TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440958.2.1
(791 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ449787.1|BJ449787 BJ449787 K. Sato unpublished cDNA li... 132 1e-048
gb|BF259471.1|BF259471 HVSMEf0019D06f Hordeum vulgare seedl... 191 4e-048
gb|BF628874.2|BF628874 HVSMEb0009A12f Hordeum vulgare seedl... 187 8e-047
gb|BU974771.1|BU974771 HB29A24r BC Hordeum vulgare subsp. v... 132 1e-046
gb|AV917258.1|AV917258 AV917258 K. Sato unpublished cDNA li... 135 5e-046
gb|AV922427.1|AV922427 AV922427 K. Sato unpublished cDNA li... 135 5e-046
gb|CB877071.1|CB877071 HP03H10T HP Hordeum vulgare subsp. v... 132 7e-046
gb|CB879734.1|CB879734 HP03H10w HP Hordeum vulgare subsp. v... 132 2e-045
gb|AW982411.2|AW982411 HVSMEg0003D05f Hordeum vulgare pre-a... 173 1e-042
gb|BJ457207.1|BJ457207 BJ457207 K. Sato unpublished cDNA li... 131 2e-042
emb|X77467.1|HVOMET H.vulgare L. mRNA for flavonoid 7-O-met... 127 6e-042
gb|BJ467760.1|BJ467760 BJ467760 K. Sato unpublished cDNA li... 133 8e-041
gb|BJ462654.1|BJ462654 BJ462654 K. Sato unpublished cDNA li... 133 8e-041
gb|AL503735.1|AL503735 AL503735 Hordeum vulgare Barke roots... 129 1e-040
gb|CD662493.1|CD662493 UCRHV18_01ch06_b1 Drought-stressed D... 131 8e-040
gb|BI956571.1|BI956571 HVSMEn0004D06f Hordeum vulgare rachi... 161 3e-039
gb|CD662288.1|CD662288 UCRHV18_01aa10_b1 Drought-stressed D... 127 7e-039
gb|CD663812.1|CD663812 UCRHV18_06ch08_b1 Drought-stressed D... 127 7e-039
gb|AV930320.1|AV930320 AV930320 K. Sato unpublished cDNA li... 123 6e-038
gb|BF259348.2|BF259348 HVSMEf0019F16f Hordeum vulgare seedl... 128 2e-037
gb|AV836790.1|AV836790 AV836790 K. Sato unpublished cDNA li... 134 4e-037
gb|AL503330.1|AL503330 AL503330 Hordeum vulgare Barke roots... 129 4e-037
gb|AV918157.1|AV918157 AV918157 K. Sato unpublished cDNA li... 96 2e-036
gb|BM817346.1|BM817346 HC111F01_T3.ab1 HC Hordeum vulgare s... 124 1e-035
gb|BJ466406.1|BJ466406 BJ466406 K. Sato unpublished cDNA li... 111 2e-035
gb|CB879386.1|CB879386 HP02A07w HP Hordeum vulgare subsp. v... 131 2e-035
gb|BF264626.3|BF264626 HV_CEa0009O22f Hordeum vulgare seedl... 135 3e-035
gb|BM817329.1|BM817329 HC105E06_T3.ab1 HC Hordeum vulgare s... 146 2e-034
gb|BQ662115.1|BQ662115 HR01K01u HR Hordeum vulgare subsp. v... 114 2e-034
gb|BF253847.2|BF253847 HVSMEf0002E15f Hordeum vulgare seedl... 137 3e-034
gb|AV928262.1|AV928262 AV928262 K. Sato unpublished cDNA li... 112 4e-034
gb|AV929439.1|AV929439 AV929439 K. Sato unpublished cDNA li... 110 3e-033
gb|AV930452.1|AV930452 AV930452 K. Sato unpublished cDNA li... 106 2e-032
gb|AV931831.1|AV931831 AV931831 K. Sato unpublished cDNA li... 105 2e-032
gb|AV928022.1|AV928022 AV928022 K. Sato unpublished cDNA li... 105 2e-032
gb|AV921748.1|AV921748 AV921748 K. Sato unpublished cDNA li... 104 2e-032
gb|BJ468231.1|BJ468231 BJ468231 K. Sato unpublished cDNA li... 104 2e-032
gb|BJ468058.1|BJ468058 BJ468058 K. Sato unpublished cDNA li... 105 3e-032
gb|AV930527.1|AV930527 AV930527 K. Sato unpublished cDNA li... 102 2e-031
gb|BJ468335.1|BJ468335 BJ468335 K. Sato unpublished cDNA li... 100 9e-031
gb|AV921351.1|AV921351 AV921351 K. Sato unpublished cDNA li... 100 9e-031
gb|AV929534.1|AV929534 AV929534 K. Sato unpublished cDNA li... 96 9e-031
gb|BF256054.2|BF256054 HVSMEf0008J16f Hordeum vulgare seedl... 133 1e-030
gb|AV931697.1|AV931697 AV931697 K. Sato unpublished cDNA li... 99 1e-030
gb|AV916317.1|AV916317 AV916317 K. Sato unpublished cDNA li... 133 2e-030
gb|BI778623.2|BI778623 EBro07_SQ003_N10_R root, 3 week, red... 133 2e-030
gb|AV920383.1|AV920383 AV920383 K. Sato unpublished cDNA li... 100 3e-030
gb|BQ659524.1|BQ659524 HE01L03u HE Hordeum vulgare subsp. v... 121 4e-030
gb|BF260928.2|BF260928 HVSMEf0023E24f Hordeum vulgare seedl... 131 4e-030
gb|CB879142.1|CB879142 HP11B09T HP Hordeum vulgare subsp. v... 131 6e-030
gb|CV060228.1|CV060228 BNEL55g8 Barley EST endosperm librar... 131 6e-030
gb|BJ463550.1|BJ463550 BJ463550 K. Sato unpublished cDNA li... 68 8e-030
gb|AV918926.1|AV918926 AV918926 K. Sato unpublished cDNA li... 95 4e-029
gb|BQ658222.1|BQ658222 HA05D15u HA Hordeum vulgare subsp. v... 90 4e-029
gb|BE215581.1|BE215581 HV_CEb0008D04f Hordeum vulgare seedl... 127 5e-029
gb|BI778179.2|BI778179 EBro07_SQ002_H05_R root, 3 week, red... 127 5e-029
gb|AV913364.1|AV913364 AV913364 K. Sato unpublished cDNA li... 127 7e-029
gb|AV918663.1|AV918663 AV918663 K. Sato unpublished cDNA li... 127 7e-029
gb|BF259414.3|BF259414 HVSMEf0019A18f Hordeum vulgare seedl... 127 1e-028
gb|AL504432.1|AL504432 AL504432 Hordeum vulgare Barke roots... 126 2e-028
gb|BI777619.2|BI777619 EBro08_SQ001_A05_R root, 3 week, dro... 98 2e-028
gb|AV920613.1|AV920613 AV920613 K. Sato unpublished cDNA li... 88 3e-028
gb|AV918703.1|AV918703 AV918703 K. Sato unpublished cDNA li... 91 9e-028
gb|AV918077.1|AV918077 AV918077 K. Sato unpublished cDNA li... 91 9e-028
gb|BJ463768.1|BJ463768 BJ463768 K. Sato unpublished cDNA li... 123 1e-027
gb|BF257695.2|BF257695 HVSMEf0013J23f Hordeum vulgare seedl... 121 4e-027
gb|CD662211.1|CD662211 UCRHV18_01af07_b1 Drought-stressed D... 88 4e-027
gb|AV928023.1|AV928023 AV928023 K. Sato unpublished cDNA li... 102 5e-027
gb|BI959736.1|BI959736 HVSMEn0021B08f Hordeum vulgare rachi... 116 1e-026
gb|CD663904.1|CD663904 UCRHV18_07ab10_b1 Drought-stressed D... 74 1e-026
gb|CD663459.1|CD663459 UCRHV18_05cc01_b1 Drought-stressed D... 87 2e-026
gb|BF260117.2|BF260117 HVSMEf0021C12f Hordeum vulgare seedl... 113 5e-026
gb|BI960224.1|BI960224 HVSMEn0023M14f Hordeum vulgare rachi... 116 1e-025
gb|BI960616.1|BI960616 HVSMEn0025G07f Hordeum vulgare rachi... 116 1e-025
gb|CV055785.1|CV055785 BNEL123d8 Barley EST endosperm libra... 100 8e-025
gb|BF259032.2|BF259032 HVSMEf0017H09f Hordeum vulgare seedl... 113 1e-024
gb|AV917656.1|AV917656 AV917656 K. Sato unpublished cDNA li... 113 1e-024
gb|AV920163.1|AV920163 AV920163 K. Sato unpublished cDNA li... 113 1e-024
gb|AV930818.1|AV930818 AV930818 K. Sato unpublished cDNA li... 113 1e-024
gb|BJ466353.1|BJ466353 BJ466353 K. Sato unpublished cDNA li... 113 1e-024
gb|BJ466471.1|BJ466471 BJ466471 K. Sato unpublished cDNA li... 113 1e-024
gb|BJ466778.1|BJ466778 BJ466778 K. Sato unpublished cDNA li... 113 1e-024
gb|BJ468102.1|BJ468102 BJ468102 K. Sato unpublished cDNA li... 113 1e-024
gb|BQ471958.1|BQ471958 HV03P22r HV Hordeum vulgare subsp. v... 113 1e-024
gb|BQ472105.1|BQ472105 HV04G21r HV Hordeum vulgare subsp. v... 113 1e-024
gb|AL505122.1|AL505122 AL505122 Hordeum vulgare Barke roots... 112 3e-024
gb|BF257029.2|BF257029 HVSMEf0011K17f Hordeum vulgare seedl... 112 3e-024
gb|CD663190.1|CD663190 UCRHV18_04cf12_b1 Drought-stressed D... 78 3e-024
gb|BJ467944.1|BJ467944 BJ467944 K. Sato unpublished cDNA li... 77 4e-024
gb|BG418608.1|BG418608 HVSMEk0023H12f Hordeum vulgare testa... 111 7e-024
gb|AL504415.1|AL504415 AL504415 Hordeum vulgare Barke roots... 72 1e-023
gb|BQ765268.1|BQ765268 EBro03_SQ006_N17_R root, 3 week, wat... 72 1e-023
gb|BF255884.2|BF255884 HVSMEf0008B14f Hordeum vulgare seedl... 71 1e-023
gb|BI957415.1|BI957415 HVSMEn0009H02f Hordeum vulgare rachi... 108 3e-023
gb|BF253494.2|BF253494 HVSMEf0001B12f Hordeum vulgare seedl... 70 3e-023
gb|BF254372.2|BF254372 HVSMEf0003M21f Hordeum vulgare seedl... 73 6e-023
gb|AV927324.1|AV927324 AV927324 K. Sato unpublished cDNA li... 73 8e-023
gb|BJ468232.1|BJ468232 BJ468232 K. Sato unpublished cDNA li... 72 2e-022
gb|AV926277.1|AV926277 AV926277 K. Sato unpublished cDNA li... 72 2e-022
gb|CD662527.1|CD662527 UCRHV18_02ba04_b1 Drought-stressed D... 71 3e-022
gb|BF256785.2|BF256785 HVSMEf0011A04f Hordeum vulgare seedl... 103 1e-021
gb|CB879533.1|CB879533 HP02J21w HP Hordeum vulgare subsp. v... 78 7e-021
>gb|BJ449787.1|BJ449787 BJ449787 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak26l07 5', mRNA sequence
Length = 609
Score = 132 bits (283), Expect(3) = 1e-048
Identities = 55/108 (50%), Positives = 78/108 (72%)
Frame = +3 / +1
Query: 162 APADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILD 341
A D + +VAGDMF+S+ SADAV LK+I+HDWG DCVKILK CK+AIPA+ ++
Sbjct: 121 AAGDDILSFVAGDMFQSIPSADAVLLKNILHDWGHDDCVKILKCCKEAIPARNAGGKVII 300
Query: 342 IVVGAGSSSCDRKNVETQCLFDLYIMTINGVERDEREWKKIIFEAGFT 485
I + GS++ DRK E + + +L++M I G+ER+E EWK+I +AGF+
Sbjct: 301 IDMVRGSANGDRKINEMEAIQNLFMMYITGIERNEIEWKRIFSDAGFS 444
Score = 62.9 bits (131), Expect(3) = 1e-048
