TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441599.2.2
(767 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ659548.1|BQ659548 HE01M16u HE Hordeum vulgare subsp. v... 259 2e-068
gb|BG344088.2|BG344088 HVSMEg0007J23f Hordeum vulgare pre-a... 258 2e-068
gb|BE455966.3|BE455966 HVSMEg0019B01f Hordeum vulgare pre-a... 258 2e-068
gb|AV916291.1|AV916291 AV916291 K. Sato unpublished cDNA li... 258 2e-068
gb|AV916977.1|AV916977 AV916977 K. Sato unpublished cDNA li... 258 2e-068
gb|AV923559.1|AV923559 AV923559 K. Sato unpublished cDNA li... 258 2e-068
gb|AV931655.1|AV931655 AV931655 K. Sato unpublished cDNA li... 258 2e-068
gb|BQ460900.1|BQ460900 HE01M16r HE Hordeum vulgare subsp. v... 258 2e-068
gb|BQ466625.1|BQ466625 HS01B09T HS Hordeum vulgare subsp. v... 258 2e-068
gb|BQ469765.1|BQ469765 HZ01M24r HZ Hordeum vulgare subsp. v... 258 2e-068
gb|BM440853.2|BM440853 EBca01_SQ001_G18_R carpel, pre-anthe... 258 2e-068
gb|BM368188.2|BM368188 EBed01_SQ002_G17_R endosperm, 6 DPA,... 258 2e-068
gb|BM097606.2|BM097606 EBem04_SQ002_C24_R embryo, 12 DPA, n... 258 2e-068
gb|BM377927.2|BM377927 EBem04_SQ004_J22_R embryo, 12 DPA, n... 258 2e-068
gb|BQ763856.1|BQ763856 EBro03_SQ005_H17_R root, 3 week, wat... 258 2e-068
gb|BU976730.1|BU976730 HA10D07r HA Hordeum vulgare subsp. v... 258 2e-068
gb|BU977881.1|BU977881 HA12D08r HA Hordeum vulgare subsp. v... 258 2e-068
gb|BU978542.1|BU978542 HA13I17r HA Hordeum vulgare subsp. v... 258 2e-068
gb|BU983417.1|BU983417 HA29K18r HA Hordeum vulgare subsp. v... 258 2e-068
gb|BU984022.1|BU984022 HA31M02r HA Hordeum vulgare subsp. v... 258 2e-068
gb|BU997399.1|BU997399 HI07N23r HI Hordeum vulgare subsp. v... 258 2e-068
gb|BU998875.1|BU998875 HI12G19r HI Hordeum vulgare subsp. v... 258 2e-068
gb|BU999832.1|BU999832 HI15P15r HI Hordeum vulgare subsp. v... 258 2e-068
gb|CA013173.1|CA013173 HT07J22r HT Hordeum vulgare subsp. v... 258 2e-068
gb|CA013628.1|CA013628 HT09A18r HT Hordeum vulgare subsp. v... 258 2e-068
gb|CA021210.1|CA021210 HZ39H02r HZ Hordeum vulgare subsp. v... 258 2e-068
gb|CA024625.1|CA024625 HZ49N10r HZ Hordeum vulgare subsp. v... 258 2e-068
gb|CA025039.1|CA025039 HZ51A19r HZ Hordeum vulgare subsp. v... 258 2e-068
gb|CA025246.1|CA025246 HZ51J13r HZ Hordeum vulgare subsp. v... 258 2e-068
gb|CA029397.1|CA029397 HZ65B13r HZ Hordeum vulgare subsp. v... 258 2e-068
gb|BJ549122.1|BJ549122 BJ549122 K. Sato unpublished cDNA li... 258 2e-068
gb|CB860038.1|CB860038 HI12G19w HI Hordeum vulgare subsp. v... 258 2e-068
gb|CV056266.1|CV056266 BNEL15G6 Barley EST endosperm librar... 258 2e-068
gb|CV056531.1|CV056531 BNEL18H1 Barley EST endosperm librar... 258 2e-068
gb|CV057063.1|CV057063 BNEL23f12 Barley EST endosperm libra... 258 2e-068
gb|CV058783.1|CV058783 BNEL40h1 Barley EST endosperm librar... 258 2e-068
gb|CV058787.1|CV058787 BNEL40h2 Barley EST endosperm librar... 258 2e-068
gb|CV060449.1|CV060449 BNEL58c2 Barley EST endosperm librar... 258 2e-068
gb|CV061757.1|CV061757 BNEL71f1 Barley EST endosperm librar... 258 2e-068
gb|CK122329.1|CK122329 BES1824102o02 BES1824 Hordeum vulgar... 258 2e-068
gb|CK123815.1|CK123815 BES1824105g24 BES1824 Hordeum vulgar... 258 2e-068
gb|BM371480.2|BM371480 EBma08_SQ002_O06_R maternal, 28 DPA,... 258 3e-068
gb|CA023173.1|CA023173 HZ45H05r HZ Hordeum vulgare subsp. v... 258 3e-068
gb|BF260888.3|BF260888 HVSMEf0023D08f Hordeum vulgare seedl... 255 2e-067
gb|BE193362.2|BE193362 HVSMEh0080L17f Hordeum vulgare 5-45 ... 253 1e-066
gb|BI779400.2|BI779400 EBro01_SQ003_O11_R root, 3 week, hyd... 250 8e-066
gb|BU978165.1|BU978165 HA12L01r HA Hordeum vulgare subsp. v... 248 2e-065
gb|CA027739.1|CA027739 HZ59O02r HZ Hordeum vulgare subsp. v... 248 2e-065
gb|CK123436.1|CK123436 BES1824104a20 BES1824 Hordeum vulgar... 248 2e-065
gb|BF259294.3|BF259294 HVSMEf0018M24f Hordeum vulgare seedl... 240 6e-064
gb|AV921719.1|AV921719 AV921719 K. Sato unpublished cDNA li... 243 1e-063
gb|BU979983.1|BU979983 HA18C03r HA Hordeum vulgare subsp. v... 242 2e-063
gb|CA002011.1|CA002011 HS06E03r HS Hordeum vulgare subsp. v... 242 2e-063
gb|CA028012.1|CA028012 HZ60L17r HZ Hordeum vulgare subsp. v... 242 2e-063
gb|BM101388.2|BM101388 EBpi01_SQ003_L07_R pistil, 1 DPA, no... 211 4e-062
gb|CV063968.1|CV063968 BNEL95g10 Barley EST endosperm libra... 235 3e-061
gb|CV054163.1|CV054163 BNEL107e1 Barley EST endosperm libra... 210 2e-060
gb|BQ764523.1|BQ764523 EBca01_SQ004_J03_R carpel, pre-anthe... 210 2e-060
gb|BQ459836.1|BQ459836 HA07P07r HA Hordeum vulgare subsp. v... 210 2e-060
gb|BM375264.2|BM375264 EBem06_SQ002_N07_R embryo, 21 DPA, n... 210 2e-060
gb|BM374879.1|BM374879 EBma05_SQ003_F16_R maternal, 12 DPA,... 210 2e-060
gb|CV058390.1|CV058390 BNEL37e5 Barley EST endosperm librar... 210 2e-060
gb|BU981519.1|BU981519 HA23N24r HA Hordeum vulgare subsp. v... 210 2e-060
gb|CA028650.1|CA028650 HZ62M12r HZ Hordeum vulgare subsp. v... 210 2e-060
gb|CV058513.1|CV058513 BNEL38h1 Barley EST endosperm librar... 208 1e-059
gb|BI949421.1|BI949421 HVSMEl0013M24f Hordeum vulgare spike... 206 3e-059
gb|BU997105.1|BU997105 HI06O20r HI Hordeum vulgare subsp. v... 210 7e-059
gb|BJ448314.1|BJ448314 BJ448314 K. Sato unpublished cDNA li... 198 8e-057
gb|CA019079.1|CA019079 HV10K24r HV Hordeum vulgare subsp. v... 210 1e-056
gb|CA026289.1|CA026289 HZ55H16r HZ Hordeum vulgare subsp. v... 210 1e-056
gb|AV918231.1|AV918231 AV918231 K. Sato unpublished cDNA li... 191 2e-054
gb|BQ460597.1|BQ460597 HA06H20r HA Hordeum vulgare subsp. v... 210 6e-054
gb|CV057323.1|CV057323 BNEL26e3 Barley EST endosperm librar... 210 1e-053
gb|CA025687.1|CA025687 HZ52N19r HZ Hordeum vulgare subsp. v... 209 1e-053
gb|CV064027.1|CV064027 BNEL96e7 Barley EST endosperm librar... 192 3e-053
gb|BM444459.1|BM444459 EBem09_SQ005_E24_R embryo, 1 Day ger... 200 6e-051
gb|BJ456033.1|BJ456033 BJ456033 K. Sato unpublished cDNA li... 162 1e-050
gb|BM100140.2|BM100140 EBma01_SQ001_F01_R maternal, 4 DPA, ... 199 2e-050
gb|BM371270.2|BM371270 EBma08_SQ002_B09_R maternal, 28 DPA,... 192 3e-048
gb|BU969591.1|BU969591 HB11P12r BC Hordeum vulgare subsp. v... 186 1e-046
gb|CB858662.1|CB858662 HI07N23w HI Hordeum vulgare subsp. v... 171 2e-042
gb|BI776491.2|BI776491 EBpi05_SQ001_J07_R pistil, 8 DPA, no... 171 6e-042
gb|BQ665994.1|BQ665994 HZ01M24u HZ Hordeum vulgare subsp. v... 162 2e-039
gb|BQ757874.1|BQ757874 EBem10_SQ005_H23_R embryo, 2 Day ger... 159 2e-038
gb|CK124996.1|CK124996 BES1824111A2g09 BES1824 Hordeum vulg... 155 4e-037
gb|BU976731.1|BU976731 HA10D07u HA Hordeum vulgare subsp. v... 154 7e-037
gb|AV928006.1|AV928006 AV928006 K. Sato unpublished cDNA li... 149 2e-035
gb|BJ550017.1|BJ550017 BJ550017 K. Sato unpublished cDNA li... 149 2e-035
gb|BQ757103.1|BQ757103 EBem10_SQ002_N07_R embryo, 2 Day ger... 147 8e-035
gb|BM098020.2|BM098020 EBpi03_SQ002_F05_R pistil, 4 DPA, no... 99 1e-034
gb|BU979618.1|BU979618 HA16L17r HA Hordeum vulgare subsp. v... 122 6e-034
gb|BU980637.1|BU980637 HA21D21r HA Hordeum vulgare subsp. v... 133 2e-030
gb|BU978936.1|BU978936 HA14L04r HA Hordeum vulgare subsp. v... 109 4e-030
gb|BI777987.2|BI777987 EBro07_SQ001_L02_R root, 3 week, red... 99 6e-030
gb|AJ433556.1|AJ433556 AJ433556 S00002 Hordeum vulgare subs... 129 2e-029
gb|BM370590.2|BM370590 EBro08_SQ004_K21_R root, 3 week, dro... 106 2e-029
gb|BQ657538.1|BQ657538 HA07P07u HA Hordeum vulgare subsp. v... 100 3e-027
gb|BQ657907.1|BQ657907 HA06H20u HA Hordeum vulgare subsp. v... 100 3e-027
gb|AL501438.1|AL501438 AL501438 Hordeum vulgare Barke roots... 99 4e-027
gb|BI780839.1|BI780839 EBma05_SQ001_B24_R maternal, 12 DPA,... 120 8e-027
gb|CV056147.1|CV056147 BNEL14E12 Barley EST endosperm libra... 97 2e-026
gb|BQ466949.1|BQ466949 HS02B09r HS Hordeum vulgare subsp. v... 118 3e-026
gb|CA010975.1|CA010975 HT07J22u HT Hordeum vulgare subsp. v... 66 7e-025
gb|CA032476.1|CA032476 HX13C16r HX Hordeum vulgare subsp. v... 91 1e-024
gb|CA016055.1|CA016055 HV10K24u HV Hordeum vulgare subsp. v... 82 5e-022
>gb|BQ659548.1|BQ659548 HE01M16u HE Hordeum vulgare subsp. vulgare cDNA clone HE01M16
3-PRIME, mRNA sequence
Length = 576
Score = 259 bits (559), Expect = 2e-068
Identities = 104/130 (80%), Positives = 118/130 (90%)
Frame = +1 / -2
Query: 112 EVMAMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLP 291
E AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLP
Sbjct: 539 EGKAMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLP 360
Query: 292 FQACEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDM 471
FQ C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDM
Sbjct: 359 FQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDM 180
Query: 472 FRLNYG*KTA 501
FRLNYG* A
Sbjct: 179 FRLNYG*GRA 150
Score = 217 bits (469), Expect = 5e-056
Identities = 97/131 (74%), Positives = 101/131 (77%)
Frame = -1 / +1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PET T PPWGP+GWQS
Sbjct: 148 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETNTRTPPWGPEGWQS 327
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 328 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 507
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 508 DTESGSIAFPS 540
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / -1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 507 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 328
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 327 RLPALGAPG 301
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / +2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 365 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 478
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / -1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 252 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 157
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / +2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 161 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 253
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / +3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 300 ALGPRGLAVDGIDLVLALLEGERS 371
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / +3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 93 SIFIVST*IPDQVLCCQ 143
>gb|BG344088.2|BG344088 HVSMEg0007J23f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007J23f, mRNA sequence
Length = 754
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 93 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 272
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 273 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 452
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 453 NYG*GRA 473
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 475 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 296
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 295 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 116
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 115 DTESGSIASPS 83
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 116 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 295
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 296 RLPALGAPG 322
Score = 69.8 bits (146), Expect(4) = 3e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 258 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 145
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 371 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 466
Score = 46.9 bits (96), Expect(4) = 3e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 462 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 370
Score = 41.8 bits (85), Expect(4) = 3e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 323 ALGPRGLAVDGIDLVLALLEGERS 252
Score = 21.7 bits (41), Expect(4) = 3e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 530 SIFIVST*IPDQVLCCQ 480
>gb|BE455966.3|BE455966 HVSMEg0019B01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019B01f, mRNA sequence
Length = 595
