TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441327.2.1
(884 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL503324.1|AL503324 AL503324 Hordeum vulgare Barke roots... 272 2e-072
gb|BF621550.2|BF621550 HVSMEa0011F24f Hordeum vulgare seedl... 271 4e-072
gb|BF066033.2|BF066033 HV_CEb0014K12f Hordeum vulgare seedl... 182 5e-071
gb|BF622215.3|BF622215 HVSMEa0002A20f Hordeum vulgare seedl... 256 1e-067
gb|BF622224.2|BF622224 HVSMEa0002C05f Hordeum vulgare seedl... 253 1e-066
gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare s... 215 4e-063
gb|BF264380.2|BF264380 HV_CEa0009E08f Hordeum vulgare seedl... 140 4e-063
gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedl... 196 3e-062
gb|BF622265.2|BF622265 HVSMEa0002G13f Hordeum vulgare seedl... 237 5e-062
gb|BJ547778.1|BJ547778 BJ547778 K. Sato unpublished cDNA li... 192 8e-059
gb|BJ548902.1|BJ548902 BJ548902 K. Sato unpublished cDNA li... 165 1e-058
gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA li... 204 2e-058
gb|BJ547635.1|BJ547635 BJ547635 K. Sato unpublished cDNA li... 192 3e-058
gb|BF629286.3|BF629286 HVSMEb0010K15f Hordeum vulgare seedl... 218 1e-057
gb|AV933203.1|AV933203 AV933203 K. Sato unpublished cDNA li... 189 1e-057
gb|BF621862.3|BF621862 HVSMEa0001C05f Hordeum vulgare seedl... 222 2e-057
gb|BF625550.2|BF625550 HVSMEa0011E08f Hordeum vulgare seedl... 221 3e-057
gb|BF624618.2|BF624618 HVSMEa0017E14f Hordeum vulgare seedl... 212 5e-057
gb|BE421272.1|BE421272 HWM007.F01 ITEC HWM Barley Leaf Libr... 188 7e-057
gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedl... 211 2e-056
gb|BJ548150.1|BJ548150 BJ548150 K. Sato unpublished cDNA li... 155 1e-055
gb|BQ466487.1|BQ466487 HT02K21r HT Hordeum vulgare subsp. v... 216 1e-055
gb|BG299731.1|BG299731 HVSMEa0021J09f Hordeum vulgare seedl... 215 2e-055
gb|BQ762933.1|BQ762933 EBro02_SQ006_H16 _R root, 3 week, hy... 208 4e-053
gb|BF625970.2|BF625970 HVSMEa0015B01f Hordeum vulgare seedl... 207 6e-053
gb|BE195630.3|BE195630 HVSMEh0089P24f Hordeum vulgare 5-45 ... 184 1e-052
gb|BF623115.2|BF623115 HVSMEa0014H14f Hordeum vulgare seedl... 167 2e-052
gb|BM816911.1|BM816911 HB106C10_SK.ab1 HB Hordeum vulgare s... 156 6e-052
gb|BE421080.1|BE421080 HWM005.F01 ITEC HWM Barley Leaf Libr... 190 3e-051
gb|BJ544573.1|BJ544573 BJ544573 K. Sato unpublished cDNA li... 201 4e-051
gb|BJ544235.1|BJ544235 BJ544235 K. Sato unpublished cDNA li... 201 5e-051
gb|CA013731.1|CA013731 HT09F05r HT Hordeum vulgare subsp. v... 199 1e-050
gb|BF621473.2|BF621473 HVSMEa0011B16f Hordeum vulgare seedl... 189 5e-050
gb|BF622512.2|BF622512 HVSMEa0004K18f Hordeum vulgare seedl... 197 9e-050
gb|BF624202.2|BF624202 HVSMEa0012J22f Hordeum vulgare seedl... 197 9e-050
gb|AL504140.1|AL504140 AL504140 Hordeum vulgare Barke roots... 114 1e-049
gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. v... 194 4e-049
gb|BE214950.1|BE214950 HV_CEb0005F03f Hordeum vulgare seedl... 192 3e-048
gb|BJ548512.1|BJ548512 BJ548512 K. Sato unpublished cDNA li... 130 4e-048
gb|BJ548248.1|BJ548248 BJ548248 K. Sato unpublished cDNA li... 128 1e-047
gb|AL505815.1|AL505815 AL505815 Hordeum vulgare Barke roots... 188 3e-047
gb|BM369733.2|BM369733 EBem07_SQ004_H07_R embryo, 28 DPA, n... 188 3e-047
gb|BF065184.1|BF065184 HV_CEb0023O18f Hordeum vulgare seedl... 187 1e-046
gb|BF257478.2|BF257478 HVSMEf0013A10f Hordeum vulgare seedl... 186 1e-046
gb|BF623190.3|BF623190 HVSMEa0015C04f Hordeum vulgare seedl... 177 2e-046
gb|CA011829.1|CA011829 HT03K17r HT Hordeum vulgare subsp. v... 185 3e-046
gb|BI954235.1|BI954235 HVSMEm0016M03f Hordeum vulgare green... 91 5e-046
gb|BU989585.1|BU989585 HF22C07r HF Hordeum vulgare subsp. v... 172 6e-046
gb|BJ548403.1|BJ548403 BJ548403 K. Sato unpublished cDNA li... 122 8e-046
gb|BJ548926.1|BJ548926 BJ548926 K. Sato unpublished cDNA li... 122 8e-046
gb|CA025935.1|CA025935 HZ53J07r HZ Hordeum vulgare subsp. v... 138 8e-046
gb|BF622191.2|BF622191 HVSMEa0001P16f Hordeum vulgare seedl... 183 9e-046
gb|BJ548749.1|BJ548749 BJ548749 K. Sato unpublished cDNA li... 122 1e-045
gb|BG299590.1|BG299590 HVSMEa0020O20f Hordeum vulgare seedl... 182 2e-045
gb|BF259796.2|BF259796 HVSMEf0020E15f Hordeum vulgare seedl... 149 2e-045
gb|BE602564.3|BE602564 HVSMEh0100A01f Hordeum vulgare 5-45 ... 182 2e-045
gb|BJ549023.1|BJ549023 BJ549023 K. Sato unpublished cDNA li... 119 6e-045
gb|AV936388.1|AV936388 AV936388 K. Sato unpublished cDNA li... 119 6e-045
gb|BJ548710.1|BJ548710 BJ548710 K. Sato unpublished cDNA li... 119 6e-045
gb|BF626678.2|BF626678 HVSMEb0001A21f Hordeum vulgare seedl... 179 2e-044
gb|AV908971.1|AV908971 AV908971 K. Sato unpublished cDNA li... 179 2e-044
gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. v... 179 2e-044
gb|BQ472178.1|BQ472178 HV04K06r HV Hordeum vulgare subsp. v... 177 6e-044
gb|BQ765875.1|BQ765875 EBro03_SQ008_M07_R root, 3 week, wat... 174 5e-043
gb|BG368894.1|BG368894 HVSMEi0021D06f Hordeum vulgare 20 DA... 119 5e-043
gb|BF623830.2|BF623830 HVSMEa0007D03f Hordeum vulgare seedl... 174 7e-043
gb|BF623248.2|BF623248 HVSMEa0016A09f Hordeum vulgare seedl... 174 7e-043
gb|AV935988.1|AV935988 AV935988 K. Sato unpublished cDNA li... 112 9e-043
gb|BJ547998.1|BJ547998 BJ547998 K. Sato unpublished cDNA li... 112 9e-043
gb|BG299804.2|BG299804 HVSMEa0021O04f Hordeum vulgare seedl... 172 2e-042
gb|BI953138.1|BI953138 HVSMEm0011D12f Hordeum vulgare green... 172 3e-042
gb|BE216017.1|BE216017 HV_CEb0009C05f Hordeum vulgare seedl... 172 3e-042
gb|AV924773.1|AV924773 AV924773 K. Sato unpublished cDNA li... 172 3e-042
gb|AV926646.1|AV926646 AV926646 K. Sato unpublished cDNA li... 172 3e-042
gb|AV933046.1|AV933046 AV933046 K. Sato unpublished cDNA li... 172 3e-042
gb|AV934138.1|AV934138 AV934138 K. Sato unpublished cDNA li... 172 3e-042
gb|BJ547042.1|BJ547042 BJ547042 K. Sato unpublished cDNA li... 172 3e-042
gb|BJ547507.1|BJ547507 BJ547507 K. Sato unpublished cDNA li... 172 3e-042
gb|BJ547685.1|BJ547685 BJ547685 K. Sato unpublished cDNA li... 172 3e-042
gb|BJ547768.1|BJ547768 BJ547768 K. Sato unpublished cDNA li... 172 3e-042
gb|BJ547797.1|BJ547797 BJ547797 K. Sato unpublished cDNA li... 172 3e-042
gb|BJ547881.1|BJ547881 BJ547881 K. Sato unpublished cDNA li... 172 3e-042
gb|CA022668.1|CA022668 HZ44A05r HZ Hordeum vulgare subsp. v... 123 3e-042
gb|BF623987.2|BF623987 HVSMEa0008F14f Hordeum vulgare seedl... 91 3e-042
gb|BJ548529.1|BJ548529 BJ548529 K. Sato unpublished cDNA li... 110 3e-042
gb|BJ548320.1|BJ548320 BJ548320 K. Sato unpublished cDNA li... 110 3e-042
gb|AV927871.1|AV927871 AV927871 K. Sato unpublished cDNA li... 110 3e-042
gb|BI949614.1|BI949614 HVSMEl0014O15f Hordeum vulgare spike... 171 3e-042
gb|BG342989.2|BG342989 HVSMEg0001J14f Hordeum vulgare pre-a... 171 3e-042
gb|AL504826.1|AL504826 AL504826 Hordeum vulgare Barke roots... 171 7e-042
gb|BJ548174.1|BJ548174 BJ548174 K. Sato unpublished cDNA li... 108 1e-041
gb|BJ548536.1|BJ548536 BJ548536 K. Sato unpublished cDNA li... 108 1e-041
gb|AV937000.1|AV937000 AV937000 K. Sato unpublished cDNA li... 108 1e-041
gb|BF624808.3|BF624808 HVSMEa0017M20f Hordeum vulgare seedl... 108 1e-041
gb|AV923424.1|AV923424 AV923424 K. Sato unpublished cDNA li... 170 1e-041
gb|BI953646.1|BI953646 HVSMEm0013K24f Hordeum vulgare green... 169 2e-041
gb|BI948082.1|BI948082 HVSMEl0008C04f Hordeum vulgare spike... 169 2e-041
gb|BI949114.1|BI949114 HVSMEl0012G22f Hordeum vulgare spike... 169 2e-041
gb|AV926802.1|AV926802 AV926802 K. Sato unpublished cDNA li... 169 2e-041
gb|BJ469586.1|BJ469586 BJ469586 K. Sato unpublished cDNA li... 169 2e-041
gb|BI778185.2|BI778185 EBro07_SQ002_H11_R root, 3 week, red... 169 2e-041
gb|BJ546871.1|BJ546871 BJ546871 K. Sato unpublished cDNA li... 169 2e-041
gb|BJ547290.1|BJ547290 BJ547290 K. Sato unpublished cDNA li... 169 2e-041
gb|BG299996.1|BG299996 HVSMEa0022O20f Hordeum vulgare seedl... 168 3e-041
gb|BG368482.1|BG368482 HVSMEi0019D10f Hordeum vulgare 20 DA... 168 3e-041
gb|AV929870.1|AV929870 AV929870 K. Sato unpublished cDNA li... 106 4e-041
gb|CA012539.1|CA012539 HT05L11r HT Hordeum vulgare subsp. v... 160 4e-041
gb|BQ465287.1|BQ465287 HU03D01r HU Hordeum vulgare subsp. v... 160 5e-041
gb|BF625851.2|BF625851 HVSMEa0013N14f Hordeum vulgare seedl... 108 6e-041
gb|BM375338.2|BM375338 EBem06_SQ003_A18_R embryo, 21 DPA, n... 123 7e-041
gb|BF263502.3|BF263502 HV_CEa0006O15f Hordeum vulgare seedl... 162 1e-040
gb|AV923513.1|AV923513 AV923513 K. Sato unpublished cDNA li... 166 2e-040
gb|BJ546949.1|BJ546949 BJ546949 K. Sato unpublished cDNA li... 166 2e-040
gb|BJ547269.1|BJ547269 BJ547269 K. Sato unpublished cDNA li... 166 2e-040
gb|BJ547528.1|BJ547528 BJ547528 K. Sato unpublished cDNA li... 166 2e-040
gb|BJ547611.1|BJ547611 BJ547611 K. Sato unpublished cDNA li... 166 2e-040
gb|BJ547661.1|BJ547661 BJ547661 K. Sato unpublished cDNA li... 166 2e-040
gb|BI948427.1|BI948427 HVSMEl0009I08f Hordeum vulgare spike... 159 2e-040
gb|BE214207.2|BE214207 HV_CEb0002K18f Hordeum vulgare seedl... 123 3e-040
gb|BG299389.1|BG299389 HVSMEa0019L19f Hordeum vulgare seedl... 119 9e-040
gb|BI950533.1|BI950533 HVSMEl0021D14f Hordeum vulgare spike... 154 1e-039
gb|BF255671.2|BF255671 HVSMEf0007H20f Hordeum vulgare seedl... 163 1e-039
gb|CA027071.1|CA027071 HZ57M23r HZ Hordeum vulgare subsp. v... 97 1e-039
gb|BQ767689.1|BQ767689 EBro08_SQ009_H13_R root, 3 week, dro... 134 1e-039
gb|AV918927.1|AV918927 AV918927 K. Sato unpublished cDNA li... 115 2e-039
gb|BI952081.1|BI952081 HVSMEm0004I21f Hordeum vulgare green... 162 2e-039
gb|AV925064.1|AV925064 AV925064 K. Sato unpublished cDNA li... 161 4e-039
gb|AV926037.1|AV926037 AV926037 K. Sato unpublished cDNA li... 161 4e-039
gb|AV933552.1|AV933552 AV933552 K. Sato unpublished cDNA li... 161 4e-039
gb|AV934268.1|AV934268 AV934268 K. Sato unpublished cDNA li... 161 4e-039
gb|CA006848.1|CA006848 HU05N24r HU Hordeum vulgare subsp. v... 133 4e-039
gb|BE214393.3|BE214393 HV_CEb0003F04f Hordeum vulgare seedl... 144 5e-039
gb|AV924070.1|AV924070 AV924070 K. Sato unpublished cDNA li... 156 6e-039
gb|BI949438.1|BI949438 HVSMEl0013O11f Hordeum vulgare spike... 102 8e-039
gb|BF623386.2|BF623386 HVSMEa0016I09f Hordeum vulgare seedl... 160 1e-038
gb|BF257698.2|BF257698 HVSMEf0013K02f Hordeum vulgare seedl... 160 1e-038
gb|CA017465.1|CA017465 HV05E15r HV Hordeum vulgare subsp. v... 160 1e-038
gb|CA017476.1|CA017476 HV05F04r HV Hordeum vulgare subsp. v... 160 1e-038
gb|CA019652.1|CA019652 HV12K19r HV Hordeum vulgare subsp. v... 160 1e-038
gb|AL503233.1|AL503233 AL503233 Hordeum vulgare Barke roots... 101 1e-038
gb|BI954877.1|BI954877 HVSMEm0020D03f Hordeum vulgare green... 91 5e-038
gb|BI953615.1|BI953615 HVSMEm0013J07f Hordeum vulgare green... 92 1e-037
gb|BF622044.2|BF622044 HVSMEa0001J20f Hordeum vulgare seedl... 156 1e-037
gb|BI949705.1|BI949705 HVSMEl0015H08f Hordeum vulgare spike... 124 1e-037
gb|CA007742.1|CA007742 HU08O02r HU Hordeum vulgare subsp. v... 156 2e-037
gb|AJ435107.1|AJ435107 AJ435107 S00002 Hordeum vulgare subs... 155 2e-037
gb|BF267193.3|BF267193 HV_CEa0017D12f Hordeum vulgare seedl... 154 6e-037
gb|BJ548976.1|BJ548976 BJ548976 K. Sato unpublished cDNA li... 92 9e-037
gb|AV936756.1|AV936756 AV936756 K. Sato unpublished cDNA li... 92 9e-037
gb|BF259078.2|BF259078 HVSMEf0017J19f Hordeum vulgare seedl... 98 9e-037
gb|CV058333.1|CV058333 BNEL36h8 Barley EST endosperm librar... 107 2e-036
gb|AV936609.1|AV936609 AV936609 K. Sato unpublished cDNA li... 82 2e-036
gb|AV931694.1|AV931694 AV931694 K. Sato unpublished cDNA li... 82 2e-036
gb|BJ548840.1|BJ548840 BJ548840 K. Sato unpublished cDNA li... 90 4e-036
gb|BQ471258.1|BQ471258 HV01N17T HV Hordeum vulgare subsp. v... 98 4e-036
gb|BI947656.1|BI947656 HVSMEl0006E19f Hordeum vulgare spike... 79 8e-036
gb|BI952820.1|BI952820 HVSMEm0007N21f Hordeum vulgare green... 95 1e-035
gb|BE559055.2|BE559055 HV_CEb0022I16f Hordeum vulgare seedl... 149 2e-035
gb|BJ548881.1|BJ548881 BJ548881 K. Sato unpublished cDNA li... 88 2e-035
gb|BF623361.2|BF623361 HVSMEa0015I24f Hordeum vulgare seedl... 129 3e-035