Identities = 25/39 (64%), Positives = 30/39 (76%)
Frame = +3 / +1
Query: 54 SLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPA 170
SLVDVGGG G TQ IAKAFP ++C+V+DLP+VV A
Sbjct: 4 SLVDVGGGNGAGTQVIAKAFPRIKCTVMDLPHVVVSGQA 120
Score = 58.3 bits (121), Expect(5) = 2e-024
Identities = 31/51 (60%), Positives = 33/51 (64%)
Frame = -2 / -2
Query: 313 AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGA 161
AGMA LQ SILTQS+ PQSC + L KTASAD NMSPAT S A
Sbjct: 272 AGMASLQHLSILTQSSWPQSCKMFLSKTASADGMD*NMSPATKLRMSSPAA 120
Score = 48.3 bits (99), Expect(5) = 2e-024
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -2 / -2
Query: 154 TTFGRSSTLHSRCGNAFAMACVAPPNPPPTSTRE 53
TT GRS T+H GNA A+ CV P PPPTST +
Sbjct: 104 TT*GRSITVHLMRGNALAITCVPAPLPPPTSTSD 3
Score = 36.3 bits (73), Expect(3) = 1e-048
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3 / +1
Query: 489 YKIIPVLGTRSIIEVCP*KP 548
YKI+PVLG S+IE+ P*KP
Sbjct: 451 YKILPVLGPYSVIEIYP*KP 510
Score = 34.5 bits (69), Expect(5) = 2e-024
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2 / -2
Query: 484 VNPASKMIFFHSRSSRSTPLIVMM*RSNKHCVSTFFRSHDDDPAPTTI 341
+ PAS+ I FHS S RS P++ +M + +S F S DP +I
Sbjct: 443 LKPASENILFHSISFRSIPVMYIMNKFCMASISLIFLSPFADPLTISI 300
Score = 22.6 bits (43), Expect(5) = 2e-024
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2 / -2
Query: 547 GFYGQTSIMDRVPRTGMIL* 488
GF+G SI + P TG IL*
Sbjct: 509 GFHG*ISITE*GPNTGRIL* 450
Score = 21.7 bits (41), Expect(5) = 2e-024
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2 / -2
Query: 352 PTTISSIITLPP 317
P TIS +IT PP
Sbjct: 317 PLTISIMITFPP 282
>gb|BF259471.1|BF259471 HVSMEf0019D06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019D06f, mRNA sequence
Length = 587
Score = 191 bits (412), Expect = 4e-048
Identities = 80/152 (52%), Positives = 107/152 (70%)
Frame = +3 / +1
Query: 30 GTVFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFE 209
G VF GI+SL+DV GG GGA +AIAKAFP ++C+VLDLP+VVA AP + V +++GDMF+
Sbjct: 127 GDVFVGINSLIDVAGGHGGAARAIAKAFPQMKCTVLDLPHVVAEAPTNDHVSFISGDMFK 306
Query: 210 SVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNVE 389
+ ADA+FLK + HDWGD DCVKILK CK+AIP + ++ + + GS + E
Sbjct: 307 YIPPADALFLKWVFHDWGDEDCVKILKKCKEAIPPRDAGGKVIIVNMVVGSGPDEIVTRE 486
Query: 390 TQCLFDLYIMTINGVERDEREWKKIIFEAGFT 485
TQ DL+IM + GVER+E E K + +AGFT
Sbjct: 487 TQVXCDLFIMFLGGVEREEFEVKNLFMQAGFT 582
Score = 105 bits (223), Expect(3) = 2e-030
Identities = 52/94 (55%), Positives = 58/94 (61%)
Frame = -2 / -1
Query: 310 GMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGRSST 131
G+A L FFSILTQS+SPQS R ASA N+SP T GA ATT GRS+T
Sbjct: 407 GIASLHFFSILTQSSSPQSWKTHFRXRASAGGMYLNISPEINDTWSLVGASATT*GRSNT 228
Query: 130 LHSRCGNAFAMACVAPPNPPPTSTRELIPWKTVP 29
+H CGNAFA+A APP PP TS E IP T P
Sbjct: 227 VHFICGNAFAIALAAPPWPPATSISEFIPTNTSP 126
Score = 39.6 bits (80), Expect(3) = 2e-030
Identities = 22/43 (51%), Positives = 23/43 (53%)
Frame = -2 / -1
Query: 484 VNPASKMIFFHSRSSRSTPLIVMM*RSNKHCVSTFFRSHDDDP 356
VNPA FF S SSRSTP M+ RS CVS S DP
Sbjct: 581 VNPACMNKFFTSNSSRSTPPRNMINRSQXTCVSLVTISSGPDP 453
Score = 25.4 bits (49), Expect(3) = 2e-030
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2 / -1
Query: 358 PAPTTISSIITLPP 317
P PTT+ +IIT PP
Sbjct: 461 PDPTTMFTIITFPP 420
>gb|BF628874.2|BF628874 HVSMEb0009A12f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009A12f, mRNA sequence
Length = 875
Score = 187 bits (402), Expect = 8e-047
Identities = 76/130 (58%), Positives = 96/130 (73%)
Frame = +3 / +2
Query: 153 VAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVI 332
+AGAP+ T V+Y+AGDMFES+ AD VFLK I+HDW D DC+KILKNC KAI +
Sbjct: 5 IAGAPSGTDVQYIAGDMFESIPQADVVFLKWIMHDWSDDDCIKILKNCNKAIAPKDAGGK 184
Query: 333 ILDIVVGAGSSSCDRKNVETQCLFDLYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLG 512
++ + + G D K+ ETQ LFDLYIM +NG+ERDE+EWKKII AGF+ +KI P+LG
Sbjct: 185 VIIVDMVVGGGPQDLKHKETQVLFDLYIMLLNGIERDEQEWKKIIMAAGFSDFKITPILG 364
Query: 513 TRSIIEVCP* 542
RSIIE+ P*
Sbjct: 365 VRSIIELYP* 394
Score = 80.3 bits (169), Expect(3) = 2e-034
Identities = 37/62 (59%), Positives = 45/62 (72%)
Frame = -2 / -3
Query: 541 YGQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTPLIVMM*RSNKHCVSTFFRSHDD 362
+G +S++DR PR G+IL +NPA+ +IFFHS SSRS PL MM*RSNK CVS FRS
Sbjct: 393 HG*SSMIDRTPRIGVILKSLNPAAMIIFFHSCSSRSMPLRSMM*RSNKTCVSLCFRSCGP 214
Query: 361 DP 356
P
Sbjct: 213 PP 208
Score = 74.8 bits (157), Expect(3) = 2e-034
Identities = 35/51 (68%), Positives = 38/51 (74%)
Frame = -2 / -3
Query: 307 MAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPA 155
+A LQFFSIL QS+S QSCII RKT SA LSNMSPA Y T+V GAPA
Sbjct: 159 IALLQFFSILMQSSSLQSCIIHFRKTTSACGMLSNMSPAMYCTSVPLGAPA 7
Score = 28.6 bits (56), Expect(3) = 2e-034
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2 / -3
Query: 358 PAPTTISSIITLPP 317
P PTT+S+IIT PP
Sbjct: 216 PPPTTMSTIITFPP 175
>gb|BU974771.1|BU974771 HB29A24r BC Hordeum vulgare subsp. vulgare cDNA clone HB29A24
5-PRIME, mRNA sequence
Length = 667
Score = 132 bits (282), Expect(3) = 1e-046
Identities = 54/109 (49%), Positives = 74/109 (67%)
Frame = +3 / +3
Query: 156 AGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVII 335
A D +++VAGDMFES+ ADAV LK+++HDWG DCVKIL+ CK+AIPA+ +
Sbjct: 192 AADAGDDNLRFVAGDMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAIPARSAGGKV 371
Query: 336 LDIVVGAGSSSCDRKNVETQCLFDLYIMTINGVERDEREWKKIIFEAGF 482
+ I + GS D+K E + + D++ M NGVERDE EWK+I +AGF
Sbjct: 372 IIIDMVRGSLLGDKKIAEMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 518
Score = 62.5 bits (130), Expect(3) = 1e-046
Identities = 23/45 (51%), Positives = 33/45 (73%)
Frame = +3 / +3
Query: 30 GTVFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGA 164
G +F+G++SLVDVG G G T+ +AKAFP ++C+VLD P + A
Sbjct: 60 GRIFRGVTSLVDVGAGNGAGTRVVAKAFPRIKCTVLDRPQSLGQA 194
Score = 57.4 bits (119), Expect(5) = 4e-029
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -1 / -3
Query: 305 GLLAVLQYLDTVGITPVMYNRLEEDSVCRRNALEHVTG 192
G LA L+YLD V + PVM N LE+DS+ RRN +HVTG
Sbjct: 341 GFLATLKYLDAVVVAPVMQNILEQDSIRRRNGFKHVTG 228
Score = 51.0 bits (105), Expect(5) = 4e-029
Identities = 24/46 (52%), Positives = 28/46 (60%)
Frame = -2 / -1
Query: 145 GRSSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWKTVPLPHSLTT 8
GRSST+H GNA A V P P PTSTRE+ P K PL +T+
Sbjct: 175 GRSSTVHLMRGNALATTRVPAPLPAPTSTREVTPRKMRPLSTIMTS 38
Score = 43.2 bits (88), Expect(5) = 4e-029
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = -2 / -1
Query: 481 NPASKMIFFHSRSSRSTPLIVMM*RSNKHCVSTFFRSHDDDP 356
NPAS+ I FHS SSRSTPL+ + S +S F S DP
Sbjct: 517 NPASEKILFHSLSSRSTPLVHIANMSCMASISAIFLSPRRDP 392
Score = 30.4 bits (60), Expect(3) = 1e-046
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3 / +3
Query: 489 YKIIPVLGTRSIIEVCP* 542
YKI+PVLG S+IE+ P*
Sbjct: 528 YKIMPVLGPLSVIEIYP* 581
Score = 24.9 bits (48), Expect(5) = 4e-029
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1 / -3
Query: 539 WADFNYGSSAQNRYDLV 489
W D NY A +R+DLV
Sbjct: 578 WVDLNY*QGA*HRHDLV 528
Score = 23.5 bits (45), Expect(5) = 4e-029
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2 / -1
Query: 352 PTTISSIITLPP 317
P TIS IIT PP
Sbjct: 394 PLTISMIITFPP 359
>gb|AV917258.1|AV917258 AV917258 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18c14 5', mRNA sequence
Length = 582
Score = 135 bits (289), Expect(3) = 5e-046
Identities = 52/94 (55%), Positives = 67/94 (71%)
Frame = +3 / +1
Query: 30 GTVFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFE 209
G +F+G+ SL D GG G +A+ KA+PH++C+VLDLP V+ AP D V YVAGD+F
Sbjct: 13 GDIFKGLESLTDCCGGDGTTARALVKAYPHIKCTVLDLPKVIDKAPKDGVVNYVAGDLFH 192
Query: 210 SVSSADAVFLKSIIHDWGDADCVKILKNCKKAIP 311
+V S+ AV LK ++H W D DCVKIL CKKAIP
Sbjct: 193 TVPSSQAVMLKLVLHFWSDEDCVKILTQCKKAIP 294
Score = 95.0 bits (201), Expect(2) = 2e-024
Identities = 49/113 (43%), Positives = 59/113 (52%)
Frame = -2 / -2
Query: 364 DDPAPTTISSIITLPP*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATY 185
D P ++ I GMAFL + I TQS+S Q C L TA D T+ N SPAT
Sbjct: 347 DGPITMSMIIIFPPSSCGGMAFLHWVKIFTQSSSLQKCSTSLSMTA*EDGTVWNRSPAT* 168
Query: 184 FTAVSAGAPATTFGRSSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWKTVPL 26
T S GA + TFGRS+T+H CG A A P+PP S R+ P K PL
Sbjct: 167 LTTPSFGALSITFGRSNTVHLMCG*ALTRALAVVPSPPQQSVRDSSPLKMSPL 9
Score = 59.7 bits (124), Expect(3) = 5e-046
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3 / +1
