TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437842.2.1
(1093 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE454671.3|BE454671 HVSMEh0094P16f Hordeum vulgare 5-45 ... 499 e-140
gb|BF623201.2|BF623201 HVSMEa0015K22f Hordeum vulgare seedl... 293 e-128
gb|BQ763608.1|BQ763608 EBro02_SQ008_M23_R root, 3 week, hyd... 426 e-119
gb|BI956935.1|BI956935 HVSMEn0006D04f Hordeum vulgare rachi... 412 e-114
gb|BQ766207.1|BQ766207 EBro08_SQ005_H07_R root, 3 week, dro... 402 e-111
gb|BG344702.1|BG344702 HVSMEg0015E07f Hordeum vulgare pre-a... 346 e-104
gb|BQ465081.1|BQ465081 HU02J12r HU Hordeum vulgare subsp. v... 358 4e-098
gb|BE213865.1|BE213865 HV_CEb0001H21f Hordeum vulgare seedl... 336 1e-091
gb|CK124865.1|CK124865 BES1824110k15 BES1824 Hordeum vulgar... 333 1e-090
gb|AL510457.1|AL510457 AL510457 Hordeum vulgare Barke devel... 318 3e-086
gb|BE193837.3|BE193837 HVSMEh0082K14f Hordeum vulgare 5-45 ... 299 1e-080
gb|CB882386.1|CB882386 HL01L15w HL Hordeum vulgare subsp. v... 287 8e-077
gb|BF253382.2|BF253382 HVSMEf0001A07f Hordeum vulgare seedl... 263 4e-072
gb|CK123691.1|CK123691 BES1824105b17 BES1824 Hordeum vulgar... 161 2e-069
gb|BG414540.1|BG414540 HVSMEk0002N03f Hordeum vulgare testa... 193 4e-066
gb|BF064865.2|BF064865 HV_CEb0021D12f Hordeum vulgare seedl... 248 6e-065
gb|BI959839.1|BI959839 HVSMEn0021P10f Hordeum vulgare rachi... 175 1e-058
gb|BI959998.1|BI959998 HVSMEn0022N01f Hordeum vulgare rachi... 221 8e-057
gb|AV916926.1|AV916926 AV916926 K. Sato unpublished cDNA li... 165 3e-056
gb|AL507037.1|AL507037 AL507037 Hordeum vulgare Barke devel... 180 2e-052
gb|CA007491.1|CA007491 HU08C03r HU Hordeum vulgare subsp. v... 176 2e-051
gb|AV833853.1|AV833853 AV833853 K. Sato unpublished cDNA li... 164 6e-051
gb|AV918175.1|AV918175 AV918175 K. Sato unpublished cDNA li... 133 2e-050
gb|BU986484.1|BU986484 HF12A02r HF Hordeum vulgare subsp. v... 197 8e-050
gb|BF260187.2|BF260187 HVSMEf0021F10f Hordeum vulgare seedl... 184 1e-048
gb|BG418054.1|BG418054 HVSMEk0021B11f Hordeum vulgare testa... 174 7e-043
gb|BE411374.1|BE411374 ISC004.H10F990609 ITEC ISC Barley Le... 143 3e-039
gb|BE215262.2|BE215262 HV_CEb0006F04f Hordeum vulgare seedl... 158 6e-038
gb|BE411643.1|BE411643 ISC007.G04F990714 ITEC ISC Barley Le... 133 5e-033
gb|CA012845.1|CA012845 HT06J23r HT Hordeum vulgare subsp. v... 130 2e-029
gb|AL502418.1|AL502418 AL502418 Hordeum vulgare Barke roots... 102 2e-028
gb|BM816676.1|BM816676 HB01C09_T3.ab1 HB Hordeum vulgare su... 60 4e-028
gb|BI958356.1|BI958356 HVSMEn0014I24f Hordeum vulgare rachi... 121 9e-027
gb|AW983524.1|AW983524 HVSMEg0010P03f Hordeum vulgare pre-a... 61 1e-025
gb|BQ757736.1|BQ757736 EBem10_SQ005_B05_R embryo, 2 Day ger... 107 1e-022
gb|CV059902.1|CV059902 BNEL52b8 Barley EST endosperm librar... 106 2e-022
gb|CV061694.1|CV061694 BNEL70h10 Barley EST endosperm libra... 106 2e-022
>gb|BE454671.3|BE454671 HVSMEh0094P16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094P16f, mRNA sequence
Length = 685
Score = 499 bits (1084), Expect = e-140
Identities = 207/227 (91%), Positives = 222/227 (97%)
Frame = +1 / +1
Query: 37 ASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFEVKSGS 216
ASIRMVMSGAAPMGK+LQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPF+VKSGS
Sbjct: 1 ASIRMVMSGAAPMGKELQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFKVKSGS 180
Query: 217 CGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTG 396
CGTVVRNA LKIVDPDT ASLGRNQPGEICIRGEQIMKGYLNDPE+TKNTIDKDGWLHTG
Sbjct: 181 CGTVVRNAGLKIVDPDTGASLGRNQPGEICIRGEQIMKGYLNDPESTKNTIDKDGWLHTG 360
Query: 397 DIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGEVP 576
DIG VDDDDEIFIVDRLKEIIKYKGFQV PAELEALLITHPEIKDAAVVS+KD++AGEVP
Sbjct: 361 DIGIVDDDDEIFIVDRLKEIIKYKGFQVAPAELEALLITHPEIKDAAVVSLKDDLAGEVP 540
Query: 577 VAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGK 717
+AF++R EGSEI+E++IK+FVAKEVVFYKRI++VFFTDSIPKNPSGK
Sbjct: 541 IAFVMRIEGSEITEDDIKKFVAKEVVFYKRIHKVFFTDSIPKNPSGK 681
Score = 349 bits (757), Expect = 1e-095
Identities = 160/226 (70%), Positives = 168/226 (74%)
Frame = -3 / -3
Query: 716 LPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNATGTSPATSSFIETT 537
LPEGF GIESVKK TSFATN L+S S+ISEPS+RI A GTSPA SSF +TT
Sbjct: 680 LPEGFLGIESVKKTLWILL*KTTSFATNFLMSSSVISEPSIRITKAIGTSPARSSFSDTT 501
Query: 536 AASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXXXXXPVCSHPSLSMVFF 357
AASLISG VMRRASSSAG TWKPLYL+ PVCS PSLSMVF
Sbjct: 500 AASLISGWVMRRASSSAGATWKPLYLMISLSLSTMKISSSSSTMPMSPVCSQPSLSMVFL 321
Query: 356 VASGSFR*PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKA 177
V SGS R*PFMICSPRM ISPGWFRP +A VSGSTI S A TTVP +PDLT NGSLA A
Sbjct: 320 VDSGSLR*PFMICSPRMQISPGWFRPREAPVSGSTILSPALRTTVPHDPDLTLNGSLANA 141
Query: 176 RHMASTGPASVIPYPWPSTALGILAMNASWRSFPMGAAPDMTMRME 39
RHMASTGPASVIPYP PSTALGILAM AS S PMGAAPDMTMRM+
Sbjct: 140 RHMASTGPASVIPYPCPSTALGILAMKASCSSLPMGAAPDMTMRMD 3
Score = 240 bits (518), Expect = 1e-062
Identities = 109/209 (52%), Positives = 137/209 (65%)
Frame = -2 / -2
Query: 705 ILRDRIREENSVDPLVEHXXXXXXXXXXXXXXLRAFTAYNECHRDFAGDFIFHRDNSGIL 526
+L D + E++ VDPLVE+ RAF +NE RDFA + R + G+L
Sbjct: 669 VLGD*VGEKDLVDPLVENNLFRDEFFDVILGDFRAFDPHNEGDRDFASKIVLQRYDGGVL 490
Query: 525 DFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLINGVLCRLW 346
D R+ DE+G +L RR+LEALV D LL+PVN+EDL VQP++L++GVL W
Sbjct: 489 DLRVGDEEGLELCRRHLEALVLDDLLEPVNNEDLVVVVDDADVSGVQPAILVDGVLGGFW 310
Query: 345 IIQITFHDLFAADAYLAWLVPSQRRAGVWVDDLQLRVPDDGATGAGLDLERLLGEGQAHG 166
++++TFHDL ADA LA LVP++ AGV VDDL+ V A GLDLERLLGE QAHG
Sbjct: 309 VVKVTFHDLLPADADLAGLVPAEGGAGVGVDDLEPGVAHHRAARPGLDLERLLGERQAHG 130
Query: 165 QHGPRLGHPVPLAEHGVGDLGHERVLEVL 79
QH P L HPVPL EHGVGDLGHE VL++L
Sbjct: 129 QHRPGLRHPVPLPEHGVGDLGHEGVLQLL 43
Score = 132 bits (283), Expect(2) = 2e-044
Identities = 56/108 (51%), Positives = 70/108 (64%)
Frame = +3 / +3
Query: 69 AHGEGPPGRVHGQDPQXXXXXXXXXXXXXXXXXHVPGLRQGAVRGQVRLLWHRRQERGAE 248
AHG+G GR+HGQDPQ HVPG+RQGAV+GQVR++ H +R A+
Sbjct: 33 AHGQGAAGRLHGQDPQRRARAGVRDDGGRAGAGHVPGVRQGAVQGQVRVVRHGGAQRRAQ 212
Query: 249 DRRPRHQRVAGTEPARRDMHPRRTNHERLSE*SRGDKEHH**GRMAAH 392
DRRPRH+R+ EPARRD+HPR +HERL R +EHH G +AAH
Sbjct: 213 DRRPRHRRLPRPEPARRDLHPRGADHERLP*RPRIHQEHHRQGWLAAH 356
Score = 67.0 bits (140), Expect(2) = 2e-044
Identities = 37/92 (40%), Positives = 48/92 (52%)
Frame = +3 / +3
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRCCLDER*SRRRSPGGIHYTQ*RL*DQ*E 620
QA+GD+Q+QGLP + A P HH +QG R + E S RSP + Y RL*+
Sbjct: 405 QAQGDHQVQGLPGGAGRARGPPHHPPGDQGRRRRIAEGRSCWRSPDRLRYADRRL*NHRG 584
Query: 621 RDQAVCCKGGRVLQEDQQSFLHGFYPEESLRQ 716
Q + + G LQED Q H P+E RQ
Sbjct: 585 *HQKIRRERGCFLQEDPQGLFHRLNPQEPFRQ 680
>gb|BF623201.2|BF623201 HVSMEa0015K22f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015K22f, mRNA sequence
Length = 817
Score = 293 bits (634), Expect(3) = e-128
Identities = 124/141 (87%), Positives = 130/141 (92%)
Frame = +1 / +3
Query: 241 ELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDD 420
+LKIVDPDT ASL RN PGEICIRG+QIMKGYLNDPEATKNT DKDGWLHTGDIGYVDDD
Sbjct: 336 KLKIVDPDTGASLARNLPGEICIRGKQIMKGYLNDPEATKNTTDKDGWLHTGDIGYVDDD 515
Query: 421 DEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSE 600
DEIFIVDRLKEIIKYKGFQVPPAELE LLITH EIKDAAVVSM+DE+ GEVPVAFI+R E
Sbjct: 516 DEIFIVDRLKEIIKYKGFQVPPAELEPLLITHAEIKDAAVVSMQDELTGEVPVAFIVRIE 695
Query: 601 GSEISENEIKQFVAKEVVFYK 663
GSEISE+EIKQF AKEVV K
Sbjct: 696 GSEISESEIKQFGAKEVVSTK 758
Score = 202 bits (435), Expect(2) = 2e-093
Identities = 92/135 (68%), Positives = 98/135 (72%)
Frame = -3 / -1
Query: 647 SFATNCLISFSLISEPSLRIMNATGTSPATSSFIETTAASLISGCVMRRASSSAGGTWKP 468
SFA NCLIS SLISEPS+R MNATGTSP +SS I+TTAASLIS CVMRR SSSAGGTW P
Sbjct: 742 SFAPNCLISLSLISEPSIRTMNATGTSPVSSSCIDTTAASLISACVMRRGSSSAGGTWNP 563
Query: 467 LYLIXXXXXXXXXXXXXXXXXXXXPVCSHPSLSMVFFVASGSFR*PFMICSPRMHISPGW 288
LYLI PVC+ PSLS+VFFVASGSFR*PFMIC PRM ISPG
Sbjct: 562 LYLIISLSLSTMKISSSSST*PMSPVCNQPSLSVVFFVASGSFR*PFMICLPRMQISPGR 383
Query: 287 FRPSDALVSGSTIFS 243
R +A VSGSTI S
Sbjct: 382 LRAREAPVSGSTILS 338
Score = 174 bits (375), Expect(3) = e-128
Identities = 75/79 (94%), Positives = 76/79 (96%)
Frame = +1 / +2
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 186
KS RV AADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVL+MCLAFA
Sbjct: 101 KSDRVTAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLSMCLAFA 280
Query: 187 KEPFEVKSGSCGTVVRNAE 243
KEPF VKSGSCGTVVRNAE
Sbjct: 281 KEPFAVKSGSCGTVVRNAE 337
Score = 161 bits (346), Expect(2) = 2e-093
Identities = 69/80 (86%), Positives = 72/80 (90%)
Frame = -3 / -2
Query: 245 SSAFLTTVPQEPDLTSNGSLAKARHMASTGPASVIPYPWPSTALGILAMNASWRSFPMGA 66
+SAF TTVPQ+PDLT+NGSLA ARHM STGPASVIPYP PSTALGILAM ASWRS PMGA
Sbjct: 339 ASAFRTTVPQDPDLTANGSLANARHMDSTGPASVIPYPCPSTALGILAMKASWRSLPMGA 160
Query: 65 APDMTMRMEARSAAPTRGLL 6
APDMTMRMEARSAA TR LL
Sbjct: 159 APDMTMRMEARSAAVTRSLL 100
Score = 158 bits (339), Expect(3) = 8e-064
Identities = 69/122 (56%), Positives = 84/122 (68%)
Frame = -2 / -3