gb|AV928806.1|AV928806 AV928806 K. Sato unpublished cDNA li... 82 3e-035
gb|BF065899.1|BF065899 HV_CEb0014E21f Hordeum vulgare seedl... 149 3e-035
gb|BF065922.1|BF065922 HV_CEb0014F21f Hordeum vulgare seedl... 149 3e-035
gb|BF065944.1|BF065944 HV_CEb0014G19f Hordeum vulgare seedl... 149 3e-035
gb|BF065968.1|BF065968 HV_CEb0014H19f Hordeum vulgare seedl... 149 3e-035
gb|BF065573.1|BF065573 HV_CEb0012M23f Hordeum vulgare seedl... 148 4e-035
gb|BE215757.1|BE215757 HV_CEb0008G14f Hordeum vulgare seedl... 148 5e-035
gb|BE216520.1|BE216520 HV_CEb0010L11f Hordeum vulgare seedl... 148 5e-035
gb|BF266117.2|BF266117 HV_CEa0014D16f Hordeum vulgare seedl... 148 5e-035
gb|BF267384.2|BF267384 HV_CEa0017M06f Hordeum vulgare seedl... 148 5e-035
gb|BJ547972.1|BJ547972 BJ547972 K. Sato unpublished cDNA li... 86 5e-035
gb|BF065604.1|BF065604 HV_CEb0012O15f Hordeum vulgare seedl... 147 1e-034
gb|AV932402.1|AV932402 AV932402 K. Sato unpublished cDNA li... 147 1e-034
gb|BF257083.2|BF257083 HVSMEf0011M23f Hordeum vulgare seedl... 108 1e-034
gb|BE411006.1|BE411006 ISC001.D03F990519 ITEC ISC Barley Le... 145 3e-034
gb|BF627874.2|BF627874 HVSMEb0006C01f Hordeum vulgare seedl... 117 5e-034
gb|BF626269.2|BF626269 HVSMEa0018D07f Hordeum vulgare seedl... 144 7e-034
gb|BF626393.3|BF626393 HVSMEa0018A21f Hordeum vulgare seedl... 144 7e-034
gb|AV923925.1|AV923925 AV923925 K. Sato unpublished cDNA li... 144 7e-034
gb|BJ547072.1|BJ547072 BJ547072 K. Sato unpublished cDNA li... 144 7e-034
gb|BF260845.2|BF260845 HVSMEf0023B13f Hordeum vulgare seedl... 122 1e-033
gb|BJ547849.1|BJ547849 BJ547849 K. Sato unpublished cDNA li... 142 2e-033
gb|BF622486.2|BF622486 HVSMEa0004I15f Hordeum vulgare seedl... 102 3e-033
gb|BI960661.1|BI960661 HVSMEn0025K13f Hordeum vulgare rachi... 142 3e-033
gb|BJ546858.1|BJ546858 BJ546858 K. Sato unpublished cDNA li... 142 3e-033
gb|BJ547741.1|BJ547741 BJ547741 K. Sato unpublished cDNA li... 142 3e-033
gb|CA012898.1|CA012898 HT06M15r HT Hordeum vulgare subsp. v... 93 8e-033
gb|BF259240.3|BF259240 HVSMEf0018G18f Hordeum vulgare seedl... 123 2e-032
gb|BI947723.1|BI947723 HVSMEl0006J20f Hordeum vulgare spike... 100 3e-032
gb|BJ546968.1|BJ546968 BJ546968 K. Sato unpublished cDNA li... 138 3e-032
gb|BJ547144.1|BJ547144 BJ547144 K. Sato unpublished cDNA li... 138 3e-032
gb|BJ548020.1|BJ548020 BJ548020 K. Sato unpublished cDNA li... 82 5e-032
gb|BJ548533.1|BJ548533 BJ548533 K. Sato unpublished cDNA li... 82 5e-032
gb|AV931720.1|AV931720 AV931720 K. Sato unpublished cDNA li... 82 5e-032
gb|BJ548842.1|BJ548842 BJ548842 K. Sato unpublished cDNA li... 82 7e-032
gb|BJ546927.1|BJ546927 BJ546927 K. Sato unpublished cDNA li... 119 7e-032
gb|AV930169.1|AV930169 AV930169 K. Sato unpublished cDNA li... 82 9e-032
gb|BE214864.3|BE214864 HV_CEb0004O15f Hordeum vulgare seedl... 92 9e-032
gb|BJ548805.1|BJ548805 BJ548805 K. Sato unpublished cDNA li... 82 2e-031
gb|BF625840.2|BF625840 HVSMEa0013N01f Hordeum vulgare seedl... 135 3e-031
gb|BF260718.2|BF260718 HVSMEf0022M04f Hordeum vulgare seedl... 106 3e-031
gb|BI947132.1|BI947132 HVSMEl0003N16f Hordeum vulgare spike... 135 4e-031
gb|BI948019.1|BI948019 HVSMEl0007N21f Hordeum vulgare spike... 135 4e-031
gb|BE215347.2|BE215347 HV_CEb0006I19f Hordeum vulgare seedl... 134 5e-031
gb|CV060337.1|CV060337 BNEL57a4 Barley EST endosperm librar... 88 9e-031
gb|BF624576.2|BF624576 HVSMEa0017C18f Hordeum vulgare seedl... 133 1e-030
gb|BF624504.3|BF624504 HVSMEa0016N24f Hordeum vulgare seedl... 133 1e-030
gb|BF622296.2|BF622296 HVSMEa0002K01f Hordeum vulgare seedl... 89 1e-030
gb|AV922724.1|AV922724 AV922724 K. Sato unpublished cDNA li... 133 2e-030
gb|CA018522.1|CA018522 HV08O01r HV Hordeum vulgare subsp. v... 82 6e-030
gb|CA014271.1|CA014271 HT10O05r HT Hordeum vulgare subsp. v... 66 7e-030
gb|CA014093.1|CA014093 HT10F20r HT Hordeum vulgare subsp. v... 66 7e-030
gb|CA014392.1|CA014392 HT11D14r HT Hordeum vulgare subsp. v... 66 7e-030
gb|BQ464763.1|BQ464763 HU01G03T HU Hordeum vulgare subsp. v... 66 7e-030
gb|CA013624.1|CA013624 HT09A14r HT Hordeum vulgare subsp. v... 66 7e-030
gb|CA015258.1|CA015258 HT13M04r HT Hordeum vulgare subsp. v... 66 7e-030
gb|CA015289.1|CA015289 HT13N17r HT Hordeum vulgare subsp. v... 66 7e-030
gb|CA015590.1|CA015590 HT14M12r HT Hordeum vulgare subsp. v... 66 7e-030
gb|CA015381.1|CA015381 HT14C07r HT Hordeum vulgare subsp. v... 66 7e-030
gb|BF623684.2|BF623684 HVSMEa0003M02f Hordeum vulgare seedl... 66 7e-030
gb|CA004080.1|CA004080 HS16H17r HS Hordeum vulgare subsp. v... 66 7e-030
gb|AL500273.1|AL500273 AL500273 Hordeum vulgare Barke etiol... 85 9e-030
gb|CA003018.1|CA003018 HS09C19r HS Hordeum vulgare subsp. v... 129 2e-029
gb|BI948705.1|BI948705 HVSMEl0010J03f Hordeum vulgare spike... 66 3e-029
gb|BM375129.2|BM375129 EBem06_SQ002_H03_R embryo, 21 DPA, n... 128 4e-029
gb|AF109194.1|AF109194 Hordeum vulgare glutathione-S-transf... 68 4e-029
gb|BE196654.3|BE196654 HVSMEh0092O09f Hordeum vulgare 5-45 ... 68 4e-029
gb|BF620788.2|BF620788 HVSMEc0020N16f Hordeum vulgare seedl... 68 4e-029
gb|BE558770.2|BE558770 HV_CEb0020E13f Hordeum vulgare seedl... 68 4e-029
gb|CK122333.1|CK122333 BES1824102o06 BES1824 Hordeum vulgar... 68 4e-029
gb|BI959586.1|BI959586 HVSMEn0020E21f Hordeum vulgare rachi... 68 4e-029
gb|BF619549.2|BF619549 HVSMEc0004A15f Hordeum vulgare seedl... 68 5e-029
gb|CA028145.1|CA028145 HZ61C04r HZ Hordeum vulgare subsp. v... 68 5e-029
gb|CA024893.1|CA024893 HZ50K02r HZ Hordeum vulgare subsp. v... 68 5e-029
gb|BQ460114.1|BQ460114 HA07C20r HA Hordeum vulgare subsp. v... 68 5e-029
gb|CA012182.1|CA012182 HT04L19r HT Hordeum vulgare subsp. v... 68 5e-029
gb|CA001613.1|CA001613 HS05B06r HS Hordeum vulgare subsp. v... 68 5e-029
gb|BQ467510.1|BQ467510 HS04A05r HS Hordeum vulgare subsp. v... 68 5e-029
gb|BF625649.2|BF625649 HVSMEa0013B21f Hordeum vulgare seedl... 68 5e-029
gb|BQ467646.1|BQ467646 HS04G23r HS Hordeum vulgare subsp. v... 68 5e-029
gb|CA029484.1|CA029484 HZ65F17r HZ Hordeum vulgare subsp. v... 68 5e-029
gb|BQ765092.1|BQ765092 EBca01_SQ005_D19_R carpel, pre-anthe... 68 5e-029
gb|BI776549.2|BI776549 EBpi05_SQ001_N14_R pistil, 8 DPA, no... 68 5e-029
gb|CA001781.1|CA001781 HS05J03r HS Hordeum vulgare subsp. v... 68 5e-029
gb|CA023217.1|CA023217 HZ45J07r HZ Hordeum vulgare subsp. v... 68 5e-029
gb|BJ471554.1|BJ471554 BJ471554 K. Sato unpublished cDNA li... 68 1e-028
gb|BF623515.3|BF623515 HVSMEa0002H21f Hordeum vulgare seedl... 87 1e-028
gb|BF619363.2|BF619363 HVSMEc0016M05f Hordeum vulgare seedl... 68 2e-028
gb|BM442945.2|BM442945 EBro02_SQ001_P16_R root, 3 week, hyd... 126 2e-028
gb|BI949974.1|BI949974 HVSMEl0017G12f Hordeum vulgare spike... 66 2e-028
gb|BM369749.2|BM369749 EBem07_SQ004_H24_R embryo, 28 DPA, n... 68 3e-028
gb|BQ664112.1|BQ664112 HV01N17w HV Hordeum vulgare subsp. v... 125 3e-028
gb|AV928835.1|AV928835 AV928835 K. Sato unpublished cDNA li... 82 7e-028
gb|AV936523.1|AV936523 AV936523 K. Sato unpublished cDNA li... 82 7e-028
gb|AJ435050.1|AJ435050 AJ435050 S00002 Hordeum vulgare subs... 124 8e-028
gb|BE216067.2|BE216067 HV_CEb0009E21f Hordeum vulgare seedl... 79 8e-028
gb|CA012122.1|CA012122 HT04I07r HT Hordeum vulgare subsp. v... 99 8e-028
gb|BU998635.1|BU998635 HI11L03r HI Hordeum vulgare subsp. v... 102 9e-028
gb|CA004877.1|CA004877 HS18P04r HS Hordeum vulgare subsp. v... 107 9e-028
gb|BF258960.3|BF258960 HVSMEf0017C18f Hordeum vulgare seedl... 118 1e-027
gb|CA027668.1|CA027668 HZ59K12r HZ Hordeum vulgare subsp. v... 65 1e-027
gb|BF267015.2|BF267015 HV_CEa0016L05f Hordeum vulgare seedl... 75 2e-027
gb|BF265689.1|BF265689 HV_CEa0013B06f Hordeum vulgare seedl... 68 2e-027
gb|BF255920.2|BF255920 HVSMEf0008D10f Hordeum vulgare seedl... 93 2e-027
gb|BF261927.2|BF261927 HV_CEa0002J15f Hordeum vulgare seedl... 102 3e-027
gb|CV058068.1|CV058068 BNEL34a12 Barley EST endosperm libra... 103 3e-027
gb|AV932609.1|AV932609 AV932609 K. Sato unpublished cDNA li... 68 3e-027
gb|BF625356.2|BF625356 HVSMEa0008J19f Hordeum vulgare seedl... 104 3e-027
gb|BJ546861.1|BJ546861 BJ546861 K. Sato unpublished cDNA li... 122 4e-027
gb|BJ547544.1|BJ547544 BJ547544 K. Sato unpublished cDNA li... 122 4e-027
gb|AV926829.1|AV926829 AV926829 K. Sato unpublished cDNA li... 119 2e-026
gb|AV933636.1|AV933636 AV933636 K. Sato unpublished cDNA li... 119 2e-026
gb|BJ546903.1|BJ546903 BJ546903 K. Sato unpublished cDNA li... 119 2e-026
gb|BJ547398.1|BJ547398 BJ547398 K. Sato unpublished cDNA li... 119 2e-026
gb|BJ547767.1|BJ547767 BJ547767 K. Sato unpublished cDNA li... 119 2e-026
gb|BI947729.1|BI947729 HVSMEl0006K08f Hordeum vulgare spike... 119 3e-026
gb|BE602348.2|BE602348 HVSMEh0098J09f Hordeum vulgare 5-45 ... 118 5e-026
gb|CA004703.1|CA004703 HS18G22r HS Hordeum vulgare subsp. v... 118 5e-026
gb|BI955294.1|BI955294 HVSMEm0022F18f Hordeum vulgare green... 76 5e-026
gb|BF623533.3|BF623533 HVSMEa0002J15f Hordeum vulgare seedl... 117 7e-026
gb|BF628237.2|BF628237 HVSMEb0003H24f Hordeum vulgare seedl... 117 7e-026
gb|BI946932.1|BI946932 HVSMEl0002N24f Hordeum vulgare spike... 117 7e-026
gb|BE214034.1|BE214034 HV_CEb0001P12f Hordeum vulgare seedl... 117 7e-026
gb|BE215069.1|BE215069 HV_CEb0005L08f Hordeum vulgare seedl... 117 7e-026
gb|BF630948.3|BF630948 HVSMEb0014I05f Hordeum vulgare seedl... 117 7e-026
gb|BQ740072.1|BQ740072 HC04F04 HC Hordeum vulgare subsp. vu... 117 7e-026
gb|BJ547109.1|BJ547109 BJ547109 K. Sato unpublished cDNA li... 117 7e-026
gb|BG415059.1|BG415059 HVSMEk0004P20f Hordeum vulgare testa... 117 9e-026
gb|BF255189.1|BF255189 HVSMEf0006D04f Hordeum vulgare seedl... 97 1e-025
gb|AL450842.1|AL450842 AL450842 Hordeum vulgare Barke etiol... 89 1e-025
gb|BQ766061.1|BQ766061 EBro03_SQ008_N21_R root, 3 week, wat... 71 1e-025
gb|BE216829.1|BE216829 HV_CEb0011L16f Hordeum vulgare seedl... 116 2e-025
gb|CA003236.1|CA003236 HS09N04r HS Hordeum vulgare subsp. v... 76 3e-025
gb|CA027026.1|CA027026 HZ57K21r HZ Hordeum vulgare subsp. v... 68 4e-025
gb|BE196145.3|BE196145 HVSMEh0091H19f Hordeum vulgare 5-45 ... 68 5e-025
gb|BF253897.2|BF253897 HVSMEf0002G20f Hordeum vulgare seedl... 114 6e-025
gb|BF622298.2|BF622298 HVSMEa0002K03f Hordeum vulgare seedl... 89 9e-025
gb|BF256380.2|BF256380 HVSMEf0009H03f Hordeum vulgare seedl... 113 2e-024
gb|BI950563.1|BI950563 HVSMEl0021F15f Hordeum vulgare spike... 79 2e-024
gb|BF268066.2|BF268066 HV_CEa0019M05f Hordeum vulgare seedl... 65 2e-024
gb|BQ466475.1|BQ466475 HT02K07r HT Hordeum vulgare subsp. v... 66 4e-024
gb|BI948891.1|BI948891 HVSMEl0011E18f Hordeum vulgare spike... 110 1e-023
gb|BJ548395.1|BJ548395 BJ548395 K. Sato unpublished cDNA li... 82 1e-023
gb|BQ466342.1|BQ466342 HT02E05r HT Hordeum vulgare subsp. v... 66 2e-023
gb|BQ466550.1|BQ466550 HT02N19r HT Hordeum vulgare subsp. v... 66 2e-023
gb|BF259824.3|BF259824 HVSMEf0020F20f Hordeum vulgare seedl... 67 2e-023
gb|BF626467.2|BF626467 HVSMEa0018H19f Hordeum vulgare seedl... 109 3e-023
gb|BF622945.3|BF622945 HVSMEa0012E03f Hordeum vulgare seedl... 109 3e-023
gb|BI949279.1|BI949279 HVSMEl0013C05f Hordeum vulgare spike... 109 3e-023
gb|AV931548.1|AV931548 AV931548 K. Sato unpublished cDNA li... 82 3e-023
gb|BJ545696.1|BJ545696 BJ545696 K. Sato unpublished cDNA li... 108 5e-023
gb|BJ546043.1|BJ546043 BJ546043 K. Sato unpublished cDNA li... 108 5e-023
gb|CA017560.1|CA017560 HV05I24r HV Hordeum vulgare subsp. v... 107 7e-023
gb|CA004785.1|CA004785 HS18K23r HS Hordeum vulgare subsp. v... 66 1e-022
gb|BF253803.2|BF253803 HVSMEf0002C17f Hordeum vulgare seedl... 106 1e-022
gb|BF253797.2|BF253797 HVSMEf0002C11f Hordeum vulgare seedl... 106 2e-022
gb|BF253911.2|BF253911 HVSMEf0002H13f Hordeum vulgare seedl... 105 3e-022
gb|BF255868.2|BF255868 HVSMEf0008A20f Hordeum vulgare seedl... 58 3e-022
gb|BI777370.2|BI777370 EBro04_SQ001_A06_R root, 3 week, sal... 65 3e-022
gb|BM442923.2|BM442923 EBro02_SQ001_N17_R root, 3 week, hyd... 105 3e-022
gb|AV928913.1|AV928913 AV928913 K. Sato unpublished cDNA li... 82 5e-022
gb|BJ548091.1|BJ548091 BJ548091 K. Sato unpublished cDNA li... 82 5e-022