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 36 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 215
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 216 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 395
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 396 NYG*GRA 416
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 418 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLXGCSPGPVVMVPETKTRTPPWGPEGWQS 239
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 238 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 59
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 58 DTESGSIASPS 26
Score = 109 bits (233), Expect(2) = 8e-034
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 59 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 238
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 239 RLPALGAPG 265
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 201 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 88
Score = 54.2 bits (112), Expect(2) = 8e-034
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 314 APXQVLTDVPFAASWRELLRAE*HVPPELWLR 409
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 405 NHSSGGTCHSARRSSLQLAANGTSVRT*XGA 313
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 266 ALGPRGLAVDGIDLVLALLEGERS 195
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 473 SIFIVST*IPDQVLCCQ 423
>gb|AV916291.1|AV916291 AV916291 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12h19 5', mRNA sequence
Length = 561
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 45 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 224
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 225 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 404
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 405 NYG*GRA 425
Score = 218 bits (471), Expect = 3e-056
Identities = 97/128 (75%), Positives = 101/128 (78%)
Frame = -1 / -3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 427 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 248
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 247 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 68
Query: 143 ATASGSIA 120
T SGSIA
Sbjct: 67 DTESGSIA 44
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 68 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 247
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 248 RLPALGAPG 274
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 210 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 97
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 323 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 418
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 414 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 322
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 275 ALGPRGLAVDGIDLVLALLEGERS 204
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 482 SIFIVST*IPDQVLCCQ 432
>gb|AV916977.1|AV916977 AV916977 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20f06 5', mRNA sequence
Length = 559
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 99 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 278
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 279 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 458
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 459 NYG*GRA 479
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 481 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 302
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 301 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 122
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 121 DTESGSIASPS 89
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 122 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 301
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 302 RLPALGAPG 328
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 264 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 151
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 377 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 472
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 468 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 376
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 329 ALGPRGLAVDGIDLVLALLEGERS 258
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 536 SIFIVST*IPDQVLCCQ 486
>gb|AV923559.1|AV923559 AV923559 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13j07 5', mRNA sequence
Length = 628
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 85 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 264
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 265 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 444
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 445 NYG*GRA 465
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 467 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 288
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 287 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 108
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 107 DTESGSIASPS 75
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 108 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 287
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 288 RLPALGAPG 314
Score = 69.8 bits (146), Expect(4) = 2e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 250 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 137
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 363 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 458
Score = 46.9 bits (96), Expect(4) = 2e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 454 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 362
Score = 41.8 bits (85), Expect(4) = 2e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 315 ALGPRGLAVDGIDLVLALLEGERS 244
Score = 21.7 bits (41), Expect(4) = 2e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 522 SIFIVST*IPDQVLCCQ 472
>gb|AV931655.1|AV931655 AV931655 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23k17 3', mRNA sequence
Length = 529
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / -2
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 480 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 301
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 300 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 121
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 120 NYG*GRA 100
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / +2
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 98 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 277
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 278 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 457
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 458 DTESGSIASPS 490
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / -1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 457 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 278
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 277 RLPALGAPG 251
Score = 69.8 bits (146), Expect(3) = 6e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / +3
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 315 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 428
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / -1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 202 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 107
Score = 46.9 bits (96), Expect(3) = 6e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / +3
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 111 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 203
Score = 41.8 bits (85), Expect(3) = 6e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / +1
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 250 ALGPRGLAVDGIDLVLALLEGERS 321
>gb|BQ460900.1|BQ460900 HE01M16r HE Hordeum vulgare subsp. vulgare cDNA clone HE01M16
5-PRIME, mRNA sequence
Length = 509
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +2
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 47 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 226
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 227 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 406
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 407 NYG*GRA 427
Score = 218 bits (471), Expect = 3e-056
Identities = 97/128 (75%), Positives = 101/128 (78%)
Frame = -1 / -3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 429 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 250
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 249 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 70
Query: 143 ATASGSIA 120
T SGSIA
Sbjct: 69 DTESGSIA 46
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 70 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 249
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 250 RLPALGAPG 276
Score = 69.8 bits (146), Expect(4) = 9e-028
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 212 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 99
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 325 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 420
Score = 46.9 bits (96), Expect(4) = 9e-028
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 416 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 324
Score = 41.8 bits (85), Expect(4) = 9e-028
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 277 ALGPRGLAVDGIDLVLALLEGERS 206
Score = 21.7 bits (41), Expect(4) = 9e-028
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 484 SIFIVST*IPDQVLCCQ 434
>gb|BQ466625.1|BQ466625 HS01B09T HS Hordeum vulgare subsp. vulgare cDNA clone HS01B09
5-PRIME, mRNA sequence
Length = 572
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +2
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 101 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 280
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 281 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 460
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 461 NYG*GRA 481
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 483 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 304
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 303 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 124
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 123 DTESGSIASPS 91
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 124 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 303
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 304 RLPALGAPG 330
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 266 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 153
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 379 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 474
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 470 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 378
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 331 ALGPRGLAVDGIDLVLALLEGERS 260
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 538 SIFIVST*IPDQVLCCQ 488
>gb|BQ469765.1|BQ469765 HZ01M24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01M24
5-PRIME, mRNA sequence
Length = 537
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 75 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 254
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 255 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 434
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 435 NYG*GRA 455
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 457 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 278
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 277 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 98
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 97 DTESGSIASPS 65
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 98 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 277