Query: 606 RAFTAYNECHRDFAGDFIFHRDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDED 427
RAF +NEC+ F FI HR NS I DF +C+EKGF+ RRRYLE+LVFDYL +PV+DED
Sbjct: 701 RAFNPHNECNWYFTSKFILHRYNSSIFDFSVCNEKGFEFRRRYLESLVFDYLFEPVDDED 522
Query: 426 LXXXXXXXXXXXVQPSVLINGVLCRLWIIQITFHDLFAADAYLAWLVPSQRRAGVWVDDL 247
L VQP++L++GVLC L II +TFHDL AADA L V + AGV VDDL
Sbjct: 521 LVIIIDITDVSSVQPTILVSGVLCGLRII*VTFHDLLAADADLPGQVAGEGGAGVGVDDL 342
Query: 246 QL 241
+L
Sbjct: 341 EL 336
Score = 100 bits (212), Expect(3) = 2e-054
Identities = 45/70 (64%), Positives = 51/70 (72%)
Frame = +3 / +2
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRCCLDER*SRRRSPGGIHYTQ*RL*DQ*E 620
QA+ DNQIQG+PSTSCG +PSH+T *NQ C CC+D R*+ S IH *RL*DQ E
Sbjct: 536 QAQRDNQIQGIPSTSCGTRTPSHYTR*NQRCCCCIDAR*TYW*STSCIHCAD*RL*DQRE 715
Query: 621 RDQAVCCKGG 650
RDQAV CK G
Sbjct: 716 RDQAVWCKRG 745
Score = 96.8 bits (205), Expect(3) = 8e-064
Identities = 42/57 (73%), Positives = 43/57 (75%)
Frame = -2 / -1
Query: 249 LQLRVPDDGATGAGLDLERLLGEGQAHGQHGPRLGHPVPLAEHGVGDLGHERVLEVL 79
L RVP A G LD ERLLGE QAHGQH P L HPVPL+EHGVGDLGHE VLEVL
Sbjct: 343 LSFRVPHHRAAGPRLDGERLLGERQAHGQHRPGLRHPVPLSEHGVGDLGHEGVLEVL 173
Score = 76.7 bits (161), Expect(3) = 2e-054
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = +3 / +2
Query: 243 AEDRRPRHQRVAGTEPARRDMHPRRTNHERLSE*SRGDKEHH**GRMAAH 392
A+DRRPRH+R+ +PAR D+HPR+ +HERL +*S G KEHH* G + AH
Sbjct: 338 AQDRRPRHRRLPRPQPARGDLHPRQADHERLPK*SGGHKEHH*QGWLVAH 487
Score = 75.3 bits (158), Expect(3) = 2e-054
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = +3 / +1
Query: 69 AHGEGPPGRVHGQDPQXXXXXXXXXXXXXXXXXHVPGLRQGAVRGQVRLLWHRRQERGA 245
AHG+GPPGR+HGQDPQ HVPG+RQGAVR QV +L H ERG+
Sbjct: 163 AHGQGPPGRLHGQDPQRRARTGVRDDGGRAGAVHVPGVRQGAVRRQVGVLRHGGAERGS 339
Score = 51.0 bits (105), Expect(3) = 6e-021
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +2 / +1
Query: 473 SKYLLRSLKPFSSHILKSRMPLLSR*KMKSPAKSRWHSLYAVKA 604
SKYLLR+ PFS H LKS+M LL R KM K + HSL +KA
Sbjct: 568 SKYLLRNSNPFSLHTLKSKMLLLYRCKMNLLVKYQLHSLCGLKA 699
Score = 49.2 bits (101), Expect(3) = 6e-021
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +2 / +1
Query: 263 TPARRWDGTSQARYASAANKS*KVI*MIQRRQRTPLIRTDGC 388
TPA T R ASAA++S*KV *MI+R QRTPL R GC
Sbjct: 358 TPAPPSPATCPGRSASAASRS*KVT*MIRRPQRTPLTRMVGC 483
Score = 38.2 bits (77), Expect(3) = 6e-021
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / +3
Query: 122 CSARGTG*PRRGPCWPCAW 178
CS RGTG* R G C PCAW
Sbjct: 216 CSDRGTG*RRPGRCCPCAW 272
Score = 29.9 bits (59), Expect(3) = e-128
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +1 / +3
Query: 673 RVFFTDSIPKNPSGK 717
+VFF DS+PK+P+G+
Sbjct: 765 QVFFADSVPKSPAGR 809
Score = 28.6 bits (56), Expect(3) = 8e-064
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1 / -2
Query: 652 RPPLQQTA*SRSH*SQSLHCV**M 581
+P L QTA*SRS *SQSL *M
Sbjct: 747 QPLLHQTA*SRSR*SQSLQSAQ*M 676
>gb|BQ763608.1|BQ763608 EBro02_SQ008_M23_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_M23 5', mRNA sequence
Length = 590
Score = 426 bits (925), Expect = e-119
Identities = 176/196 (89%), Positives = 190/196 (96%)
Frame = +1 / +3
Query: 115 NAVLGQGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQP 294
NAVLGQGYGMTEAGPVLAMCLAFAKEPF+VKSGSCGTVVRNA LKIVDPDT ASLGRNQP
Sbjct: 3 NAVLGQGYGMTEAGPVLAMCLAFAKEPFKVKSGSCGTVVRNAGLKIVDPDTGASLGRNQP 182
Query: 295 GEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGF 474
GEICIRGEQIMKGYLNDPE+TKNTIDKDGWLHTGDIG VDDDDEIFIVDRLKEIIKYKGF
Sbjct: 183 GEICIRGEQIMKGYLNDPESTKNTIDKDGWLHTGDIGIVDDDDEIFIVDRLKEIIKYKGF 362
Query: 475 QVPPAELEALLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVV 654
QV PAELEALLITHPEIKDAAVVS+KD++AGEVP+AF++R EGSEI+E++IK+FVAKE V
Sbjct: 363 QVAPAELEALLITHPEIKDAAVVSLKDDLAGEVPIAFVMRIEGSEITEDDIKKFVAKEGV 542
Query: 655 FYKRINRVFFTDSIPK 702
FYKRI++VFFTDSIPK
Sbjct: 543 FYKRIHKVFFTDSIPK 590
Score = 291 bits (629), Expect = 6e-078
Identities = 134/195 (68%), Positives = 141/195 (72%)
Frame = -3 / -2
Query: 698 GIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNATGTSPATSSFIETTAASLIS 519
GIESVKK SFATN L+S S+ISEPS+RI A GTSPA SSF +TTAASLIS
Sbjct: 586 GIESVKKTLWILL*KTPSFATNFLMSSSVISEPSIRITKAIGTSPARSSFSDTTAASLIS 407
Query: 518 GCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXXXXXPVCSHPSLSMVFFVASGSF 339
G VMRRASSSAG TWKPLYL+ PVCS PSLSMVF V SGS
Sbjct: 406 GWVMRRASSSAGATWKPLYLMISLSLSTMKISSSSSTMPMSPVCSQPSLSMVFLVDSGSL 227
Query: 338 R*PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMAST 159
R*PFMICSPRM ISPGWFRP +A VSGSTI S A TTVP +PDLT NGSLA ARHMAST
Sbjct: 226 R*PFMICSPRMQISPGWFRPREAPVSGSTILSPALRTTVPHDPDLTLNGSLANARHMAST 47
Query: 158 GPASVIPYPWPSTAL 114
GPASVIPYP PSTAL
Sbjct: 46 GPASVIPYPCPSTAL 2
Score = 219 bits (472), Expect = 3e-056
Identities = 101/196 (51%), Positives = 125/196 (63%)
Frame = -2 / -1
Query: 702 LRDRIREENSVDPLVEHXXXXXXXXXXXXXXLRAFTAYNECHRDFAGDFIFHRDNSGILD 523
L D + EE+ VDPLVE+ RAF +NE RDFA + R + G+LD
Sbjct: 590 LGD*VGEEDLVDPLVENTLLRDEFFDVILGDFRAFDPHNEGDRDFASKIVLQRYDGGVLD 411
Query: 522 FRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLINGVLCRLWI 343
R+ DE+G +L RR+LEALV D LL+PVN+EDL VQP++L++GVL W+
Sbjct: 410 LRVGDEEGLELCRRHLEALVLDDLLEPVNNEDLVVVVDDADVSGVQPAILVDGVLGGFWV 231
Query: 342 IQITFHDLFAADAYLAWLVPSQRRAGVWVDDLQLRVPDDGATGAGLDLERLLGEGQAHGQ 163
+++TFHDL ADA LA LVP++ AGV VDDL+ V A GLDLERLLGE QAHGQ
Sbjct: 230 VKVTFHDLLPADADLAGLVPAEGGAGVGVDDLEPGVAHHRAARPGLDLERLLGERQAHGQ 51
Query: 162 HGPRLGHPVPLAEHGV 115
H P L HPVPL EHGV
Sbjct: 50 HRPGLRHPVPLPEHGV 3
Score = 105 bits (223), Expect(3) = 8e-044
Identities = 44/75 (58%), Positives = 56/75 (74%)
Frame = +3 / +2
Query: 168 HVPGLRQGAVRGQVRLLWHRRQERGAEDRRPRHQRVAGTEPARRDMHPRRTNHERLSE*S 347
HVPG+RQGAV+GQVR++ H +R A+DRRPRH+R+ EPARRD+HPR +HERL
Sbjct: 56 HVPGVRQGAVQGQVRVVRHGGAQRRAQDRRPRHRRLPRPEPARRDLHPRGADHERLP*RP 235
Query: 348 RGDKEHH**GRMAAH 392
R +EHH G +AAH
Sbjct: 236 RIHQEHHRQGWLAAH 280
Score = 66.1 bits (138), Expect(3) = 8e-044
Identities = 36/87 (41%), Positives = 47/87 (54%)
Frame = +3 / +2
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRCCLDER*SRRRSPGGIHYTQ*RL*DQ*E 620
QA+GD+Q+QGLP + A P HH +QG R + E S RSP + Y RL*+
Sbjct: 329 QAQGDHQVQGLPGGAGRARGPPHHPPGDQGRRRRIAEGRSCWRSPDRLRYADRRL*NHRG 508
Query: 621 RDQAVCCKGGRVLQEDQQSFLHGFYPE 701
Q + +GG LQED Q LH P+
Sbjct: 509 *HQKIRREGGCFLQEDPQGLLHRLNPQ 589
Score = 45.1 bits (92), Expect(3) = 8e-044
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +2 / +1
Query: 122 CSARGTG*PRRGPCWPCAW 178
CS RGTG* R G CWPCAW
Sbjct: 10 CSGRGTG*RRPGRCWPCAW 66
>gb|BI956935.1|BI956935 HVSMEn0006D04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0006D04f, mRNA sequence
Length = 654
Score = 412 bits (894), Expect = e-114
Identities = 172/197 (87%), Positives = 184/197 (93%)
Frame = +1 / +1
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 186
KSP+V A DLASIRMVMSGAAPMGK+LQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA
Sbjct: 64 KSPQVTAGDLASIRMVMSGAAPMGKELQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 243
Query: 187 KEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNT 366
KEPF+VKSGSCGTVVRNA LKIVDPDT ASLGRNQPGEICIRGEQIMKGYLNDP++TKNT
Sbjct: 244 KEPFKVKSGSCGTVVRNAGLKIVDPDTGASLGRNQPGEICIRGEQIMKGYLNDPKSTKNT 423
Query: 367 IDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 546
IDKDGWLHTGDIG VDDDDEIFIVDRLKEIIKYKGFQV PA+LEALLITHPEI+D VV
Sbjct: 424 IDKDGWLHTGDIGIVDDDDEIFIVDRLKEIIKYKGFQVAPAKLEALLITHPEIQDXGVVF 603
Query: 547 MKDEVAGEVPVAFIIRS 597
+KD++A EVP+ F+ S
Sbjct: 604 LKDDLACEVPIPFVCGS 654
Score = 290 bits (627), Expect = 1e-077
Identities = 133/190 (70%), Positives = 137/190 (72%)
Frame = -3 / -2
Query: 575 GTSPATSSFIETTAASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXXXXX 396
GTS A SSF TT S ISG VMRRASS AG TWKPLYL+
Sbjct: 632 GTSQARSSFRNTTPXSWISGWVMRRASSFAGATWKPLYLMISLSLSTMKISSSSSTMPMS 453
Query: 395 PVCSHPSLSMVFFVASGSFR*PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQ 216
PVCS PSLSMVF V GS R*PFMICSPRM ISPGWFRP +A VSGSTI S A TTVP
Sbjct: 452 PVCSQPSLSMVFLVDFGSLR*PFMICSPRMQISPGWFRPREAPVSGSTILSPALRTTVPH 273
Query: 215 EPDLTSNGSLAKARHMASTGPASVIPYPWPSTALGILAMNASWRSFPMGAAPDMTMRMEA 36
+PDLT NGSLA ARHMASTGPASVIPYP PSTALGILAM AS S PMGAAPDMTMRM+A
Sbjct: 272 DPDLTLNGSLANARHMASTGPASVIPYPCPSTALGILAMKASCSSLPMGAAPDMTMRMDA 93
Query: 35 RSAAPTRGLL 6
RS A T GLL
Sbjct: 92 RSPAVTWGLL 63
Score = 215 bits (464), Expect = 3e-055
Identities = 95/169 (56%), Positives = 118/169 (69%)
Frame = -2 / -1
Query: 585 ECHRDFAGDFIFHRDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXXX 406
E RDFA + ++G+LD R+ DE+G +L RR+LEALV D LL+PVN+EDL
Sbjct: 642 EGDRDFASKIVLQEYDAGVLDLRVGDEEGLELCRRHLEALVLDDLLEPVNNEDLVVVVDD 463
Query: 405 XXXXXVQPSVLINGVLCRLWIIQITFHDLFAADAYLAWLVPSQRRAGVWVDDLQLRVPDD 226
VQP++L++GVL W++++TFHDL ADA LA LVP++ AGV VDDL+ V
Sbjct: 462 ADVSGVQPAILVDGVLGGFWVVKVTFHDLLPADADLAGLVPAEGGAGVGVDDLEPGVAHH 283
Query: 225 GATGAGLDLERLLGEGQAHGQHGPRLGHPVPLAEHGVGDLGHERVLEVL 79
A GLDLERLLGE QAHGQH P L HPVPL EHGVGDLGHE VL++L