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L ++T GV+R E +W+K+ EAGF YKI+ LG R +IEV P*
Sbjct: 391 LMMVTTRGVQRSENDWRKLFMEAGFKDYKIVRKLGARCVIEVYP* 525
Score = 37.3 bits (75), Expect(2) = 2e-024
Identities = 21/41 (51%), Positives = 23/41 (56%)
Frame = -2 / -2
Query: 541 YGQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTPLIV 419
YG TSI R P IL* +NPAS S S R TPL+V
Sbjct: 524 YG*TSITHRAPSFLTIL*SLNPASMNSLRQSFSLRWTPLVV 402
Score = 28.1 bits (55), Expect(3) = 5e-046
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 315 QGGKVIILDIVVG 353
+GGK+II+DIV+G
Sbjct: 304 EGGKIIIIDIVIG 342
>gb|AV922427.1|AV922427 AV922427 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18c14 3', mRNA sequence
Length = 530
Score = 135 bits (289), Expect(3) = 5e-046
Identities = 52/94 (55%), Positives = 67/94 (71%)
Frame = +3 / -2
Query: 30 GTVFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFE 209
G +F+G+ SL D GG G +A+ KA+PH++C+VLDLP V+ AP D V YVAGD+F
Sbjct: 529 GDIFKGLESLTDCCGGDGTTARALVKAYPHIKCTVLDLPKVIDKAPKDGVVNYVAGDLFH 350
Query: 210 SVSSADAVFLKSIIHDWGDADCVKILKNCKKAIP 311
+V S+ AV LK ++H W D DCVKIL CKKAIP
Sbjct: 349 TVPSSQAVMLKLVLHFWSDEDCVKILTQCKKAIP 248
Score = 93.2 bits (197), Expect(2) = 7e-024
Identities = 48/112 (42%), Positives = 58/112 (51%)
Frame = -2 / +3
Query: 364 DDPAPTTISSIITLPP*AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATY 185
D P ++ I GMAFL + I TQS+S Q C L TA D T+ N SPAT
Sbjct: 195 DGPITMSMIIIFPPSSCGGMAFLHWVKIFTQSSSLQKCSTSLSMTA*EDGTVWNRSPAT* 374
Query: 184 FTAVSAGAPATTFGRSSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWKTVP 29
T S GA + TFGRS+T+H CG A A P+PP S R+ P K P
Sbjct: 375 LTTPSFGALSITFGRSNTVHLMCG*ALTRALAVVPSPPQQSVRDSSPLKMSP 530
Score = 59.7 bits (124), Expect(3) = 5e-046
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +3 / -2
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L ++T GV+R E +W+K+ EAGF YKI+ LG R +IEV P*
Sbjct: 151 LMMVTTRGVQRSENDWRKLFMEAGFKDYKIVRKLGARCVIEVYP* 17
Score = 37.3 bits (75), Expect(2) = 7e-024
Identities = 21/41 (51%), Positives = 23/41 (56%)
Frame = -2 / +3
Query: 541 YGQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTPLIV 419
YG TSI R P IL* +NPAS S S R TPL+V
Sbjct: 18 YG*TSITHRAPSFLTIL*SLNPASMNSLRQSFSLRWTPLVV 140
Score = 28.1 bits (55), Expect(3) = 5e-046
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = +3 / -2
Query: 315 QGGKVIILDIVVG 353
+GGK+II+DIV+G
Sbjct: 238 EGGKIIIIDIVIG 200
>gb|CB877071.1|CB877071 HP03H10T HP Hordeum vulgare subsp. vulgare cDNA clone HP03H10
5-PRIME, mRNA sequence
Length = 587
Score = 132 bits (282), Expect(3) = 7e-046
Identities = 54/109 (49%), Positives = 74/109 (67%)
Frame = +3 / +2
Query: 156 AGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVII 335
A D +++VAGDMFES+ ADAV LK+++HDWG DCVKIL+ CK+AIPA+ +
Sbjct: 137 AADAGDDNLRFVAGDMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAIPARSAGGKV 316
Query: 336 LDIVVGAGSSSCDRKNVETQCLFDLYIMTINGVERDEREWKKIIFEAGF 482
+ I + GS D+K E + + D++ M NGVERDE EWK+I +AGF
Sbjct: 317 IIIDMVRGSLLGDKKIAEMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 463
Score = 60.2 bits (125), Expect(3) = 7e-046
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = +3 / +2
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGA 164
+F+G++SLVDVG G G T+ +AKAFP ++C+VLD P + A
Sbjct: 11 IFRGVTSLVDVGAGNGAGTRVVAKAFPRIKCTVLDRPQSLGQA 139
Score = 57.4 bits (119), Expect(5) = 8e-028
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -1 / -2
Query: 305 GLLAVLQYLDTVGITPVMYNRLEEDSVCRRNALEHVTG 192
G LA L+YLD V + PVM N LE+DS+ RRN +HVTG
Sbjct: 286 GFLATLKYLDAVVVAPVMQNILEQDSIRRRNGFKHVTG 173
Score = 46.4 bits (95), Expect(5) = 8e-028
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = -2 / -3
Query: 145 GRSSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWK 38
GRSST+H GNA A V P P PTSTRE+ P K
Sbjct: 120 GRSSTVHLMRGNALATTRVPAPLPAPTSTREVTPRK 13
Score = 43.2 bits (88), Expect(5) = 8e-028
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = -2 / -3
Query: 481 NPASKMIFFHSRSSRSTPLIVMM*RSNKHCVSTFFRSHDDDP 356
NPAS+ I FHS SSRSTPL+ + S +S F S DP
Sbjct: 462 NPASEKILFHSLSSRSTPLVHIANMSCMASISAIFLSPRRDP 337
Score = 30.4 bits (60), Expect(3) = 7e-046
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3 / +2
Query: 489 YKIIPVLGTRSIIEVCP* 542
YKI+PVLG S+IE+ P*
Sbjct: 473 YKIMPVLGPLSVIEIYP* 526
Score = 24.9 bits (48), Expect(5) = 8e-028
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1 / -2
Query: 539 WADFNYGSSAQNRYDLV 489
W D NY A +R+DLV
Sbjct: 523 WVDLNY*QGA*HRHDLV 473
Score = 23.5 bits (45), Expect(5) = 8e-028
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2 / -3
Query: 352 PTTISSIITLPP 317
P TIS IIT PP
Sbjct: 339 PLTISMIITFPP 304
>gb|CB879734.1|CB879734 HP03H10w HP Hordeum vulgare subsp. vulgare cDNA clone HP03H10
3-PRIME, mRNA sequence
Length = 628
Score = 132 bits (282), Expect(3) = 2e-045
Identities = 54/109 (49%), Positives = 74/109 (67%)
Frame = +3 / -1
Query: 156 AGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVII 335
A D +++VAGDMFES+ ADAV LK+++HDWG DCVKIL+ CK+AIPA+ +
Sbjct: 499 AADAGDDNLRFVAGDMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAIPARSAGGKV 320
Query: 336 LDIVVGAGSSSCDRKNVETQCLFDLYIMTINGVERDEREWKKIIFEAGF 482
+ I + GS D+K E + + D++ M NGVERDE EWK+I +AGF
Sbjct: 319 IIIDMVRGSLLGDKKIAEMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 173
Score = 58.8 bits (122), Expect(3) = 2e-045
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +3 / -1
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGA 164
+F+G++SLVDVG G G T+ AKAFP ++C+VLD P + A
Sbjct: 625 IFRGVTSLVDVGAGNGAGTRVFAKAFPRIKCTVLDRPQSLGQA 497
Score = 57.4 bits (119), Expect(5) = 1e-027
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = -1 / +2
Query: 305 GLLAVLQYLDTVGITPVMYNRLEEDSVCRRNALEHVTG 192
G LA L+YLD V + PVM N LE+DS+ RRN +HVTG
Sbjct: 350 GFLATLKYLDAVVVAPVMQNILEQDSIRRRNGFKHVTG 463
Score = 46.0 bits (94), Expect(5) = 1e-027
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = -2 / +3
Query: 145 GRSSTLHSRCGNAFAMACVAPPNPPPTSTRELIPWK 38
GRSST+H GNA A V P P PTSTRE+ P K
Sbjct: 516 GRSSTVHLMRGNALANTRVPAPLPAPTSTREVTPRK 623
Score = 43.2 bits (88), Expect(5) = 1e-027
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = -2 / +3
Query: 481 NPASKMIFFHSRSSRSTPLIVMM*RSNKHCVSTFFRSHDDDP 356
NPAS+ I FHS SSRSTPL+ + S +S F S DP
Sbjct: 174 NPASEKILFHSLSSRSTPLVHIANMSCMASISAIFLSPRRDP 299
Score = 30.4 bits (60), Expect(3) = 2e-045
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3 / -1
Query: 489 YKIIPVLGTRSIIEVCP* 542
YKI+PVLG S+IE+ P*
Sbjct: 163 YKIMPVLGPLSVIEIYP* 110
Score = 24.9 bits (48), Expect(5) = 1e-027
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1 / +2
Query: 539 WADFNYGSSAQNRYDLV 489
W D NY A +R+DLV
Sbjct: 113 WVDLNY*QGA*HRHDLV 163
Score = 23.5 bits (45), Expect(5) = 1e-027
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2 / +3
Query: 352 PTTISSIITLPP 317
P TIS IIT PP
Sbjct: 297 PLTISMIITFPP 332
>gb|AW982411.2|AW982411 HVSMEg0003D05f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003D05f, mRNA sequence
Length = 1041
Score = 173 bits (372), Expect = 1e-042
Identities = 70/121 (57%), Positives = 91/121 (75%)
Frame = +3 / +3
Query: 30 GTVFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFE 209
G+VF+GI SLVDV GG GGA QAI+K+FPH++CSV+DL +V+AGAP+ T V+Y+AGDMFE
Sbjct: 363 GSVFEGIGSLVDVAGGHGGAAQAISKSFPHIKCSVMDLGHVIAGAPSGTDVQYIAGDMFE 542
Query: 210 SVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNVE 389
S+ AD VFLK I+HDW D DC+KILKNC KAI + ++ + + G S D K+ E
Sbjct: 543 SIPQADVVFLKWIMHDWSDDDCIKILKNCNKAIAPKDAGGKVIIVNMVVGGSPQDLKHKE 722
Query: 390 T 392
T
Sbjct: 723 T 725
Score = 136 bits (292), Expect(2) = 1e-032
Identities = 62/93 (66%), Positives = 68/93 (73%)
Frame = -2 / -3
Query: 307 MAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGRSSTL 128
+A LQFFSIL QS+S QSCII RKT SA LSNMSPA Y T+V GAPA T+ RS TL
Sbjct: 640 IALLQFFSILMQSSSLQSCIIHFRKTTSACGMLSNMSPAMYCTSVPLGAPAMTWPRSITL 461
Query: 127 HSRCGNAFAMACVAPPNPPPTSTRELIPWKTVP 29
H CGN F +AC APP PP TSTRE IP KT+P
Sbjct: 460 HLMCGNDFDIACAAPPWPPATSTREPIPSKTLP 362
Score = 106 bits (226), Expect = 2e-022
Identities = 45/91 (49%), Positives = 63/91 (69%)
Frame = -1 / -2
Query: 299 LAVLQYLDTVGITPVMYNRLEEDSVCRRNALEHVTGDILHGGISRSAGDDVREI*HAALQ 120
+A+ Y D V + P+M+N L +D++C NAL+HV ++LH G +RS G+D+ E+ HAAL
Sbjct: 632 IAIF*YFDAVIVAPIMHNPL*KDNICLWNALKHVARNVLHVGATRSPGNDMAEVHHAALD 453