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 278 RLPALGAPG 304
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 240 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 127
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 353 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 448
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 444 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 352
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 305 ALGPRGLAVDGIDLVLALLEGERS 234
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 512 SIFIVST*IPDQVLCCQ 462
>gb|BM440853.2|BM440853 EBca01_SQ001_G18_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ001_G18 5', mRNA sequence
Length = 478
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 61 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 240
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 241 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 420
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 421 NYG*GRA 441
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 443 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 264
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 263 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 84
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 83 DTESGSIASPS 51
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 84 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 263
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 264 RLPALGAPG 290
Score = 69.8 bits (146), Expect(3) = 6e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 226 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 113
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 339 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 434
Score = 46.9 bits (96), Expect(3) = 6e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 430 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 338
Score = 41.8 bits (85), Expect(3) = 6e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 291 ALGPRGLAVDGIDLVLALLEGERS 220
>gb|BM368188.2|BM368188 EBed01_SQ002_G17_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_G17 5', mRNA sequence
Length = 647
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +2
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 65 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 244
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 245 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 424
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 425 NYG*GRA 445
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 447 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 268
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 267 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 88
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 87 DTESGSIASPS 55
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 88 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 267
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 268 RLPALGAPG 294
Score = 69.8 bits (146), Expect(4) = 2e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 230 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 117
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 343 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 438
Score = 46.9 bits (96), Expect(4) = 2e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 434 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 342
Score = 41.8 bits (85), Expect(4) = 2e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 295 ALGPRGLAVDGIDLVLALLEGERS 224
Score = 21.7 bits (41), Expect(4) = 2e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 502 SIFIVST*IPDQVLCCQ 452
>gb|BM097606.2|BM097606 EBem04_SQ002_C24_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_C24 5', mRNA sequence
Length = 560
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 93 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 272
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 273 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 452
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 453 NYG*GRA 473
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -2
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 475 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 296
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 295 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 116
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 115 DTESGSIASPS 83
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 116 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 295
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 296 RLPALGAPG 322
Score = 69.8 bits (146), Expect(3) = 5e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 258 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 145
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 371 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 466
Score = 46.9 bits (96), Expect(3) = 5e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -3
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 462 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 370
Score = 41.8 bits (85), Expect(3) = 5e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -1
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 323 ALGPRGLAVDGIDLVLALLEGERS 252
>gb|BM377927.2|BM377927 EBem04_SQ004_J22_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ004_J22 5', mRNA sequence
Length = 669
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 120 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 299
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 300 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 479
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 480 NYG*GRA 500
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 502 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 323
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 322 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 143
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 142 DTESGSIASPS 110
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 143 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 322
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 323 RLPALGAPG 349
Score = 69.8 bits (146), Expect(4) = 2e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 285 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 172
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 398 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 493
Score = 46.9 bits (96), Expect(4) = 2e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 489 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 397
Score = 41.8 bits (85), Expect(4) = 2e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 350 ALGPRGLAVDGIDLVLALLEGERS 279
Score = 21.7 bits (41), Expect(4) = 2e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 557 SIFIVST*IPDQVLCCQ 507
>gb|BQ763856.1|BQ763856 EBro03_SQ005_H17_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_H17 5', mRNA sequence
Length = 684
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +2
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 80 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 259
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 260 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 439
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 440 NYG*GRA 460
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 462 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 283
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 282 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 103
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 102 DTESGSIASPS 70
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 103 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 282
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 283 RLPALGAPG 309
Score = 69.8 bits (146), Expect(4) = 2e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 245 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 132
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 358 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 453
Score = 46.9 bits (96), Expect(4) = 2e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 449 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 357
Score = 41.8 bits (85), Expect(4) = 2e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 310 ALGPRGLAVDGIDLVLALLEGERS 239
Score = 21.7 bits (41), Expect(4) = 2e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 517 SIFIVST*IPDQVLCCQ 467
>gb|BU976730.1|BU976730 HA10D07r HA Hordeum vulgare subsp. vulgare cDNA clone HA10D07
5-PRIME, mRNA sequence
Length = 552
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 105 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 284
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 285 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 464
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 465 NYG*GRA 485
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 487 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 308
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 307 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 128
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 127 DTESGSIASPS 95
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 128 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 307
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 308 RLPALGAPG 334
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 270 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 157
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 383 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 478
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 474 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 382
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 335 ALGPRGLAVDGIDLVLALLEGERS 264
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 542 SIFIVST*IPDQVLCCQ 492
>gb|BU977881.1|BU977881 HA12D08r HA Hordeum vulgare subsp. vulgare cDNA clone HA12D08
5-PRIME, mRNA sequence
Length = 529
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 79 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 258
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 259 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 438
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 439 NYG*GRA 459
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 461 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 282
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 281 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 102
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 101 DTESGSIASPS 69
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 102 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 281
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 282 RLPALGAPG 308
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 244 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 131
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 357 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 452
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 448 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 356
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 309 ALGPRGLAVDGIDLVLALLEGERS 238
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 516 SIFIVST*IPDQVLCCQ 466
>gb|BU978542.1|BU978542 HA13I17r HA Hordeum vulgare subsp. vulgare cDNA clone HA13I17
5-PRIME, mRNA sequence
Length = 525
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 76 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 255
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 256 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 435