gb|BF622626.3|BF622626 HVSMEa0007G11f Hordeum vulgare seedl... 105 5e-022
gb|CA029001.1|CA029001 HZ63O10r HZ Hordeum vulgare subsp. v... 68 6e-022
gb|CA028873.1|CA028873 HZ63H22r HZ Hordeum vulgare subsp. v... 68 8e-022
gb|CA027925.1|CA027925 HZ60H09r HZ Hordeum vulgare subsp. v... 68 8e-022
gb|BF256426.3|BF256426 HVSMEf0009J14f Hordeum vulgare seedl... 99 9e-022
gb|BG415869.2|BG415869 HVSMEk0008G04f Hordeum vulgare testa... 104 9e-022
gb|CA025920.1|CA025920 HZ53I14r HZ Hordeum vulgare subsp. v... 68 2e-021
gb|AV935261.1|AV935261 AV935261 K. Sato unpublished cDNA li... 82 2e-021
gb|AV928909.1|AV928909 AV928909 K. Sato unpublished cDNA li... 82 2e-021
gb|BJ548951.1|BJ548951 BJ548951 K. Sato unpublished cDNA li... 82 2e-021
gb|BF624359.3|BF624359 HVSMEa0014E11f Hordeum vulgare seedl... 89 3e-021
gb|BF267688.2|BF267688 HV_CEa0018J20f Hordeum vulgare seedl... 58 7e-021
>gb|AL503324.1|AL503324 AL503324 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01K08T 5', mRNA sequence
Length = 700
Score = 272 bits (589), Expect = 2e-072
Identities = 111/215 (51%), Positives = 141/215 (65%)
Frame = +3 / +2
Query: 48 GKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHG 227
G++L LLG WASPFV R ++ALSLKGL++ EE+L +KSELLLSSNPV KKVPVL+H+G
Sbjct: 53 GEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNG 232
Query: 228 KPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXX 407
KPVCES II+QY+DEAF P+ LPSDPY RA+ARFWA+Y+DDK + W+ RG+T
Sbjct: 233 KPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWVQATRGKTEE 412
Query: 408 XXXXXXXXXXXXXXTLEQAFRECSKGKAFFXXXXXXXXXXXXXXXXXWLYATEAICGVKA 587
LE A RECSKG+ +F WL ATE + G K
Sbjct: 413 EKSEGINQTFAAVEMLEGALRECSKGEGYFGGETVGLVDVSLGSLLSWLNATEVMSGTKI 592
Query: 588 LDAGRTPLLAAWAERFCALEGVKGLIPDVDRLLEY 692
D +TPLLAAW +RF L+ K +P+VDR++E+
Sbjct: 593 FDPVKTPLLAAWMDRFSELDAAKAALPEVDRVVEF 697
Score = 66.6 bits (139), Expect(3) = 9e-025
Identities = 36/65 (55%), Positives = 39/65 (60%)
Frame = -2 / -2
Query: 394 PLNTGIHAL*NLSST*EAQKRAMARS*GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWM 215
PL H +LSS * AQKRA AR *GS+GR+ G ASS Y MI DS TG P
Sbjct: 399 PLVA*THGATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*T 220
Query: 214 STGTF 200
STGTF
Sbjct: 219 STGTF 205
Score = 50.1 bits (103), Expect(3) = 9e-025
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = -2 / -2
Query: 688 SRSLSTSGISPLTPSSAQNRSAHAASSGVLPASRAFTPQMASVAY 554
S +LSTSG + L SS+ RS HAA SGVL S+ P + SVA+
Sbjct: 693 STTLSTSGNAALAASSSLKRSIHAAKSGVLTGSKILVPDITSVAF 559
Score = 38.2 bits (77), Expect(3) = 9e-025
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = -2 / -2
Query: 130 VRPLRLSAMRARSTNGLAHNPSSVSSFPAMLAS*LL 23
+RPLRLSA TNGLA PSS S P + S L+
Sbjct: 135 LRPLRLSASFTLVTNGLAQAPSSFRSSPPAMVSCLI 28
>gb|BF621550.2|BF621550 HVSMEa0011F24f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011F24f, mRNA sequence
Length = 808
Score = 271 bits (586), Expect = 4e-072
Identities = 112/221 (50%), Positives = 142/221 (64%)
Frame = +3 / +2
Query: 48 GKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHG 227
G++L LLG WASPFV R ++ALSLKGL++ EE+L +KSELLLSSNPV KKVPVL+H+G
Sbjct: 71 GEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNG 250
Query: 228 KPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXX 407
KPVCES II+QY+DEAF P+ LPSDPY RA+ARFWA+Y+DDK + W+ RG+T
Sbjct: 251 KPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWVQATRGKTEE 430
Query: 408 XXXXXXXXXXXXXXTLEQAFRECSKGKAFFXXXXXXXXXXXXXXXXXWLYATEAICGVKA 587
LE A RECSKG+ +F WL ATE + G K
Sbjct: 431 EKSEGINQTFAAVEMLEGALRECSKGEGYFGGETVGLVDVSLGSLLSWLNATEVMSGTKI 610
Query: 588 LDAGRTPLLAAWAERFCALEGVKGLIPDVDRLLEYTKARRA 710
D +TPLLAAW +R L+ K +P+VDR++E+ R A
Sbjct: 611 FDPVKTPLLAAWMDRXSELDAAKAALPEVDRVVEFAIKRAA 733
Score = 66.6 bits (139), Expect(3) = 2e-025
Identities = 36/65 (55%), Positives = 39/65 (60%)
Frame = -2 / -2
Query: 394 PLNTGIHAL*NLSST*EAQKRAMARS*GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWM 215
PL H +LSS * AQKRA AR *GS+GR+ G ASS Y MI DS TG P
Sbjct: 417 PLVA*THGATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*T 238
Query: 214 STGTF 200
STGTF
Sbjct: 237 STGTF 223
Score = 52.4 bits (108), Expect(3) = 2e-025
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = -2 / -2
Query: 709 ARLALVYSRSLSTSGISPLTPSSAQNRSAHAASSGVLPASRAFTPQMASVAY 554
A L + S +LSTSG + L SS+ RS HAA SGVL S+ P + SVA+
Sbjct: 732 AALLMANSTTLSTSGNAALAASSSLXRSIHAAKSGVLTGSKILVPDITSVAF 577
Score = 38.2 bits (77), Expect(3) = 2e-025
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = -2 / -2
Query: 130 VRPLRLSAMRARSTNGLAHNPSSVSSFPAMLAS*LL 23
+RPLRLSA TNGLA PSS S P + S L+
Sbjct: 153 LRPLRLSASFTLVTNGLAQAPSSFRSSPPAMVSCLI 46
>gb|BF066033.2|BF066033 HV_CEb0014K12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014K12f, mRNA sequence
Length = 966
Score = 182 bits (391), Expect(6) = 5e-071
Identities = 74/114 (64%), Positives = 87/114 (76%)
Frame = +3 / +3
Query: 156 DDKSELLLSSNPVLKKVPVLIHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIAR 335
D KS LLL+SNPV K+VPVLIH+GKPV ESQ+IVQYVDEAFPA++P FLPSDP++RA+AR
Sbjct: 147 DSKSPLLLASNPVHKRVPVLIHNGKPVPESQLIVQYVDEAFPASSPRFLPSDPHERAVAR 326
Query: 336 FWASYVDDKFYSAWIPVFRGRTXXXXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
FWASYVD + SAW+PV+ GRT TLE+AF ECSKGK FF
Sbjct: 327 FWASYVDGELLSAWLPVYGGRTGEERAQAAGRVGAALETLERAFGECSKGKGFF 488
Score = 100 bits (213), Expect(5) = 9e-045
Identities = 46/61 (75%), Positives = 48/61 (78%)
Frame = -2 / -3
Query: 385 TGIHAL*NLSST*EAQKRAMARS*GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTG 206
TG HAL + ST*EAQKRA ARS GS+GRK G AGKASSTYCTM DS TGLP WMSTG
Sbjct: 376 TGSHALSSSPST*EAQKRATARSCGSEGRKRGELAGKASSTYCTMSCDSGTGLPLWMSTG 197
Query: 205 T 203
T
Sbjct: 196 T 194
Score = 59.3 bits (123), Expect(6) = 5e-071
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +3 / +3
Query: 54 ELTLLGLWASPFVLRARIALSLKGLTYAYSEE 149
ELTL+G W+SPF LRAR AL+LKGL YAY EE
Sbjct: 39 ELTLVGYWSSPFALRARYALNLKGLPYAYVEE 134
Score = 52.4 bits (108), Expect(5) = 9e-045
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = -1 / -2
Query: 548 PNKAAEHDVDEPHAVPSEEGLPLGA 474
P KAAEHDV EPH VP+EE LPLGA
Sbjct: 539 PTKAAEHDVHEPHRVPAEEALPLGA 465
Score = 41.8 bits (85), Expect(5) = 9e-045
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = -2 / -3
Query: 139 YA*VRPLRLSAMRARSTNGLAHNPSSVSS 53
YA* RPLRL A RARS NGL P+SVSS
Sbjct: 124 YA*GRPLRLRA*RARSANGLDQ*PTSVSS 38
Score = 35.0 bits (70), Expect(6) = 5e-071
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3 / +3
Query: 627 ERFCALEGVKGLIPDVDRLLEYTKAR 704
ER AL GVKG +PD RLLEY R
Sbjct: 621 ERVRALHGVKGGMPDPQRLLEYNLMR 698
Score = 33.6 bits (67), Expect(5) = 9e-045
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -2 / -3
Query: 703 LALVYSRSLSTSGISPLTPSSAQNRS 626
L +YS SL SGI PLTP SA+ RS
Sbjct: 697 LMRLYSSSLCGSGIPPLTP*SARTRS 620
Score = 32.7 bits (65), Expect(6) = 5e-071
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1 / +1
Query: 502 GTAWGSSTSCSAALLG 549
GT WGS TSCSAA +G
Sbjct: 493 GTRWGSWTSCSAAFVG 540
Score = 29.5 bits (58), Expect(6) = 5e-071
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3 / +1
Query: 549 WLYATEAICGVKALDA 596
WL +EA+CGV+ LDA
Sbjct: 541 WLKTSEAMCGVRLLDA 588
Score = 25.8 bits (50), Expect(5) = 9e-045
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -1 / -1
Query: 596 GVEGLHPADGLGGVQPPNKA 537
GV+ H A GLG ++PP+++
Sbjct: 588 GVKQPHAAHGLGRLEPPDES 529
Score = 23.1 bits (44), Expect(6) = 5e-071
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 588 LDAGRTPLLAAWA 626
L TPLLAAWA
Sbjct: 581 LTPAATPLLAAWA 619
>gb|BF622215.3|BF622215 HVSMEa0002A20f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002A20f, mRNA sequence
Length = 846
Score = 256 bits (553), Expect = 1e-067
Identities = 106/203 (52%), Positives = 131/203 (64%)
Frame = +3 / +1
Query: 48 GKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHG 227
G++L LLG WASPFV R ++ALSLKGL++ EE+L +KSELLLSSNPV KKVPVL+H+G
Sbjct: 73 GEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNG 252
Query: 228 KPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXX 407
KPVCES II+QY+DEAF P+ LPSDPY RA+ARFWA+Y+DDK + W+ RG+T
Sbjct: 253 KPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWVQATRGKTEE 432
Query: 408 XXXXXXXXXXXXXXTLEQAFRECSKGKAFFXXXXXXXXXXXXXXXXXWLYATEAICGVKA 587
LE A RECSKG+ +F WL ATE + G K
Sbjct: 433 EKSEGINQTFAAVEMLEGALRECSKGEGYFGGETVGLVDVSLGSLLSWLNATEVMSGTKI 612
Query: 588 LDAGRTPLLAAWAERFCALEGVK 656
D +TPLLAAW +RF L+ K
Sbjct: 613 FDPVKTPLLAAWMDRFYQLDAAK 681
>gb|BF622224.2|BF622224 HVSMEa0002C05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002C05f, mRNA sequence
Length = 705
Score = 253 bits (547), Expect = 1e-066
Identities = 105/203 (51%), Positives = 130/203 (64%)
Frame = +3 / +1
Query: 48 GKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHG 227
G++L LLG WASPFV R ++ALSLKGL++ EE+L +KSELLLSSNPV KKVPVL+H+G
Sbjct: 70 GEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNG 249
Query: 228 KPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXX 407
KPVCES II+QY+DEAF P+ LPSDPY RA+ARFWA+Y+DDK + W+ RG+T
Sbjct: 250 KPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWVQATRGKTEE 429
Query: 408 XXXXXXXXXXXXXXTLEQAFRECSKGKAFFXXXXXXXXXXXXXXXXXWLYATEAICGVKA 587
LE A RECSKG+ +F WL ATE + G K
Sbjct: 430 EKSEGINQTFAAVEMLEGALRECSKGEGYFGGETVGLVDVSLGSLLSWLNATEVMSGTKI 609
Query: 588 LDAGRTPLLAAWAERFCALEGVK 656
D +TPLL AW +RF L+ K
Sbjct: 610 FDPVKTPLLPAWMDRFSELDASK 678
Score = 66.6 bits (139), Expect(3) = 7e-021
Identities = 36/65 (55%), Positives = 39/65 (60%)
Frame = -2 / -2
Query: 394 PLNTGIHAL*NLSST*EAQKRAMARS*GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWM 215
PL H +LSS * AQKRA AR *GS+GR+ G ASS Y MI DS TG P
Sbjct: 416 PLVA*THGATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*T 237
Query: 214 STGTF 200
STGTF
Sbjct: 236 STGTF 222
Score = 38.2 bits (77), Expect(3) = 7e-021
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = -2 / -2
Query: 130 VRPLRLSAMRARSTNGLAHNPSSVSSFPAMLAS*LL 23
+RPLRLSA TNGLA PSS S P + S L+
Sbjct: 152 LRPLRLSASFTLVTNGLAQAPSSFRSSPPAMVSCLI 45
Score = 36.8 bits (74), Expect(3) = 7e-021
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -2 / -2
Query: 655 LTPSSAQNRSAHAASSGVLPASRAFTPQMASVAY 554
L SS+ RS HA SGVL S+ P + SVA+
Sbjct: 677 LEASSSLKRSIHAGKSGVLTGSKILVPDITSVAF 576
>gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109B04_T3.ab1 similar to Glutathione
transferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 897
Score = 215 bits (463), Expect(3) = 4e-063
Identities = 86/159 (54%), Positives = 109/159 (68%)
Frame = +3 / +2
Query: 21 GSS*LASMAGKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLK 200
G +A+ G E+ LLG+WASPFV+RA++AL LKG+ Y Y EE L +KS+L L SNPV K
Sbjct: 80 GRKRMANRGGDEVKLLGMWASPFVVRAQLALRLKGVNYEYVEEELANKSDLFLRSNPVHK 259
Query: 201 KVPVLIHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWI 380
VPVLIH GKP+CESQ+I+QY+DEAF P+ LP+DPY+RA+ARFWA+YV+DK W
Sbjct: 260 TVPVLIHDGKPICESQVILQYIDEAFAGVGPSLLPADPYERAVARFWAAYVEDKLLPPWR 439
Query: 381 PVFRGRTXXXXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
VFR T TLE+ R+CS+GK FF
Sbjct: 440 KVFRVTTDEERAEWTRQTVAAVDTLEEGLRQCSEGKGFF 556
Score = 139 bits (299), Expect(2) = 4e-039
Identities = 73/159 (45%), Positives = 81/159 (50%)
Frame = -2 / -1
Query: 496 KKAFPLEHSLNXXXXXXXXXXXXXXXXXXXXXXLPLNTGIHAL*NLSST*EAQKRAMARS 317
K FP EH L + LNT +H +LSST* AQKRA ARS
Sbjct: 555 KNPFPSEHCLRPSSSVSTAATVCLVHSALSSSVVTLNTFLHGGSSLSST*AAQKRATARS 376
Query: 316 *GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTGTFXXXXXXXXXXXXXXXXXXSEY 137
*GS GR+ G KASS YC M WDSQ GLP WMSTGT S Y
Sbjct: 375 *GSAGRRDGPTPAKASSMYCRMTWDSQMGLPSWMSTGTVLCTGLERRKRSLLLASSSSTY 196
Query: 136 A*VRPLRLSAMRARSTNGLAHNPSSVSSFPAMLAS*LLP 20
+* PLR SA A +TNGLAH PSS +S P +LA LP
Sbjct: 195 S*FTPLRRSASCALTTNGLAHMPSSFTSSPPLLAILFLP 79
Score = 96.8 bits (205), Expect(2) = 3e-024
Identities = 42/70 (60%), Positives = 47/70 (67%)
Frame = +2 / +1
Query: 44 GRERAYAAGVMGEPVRAPGAHRAQPQRPHLRILRGEPRRQERASPQLQPRAQEGARAHPP 223