Sbjct: 282 RAARPGLDLERLLGERQAHGQHRPGLRHPVPLPEHGVGDLGHEGVLQLL 136
Score = 131 bits (280), Expect(2) = 7e-035
Identities = 55/108 (50%), Positives = 70/108 (64%)
Frame = +3 / +3
Query: 69 AHGEGPPGRVHGQDPQXXXXXXXXXXXXXXXXXHVPGLRQGAVRGQVRLLWHRRQERGAE 248
AHG+G GR+HGQDPQ HVPG+RQGAV+GQVR++ H +R A+
Sbjct: 126 AHGQGAAGRLHGQDPQRRARAGVRDDGGRAGAGHVPGVRQGAVQGQVRVVRHGGAQRRAQ 305
Query: 249 DRRPRHQRVAGTEPARRDMHPRRTNHERLSE*SRGDKEHH**GRMAAH 392
DRRPRH+R+ EPARRD+HPR +HERL + +EHH G +AAH
Sbjct: 306 DRRPRHRRLPRPEPARRDLHPRGADHERLP*RPKIHQEHHRQGWLAAH 449
Score = 36.8 bits (74), Expect(2) = 7e-035
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +3 / +3
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRCCLDER*SRRRSP 575
QA+GD+Q+QGLP + A P HH + R + E S RSP
Sbjct: 498 QAQGDHQVQGLPGGAGKARGPPHHPPGDPRXRRRIPEGRSCLRSP 632
>gb|BQ766207.1|BQ766207 EBro08_SQ005_H07_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ005_H07 5', mRNA sequence
Length = 552
Score = 402 bits (873), Expect = e-111
Identities = 166/183 (90%), Positives = 178/183 (97%)
Frame = +1 / +3
Query: 85 LQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPD 264
LQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPF+VKSGSCGTVVRNA LKIVDPD
Sbjct: 3 LQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFKVKSGSCGTVVRNAGLKIVDPD 182
Query: 265 TSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDR 444
T ASLGRNQPGEICIRGEQIMKGYLNDPE+TKNTIDKDGWLHTGDIG VDDDDEIFIVDR
Sbjct: 183 TGASLGRNQPGEICIRGEQIMKGYLNDPESTKNTIDKDGWLHTGDIGIVDDDDEIFIVDR 362
Query: 445 LKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENE 624
LKEIIKYKGFQV PAELEALLITHPEIKDAAVVS+KD++AGEVP+AF++R EGSEI+E++
Sbjct: 363 LKEIIKYKGFQVAPAELEALLITHPEIKDAAVVSLKDDLAGEVPIAFVMRIEGSEITEDD 542
Query: 625 IKQ 633
IK+
Sbjct: 543 IKK 551
Score = 285 bits (617), Expect = 3e-076
Identities = 129/180 (71%), Positives = 136/180 (75%)
Frame = -3 / -3
Query: 629 LISFSLISEPSLRIMNATGTSPATSSFIETTAASLISGCVMRRASSSAGGTWKPLYLIXX 450
L+S S+ISEPS+RI A GTSPA SSF +TTAASLISG VMRRASSSAG TWKPLYL+
Sbjct: 547 LMSSSVISEPSIRITKAIGTSPARSSFSDTTAASLISGWVMRRASSSAGATWKPLYLMIS 368
Query: 449 XXXXXXXXXXXXXXXXXXPVCSHPSLSMVFFVASGSFR*PFMICSPRMHISPGWFRPSDA 270
PVCS PSLSMVF V SGS R*PFMICSPRM ISPGWFRP +A
Sbjct: 367 LSLSTMKISSSSSTMPMSPVCSQPSLSMVFLVDSGSLR*PFMICSPRMQISPGWFRPREA 188
Query: 269 LVSGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMASTGPASVIPYPWPSTALGILAMNAS 90
VSGSTI S A TTVP +PDLT NGSLA ARHMASTGPASVIPYP PSTALGILAM AS
Sbjct: 187 PVSGSTILSPALRTTVPHDPDLTLNGSLANARHMASTGPASVIPYPCPSTALGILAMKAS 8
Score = 224 bits (484), Expect = 6e-058
Identities = 99/174 (56%), Positives = 121/174 (69%)
Frame = -2 / -2
Query: 606 RAFTAYNECHRDFAGDFIFHRDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDED 427
RAF +NE RDFA + R + G+LD R+ DE+G +L RR+LEALV D LL+PVN+ED
Sbjct: 524 RAFDPHNEGDRDFASKIVLQRYDGGVLDLRVGDEEGLELCRRHLEALVLDDLLEPVNNED 345
Query: 426 LXXXXXXXXXXXVQPSVLINGVLCRLWIIQITFHDLFAADAYLAWLVPSQRRAGVWVDDL 247
L VQP++L++GVL W++++TFHDL ADA LA LVP++ AGV VDDL
Sbjct: 344 LVVVVDDADVSGVQPAILVDGVLGGFWVVKVTFHDLLPADADLAGLVPAEGGAGVGVDDL 165
Query: 246 QLRVPDDGATGAGLDLERLLGEGQAHGQHGPRLGHPVPLAEHGVGDLGHERVLE 85
+ V A GLDLERLLGE QAHGQH P L HPVPL EHGVGDLGHE VL+
Sbjct: 164 EPGVAHHRAARPGLDLERLLGERQAHGQHRPGLRHPVPLPEHGVGDLGHEGVLQ 3
Score = 121 bits (259), Expect(2) = 3e-035
Identities = 52/101 (51%), Positives = 65/101 (64%)
Frame = +3 / +2
Query: 90 GRVHGQDPQXXXXXXXXXXXXXXXXXHVPGLRQGAVRGQVRLLWHRRQERGAEDRRPRHQ 269
GR+HGQDPQ HVPG+RQGAV+GQVR++ H +R A+DRRPRH+
Sbjct: 8 GRLHGQDPQRRARAGVRDDGGRAGAGHVPGVRQGAVQGQVRVVRHGGAQRRAQDRRPRHR 187
Query: 270 RVAGTEPARRDMHPRRTNHERLSE*SRGDKEHH**GRMAAH 392
R+ EPARRD+HPR +HERL R +EHH G +AAH
Sbjct: 188 RLPRPEPARRDLHPRGADHERLP*RPRIHQEHHRQGWLAAH 310
Score = 47.8 bits (98), Expect(2) = 3e-035
Identities = 25/57 (43%), Positives = 33/57 (57%)
Frame = +3 / +2
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRCCLDER*SRRRSPGGIHYTQ*RL*D 611
QA+GD+Q+QGLP + A P HH +QG R + E S RSP + Y RL*+
Sbjct: 359 QAQGDHQVQGLPGGAGRARGPPHHPPGDQGRRRRIAEGRSCWRSPDRLRYADRRL*N 529
>gb|BG344702.1|BG344702 HVSMEg0015E07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0015E07f, mRNA sequence
Length = 875
Score = 346 bits (749), Expect(4) = e-104
Identities = 144/158 (91%), Positives = 148/158 (93%)
Frame = +1 / +1
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 186
KSP+V A DLA IRMVMSGAAPMGK+LQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA
Sbjct: 220 KSPQVTAGDLAXIRMVMSGAAPMGKELQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 399
Query: 187 KEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNT 366
KEPF+VKSGSCGTVVRNA LKIVDPDT LGRNQPGEICIRGEQIMKGYLNDPE+TKNT
Sbjct: 400 KEPFKVKSGSCGTVVRNAGLKIVDPDTGXLLGRNQPGEICIRGEQIMKGYLNDPESTKNT 579
Query: 367 IDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQV 480
IDKDGWLHTGDIG VDDDDEIFIVDRLKEIIKYKG V
Sbjct: 580 IDKDGWLHTGDIGIVDDDDEIFIVDRLKEIIKYKGLXV 693
Score = 238 bits (514), Expect(3) = 1e-065
Identities = 109/158 (68%), Positives = 112/158 (70%)
Frame = -3 / -1
Query: 479 TWKPLYLIXXXXXXXXXXXXXXXXXXXXPVCSHPSLSMVFFVASGSFR*PFMICSPRMHI 300
T +PLYL+ PVCS PSLSMVF V SGS R*PFMICSPRM I
Sbjct: 692 T*RPLYLMISLSLSTMKISSSSSTMPMSPVCSQPSLSMVFLVDSGSLR*PFMICSPRMQI 513
Query: 299 SPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMASTGPASVIPYPWPST 120
SPGWFRP VSGSTI S A TTVP +PDLT NGSLA ARHMASTGPASVIPYP PST
Sbjct: 512 SPGWFRPRRXPVSGSTILSPALRTTVPHDPDLTLNGSLANARHMASTGPASVIPYPCPST 333
Query: 119 ALGILAMNASWRSFPMGAAPDMTMRMEARSAAPTRGLL 6
ALGILAM AS S PMGAAPDMTMRM ARS A T GLL
Sbjct: 332 ALGILAMKASCSSLPMGAAPDMTMRMXARSPAVTWGLL 219
Score = 177 bits (381), Expect = 1e-043
Identities = 78/134 (58%), Positives = 94/134 (70%)
Frame = -2 / -3
Query: 480 YLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLINGVLCRLWIIQITFHDLFAADAY 301
+ +ALV D LL+PVN+EDL VQP++L++GVL W++++TFHDL ADA
Sbjct: 693 HXKALVLDDLLEPVNNEDLVVVVDDADVSGVQPAILVDGVLGGFWVVKVTFHDLLPADAD 514
Query: 300 LAWLVPSQRRAGVWVDDLQLRVPDDGATGAGLDLERLLGEGQAHGQHGPRLGHPVPLAEH 121
LA LVP + AGV VDDL+ V A GLDLERLLGE QAHGQH P L HPVPL EH
Sbjct: 513 LAGLVPPEEAAGVGVDDLEPGVAHHRAARPGLDLERLLGERQAHGQHRPGLRHPVPLPEH 334
Query: 120 GVGDLGHERVLEVL 79
GVGDLGHE VL++L
Sbjct: 333 GVGDLGHEGVLQLL 292
Score = 128 bits (275), Expect(2) = 5e-030
Identities = 55/108 (50%), Positives = 68/108 (62%)
Frame = +3 / +3
Query: 69 AHGEGPPGRVHGQDPQXXXXXXXXXXXXXXXXXHVPGLRQGAVRGQVRLLWHRRQERGAE 248
AHG+G GR+HGQDPQ HVPG+RQGAV+GQVR++ H +R A+
Sbjct: 282 AHGQGAAGRLHGQDPQRRARAGVRDDGGRAGAGHVPGVRQGAVQGQVRVVRHGGAQRRAQ 461
Query: 249 DRRPRHQRVAGTEPARRDMHPRRTNHERLSE*SRGDKEHH**GRMAAH 392
DRRPRH+ EPARRD+HPR +HERL R +EHH G +AAH
Sbjct: 462 DRRPRHRXPPRAEPARRDLHPRGADHERLP*RPRIHQEHHRQGWLAAH 605
Score = 32.2 bits (64), Expect(4) = e-104
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1 / +2
Query: 574 PVAFIIRSEGSEISENEIKQFVAKEVVF 657
P+ F+ SEG EI+ +++F AKEV F
Sbjct: 791 PIGFVCGSEGFEITGGALQKFRAKEVGF 874
Score = 29.9 bits (59), Expect(4) = e-104
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1 / +3
Query: 502 LLITHPEIKDAAVVSMKDE 558
L + PEIKDAAVVS+K++
Sbjct: 717 LSLPTPEIKDAAVVSLKEQ 773
Score = 29.0 bits (57), Expect(4) = e-104
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 466 KGFQVPPAELEALLITHP 519
+ F PAELEA LITHP
Sbjct: 680 RAFXWAPAELEAPLITHP 733
Score = 25.8 bits (50), Expect(3) = 1e-065
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3 / -2
Query: 554 SFIETTAASLISG 516
SF +TTAASLISG
Sbjct: 769 SFSDTTAASLISG 731
Score = 25.4 bits (49), Expect(3) = 1e-065
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -3 / -3
Query: 518 GCVMRRASSSAGGTWKPLYL 459
G VMR ASSSAG K L L
Sbjct: 732 GWVMRGASSSAGAHXKALVL 673
Score = 22.6 bits (43), Expect(2) = 5e-030
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +3 / +3
Query: 441 QAEGDNQIQG 470
QA+GD+Q+QG
Sbjct: 654 QAQGDHQVQG 683
>gb|BQ465081.1|BQ465081 HU02J12r HU Hordeum vulgare subsp. vulgare cDNA clone HU02J12
5-PRIME, mRNA sequence
Length = 633
Score = 358 bits (775), Expect = 4e-098
Identities = 150/158 (94%), Positives = 152/158 (96%)
Frame = +1 / +2
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 186
KS RV AADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVL+MCLAFA
Sbjct: 158 KSDRVTAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLSMCLAFA 337
Query: 187 KEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNT 366
KEPF VKSGSCGTVVRNAELKIVDPDT ASL RN PGEICIRG+QIMKGYLNDPEATKNT
Sbjct: 338 KEPFAVKSGSCGTVVRNAELKIVDPDTGASLARNLPGEICIRGKQIMKGYLNDPEATKNT 517
Query: 367 IDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQV 480
IDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQV
Sbjct: 518 IDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQV 631
Score = 262 bits (567), Expect = 2e-069
Identities = 117/159 (73%), Positives = 121/159 (76%)
Frame = -3 / -1
Query: 482 GTWKPLYLIXXXXXXXXXXXXXXXXXXXXPVCSHPSLSMVFFVASGSFR*PFMICSPRMH 303
GTW PLYLI PVC+ PSLSMVFFVASGSFR*PFMIC PRM
Sbjct: 633 GTWNPLYLIISLSLSTMKISSSSST*PMSPVCNQPSLSMVFFVASGSFR*PFMICLPRMQ 454