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 436 NYG*GRA 456
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -2
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 458 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 279
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 278 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 99
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 98 DTESGSIASPS 66
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 99 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 278
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 279 RLPALGAPG 305
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 241 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 128
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 354 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 449
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -3
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 445 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 353
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -1
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 306 ALGPRGLAVDGIDLVLALLEGERS 235
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 513 SIFIVST*IPDQVLCCQ 463
>gb|BU983417.1|BU983417 HA29K18r HA Hordeum vulgare subsp. vulgare cDNA clone HA29K18
5-PRIME, mRNA sequence
Length = 575
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 46 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 225
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 226 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 405
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 406 NYG*GRA 426
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 428 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 249
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 248 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 69
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 68 DTESGSIASPS 36
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 69 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 248
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 249 RLPALGAPG 275
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 211 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 98
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 324 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 419
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 415 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 323
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 276 ALGPRGLAVDGIDLVLALLEGERS 205
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 483 SIFIVST*IPDQVLCCQ 433
>gb|BU984022.1|BU984022 HA31M02r HA Hordeum vulgare subsp. vulgare cDNA clone HA31M02
5-PRIME, mRNA sequence
Length = 574
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +2
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 125 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 304
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 305 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 484
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 485 NYG*GRA 505
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -2
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 507 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 328
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 327 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 148
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 147 DTESGSIASPS 115
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 148 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 327
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 328 RLPALGAPG 354
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 290 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 177
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 403 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 498
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -3
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 494 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 402
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -1
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 355 ALGPRGLAVDGIDLVLALLEGERS 284
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 562 SIFIVST*IPDQVLCCQ 512
>gb|BU997399.1|BU997399 HI07N23r HI Hordeum vulgare subsp. vulgare cDNA clone HI07N23
5-PRIME, mRNA sequence
Length = 624
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +2
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 83 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 262
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 263 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 442
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 443 NYG*GRA 463
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 465 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 286
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 285 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 106
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 105 DTESGSIASPS 73
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 106 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 285
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 286 RLPALGAPG 312
Score = 69.8 bits (146), Expect(4) = 2e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 248 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 135
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 361 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 456
Score = 46.9 bits (96), Expect(4) = 2e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 452 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 360
Score = 41.8 bits (85), Expect(4) = 2e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 313 ALGPRGLAVDGIDLVLALLEGERS 242
Score = 21.7 bits (41), Expect(4) = 2e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 520 SIFIVST*IPDQVLCCQ 470
>gb|BU998875.1|BU998875 HI12G19r HI Hordeum vulgare subsp. vulgare cDNA clone HI12G19
5-PRIME, mRNA sequence
Length = 574
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 31 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 210
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 211 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 390
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 391 NYG*GRA 411
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 413 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 234
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 233 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 54
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 53 DTESGSIASPS 21
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 54 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 233
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 234 RLPALGAPG 260
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 196 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 83
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 309 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 404
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 400 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 308
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 261 ALGPRGLAVDGIDLVLALLEGERS 190
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 468 SIFIVST*IPDQVLCCQ 418
>gb|BU999832.1|BU999832 HI15P15r HI Hordeum vulgare subsp. vulgare cDNA clone HI15P15
5-PRIME, mRNA sequence
Length = 534
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +2
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 23 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 202
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 203 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 382
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 383 NYG*GRA 403
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 405 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 226
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 225 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 46
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 45 DTESGSIASPS 13
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 46 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 225
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 226 RLPALGAPG 252
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 188 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 75
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 301 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 396
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 392 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 300
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 253 ALGPRGLAVDGIDLVLALLEGERS 182
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 460 SIFIVST*IPDQVLCCQ 410
>gb|CA013173.1|CA013173 HT07J22r HT Hordeum vulgare subsp. vulgare cDNA clone HT07J22
5-PRIME, mRNA sequence
Length = 504
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 40 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 219
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 220 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 399
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 400 NYG*GRA 420
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -2
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 422 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 243
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 242 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 63
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 62 DTESGSIASPS 30
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 63 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 242
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 243 RLPALGAPG 269
Score = 69.8 bits (146), Expect(4) = 9e-028
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 205 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 92
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 318 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 413
Score = 46.9 bits (96), Expect(4) = 9e-028
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -3
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 409 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 317
Score = 41.8 bits (85), Expect(4) = 9e-028
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -1
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 270 ALGPRGLAVDGIDLVLALLEGERS 199
Score = 21.7 bits (41), Expect(4) = 9e-028
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 477 SIFIVST*IPDQVLCCQ 427
>gb|CA013628.1|CA013628 HT09A18r HT Hordeum vulgare subsp. vulgare cDNA clone HT09A18
5-PRIME, mRNA sequence
Length = 650
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 46 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 225
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 226 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 405
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 406 NYG*GRA 426
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 428 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 249
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 248 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 69
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 68 DTESGSIASPS 36
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 69 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 248
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 249 RLPALGAPG 275
Score = 69.8 bits (146), Expect(4) = 2e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 211 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 98
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 324 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 419