Query: 119 VRERFRDGLCGATKPAADVDEGADPLEDGAA 27
VRERFR LC T + +VD+GA LED AA
Sbjct: 452 VRERFRYCLCRPTMASGNVDQGAYTLEDAAA 360
Score = 23.1 bits (44), Expect(2) = 1e-032
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2 / -3
Query: 352 PTTISSIITLPP 317
PTT+ +IIT PP
Sbjct: 691 PTTMFTIITFPP 656
>gb|BJ457207.1|BJ457207 BJ457207 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak26l07 3', mRNA sequence
Length = 565
Score = 131 bits (280), Expect(3) = 2e-042
Identities = 55/108 (50%), Positives = 77/108 (71%)
Frame = +3 / -3
Query: 162 APADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILD 341
A D + +VAGDMF+S+ SADAV LK+I+HDWG DCVKILK CK+AIPA+ ++
Sbjct: 467 AAGDDILSFVAGDMFQSIPSADAVLLKNILHDWGHDDCVKILKCCKEAIPARNAGGKVII 288
Query: 342 IVVGAGSSSCDRKNVETQCLFDLYIMTINGVERDEREWKKIIFEAGFT 485
I + GS++ DRK E + + +L++M I G+ER+E EWK I +AGF+
Sbjct: 287 IDMVRGSANGDRKINEMEAIQNLFMMYITGIERNEIEWKXIFSDAGFS 144
Score = 47.3 bits (97), Expect(3) = 2e-042
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +3 / -3
Query: 75 GFGGATQAIAKAFPHLECSVLDLPNVVAGAPA 170
G G TQ IAKAFP ++C+V+DLP+VV A
Sbjct: 563 GNGAGTQVIAKAFPRIKCTVMDLPHVVVSGQA 468
Score = 32.2 bits (64), Expect(3) = 2e-042
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3 / -3
Query: 489 YKIIPVLGTRSIIEVCP*KP 548
Y I PVLG S+IE+ P*KP
Sbjct: 137 YXIXPVLGPYSVIEIYP*KP 78
>emb|X77467.1|HVOMET H.vulgare L. mRNA for flavonoid 7-O-methyltransferase
Length = 1402
Score = 127 bits (271), Expect(3) = 6e-042
Identities = 51/91 (56%), Positives = 66/91 (72%)
Frame = +3 / +1
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
VF GI SLVDV GG G + IA+AFP+++CSVLDLP V+ G + V++VAGDM E V
Sbjct: 706 VFAGIKSLVDVAGGNGTTARTIAEAFPYVKCSVLDLPQVIQGISSHGTVEFVAGDMMEFV 885
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAI 308
A+AV LK ++H+W D DCVKIL C++AI
Sbjct: 886 PPAEAVLLKYVLHNWSDQDCVKILTRCREAI 978
Score = 76.2 bits (160), Expect(3) = 4e-023
Identities = 44/91 (48%), Positives = 48/91 (52%)
Frame = -2 / -3
Query: 307 MAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGRSSTL 128
MA L +I TQS S Q C LR+TASA T S MSPAT T P T GRS+T
Sbjct: 977 MASLHRVNIFTQS*SLQLCSTYLRRTASAGGTNSIMSPATNSTVP*EEIPCITCGRSNTE 798
Query: 127 HSRCGNAFAMACVAPPNPPPTSTRELIPWKT 35
H G A AM P PP TST + IP T
Sbjct: 797 HLT*GKASAMVLAVVPFPPATSTSDFIPANT 705
Score = 57.4 bits (119), Expect(3) = 6e-042
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +3 / +1
Query: 414 IMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
+M NG R+E+ W KI EAGF+ YKI VLG RS+IEV P*
Sbjct: 1081 MMLFNGKVREEQNWHKIFLEAGFSHYKIHNVLGMRSLIEVQP* 1209
Score = 44.6 bits (91), Expect(3) = 4e-023
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -2 / -3
Query: 541 YGQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTPL 425
YG TS+ DR+PRT IL* +NPAS+ I SSR+ PL
Sbjct: 1208 YGWTSMRDRIPRTL*IL**LNPASRNILCQFCSSRTLPL 1092
Score = 24.9 bits (48), Expect(3) = 6e-042
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3 / +1
Query: 315 QGGKVIILDIVVGAGS 362
+ GKVII+D VVG+ S
Sbjct: 991 KAGKVIIIDTVVGSPS 1038
Score = 24.4 bits (47), Expect(3) = 4e-023
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 352 PTTISSIITLP 320
PTT+S IITLP
Sbjct: 1028 PTTVSMIITLP 996
>gb|BJ467760.1|BJ467760 BJ467760 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29l10 3', mRNA sequence
Length = 779
Score = 133 bits (284), Expect(2) = 8e-041
Identities = 53/112 (47%), Positives = 73/112 (65%)
Frame = +3 / -2
Query: 30 GTVFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFE 209
G +F+G+ SL D GG G +A+ KA+PH++C+VLDLP VV APAD + YVAGD+F
Sbjct: 718 GDIFKGLDSLTDCCGGDGTTARALVKAYPHIKCTVLDLPKVVEKAPADGVINYVAGDLFH 539
Query: 210 SVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSS 365
+V + V LK ++H W D DCVKIL C+KAIP + ++ I + G S
Sbjct: 538 TVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVGPS 383
Score = 90.0 bits (190), Expect(3) = 2e-023
Identities = 46/99 (46%), Positives = 54/99 (54%)
Frame = -2 / +3
Query: 310 GMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGRSST 131
GMAFL + I TQS+S Q C L T T+ N SPAT SAGA +TTFGRS+T
Sbjct: 438 GMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LMTPSAGAFSTTFGRSNT 617
Query: 130 LHSRCGNAFAMACVAPPNPPPTSTRELIPWKTVPLPHSL 14
+H CG A A P+PP S RE P K P S+
Sbjct: 618 VHLMCG*ALTRALAVVPSPPQQSVRESSPLKMSPHSRSM 734
Score = 54.2 bits (112), Expect(2) = 8e-041
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +3 / -2
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L ++ G +RDE W ++ +AGFT YKI+ LG RS+IEV P*
Sbjct: 340 LMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP* 206
Score = 30.4 bits (60), Expect(3) = 2e-023
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -2 / +3
Query: 541 YGQTSIMDRVPRTGMIL*DVNPA 473
YG TS+ DR P IL* VNPA
Sbjct: 207 YG*TSMTDRAPNFFTIL*SVNPA 275
Score = 26.3 bits (51), Expect(3) = 2e-023
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2 / +3
Query: 352 PTTISSIITLPP 317
PTTIS IIT PP
Sbjct: 390 PTTISMIITFPP 425
>gb|BJ462654.1|BJ462654 BJ462654 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29l10 5', mRNA sequence
Length = 720
Score = 133 bits (284), Expect(2) = 8e-041
Identities = 53/112 (47%), Positives = 73/112 (65%)
Frame = +3 / +2
Query: 30 GTVFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFE 209
G +F+G+ SL D GG G +A+ KA+PH++C+VLDLP VV APAD + YVAGD+F
Sbjct: 191 GDIFKGLDSLTDCCGGDGTTARALVKAYPHIKCTVLDLPKVVEKAPADGVINYVAGDLFH 370
Query: 210 SVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSS 365
+V + V LK ++H W D DCVKIL C+KAIP + ++ I + G S
Sbjct: 371 TVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVGPS 526
Score = 90.0 bits (190), Expect(3) = 2e-023
Identities = 46/99 (46%), Positives = 54/99 (54%)
Frame = -2 / -1
Query: 310 GMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGRSST 131
GMAFL + I TQS+S Q C L T T+ N SPAT SAGA +TTFGRS+T
Sbjct: 471 GMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LMTPSAGAFSTTFGRSNT 292
Query: 130 LHSRCGNAFAMACVAPPNPPPTSTRELIPWKTVPLPHSL 14
+H CG A A P+PP S RE P K P S+
Sbjct: 291 VHLMCG*ALTRALAVVPSPPQQSVRESSPLKMSPHSRSM 175
Score = 54.2 bits (112), Expect(2) = 8e-041
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +3 / +2
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L ++ G +RDE W ++ +AGFT YKI+ LG RS+IEV P*
Sbjct: 569 LMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP* 703
Score = 30.4 bits (60), Expect(3) = 2e-023
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -2 / -1
Query: 541 YGQTSIMDRVPRTGMIL*DVNPA 473
YG TS+ DR P IL* VNPA
Sbjct: 702 YG*TSMTDRAPNFFTIL*SVNPA 634
Score = 26.3 bits (51), Expect(3) = 2e-023
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2 / -1
Query: 352 PTTISSIITLPP 317
PTTIS IIT PP
Sbjct: 519 PTTISMIITFPP 484
>gb|AL503735.1|AL503735 AL503735 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03D24T 5', mRNA sequence
Length = 700
Score = 129 bits (276), Expect(3) = 1e-040
Identities = 50/94 (53%), Positives = 65/94 (69%)
Frame = +3 / +1
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F+G+ SL D GG G +AI KA PH++C+VLDLP V+ P+D V YVAGD+F +V
Sbjct: 49 LFKGLESLTDCCGGDGKTARAITKAHPHVKCTVLDLPKVIEKTPSDCVVNYVAGDLFHTV 228
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQ 317
A AV LK ++H W D DCVKIL CK AIP++
Sbjct: 229 PKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSR 330
Score = 49.6 bits (102), Expect(3) = 1e-040
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3 / +1
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEV 533
L ++ G +R E +W+ + +AGFT YKII +G R +IEV
Sbjct: 421 LMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEV 546
Score = 25.8 bits (50), Expect(3) = 1e-040
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +3 / +1
Query: 315 QGGKVIILDIVV 350
+GGKVI++DIVV
Sbjct: 334 EGGKVIVIDIVV 369
>gb|CD662493.1|CD662493 UCRHV18_01ch06_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_01ch06, mRNA sequence
Length = 865
Score = 131 bits (280), Expect(2) = 8e-040
Identities = 52/111 (46%), Positives = 73/111 (65%)
Frame = +3 / -1
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F+G+ SL D GG G +AI KAFPH++C+VLDLP V+ P+D V YVAGD+F ++
Sbjct: 799 LFKGVQSLTDCCGGDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDGIVNYVAGDLFHAI 620
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
A + LK ++H W D DC+ IL CKKAIP++ ++ I + GSSS
Sbjct: 619 PPAQVLMLKLVLHFWSDEDCINILAQCKKAIPSREMGGKVIVIDIVVGSSS 467