Query: 302 ISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMASTGPASVIPYPWPS 123
ISPG R +A VSGSTI SSAF TTVPQ+PDLT+NGSLA ARHM STGPASVIPYP PS
Sbjct: 453 ISPGRLRAREAPVSGSTILSSAFRTTVPQDPDLTANGSLANARHMDSTGPASVIPYPCPS 274
Query: 122 TALGILAMNASWRSFPMGAAPDMTMRMEARSAAPTRGLL 6
TALGILAM ASWRS PMGAAPDMTMRMEARSAA TR LL
Sbjct: 273 TALGILAMKASWRSLPMGAAPDMTMRMEARSAAVTRSLL 157
Score = 192 bits (414), Expect = 3e-048
Identities = 87/134 (64%), Positives = 97/134 (72%)
Frame = -2 / -3
Query: 480 YLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLINGVLCRLWIIQITFHDLFAADAY 301
YLE+LVFDYL +PV+DEDL VQP++L+NGVLC L II +TFHDL AADA
Sbjct: 631 YLESLVFDYLFEPVDDEDLVIIIDITDVSSVQPTILVNGVLCGLRII*VTFHDLLAADAD 452
Query: 300 LAWLVPSQRRAGVWVDDLQLRVPDDGATGAGLDLERLLGEGQAHGQHGPRLGHPVPLAEH 121
L V + AGV VDDL+LRVP A G LD ERLLGE QAHGQH P L HPVPL+EH
Sbjct: 451 LPRQVAGEGGAGVGVDDLELRVPHHRAAGPRLDGERLLGERQAHGQHRPGLRHPVPLSEH 272
Query: 120 GVGDLGHERVLEVL 79
GVGDLGHE VLEVL
Sbjct: 271 GVGDLGHEGVLEVL 230
Score = 144 bits (310), Expect(2) = 6e-037
Identities = 60/108 (55%), Positives = 73/108 (67%)
Frame = +3 / +1
Query: 69 AHGEGPPGRVHGQDPQXXXXXXXXXXXXXXXXXHVPGLRQGAVRGQVRLLWHRRQERGAE 248
AHG+GPPGR+HGQDPQ HVPG+RQGAVR QV +L H ERGA+
Sbjct: 220 AHGQGPPGRLHGQDPQRRARTGVRDDGGRAGAVHVPGVRQGAVRRQVGVLRHGGAERGAQ 399
Query: 249 DRRPRHQRVAGTEPARRDMHPRRTNHERLSE*SRGDKEHH**GRMAAH 392
DRRPRH+R+ +PA D+HPR+ +HERL +*S G KEHH* G + AH
Sbjct: 400 DRRPRHRRLPRPQPAWGDLHPRQADHERLPK*SGGHKEHH*QGWLVAH 543
Score = 29.9 bits (59), Expect(2) = 6e-037
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3 / +1
Query: 441 QAEGDNQIQGLPST 482
QA+ DNQIQG+PST
Sbjct: 592 QAQRDNQIQGIPST 633
>gb|BE213865.1|BE213865 HV_CEb0001H21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001H21f, mRNA sequence
Length = 922
Score = 336 bits (728), Expect = 1e-091
Identities = 138/163 (84%), Positives = 155/163 (95%)
Frame = +1 / +1
Query: 277 LGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEI 456
LGRNQPGE +RGE IMKGYLNDPE+TKNTIDKDGWLHTGDIG VDDDDEIFIVDRLKEI
Sbjct: 1 LGRNQPGERGVRGEHIMKGYLNDPESTKNTIDKDGWLHTGDIGIVDDDDEIFIVDRLKEI 180
Query: 457 IKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQF 636
+KYKGFQV PAELEALLITHPEIKDAAVVS+KD++AGEVP+AF++R EGSEI+E++IK+F
Sbjct: 181 MKYKGFQVAPAELEALLITHPEIKDAAVVSLKDDLAGEVPIAFVMRIEGSEITEDDIKKF 360
Query: 637 VAKEVVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGIPS 765
VAKEV FYKRI++VFFTDS+PKNPSG+ILRKDLRARLA GIPS
Sbjct: 361 VAKEVGFYKRIHKVFFTDSMPKNPSGEILRKDLRARLATGIPS 489
Score = 227 bits (490), Expect = 9e-059
Identities = 106/162 (65%), Positives = 113/162 (69%)
Frame = -3 / -3
Query: 764 LGMPAASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIM 585
LGMP AS AL+SFLRI PEGF GIESVKK TSFATN L+S S+ISEPS+RI
Sbjct: 488 LGMPVASLALKSFLRISPEGFLGIESVKKTLWILL*KPTSFATNFLMSSSVISEPSIRIT 309
Query: 584 NATGTSPATSSFIETTAASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXX 405
A GTSPA SSF +TTAASLISG VMRRASSSAG TWKPLY +
Sbjct: 308 KAIGTSPARSSFSDTTAASLISGWVMRRASSSAGATWKPLYFMISLSLSTMKISSSSSTM 129
Query: 404 XXXPVCSHPSLSMVFFVASGSFR*PFMICSPRMHISPGWFRP 279
PVCS PSLSMVF V SGS R*PFMICSPR +SPGWFRP
Sbjct: 128 PMSPVCSQPSLSMVFLVDSGSLR*PFMICSPRTPLSPGWFRP 3
Score = 119 bits (255), Expect(2) = 7e-033
Identities = 51/110 (46%), Positives = 72/110 (65%)
Frame = -2 / -2
Query: 606 RAFTAYNECHRDFAGDFIFHRDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDED 427
RAF +NE RDFA + R + G+LD R+ DE+G +L RR+LEALV LL+PVN+ED
Sbjct: 330 RAFDPHNEGDRDFASKIVLQRYDGGVLDLRVGDEEGLELCRRHLEALVLHDLLEPVNNED 151
Query: 426 LXXXXXXXXXXXVQPSVLINGVLCRLWIIQITFHDLFAADAYLAWLVPSQ 277
L VQP++L++GVL W++++TFHD+ A A L LVP++
Sbjct: 150 LVVVVDDADVSGVQPAILVDGVLGGFWVVKVTFHDMLPAHAPLPGLVPAE 1
Score = 41.4 bits (84), Expect(2) = 7e-033
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = -2 / -2
Query: 807 VRKYVSTFGLCVVTARDARGKPRSQVLPKNLAGGILRDRIREENSVDPLVE 655
+ +Y+ + G A A G+P SQVLP++LA +L + EE+ VDPLVE
Sbjct: 531 LHEYLRSEGRPQRLAGYASGEPGSQVLPQDLA*RVLGH*VGEEDLVDPLVE 379
>gb|CK124865.1|CK124865 BES1824110k15 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010K1510 5-PRIME, mRNA sequence
Length = 630
Score = 333 bits (721), Expect = 1e-090
Identities = 134/181 (74%), Positives = 157/181 (86%)
Frame = +1 / +1
Query: 160 VLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYL 339
VL+MC AFA+EP KSGSCGTVVRNAELK+VDPDT SL RN PGEICIRG QIMKGYL
Sbjct: 19 VLSMCPAFAREPTPAKSGSCGTVVRNAELKVVDPDTGLSLARNLPGEICIRGPQIMKGYL 198
Query: 340 NDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHP 519
+DP AT TID +GWLHTGDIGYVDDDDE+FIVDR+KE+IK+KGFQVPPAELEALLI HP
Sbjct: 199 DDPVATAATIDVEGWLHTGDIGYVDDDDEVFIVDRVKELIKFKGFQVPPAELEALLIAHP 378
Query: 520 EIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIP 699
I DAAVV KD+ AGEVPVAF++R+ S+I+E IK+FV+K+VVFYKR+++V+FT +IP
Sbjct: 379 SIADAAVVPQKDDAAGEVPVAFVVRAADSDIAEEAIKEFVSKQVVFYKRLHKVYFTHAIP 558
Query: 700 K 702
K
Sbjct: 559 K 561
Score = 194 bits (418), Expect = 8e-049
Identities = 99/185 (53%), Positives = 107/185 (57%)
Frame = -3 / -2
Query: 713 PEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNATGTSPATSSFIETTA 534
P GI VK T TN L++ S +SE + R NATGTSPA SSF TTA
Sbjct: 572 PTPNLGIAWVKYTLCSLL*NTTCLDTNSLMASSAMSESAARTTNATGTSPAASSFCGTTA 393
Query: 533 ASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXXXXXPVCSHPSLSMVFFV 354
AS + GC M RASSSAGGTWKPL L+ PV SHPS SMV V
Sbjct: 392 ASAMEGCAMSRASSSAGGTWKPLNLMSSLTRSTMKTSSSSST*PMSPVWSHPSTSMVAAV 213
Query: 353 ASGSFR*PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKAR 174
A+GS R*PFMIC PRM ISPG R D VSGST SSA TTVP +PDL GSLA A
Sbjct: 212 ATGSSR*PFMICGPRMQISPGRLRARDRPVSGSTTLSSALRTTVPHDPDLAGVGSLANAG 33
Query: 173 HMAST 159
HM ST
Sbjct: 32 HMDST 18
Score = 81.7 bits (172), Expect(2) = 1e-022
Identities = 34/67 (50%), Positives = 43/67 (64%)
Frame = +3 / +3
Query: 168 HVPGLRQGAVRGQVRLLWHRRQERGAEDRRPRHQRVAGTEPARRDMHPRRTNHERLSE*S 347
HVPG+RQGA GQVR++ H +RGA+ RP H V +P RRD+HPR +HERL
Sbjct: 27 HVPGVRQGADAGQVRVVRHGGAQRGAQGGRPGHGPVPRPQPPRRDLHPRPADHERLPGRP 206
Query: 348 RGDKEHH 368
RG + H
Sbjct: 207 RGHRRDH 227
Score = 67.0 bits (140), Expect(3) = 2e-026
Identities = 33/67 (49%), Positives = 40/67 (59%)
Frame = -2 / -1
Query: 345 IIQITFHDLFAADAYLAWLVPSQRRAGVWVDDLQLRVPDDGATGAGLDLERLLGEGQAHG 166
++Q+ FHDL AADA LA V + +A V VD L+LRV A GL RL GE +AHG
Sbjct: 204 VVQVAFHDLRAADADLAGEVAGEGQARVRVDHLELRVAHHRAARPGLGRRRLPGERRAHG 25
Query: 165 QHGPRLG 145
QH G
Sbjct: 24 QHADLAG 4
Score = 65.7 bits (137), Expect(3) = 2e-026
Identities = 32/77 (41%), Positives = 44/77 (57%)
Frame = -2 / -1
Query: 594 AYNECHRDFAGDFIFHRDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXX 415
A++E HRD G I RD+ G+ D M DE+ +L RR+LEAL D LL V+DEDL
Sbjct: 453 AHHERHRDLTGGVILLRDDGGVGDGGMRDEQSLQLGRRHLEALELDELLDAVDDEDLVVV 274
Query: 414 XXXXXXXXVQPSVLING 364
V+P + ++G
Sbjct: 273 VDVADVAGVEPPLDVDG 223
Score = 45.1 bits (92), Expect(2) = 1e-022
Identities = 29/85 (34%), Positives = 42/85 (49%)
Frame = +3 / +3
Query: 447 EGDNQIQGLPSTSCGA*SPSHHTS*NQGCRCCLDER*SRRRSPGGIHYTQ*RL*DQ*ERD 626
+G +Q+QGLP + A +H S ++ R + * RR PGG+ + R * +
Sbjct: 306 QGAHQVQGLPGAAGRAGGSAHRASLHRRRRRRPAKG*RRR*GPGGVRGARRRF*HRRGGH 485
Query: 627 QAVCCKGGRVLQEDQQSFLHGFYPE 701
Q V + G VLQE Q LH P+
Sbjct: 486 QGVRIQAGGVLQEAAQGVLHPRDPQ 560
Score = 24.9 bits (48), Expect(3) = 2e-026
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2 / -1
Query: 702 LRDRIREENSVDPLVEH 652
L DR+ E + V PLVEH
Sbjct: 561 LGDRVGEVHLVQPLVEH 511
>gb|AL510457.1|AL510457 AL510457 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04P21u 3',
mRNA sequence
Length = 508
Score = 318 bits (689), Expect = 3e-086
Identities = 128/166 (77%), Positives = 142/166 (85%)
Frame = +1 / +1
Query: 91 DAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTS 270
DA ++P A+ GQGYGMTEAGPVL+MC AFA+EP KSGSCGTVVRNAELK+VDPDT
Sbjct: 1 DALRGRLPQAIFGQGYGMTEAGPVLSMCPAFAREPTPAKSGSCGTVVRNAELKVVDPDTG 180
Query: 271 ASLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLK 450
SL RN PGEICIRG QIMKGYL+DP AT TID +GWLHTGDIGYVDDDDE+FIVDR+K
Sbjct: 181 LSLARNLPGEICIRGPQIMKGYLDDPVATAATIDVEGWLHTGDIGYVDDDDEVFIVDRVK 360
Query: 451 EIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGEVPVAFI 588
E+IK+KGFQVPPAELEALLI HP I DAAVV KD+ AGEVPVAF+
Sbjct: 361 ELIKFKGFQVPPAELEALLIAHPSIADAAVVPQKDDAAGEVPVAFV 498
Score = 209 bits (451), Expect = 2e-053
Identities = 98/158 (62%), Positives = 102/158 (64%)
Frame = -3 / -3
Query: 584 NATGTSPATSSFIETTAASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXX 405
NATGTSPA SSF TTAAS + GC M RASSSAGGTWKPL L+
Sbjct: 494 NATGTSPAASSFCGTTAASAMEGCAMSRASSSAGGTWKPLNLMSSLTRSTMKTSSSSST* 315
Query: 404 XXXPVCSHPSLSMVFFVASGSFR*PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTT 225
PV SHPS SMV VA+GS R*PFMIC PRM ISPG R D VSGST SSA TT
Sbjct: 314 PMSPVWSHPSTSMVAAVATGSSR*PFMICGPRMQISPGRLRARDRPVSGSTTLSSALRTT 135
Query: 224 VPQEPDLTSNGSLAKARHMASTGPASVIPYPWPSTALG 111
VP +PDL GSLA A HM STGPASVIPYP P A G
Sbjct: 134 VPHDPDLAGVGSLANAGHMDSTGPASVIPYPCPKMACG 21
Score = 90.9 bits (192), Expect(2) = 1e-030