Score = 46.9 bits (96), Expect(4) = 2e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 415 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 323
Score = 41.8 bits (85), Expect(4) = 2e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 276 ALGPRGLAVDGIDLVLALLEGERS 205
Score = 21.7 bits (41), Expect(4) = 2e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 483 SIFIVST*IPDQVLCCQ 433
>gb|CA021210.1|CA021210 HZ39H02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39H02
5-PRIME, mRNA sequence
Length = 580
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 69 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 248
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 249 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 428
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 429 NYG*GRA 449
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 451 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 272
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 271 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 92
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 91 DTESGSIASPS 59
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 92 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 271
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 272 RLPALGAPG 298
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 234 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 121
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 347 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 442
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 438 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 346
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 299 ALGPRGLAVDGIDLVLALLEGERS 228
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 506 SIFIVST*IPDQVLCCQ 456
>gb|CA024625.1|CA024625 HZ49N10r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49N10
5-PRIME, mRNA sequence
Length = 464
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 81 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 260
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 261 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 440
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 441 NYG*GRA 461
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -2
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 463 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 284
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 283 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 104
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 103 DTESGSIASPS 71
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 104 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 283
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 284 RLPALGAPG 310
Score = 69.8 bits (146), Expect(3) = 6e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 246 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 133
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 359 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 454
Score = 46.9 bits (96), Expect(3) = 6e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -3
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 450 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 358
Score = 41.8 bits (85), Expect(3) = 6e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -1
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 311 ALGPRGLAVDGIDLVLALLEGERS 240
>gb|CA025039.1|CA025039 HZ51A19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51A19
5-PRIME, mRNA sequence
Length = 474
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +2
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 14 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 193
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 194 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 373
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 374 NYG*GRA 394
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 396 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 217
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 216 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 37
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 36 DTESGSIASPS 4
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 37 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 216
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 217 RLPALGAPG 243
Score = 69.8 bits (146), Expect(4) = 7e-028
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 179 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 66
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 292 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 387
Score = 46.9 bits (96), Expect(4) = 7e-028
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 383 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 291
Score = 41.8 bits (85), Expect(4) = 7e-028
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 244 ALGPRGLAVDGIDLVLALLEGERS 173
Score = 21.7 bits (41), Expect(4) = 7e-028
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 451 SIFIVST*IPDQVLCCQ 401
>gb|CA025246.1|CA025246 HZ51J13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51J13
5-PRIME, mRNA sequence
Length = 561
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 34 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 213
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 214 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 393
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 394 NYG*GRA 414
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -2
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 416 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 237
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 236 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 57
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 56 DTESGSIASPS 24
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 57 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 236
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 237 RLPALGAPG 263
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 199 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 86
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 312 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 407
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -3
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 403 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 311
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -1
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 264 ALGPRGLAVDGIDLVLALLEGERS 193
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 471 SIFIVST*IPDQVLCCQ 421
>gb|CA029397.1|CA029397 HZ65B13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65B13
5-PRIME, mRNA sequence
Length = 564
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 39 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 218
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 219 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 398
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 399 NYG*GRA 419
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 421 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 242
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 241 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 62
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 61 DTESGSIASPS 29
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 62 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 241
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 242 RLPALGAPG 268
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 204 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 91
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 317 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 412
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 408 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 316
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 269 ALGPRGLAVDGIDLVLALLEGERS 198
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 476 SIFIVST*IPDQVLCCQ 426
>gb|BJ549122.1|BJ549122 BJ549122 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29h16 5', mRNA sequence
Length = 637
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 84 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 263
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 264 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 443
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 444 NYG*GRA 464
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 466 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 287
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 286 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 107
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 106 DTESGSIASPS 74
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 107 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 286
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 287 RLPALGAPG 313
Score = 69.8 bits (146), Expect(4) = 2e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 249 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 136
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 362 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 457
Score = 46.9 bits (96), Expect(4) = 2e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 453 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 361
Score = 41.8 bits (85), Expect(4) = 2e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 314 ALGPRGLAVDGIDLVLALLEGERS 243
Score = 21.7 bits (41), Expect(4) = 2e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 521 SIFIVST*IPDQVLCCQ 471
>gb|CB860038.1|CB860038 HI12G19w HI Hordeum vulgare subsp. vulgare cDNA clone HI12G19
3-PRIME, mRNA sequence
Length = 586
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / -1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 544 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 365
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 364 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 185
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 184 NYG*GRA 164
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / +3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 162 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 341
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 342 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 521
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 522 DTESGSIASPS 554
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / -3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 521 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 342
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 341 RLPALGAPG 315
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / +1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 379 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 492
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / -3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 266 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 171
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / +1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 175 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 267
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / +2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 314 ALGPRGLAVDGIDLVLALLEGERS 385
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / +2
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 107 SIFIVST*IPDQVLCCQ 157
>gb|CV056266.1|CV056266 BNEL15G6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL15G6 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 581