Score = 52.8 bits (109), Expect(2) = 8e-040
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3 / -1
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L ++ G +RDE +W I +AGF+ YKI+ LG R +IEV P*
Sbjct: 430 LMLVCTRGRQRDENDWSTIFTKAGFSGYKIVKKLGPRGVIEVYP* 296
>gb|BI956571.1|BI956571 HVSMEn0004D06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0004D06f, mRNA sequence
Length = 780
Score = 161 bits (347), Expect = 3e-039
Identities = 62/91 (68%), Positives = 77/91 (84%)
Frame = +3 / +3
Query: 30 GTVFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFE 209
G+VF+GI SLVDV GG GGA QAI+K+FPH++CSV+DL +V+AGAP+ T V+Y+AGDMFE
Sbjct: 381 GSVFEGIGSLVDVAGGHGGAAQAISKSFPHIKCSVMDLGHVIAGAPSGTDVQYIAGDMFE 560
Query: 210 SVSSADAVFLKSIIHDWGDADCVKILKNCKK 302
S+ AD VFLK I+HDW D DC+KILKNC K
Sbjct: 561 SIPQADVVFLKWIMHDWSDDDCIKILKNCIK 653
Score = 136 bits (292), Expect = 1e-031
Identities = 61/92 (66%), Positives = 68/92 (73%)
Frame = -2 / -3
Query: 304 AFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGRSSTLH 125
+F+QFFSIL QS+S QSCII RKT SA LSNMSPA Y T+V GAPA T+ RS TLH
Sbjct: 655 SFMQFFSILMQSSSLQSCIIHFRKTTSACGMLSNMSPAMYCTSVPLGAPAMTWPRSITLH 476
Query: 124 SRCGNAFAMACVAPPNPPPTSTRELIPWKTVP 29
CGN F +AC APP PP TSTRE IP KT+P
Sbjct: 475 LMCGNDFDIACAAPPWPPATSTREPIPSKTLP 380
Score = 108 bits (231), Expect = 3e-023
Identities = 47/92 (51%), Positives = 63/92 (68%)
Frame = -1 / -2
Query: 302 LLAVLQYLDTVGITPVMYNRLEEDSVCRRNALEHVTGDILHGGISRSAGDDVREI*HAAL 123
L A+ Y D V + P+M+N L ED++C NAL+HV ++LH G +RS G+D+ E+ HAAL
Sbjct: 653 LYAIF*YFDAVIVAPIMHNPL*EDNICLWNALKHVARNVLHVGATRSPGNDMAEVHHAAL 474
Query: 122 QVRERFRDGLCGATKPAADVDEGADPLEDGAA 27
VRERFR LC T + +VD+GA LED AA
Sbjct: 473 DVRERFRYCLCRPTMASGNVDQGAYTLEDAAA 378
>gb|CD662288.1|CD662288 UCRHV18_01aa10_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_01aa10, mRNA sequence
Length = 792
Score = 127 bits (273), Expect(2) = 7e-039
Identities = 51/109 (46%), Positives = 71/109 (65%)
Frame = +3 / -3
Query: 42 QGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSS 221
+G+ SL D GG G +AI KAFPH++C+VLDLP V+ P+D V YVAGD+F ++
Sbjct: 790 KGVQSLTDCCGGDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDGIVNYVAGDLFHAIPP 611
Query: 222 ADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
A + LK ++H W D DC+ IL CKKAIP++ ++ I + GSSS
Sbjct: 610 AQVLMLKLVLHFWSDEDCINILAQCKKAIPSREMGGKVIVIDIVVGSSS 464
Score = 52.8 bits (109), Expect(2) = 7e-039
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3 / -3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L ++ G +RDE +W I +AGF+ YKI+ LG R +IEV P*
Sbjct: 427 LMLVCTRGRQRDENDWSTIFTKAGFSGYKIVKKLGPRGVIEVYP* 293
>gb|CD663812.1|CD663812 UCRHV18_06ch08_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_06ch08, mRNA sequence
Length = 791
Score = 127 bits (273), Expect(2) = 7e-039
Identities = 51/109 (46%), Positives = 71/109 (65%)
Frame = +3 / -3
Query: 42 QGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSS 221
+G+ SL D GG G +AI KAFPH++C+VLDLP V+ P+D V YVAGD+F ++
Sbjct: 789 KGVQSLTDCCGGDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDGIVNYVAGDLFHAIPP 610
Query: 222 ADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
A + LK ++H W D DC+ IL CKKAIP++ ++ I + GSSS
Sbjct: 609 AQVLMLKLVLHFWSDEDCINILAQCKKAIPSREMGGKVIVIDIVVGSSS 463
Score = 52.8 bits (109), Expect(2) = 7e-039
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3 / -3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L ++ G +RDE +W I +AGF+ YKI+ LG R +IEV P*
Sbjct: 426 LMLVCTRGRQRDENDWSTIFTKAGFSGYKIVKKLGPRGVIEVYP* 292
>gb|AV930320.1|AV930320 AV930320 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22a15 3', mRNA sequence
Length = 664
Score = 123 bits (264), Expect(2) = 6e-038
Identities = 50/105 (47%), Positives = 68/105 (64%)
Frame = +3 / -3
Query: 54 SLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAV 233
SL D GG G +AI KAFPH++C+VLDLP V+ P+D V YVAGD+F ++ A +
Sbjct: 659 SLTDCCGGDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDGIVNYVAGDLFHAIPPAQVL 480
Query: 234 FLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
LK ++H W D DC+ IL CKKAIP++ ++ I + GSSS
Sbjct: 479 MLKLVLHFWSDEDCINILSQCKKAIPSREMGGKVIVIDIVVGSSS 345
Score = 53.8 bits (111), Expect(2) = 6e-038
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3 / -3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L ++ G +RDE +W I +AGF+ YKI+ LG R IIEV P*
Sbjct: 308 LMLVCTKGRQRDENDWSTIFTKAGFSDYKIVKKLGARGIIEVYP* 174
>gb|BF259348.2|BF259348 HVSMEf0019F16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019F16f, mRNA sequence
Length = 574
Score = 128 bits (275), Expect(2) = 2e-037
Identities = 53/110 (48%), Positives = 71/110 (64%)
Frame = +3 / +3
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F G+ SL D GG G +AI KAFPH++C+VLDLP V+ P+D V YVAGD+ +V
Sbjct: 75 LFDGLQSLTDCCGGDGTTARAIVKAFPHIKCNVLDLPKVIDKVPSDGVVNYVAGDLLHTV 254
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSS 365
A AV LK ++H W D DC+ IL CKKAIP++ ++ I + GSS
Sbjct: 255 PPAQAVMLKLVLHFWSDEDCINILAQCKKAIPSREMGGKVIIIDIVLGSS 404
Score = 47.3 bits (97), Expect(2) = 2e-037
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3 / +3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEV 533
L + G +R+E+EW + +AGF+ Y+II LG R +IEV
Sbjct: 444 LMFICTRGRQRNEKEWSMLFMKAGFSDYEIIKKLGHRGVIEV 569
>gb|AV836790.1|AV836790 AV836790 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd3c22, mRNA
sequence
Length = 696
Score = 134 bits (288), Expect(2) = 4e-037
Identities = 57/109 (52%), Positives = 73/109 (66%)
Frame = +3 / -2
Query: 69 GGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSI 248
GG G AT IAKAFPH++C+VLDLP VVAGAPA V +V GDMFES+ AD V LK I
Sbjct: 560 GGAHGTATAIIAKAFPHVKCTVLDLPRVVAGAPALDNVIFVPGDMFESIPPADTVLLKCI 381
Query: 249 IHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNVETQ 395
+HDW D DC+KIL+ CKKAIP + ++ + + GS ++ V +
Sbjct: 380 LHDWPDEDCIKILRQCKKAIPVRDAGGKVIIMDMVVGSVGPQQETVSKE 234
Score = 103 bits (219), Expect(2) = 3e-024
Identities = 42/75 (56%), Positives = 57/75 (76%)
Frame = +3 / -2
Query: 318 GGKVIILDIVVGAGSSSCDRKNVETQCLFDLYIMTINGVERDEREWKKIIFEAGFTSYKI 497
GGKVII+D+VVG+ + + E + LFD+++M I+G++R+E EW+KI FEAGF+ YKI
Sbjct: 305 GGKVIIMDMVVGSVGPQQETVSKEAEVLFDVFMMYIDGIQREEHEWRKIFFEAGFSDYKI 126
Query: 498 IPVLGTRSIIEVCP* 542
PV G RSIIEV P*
Sbjct: 125 TPVTGIRSIIEVYP* 81
Score = 101 bits (216), Expect(3) = 5e-036
Identities = 50/81 (61%), Positives = 53/81 (65%)
Frame = -2 / +1
Query: 310 GMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGRSST 131
GMAFL SIL QS+S QSC + L KT SA SNMSP T T AGAPATT GRSST
Sbjct: 319 GMAFLH*RSILMQSSSGQSCKMHLSKTVSAGGMDSNMSPGTKITLSRAGAPATTRGRSST 498
Query: 130 LHSRCGNAFAMACVAPPNPPP 68
+H CGNA AM VA P PP
Sbjct: 499 VHLTCGNALAMIAVAVPWAPP 561
Score = 61.1 bits (127), Expect(3) = 5e-036
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = -2 / +1
Query: 538 GQTSIMDRVPRTGMIL*DVNPASKMIFFHSRSSRSTPLIVMM*RSNKHCVS 386
G TSI++R+P TG+IL* +NPASK IF HS SSR P + +M SNK S
Sbjct: 85 G*TSIIERIPVTGVIL*SLNPASKKIFLHSCSSRWIPSMYIMKTSNKTSAS 237
Score = 40.0 bits (81), Expect(2) = 4e-037
Identities = 25/56 (44%), Positives = 33/56 (58%)
Frame = +2 / -1
Query: 386 GDAMLV*SLHHDYQRCRAR*ARVEEDHL*SRVYILQDHTCSGHSIHN*SLPIETNI 553
G V LH ++R AR A VEED L*S V LQD++ S++ *SLP+ N+
Sbjct: 237 GGGGFVRCLHDVHRRDPARGA*VEEDFL*SWV*RLQDYSRDRDSLNY*SLPLNINL 70
Score = 28.6 bits (56), Expect(2) = 3e-024
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1 / -3
Query: 199 TCSRAFRRQTLSSSSRLYMTGVMPTVSRY*RTARRP 306
TCS R+T SS M G SRY +AR+P
Sbjct: 430 TCSSPSHRRTPFYSSAFCMIGQTKIASRYCVSARKP 323
Score = 26.3 bits (51), Expect(3) = 5e-036
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 352 PTTISSIITLPP 317
PTTIS IIT PP
Sbjct: 271 PTTISMIITFPP 306
>gb|AL503330.1|AL503330 AL503330 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01K22T 5', mRNA sequence
Length = 700
Score = 129 bits (276), Expect(3) = 4e-037
Identities = 50/94 (53%), Positives = 65/94 (69%)
Frame = +3 / +1
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F+G+ SL D GG G +AI KA PH++C+VLDLP V+ P+D V YVAGD+F +V
Sbjct: 232 LFKGLESLTDCCGGDGKTARAITKAHPHVKCTVLDLPKVIEKTPSDCVVNYVAGDLFHTV 411
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQ 317
A AV LK ++H W D DCVKIL CK AIP++
Sbjct: 412 PKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSR 513
Score = 37.7 bits (76), Expect(3) = 4e-037
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3 / +1