Identities = 42/77 (54%), Positives = 51/77 (66%)
Frame = -2 / -2
Query: 345 IIQITFHDLFAADAYLAWLVPSQRRAGVWVDDLQLRVPDDGATGAGLDLERLLGEGQAHG 166
++Q+ FHDL AADA LA V + +A V VD L+LRV A GL RL GE +AHG
Sbjct: 255 VVQVAFHDLRAADADLAGEVAGEGQARVRVDHLELRVAHHRAARPGLGRRRLPGERRAHG 76
Query: 165 QHGPRLGHPVPLAEHGV 115
QH PRL HPVPL+E G+
Sbjct: 75 QHRPRLRHPVPLSEDGL 25
Score = 81.7 bits (172), Expect(3) = 2e-022
Identities = 34/67 (50%), Positives = 43/67 (64%)
Frame = +3 / +3
Query: 168 HVPGLRQGAVRGQVRLLWHRRQERGAEDRRPRHQRVAGTEPARRDMHPRRTNHERLSE*S 347
HVPG+RQGA GQVR++ H +RGA+ RP H V +P RRD+HPR +HERL
Sbjct: 78 HVPGVRQGADAGQVRVVRHGGAQRGAQGGRPGHGPVPRPQPPRRDLHPRPADHERLPGRP 257
Query: 348 RGDKEHH 368
RG + H
Sbjct: 258 RGHRRDH 278
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 31/75 (41%), Positives = 42/75 (56%)
Frame = -2 / -2
Query: 588 NECHRDFAGDFIFHRDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXX 409
+E HRD G I RD+ G+ D M DE+ +L RR+LEAL D LL V+DEDL
Sbjct: 498 HERHRDLTGGVILLRDDGGVGDGGMRDEQSLQLGRRHLEALELDELLDAVDDEDLVVVVD 319
Query: 408 XXXXXXVQPSVLING 364
V+P + ++G
Sbjct: 318 VADVAGVEPPLDVDG 274
Score = 32.2 bits (64), Expect(3) = 2e-022
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2 / +2
Query: 125 SARGTG*PRRGPCWPCA 175
S RGTG* RRG C PCA
Sbjct: 35 SDRGTG*RRRGRCCPCA 85
Score = 29.9 bits (59), Expect(3) = 2e-022
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3 / +3
Query: 447 EGDNQIQGLPSTSCGA*SPSHHTS*NQGCRCCLDER*SRRRSPGGI 584
+G +Q+QGLP + A +H S ++ R + * RR PGG+
Sbjct: 357 QGAHQVQGLPGAAGRAGGSAHRASLHRRRRRRPAKG*RRR*GPGGV 494
>gb|BE193837.3|BE193837 HVSMEh0082K14f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0082K14f, mRNA sequence
Length = 803
Score = 299 bits (648), Expect = 1e-080
Identities = 128/152 (84%), Positives = 135/152 (88%)
Frame = +1 / +2
Query: 25 AADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFEV 204
A DLASIRMVMSGAAPMGK+LQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPF+V
Sbjct: 2 AGDLASIRMVMSGAAPMGKELQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFKV 181
Query: 205 KSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGW 384
KSGSCGTVVRNA LKIVDPDT A LGRNQPGEICIRGEQIMKGYL DP +TKNTIDKDGW
Sbjct: 182 KSGSCGTVVRNAGLKIVDPDTGAFLGRNQPGEICIRGEQIMKGYLIDP*STKNTIDKDGW 361
Query: 385 LHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQV 480
L TG+IG V+ DDEIFIV L+ +GF V
Sbjct: 362 LDTGNIGIVNYDDEIFIVTGLRRSSSTRGFHV 457
Score = 221 bits (478), Expect = 4e-057
Identities = 98/123 (79%), Positives = 100/123 (81%)
Frame = -3 / -3
Query: 392 VCSHPSLSMVFFVASGSFR*PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQE 213
V S PSLSMVF V GS R*PFMICSPRM ISPGWFRP A VSGSTI S A TTVP +
Sbjct: 369 VSSQPSLSMVFLVDYGSIR*PFMICSPRMQISPGWFRPRKAPVSGSTILSPALRTTVPHD 190
Query: 212 PDLTSNGSLAKARHMASTGPASVIPYPWPSTALGILAMNASWRSFPMGAAPDMTMRMEAR 33
PDLT NGSLA ARHMASTGPASVIPYP PSTALGILAM AS S PMGAAPDMTMRM+AR
Sbjct: 189 PDLTLNGSLANARHMASTGPASVIPYPCPSTALGILAMKASCSSLPMGAAPDMTMRMDAR 10
Query: 32 SAA 24
S A
Sbjct: 9 SPA 1
Score = 156 bits (335), Expect = 2e-037
Identities = 70/123 (56%), Positives = 83/123 (67%)
Frame = -2 / -2
Query: 447 QPVNDEDLXXXXXXXXXXXVQPSVLINGVLCRLWIIQITFHDLFAADAYLAWLVPSQRRA 268
+P N+EDL VQP++L++GVL LW+ ++TFHDL DA LA LVP + A
Sbjct: 424 EPCNNEDLVVVVDNADVSGVQPAILVDGVLGGLWVDKVTFHDLLPTDADLAGLVPPEEGA 245
Query: 267 GVWVDDLQLRVPDDGATGAGLDLERLLGEGQAHGQHGPRLGHPVPLAEHGVGDLGHERVL 88
GV V DL+ V A GLDLERLLGE QAHGQH P L HPVPL EHGVGDLGHE VL
Sbjct: 244 GVGVYDLEPGVAHHRAARPGLDLERLLGERQAHGQHRPGLRHPVPLPEHGVGDLGHEGVL 65
Query: 87 EVL 79
++L
Sbjct: 64 QLL 56
Score = 118 bits (252), Expect = 6e-026
Identities = 47/89 (52%), Positives = 58/89 (65%)
Frame = +3 / +1
Query: 69 AHGEGPPGRVHGQDPQXXXXXXXXXXXXXXXXXHVPGLRQGAVRGQVRLLWHRRQERGAE 248
AHG+G GR+HGQDPQ HVPG+RQGAV+GQVR++ H +R A+
Sbjct: 46 AHGQGAAGRLHGQDPQRRARAGVRDDGGRAGAGHVPGVRQGAVQGQVRVVRHGGAQRRAQ 225
Query: 249 DRRPRHQRVAGTEPARRDMHPRRTNHERL 335
DRRPRH+R+ EP RRD+HP NHERL
Sbjct: 226 DRRPRHRRLPRAEPTRRDLHPWGANHERL 312
>gb|CB882386.1|CB882386 HL01L15w HL Hordeum vulgare subsp. vulgare cDNA clone HL01L15
3-PRIME, mRNA sequence
Length = 490
Score = 287 bits (621), Expect = 8e-077
Identities = 121/139 (87%), Positives = 132/139 (94%)
Frame = +1 / +1
Query: 376 DGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKD 555
DGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITH EIKDAAVVSM+D
Sbjct: 7 DGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHAEIKDAAVVSMQD 186
Query: 556 EVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGKILRKDL 735
E+ GEVPVAFI+R EGSEISE+EIKQFVAKEVVFYKRI++VFF DS+PK+P+GKILRKDL
Sbjct: 187 ELTGEVPVAFIVRIEGSEISESEIKQFVAKEVVFYKRIHKVFFADSVPKSPAGKILRKDL 366
Query: 736 RARLAAGIPSSDNTQSKS* 792
RA+LAAGIP S +T SKS*
Sbjct: 367 RAKLAAGIPGSGSTASKS* 423
Score = 190 bits (410), Expect = 1e-047
Identities = 91/139 (65%), Positives = 95/139 (68%)
Frame = -3 / -3
Query: 791 QLLDCVLSLLGMPAASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSL 612
QLLD VL L GMPAAS ALRSFLRILP G FG ES KK TSFATNCLIS SL
Sbjct: 422 QLLDAVLPLPGMPAASFALRSFLRILPAGLFGTESAKKTLWILL*KTTSFATNCLISLSL 243
Query: 611 ISEPSLRIMNATGTSPATSSFIETTAASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXX 432
ISEPS+R MNATGTSP +SS I+TTAASLIS CVMRRASSSAGGTW PLYLI
Sbjct: 242 ISEPSIRTMNATGTSPVSSSCIDTTAASLISACVMRRASSSAGGTWNPLYLIISLSLSTM 63
Query: 431 XXXXXXXXXXXXPVCSHPS 375
PVC+ PS
Sbjct: 62 KISSSSST*PMSPVCNQPS 6
Score = 155 bits (332), Expect = 6e-037
Identities = 73/117 (62%), Positives = 82/117 (70%)
Frame = +3 / +3
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRCCLDER*SRRRSPGGIHYTQ*RL*DQ*E 620
QA+ DNQIQG+PSTSCG SPSH+T *NQ C CC+D R*+ S IH *RL*DQ E
Sbjct: 72 QAQRDNQIQGIPSTSCGTRSPSHYTR*NQRCCCCIDAR*TYW*STSCIHCAD*RL*DQRE 251
Query: 621 RDQAVCCKGGRVLQEDQQSFLHGFYPEESLRQDS*EGPESAACRGHPEQ*QHTVQKL 791
RDQAVCCK G LQ+D QSFL G EES RQD EGPES A HP Q +H+V +L
Sbjct: 252 RDQAVCCKRGCFLQKDPQSFLCGLGSEESCRQDPQEGPESKARCRHPRQWKHSV*EL 422
Score = 149 bits (319), Expect = 3e-035
Identities = 68/142 (47%), Positives = 87/142 (61%)
Frame = -2 / -2
Query: 801 KYVSTFGLCVVTARDARGKPRSQVLPKNLAGGILRDRIREENSVDPLVEHXXXXXXXXXX 622
++ S C TA DA + SQVLP++LAG LR+R+R+EN VDP VE+
Sbjct: 432 RWDSALRRCASTAWDACSELCSQVLPEDLAGRTLRNRVRKENFVDPFVENNLFCNKLLDL 253
Query: 621 XXXXLRAFTAYNECHRDFAGDFIFHRDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQP 442
LRAF +NEC+ F FI HR NS I DF +C+EKGF+ RRRYLE+LVFDYL +P
Sbjct: 252 ALADLRAFNPHNECNWYFTSKFILHRYNSSIFDFSVCNEKGFEFRRRYLESLVFDYLFEP 73
Query: 441 VNDEDLXXXXXXXXXXXVQPSV 376
V+DEDL VQP++
Sbjct: 72 VDDEDLVIIIDITDVSSVQPTI 7
Score = 92.7 bits (196), Expect(2) = 4e-025
Identities = 45/74 (60%), Positives = 54/74 (72%)
Frame = -1 / -1
Query: 802 KVRINFWTVCCHCSGCPRQAALSGPS*ESCRRDSSG*NP*RKLC*SSCRTRPPLQQTA*S 623
K+ ++ T+C HC GC ++A LSGPS* SCR+DSS +P RKLC S CR +P LQQTA*S
Sbjct: 433 KMGLSS*TLCFHCLGCLQRALLSGPS*GSCRQDSSEPSPQRKLCGSFCRKQPLLQQTA*S 254
Query: 622 RSH*SQSLHCV**M 581
RS *SQSL *M
Sbjct: 253 RSR*SQSLQSAQ*M 212
Score = 42.3 bits (86), Expect(2) = 4e-025
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -1 / -1
Query: 526 *FQDV**EGLQAPQEVLGSPCI*L 455
*FQ V**EGL+ PQEVLG PCI*L
Sbjct: 157 *FQRV**EGLRVPQEVLGIPCI*L 86
>gb|BF253382.2|BF253382 HVSMEf0001A07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001A07f, mRNA sequence
Length = 864
Score = 263 bits (569), Expect(2) = 4e-072
Identities = 113/125 (90%), Positives = 116/125 (92%)
Frame = +1 / +2
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 186
KS RV AADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVL+MCLAFA
Sbjct: 104 KSDRVTAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLSMCLAFA 283
Query: 187 KEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNT 366
KEPF VKSGSCGTVVRNAELKI +PDT A L RN PGEICIRG+QIMKGYL DPEATKNT
Sbjct: 284 KEPFAVKSGSCGTVVRNAELKIDNPDTGAYLARNLPGEICIRGKQIMKGYLCDPEATKNT 463
Query: 367 IDKDG 381
IDKDG
Sbjct: 464 IDKDG 478
Score = 230 bits (497), Expect = 1e-059
Identities = 103/125 (82%), Positives = 106/125 (84%)
Frame = -3 / -1
Query: 380 PSLSMVFFVASGSFR*PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLT 201
PSLSMVFFVASGS R*PFMIC PRM ISPG R A VSG +I SSAF TTVPQ+PDLT
Sbjct: 477 PSLSMVFFVASGSHR*PFMICLPRMQISPGRLRAR*APVSGLSILSSAFRTTVPQDPDLT 298
Query: 200 SNGSLAKARHMASTGPASVIPYPWPSTALGILAMNASWRSFPMGAAPDMTMRMEARSAAP 21
+NGSLA ARHM STGPASVIPYP PSTALGILAM ASWRS PMGAAPDMTMRMEARSAA
Sbjct: 297 ANGSLANARHMDSTGPASVIPYPCPSTALGILAMKASWRSLPMGAAPDMTMRMEARSAAV 118
Query: 20 TRGLL 6
TR LL
Sbjct: 117 TRSLL 103
Score = 146 bits (314), Expect = 2e-034
Identities = 67/101 (66%), Positives = 74/101 (73%)
Frame = -2 / -3
Query: 381 SVLINGVLCRLWIIQITFHDLFAADAYLAWLVPSQRRAGVWVDDLQLRVPDDGATGAGLD 202
++L+NGVLC L I +TFHDL AADA L V + AGV V DL+LRVP A G LD
Sbjct: 478 TILVNGVLCGLRIT*VTFHDLLAADADLPGQVAGEVGAGVGVVDLELRVPHHRAAGPRLD 299
Query: 201 LERLLGEGQAHGQHGPRLGHPVPLAEHGVGDLGHERVLEVL 79
ERLLGE QAHGQH P L HPVPL+EHGVGDLGHE VLEVL
Sbjct: 298 GERLLGERQAHGQHRPGLRHPVPLSEHGVGDLGHEGVLEVL 176
Score = 140 bits (300), Expect = 1e-032