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 73 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 252
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 253 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 432
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 433 NYG*GRA 453
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 455 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 276
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 275 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 96
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 95 DTESGSIASPS 63
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 96 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 275
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 276 RLPALGAPG 302
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 238 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 125
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 351 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 446
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 442 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 350
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 303 ALGPRGLAVDGIDLVLALLEGERS 232
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 510 SIFIVST*IPDQVLCCQ 460
>gb|CV056531.1|CV056531 BNEL18H1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL18H1 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 596
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +2
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 71 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 250
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 251 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 430
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 431 NYG*GRA 451
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 453 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 274
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 273 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 94
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 93 DTESGSIASPS 61
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 94 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 273
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 274 RLPALGAPG 300
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 236 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 123
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 349 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 444
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 440 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 348
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 301 ALGPRGLAVDGIDLVLALLEGERS 230
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 508 SIFIVST*IPDQVLCCQ 458
>gb|CV057063.1|CV057063 BNEL23f12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL23f12 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 610
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +2
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 80 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 259
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 260 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 439
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 440 NYG*GRA 460
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -2
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 462 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 283
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 282 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 103
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 102 DTESGSIASPS 70
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 103 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 282
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 283 RLPALGAPG 309
Score = 69.8 bits (146), Expect(4) = 2e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 245 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 132
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 358 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 453
Score = 46.9 bits (96), Expect(4) = 2e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -3
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 449 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 357
Score = 41.8 bits (85), Expect(4) = 2e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -1
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 310 ALGPRGLAVDGIDLVLALLEGERS 239
Score = 21.7 bits (41), Expect(4) = 2e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 517 SIFIVST*IPDQVLCCQ 467
>gb|CV058783.1|CV058783 BNEL40h1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL40h1 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 598
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 79 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 258
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 259 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 438
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 439 NYG*GRA 459
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 461 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 282
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 281 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 102
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 101 DTESGSIASPS 69
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 102 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 281
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 282 RLPALGAPG 308
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 244 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 131
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 357 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 452
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 448 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 356
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 309 ALGPRGLAVDGIDLVLALLEGERS 238
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -2
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 516 SIFIVST*IPDQVLCCQ 466
>gb|CV058787.1|CV058787 BNEL40h2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL40h2 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 585
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / -3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 532 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 353
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 352 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 173
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 172 NYG*GRA 152
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / +3
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 150 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 329
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 330 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 509
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 510 DTESGSIASPS 542
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / -2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 509 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 330
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 329 RLPALGAPG 303
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / +1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 367 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 480
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / -2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 254 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 159
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / +1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 163 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 255
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / +2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 302 ALGPRGLAVDGIDLVLALLEGERS 373
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / +2
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 95 SIFIVST*IPDQVLCCQ 145
>gb|CV060449.1|CV060449 BNEL58c2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL58c2 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 535
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 69 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 248
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 249 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 428
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 429 NYG*GRA 449
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 451 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLXGCSPGPVVMVPETKTRTPPWGPEGWQS 272
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 271 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 92
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 91 DTESGSIASPS 59
Score = 109 bits (233), Expect(2) = 8e-034
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 92 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 271
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 272 RLPALGAPG 298
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 234 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 121
Score = 54.2 bits (112), Expect(2) = 8e-034
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 347 APXQVLTDVPFAASWRELLRAE*HVPPELWLR 442
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 438 NHSSGGTCHSARRSSLQLAANGTSVRT*XGA 346
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 299 ALGPRGLAVDGIDLVLALLEGERS 228
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 506 SIFIVST*IPDQVLCCQ 456
>gb|CV061757.1|CV061757 BNEL71f1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL71f1 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 541
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 69 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 248
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 249 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 428
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 429 NYG*GRA 449
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 451 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 272
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 271 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 92
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 91 DTESGSIASPS 59
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 92 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 271
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 272 RLPALGAPG 298
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 234 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 121
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 347 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 442
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 438 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 346
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 299 ALGPRGLAVDGIDLVLALLEGERS 228
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 506 SIFIVST*IPDQVLCCQ 456
>gb|CK122329.1|CK122329 BES1824102o02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010O022 5-PRIME, mRNA sequence
Length = 774
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 73 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 252
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 253 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 432
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 433 NYG*GRA 453
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -2
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 455 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 276
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 275 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 96
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 95 DTESGSIASPS 63