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKII 500
L ++ G +R E +W+ + +AGFT YKII
Sbjct: 604 LMLVFTRGRQRSENDWRDLFMKAGFTDYKII 696
Score = 25.8 bits (50), Expect(3) = 4e-037
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +3 / +1
Query: 315 QGGKVIILDIVV 350
+GGKVI++DIVV
Sbjct: 517 EGGKVIVIDIVV 552
>gb|AV918157.1|AV918157 AV918157 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20b03 3', mRNA sequence
Length = 676
Score = 96.4 bits (204), Expect(4) = 2e-036
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = +3 / -1
Query: 123 ECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKK 302
+C+VLDLP V+ P+D V YVAGD+F +V A AV LK ++H W D DCVKIL CK
Sbjct: 559 KCTVLDLPKVIEKTPSDCVVNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKN 380
Query: 303 AIPAQ 317
AIP++
Sbjct: 379 AIPSR 365
Score = 49.6 bits (102), Expect(4) = 2e-036
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3 / -1
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEV 533
L ++ G +R E +W+ + +AGFT YKII +G R +IEV
Sbjct: 274 LMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEV 149
Score = 36.3 bits (73), Expect(4) = 2e-036
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3 / -3
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLE 125
+F+G+ SL D GG G +AI KA PH++
Sbjct: 647 LFKGLESLTDCCGGDGKTARAITKAHPHVK 558
Score = 25.8 bits (50), Expect(4) = 2e-036
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +3 / -1
Query: 315 QGGKVIILDIVV 350
+GGKVI++DIVV
Sbjct: 361 EGGKVIVIDIVV 326
>gb|BM817346.1|BM817346 HC111F01_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC111F01_T3.ab1 similar to Hexaprenyldihydroxybenzoate
methyltransferase,Apigenin
4'-O-methyltransferase,[Myelin basic protein]-arginine
N-methyltransferase,Catechol
O-methyltransferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 905
Score = 124 bits (265), Expect(3) = 1e-035
Identities = 49/93 (52%), Positives = 64/93 (68%)
Frame = +3 / +3
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F+G+ SL D GG G +AI KA PH++C+VLDLP V+ AP+D V VAGD+F SV
Sbjct: 255 LFKGLESLTDCCGGDGTTARAITKAHPHVKCTVLDLPKVIDKAPSDGIVNCVAGDLFHSV 434
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPA 314
+ AV LK ++H W D DCVKIL C+ AIP+
Sbjct: 435 PKSQAVMLKLVLHHWSDEDCVKILSQCRDAIPS 533
Score = 34.5 bits (69), Expect(3) = 1e-035
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3 / +3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTR 518
L ++ +R E +W ++ +AGF+ YKI+ L R
Sbjct: 627 LMLVNTKSRQRTENDWHELFMKAGFSDYKIVKKLRAR 737
Score = 29.0 bits (57), Expect(3) = 1e-035
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +3 / +3
Query: 315 QGGKVIILDIVVG 353
+GGKVII+DIVVG
Sbjct: 540 EGGKVIIIDIVVG 578
>gb|BJ466406.1|BJ466406 BJ466406 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31p18 3', mRNA sequence
Length = 613
Score = 111 bits (237), Expect(3) = 2e-035
Identities = 42/75 (56%), Positives = 54/75 (72%)
Frame = +3 / -2
Query: 93 QAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDAD 272
+AI KA PH++C+VLDLP V+ P+D V YVAGD+F +V A AV LK ++H W D D
Sbjct: 603 RAITKAHPHVKCTVLDLPKVIEKTPSDCVVNYVAGDLFHTVPKAQAVMLKLVLHHWSDDD 424
Query: 273 CVKILKNCKKAIPAQ 317
CVKIL CK AIP++
Sbjct: 423 CVKILTQCKNAIPSR 379
Score = 49.6 bits (102), Expect(3) = 2e-035
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3 / -2
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEV 533
L ++ G +R E +W+ + +AGFT YKII +G R +IEV
Sbjct: 288 LMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEV 163
Score = 25.8 bits (50), Expect(3) = 2e-035
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +3 / -2
Query: 315 QGGKVIILDIVV 350
+GGKVI++DIVV
Sbjct: 375 EGGKVIVIDIVV 340
>gb|CB879386.1|CB879386 HP02A07w HP Hordeum vulgare subsp. vulgare cDNA clone HP02A07
3-PRIME, mRNA sequence
Length = 539
Score = 131 bits (280), Expect(2) = 2e-035
Identities = 52/111 (46%), Positives = 73/111 (65%)
Frame = +3 / -2
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F+G+ SL D GG G +AI KAFPH++C+VLDLP V+ P+D V YVAGD+F ++
Sbjct: 469 LFKGVQSLTDCCGGDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDGIVNYVAGDLFHAI 290
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
A + LK ++H W D DC+ IL CKKAIP++ ++ I + GSSS
Sbjct: 289 PPAQVLMLKLVLHFWSDEDCINILAQCKKAIPSREMGGKVIVIDIVVGSSS 137
Score = 37.7 bits (76), Expect(2) = 2e-035
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3 / -2
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKII 500
L ++ G +RDE +W I +AGF+ YKI+
Sbjct: 100 LMLVCTRGRQRDENDWSTIFTKAGFSGYKIV 8
>gb|BF264626.3|BF264626 HV_CEa0009O22f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009O22f, mRNA sequence
Length = 877
Score = 135 bits (290), Expect(2) = 3e-035
Identities = 54/109 (49%), Positives = 75/109 (68%)
Frame = +3 / +1
Query: 156 AGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVII 335
A D +++VAGDMFES+ ADAV LK+++HDWG DCVKIL+ CK+A+PA+ +
Sbjct: 16 AADAGDDNLRFVAGDMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAVPARSAGGKV 195
Query: 336 LDIVVGAGSSSCDRKNVETQCLFDLYIMTINGVERDEREWKKIIFEAGF 482
+ I +G GS D+K E + + D++ M NGVERDE EWK+I +AGF
Sbjct: 196 IIIDMGRGSLLGDKKIAEMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 342
Score = 32.7 bits (65), Expect(2) = 3e-035
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3 / +1
Query: 489 YKIIPVLGTRSIIEVCP*K 545
YKI+PVLG S+IE+ P*K
Sbjct: 352 YKIMPVLGPLSVIEIYP*K 408
>gb|BM817329.1|BM817329 HC105E06_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC105E06_T3.ab1 similar to Hexaprenyldihydroxybenzoate
methyltransferase,(S)-scoulerine 9-O-methyltransferase,
mRNA sequence
Length = 885
Score = 146 bits (313), Expect = 2e-034
Identities = 61/115 (53%), Positives = 80/115 (69%)
Frame = +3 / +3
Query: 51 SSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADA 230
SSL+DVGG G AT IAKAFPH++C+VLDLP VVAGAPA V +V GDMFE + AD
Sbjct: 291 SSLIDVGGAHGTATAIIAKAFPHVKCTVLDLPRVVAGAPAHDNVIFVPGDMFEYIPPADT 470
Query: 231 VFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDRKNVETQ 395
V LK I+HDW D DC+K+L+ CKKAIPA+ ++ + + GS+ ++ V +
Sbjct: 471 VLLKWILHDWPDDDCIKVLRQCKKAIPARDAGGKVIIMDMVVGSAGPQQETVSKE 635
Score = 109 bits (232), Expect(3) = 3e-032
Identities = 54/88 (61%), Positives = 57/88 (64%)
Frame = -2 / -3
Query: 313 AGMAFLQFFSILTQSASPQSCIIDLRKTASADETLSNMSPATYFTAVSAGAPATTFGRSS 134
AGMAFL S L QS+S QSC I L +T SA SNMSP T T AGAPATT GRSS
Sbjct: 553 AGMAFLH*RSTLMQSSSGQSCKIHLSRTVSAGGMYSNMSPGTKITLSWAGAPATTRGRSS 374
Query: 133 TLHSRCGNAFAMACVAPPNPPPTSTREL 50
T+H CGNA AM VA P PPTS EL
Sbjct: 373 TVHLTCGNALAMIAVAVPWAPPTSISEL 290
Score = 37.3 bits (75), Expect(3) = 3e-032
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -2 / -3
Query: 496 IL*DVNPASKMIFFHSRSSRSTPLIVMM*RSN 401
IL* +NPA K IF HS SSR P + +M SN
Sbjct: 742 IL*SLNPAXKKIFLHSCSSRWIPSMYIMKTSN 647
Score = 29.9 bits (59), Expect(3) = 3e-032
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = -1 / -2
Query: 428 VDSHDVEIKQALRLHVLPVARRRSCSNHDIQYYHLAS 318
VD H +I+ LRL R S SNH I YHL S
Sbjct: 674 VDVHHEDIEXNLRLLRHGFLLRPSRSNHHIHDYHLPS 564
>gb|BQ662115.1|BQ662115 HR01K01u HR Hordeum vulgare subsp. vulgare cDNA clone HR01K01
3-PRIME, mRNA sequence
Length = 528
Score = 114 bits (243), Expect(2) = 2e-034
Identities = 46/91 (50%), Positives = 62/91 (68%)
Frame = +3 / -2
Query: 93 QAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDAD 272
+AI KAFPH++C+VLDLP V+ P+D V YVAGD+F +V A AV LK ++H W D D
Sbjct: 527 RAIVKAFPHIKCNVLDLPKVIDKVPSDGVVNYVAGDLFHTVPPAQAVMLKLVLHFWSDED 348
Query: 273 CVKILKNCKKAIPAQGGKVIILDIVVGAGSS 365
C+ IL CKKAIP++ ++ I + GSS
Sbjct: 347 CINILAQCKKAIPSREMGGKVIIIDIVLGSS 255
Score = 51.9 bits (107), Expect(2) = 2e-034
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3 / -2
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L + G +R+E+EW + +AGF+ YKII LG R +IEV P*
Sbjct: 215 LMFICTRGRQRNEKEWSMLFMKAGFSDYKIIKKLGHRGVIEVYP* 81
>gb|BF253847.2|BF253847 HVSMEf0002E15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002E15f, mRNA sequence
Length = 822
Score = 137 bits (293), Expect(2) = 3e-034
Identities = 53/95 (55%), Positives = 68/95 (71%)
Frame = +3 / +1
Query: 30 GTVFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFE 209
G +F+G+ SL D GG G +A+ KA+PH++C+VLDLP V+ AP D V YVAGD+F
Sbjct: 118 GDIFKGLESLTDCCGGDGTTARALVKAYPHIKCTVLDLPKVIDKAPKDGVVNYVAGDLFH 297
Query: 210 SVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPA 314
