG
Sbjct: 203 SAGSGSAMLQAVRSMSSSKVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRESGRSRG 382
Query: 272 FGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
FGF+T+T IT MDGK L GR +RV++A++R
Sbjct: 383 FGFVTFTSSEEAGAAITGMDGKDLQGRIVRVSYAHDR 493
>gb|BF628294.2|BF628294 HVSMEb0003K10f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0003K10f, mRNA sequence
Length = 510
Score = 142 bits (305), Expect = 2e-033
Identities = 59/97 (60%), Positives = 73/97 (75%)
Frame = +2 / +1
Query: 92 SKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRG 271
S S ++ QA+R MSSSK+FVGG+SYGTDD SL D F+ YGQV EAK+I+DRESGRSRG
Sbjct: 181 SAGSGSAMLQAVRSMSSSKVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRESGRSRG 360
Query: 272 FGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
FGF T+T IT MDGK L GR +RV++A++R
Sbjct: 361 FGFETFTSSEEAGAAITGMDGKDLXGRIVRVSYAHDR 471
>gb|BQ764762.1|BQ764762 EBca01_SQ004_G20_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_G20 5', mRNA sequence
Length = 477
Score = 141 bits (303), Expect = 3e-033
Identities = 58/96 (60%), Positives = 72/96 (75%)
Frame = +2 / +2
Query: 92 SKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRG 271
S S ++ QA+R MSSSK+FVGG+SYGTDD SL D F+ YGQV EAK+I+DRESGRSRG
Sbjct: 188 SAGSGSAMLQAVRSMSSSKVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRESGRSRG 367
Query: 272 FGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANE 379
FGF T+T IT MDGK L GR +RV++A++
Sbjct: 368 FGFXTFTSSEEAGAAITGMDGKDLQGRIVRVSYAHD 475
>gb|BE559056.1|BE559056 HV_CEb0022I18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022I18f, mRNA sequence
Length = 700
Score = 135 bits (290), Expect = 2e-031
Identities = 56/91 (61%), Positives = 67/91 (73%)
Frame = +2 / +2
Query: 92 SKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRG 271
S S ++ QA+R MSSSK+FVGG+SYGTDD SL D F+ YGQV EAK+I+DRESGRSRG
Sbjct: 221 SAGSGSAMLQAVRSMSSSKVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRESGRSRG 400
Query: 272 FGFITYTXXXXXXXXITAMDGKTLDGRNIRV 364
FGF+T+T T MDGK L GR +RV
Sbjct: 401 FGFVTFTSSEEAGAAHTGMDGKDLQGRIVRV 493
>gb|BF262024.2|BF262024 HV_CEa0002N17f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0002N17f, mRNA sequence
Length = 817
Score = 126 bits (269), Expect = 1e-028
Identities = 52/97 (53%), Positives = 67/97 (69%)
Frame = +2 / +3
Query: 101 SNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGF 280
S + V A SSSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF
Sbjct: 141 STLPVSCAPPVWSSSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGF 320
Query: 281 ITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGG 391
+++ MDG+ L GRN+RVN ANER G
Sbjct: 321 VSFASEEDAGNAAKGMDGQELGGRNVRVNFANERPSG 431
>gb|BI958703.1|BI958703 HVSMEn0016E15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016E15f, mRNA sequence
Length = 659
Score = 125 bits (268), Expect = 2e-028
Identities = 49/79 (62%), Positives = 62/79 (78%)
Frame = +2 / +3
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
++FVGG+SYGTDD SL D F+ YGQV EAK+I+DRESGRSRGFGF+T+T IT
Sbjct: 21 QVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRESGRSRGFGFVTFTSSEEAGAAITG 200
Query: 326 MDGKTLDGRNIRVNHANER 382
MDGK L GR +RV++A++R
Sbjct: 201 MDGKDLQGRIVRVSYAHDR 257
>gb|BG368461.1|BG368461 HVSMEi0019B01f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0019B01f, mRNA sequence
Length = 622
Score = 124 bits (265), Expect = 5e-028
Identities = 48/84 (57%), Positives = 63/84 (75%)
Frame = +2 / +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 191 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 370
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
+MDG+ L GRN+RVN ANER G
Sbjct: 371 KSMDGQELXGRNVRVNFANERPSG 442
>gb|BE411073.1|BE411073 ISC002.A11F990322 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC002.A11, mRNA sequence
Length = 428
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 146 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 325
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 326 KGMDGQELGGRNVRVNFANERPSG 397
>gb|AL505139.1|AL505139 AL505139 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I09V 5', mRNA sequence
Length = 562
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 167 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 346
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 347 KGMDGQELGGRNVRVNFANERPSG 418
>gb|AL509144.1|AL509144 AL509144 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10N11V 5',
mRNA sequence
Length = 569
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 164 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 343
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 344 KGMDGQELGGRNVRVNFANERPSG 415
>gb|BG301140.1|BG301140 HVSMEb0019L03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019L03f, mRNA sequence
Length = 590
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +1
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 178 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 357
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 358 KGMDGQELGGRNVRVNFANERPSG 429
>gb|BG343608.1|BG343608 HVSMEg0006A07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006A07f, mRNA sequence
Length = 993
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +3
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 174 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 353
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 354 KGMDGQELGGRNVRVNFANERPSG 425
>gb|BE231114.2|BE231114 HVSMEg0016N01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0016N01f, mRNA sequence
Length = 961
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +3
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 174 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 353
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 354 KGMDGQELGGRNVRVNFANERPSG 425