GR R AAG +GEPVR G RA PQ LR+ RG R+QER P LQP Q+G+RAHP
Sbjct: 103 GRRRGEAAGHVGEPVRGQGTARAPPQGRELRVRRGGARQQERPLPPLQPGTQDGSRAHPR 282
Query: 224 RQARLRVPDH 253
RQA LRVP H
Sbjct: 283 RQAHLRVPGH 312
Score = 41.8 bits (85), Expect(2) = 4e-039
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = -1 / -3
Query: 596 GVEGLHPADGLGGVQPPNKAAEHDVDEPHAVPSEEGLPLGA 474
GVE + LGG P + AE DVD P AV +EE LPL A
Sbjct: 655 GVEHPVTRELLGGAHPRHYTAEQDVDVPDAVAAEEPLPLRA 533
Score = 40.0 bits (81), Expect(3) = 4e-063
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3 / +2
Query: 549 WLYATEAICGVKALDAGRTPLLAAW 623
W+ ATE + G + DAG+ PLLAAW
Sbjct: 608 WVRATEKLSGDRVFDAGKAPLLAAW 682
Score = 37.7 bits (76), Expect(2) = 3e-024
Identities = 18/31 (58%), Positives = 19/31 (61%)
Frame = +1 / +3
Query: 505 TAWGSSTSCSAALLGGCTPPRPSAG*RPSTP 597
TA G+STSCSA GC PPR S STP
Sbjct: 564 TASGTSTSCSAV*CRGCAPPRSSLVTGCSTP 656
Score = 25.8 bits (50), Expect(3) = 4e-063
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3 / +3
Query: 633 FCALEGVKGLIPDVDRLLEYTK 698
F L+ K + DVDR++EY +
Sbjct: 693 FXELDAXKAVFQDVDRVVEYAR 758
>gb|BF264380.2|BF264380 HV_CEa0009E08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009E08f, mRNA sequence
Length = 848
Score = 140 bits (300), Expect(3) = 4e-063
Identities = 58/129 (44%), Positives = 71/129 (55%)
Frame = +3 / +3
Query: 285 AAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXXXXXXXXXXXXXXTLEQA 464
+ P LP DP+DRA+ARFWA+Y DD F+++WI F G T +E A
Sbjct: 276 SGPALLPGDPHDRAVARFWAAYADDHFFASWIKAFAGTTDDERAAATEAAAAALQKMEGA 455
Query: 465 FRECSKGKAFFXXXXXXXXXXXXXXXXXWLYATEAICGVKALDAGRTPLLAAWAERFCAL 644
F ECSKGKAFF W+ A +A+ GV LDA RTPLL AWAERF A
Sbjct: 456 FGECSKGKAFFGGDAPGYVDIALGGYVAWMRAFQAVGGVDLLDAARTPLLGAWAERFAAP 635
Query: 645 EGVKGLIPD 671
E KG +P+
Sbjct: 636 ESGKGGMPE 662
Score = 91.3 bits (193), Expect(3) = 4e-063
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3 / +3
Query: 132 YAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKPVCESQIIVQYVDEAFPAA 287
Y Y+EE+L KS+LLL+SNPV KVPVL+H GKPVCES +IVQY+DEAFP +
Sbjct: 117 YEYAEEDLTSKSDLLLASNPVHAKVPVLLHGGKPVCESMLIVQYLDEAFPGS 272
Score = 54.7 bits (113), Expect(4) = 8e-032
Identities = 29/69 (42%), Positives = 31/69 (44%)
Frame = -2 / -2
Query: 496 KKAFPLEHSLNXXXXXXXXXXXXXXXXXXXXXXLPLNTGIHAL*NLSST*EAQKRAMARS 317
KKA PLEHS N +P N IH SS * AQKRA ARS
Sbjct: 487 KKALPLEHSPNAPSIFCSAAAAASVAAALSSSVVPANALIHEAKKWSSA*AAQKRATARS 308
Query: 316 *GSDGRKLG 290
GS GR+ G
Sbjct: 307 WGSPGRRAG 281
Score = 52.4 bits (108), Expect(4) = 8e-032
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = -2 / -2
Query: 280 GKASSTYCTMIWDSQTGLPWWMSTGT 203
GKASS YCTM DSQTGLP W STGT
Sbjct: 265 GKASSRYCTMSMDSQTGLPPWRSTGT 188
Score = 49.2 bits (101), Expect(3) = 4e-063
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3 / +3
Query: 54 ELTLLGLWASPFVLRARIALSLKGLT 131
EL LLG WASPFV RAR+AL LKG+T
Sbjct: 36 ELKLLGFWASPFVHRARVALHLKGIT 113
Score = 44.6 bits (91), Expect(4) = 8e-032
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -2 / -2
Query: 130 VRPLRLSAMRARSTNGLAHNPSSVSS 53
V PLR SA RAR TNGLA NPSS+SS
Sbjct: 112 VIPLRCSATRARCTNGLAQNPSSLSS 35
Score = 40.9 bits (83), Expect(4) = 8e-032
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -1 / -1
Query: 596 GVEGLHPADGLGGVQPPNKAAEHDVDEPHAVPSEEGLPLGA 474
GV+ +HPA L P + + DV P V +EEGL LGA
Sbjct: 587 GVQEVHPAHRLERAHPRDVPTQRDVHVPRGVAAEEGLALGA 465
>gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0016G15f, mRNA sequence
Length = 830
Score = 196 bits (423), Expect(2) = 3e-062
Identities = 82/155 (52%), Positives = 101/155 (65%)
Frame = +3 / +1
Query: 33 LASMAGKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPV 212
+A E+ LLG+WASPFVLR ++ALSLKG+ Y Y EE+L KSELLL SNPVL+KVPV
Sbjct: 25 MAGGGNDEVKLLGMWASPFVLRIKLALSLKGVAYEYVEEDLKSKSELLLRSNPVLQKVPV 204
Query: 213 LIHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFR 392
LIH GKPV ES +I+QY+DEAF P+ LP +P+ RA+ARFWA+Y+D A
Sbjct: 205 LIHDGKPVSESSVILQYIDEAFAGVGPSLLPEEPHGRAVARFWAAYIDGTLVKASSEASM 384
Query: 393 GRTXXXXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
G+T TLE A R+CS GK FF
Sbjct: 385 GKTEEEKAEGAKQVAAAVETLEGALRDCSNGKPFF 489
Score = 123 bits (263), Expect(2) = 8e-036
Identities = 65/148 (43%), Positives = 72/148 (48%)
Frame = -2 / -1
Query: 496 KKAFPLEHSLNXXXXXXXXXXXXXXXXXXXXXXLPLNTGIHAL*NLSST*EAQKRAMARS 317
KK FPLE SL LP++ A ++ S * AQKRA AR
Sbjct: 488 KKGFPLEQSLRAPSRVSTAAATCFAPSAFSSSVLPIDASDDAFTSVPSM*AAQKRATARP 309
Query: 316 *GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTGTFXXXXXXXXXXXXXXXXXXSEY 137
GS GR G KASS YC M DS+TGLP WMSTGTF S Y
Sbjct: 308 WGSSGRSEGPTPAKASSMYCRMTDDSETGLPSWMSTGTFWSTGLDLRSSSLLLLRSSSTY 129
Query: 136 A*VRPLRLSAMRARSTNGLAHNPSSVSS 53
+* PLRLSA R TNGLAH PSS +S
Sbjct: 128 S*ATPLRLSASLIRRTNGLAHMPSSFTS 45
Score = 62.5 bits (130), Expect(2) = 3e-062
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +3 / +1
Query: 549 WLYATEAICGVKALDAGRTPLLAAWAERFCALEGVKGLIPDVDRLLEYTKARRA 710
W++ ++ + GVK D TPLLAAWA+ F +L V+ ++PDV +L+E+ A A
Sbjct: 541 WVHTSDKMKGVKTFDPATTPLLAAWADSFXSLGAVEAVMPDVSKLIEFAMAMHA 702
Score = 47.3 bits (97), Expect(2) = 8e-036
Identities = 25/74 (33%), Positives = 31/74 (41%)
Frame = -1 / -3
Query: 695 GILQKPVHVRDQPLDTXXXXXXXXXXXXXXXXAGVEGLHPADGLGGVQPPNKAAEHDVDE 516
G L + H+R LD GVE + GV P +AAEH V
Sbjct: 687 GKLDELAHIRHDRLDGAQRSEAVRPRSQERSRGGVERFDALHLIAGVHPREEAAEHHVHV 508
Query: 515 PHAVPSEEGLPLGA 474
P V +EEGLP+ A
Sbjct: 507 PRRVATEEGLPVRA 466
>gb|BF622265.2|BF622265 HVSMEa0002G13f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002G13f, mRNA sequence
Length = 698
Score = 237 bits (513), Expect = 5e-062
Identities = 106/223 (47%), Positives = 134/223 (60%)
Frame = +3 / +3
Query: 36 ASMAGKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVL 215
A A +L LLGL SPFV+R R+AL +KGL+Y Y E++L +KSELLL SNPV KKVPVL
Sbjct: 21 AMAAEGDLKLLGLSVSPFVVRVRMALHMKGLSYEYIEQDLFNKSELLLKSNPVEKKVPVL 200
Query: 216 IHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRG 395
IH GK + +S IVQY+DE + A P+ LP DPYDRA +RFWA+Y DDK +SA++ + R
Sbjct: 201 IHDGKTILDSSAIVQYIDEVWAAMGPSILPVDPYDRAASRFWAAYADDKLFSAYVGINRA 380
Query: 396 RTXXXXXXXXXXXXXXXXTLEQAFRECSKGKAFFXXXXXXXXXXXXXXXXXWLYATEAIC 575
T LE+AF + S GKAFF WL A +
Sbjct: 381 TTKVERAEKVSETVAVLERLEEAFAKQSNGKAFFAGDSVGYLDLAVGCHLHWLKAQRKMF 560
Query: 576 GVKALDAGRTPLLAAWAERFCALEGVKGLIPDVDRLLEYTKAR 704
GV L+AGRTPLL WA+RF + K ++PD D +EY K R
Sbjct: 561 GVVFLEAGRTPLLTGWAKRFAETDAGKEVVPDTDVGMEYAKKR 689
Score = 69.8 bits (146), Expect(3) = 3e-024
Identities = 34/55 (61%), Positives = 37/55 (67%)
Frame = -2 / -2
Query: 364 NLSST*EAQKRAMARS*GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTGTF 200
+LSS * AQKR ARS*GS GR G A + SS YCTM +S LP WMSTGTF
Sbjct: 349 SLSSA*AAQKREAARS*GSTGRIDGPMAAQTSSMYCTMADESSMVLPSWMSTGTF 185
Score = 42.8 bits (87), Expect(3) = 3e-024
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = -2 / -2
Query: 697 LVYSRSLSTSGISPLTPSSAQNRSAHAASSGVLPASRAFTPQMASVA 557
L YS S SG + L S + NR A SGVLPASR TP + A
Sbjct: 682 LAYSIPTSVSGTTSLPASVSANRFAQPVKSGVLPASRNTTPNILRCA 542
Score = 40.5 bits (82), Expect(3) = 3e-024
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -2 / -2
Query: 139 YA*VRPLRLSAMRARSTNGLAHNPSSVSSFPAMLA 35
Y+*+RP SAMR R+TNGL PS+ S A +A
Sbjct: 124 YS*LRPFMCSAMRTRTTNGLTDKPSNFRSPSAAIA 20
>gb|BJ547778.1|BJ547778 BJ547778 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal39b17 5', mRNA sequence
Length = 653
Score = 192 bits (413), Expect(2) = 8e-059
Identities = 77/148 (52%), Positives = 95/148 (64%)
Frame = +3 / +2
Query: 54 ELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKP 233
EL LLG W PF LR R+AL+ KGL+Y Y EE+L +KS+LLL SNPV KKVPVLIH+G P
Sbjct: 44 ELKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVP 223
Query: 234 VCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXX 413
+CES I++Y+DE + P LP DPY RA+ARFWA+Y+D + W +F G+T
Sbjct: 224 ICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEK 403
Query: 414 XXXXXXXXXXXXTLEQAFRECSKGKAFF 497
LE A RECS GK FF
Sbjct: 404 HEGTKQTLAAVEKLEVALRECSSGKPFF 487
Score = 96.4 bits (204), Expect(2) = 1e-024
Identities = 57/148 (38%), Positives = 62/148 (41%)
Frame = -2 / -3
Query: 496 KKAFPLEHSLNXXXXXXXXXXXXXXXXXXXXXXLPLNTGIHAL*NLSST*EAQKRAMARS 317
K FPLEHSL LP N H S * AQ RA AR
Sbjct: 486 KNGFPLEHSLRATSSFSTAASVCFVPSCFSLSVLPTNIFHHGATRF*SM*AAQNRATARW 307
Query: 316 *GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTGTFXXXXXXXXXXXXXXXXXXSEY 137
*GS G + G SS Y M DSQ G P WM TGTF S Y
Sbjct: 306 *GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFTGLDSRRRSLLLARSSSWY 127
Query: 136 A*VRPLRLSAMRARSTNGLAHNPSSVSS 53
+*++PL+LSA RS NG H P S SS
Sbjct: 126 S*LKPLKLSASLTRSANGPLHVPRSFSS 43
Score = 55.6 bits (115), Expect(2) = 8e-059
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +3 / +2
Query: 549 WLYATEAICGVKALDAGRTPLLAAWAERFCALEGVKGL 662
W+ TEA+CG++ LDA +TPLL AW ERF +E K +
Sbjct: 539 WMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAV 652
Score = 36.8 bits (74), Expect(2) = 1e-024
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -2 / -3
Query: 655 LTPSSAQNRSAHAASSGVLPASRAFTPQMASV 560
L S RS HA+S+GVL ASR+ PQ ASV
Sbjct: 645 LAGSIPPKRSIHASSNGVLVASRSSRPQSASV 550
>gb|BJ548902.1|BJ548902 BJ548902 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal39b17 3', mRNA sequence
Length = 736
Score = 165 bits (355), Expect(2) = 1e-058
Identities = 66/131 (50%), Positives = 84/131 (64%)
Frame = +3 / -1
Query: 105 IALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKPVCESQIIVQYVDEAFPA 284
+AL+ KGL+Y Y EE+L +KS+LLL SNPV KKVPVLIH+G P+CES I++Y+DE +
Sbjct: 736 LALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVPICESLAILEYIDEVYRG 557
Query: 285 AAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXXXXXXXXXXXXXXTLEQA 464
P LP DPY RA+ARFWA+Y+D + W +F G+T LE A
Sbjct: 556 TGPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVA 377
Query: 465 FRECSKGKAFF 497
RECS GK FF
Sbjct: 376 LRECSSGKPFF 344
Score = 81.7 bits (172), Expect(2) = 1e-058
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +3 / -1
Query: 549 WLYATEAICGVKALDAGRTPLLAAWAERFCALEGVKGLIPDVDRLLEYTKARRA 710
W+ TEA+CG++ LDA +TPLL AW ERF +E K ++PD+DRL+E+ K +RA
Sbjct: 292 WMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEFAKMKRA 131
Score = 79.9 bits (168), Expect(2) = 1e-023
Identities = 48/130 (36%), Positives = 53/130 (40%)
Frame = -2 / +3
Query: 496 KKAFPLEHSLNXXXXXXXXXXXXXXXXXXXXXXLPLNTGIHAL*NLSST*EAQKRAMARS 317
K FPLEHSL LP N H S * AQ RA AR
Sbjct: 345 KNGFPLEHSLRATSSFSTAASVCFVPSCFSLSVLPTNIFHHGATRF*SM*AAQNRATARW 524
Query: 316 *GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTGTFXXXXXXXXXXXXXXXXXXSEY 137
*GS G + G SS Y M DSQ G P WM TGTF S Y
Sbjct: 525 *GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFTGLDSRRRSLLLARSSSWY 704
Query: 136 A*VRPLRLSA 107
+*++PL+LSA
Sbjct: 705 S*LKPLKLSA 734
Score = 49.6 bits (102), Expect(2) = 1e-023
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = -2 / +3
Query: 709 ARLALVYSRSLSTSGISPLTPSSAQNRSAHAASSGVLPASRAFTPQMASV 560
AR L S +LS SG + L S RS HA+S+GVL ASR+ PQ ASV
Sbjct: 132 ARFILANSTNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASV 281
>gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l18 5', mRNA sequence
Length = 676
Score = 204 bits (441), Expect(2) = 2e-058
Identities = 83/148 (56%), Positives = 106/148 (71%)
Frame = +3 / +1
Query: 54 ELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKP 233
E LLG +ASPFV+RA++ALS KGL++ EE+L +KSELLL SNP KKVPVLIH+GKP
Sbjct: 94 EPKLLGTFASPFVMRAKLALSFKGLSFEDVEEDLANKSELLLESNPAQKKVPVLIHNGKP 273
Query: 234 VCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXX 413
VC+SQ+IVQY+DEAF + LP+DPY+RA+ARFWA+YVDDK ++W+ RG+T
Sbjct: 274 VCDSQVIVQYIDEAFSGNGTSLLPADPYERAVARFWAAYVDDKLLASWLQAARGKTEEEK 453
Query: 414 XXXXXXXXXXXXTLEQAFRECSKGKAFF 497
T+E AF+ CS GK FF
Sbjct: 454 AEGLKQTLVAVETMEAAFKACSNGKPFF 537
Score = 96.4 bits (204), Expect(2) = 2e-024
Identities = 50/99 (50%), Positives = 54/99 (54%)
Frame = -2 / -3
Query: 496 KKAFPLEHSLNXXXXXXXXXXXXXXXXXXXXXXLPLNTGIHAL*NLSST*EAQKRAMARS 317
KK FPLEH+L LPL +LSST* AQKRA ARS