+V S+ AV LK ++H W D DCVKIL CKKAIPA
Sbjct: 298 TVPSSQAVMLKLVLHFWSDEDCVKILTQCKKAIPA 402
Score = 28.1 bits (55), Expect(2) = 3e-034
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 315 QGGKVIILDIVVG 353
+GGK+II+DIV+G
Sbjct: 409 EGGKIIIIDIVIG 447
>gb|AV928262.1|AV928262 AV928262 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27k15 3', mRNA sequence
Length = 728
Score = 112 bits (240), Expect(2) = 4e-034
Identities = 47/97 (48%), Positives = 63/97 (64%)
Frame = +3 / -2
Query: 75 GFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIH 254
G G +AI KAF H++C+VLDLP V+ P+D V YVAGD+F +V A AV LK ++H
Sbjct: 727 GDGTTARAIVKAFLHIKCNVLDLPKVIDKVPSDGVVNYVAGDLFHTVPPAQAVMLKLVLH 548
Query: 255 DWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSS 365
W D DC+ IL CKKAIP++ ++ I + GSS
Sbjct: 547 FWSDEDCINILAQCKKAIPSREMGGKVIIIDIVLGSS 437
Score = 51.9 bits (107), Expect(2) = 4e-034
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3 / -2
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L + G +R+E+EW + +AGF+ YKII LG R +IEV P*
Sbjct: 397 LMFICTRGRQRNEKEWSMLFMKAGFSDYKIIKKLGHRGVIEVYP* 263
>gb|AV929439.1|AV929439 AV929439 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14d20 3', mRNA sequence
Length = 670
Score = 110 bits (234), Expect(2) = 3e-033
Identities = 44/87 (50%), Positives = 59/87 (67%)
Frame = +3 / -3
Query: 105 KAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKI 284
KAFPH++C+VLDLP V+ P+D V YVAGD+F +V A AV LK ++H W D DC+ I
Sbjct: 668 KAFPHIKCNVLDLPKVIDKVPSDGVVNYVAGDLFHTVPPAQAVMLKLVLHFWSDEDCINI 489
Query: 285 LKNCKKAIPAQGGKVIILDIVVGAGSS 365
L CKKAIP++ ++ I + GSS
Sbjct: 488 LAQCKKAIPSREMGGKVIIIDIVLGSS 408
Score = 51.9 bits (107), Expect(2) = 3e-033
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3 / -3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L + G +R+E+EW + +AGF+ YKII LG R +IEV P*
Sbjct: 368 LMFICTRGRQRNEKEWSMLFMKAGFSDYKIIKKLGHRGVIEVYP* 234
>gb|AV930452.1|AV930452 AV930452 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22j14 3', mRNA sequence
Length = 692
Score = 106 bits (226), Expect(2) = 2e-032
Identities = 41/87 (47%), Positives = 58/87 (66%)
Frame = +3 / -1
Query: 108 AFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKIL 287
AFPH++C+VLDLP V+ P+D V YVAGD+F ++ A + LK ++H W D DC+ IL
Sbjct: 692 AFPHIKCNVLDLPKVIEKVPSDGIVNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINIL 513
Query: 288 KNCKKAIPAQGGKVIILDIVVGAGSSS 368
CKKAIP++ ++ I + GSSS
Sbjct: 512 AQCKKAIPSREMGGKVIVIDIVVGSSS 432
Score = 52.8 bits (109), Expect(2) = 2e-032
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3 / -1
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L ++ G +RDE +W I +AGF+ YKI+ LG R +IEV P*
Sbjct: 395 LMLVCTRGRQRDENDWSTIFTKAGFSGYKIVKKLGPRGVIEVYP* 261
>gb|AV931831.1|AV931831 AV931831 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26g01 3', mRNA sequence
Length = 680
Score = 105 bits (223), Expect(2) = 2e-032
Identities = 40/86 (46%), Positives = 57/86 (66%)
Frame = +3 / -3
Query: 111 FPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILK 290
FPH++C+VLDLP V+ P+D V YVAGD+F ++ A + LK ++H W D DC+ IL
Sbjct: 678 FPHIKCNVLDLPKVIEKVPSDGIVNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILS 499
Query: 291 NCKKAIPAQGGKVIILDIVVGAGSSS 368
CKKAIP++ ++ I + GSSS
Sbjct: 498 QCKKAIPSREMGGKVIVIDIVVGSSS 421
Score = 53.8 bits (111), Expect(2) = 2e-032
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3 / -3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L ++ G +RDE +W I +AGF+ YKI+ LG R IIEV P*
Sbjct: 384 LMLVCTKGRQRDENDWSTIFTKAGFSDYKIVKKLGARGIIEVYP* 250
>gb|AV928022.1|AV928022 AV928022 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13k11 3', mRNA sequence
Length = 667
Score = 105 bits (223), Expect(2) = 2e-032
Identities = 40/86 (46%), Positives = 57/86 (66%)
Frame = +3 / -1
Query: 111 FPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILK 290
FPH++C+VLDLP V+ P+D V YVAGD+F ++ A + LK ++H W D DC+ IL
Sbjct: 667 FPHIKCNVLDLPKVIEKVPSDGIVNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILS 488
Query: 291 NCKKAIPAQGGKVIILDIVVGAGSSS 368
CKKAIP++ ++ I + GSSS
Sbjct: 487 QCKKAIPSREMGGKVIVIDIVVGSSS 410
Score = 53.8 bits (111), Expect(2) = 2e-032
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3 / -1
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L ++ G +RDE +W I +AGF+ YKI+ LG R IIEV P*
Sbjct: 373 LMLVCTKGRQRDENDWSTIFTKAGFSDYKIVKKLGARGIIEVYP* 239
>gb|AV921748.1|AV921748 AV921748 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12j23 3', mRNA sequence
Length = 659
Score = 104 bits (222), Expect(2) = 2e-032
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = +3 / -1
Query: 111 FPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILK 290
+PH++C+VLDLP VV APAD + YVAGD+F +V + V LK ++H W D DCVKIL
Sbjct: 659 YPHIKCTVLDLPKVVEKAPADGVINYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILA 480
Query: 291 NCKKAIPAQGGKVIILDIVVGAGSS 365
C+KAIP + ++ I + G S
Sbjct: 479 QCRKAIPPREEGGKVIIIEIVVGPS 405
Score = 54.2 bits (112), Expect(2) = 2e-032
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +3 / -1
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L ++ G +RDE W ++ +AGFT YKI+ LG RS+IEV P*
Sbjct: 362 LMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP* 228
>gb|BJ468231.1|BJ468231 BJ468231 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37m03 3', mRNA sequence
Length = 626
Score = 104 bits (222), Expect(2) = 2e-032
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = +3 / -3
Query: 111 FPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILK 290
+PH++C+VLDLP VV APAD + YVAGD+F +V + V LK ++H W D DCVKIL
Sbjct: 624 YPHIKCTVLDLPKVVEKAPADGVINYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILA 445
Query: 291 NCKKAIPAQGGKVIILDIVVGAGSS 365
C+KAIP + ++ I + G S
Sbjct: 444 QCRKAIPPREEGGKVIIIEIVVGPS 370
Score = 54.2 bits (112), Expect(2) = 2e-032
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +3 / -3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L ++ G +RDE W ++ +AGFT YKI+ LG RS+IEV P*
Sbjct: 327 LMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP* 193
>gb|BJ468058.1|BJ468058 BJ468058 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30o16 3', mRNA sequence
Length = 674
Score = 105 bits (225), Expect(3) = 3e-032
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = +3 / -2
Query: 96 AIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADC 275
AI KA PH++C+VLDLP V+ AD V YV GD+F +V A AV LK ++H W D DC
Sbjct: 673 AITKAHPHIKCTVLDLPKVIDKTSADGIVNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDC 494
Query: 276 VKILKNCKKAIPAQ 317
VKIL CK AIP++
Sbjct: 493 VKILTQCKNAIPSR 452
Score = 44.6 bits (91), Expect(3) = 3e-032
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3 / -2
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEV 533
L ++ G +R E +W + +AGF+ YKI+ LG R +IEV
Sbjct: 361 LMLVFTRGRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEV 236
Score = 25.8 bits (50), Expect(3) = 3e-032
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +3 / -2
Query: 315 QGGKVIILDIVV 350
+GGKVI++DIVV
Sbjct: 448 EGGKVIVIDIVV 413
>gb|AV930527.1|AV930527 AV930527 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22o21 3', mRNA sequence
Length = 665
Score = 102 bits (217), Expect(2) = 2e-031
Identities = 39/85 (45%), Positives = 56/85 (65%)
Frame = +3 / -3
Query: 114 PHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKN 293
PH++C+VLDLP V+ P+D V YVAGD+F ++ A + LK ++H W D DC+ IL
Sbjct: 663 PHIKCNVLDLPKVIEKVPSDGIVNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILSQ 484
Query: 294 CKKAIPAQGGKVIILDIVVGAGSSS 368
CKKAIP++ ++ I + GSSS
Sbjct: 483 CKKAIPSREMGGKVIVIDIVVGSSS 409
Score = 53.8 bits (111), Expect(2) = 2e-031
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3 / -3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L ++ G +RDE +W I +AGF+ YKI+ LG R IIEV P*
Sbjct: 372 LMLVCTKGRQRDENDWSTIFTKAGFSDYKIVKKLGARGIIEVYP* 238
>gb|BJ468335.1|BJ468335 BJ468335 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38e18 3', mRNA sequence
Length = 744
Score = 100 bits (214), Expect(3) = 9e-031
Identities = 38/71 (53%), Positives = 49/71 (69%)
Frame = +3 / -3
Query: 105 KAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKI 284
+A PH++C+VLDLP V+ AD V YV GD+F +V A AV LK ++H W D DCVKI
Sbjct: 643 RAHPHIKCTVLDLPKVIDKTSADGIVNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDCVKI 464