Identities = 58/103 (56%), Positives = 70/103 (67%)
Frame = +3 / +1
Query: 69 AHGEGPPGRVHGQDPQXXXXXXXXXXXXXXXXXHVPGLRQGAVRGQVRLLWHRRQERGAE 248
AHG+GPPGR+HGQDPQ HVPG+RQGAVR QV +L H ERGA+
Sbjct: 166 AHGQGPPGRLHGQDPQRRARTGVRDDGGRAGAVHVPGVRQGAVRRQVGVLRHGGAERGAQ 345
Query: 249 DRRPRHQRVAGTEPARRDMHPRRTNHERLSE*SRGDKEHH**G 377
DR+PRH+R+ +PAR D+HPR+ +HERL *S G KEHH* G
Sbjct: 346 DRQPRHRRLPRPQPARGDLHPRQADHERLPM*SGGHKEHH*QG 474
Score = 29.0 bits (57), Expect(2) = 4e-072
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +3
Query: 382 WLHTGDIGY 408
WLHTGDIGY
Sbjct: 480 WLHTGDIGY 506
>gb|CK123691.1|CK123691 BES1824105b17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B175 5-PRIME, mRNA sequence
Length = 801
Score = 161 bits (347), Expect(2) = 2e-069
Identities = 69/73 (94%), Positives = 70/73 (95%)
Frame = +1 / +2
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 186
KS RV AADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVL+MCLAFA
Sbjct: 410 KSDRVTAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLSMCLAFA 589
Query: 187 KEPFEVKSGSCGT 225
KEPF VKSGSCGT
Sbjct: 590 KEPFAVKSGSCGT 628
Score = 150 bits (323), Expect(2) = 4e-049
Identities = 64/73 (87%), Positives = 66/73 (90%)
Frame = -3 / -1
Query: 224 VPQEPDLTSNGSLAKARHMASTGPASVIPYPWPSTALGILAMNASWRSFPMGAAPDMTMR 45
VPQ+PDLT+NGSLA ARHM STGPASVIPYP PSTALGILAM ASWRS PMGAAPDMTMR
Sbjct: 627 VPQDPDLTANGSLANARHMDSTGPASVIPYPCPSTALGILAMKASWRSLPMGAAPDMTMR 448
Query: 44 MEARSAAPTRGLL 6
MEARSAA TR LL
Sbjct: 447 MEARSAAVTRSLL 409
Score = 121 bits (259), Expect(2) = 2e-069
Identities = 49/59 (83%), Positives = 51/59 (86%)
Frame = +1 / +3
Query: 211 GSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWL 387
G VVRNAELKIVDPDT ASL RN PGEICIRG+QIMKGYLNDPEATKNT+ KDGWL
Sbjct: 615 GPAARVVRNAELKIVDPDTGASLARNWPGEICIRGKQIMKGYLNDPEATKNTLXKDGWL 791
Score = 94.1 bits (199), Expect(2) = 1e-024
Identities = 48/95 (50%), Positives = 53/95 (55%)
Frame = -3 / -3
Query: 389 CSHPSLSMVFFVASGSFR*PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEP 210
C+ PS VFFVASGSFR*PFMIC PRM ISPG R +A VSGSTI SSAF TT P
Sbjct: 793 CNQPSXFNVFFVASGSFR*PFMICLPRMQISPGQLRAREAPVSGSTILSSAFRTTRAAGP 614
Query: 209 DLTSNGSLAKARHMASTGPASVIPYPWPSTALGIL 105
L L + + P P P +G L
Sbjct: 613 RLDGERLLGERQAHGQHRPGLRHPVPLSEHGVGDL 509
Score = 89.5 bits (189), Expect(2) = 2e-022
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = -2 / -3
Query: 222 ATGAGLDLERLLGEGQAHGQHGPRLGHPVPLAEHGVGDLGHERVLEVL 79
A G LD ERLLGE QAHGQH P L HPVPL+EHGVGDLGHE VLEVL
Sbjct: 625 AAGPRLDGERLLGERQAHGQHRPGLRHPVPLSEHGVGDLGHEGVLEVL 482
Score = 69.8 bits (146), Expect(2) = 3e-025
Identities = 28/52 (53%), Positives = 32/52 (61%)
Frame = +3 / +1
Query: 69 AHGEGPPGRVHGQDPQXXXXXXXXXXXXXXXXXHVPGLRQGAVRGQVRLLWH 224
AHG+GPPGR+HGQDPQ HVPG+RQGAVR QV +L H
Sbjct: 472 AHGQGPPGRLHGQDPQRRARTGVRDDGGRAGAVHVPGVRQGAVRRQVGVLRH 627
Score = 65.7 bits (137), Expect(2) = 3e-025
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = +3 / +2
Query: 234 ERGAEDRRPRHQRVAGTEPARRDMHPRRTNHERLSE*SRGDKEH 365
ERGA+DRRPRH+R+ + A D+HPR+ +HERL +*S G KEH
Sbjct: 638 ERGAQDRRPRHRRLPRPQLAWGDLHPRQADHERLPK*SGGHKEH 769
Score = 64.8 bits (135), Expect(2) = 4e-049
Identities = 31/52 (59%), Positives = 36/52 (69%)
Frame = -2 / -2
Query: 387 QPSVLINGVLCRLWIIQITFHDLFAADAYLAWLVPSQRRAGVWVDDLQLRVP 232
QP++L VLC L II +TFHDL AADA L V + AGV VDDL+LRVP
Sbjct: 791 QPTILXQCVLCGLRII*VTFHDLLAADADLPRPVAGEGGAGVGVDDLELRVP 636
Score = 39.6 bits (80), Expect(2) = 1e-024
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -1 / -2
Query: 112 GSWP*TRPGGPSPWA 68
GSWP* RPGGP PWA
Sbjct: 515 GSWP*RRPGGPCPWA 471
Score = 36.8 bits (74), Expect(2) = 2e-022
Identities = 20/44 (45%), Positives = 20/44 (45%)
Frame = -1 / -1
Query: 388 AAIRPYQWCSLSPLDHSDNLS*FVRRGCISRLAGSVPATRWCLG 257
A P CSL P DH NLS* RGC S A R C G
Sbjct: 792 ATNHPXSMCSLWPPDHLGNLS*SACRGCRSPQASCGRGRRRCRG 661
>gb|BG414540.1|BG414540 HVSMEk0002N03f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002N03f, mRNA sequence
Length = 876
Score = 193 bits (416), Expect(3) = 4e-066
Identities = 69/125 (55%), Positives = 104/125 (83%)
Frame = +1 / +3
Query: 373 KDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMK 552
+ GWLHTGD+GY D++ ++F+VDRLKE+IKYKGFQ+ PAELE LL++HPEI DA V+
Sbjct: 291 RQGWLHTGDLGYFDEEGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 470
Query: 553 DEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGKILRKD 732
D+ AGEVP+A+++RS S ++E ++++F+AK+V +YKR+ RV F +S+PK+ +GKILR++
Sbjct: 471 DDEAGEVPIAYVVRSPASSLTEVDVQKFIAKQVTYYKRLRRVTFVESVPKSAAGKILRRE 650
Query: 733 LRARL 747
L A++
Sbjct: 651 LIAQV 665
Score = 65.2 bits (136), Expect(3) = 4e-066
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +1 / +3
Query: 211 GSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTI 369
GS GT+V E K++D +T L +Q GEICIRG IM+GY N+ EAT+ TI
Sbjct: 132 GSTGTLVVGVEAKVIDVETQKHLPPSQLGEICIRGPHIMQGYFNNVEATEFTI 290
Score = 32.7 bits (65), Expect(3) = 4e-066
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1 / +3
Query: 76 GKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAM 171
G+D+ + P+A + QGYGMTE ++++
Sbjct: 3 GRDVMEVVAKNFPDAEIVQGYGMTETCGIISL 98
>gb|BF064865.2|BF064865 HV_CEb0021D12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021D12f, mRNA sequence
Length = 806
Score = 248 bits (535), Expect = 6e-065
Identities = 96/175 (54%), Positives = 130/175 (74%)
Frame = +1 / +3
Query: 211 GSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLH 390
G+ G + N E KIVDP+T +L N+ GE+ IRG +MKGY + EAT++T+ DGWL
Sbjct: 75 GTAGLLSPNTEAKIVDPETGEALPVNRTGELWIRGPYVMKGYFKNTEATQSTVTPDGWLK 254
Query: 391 TGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGE 570
TGD+ Y+D+D +F+VDRLKE+IKYKG+QVPPAELEALL+THPE+ D AV+ D G+
Sbjct: 255 TGDLCYIDEDGYLFVVDRLKELIKYKGYQVPPAELEALLLTHPEVSDVAVIPFPDREVGQ 434
Query: 571 VPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGKILRKDL 735
P+A+++R +GS +S E+ +FVAK+V YK++ +V F IPKN SGKILRKDL
Sbjct: 435 FPMAYVVRKKGSNLSAQEVMEFVAKQVAPYKKVRKVAFVTDIPKNASGKILRKDL 599
>gb|BI959839.1|BI959839 HVSMEn0021P10f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021P10f, mRNA sequence
Length = 657
Score = 175 bits (377), Expect(2) = 1e-058
Identities = 72/85 (84%), Positives = 84/85 (98%)
Frame = +1 / -1
Query: 508 ITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFT 687
ITHPEIKDAAVVS+KD++AGEVP+AF++R EGSEI+E++IK+FVAKEVVFYKRI++VFFT
Sbjct: 552 ITHPEIKDAAVVSLKDDLAGEVPIAFVMRIEGSEITEDDIKKFVAKEVVFYKRIHKVFFT 373
Query: 688 DSIPKNPSGKILRKDLRARLAAGIP 762
DSIPKNPSGKILRKDLRARLAAGIP
Sbjct: 372 DSIPKNPSGKILRKDLRARLAAGIP 298
Score = 127 bits (273), Expect(2) = 2e-035
Identities = 62/86 (72%), Positives = 67/86 (77%)
Frame = -3 / +2
Query: 764 LGMPAASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIM 585
LGMPAAS AL+SFLRILPEGF GIESVKK TSFATN L+S S+ISEPS+RI
Sbjct: 296 LGMPAASLALKSFLRILPEGFLGIESVKKTLWILL*KTTSFATNFLMSSSVISEPSIRIT 475
Query: 584 NATGTSPATSSFIETTAASLISGCVM 507
A GTSPA SSF +TTAASLISG VM
Sbjct: 476 KAIGTSPARSSFSDTTAASLISGWVM 553
Score = 71.6 bits (150), Expect(2) = 1e-058
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +1 / -3
Query: 409 VDDDDEIFIVDRLKEIIKYKGFQVPPAELEA 501
VDDDDEIFIVDRLKEIIKYKGFQV PAELEA
Sbjct: 652 VDDDDEIFIVDRLKEIIKYKGFQVAPAELEA 560
Score = 41.8 bits (85), Expect(2) = 2e-035
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -2 / +2
Query: 501 GFKLRRRYLEALVFDYLLQPVNDEDL 424
G L RR+LEALV D LL+PVN+EDL
Sbjct: 560 GLXLCRRHLEALVLDDLLEPVNNEDL 637
>gb|BI959998.1|BI959998 HVSMEn0022N01f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0022N01f, mRNA sequence
Length = 629
Score = 221 bits (476), Expect = 8e-057
Identities = 94/105 (89%), Positives = 97/105 (92%)
Frame = +1 / +1
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 186
KSP+V A DLASIRMVMSGAAPMGK+LQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA
Sbjct: 229 KSPQVTAGDLASIRMVMSGAAPMGKELQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 408
Query: 187 KEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQ 321
KEPF+VKSGSCGTVVRNA LKIVDPDT A L N PGEICIRGEQ
Sbjct: 409 KEPFKVKSGSCGTVVRNARLKIVDPDTGAFLRPNHPGEICIRGEQ 543
Score = 186 bits (400), Expect = 2e-046
Identities = 82/106 (77%), Positives = 85/106 (80%)
Frame = -3 / -1
Query: 323 ICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMASTGPASV 144
+CSPRM ISPGWF A VSGSTI S A TTVP +PDLT NGSLA ARHMASTGPASV
Sbjct: 545 VCSPRMQISPGWFGRRKAPVSGSTILSRALRTTVPHDPDLTLNGSLANARHMASTGPASV 366
Query: 143 IPYPWPSTALGILAMNASWRSFPMGAAPDMTMRMEARSAAPTRGLL 6
IPYP PSTALGILAM AS S PMGAAPDMTMRM+ARS A T GLL
Sbjct: 365 IPYPCPSTALGILAMKASCSSLPMGAAPDMTMRMDARSPAVTWGLL 228
Score = 115 bits (245), Expect = 6e-025
Identities = 53/84 (63%), Positives = 59/84 (70%)
Frame = -2 / -3
Query: 330 FHDLFAADAYLAWLVPSQRRAGVWVDDLQLRVPDDGATGAGLDLERLLGEGQAHGQHGPR 151
F L ADA LA +V ++ AGV VDDL+ V A GLDLERLLGE QAHGQH P
Sbjct: 552 FMSLLPADADLAGVVRAEEGAGVGVDDLEPGVAHHRAARPGLDLERLLGERQAHGQHRPG 373
Query: 150 LGHPVPLAEHGVGDLGHERVLEVL 79
L HPVPL EHGVGDLGHE VL++L