Sbjct: 536 KKGFPLEHALKAASMVSTATSVCFSPSAFSSSVLPLAACSQDARSLSST*AAQKRATARS 357
Query: 316 *GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTGTF 200
*GS GR+ KASS YCTM +SQTGLP WMSTGTF
Sbjct: 356 *GSAGRRDVPLPLKASSMYCTMTCESQTGLPLWMSTGTF 240
Score = 41.4 bits (84), Expect(2) = 2e-058
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3 / +1
Query: 549 WLYATEAICGVKALDAGRTPLLAAWAERF 635
W++A A+ G++ D ++PLLAAW ERF
Sbjct: 589 WVHAGAALYGMRLFDDAKSPLLAAWVERF 675
Score = 36.3 bits (73), Expect(2) = 2e-024
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -2 / -3
Query: 130 VRPLRLSAMRARSTNGLAHNPSSVSS 53
++PL+LSA AR TNGLA+ PSS S
Sbjct: 170 LKPLKLSASFARMTNGLANVPSSFGS 93
>gb|BJ547635.1|BJ547635 BJ547635 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33l15 5', mRNA sequence
Length = 642
Score = 192 bits (413), Expect(2) = 3e-058
Identities = 77/148 (52%), Positives = 95/148 (64%)
Frame = +3 / +2
Query: 54 ELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKP 233
EL LLG W PF LR R+AL+ KGL+Y Y EE+L +KS+LLL SNPV KKVPVLIH+G P
Sbjct: 44 ELKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVP 223
Query: 234 VCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXX 413
+CES I++Y+DE + P LP DPY RA+ARFWA+Y+D + W +F G+T
Sbjct: 224 ICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEK 403
Query: 414 XXXXXXXXXXXXTLEQAFRECSKGKAFF 497
LE A RECS GK FF
Sbjct: 404 HEGTKQTLAAVEKLEVALRECSSGKPFF 487
Score = 96.4 bits (204), Expect(2) = 2e-024
Identities = 57/148 (38%), Positives = 62/148 (41%)
Frame = -2 / -1
Query: 496 KKAFPLEHSLNXXXXXXXXXXXXXXXXXXXXXXLPLNTGIHAL*NLSST*EAQKRAMARS 317
K FPLEHSL LP N H S * AQ RA AR
Sbjct: 486 KNGFPLEHSLRATSSFSTAASVCFVPSCFSLSVLPTNIFHHGATRF*SM*AAQNRATARW 307
Query: 316 *GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTGTFXXXXXXXXXXXXXXXXXXSEY 137
*GS G + G SS Y M DSQ G P WM TGTF S Y
Sbjct: 306 *GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFTGLDSRRRSLLLARSSSWY 127
Query: 136 A*VRPLRLSAMRARSTNGLAHNPSSVSS 53
+*++PL+LSA RS NG H P S SS
Sbjct: 126 S*LKPLKLSASLTRSANGPLHVPRSFSS 43
Score = 53.8 bits (111), Expect(2) = 3e-058
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3 / +2
Query: 549 WLYATEAICGVKALDAGRTPLLAAWAERFCALE 647
W+ TEA+CG++ LDA +TPLL AW ERF +E
Sbjct: 539 WMQGTEALCGLELLDATKTPLLLAWMERFGGME 637
Score = 35.9 bits (72), Expect(2) = 2e-024
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -1
Query: 631 RSAHAASSGVLPASRAFTPQMASV 560
RS HA+S+GVL ASR+ PQ ASV
Sbjct: 621 RSIHASSNGVLVASRSSRPQSASV 550
>gb|BF629286.3|BF629286 HVSMEb0010K15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010K15f, mRNA sequence
Length = 749
Score = 218 bits (470), Expect(2) = 1e-057
Identities = 88/150 (58%), Positives = 108/150 (72%)
Frame = +3 / +1
Query: 48 GKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHG 227
G++L LLG WASPFV R ++ALSLKGL++ EE+L +KSELLLSSNPV KKVPVL+H+G
Sbjct: 73 GEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNG 252
Query: 228 KPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXX 407
KPVCES II+QY+DEAF P+ LPSDPY RA+ARFWA+Y+DDK + W+ RG+T
Sbjct: 253 KPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWVQATRGKTEE 432
Query: 408 XXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
LE A RECSKGK +F
Sbjct: 433 EKSEGINQTFAAVEMLEGALRECSKGKGYF 522
Score = 25.4 bits (49), Expect(2) = 1e-057
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 615 AAWAERFCALEGVKGLIP 668
AAW +RF L+ KG +P
Sbjct: 643 AAWMDRFNELDAAKGGLP 696
>gb|AV933203.1|AV933203 AV933203 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5m21 5', mRNA sequence
Length = 640
Score = 189 bits (408), Expect(2) = 1e-057
Identities = 76/147 (51%), Positives = 94/147 (63%)
Frame = +3 / +1
Query: 57 LTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKPV 236
L LLG W PF LR R+AL+ KGL+Y Y EE+L +KS+LLL SNPV KKVPVLIH+G P+
Sbjct: 49 LKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVPI 228
Query: 237 CESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXXX 416
CES I++Y+DE + P LP DPY RA+ARFWA+Y+D + W +F G+T
Sbjct: 229 CESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKH 408
Query: 417 XXXXXXXXXXXTLEQAFRECSKGKAFF 497
LE A RECS GK FF
Sbjct: 409 EGTKQTLAAVEKLEVALRECSSGKPFF 489
Score = 93.2 bits (197), Expect(2) = 2e-023
Identities = 55/145 (37%), Positives = 60/145 (41%)
Frame = -2 / -3
Query: 496 KKAFPLEHSLNXXXXXXXXXXXXXXXXXXXXXXLPLNTGIHAL*NLSST*EAQKRAMARS 317
K FPLEHSL LP N H S * AQ RA AR
Sbjct: 488 KNGFPLEHSLRATSSFSTAASVCFVPSCFSLSVLPTNIFHHGATRF*SM*AAQNRATARW 309
Query: 316 *GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTGTFXXXXXXXXXXXXXXXXXXSEY 137
*GS G + G SS Y M DSQ G P WM TGTF S Y
Sbjct: 308 *GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFTGLDSRRRSLLLARSSSWY 129
Query: 136 A*VRPLRLSAMRARSTNGLAHNPSS 62
+*++PL+LSA RS NG H P S
Sbjct: 128 S*LKPLKLSASLTRSANGPLHVPRS 54
Score = 53.8 bits (111), Expect(2) = 1e-057
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3 / +1
Query: 549 WLYATEAICGVKALDAGRTPLLAAWAERFCALE 647
W+ TEA+CG++ LDA +TPLL AW ERF +E
Sbjct: 541 WMQGTEALCGLELLDATKTPLLLAWMERFGGME 639
Score = 35.9 bits (72), Expect(2) = 2e-023
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -3
Query: 631 RSAHAASSGVLPASRAFTPQMASV 560
RS HA+S+GVL ASR+ PQ ASV
Sbjct: 623 RSIHASSNGVLVASRSSRPQSASV 552
>gb|BF621862.3|BF621862 HVSMEa0001C05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0001C05f, mRNA sequence
Length = 595
Score = 222 bits (480), Expect = 2e-057
Identities = 92/173 (53%), Positives = 113/173 (65%)
Frame = +3 / +1
Query: 48 GKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHG 227
G++L LLG WASPFV R ++ALSLKGL++ EE+L +KSELLLSSNPV KKVPVL+H+G
Sbjct: 73 GEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNG 252
Query: 228 KPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXX 407
KPVCES II+QY+DEAF P+ LPSDPY RA+ARFWA+Y+DDK + W+ RG+T
Sbjct: 253 KPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWVQATRGKTEE 432
Query: 408 XXXXXXXXXXXXXXTLEQAFRECSKGKAFFXXXXXXXXXXXXXXXXXWLYATE 566
LE A RECSKG+ +F WL ATE
Sbjct: 433 EKSEGINQTFAAVEMLEGALRECSKGEGYFGGETVGLVDVSLGSLLSWLNATE 591
>gb|BF625550.2|BF625550 HVSMEa0011E08f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011E08f, mRNA sequence
Length = 639
Score = 221 bits (478), Expect = 3e-057
Identities = 99/200 (49%), Positives = 123/200 (61%)
Frame = +3 / +1
Query: 36 ASMAGKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVL 215
A A +L LLGL SPFV+R R+AL +KGL+Y Y E++L +KSELLL SNPV KKVPVL
Sbjct: 34 AMAAEGDLKLLGLSVSPFVVRVRMALHMKGLSYEYIEQDLFNKSELLLKSNPVEKKVPVL 213
Query: 216 IHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRG 395
IH GK + +S IVQY+DE + A P+ LP DPYDRA +RFWA+Y DDK +SA++ + R
Sbjct: 214 IHDGKTILDSSAIVQYIDEVWAAMGPSILPVDPYDRAASRFWAAYADDKLFSAYVGINRA 393
Query: 396 RTXXXXXXXXXXXXXXXXTLEQAFRECSKGKAFFXXXXXXXXXXXXXXXXXWLYATEAIC 575
T LE+AF + S GKAFF WL A +
Sbjct: 394 TTKVERAEKVSETVAVLERLEEAFAKQSNGKAFFAGDSVGYLDLAVGCHLHWLKAQRKMF 573
Query: 576 GVKALDAGRTPLLAAWAERF 635
GV L+AGRTPLLA WA+RF
Sbjct: 574 GVVFLEAGRTPLLAGWAKRF 633
Score = 69.8 bits (146), Expect(3) = 3e-021
Identities = 34/55 (61%), Positives = 37/55 (67%)
Frame = -2 / -2
Query: 364 NLSST*EAQKRAMARS*GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTGTF 200
+LSS * AQKR ARS*GS GR G A + SS YCTM +S LP WMSTGTF
Sbjct: 362 SLSSA*AAQKREAARS*GSTGRIDGPMAAQTSSMYCTMADESSMVLPSWMSTGTF 198
Score = 40.5 bits (82), Expect(3) = 3e-021
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -2 / -2
Query: 139 YA*VRPLRLSAMRARSTNGLAHNPSSVSSFPAMLA 35
Y+*+RP SAMR R+TNGL PS+ S A +A
Sbjct: 137 YS*LRPFMCSAMRTRTTNGLTDKPSNFRSPSAAIA 33
Score = 32.2 bits (64), Expect(3) = 3e-021
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -2 / -2
Query: 634 NRSAHAASSGVLPASRAFTPQMASVA 557
NR A A SGVLPASR TP + A
Sbjct: 632 NRFAQPAKSGVLPASRNTTPNILRCA 555
>gb|BF624618.2|BF624618 HVSMEa0017E14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0017E14f, mRNA sequence
Length = 887
Score = 212 bits (457), Expect(2) = 5e-057
Identities = 86/150 (57%), Positives = 107/150 (71%)
Frame = +3 / +2
Query: 48 GKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHG 227
G++L LLG WASPFV R ++ALSLKGL++ EE+L +KSELLLSSNPV KKVPVL+H+G
Sbjct: 68 GEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNG 247
Query: 228 KPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXX 407
KPVCES II+QY+DEAF P+ LPSDPY RA+ARFWA+Y+DDK + W+ RG+T
Sbjct: 248 KPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWVQATRGKTEE 427
Query: 408 XXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
LE A RECS G+ +F
Sbjct: 428 EKSEGINQTFAAVEMLEGALRECS*GEGYF 517
Score = 29.5 bits (58), Expect(2) = 5e-057
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3 / +3
Query: 552 LYATEAICGVKALDAGRTPLLAAWAE 629
L AT+ + G K D +TP AAW +
Sbjct: 573 LNATKVMSGTKIFDPCKTPFFAAWMD 650
>gb|BE421272.1|BE421272 HWM007.F01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM007.F01, mRNA sequence
Length = 734
Score = 188 bits (406), Expect(2) = 7e-057
Identities = 76/148 (51%), Positives = 94/148 (63%)
Frame = +3 / +2
Query: 54 ELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKP 233
EL LLG W PF LR R+AL+ KGL+Y Y EE+L +KS+LLL SNPV KKVPVLIH+G P
Sbjct: 131 ELKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVP 310
Query: 234 VCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXX 413
+CES I++Y+DE + P LP DPY RA+ARFWA+Y+D + W +F G+T
Sbjct: 311 ICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEK 490
Query: 414 XXXXXXXXXXXXTLEQAFRECSKGKAFF 497
LE A RECS GK F
Sbjct: 491 HEGTKQTLAAVEKLEVALRECSSGKPVF 574
Score = 95.9 bits (203), Expect(2) = 2e-024
Identities = 57/148 (38%), Positives = 62/148 (41%)
Frame = -2 / -3
Query: 496 KKAFPLEHSLNXXXXXXXXXXXXXXXXXXXXXXLPLNTGIHAL*NLSST*EAQKRAMARS 317
K FPLEHSL LP N H S * AQ RA AR
Sbjct: 573 KTGFPLEHSLRATSSFSTAASVCFVPSCFSLSVLPTNIFHHGATRF*SM*AAQNRATARW 394
Query: 316 *GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTGTFXXXXXXXXXXXXXXXXXXSEY 137
*GS G + G SS Y M DSQ G P WM TGTF S Y
Sbjct: 393 *GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFTGLDSRRRSLLLARSSSWY 214
Query: 136 A*VRPLRLSAMRARSTNGLAHNPSSVSS 53
+*++PL+LSA RS NG H P S SS
Sbjct: 213 S*LKPLKLSASLTRSANGPLHVPRSFSS 130
Score = 52.4 bits (108), Expect(2) = 7e-057
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +3 / +2
Query: 549 WLYATEAICGVKALDAGRTPLLAAWAERFCALE 647
W+ TEA+CG++ LDA +TP+L AW ERF +E
Sbjct: 626 WMQGTEALCGLELLDATKTPVLLAWMERFGGME 724
Score = 36.8 bits (74), Expect(2) = 2e-024
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -2 / -3
Query: 655 LTPSSAQNRSAHAASSGVLPASRAFTPQMASV 560
L S RS HA+S+GVL ASR+ PQ ASV
Sbjct: 732 LAGSIPPKRSIHASSTGVLVASRSSRPQSASV 637
>gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0007C21f, mRNA sequence
Length = 694
Score = 211 bits (456), Expect(2) = 2e-056
Identities = 90/185 (48%), Positives = 110/185 (59%)
Frame = +3 / +3
Query: 24 SS*LASMAGKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKK 203
SS*L G +L LLG W SPFV R ++AL+LKGL+Y EENL +KSELLL SNPV KK
Sbjct: 69 SS*LEMAGGDDLKLLGAWPSPFVTRVKLALALKGLSYEDVEENLSNKSELLLKSNPVHKK 248
Query: 204 VPVLIHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIP 383
+PVLIH+G PVCES IIVQY+D+ F + P+ L DPY+RA+ARFW +YVDDK + W
Sbjct: 249 IPVLIHNGSPVCESMIIVQYIDDVFASTGPSLLSEDPYERAVARFWVAYVDDKLVAPWRQ 428
Query: 384 VFRGRTXXXXXXXXXXXXXXXXTLEQAFRECSKGKAFFXXXXXXXXXXXXXXXXXWLYAT 563
RG+T LE A RECSKG FF W+ T
Sbjct: 429 SLRGKTEEEKSEGKKHTFAAVEVLEGALRECSKGGDFFGGDGVGLVDVALGGLVSWMKVT 608
Query: 564 EAICG 578
+ + G
Sbjct: 609 DVLYG 623
Score = 98.7 bits (209), Expect(2) = 5e-025
Identities = 54/130 (41%), Positives = 60/130 (46%)
Frame = -2 / -1
Query: 589 RAFTPQMASVAYXXXXXXXXXXXXXXXXXXPKKAFPLEHSLNXXXXXXXXXXXXXXXXXX 410
R+ P SV + PKK+ PLEHSL
Sbjct: 634 RSCPP*STSVTFIQETSPPSATSTSPTPSPPKKSPPLEHSLRAPSRTSTAANVCFFPSDF 455
Query: 409 XXXXLPLNTGIHAL*NLSST*EAQKRAMARS*GSDGRKLGAAAGKASSTYCTMIWDSQTG 230
LPLN +H +LSST* QKRA ARS*GS R+ G K SS YCTMI DS TG
Sbjct: 454 SSSVLPLNDCLHGATSLSST*ATQKRATARS*GSSDRRDGPVLAKTSSMYCTMIMDSHTG 275
Query: 229 LPWWMSTGTF 200