>gb|BJ453522.1|BJ453522 BJ453522 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak43g11 5', mRNA sequence
Length = 690
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 176 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 355
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 356 KGMDGQELGGRNVRVNFANERPSG 427
>gb|BJ461068.1|BJ461068 BJ461068 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak43g11 3', mRNA sequence
Length = 609
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / -1
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 609 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 430
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 429 KGMDGQELGGRNVRVNFANERPSG 358
>gb|BQ469633.1|BQ469633 HZ01G11r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01G11
5-PRIME, mRNA sequence
Length = 388
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 134 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 313
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 314 KGMDGQELGGRNVRVNFANERPSG 385
>gb|BQ471702.1|BQ471702 HV03D11r HV Hordeum vulgare subsp. vulgare cDNA clone HV03D11
5-PRIME, mRNA sequence
Length = 514
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +3
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 177 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 356
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 357 KGMDGQELGGRNVRVNFANERPSG 428
>gb|BM377503.2|BM377503 EBem04_SQ003_F08_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_F08 5', mRNA sequence
Length = 509
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +1
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 172 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 351
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 352 KGMDGQELGGRNVRVNFANERPSG 423
>gb|BM376493.2|BM376493 EBem05_SQ002_G04_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_G04 5', mRNA sequence
Length = 461
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +3
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 174 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 353
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 354 KGMDGQELGGRNVRVNFANERPSG 425
>gb|BM375524.2|BM375524 EBem06_SQ003_J16_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_J16 5', mRNA sequence
Length = 458
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 179 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 358
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 359 KGMDGQELGGRNVRVNFANERPSG 430
>gb|BM098998.2|BM098998 EBpi05_SQ002_K14_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ002_K14 5', mRNA sequence
Length = 440
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +1
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 169 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 348
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 349 KGMDGQELGGRNVRVNFANERPSG 420
>gb|BM370309.2|BM370309 EBro08_SQ003_M20_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_M20 5', mRNA sequence
Length = 681
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +1
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 169 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 348
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 349 KGMDGQELGGRNVRVNFANERPSG 420
>gb|BM370561.2|BM370561 EBro08_SQ004_J15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_J15 5', mRNA sequence
Length = 631
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +1
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 172 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 351
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 352 KGMDGQELGGRNVRVNFANERPSG 423
>gb|BQ755111.1|BQ755111 EBed02_SQ003_M03_R endosperm, 8 DPA, no treatment, cv Optic, EBed02
Hordeum vulgare subsp. vulgare cDNA clone
EBed02_SQ003_M03 5', mRNA sequence
Length = 495
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +1
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 172 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 351
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 352 KGMDGQELGGRNVRVNFANERPSG 423
>gb|BQ762387.1|BQ762387 EBro01_SQ005_N15 _R root, 3 week, hydroponic grown, no treatment,
cv Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA
clone EBro01_SQ005_N15 5', mRNA sequence
Length = 569
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 173 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 352
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 353 KGMDGQELGGRNVRVNFANERPSG 424
>gb|BQ763259.1|BQ763259 EBro02_SQ007_P18_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_P18 5', mRNA sequence
Length = 526
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +1
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 169 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 348
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 349 KGMDGQELGGRNVRVNFANERPSG 420
>gb|BU976484.1|BU976484 HA03M13r HA Hordeum vulgare subsp. vulgare cDNA clone HA03M13
5-PRIME, mRNA sequence
Length = 532
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +1
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 187 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 366
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 367 KGMDGQELGGRNVRVNFANERPSG 438
>gb|BU976485.1|BU976485 HA03M13u HA Hordeum vulgare subsp. vulgare cDNA clone HA03M13
3-PRIME, mRNA sequence
Length = 606
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / -3
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 535 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 356
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 355 KGMDGQELGGRNVRVNFANERPSG 284
>gb|BU978152.1|BU978152 HA12K16r HA Hordeum vulgare subsp. vulgare cDNA clone HA12K16