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 96 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 275
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 276 RLPALGAPG 302
Score = 69.8 bits (146), Expect(4) = 3e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 238 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 125
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 351 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 446
Score = 46.9 bits (96), Expect(4) = 3e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -3
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 442 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 350
Score = 41.8 bits (85), Expect(4) = 3e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -1
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 303 ALGPRGLAVDGIDLVLALLEGERS 232
Score = 21.7 bits (41), Expect(4) = 3e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 510 SIFIVST*IPDQVLCCQ 460
>gb|CK123815.1|CK123815 BES1824105g24 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G245 5-PRIME, mRNA sequence
Length = 644
Score = 258 bits (558), Expect = 2e-068
Identities = 103/127 (81%), Positives = 117/127 (92%)
Frame = +1 / +3
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 33 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 212
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 213 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 392
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 393 NYG*GRA 413
Score = 219 bits (472), Expect = 2e-056
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -2
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 415 AALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 236
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 235 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 56
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 55 DTESGSIASPS 23
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +2
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 56 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 235
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 236 RLPALGAPG 262
Score = 69.8 bits (146), Expect(4) = 2e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 198 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 85
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +2
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 311 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 406
Score = 46.9 bits (96), Expect(4) = 2e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -3
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 402 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 310
Score = 41.8 bits (85), Expect(4) = 2e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -1
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 263 ALGPRGLAVDGIDLVLALLEGERS 192
Score = 21.7 bits (41), Expect(4) = 2e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 470 SIFIVST*IPDQVLCCQ 420
>gb|BM371480.2|BM371480 EBma08_SQ002_O06_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_O06 5', mRNA sequence
Length = 581
Score = 258 bits (557), Expect = 3e-068
Identities = 102/124 (82%), Positives = 116/124 (93%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 73 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 252
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 253 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 432
Query: 481 NYG* 492
NYG*
Sbjct: 433 NYG* 444
Score = 220 bits (475), Expect = 7e-057
Identities = 98/131 (74%), Positives = 102/131 (77%)
Frame = -1 / -1
Query: 503 SAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQS 324
+A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQS
Sbjct: 455 AALH*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQS 276
Query: 323 TVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAF 144
TV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 275 TVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAF 96
Query: 143 ATASGSIAITS 111
T SGSIA S
Sbjct: 95 DTESGSIASPS 63
Score = 109 bits (233), Expect(2) = 2e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 96 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 275
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 276 RLPALGAPG 302
Score = 69.8 bits (146), Expect(4) = 1e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 238 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 125
Score = 52.8 bits (109), Expect(2) = 2e-033
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWL 491
AP QVL +PFAA LLRAE*HVPPELWL
Sbjct: 351 APPQVLTDVPFAASWRELLRAE*HVPPELWL 443
Score = 46.9 bits (96), Expect(4) = 1e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 442 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 350
Score = 41.8 bits (85), Expect(4) = 1e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 303 ALGPRGLAVDGIDLVLALLEGERS 232
Score = 21.7 bits (41), Expect(4) = 1e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 510 SIFIVST*IPDQVLCCQ 460
>gb|CA023173.1|CA023173 HZ45H05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ45H05
5-PRIME, mRNA sequence
Length = 455
Score = 258 bits (557), Expect = 3e-068
Identities = 102/124 (82%), Positives = 116/124 (93%)
Frame = +1 / +2
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 77 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 256
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 257 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 436
Query: 481 NYG* 492
NYG*
Sbjct: 437 NYG* 448
Score = 218 bits (470), Expect = 3e-056
Identities = 97/127 (76%), Positives = 99/127 (77%)
Frame = -1 / -3
Query: 491 *P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQSTVTI 312
*P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQSTV+I
Sbjct: 447 *P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQSTVSI 268
Query: 311 WCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAFATAS 132
C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF T S
Sbjct: 267 LCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAFDTES 88
Query: 131 GSIAITS 111
GSIA S
Sbjct: 87 GSIASPS 67
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 100 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 279
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 280 RLPALGAPG 306
Score = 69.8 bits (146), Expect(3) = 6e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 242 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 129
Score = 53.8 bits (111), Expect(2) = 1e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 355 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 450
Score = 46.9 bits (96), Expect(3) = 6e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -1
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 446 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 354
Score = 41.8 bits (85), Expect(3) = 6e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -2
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 307 ALGPRGLAVDGIDLVLALLEGERS 236
>gb|BF260888.3|BF260888 HVSMEf0023D08f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023D08f, mRNA sequence
Length = 701
Score = 255 bits (552), Expect = 2e-067
Identities = 102/127 (80%), Positives = 116/127 (91%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 37 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 216
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFV G+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 217 CQHKIDTVDCQPSGPQGGVLVFVFGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 396
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 397 NYG*GKA 417
Score = 216 bits (466), Expect = 1e-055
Identities = 96/127 (75%), Positives = 99/127 (77%)
Frame = -1 / -1
Query: 491 *P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQSTVTI 312
*P*FRRNMSFCT K P AGSKWN ENL GCS GPV M P+TKT PPWGP+GWQSTV+I
Sbjct: 407 *P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPKTKTRTPPWGPEGWQSTVSI 228
Query: 311 WCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAFATAS 132
C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF T S
Sbjct: 227 LCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAFDTES 48
Query: 131 GSIAITS 111
GSIA S
Sbjct: 47 GSIASPS 27
Score = 106 bits (227), Expect(2) = 7e-033
Identities = 48/68 (70%), Positives = 52/68 (76%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 60 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 239
Query: 324 RLPAVGAP 347
RLPA+GAP
Sbjct: 240 RLPALGAP 263
Score = 69.8 bits (146), Expect(4) = 2e-027
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 202 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 89
Score = 53.8 bits (111), Expect(2) = 7e-033
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 315 APPQVLTDVPFAASWRELLRAE*HVPPELWLR 410
Score = 46.9 bits (96), Expect(4) = 2e-027
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 406 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 314
Score = 41.8 bits (85), Expect(4) = 2e-027
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 267 ALGPRGLAVDGIDLVLALLEGERS 196
Score = 21.7 bits (41), Expect(4) = 2e-027
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -3
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 474 SIFIVST*IPDQVLCCQ 424
>gb|BE193362.2|BE193362 HVSMEh0080L17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0080L17f, mRNA sequence
Length = 696
Score = 253 bits (546), Expect = 1e-066
Identities = 100/125 (80%), Positives = 115/125 (92%)
Frame = +1 / +2
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 41 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 220
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFV G+I TGP EHP+KFSQ HLLPA GSF+VQNDMFRL
Sbjct: 221 CQHKIDTVDCQPSGPQGGVLVFVFGTITTGPGEHPLKFSQMVHLLPAGGSFYVQNDMFRL 400
Query: 481 NYG*K 495
NYG*+
Sbjct: 401 NYG*R 415
Score = 207 bits (446), Expect = 7e-053
Identities = 94/134 (70%), Positives = 100/134 (74%)
Frame = -1 / -1
Query: 512 QEFSAVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDG 333
Q++ + P*FRRNMSFCT K P AGSK ENL GCS GPV M P+TKT PPWGP+G
Sbjct: 432 QKWPPLLYP*FRRNMSFCT*KLPPAGSK*TICENLRGCSPGPVVMVPKTKTRTPPWGPEG 253
Query: 332 WQSTVTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CST 153
WQSTV+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T
Sbjct: 252 WQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*T 73
Query: 152 KAFATASGSIAITS 111
AF T SGSIA S
Sbjct: 72 NAFDTESGSIASPS 31
Score = 109 bits (233), Expect(2) = 1e-033
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 64 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 243
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 244 RLPALGAPG 270
Score = 69.8 bits (146), Expect(3) = 9e-028
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 206 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 93
Score = 53.3 bits (110), Expect(2) = 1e-033
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = +3 / +1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLKDSRKLL 512
AP QVL FAA LLRAE*HVPPELW+K+ R LL
Sbjct: 319 APPQVLTDGSFAASWRELLRAE*HVPPELWVKEGRPLL 432
Score = 49.6 bits (102), Expect(3) = 9e-028
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = -2 / -2
Query: 511 KSFRLSFSHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+S R SF+HSSGGTCHSARR + AAN RT* GA
Sbjct: 431 RSGRPSFTHSSGGTCHSARRSSLQLAANEPSVRT*GGA 318
Score = 41.8 bits (85), Expect(3) = 9e-028
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 271 ALGPRGLAVDGIDLVLALLEGERS 200
>gb|BI779400.2|BI779400 EBro01_SQ003_O11_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ003_O11 5', mRNA sequence
Length = 654
Score = 250 bits (540), Expect = 8e-066
Identities = 101/127 (79%), Positives = 115/127 (90%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAAL GLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 76 AMDPDSVSKAFVQHYYQTFDSNRAALGGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 255