P WMSTG F
Sbjct: 274 EPLWMSTGIF 245
Score = 35.9 bits (72), Expect(2) = 5e-025
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -2 / -1
Query: 136 A*VRPLRLSAMRARSTNGLAHNPSSVSSFPAMLAS*L 26
+*+RP + SA TNGL H PSS S P +++*L
Sbjct: 181 S*LRPFKASASFTLVTNGLGHAPSSFRSSPPAISN*L 71
Score = 27.6 bits (54), Expect(2) = 2e-056
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3 / +1
Query: 576 GVKALDAGRTPLLAAWAER 632
G K D +TPLLA W ER
Sbjct: 622 GDKIFDPVKTPLLALWEER 678
>gb|BJ548150.1|BJ548150 BJ548150 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13b18 3', mRNA sequence
Length = 754
Score = 155 bits (333), Expect(2) = 1e-055
Identities = 62/124 (50%), Positives = 78/124 (62%)
Frame = +3 / -1
Query: 126 LTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKPVCESQIIVQYVDEAFPAAAPNFLP 305
L+Y Y EE+L +KS+LLL SNPV KKVPVLIH+G P+CES I++Y+DE + P LP
Sbjct: 754 LSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLP 575
Query: 306 SDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXXXXXXXXXXXXXXTLEQAFRECSKG 485
DPY RA+ARFWA+Y+D + W +F G+T LE A RECS G
Sbjct: 574 GDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSG 395
Query: 486 KAFF 497
K FF
Sbjct: 394 KPFF 383
Score = 81.7 bits (172), Expect(2) = 1e-055
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +3 / -1
Query: 549 WLYATEAICGVKALDAGRTPLLAAWAERFCALEGVKGLIPDVDRLLEYTKARRA 710
W+ TEA+CG++ LDA +TPLL AW ERF +E K ++PD+DRL+E+ K +RA
Sbjct: 331 WMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEFAKMKRA 170
>gb|BQ466487.1|BQ466487 HT02K21r HT Hordeum vulgare subsp. vulgare cDNA clone HT02K21
5-PRIME, mRNA sequence
Length = 535
Score = 216 bits (466), Expect = 1e-055
Identities = 87/150 (58%), Positives = 108/150 (72%)
Frame = +3 / +1
Query: 48 GKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHG 227
G++L LLG WASPFV R ++ALSLKGL++ EE+L +KSELLLSSNPV KKVPVL+H+G
Sbjct: 79 GEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNG 258
Query: 228 KPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXX 407
KPVCES II+QY+DEAF P+ LPSDPY RA+ARFWA+Y+DDK + W+ RG+T
Sbjct: 259 KPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWVQATRGKTEE 438
Query: 408 XXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
LE A RECSKG+ +F
Sbjct: 439 EKSEGINQTFAAVEMLEGALRECSKGEGYF 528
>gb|BG299731.1|BG299731 HVSMEa0021J09f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0021J09f, mRNA sequence
Length = 569
Score = 215 bits (465), Expect = 2e-055
Identities = 88/169 (52%), Positives = 110/169 (65%)
Frame = +3 / +2
Query: 48 GKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHG 227
G++L LLG WASPFV R ++ALSLKGL++ EE+L +KSELLLSSNPV KKVPVL+H+G
Sbjct: 62 GEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNG 241
Query: 228 KPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXX 407
KPVCES II+QY+DEAF P+ LPSDPY RA+ARFWA+Y+DDK + W+ RG+T
Sbjct: 242 KPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWVQATRGKTEE 421
Query: 408 XXXXXXXXXXXXXXTLEQAFRECSKGKAFFXXXXXXXXXXXXXXXXXWL 554
+E A RECSKG+ +F WL
Sbjct: 422 EKSEGINQTFAAVEXVEGALRECSKGEGYFGGENRRTCDVSLGSLLSWL 568
>gb|BQ762933.1|BQ762933 EBro02_SQ006_H16 _R root, 3 week, hydroponic grown, low nitrogen,
cv Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA
clone EBro02_SQ006_H16 5', mRNA sequence
Length = 701
Score = 208 bits (448), Expect = 4e-053
Identities = 90/206 (43%), Positives = 112/206 (54%)
Frame = +3 / +1
Query: 81 SPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKPVCESQIIVQ 260
SPFV+R R+AL +K + Y Y E++L K ELLL SNPV KVPVLIH GK +CES IVQ
Sbjct: 13 SPFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDGKSICESLAIVQ 192
Query: 261 YVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXXXXXXXXXXX 440
YVDE + A + LP+DPYDRA ARFWA+Y D K AW+ + T
Sbjct: 193 YVDEVWAATGTSILPADPYDRAAARFWAAYADSKLLPAWVGIMWAATEEERAEKVGDTLA 372
Query: 441 XXXTLEQAFRECSKGKAFFXXXXXXXXXXXXXXXXXWLYATEAICGVKALDAGRTPLLAA 620
LE+AF +CS GK FF W + GV ++A R P LAA
Sbjct: 373 AIGQLEEAFGKCSNGKPFFAGDSVGYLDLVVGSQLLWFEVLRKMFGVVVIEACRAPFLAA 552
Query: 621 WAERFCALEGVKGLIPDVDRLLEYTK 698
W +RF + K ++PDV EY K
Sbjct: 553 WVKRFWETDTAKAVVPDVGTAAEYLK 630
Score = 76.7 bits (161), Expect(4) = 1e-021
Identities = 38/59 (64%), Positives = 40/59 (67%)
Frame = -2 / -1
Query: 376 HAL*NLSST*EAQKRAMARS*GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTGTF 200
HA +L S * AQKRA ARS*GS GR A + SSTYCTM DSQ LP WMSTGTF
Sbjct: 308 HAGKSLLSA*AAQKRAAARS*GSAGRMEVPVAAQTSSTYCTMASDSQMDLPSWMSTGTF 132
Score = 40.9 bits (83), Expect(4) = 1e-021
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -2 / -1
Query: 691 YSRSLSTSGISPLTPSSAQNRSAHAASSGVLPASRAFTPQM 569
YS ++ TSG + S +QNR HAA G L AS TP +
Sbjct: 623 YSAAVPTSGTTAFAVSVSQNRFTHAAKKGALQASMTTTPNI 501
Score = 22.1 bits (42), Expect(4) = 1e-021
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / -1
Query: 112 SAMRARSTNGL 80
SAMR R TNGL
Sbjct: 44 SAMRTRITNGL 12
Score = 21.7 bits (41), Expect(4) = 1e-021
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2 / -1
Query: 496 KKAFPLEHSLN 464
KK FPLEH N
Sbjct: 428 KKGFPLEHFPN 396
>gb|BF625970.2|BF625970 HVSMEa0015B01f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015B01f, mRNA sequence
Length = 720
Score = 207 bits (447), Expect = 6e-053
Identities = 87/158 (55%), Positives = 104/158 (65%)
Frame = +3 / +1
Query: 24 SS*LASMAGKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKK 203
SS*L G +L LLG W SPFV R ++AL+LKGL+Y EENL +KSELLL SNPV KK
Sbjct: 82 SS*LEMAGGDDLKLLGAWPSPFVTRVKLALALKGLSYEDVEENLSNKSELLLKSNPVHKK 261
Query: 204 VPVLIHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIP 383
+PVLIH+G PVCES IIVQY+D+ F + P+ L DPY+RA+ARFW +YVDDK + W
Sbjct: 262 IPVLIHNGSPVCESMIIVQYIDDVFASTGPSLLSEDPYERAVARFWVAYVDDKLVAPWRQ 441
Query: 384 VFRGRTXXXXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
RG+T LE A RECSKG FF
Sbjct: 442 SLRGKTEEEKSEGKKQTFAAVEVLEGALRECSKGGDFF 555
Score = 97.7 bits (207), Expect(3) = 1e-029
Identities = 49/99 (49%), Positives = 53/99 (53%)
Frame = -2 / -2
Query: 496 KKAFPLEHSLNXXXXXXXXXXXXXXXXXXXXXXLPLNTGIHAL*NLSST*EAQKRAMARS 317
KK+ PLEHSL LPLN +H +LSST* QKRA ARS
Sbjct: 554 KKSPPLEHSLRAPSRTSTAANVCFFPSDFSSSVLPLNDCLHGATSLSST*ATQKRATARS 375
Query: 316 *GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTGTF 200
*GS R+ G K SS YCTMI DS TG P WMSTG F
Sbjct: 374 *GSSERRDGPVLAKTSSMYCTMIMDSHTGEPLWMSTGIF 258
Score = 35.9 bits (72), Expect(3) = 1e-029
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -2 / -2
Query: 136 A*VRPLRLSAMRARSTNGLAHNPSSVSSFPAMLAS*L 26
+*+RP + SA TNGL H PSS S P +++*L
Sbjct: 194 S*LRPFKASASFTLVTNGLGHAPSSFRSSPPAISN*L 84
Score = 34.1 bits (68), Expect(3) = 1e-029
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -1 / -1
Query: 557 VQPPNKAAEHDVDEPHAVPSEEGLPLGA 474
+ P + ++ +VDEP+AVP+EE LGA
Sbjct: 615 LHPQEQTSQRNVDEPNAVPAEEVPSLGA 532
>gb|BE195630.3|BE195630 HVSMEh0089P24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0089P24f, mRNA sequence
Length = 799
Score = 184 bits (397), Expect(2) = 1e-052
Identities = 81/154 (52%), Positives = 101/154 (65%)
Frame = +3 / +1
Query: 36 ASMAGKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVL 215
A A +L LLGL SPFV+R R+AL +KGL+Y Y E++L +KSELLL SNPV KKVPVL
Sbjct: 31 AMAAEGDLKLLGLSVSPFVVRVRMALHMKGLSYEYIEQDLFNKSELLLKSNPVEKKVPVL 210
Query: 216 IHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRG 395
IH GK + +S IVQY+DE + A P+ LP DPYDRA RFWA+Y DDK +SA++ + R
Sbjct: 211 IHDGKTILDSSAIVQYIDEVWAAMGPSILPVDPYDRAAFRFWAAYADDKLFSAYVGINRA 390
Query: 396 RTXXXXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
T LE+AF + S GKAFF
Sbjct: 391 TTKVERAEKVIETVAVLERLEEAFAKQSNGKAFF 492
Score = 42.3 bits (86), Expect(2) = 1e-052
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3 / +1
Query: 549 WLYATEAICGVKALDAGRTPLLAAWAERFCALEGVKGLIPDVDR 680
WL A + GV L+AGR P+ WA+R + K +P DR
Sbjct: 544 WLKAQRKMFGVVFLEAGRNPVFTGWAKRVAKTDPAKEGVPTTDR 675
>gb|BF623115.2|BF623115 HVSMEa0014H14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0014H14f, mRNA sequence
Length = 857
Score = 167 bits (359), Expect(2) = 2e-052
Identities = 69/114 (60%), Positives = 83/114 (72%)
Frame = +3 / +3
Query: 156 DDKSELLLSSNPVLKKVPVLIHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIAR 335
D KS LLL+SNPV K+VPVLIH+GKPV ESQ+IVQYVDEAFPA++P FLPSDP+ RA AR
Sbjct: 111 DSKSPLLLASNPVHKRVPVLIHNGKPVPESQLIVQYVDEAFPASSPRFLPSDPHKRADAR 290
Query: 336 FWASYVDDKFYSAWIPVFRGRTXXXXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
FWA YV+ + +AW+PV+RGRT TLE+ F ECSKGK +
Sbjct: 291 FWAYYVNGELLNAWLPVYRGRTGKERAQAEGRDGTTLKTLERTF*ECSKGKGIY 452
Score = 94.1 bits (199), Expect(3) = 4e-031
Identities = 45/64 (70%), Positives = 47/64 (73%)
Frame = -2 / -2
Query: 394 PLNTGIHAL*NLSST*EAQKRAMARS*GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWM 215
PL TG HAL + T* AQKRA AR GS+GRK G AGKASSTYCTM DS TGLP WM
Sbjct: 349 PL*TGSHALSSSPLT**AQKRASARLCGSEGRKRGELAGKASSTYCTMSCDSGTGLPLWM 170
Query: 214 STGT 203
STGT
Sbjct: 169 STGT 158
Score = 59.3 bits (123), Expect(2) = 2e-052
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +3 / +3
Query: 54 ELTLLGLWASPFVLRARIALSLKGLTYAYSEE 149
ELTL+G W+SPF LRAR AL+LKGL YAY EE
Sbjct: 3 ELTLVGYWSSPFALRARYALNLKGLPYAYVEE 98
Score = 41.8 bits (85), Expect(3) = 4e-031
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = -2 / -2
Query: 139 YA*VRPLRLSAMRARSTNGLAHNPSSVSS 53
YA* RPLRL A RARS NGL P+SVSS
Sbjct: 88 YA*GRPLRLRA*RARSANGLDQ*PTSVSS 2
Score = 36.8 bits (74), Expect(3) = 4e-031
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -1 / -1
Query: 569 GLGGVQPPNKAAEHDVDEPHAVPSEEGLPLGA 474
GL V PP A +DV EPH VP LPLGA
Sbjct: 524 GLDCV*PPYLATCYDVLEPHRVPLINALPLGA 429
>gb|BM816911.1|BM816911 HB106C10_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB106C10_SK.ab1 similar to Glutathione
transferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 924
Score = 156 bits (336), Expect(2) = 6e-052
Identities = 66/104 (63%), Positives = 79/104 (75%)
Frame = +3 / +2
Query: 63 LLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKPVCE 242
+LG W SPFV+R IAL LKG+ + EE + +KSELLL+SNPV K +PVL+HHG+PV E
Sbjct: 107 VLGRWPSPFVIRVLIALGLKGVDHELVEEAMGNKSELLLASNPVHKMIPVLLHHGRPVSE 286
Query: 243 SQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSA 374
S IIVQYV EA+ + AP LPSDPY RA RFWA YVDDKF +A
Sbjct: 287 SLIIVQYVHEAWSSHAPALLPSDPYARAAERFWAQYVDDKFPTA 418
Score = 73.5 bits (154), Expect(3) = 2e-022
Identities = 35/56 (62%), Positives = 41/56 (73%)
Frame = -2 / -1
Query: 373 AL*NLSST*EAQKRAMARS*GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTG 206
A+ NLSST AQ R+ AR+*GSDGR GA +AS TY TM+ DS+TGLPW STG
Sbjct: 417 AVGNLSSTYWAQNRSAARA*GSDGRSAGAWEDQASWTYWTMMRDSETGLPWCRSTG 250
Score = 68.0 bits (142), Expect(2) = 6e-052
Identities = 34/107 (31%), Positives = 43/107 (40%)
Frame = +3 / +2
Query: 357 DKFYSAWIPVFRGRTXXXXXXXXXXXXXXXXTLEQAFRECSKGKAFFXXXXXXXXXXXXX 536
D + I V RGR LE A EC GK +F
Sbjct: 398 DDKFPTAIRVLRGRLGGDKDEAAVQVRAALQRLEVALVECGGGKDYFGGDGVGYLDIALG 577
Query: 537 XXXXWLYATEAICGVKALDAGRTPLLAAWAERFCALEGVKGLIPDVD 677
W+ A E I ++ LD + P LAAWA+RFCA V G +P V+
Sbjct: 578 SHLGWIXAVERIAELRLLDEAKVPKLAAWADRFCAHPAVAGAMPGVE 718
Score = 48.3 bits (99), Expect(3) = 2e-022
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = -2 / -1
Query: 676 STSGISPLTPSSAQNRSAHAASSGVLPASRAFTPQMASVA 557
ST GI+P T AQNRSAHAAS G L +SR+ + + S A
Sbjct: 717 STPGIAPATAGWAQNRSAHAASLGTLASSRSLSSAILSTA 598
Score = 26.3 bits (51), Expect(3) = 2e-022
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3 / -2
Query: 102 APGARTGSPITPA 64
APG+RTGS I PA
Sbjct: 146 APGSRTGSAICPA 108
>gb|BE421080.1|BE421080 HWM005.F01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM005.F01, mRNA sequence
Length = 953
Score = 190 bits (410), Expect(3) = 3e-051
Identities = 76/148 (51%), Positives = 95/148 (64%)
Frame = +3 / +3
Query: 54 ELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKP 233
EL LLG W PF LR R+AL+ KGL+Y Y EE+L +KS+LLL SNPV KKVPVLIH+G P
Sbjct: 369 ELKLLGTWRGPFALRVRLALNFKGLSYEYQEEDLANKSDLLLESNPVNKKVPVLIHNGVP 548
Query: 234 VCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXX 413