Sbjct: 372 LRHPVPLPEHGVGDLGHEGVLQLL 301
Score = 111 bits (236), Expect = 1e-023
Identities = 44/85 (51%), Positives = 55/85 (64%)
Frame = +3 / +3
Query: 69 AHGEGPPGRVHGQDPQXXXXXXXXXXXXXXXXXHVPGLRQGAVRGQVRLLWHRRQERGAE 248
AHG+G GR+HGQDPQ HVPG+RQGAV+GQVR++ H +R A+
Sbjct: 291 AHGQGAAGRLHGQDPQRRARAGVRDDGGRAGAGHVPGVRQGAVQGQVRVVRHGGAQRPAQ 470
Query: 249 DRRPRHQRVAGTEPARRDMHPRRTN 323
DRRPRH+R+ EP RRD+HPR N
Sbjct: 471 DRRPRHRRLPPPEPPRRDLHPRGAN 545
>gb|AV916926.1|AV916926 AV916926 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20b24 5', mRNA sequence
Length = 547
Score = 165 bits (355), Expect(3) = 3e-056
Identities = 58/102 (56%), Positives = 85/102 (83%)
Frame = +1 / +2
Query: 373 KDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMK 552
+ GWLHTGD+GY D++ ++F+VDRLKE+IKYKGFQ+ PAELE LL++HPEI DA V+
Sbjct: 173 RQGWLHTGDLGYFDEEGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFP 352
Query: 553 DEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRV 678
D+ AGEVP+A+++RS S ++E ++++F+AK+V +YKR+ RV
Sbjct: 353 DDEAGEVPIAYVVRSPASSLTEVDVQKFIAKQVTYYKRLRRV 478
Score = 61.1 bits (127), Expect(3) = 3e-056
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +1 / +2
Query: 220 GTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTI 369
GT+V E K++D +T L +Q GEICIRG IM+GY N+ EAT+ TI
Sbjct: 23 GTLVVGVEAKVIDVETQKHLPPSQLGEICIRGPHIMQGYFNNVEATEFTI 172
Score = 31.3 bits (62), Expect(3) = 3e-056
Identities = 11/21 (52%), Positives = 18/21 (85%)
Frame = +1 / +3
Query: 682 FTDSIPKNPSGKILRKDLRAR 744
F +S+PK+ +GKILR++L A+
Sbjct: 483 FVESVPKSAAGKILRRELIAQ 545
>gb|AL507037.1|AL507037 AL507037 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04P21T 5',
mRNA sequence
Length = 700
Score = 180 bits (387), Expect(2) = 2e-052
Identities = 72/109 (66%), Positives = 95/109 (87%)
Frame = +1 / -2
Query: 424 EIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEG 603
++ IVDR+KE+IK+KGFQVPPAELEA LI HP I DAAVV KD+ AGEVPVAF++R+
Sbjct: 627 KVXIVDRVKELIKFKGFQVPPAELEAXLIAHPSIADAAVVPQKDDAAGEVPVAFVVRAAD 448
Query: 604 SEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGKILRKDLRARLA 750
S+I+E IK+FV+K+VVFYKR+++V+FT +IPK+ SGKILRK+LRA+L+
Sbjct: 447 SDIAEEAIKEFVSKQVVFYKRLHKVYFTHAIPKSASGKILRKELRAKLS 301
Score = 103 bits (220), Expect = 2e-021
Identities = 52/97 (53%), Positives = 59/97 (60%)
Frame = -3 / +2
Query: 746 SRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNATGTS 567
S AL SFL I P+ GI VK T TN L++ S +SE + R NATGTS
Sbjct: 305 SLALSSFLSIFPDADLGIAWVKYTLCSLL*NTTCLDTNSLMASSAMSESAARTTNATGTS 484
Query: 566 PATSSFIETTAASLISGCVMRRASSSAGGTWKPLYLI 456
PA SSF TTAAS + GC M ASSSAGGTWKPL L+
Sbjct: 485 PAASSFCGTTAASAMEGCAMSXASSSAGGTWKPLNLM 595
Score = 46.9 bits (96), Expect(2) = 2e-052
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / -3
Query: 358 KNTIDKDGWLHTGDIGYVDDD 420
+ ID +GWLHTGDIGYVDDD
Sbjct: 695 RRPIDVEGWLHTGDIGYVDDD 633
>gb|CA007491.1|CA007491 HU08C03r HU Hordeum vulgare subsp. vulgare cDNA clone HU08C03
5-PRIME, mRNA sequence
Length = 581
Score = 176 bits (378), Expect(2) = 2e-051
Identities = 67/125 (53%), Positives = 92/125 (73%)
Frame = +1 / +1
Query: 211 GSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLH 390
G+ G + N E KIV P+T +L N+ GE+ IRG +MKGY + EAT++T+ DGWL
Sbjct: 205 GTAGLLSPNTEAKIVPPETGEALPVNRTGELWIRGPYVMKGYFKNTEATQSTVTPDGWLK 384
Query: 391 TGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGE 570
TGD+ Y+D+D +F+VDRLKE+IKYKG+Q+PPAELEALL+THPE+ D AV+ D G+
Sbjct: 385 TGDLCYIDEDGYLFVVDRLKELIKYKGYQLPPAELEALLLTHPEVSDVAVIPFPDREVGQ 564
Query: 571 VPVAF 585
P+A+
Sbjct: 565 FPMAY 579
Score = 47.3 bits (97), Expect(2) = 2e-051
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +1 / +1
Query: 34 LASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEA 153
L ++R V+SG AP+ K+L + F K P + QGYG+TE+
Sbjct: 37 LGNLRKVLSGGAPLSKELIEGFRDKYPQVEILQGYGLTES 156
>gb|AV833853.1|AV833853 AV833853 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp.
vulgare cDNA clone bags8m01, mRNA sequence
Length = 599
Score = 164 bits (352), Expect(4) = 6e-051
Identities = 68/81 (83%), Positives = 80/81 (98%)
Frame = +1 / +3
Query: 523 IKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPK 702
IKDAAVVS+KD++AGEVP+AF++R EGSEI+E++IK+FVAKEVVFYKRI++VFFTDSIPK
Sbjct: 168 IKDAAVVSLKDDLAGEVPIAFVMRIEGSEITEDDIKKFVAKEVVFYKRIHKVFFTDSIPK 347
Query: 703 NPSGKILRKDLRARLAAGIPS 765
NPSGKILRKDLRARLAAGIPS
Sbjct: 348 NPSGKILRKDLRARLAAGIPS 410
Score = 118 bits (252), Expect(2) = 3e-031
Identities = 57/80 (71%), Positives = 62/80 (77%)
Frame = -3 / -2
Query: 764 LGMPAASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIM 585
LGMPAAS AL+SFLRILPEGF GIESVKK TSFATN L+S S+ISEPS+RI
Sbjct: 409 LGMPAASLALKSFLRILPEGFLGIESVKKTLWILL*KTTSFATNFLMSSSVISEPSIRIT 230
Query: 584 NATGTSPATSSFIETTAASL 525
A GTSPA SSF +TTAASL
Sbjct: 229 KAIGTSPARSSFSDTTAASL 170
Score = 48.3 bits (99), Expect(4) = 6e-051
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / +1
Query: 427 IFIVDRLKEIIKYKGFQVPPA 489
IFIVDRLKEIIKYKGFQV PA
Sbjct: 70 IFIVDRLKEIIKYKGFQVAPA 132
Score = 37.3 bits (75), Expect(2) = 3e-031
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -2 / -3
Query: 486 RRYLEALVFDYLLQPVNDED 427
RR+LEALV D LL+PVN+ED
Sbjct: 129 RRHLEALVLDDLLEPVNNED 70
Score = 23.5 bits (45), Expect(4) = 6e-051
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 493 LEALLITHP 519
LEALLITHP
Sbjct: 137 LEALLITHP 163
Score = 22.1 bits (42), Expect(4) = 6e-051
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / +3
Query: 400 IGYVDDDDE 426
IG VDDDDE
Sbjct: 42 IGIVDDDDE 68
>gb|AV918175.1|AV918175 AV918175 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20b24 3', mRNA sequence
Length = 664
Score = 133 bits (286), Expect(3) = 2e-050
Identities = 50/100 (50%), Positives = 78/100 (78%)
Frame = +1 / -3
Query: 448 KEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEI 627
K + KGFQ+ PAELE LL++HPEI DA V+ D+ AGEVP+A+++RS S ++E ++
Sbjct: 518 KS*LSTKGFQIAPAELEGLLLSHPEILDAVVIPFPDDEAGEVPIAYVVRSPASSLTEVDV 339
Query: 628 KQFVAKEVVFYKRINRVFFTDSIPKNPSGKILRKDLRARL 747
++F+AK+V +YKR+ RV F +S+PK+ +GKILR++L A++
Sbjct: 338 QKFIAKQVTYYKRLRRVTFVESVPKSAAGKILRRELIAQV 219
Score = 67.0 bits (140), Expect(3) = 2e-050
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1 / -2
Query: 361 NTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGF 474
N + GWLHTGD+GY + + ++F+VDRLKE+IKYKGF
Sbjct: 606 NLQSRQGWLHTGDLGYFE*EGQLFVVDRLKELIKYKGF 493
Score = 37.7 bits (76), Expect(3) = 2e-050
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1 / -1
Query: 301 ICIRGEQIMKGYLNDPEATKNTI 369
ICIRG IM+GY N+ EAT+ TI
Sbjct: 664 ICIRGPHIMQGYFNNVEATEFTI 596
>gb|BU986484.1|BU986484 HF12A02r HF Hordeum vulgare subsp. vulgare cDNA clone HF12A02
5-PRIME, mRNA sequence
Length = 577
Score = 197 bits (425), Expect = 8e-050
Identities = 76/141 (53%), Positives = 107/141 (75%)
Frame = +1 / +1
Query: 313 GEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAE 492
G +MKGY+ D +AT T+D +GWL TGD+ Y ++D ++IVDRLKE+IKYKG+QVPPAE
Sbjct: 10 GPLVMKGYVGDDKATAETVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAE 189
Query: 493 LEALLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRIN 672
LE +L +HPEI DAAV+ DE G++P+AFI+R GS ++ ++ +VAK V YK++
Sbjct: 190 LEHILQSHPEIADAAVIGYPDEDVGQLPMAFIVRQPGSSLTGKQVMDYVAKHVAPYKKVR 369
Query: 673 RVFFTDSIPKNPSGKILRKDL 735
RV F +IPK+P+GKILR++L
Sbjct: 370 RVAFVAAIPKSPAGKILRREL 432
>gb|BF260187.2|BF260187 HVSMEf0021F10f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021F10f, mRNA sequence
Length = 859
Score = 184 bits (397), Expect(3) = 1e-048
Identities = 79/94 (84%), Positives = 82/94 (87%)
Frame = +1 / +2
Query: 16 RVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEP 195
RV DLA IRMVMSGAAPMGKDLQDAFM KIPNAVLGQGYGMTE GPVL+MCLAFAKEP
Sbjct: 119 RVTGGDLAFIRMVMSGAAPMGKDLQDAFMGKIPNAVLGQGYGMTEGGPVLSMCLAFAKEP 298
Query: 196 FEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPG 297
F V+SGSCGT VRNA+LKIVDPDT A LGRN G
Sbjct: 299 FGVQSGSCGTGVRNADLKIVDPDTGAFLGRNLAG 400
Score = 156 bits (335), Expect(2) = 3e-040
Identities = 71/96 (73%), Positives = 73/96 (76%)
Frame = -3 / -2
Query: 296 PGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMASTGPASVIPYPWPSTA 117
P FRP A VSGSTI SAF T VPQ+PD T NGSLA ARHM STGP SVIPYP PSTA
Sbjct: 399 PARFRPRKAPVSGSTILRSAFRTPVPQDPDWTPNGSLANARHMDSTGPPSVIPYPCPSTA 220
Query: 116 LGILAMNASWRSFPMGAAPDMTMRMEARSAAPTRGL 9
LGIL M AS RS PMGAAPDMTMRM+ARS TR L
Sbjct: 219 LGILPMKAS*RSLPMGAAPDMTMRMKARSPPVTRSL 112
Score = 105 bits (223), Expect = 6e-022
Identities = 44/70 (62%), Positives = 52/70 (74%)
Frame = -2 / -1
Query: 288 VPSQRRAGVWVDDLQLRVPDDGATGAGLDLERLLGEGQAHGQHGPRLGHPVPLAEHGVGD 109
VP++ GV V+D ++RVP A G LD ERLLGE QAHGQH P L HPVPL++HGVGD
Sbjct: 391 VPAKEGPGVGVNDFKIRVPHPRAAGPRLDAERLLGERQAHGQHRPALRHPVPLSKHGVGD 212
Query: 108 LGHERVLEVL 79
L HE VL+VL
Sbjct: 211 LAHEGVLKVL 182
Score = 29.5 bits (58), Expect(2) = 3e-040
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3 / -1
Query: 338 R*PFMICSPRMHISPG 291
R PF+IC PR ISPG