5-PRIME, mRNA sequence
Length = 534
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +3
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 186 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 365
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 366 KGMDGQELGGRNVRVNFANERPSG 437
>gb|BU981088.1|BU981088 HA22J18r HA Hordeum vulgare subsp. vulgare cDNA clone HA22J18
5-PRIME, mRNA sequence
Length = 500
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 182 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 361
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 362 KGMDGQELGGRNVRVNFANERPSG 433
>gb|BU982679.1|BU982679 HA27E15r HA Hordeum vulgare subsp. vulgare cDNA clone HA27E15
5-PRIME, mRNA sequence
Length = 528
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +1
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 184 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 363
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 364 KGMDGQELGGRNVRVNFANERPSG 435
>gb|BU989672.1|BU989672 HF22G04r HF Hordeum vulgare subsp. vulgare cDNA clone HF22G04
5-PRIME, mRNA sequence
Length = 514
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 170 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 349
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 350 KGMDGQELGGRNVRVNFANERPSG 421
>gb|BU996297.1|BU996297 HM13C17r HM Hordeum vulgare subsp. vulgare cDNA clone HM13C17
5-PRIME, mRNA sequence
Length = 486
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +3
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 141 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 320
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 321 KGMDGQELGGRNVRVNFANERPSG 392
>gb|BU996923.1|BU996923 HI06E18r HI Hordeum vulgare subsp. vulgare cDNA clone HI06E18
5-PRIME, mRNA sequence
Length = 532
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +1
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 175 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 354
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 355 KGMDGQELGGRNVRVNFANERPSG 426
>gb|BU998475.1|BU998475 HI11C23r HI Hordeum vulgare subsp. vulgare cDNA clone HI11C23
5-PRIME, mRNA sequence
Length = 507
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +3
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 153 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 332
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 333 KGMDGQELGGRNVRVNFANERPSG 404
>gb|BU999425.1|BU999425 HI14H13r HI Hordeum vulgare subsp. vulgare cDNA clone HI14H13
5-PRIME, mRNA sequence
Length = 635
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +1
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 172 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 351
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 352 KGMDGQELGGRNVRVNFANERPSG 423
>gb|BU999809.1|BU999809 HI15O09r HI Hordeum vulgare subsp. vulgare cDNA clone HI15O09
5-PRIME, mRNA sequence
Length = 532
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +1
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 178 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 357
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 358 KGMDGQELGGRNVRVNFANERPSG 429
>gb|CA023990.1|CA023990 HZ48A20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48A20
5-PRIME, mRNA sequence
Length = 507
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 167 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 346
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 347 KGMDGQELGGRNVRVNFANERPSG 418
>gb|CA032937.1|CA032937 HX14K06r HX Hordeum vulgare subsp. vulgare cDNA clone HX14K06
5-PRIME, mRNA sequence
Length = 445
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / +3
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 165 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 344
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 345 KGMDGQELXGRNVRVNFANERPSG 416
>gb|CB858507.1|CB858507 HI07E19w HI Hordeum vulgare subsp. vulgare cDNA clone HI07E19
3-PRIME, mRNA sequence
Length = 648
Score = 123 bits (264), Expect = 7e-028
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = +2 / -3
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 559 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 380
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 379 KGMDGQELGGRNVRVNFANERPSG 308
>gb|BI780514.2|BI780514 EBem08_SQ001_K14_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ001_K14 5', mRNA sequence
Length = 452
Score = 122 bits (262), Expect = 1e-027
Identities = 48/84 (57%), Positives = 61/84 (72%)
Frame = +2 / +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRSRGFGF+++
Sbjct: 179 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSRGFGFVSFASEEDAGNAA 358
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG L GRN+RVN ANER G
Sbjct: 359 KGMDGXELGGRNVRVNFANERPSG 430
>gb|BF065586.1|BF065586 HV_CEb0012N15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012N15f, mRNA sequence
Length = 725
Score = 122 bits (261), Expect = 2e-027
Identities = 47/84 (55%), Positives = 62/84 (73%)
Frame = +2 / +1
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SSKLFVGGL++GTDDHSL++ F +G+V EA++I DRE+GRS+GFGF+++
Sbjct: 307 SSKLFVGGLAWGTDDHSLKEAFQSFGEVTEARVITDRETGRSKGFGFVSFASEEDAGNAA 486
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
MDG+ L GRN+RVN ANER G
Sbjct: 487 KGMDGQELGGRNVRVNFANERPSG 558
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 158,634,642
Number of Sequences: 312970
Number of extensions: 1940804
Number of successful extensions: 24068
Number of sequences better than 1.0e-020: 389
length of database: 58,378,179
effective HSP length: 50
effective length of database: 42,729,679
effective search space used: 5469398912
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)