+CES I++Y+DE + P LP DPY RA+ARFWA+Y+D + W +F G+T
Sbjct: 549 ICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPWWKMFVGKTDKEK 728
Query: 414 XXXXXXXXXXXXTLEQAFRECSKGKAFF 497
L+ A RECS GK FF
Sbjct: 729 HEGTKQTLAAVEKLQVALRECSSGKPFF 812
Score = 25.8 bits (50), Expect(3) = 3e-051
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +2
Query: 600 RTPLLAAWAERF 635
+TPLL AW ERF
Sbjct: 914 QTPLLLAWMERF 949
Score = 24.4 bits (47), Expect(3) = 3e-051
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3 / +3
Query: 549 WLYATEAICGVKALDA 596
W+ TEA+ G++ LDA
Sbjct: 864 WMQGTEALWGLELLDA 911
>gb|BJ544573.1|BJ544573 BJ544573 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31o05 5', mRNA sequence
Length = 605
Score = 201 bits (434), Expect = 4e-051
Identities = 88/201 (43%), Positives = 110/201 (54%)
Frame = +3 / +1
Query: 63 LLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKPVCE 242
LLGL SPFV+R R+AL +K + Y Y E++L K ELLL SNPV KVPVLIH GK +CE
Sbjct: 1 LLGLTVSPFVIRVRMALHMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDGKSICE 180
Query: 243 SQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXXXXX 422
S IVQYVDE + A + LP+DPYDRA ARFWA+Y D K AW+ + T
Sbjct: 181 SLAIVQYVDEVWAATGTSILPADPYDRAAARFWAAYADSKLLPAWVGIMWAATEEERAEK 360
Query: 423 XXXXXXXXXTLEQAFRECSKGKAFFXXXXXXXXXXXXXXXXXWLYATEAICGVKALDAGR 602
LE+AF +CS GK FF W + GV ++A R
Sbjct: 361 VGDTLAAIGQLEEAFGKCSNGKPFFAGDSVGYLDLVVGSQLLWFEVLRKMFGVVVIEACR 540
Query: 603 TPLLAAWAERFCALEGVKGLI 665
P LAAW +RF + K ++
Sbjct: 541 APFLAAWVKRFWETDTAKAVV 603
>gb|BJ544235.1|BJ544235 BJ544235 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak22d17 5', mRNA sequence
Length = 606
Score = 201 bits (433), Expect = 5e-051
Identities = 88/193 (45%), Positives = 107/193 (55%)
Frame = +3 / +2
Query: 57 LTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKPV 236
L LLGL SPFV+R R+AL +K + Y Y E++L K ELLL SNPV KVPVLIH GK +
Sbjct: 14 LKLLGLTVSPFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDGKSI 193
Query: 237 CESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXXX 416
CES IVQYVDE + A + LP+DPYDRA ARFWA+Y D K AW+ + T
Sbjct: 194 CESLAIVQYVDEVWAATGTSILPADPYDRAAARFWAAYADSKLLPAWVGIMWAATEEERA 373
Query: 417 XXXXXXXXXXXTLEQAFRECSKGKAFFXXXXXXXXXXXXXXXXXWLYATEAICGVKALDA 596
LE+AF +CS GK FF W + GV ++A
Sbjct: 374 EKVGDTLAAIGQLEEAFGKCSNGKPFFAGDSVGYLDLVVGSQLLWFEVLRKMFGVVVIEA 553
Query: 597 GRTPLLAAWAERF 635
R P LAAW +RF
Sbjct: 554 CRAPFLAAWVKRF 592
>gb|CA013731.1|CA013731 HT09F05r HT Hordeum vulgare subsp. vulgare cDNA clone HT09F05
5-PRIME, mRNA sequence
Length = 615
Score = 199 bits (430), Expect = 1e-050
Identities = 88/193 (45%), Positives = 107/193 (55%)
Frame = +3 / +3
Query: 57 LTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKPV 236
L LLGL SPFV+R R+AL +K + Y Y E++L K ELLL SNPV KVPVLIH GK +
Sbjct: 21 LKLLGLTVSPFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDGKSI 200
Query: 237 CESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXXX 416
CES IVQYVDE + A + LP+DPYDRA ARFWA+Y D K AW+ + T
Sbjct: 201 CESLAIVQYVDEVWAATGTSILPADPYDRAAARFWAAYADSKLLPAWVGIMWRPTEEERA 380
Query: 417 XXXXXXXXXXXTLEQAFRECSKGKAFFXXXXXXXXXXXXXXXXXWLYATEAICGVKALDA 596
LE+AF +CS GK FF W + GV ++A
Sbjct: 381 EKVGDTLAAIGQLEEAFGKCSNGKPFFAGDSVGYLDLVVGSQLLWFEVLRKMFGVVVIEA 560
Query: 597 GRTPLLAAWAERF 635
R P LAAW +RF
Sbjct: 561 CRAPFLAAWVKRF 599
>gb|BF621473.2|BF621473 HVSMEa0011B16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011B16f, mRNA sequence
Length = 848
Score = 189 bits (408), Expect(2) = 5e-050
Identities = 80/151 (52%), Positives = 102/151 (67%)
Frame = +3 / +2
Query: 45 AGKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHH 224
A ++ LLG+WASP+VLR R+ALS+KG+ Y Y+EE+L KSELLL SNPV KVPVLIH
Sbjct: 86 AADDVKLLGMWASPYVLRVRLALSIKGIRYEYAEEDLRHKSELLLRSNPVHNKVPVLIHG 265
Query: 225 GKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTX 404
GKPVCES +I+QY+DEAF A P LP+DP++RA+ARFWA++++D A +T
Sbjct: 266 GKPVCESLVILQYIDEAFGGAGPALLPADPHERAVARFWAAFIEDTLVKAMNQASWSKTE 445
Query: 405 XXXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
TLE A R+ S GK FF
Sbjct: 446 GEKVEGNKXATAALRTLEVALRDVSMGKPFF 538
Score = 101 bits (216), Expect(2) = 1e-026
Identities = 54/107 (50%), Positives = 60/107 (56%)
Frame = -2 / -3
Query: 364 NLSST*EAQKRAMARS*GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTGTFXXXXX 185
++SS AQ RA ARS GS GR+ G A KASS YC M DSQTGLP W+STGT
Sbjct: 405 SVSSMKAAQNRATARSWGSAGRRAGPAPPKASSMYCRMTSDSQTGLPPWISTGTLLWTGF 226
Query: 184 XXXXXXXXXXXXXSEYA*VRPLRLSAMRARSTNGLAHNPSSVSSFPA 44
S Y+* PL LSA R R T GLAH PSS +S A
Sbjct: 225 DRRSSSLLCRRSSSAYS*RMPLMLSARRTRRTYGLAHMPSSFTSSAA 85
Score = 38.2 bits (77), Expect(2) = 1e-026
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = -1 / -2
Query: 566 LGGVQPPNKAAEHDVDEPHAVPSEEGLPLG 477
L G +AAEHDV P AV S+EGLP G
Sbjct: 607 LHGAHTSKEAAEHDVHIPSAVASKEGLPHG 518
Score = 28.6 bits (56), Expect(2) = 5e-050
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +1 / +3
Query: 499 EGTAWGSSTSCSAALLGGCTPPR 567
E TA G TSCSAA L C P R
Sbjct: 540 EATALGMWTSCSAASLLVCAPWR 608
>gb|BF622512.2|BF622512 HVSMEa0004K18f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0004K18f, mRNA sequence
Length = 487
Score = 197 bits (424), Expect = 9e-050
Identities = 77/118 (65%), Positives = 96/118 (81%)
Frame = +3 / +2
Query: 48 GKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHG 227
G++L LLG WASPFV R ++ALSLKGL++ EE+L +KSELLLSSNPV KKVPVL+H+G
Sbjct: 68 GEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNG 247
Query: 228 KPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRT 401
KPVCES II+QY+DEAF P+ LPSDPY RA+ARFWA+Y+DDK + W+ RG+T
Sbjct: 248 KPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWVQATRGKT 421
>gb|BF624202.2|BF624202 HVSMEa0012J22f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0012J22f, mRNA sequence
Length = 487
Score = 197 bits (424), Expect = 9e-050
Identities = 77/118 (65%), Positives = 96/118 (81%)
Frame = +3 / +1
Query: 48 GKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHG 227
G++L LLG WASPFV R ++ALSLKGL++ EE+L +KSELLLSSNPV KKVPVL+H+G
Sbjct: 76 GEDLKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNG 255
Query: 228 KPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRT 401
KPVCES II+QY+DEAF P+ LPSDPY RA+ARFWA+Y+DDK + W+ RG+T
Sbjct: 256 KPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKLVAPWVQATRGKT 429
>gb|AL504140.1|AL504140 AL504140 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04F05V 5', mRNA sequence
Length = 700
Score = 114 bits (244), Expect(2) = 1e-049
Identities = 50/125 (40%), Positives = 61/125 (48%)
Frame = +3 / +1
Query: 282 AAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXXXXXXXXXXXXXXTLEQ 461
A + LP+DPY RA+ARFWA+YVDDK + AW+ + R T +E
Sbjct: 319 ADGASLLPADPYGRAVARFWAAYVDDKLFPAWLGILRAATEEDRAEKLDAALAVIGLMED 498
Query: 462 AFRECSKGKAFFXXXXXXXXXXXXXXXXXWLYATEAICGVKALDAGRTPLLAAWAERFCA 641
A +CS GK FF W A + GV +DAGRTP LAAWAERF
Sbjct: 499 ALAQCSDGKDFFAGDSVGYLDLALGCNLFWFKALREMFGVTLIDAGRTPGLAAWAERFKQ 678
Query: 642 LEGVK 656
E K
Sbjct: 679 TEAGK 693
Score = 102 bits (217), Expect(2) = 1e-049
Identities = 44/81 (54%), Positives = 58/81 (71%)
Frame = +3 / +1
Query: 48 GKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHG 227
G ++ LLG SPF +R R+AL KG++Y Y E++L K +LLL+SNPV KVPVLIH G
Sbjct: 88 GDDVKLLGSVMSPFAVRVRMALHAKGVSYEYLEQDLFHKGDLLLASNPVHNKVPVLIHAG 267
Query: 228 KPVCESQIIVQYVDEAFPAAA 290
+PVCES IV+YV+E + A
Sbjct: 268 RPVCESLAIVEYVNEVWADGA 330
Score = 46.0 bits (94), Expect(4) = 1e-021
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2 / -3
Query: 289 AAAGKASSTYCTMIWDSQTGLPWWMSTGT 203
A + + S TY TM DSQTGLP WMSTGT
Sbjct: 329 APSAQTSLTYSTMASDSQTGLPAWMSTGT 243
Score = 44.1 bits (90), Expect(4) = 1e-021
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = -1 / -2
Query: 377 PRAVELVVDVGGPEASNGAVVGVGWKE 297
PR +LVVDVGGPEA + A VGVG +E
Sbjct: 414 PRXEQLVVDVGGPEAGDSAAVGVGREE 334
Score = 40.5 bits (82), Expect(4) = 1e-021
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -2 / -3
Query: 139 YA*VRPLRLSAMRARSTNGLAHNPSSVSSFPA 44
Y+*+ PL SAMR R+ NGL PSS++S P+
Sbjct: 179 YS*LTPLACSAMRTRTANGLITEPSSLTSSPS 84
Score = 30.9 bits (61), Expect(4) = 1e-021
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -2 / -3
Query: 634 NRSAHAASSGVLPASRAFTPQMASVA 557
N SA AA GVLPAS + TP ++ A
Sbjct: 671 NLSAQAARPGVLPASMSVTPNISRSA 594
>gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. vulgare cDNA clone HR01D11
5-PRIME, mRNA sequence
Length = 500
Score = 194 bits (419), Expect = 4e-049
Identities = 79/147 (53%), Positives = 100/147 (68%)
Frame = +3 / +3
Query: 21 GSS*LASMAGKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLK 200
G +A+ G E+ LLG+WASPFV+RA++AL LKG+ Y Y EE L +KS+L L SNPV K
Sbjct: 57 GRKRMANRGGDEVKLLGMWASPFVVRAQLALRLKGVNYEYVEEELANKSDLFLRSNPVHK 236
Query: 201 KVPVLIHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWI 380
VPVLIH GKP+CESQ+I+QY+DEAF P+ LP+DPY+RA+ARFWA+YV+DK W
Sbjct: 237 TVPVLIHDGKPICESQVILQYIDEAFAGVGPSLLPADPYERAVARFWAAYVEDKLLPPWR 416
Query: 381 PVFRGRTXXXXXXXXXXXXXXXXTLEQ 461
VFR T TLE+
Sbjct: 417 KVFRVTTDEERAEWTRQTVAAVDTLEE 497
Score = 131 bits (281), Expect = 5e-030
Identities = 67/124 (54%), Positives = 74/124 (59%)
Frame = -2 / -2
Query: 391 LNTGIHAL*NLSST*EAQKRAMARS*GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMS 212
LNT +H +LSST* AQKRA ARS*GS GR+ G KASS YC M WDSQ GLP WMS
Sbjct: 427 LNTFLHGGSSLSST*AAQKRATARS*GSAGRRDGPTPAKASSMYCRMTWDSQMGLPSWMS 248
Query: 211 TGTFXXXXXXXXXXXXXXXXXXSEYA*VRPLRLSAMRARSTNGLAHNPSSVSSFPAMLAS 32
TGT S Y+* PLR SA A +TNGLAH PSS +S P +LA
Sbjct: 247 TGTVLCTGLERRKRSLLLASSSSTYS*FTPLRRSASCALTTNGLAHMPSSFTSSPPLLAI 68
Query: 31 *LLP 20
LP
Sbjct: 67 LFLP 56
>gb|BE214950.1|BE214950 HV_CEb0005F03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0005F03f, mRNA sequence
Length = 946
Score = 192 bits (413), Expect = 3e-048
Identities = 85/195 (43%), Positives = 105/195 (53%)
Frame = +3 / +3
Query: 48 GKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHG 227
G L LLGL SPFV+R R+AL +K + Y Y E++L K ELLL SNPV KVPVLIH G
Sbjct: 15 GTSLKLLGLTVSPFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDG 194
Query: 228 KPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXX 407
K +CES IVQYVDE + A + LP+DPYDRA ARFWA+Y D K AW+ + T
Sbjct: 195 KSICESLAIVQYVDEVWAATGTSILPADPYDRAAARFWAAYADSKLLPAWVGIMWAATEE 374
Query: 408 XXXXXXXXXXXXXXTLEQAFRECSKGKAFFXXXXXXXXXXXXXXXXXWLYATEAICGVKA 587
LE+AF +CS GK FF WL + V
Sbjct: 375 ERAENVGDTLAAIGQLEEAFGKCSNGKPFFAGDSVRYLDLVVRSQLLWLXVLRKMLRVGV 554
Query: 588 LDAGRTPLLAAWAER 632
++A + AAW +R
Sbjct: 555 IEACKAXFXAAWVKR 599
>gb|BJ548512.1|BJ548512 BJ548512 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29b04 3', mRNA sequence
Length = 662
Score = 130 bits (278), Expect(2) = 4e-048
Identities = 51/105 (48%), Positives = 63/105 (60%)
Frame = +3 / -3
Query: 183 SNPVLKKVPVLIHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDK 362
SNPV KKVPVLIH+G P+CES I++Y+DE + P LP DPY RA+ARFWA+Y+D
Sbjct: 657 SNPVNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQN 478
Query: 363 FYSAWIPVFRGRTXXXXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
+ W +F G+T LE A RECS GK FF
Sbjct: 477 LVAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFF 343
Score = 81.7 bits (172), Expect(2) = 4e-048
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +3 / -3
Query: 549 WLYATEAICGVKALDAGRTPLLAAWAERFCALEGVKGLIPDVDRLLEYTKARRA 710
W+ TEA+CG++ LDA +TPLL AW ERF +E K ++PD+DRL+E+ K +RA
Sbjct: 291 WMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEFAKMKRA 130
>gb|BJ548248.1|BJ548248 BJ548248 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal20p16 3', mRNA sequence
Length = 652
Score = 128 bits (274), Expect(2) = 1e-047
Identities = 50/104 (48%), Positives = 62/104 (59%)
Frame = +3 / -1
Query: 186 NPVLKKVPVLIHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKF 365
NPV KKVPVLIH+G P+CES I++Y+DE + P LP DPY RA+ARFWA+Y+D
Sbjct: 652 NPVNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNL 473