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVD QPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 256 CQHKIDTVDWQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 435
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 436 NYG*GRA 456
Score = 207 bits (446), Expect = 7e-053
Identities = 92/123 (74%), Positives = 95/123 (77%)
Frame = -1 / -2
Query: 488 P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQSTVTIW 309
P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+G QSTV+I
Sbjct: 443 P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGCQSTVSIL 264
Query: 308 CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAFATASG 129
C WKGRDPSLPAMA GP NF PSKVSM+ S YSP SAARL SNV **C T AF T SG
Sbjct: 263 CWHCWKGRDPSLPAMAAGPPNFSPSKVSMDPSWYSPPSAARLESNVW**C*TNAFDTESG 84
Query: 128 SIA 120
SIA
Sbjct: 83 SIA 75
Score = 100 bits (214), Expect(2) = 1e-030
Identities = 46/69 (66%), Positives = 51/69 (73%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G +HAHLRG EV RH QARIS LP + A DR+R
Sbjct: 99 EGVRSALLPDVRLQPRRAGGAVPGRVHAHLRGREVRRARRHRWQARISPLPAVPAQDRYR 278
Query: 324 RLPAVGAPG 350
RL A+GAPG
Sbjct: 279 RLAALGAPG 305
Score = 67.0 bits (140), Expect(4) = 6e-026
Identities = 26/38 (68%), Positives = 28/38 (73%)
Frame = -2 / -3
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR TS PRR*AW P TAPPA RGW RT
Sbjct: 241 EIRACQRWRRARRTSRPRR*AWTRPGTAPPARRGWSRT 128
Score = 52.4 bits (108), Expect(2) = 1e-030
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LLRAE*HVPPELW++
Sbjct: 354 APPQVLTDVPFAASWRELLRAE*HVPPELWVR 449
Score = 46.9 bits (96), Expect(4) = 6e-026
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -3
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSARR + AANG RT* GA
Sbjct: 445 THSSGGTCHSARRSSLQLAANGTSVRT*GGA 353
Score = 39.6 bits (80), Expect(4) = 6e-026
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -3 / -1
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR L VDG DLVLA LEG+RS
Sbjct: 306 ALGPRGLPVDGIDLVLALLEGERS 235
Score = 21.7 bits (41), Expect(4) = 6e-026
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 560 SVFIVST*SP*QIRSSQ 510
S+FIVST* P Q+ Q
Sbjct: 513 SIFIVST*IPDQVLCCQ 463
>gb|BU978165.1|BU978165 HA12L01r HA Hordeum vulgare subsp. vulgare cDNA clone HA12L01
5-PRIME, mRNA sequence
Length = 466
Score = 248 bits (537), Expect = 2e-065
Identities = 98/120 (81%), Positives = 112/120 (93%)
Frame = +1 / +2
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 107 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 286
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 287 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 466
Score = 211 bits (455), Expect = 4e-054
Identities = 93/123 (75%), Positives = 95/123 (77%)
Frame = -1 / -2
Query: 479 RRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQSTVTIWCSQ 300
RRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQSTV+I C
Sbjct: 465 RRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQSTVSILCWH 286
Query: 299 AWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAFATASGSIA 120
WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF T SGSIA
Sbjct: 285 CWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAFDTESGSIA 106
Query: 119 ITS 111
S
Sbjct: 105 SPS 97
Score = 109 bits (233), Expect(2) = 4e-030
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 130 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 309
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 310 RLPALGAPG 336
Score = 69.8 bits (146), Expect(3) = 1e-024
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 272 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 159
Score = 41.8 bits (85), Expect(2) = 4e-030
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +3 / +1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPP 479
AP QVL +PFAA LLRAE*HVPP
Sbjct: 385 APPQVLTDVPFAASWRELLRAE*HVPP 465
Score = 41.8 bits (85), Expect(3) = 1e-024
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -1
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 337 ALGPRGLAVDGIDLVLALLEGERS 266
Score = 39.1 bits (79), Expect(3) = 1e-024
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = -2 / -3
Query: 478 GGTCHSARRRTQLPAANGMPGRT*WGA 398
GGTCHSARR + AANG RT* GA
Sbjct: 464 GGTCHSARRSSLQLAANGTSVRT*GGA 384
>gb|CA027739.1|CA027739 HZ59O02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59O02
5-PRIME, mRNA sequence
Length = 424
Score = 248 bits (537), Expect = 2e-065
Identities = 98/120 (81%), Positives = 112/120 (93%)
Frame = +1 / +2
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 65 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 244
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 245 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 424
Score = 211 bits (455), Expect = 4e-054
Identities = 93/123 (75%), Positives = 95/123 (77%)
Frame = -1 / -2
Query: 479 RRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQSTVTIWCSQ 300
RRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQSTV+I C
Sbjct: 423 RRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQSTVSILCWH 244
Query: 299 AWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAFATASGSIA 120
WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF T SGSIA
Sbjct: 243 CWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAFDTESGSIA 64
Query: 119 ITS 111
S
Sbjct: 63 SPS 55
Score = 109 bits (233), Expect(2) = 4e-030
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +1
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 88 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 267
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 268 RLPALGAPG 294
Score = 69.8 bits (146), Expect(3) = 1e-024
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 230 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 117
Score = 41.8 bits (85), Expect(2) = 4e-030
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +3 / +1
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPP 479
AP QVL +PFAA LLRAE*HVPP
Sbjct: 343 APPQVLTDVPFAASWRELLRAE*HVPP 423
Score = 41.8 bits (85), Expect(3) = 1e-024
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -1
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 295 ALGPRGLAVDGIDLVLALLEGERS 224
Score = 39.1 bits (79), Expect(3) = 1e-024
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = -2 / -3
Query: 478 GGTCHSARRRTQLPAANGMPGRT*WGA 398
GGTCHSARR + AANG RT* GA
Sbjct: 422 GGTCHSARRSSLQLAANGTSVRT*GGA 342
>gb|CK123436.1|CK123436 BES1824104a20 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010A204 5-PRIME, mRNA sequence
Length = 593
Score = 248 bits (537), Expect = 2e-065
Identities = 101/127 (79%), Positives = 114/127 (89%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 73 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 252
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 480
C+H+I TVD PSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF VQNDMFRL
Sbjct: 253 CQHKIDTVDXXPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFXVQNDMFRL 432
Query: 481 NYG*KTA 501
NYG* A
Sbjct: 433 NYG*GRA 453
Score = 212 bits (458), Expect = 2e-054
Identities = 97/130 (74%), Positives = 100/130 (76%)
Frame = -1 / -1
Query: 500 AVF*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQST 321
A+ *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+G QST
Sbjct: 452 ALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGXQST 273
Query: 320 VTIWCSQAWKGRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAFA 141
V+I C WKGRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF
Sbjct: 272 VSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAFD 93
Query: 140 TASGSIAITS 111
T SGSIA S
Sbjct: 92 TESGSIASPS 63
Score = 105 bits (224), Expect(2) = 1e-031
Identities = 48/69 (69%), Positives = 52/69 (75%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 96 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 275
Query: 324 RLPAVGAPG 350
RL A+GAPG
Sbjct: 276 RLXALGAPG 302
Score = 69.8 bits (146), Expect(3) = 1e-025
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 238 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 125
Score = 51.0 bits (105), Expect(2) = 1e-031
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*HVPPELWLK 494
AP QVL +PFAA LL AE*HVPPELWL+
Sbjct: 351 APPQVLTDVPFAASWRELLXAE*HVPPELWLR 446
Score = 44.1 bits (90), Expect(3) = 1e-025
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -2 / -2
Query: 490 SHSSGGTCHSARRRTQLPAANGMPGRT*WGA 398
+HSSGGTCHSA R + AANG RT* GA
Sbjct: 442 NHSSGGTCHSAXRSSLQLAANGTSVRT*GGA 350
Score = 40.0 bits (81), Expect(3) = 1e-025
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -3 / -3
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR L VDG DLVLA LEG+RS
Sbjct: 303 ALGPRGLXVDGIDLVLALLEGERS 232
>gb|BF259294.3|BF259294 HVSMEf0018M24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0018M24f, mRNA sequence
Length = 723
Score = 240 bits (519), Expect(2) = 6e-064
Identities = 94/117 (80%), Positives = 109/117 (93%)
Frame = +1 / +1
Query: 121 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 300
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 109 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 288
Query: 301 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDM 471
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA G+F+VQNDM
Sbjct: 289 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGNFYVQNDM 459
Score = 204 bits (440), Expect(2) = 1e-052
Identities = 90/120 (75%), Positives = 92/120 (76%)
Frame = -1 / -2
Query: 470 MSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQSTVTIWCSQAWK 291
MSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQSTV+I C WK
Sbjct: 458 MSFCT*KFPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQSTVSILCWHCWK 279
Query: 290 GRDPSLPAMADGPWNFWPSKVSMEVS*YSPTSAARLVSNVR**CSTKAFATASGSIAITS 111
GRDPSLPAMA GP NF PSKVSME S YSPTSAARL SNV **C T AF T SGSIA S
Sbjct: 278 GRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAFDTESGSIASPS 99
Score = 109 bits (233), Expect(2) = 1e-027
Identities = 49/69 (71%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 144 ESLRGALLPDVRHQPRGAGGAVSGDLHAHLRGPEVPGPIRHCRQARISSLPGLRAPDRHR 323
E +R ALLPDVR QPR AGGAV G LHAHLRG EV P RH QARIS LP + A DR+R
Sbjct: 132 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 311
Query: 324 RLPAVGAPG 350
RLPA+GAPG
Sbjct: 312 RLPALGAPG 338
Score = 69.8 bits (146), Expect(3) = 2e-022
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 286 EIRACRQWRMGPGTSGPRR*AWRSPDTAPPAPRGWCRT 173
EIRAC++WR G TS PRR*AW P TAPPA RGW RT
Sbjct: 274 EIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRT 161
Score = 41.8 bits (85), Expect(3) = 2e-022
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3 / -1
Query: 351 SLGPRRLAVDGDDLVLAGLEGKRS 280
+LGPR LAVDG DLVLA LEG+RS
Sbjct: 339 ALGPRGLAVDGIDLVLALLEGERS 268
Score = 33.6 bits (67), Expect(2) = 1e-027
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = +3 / +3
Query: 399 APHQVLPGIPFAAGSWVLLRAE*H 470
AP QVL +PFAA LLRAE*H
Sbjct: 387 APPQVLTDVPFAASWRELLRAE*H 458
Score = 31.3 bits (62), Expect(3) = 2e-022
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -2 / -3
Query: 469 CHSARRRTQLPAANGMPGRT*WGA 398
CHSARR + AANG RT* GA
Sbjct: 457 CHSARRSSLQLAANGTSVRT*GGA 386
Score = 24.0 bits (46), Expect(2) = 6e-064
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +3 / +1
Query: 471 VPPELWLKD 497
VPPELW+K+
Sbjct: 460 VPPELWVKE 486
Score = 22.1 bits (42), Expect(2) = 1e-052
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2 / -2
Query: 499 LSFSHSSGGT 470
LS +HSSGGT
Sbjct: 488 LSLTHSSGGT 459
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 349,384,935
Number of Sequences: 312970
Number of extensions: 5476463
Number of successful extensions: 77135
Number of sequences better than 1.0e-020: 135
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 8653008636
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)