Query: 285 LKNCKKAIPAQ 317
L CK AIP++
Sbjct: 463 LTQCKNAIPSR 431
Score = 44.6 bits (91), Expect(3) = 9e-031
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3 / -3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEV 533
L ++ G +R E +W + +AGF+ YKI+ LG R +IEV
Sbjct: 340 LMLVFTRGRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEV 215
Score = 25.8 bits (50), Expect(3) = 9e-031
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +3 / -3
Query: 315 QGGKVIILDIVV 350
+GGKVI++DIVV
Sbjct: 427 EGGKVIVIDIVV 392
>gb|AV921351.1|AV921351 AV921351 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23c06 3', mRNA sequence
Length = 657
Score = 100 bits (214), Expect(3) = 9e-031
Identities = 38/71 (53%), Positives = 49/71 (69%)
Frame = +3 / -2
Query: 105 KAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKI 284
+A PH++C+VLDLP V+ AD V YV GD+F +V A AV LK ++H W D DCVKI
Sbjct: 644 RAHPHIKCTVLDLPKVIDKTSADGIVNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDCVKI 465
Query: 285 LKNCKKAIPAQ 317
L CK AIP++
Sbjct: 464 LTQCKNAIPSR 432
Score = 44.6 bits (91), Expect(3) = 9e-031
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3 / -2
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEV 533
L ++ G +R E +W + +AGF+ YKI+ LG R +IEV
Sbjct: 341 LMLVFTRGRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEV 216
Score = 25.8 bits (50), Expect(3) = 9e-031
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +3 / -2
Query: 315 QGGKVIILDIVV 350
+GGKVI++DIVV
Sbjct: 428 EGGKVIVIDIVV 393
>gb|AV929534.1|AV929534 AV929534 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14j15 3', mRNA sequence
Length = 625
Score = 95.9 bits (203), Expect(3) = 9e-031
Identities = 36/64 (56%), Positives = 45/64 (70%)
Frame = +3 / -1
Query: 126 CSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNCKKA 305
C+VLDLP V+ P+D V YVAGD+F +V A AV LK ++H W D DCVKIL CK A
Sbjct: 625 CTVLDLPKVIEKTPSDCVVNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNA 446
Query: 306 IPAQ 317
IP++
Sbjct: 445 IPSR 434
Score = 49.6 bits (102), Expect(3) = 9e-031
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3 / -1
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEV 533
L ++ G +R E +W+ + +AGFT YKII +G R +IEV
Sbjct: 343 LMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEV 218
Score = 25.8 bits (50), Expect(3) = 9e-031
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +3 / -1
Query: 315 QGGKVIILDIVV 350
+GGKVI++DIVV
Sbjct: 430 EGGKVIVIDIVV 395
>gb|BF256054.2|BF256054 HVSMEf0008J16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0008J16f, mRNA sequence
Length = 447
Score = 133 bits (285), Expect = 1e-030
Identities = 54/110 (49%), Positives = 72/110 (65%)
Frame = +3 / +3
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F G+ SL D GG G +AI KAFPH++C+VLDLP V+ P+D V YVAGD+F +
Sbjct: 24 LFDGLQSLTDCCGGDGTTARAIVKAFPHIKCNVLDLPKVIDKVPSDGVVNYVAGDLFHTF 203
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSS 365
A AV LK ++H W D DC+ IL CKKAIP++ ++ I +G GSS
Sbjct: 204 PPAQAVMLKLVLHFWSDEDCINILAQCKKAIPSREMGGKVIIINIGLGSS 353
>gb|AV931697.1|AV931697 AV931697 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23n09 3', mRNA sequence
Length = 672
Score = 99.1 bits (210), Expect(2) = 1e-030
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +3 / -2
Query: 117 HLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNC 296
H++C+VLDLP V+ P+D V YVAGD+F ++ A + LK ++H W D DC+ IL C
Sbjct: 671 HIKCNVLDLPKVIEKVPSDGIVNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILSQC 492
Query: 297 KKAIPAQGGKVIILDIVVGAGSSS 368
KKAIP++ ++ I + GSSS
Sbjct: 491 KKAIPSREMGGKVIVIDIVVGSSS 420
Score = 53.8 bits (111), Expect(2) = 1e-030
Identities = 22/45 (48%), Positives = 29/45 (64%)
Frame = +3 / -2
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L ++ G +RDE +W I +AGF+ YKI+ LG R IIEV P*
Sbjct: 383 LMLVCTKGRQRDENDWSTIFTKAGFSDYKIVKKLGARGIIEVYP* 249
>gb|AV916317.1|AV916317 AV916317 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12j23 5', mRNA sequence
Length = 585
Score = 133 bits (284), Expect = 2e-030
Identities = 53/112 (47%), Positives = 73/112 (65%)
Frame = +3 / +2
Query: 30 GTVFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFE 209
G +F+G+ SL D GG G +A+ KA+PH++C+VLDLP VV APAD + YVAGD+F
Sbjct: 146 GDIFKGLDSLTDCCGGDGTTARALVKAYPHIKCTVLDLPKVVEKAPADGVINYVAGDLFH 325
Query: 210 SVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSS 365
+V + V LK ++H W D DCVKIL C+KAIP + ++ I + G S
Sbjct: 326 TVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVGPS 481
>gb|BI778623.2|BI778623 EBro07_SQ003_N10_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ003_N10 5', mRNA sequence
Length = 604
Score = 133 bits (284), Expect = 2e-030
Identities = 53/112 (47%), Positives = 73/112 (65%)
Frame = +3 / +2
Query: 30 GTVFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFE 209
G +F+G+ SL D GG G +A+ KA+PH++C+VLDLP VV APAD + YVAGD+F
Sbjct: 170 GDIFKGLDSLTDCCGGDGTTARALVKAYPHIKCTVLDLPKVVEKAPADGVINYVAGDLFH 349
Query: 210 SVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSS 365
+V + V LK ++H W D DCVKIL C+KAIP + ++ I + G S
Sbjct: 350 TVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVGPS 505
>gb|AV920383.1|AV920383 AV920383 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13l15 3', mRNA sequence
Length = 682
Score = 100 bits (212), Expect(2) = 3e-030
Identities = 40/83 (48%), Positives = 55/83 (66%)
Frame = +3 / -3
Query: 117 HLECSVLDLPNVVAGAPADTAVKYVAGDMFESVSSADAVFLKSIIHDWGDADCVKILKNC 296
H++C+VLDLP V+ P+D V YVAGD+F +V A AV LK ++H W D DC+ IL C
Sbjct: 677 HIKCNVLDLPKVIDKVPSDGVVNYVAGDLFHTVPPAQAVMLKLVLHFWSDEDCINILAQC 498
Query: 297 KKAIPAQGGKVIILDIVVGAGSS 365
KKAIP++ ++ I + GSS
Sbjct: 497 KKAIPSREMGGKVIIIDIVLGSS 429
Score = 51.9 bits (107), Expect(2) = 3e-030
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3 / -3
Query: 408 LYIMTINGVERDEREWKKIIFEAGFTSYKIIPVLGTRSIIEVCP* 542
L + G +R+E+EW + +AGF+ YKII LG R +IEV P*
Sbjct: 389 LMFICTRGRQRNEKEWSMLFMKAGFSDYKIIKKLGHRGVIEVYP* 255
>gb|BQ659524.1|BQ659524 HE01L03u HE Hordeum vulgare subsp. vulgare cDNA clone HE01L03
3-PRIME, mRNA sequence
Length = 533
Score = 121 bits (258), Expect(2) = 4e-030
Identities = 49/95 (51%), Positives = 66/95 (69%)
Frame = +3 / -3
Query: 198 DMFESVSSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSSCDR 377
DMFES+ ADAV LK+++HDWG DCVKIL+ CK+AIPA+ ++ I + GS D+
Sbjct: 531 DMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAIPARSAGGKVIIIDMVRGSLLGDK 352
Query: 378 KNVETQCLFDLYIMTINGVERDEREWKKIIFEAGF 482
K E + + D++ M NGVERDE EWK+I +AGF
Sbjct: 351 KIAEMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 247
Score = 30.4 bits (60), Expect(2) = 4e-030
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3 / -3
Query: 489 YKIIPVLGTRSIIEVCP* 542
YKI+PVLG S+IE+ P*
Sbjct: 237 YKIMPVLGPLSVIEIYP* 184
>gb|BF260928.2|BF260928 HVSMEf0023E24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023E24f, mRNA sequence
Length = 729
Score = 131 bits (281), Expect = 4e-030
Identities = 54/110 (49%), Positives = 72/110 (65%)
Frame = +3 / +1
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F G+ SL D GG G +AI KAFPH++C+VLDLP V+ P+D V YVAGD+F +V
Sbjct: 373 LFDGLQSLTDCCGGDGTTARAIVKAFPHIKCNVLDLPKVIDKVPSDGVVNYVAGDLFHTV 552
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSS 365
A AV LK ++H W D DC+ IL CKKAIP++ ++ I + GSS
Sbjct: 553 PPAQAVMLKLVLHFWSDEDCINILAQCKKAIPSREMGGKVIIIDIVLGSS 702
>gb|CB879142.1|CB879142 HP11B09T HP Hordeum vulgare subsp. vulgare cDNA clone HP11B09
5-PRIME, mRNA sequence
Length = 562
Score = 131 bits (280), Expect = 6e-030
Identities = 52/111 (46%), Positives = 73/111 (65%)
Frame = +3 / +2
Query: 36 VFQGISSLVDVGGGFGGATQAIAKAFPHLECSVLDLPNVVAGAPADTAVKYVAGDMFESV 215
+F+G+ SL D GG G +AI KAFPH++C+VLDLP V+ P+D V YVAGD+F ++
Sbjct: 188 LFKGVQSLTDCCGGDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDGIVNYVAGDLFHAI 367
Query: 216 SSADAVFLKSIIHDWGDADCVKILKNCKKAIPAQGGKVIILDIVVGAGSSS 368
A + LK ++H W D DC+ IL CKKAIP++ ++ I + GSSS
Sbjct: 368 PPAQVLMLKLVLHFWSDEDCINILAQCKKAIPSREMGGKVIVIDIVVGSSS 520
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 343,217,283
Number of Sequences: 312970
Number of extensions: 5122031
Number of successful extensions: 62591
Number of sequences better than 1.0e-020: 144
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 8883888929
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)