Query: 366 YSAWIPVFRGRTXXXXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
+ W +F G+T LE A RECS GK FF
Sbjct: 472 VAPWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFF 341
Score = 81.7 bits (172), Expect(2) = 1e-047
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +3 / -2
Query: 549 WLYATEAICGVKALDAGRTPLLAAWAERFCALEGVKGLIPDVDRLLEYTKARRA 710
W+ TEA+CG++ LDA +TPLL AW ERF +E K ++PD+DRL+E+ K +RA
Sbjct: 288 WMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEFAKMKRA 127
>gb|AL505815.1|AL505815 AL505815 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09J19V 5', mRNA sequence
Length = 500
Score = 188 bits (406), Expect = 3e-047
Identities = 76/126 (60%), Positives = 93/126 (73%)
Frame = +3 / +3
Query: 24 SS*LASMAGKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKK 203
SS*L G +L LLG W SPFV R ++AL+LKGL+Y EENL +KSELLL SNPV KK
Sbjct: 84 SS*LEMAGGDDLKLLGAWPSPFVTRVKLALALKGLSYEDVEENLSNKSELLLKSNPVHKK 263
Query: 204 VPVLIHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIP 383
+PVLIH+G PVCES IIVQY+D+ F + P+ L DPY+RA+ARFW +YVDDK + W
Sbjct: 264 IPVLIHNGSPVCESMIIVQYIDDVFASTGPSLLSEDPYERAVARFWVAYVDDKLVAPWRQ 443
Query: 384 VFRGRT 401
RG+T
Sbjct: 444 SLRGKT 461
Score = 86.8 bits (183), Expect(2) = 2e-021
Identities = 40/65 (61%), Positives = 43/65 (66%)
Frame = -2 / -2
Query: 394 PLNTGIHAL*NLSST*EAQKRAMARS*GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWM 215
PLN +H +LSST* QKRA ARS*GS R+ G K SS YCTMI DS TG P WM
Sbjct: 454 PLNDCLHGATSLSST*ATQKRATARS*GSSERRDGPVLAKTSSMYCTMIMDSHTGEPLWM 275
Query: 214 STGTF 200
STG F
Sbjct: 274 STGIF 260
Score = 35.9 bits (72), Expect(2) = 2e-021
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = -2 / -2
Query: 136 A*VRPLRLSAMRARSTNGLAHNPSSVSSFPAMLAS*L 26
+*+RP + SA TNGL H PSS S P +++*L
Sbjct: 196 S*LRPFKASASFTLVTNGLGHAPSSFRSSPPAISN*L 86
>gb|BM369733.2|BM369733 EBem07_SQ004_H07_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ004_H07 5', mRNA sequence
Length = 484
Score = 188 bits (406), Expect = 3e-047
Identities = 75/138 (54%), Positives = 98/138 (71%)
Frame = +3 / +2
Query: 54 ELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKP 233
EL LLG W SP+V+R ++AL +KGL+Y Y E++L KS+LLLSSNPV KKVPVLIH G+P
Sbjct: 71 ELQLLGAWMSPYVIRVKVALQMKGLSYDYIEQDLQHKSDLLLSSNPVHKKVPVLIHDGRP 250
Query: 234 VCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXX 413
VCES ++++YVDEA+ P LP+DPYDRA+ARFWA+YV+D F+ +W P+ R T
Sbjct: 251 VCESLVVLEYVDEAWAGTGPPLLPADPYDRAVARFWATYVNDTFFPSWRPLLRATTAEXR 430
Query: 414 XXXXXXXXXXXXTLEQAF 467
LE+AF
Sbjct: 431 AEAFENVLPQVEALERAF 484
>gb|BF065184.1|BF065184 HV_CEb0023O18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023O18f, mRNA sequence
Length = 577
Score = 187 bits (402), Expect = 1e-046
Identities = 78/151 (51%), Positives = 100/151 (66%)
Frame = +3 / +1
Query: 45 AGKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHH 224
A ++ LLG+WASP+VLR R+ALS+KG+ Y Y+EE+L KSELLL SNPV KVPVLIH
Sbjct: 97 AADDVKLLGMWASPYVLRVRLALSIKGIRYEYAEEDLRHKSELLLRSNPVHNKVPVLIHG 276
Query: 225 GKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTX 404
GKPVCES +I+QY+DEAF A P LP+DP++RA+ARFWA++++D A +T
Sbjct: 277 GKPVCESLVILQYIDEAFGGAGPALLPADPHERAVARFWAAFIEDTLVKAMNQASWSKTE 456
Query: 405 XXXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
TLE A R+ GK FF
Sbjct: 457 GEKVEGNKQATAALRTLEVALRDVFHGKPFF 549
Score = 101 bits (216), Expect = 4e-021
Identities = 54/107 (50%), Positives = 60/107 (56%)
Frame = -2 / -3
Query: 364 NLSST*EAQKRAMARS*GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTGTFXXXXX 185
++SS AQ RA ARS GS GR+ G A KASS YC M DSQTGLP W+STGT
Sbjct: 416 SVSSMKAAQNRATARSWGSAGRRAGPAPPKASSMYCRMTSDSQTGLPPWISTGTLLWTGF 237
Query: 184 XXXXXXXXXXXXXSEYA*VRPLRLSAMRARSTNGLAHNPSSVSSFPA 44
S Y+* PL LSA R R T GLAH PSS +S A
Sbjct: 236 DRRSSSLLCRRSSSAYS*RMPLMLSARRTRRTYGLAHMPSSFTSSAA 96
>gb|BF257478.2|BF257478 HVSMEf0013A10f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0013A10f, mRNA sequence
Length = 493
Score = 186 bits (401), Expect = 1e-046
Identities = 81/154 (52%), Positives = 102/154 (66%)
Frame = +3 / +1
Query: 36 ASMAGKELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVL 215
A A +L LLGL SPFV+R R+AL +KGL+Y Y E++L +KSELLL SNPV KKVPVL
Sbjct: 16 AMAAEGDLKLLGLSVSPFVVRVRMALHMKGLSYEYIEQDLFNKSELLLKSNPVEKKVPVL 195
Query: 216 IHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRG 395
IH GK + +S IVQY+DE + A P+ LP DPYDRA +RFWA+Y DDK +SA++ + R
Sbjct: 196 IHDGKTILDSSAIVQYIDEVWAAMGPSILPVDPYDRAASRFWAAYADDKLFSAYVGINRA 375
Query: 396 RTXXXXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
T LE+AF + S GKAFF
Sbjct: 376 TTKVERAEKVSETVAVLERLEEAFAKQSNGKAFF 477
>gb|BF623190.3|BF623190 HVSMEa0015C04f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015C04f, mRNA sequence
Length = 826
Score = 177 bits (381), Expect(2) = 2e-046
Identities = 73/132 (55%), Positives = 87/132 (65%)
Frame = +3 / +2
Query: 102 RIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKPVCESQIIVQYVDEAFP 281
R+AL+LKGL+Y EENL +KSELLL SNPV KK+PVLIH+G PVCES IIVQY+D+ F
Sbjct: 164 RLALALKGLSYEDVEENLSNKSELLLKSNPVHKKIPVLIHNGSPVCESMIIVQYIDDVFD 343
Query: 282 AAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXXXXXXXXXXXXXXTLEQ 461
+ P+ L DPY+RA+ARFW YVDDK + W RG+T LE
Sbjct: 344 STGPSLLSEDPYERAVARFWVGYVDDKLVAPWRQSLRGKTEEEKSEGKKQTFAAVEVLEG 523
Query: 462 AFRECSKGKAFF 497
A RECSKG FF
Sbjct: 524 ALRECSKGGDFF 559
Score = 97.7 bits (207), Expect(3) = 2e-026
Identities = 49/99 (49%), Positives = 53/99 (53%)
Frame = -2 / -2
Query: 496 KKAFPLEHSLNXXXXXXXXXXXXXXXXXXXXXXLPLNTGIHAL*NLSST*EAQKRAMARS 317
KK+ PLEHSL LPLN +H +LSST* QKRA ARS
Sbjct: 558 KKSPPLEHSLRAPSRTSTAANVCFFPSDFSSSVLPLNDCLHGATSLSST*PTQKRATARS 379
Query: 316 *GSDGRKLGAAAGKASSTYCTMIWDSQTGLPWWMSTGTF 200
*GS R+ G K SS YCTMI DS TG P WMSTG F
Sbjct: 378 *GSSERRDGPVLSKTSSMYCTMIMDSHTGEPLWMSTGIF 262
Score = 35.4 bits (71), Expect(3) = 2e-026
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1 / -1
Query: 584 LHPADGLGGVQPPNKAAEHDVDEPHAVPSEEGLPLGA 474
L P +G P N+ + +VDEP+ VP +E LGA
Sbjct: 646 LSPETHIGHFNPRNETSRRNVDEPNTVPPKEVPSLGA 536
Score = 28.6 bits (56), Expect(2) = 2e-046
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3 / +1
Query: 60 TLLGLWASPFVLRARIALSLKG 125
+L G W SPFV R + + L+G
Sbjct: 121 SLFGAWPSPFVTRVKTSARLEG 186
Score = 23.5 bits (45), Expect(3) = 2e-026
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = -3 / -3
Query: 717 QIRPAWPWYTPEACP 673
Q +P WPW A P
Sbjct: 785 QRKPLWPWEIQSAVP 741
>gb|CA011829.1|CA011829 HT03K17r HT Hordeum vulgare subsp. vulgare cDNA clone HT03K17
5-PRIME, mRNA sequence
Length = 558
Score = 185 bits (399), Expect = 3e-046
Identities = 80/182 (43%), Positives = 99/182 (54%)
Frame = +3 / +3
Query: 84 PFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKPVCESQIIVQY 263
PFV+R R+AL +K + Y Y E++L K ELLL SNPV KVPVLIH GK +CES IVQY
Sbjct: 12 PFVIRVRMALQMKRVGYEYMEQDLFTKGELLLKSNPVHMKVPVLIHDGKSICESLAIVQY 191
Query: 264 VDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXXXXXXXXXXXX 443
VDE + A + LP+DPYDRA ARFWA+Y D K AW+ + T
Sbjct: 192 VDEVWAATGTSILPADPYDRAAARFWAAYADSKLLPAWVGIMWAATEEERAEKVGDTLAA 371
Query: 444 XXTLEQAFRECSKGKAFFXXXXXXXXXXXXXXXXXWLYATEAICGVKALDAGRTPLLAAW 623
LE+AF +CS GK FF W + GV ++A R P LAAW
Sbjct: 372 IGQLEEAFGKCSNGKPFFAGDSVGYLDLVVGSQLLWFEVLRKMFGVVVIEACRAPFLAAW 551
Query: 624 AE 629
+
Sbjct: 552 VK 557
>gb|BI954235.1|BI954235 HVSMEm0016M03f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0016M03f, mRNA sequence
Length = 682
Score = 91.3 bits (193), Expect(3) = 5e-046
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3 / +1
Query: 132 YAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKPVCESQIIVQYVDEAFPAA 287
Y Y+EE+L KS+LLL+SNPV KVPVL+H GKPVCES +IVQY+DEAFP +
Sbjct: 118 YEYAEEDLTSKSDLLLASNPVHAKVPVLLHGGKPVCESMLIVQYLDEAFPGS 273
Score = 82.6 bits (174), Expect(3) = 5e-046
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = +3 / +1
Query: 285 AAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVFRGRTXXXXXXXXXXXXXXXXTLEQA 464
+ P LP+DP+DRA+ARFWA+Y DD F+++WI F G T +E A
Sbjct: 277 SGPALLPADPHDRAVARFWAAYADDHFFASWIKAFAGTTDEERAAATEAAAGALQKMEGA 456
Query: 465 FRECSKGKAFF 497
F EC +GK F
Sbjct: 457 FGECFQGKGLF 489
Score = 52.4 bits (108), Expect(3) = 4e-023
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = -2 / -3
Query: 280 GKASSTYCTMIWDSQTGLPWWMSTGT 203
GKASS YCTM DSQTGLP W STGT
Sbjct: 266 GKASSRYCTMSMDSQTGLPPWRSTGT 189
Score = 49.2 bits (101), Expect(3) = 5e-046
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3 / +1
Query: 54 ELTLLGLWASPFVLRARIALSLKGLT 131
EL LLG WASPFV RAR+AL LKG+T
Sbjct: 37 ELKLLGFWASPFVHRARVALHLKGIT 114
Score = 48.7 bits (100), Expect(3) = 4e-023
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -1 / -2
Query: 377 PRAVELVVDVGGPEASNGAVVGVGWKEIRCGGG 279
PR E+VV VGGPEA +GAVVGVG +E G G
Sbjct: 369 PRGKEVVVGVGGPEAGDGAVVGVGGEEGGAGAG 271
Score = 44.6 bits (91), Expect(3) = 4e-023
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -2 / -3
Query: 130 VRPLRLSAMRARSTNGLAHNPSSVSS 53
V PLR SA RAR TNGLA NPSS+SS
Sbjct: 113 VIPLRCSATRARCTNGLAQNPSSLSS 36
>gb|BU989585.1|BU989585 HF22C07r HF Hordeum vulgare subsp. vulgare cDNA clone HF22C07
5-PRIME, mRNA sequence
Length = 599
Score = 172 bits (371), Expect(2) = 6e-046
Identities = 66/112 (58%), Positives = 85/112 (75%)
Frame = +3 / +3
Query: 54 ELTLLGLWASPFVLRARIALSLKGLTYAYSEENLDDKSELLLSSNPVLKKVPVLIHHGKP 233
EL LLG WAS + R +IAL LKGL+Y Y E++LD+KS+LLL SNPV KKVPVLIH+GKP
Sbjct: 150 ELKLLGTWASAWAARVKIALHLKGLSYEYVEQDLDNKSDLLLMSNPVHKKVPVLIHNGKP 329
Query: 234 VCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYSAWIPVF 389
+CES +I++Y+DEA+ P+ LP+DPY+RA+ARFW Y+D K W F
Sbjct: 330 ICESVVILEYIDEAYGTTGPSLLPTDPYERAVARFWVDYIDQKLVIPWKVAF 485
Score = 31.8 bits (63), Expect(2) = 6e-046
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3 / +3
Query: 450 TLEQAFRECSKGKAFF 497
TLE A +ECSKGK FF
Sbjct: 543 TLEGALKECSKGKPFF 590
>gb|BJ548403.1|BJ548403 BJ548403 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24f11 3', mRNA sequence
Length = 716
Score = 122 bits (261), Expect(2) = 8e-046
Identities = 48/102 (47%), Positives = 60/102 (58%)
Frame = +3 / -3
Query: 192 VLKKVPVLIHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYS 371
V KKVPVLIH+G P+CES I++Y+DE + P LP DPY RA+ARFWA+Y+D +
Sbjct: 714 VNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVA 535
Query: 372 AWIPVFRGRTXXXXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
W +F G+T LE A RECS GK FF
Sbjct: 534 PWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFF 409
Score = 81.7 bits (172), Expect(2) = 8e-046
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +3 / -3
Query: 549 WLYATEAICGVKALDAGRTPLLAAWAERFCALEGVKGLIPDVDRLLEYTKARRA 710
W+ TEA+CG++ LDA +TPLL AW ERF +E K ++PD+DRL+E+ K +RA
Sbjct: 357 WMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEFAKMKRA 196
>gb|BJ548926.1|BJ548926 BJ548926 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal39i21 3', mRNA sequence
Length = 691
Score = 122 bits (261), Expect(2) = 8e-046
Identities = 48/102 (47%), Positives = 60/102 (58%)
Frame = +3 / -3
Query: 192 VLKKVPVLIHHGKPVCESQIIVQYVDEAFPAAAPNFLPSDPYDRAIARFWASYVDDKFYS 371
V KKVPVLIH+G P+CES I++Y+DE + P LP DPY RA+ARFWA+Y+D +
Sbjct: 689 VNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVA 510
Query: 372 AWIPVFRGRTXXXXXXXXXXXXXXXXTLEQAFRECSKGKAFF 497
W +F G+T LE A RECS GK FF
Sbjct: 509 PWWKMFVGKTDKEKHEGTKQTLAAVEKLEVALRECSSGKPFF 384
Score = 81.7 bits (172), Expect(2) = 8e-046
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +3 / -3
Query: 549 WLYATEAICGVKALDAGRTPLLAAWAERFCALEGVKGLIPDVDRLLEYTKARRA 710
W+ TEA+CG++ LDA +TPLL AW ERF +E K ++PD+DRL+E+ K +RA
Sbjct: 332 WMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEFAKMKRA 171
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 342,715,589
Number of Sequences: 312970
Number of extensions: 5015603
Number of successful extensions: 98166
Number of sequences better than 1.0e-020: 450
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 10189104838
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)