Sbjct: 442 RKPFIICFPRKQISPG 395
Score = 24.9 bits (48), Expect(3) = 1e-048
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / +1
Query: 346 PEATKNTIDKDGWLHT 393
P A KNT+D+DG + T
Sbjct: 451 PGAPKNTLDQDGLVDT 498
Score = 23.1 bits (44), Expect(3) = 1e-048
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1 / +2
Query: 382 WLHTGDIGYVDD 417
WL GDI Y DD
Sbjct: 488 WLTLGDIRYCDD 523
>gb|BG418054.1|BG418054 HVSMEk0021B11f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0021B11f, mRNA sequence
Length = 491
Score = 174 bits (375), Expect = 7e-043
Identities = 69/134 (51%), Positives = 96/134 (71%)
Frame = +1 / +1
Query: 214 SCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHT 393
S G + + + KIVDP T +L Q GE+ I+G +MKGY+ D +AT T+D +GWL T
Sbjct: 82 SVGKLASHLQAKIVDPSTGEALWPGQRGELLIKGPLVMKGYVGDDKATAETVDSEGWLKT 261
Query: 394 GDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGEV 573
GD+ Y ++D ++IVDRLKE+IKYKG+Q PPAELE +L +HPEI DAAV+ DE G++
Sbjct: 262 GDLCYFNEDGFLYIVDRLKELIKYKGYQGPPAELEHILQSHPEIADAAVIGYPDEDVGQL 441
Query: 574 PVAFIIRSEGSEIS 615
P+AFI+R GS ++
Sbjct: 442 PMAFIVRQPGSSLT 483
>gb|BE411374.1|BE411374 ISC004.H10F990609 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC004.H10, mRNA sequence
Length = 492
Score = 143 bits (307), Expect(2) = 3e-039
Identities = 62/71 (87%), Positives = 64/71 (90%)
Frame = +1 / +1
Query: 1 RGKSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLA 180
R + RV AADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVL+MCLA
Sbjct: 139 RQVATRVTAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLSMCLA 318
Query: 181 FAKEPFEVKSG 213
FAKEPF K G
Sbjct: 319 FAKEPFAXKXG 351
Score = 131 bits (280), Expect = 8e-030
Identities = 56/65 (86%), Positives = 57/65 (87%)
Frame = -3 / -2
Query: 212 PDLTSNGSLAKARHMASTGPASVIPYPWPSTALGILAMNASWRSFPMGAAPDMTMRMEAR 33
P L +NGSLA ARHM STGPASVIPYP PSTALGILAM ASWRS PMGAAPDMTMRMEAR
Sbjct: 350 PXLXANGSLANARHMDSTGPASVIPYPCPSTALGILAMKASWRSLPMGAAPDMTMRMEAR 171
Query: 32 SAAPT 18
SAA T
Sbjct: 170 SAAVT 156
Score = 39.1 bits (79), Expect(2) = 3e-039
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +1 / +2
Query: 205 KSGSCGTVVRNAELKIVDP 261
+ GSCGTVVRN ELKIV P
Sbjct: 344 RXGSCGTVVRNVELKIVXP 400
>gb|BE215262.2|BE215262 HV_CEb0006F04f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006F04f, mRNA sequence
Length = 476
Score = 158 bits (339), Expect = 6e-038
Identities = 64/78 (82%), Positives = 73/78 (93%)
Frame = +1 / +3
Query: 31 DLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFEVKS 210
DL+S+RMV+SGAAPMGK+LQD AK+PNAVLGQGYGMTEAGPVL+MC+AFAKEP VKS
Sbjct: 243 DLSSVRMVISGAAPMGKELQDIIHAKLPNAVLGQGYGMTEAGPVLSMCMAFAKEPSPVKS 422
Query: 211 GSCGTVVRNAELKIVDPD 264
G+CGTVVRNAELKIVDP+
Sbjct: 423 GACGTVVRNAELKIVDPE 476
Score = 122 bits (262), Expect = 3e-027
Identities = 56/78 (71%), Positives = 59/78 (75%)
Frame = -3 / -2
Query: 263 SGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMASTGPASVIPYPWPSTALGILAMNASWR 84
SGSTI SSAFLTTVP PD T +GSLA A H+ STGPASVIP P PSTALG LA S
Sbjct: 475 SGSTILSSAFLTTVPHAPDFTGDGSLANAMHIDSTGPASVIP*PCPSTALGSLAWMMSCS 296
Query: 83 SFPMGAAPDMTMRMEARS 30
S PMGAAP+MTMR E RS
Sbjct: 295 SLPMGAAPEMTMRTEERS 242
>gb|BE411643.1|BE411643 ISC007.G04F990714 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC007.G04, mRNA sequence
Length = 494
Score = 133 bits (284), Expect(2) = 5e-033
Identities = 57/61 (93%), Positives = 59/61 (96%)
Frame = +1 / +2
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 186
KS RV AADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVL+MCLAFA
Sbjct: 143 KSDRVTAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLSMCLAFA 322
Query: 187 K 189
+
Sbjct: 323 R 325
Score = 124 bits (266), Expect(2) = 3e-030
Identities = 54/61 (88%), Positives = 54/61 (88%)
Frame = -3 / -3
Query: 188 LAKARHMASTGPASVIPYPWPSTALGILAMNASWRSFPMGAAPDMTMRMEARSAAPTRGL 9
LA ARHM STGPASVIPYP PSTALGILAM ASWRS PMGAAPDMTMRMEARSAA TR L
Sbjct: 324 LANARHMDSTGPASVIPYPCPSTALGILAMKASWRSLPMGAAPDMTMRMEARSAAVTRSL 145
Query: 8 L 6
L
Sbjct: 144 L 142
Score = 28.6 bits (56), Expect(2) = 5e-033
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1 / +3
Query: 202 VKSGSCGTVVR 234
VKSGSCGTVVR
Sbjct: 336 VKSGSCGTVVR 368
Score = 27.6 bits (54), Expect(2) = 3e-030
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3 / -2
Query: 230 TTVPQEPDLTSNGSLAKARH 171
TTVPQ+PDLT + H
Sbjct: 364 TTVPQDPDLTRTAPCERQAH 305
>gb|CA012845.1|CA012845 HT06J23r HT Hordeum vulgare subsp. vulgare cDNA clone HT06J23
5-PRIME, mRNA sequence
Length = 684
Score = 130 bits (278), Expect = 2e-029
Identities = 56/59 (94%), Positives = 57/59 (96%)
Frame = +1 / +3
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAF 183
KS RV AADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVL+MCLAF
Sbjct: 507 KSDRVTAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLSMCLAF 683
Score = 121 bits (258), Expect = 9e-027
Identities = 52/58 (89%), Positives = 52/58 (89%)
Frame = -3 / -3
Query: 179 ARHMASTGPASVIPYPWPSTALGILAMNASWRSFPMGAAPDMTMRMEARSAAPTRGLL 6
ARHM STGPASVIPYP PSTALGILAM ASWRS PMGAAPDMTMRMEARSAA TR LL
Sbjct: 679 ARHMDSTGPASVIPYPCPSTALGILAMKASWRSLPMGAAPDMTMRMEARSAAVTRSLL 506
>gb|AL502418.1|AL502418 AL502418 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I12u 3', mRNA sequence
Length = 592
Score = 102 bits (217), Expect(2) = 2e-028
Identities = 37/77 (48%), Positives = 61/77 (79%)
Frame = +1 / -1
Query: 517 PEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSI 696
PEI DA V+ D+ AGEVP+A+++RS S ++E ++++F+AK+V +YKR+ RV F +S+
Sbjct: 520 PEILDAVVIPFPDDEAGEVPIAYVVRSPASSLTEVDVQKFIAKQVTYYKRLRRVTFVESV 341
Query: 697 PKNPSGKILRKDLRARL 747
PK+ +GKILR++L A++
Sbjct: 340 PKSAAGKILRRELIAQV 290
Score = 43.7 bits (89), Expect(2) = 2e-028
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1 / -3
Query: 448 KEIIKYKGFQVPPAELEALLITHP 519
KE+IK KGFQ+ PAE E LL++HP
Sbjct: 590 KELIKSKGFQIAPAEXEGLLLSHP 519
>gb|BM816676.1|BM816676 HB01C09_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01C09_T3.ab1 similar to Renilla-luciferin
2-monooxygenase,4-coumarate--CoA ligase, mRNA sequence
Length = 865
Score = 60.2 bits (125), Expect(4) = 4e-028
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +1 / +1
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAM 171
K RVG DL+S++ + SGAAP+G+D+ + P+A + QGYGMTE ++++
Sbjct: 259 KHGRVGKYDLSSLKFIGSGAAPLGRDVMEVVAKNFPDAEIVQGYGMTETCGIISL 423
Score = 59.7 bits (124), Expect(4) = 4e-028
Identities = 26/53 (49%), Positives = 35/53 (66%)
Frame = +1 / +1
Query: 211 GSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTI 369
GS GT+V E K++D +T L +Q GEICIR IM+GY N+ +AT+ TI
Sbjct: 457 GSTGTLVVGVEAKVIDVETQKHLPPSQLGEICIRRPHIMQGYFNNVKATEITI 615
Score = 36.8 bits (74), Expect(4) = 4e-028
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1 / +3
Query: 403 GYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEAL 504
GY D+ ++F+V LK+ + KGFQ+ A+LE L
Sbjct: 648 GYFDEKRQLFVVH*LKD*LSPKGFQIGLADLEGL 749
Score = 23.5 bits (45), Expect(4) = 4e-028
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +1 / +2
Query: 379 GWLHTGDI 402
GW+HTGD+
Sbjct: 623 GWVHTGDL 646
>gb|BI958356.1|BI958356 HVSMEn0014I24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014I24f, mRNA sequence
Length = 666
Score = 121 bits (258), Expect = 9e-027
Identities = 51/57 (89%), Positives = 54/57 (94%)
Frame = +1 / +2
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCL 177
KSP+V A DLA IRMVMSGAAPMGK+LQDAFMAKIPNAVLGQG+GMTEAGPVLAMCL
Sbjct: 470 KSPQVTAGDLACIRMVMSGAAPMGKELQDAFMAKIPNAVLGQGFGMTEAGPVLAMCL 640
Score = 103 bits (220), Expect = 2e-021
Identities = 47/57 (82%), Positives = 47/57 (82%)
Frame = -3 / -1
Query: 176 RHMASTGPASVIPYPWPSTALGILAMNASWRSFPMGAAPDMTMRMEARSAAPTRGLL 6
RHMASTGPASVIP P PSTALGILAM AS S PMGAAPDMTMRM ARS A T GLL
Sbjct: 639 RHMASTGPASVIPNPCPSTALGILAMKASCSSLPMGAAPDMTMRMHARSPAVTWGLL 469
>gb|AW983524.1|AW983524 HVSMEg0010P03f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0010P03f, mRNA sequence
Length = 856
Score = 61.1 bits (127), Expect(3) = 1e-025
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +1 / +3
Query: 337 LNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALL 507
L T+ +I GW+ DIGY+D+ ++FI R+KE+I KGFQV PAE A L
Sbjct: 528 LGTKRKTEPSIYSHGWVDNRDIGYIDEQGDVFIRHRIKELI*SKGFQVSPAEF*AFL 698
Score = 53.8 bits (111), Expect(3) = 1e-025
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +1 / +3
Query: 205 KSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYL 339
K S G ++ N E+K VDPDT SL +N PGE+C R + M G L
Sbjct: 393 KKNSVGFILPNLEVKFVDPDTGRSLSKNTPGELCRRSQCGMHGLL 527
Score = 40.0 bits (81), Expect(3) = 1e-025
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1 / +3
Query: 40 SIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTE 150
+++ VM+ AAP+ DL AF K P + + YG+TE
Sbjct: 225 ALKSVMTAAAPLAPDLLAAFQRKFPGVQVEEAYGLTE 335
>gb|BQ757736.1|BQ757736 EBem10_SQ005_B05_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ005_B05 5', mRNA sequence
Length = 338
Score = 107 bits (228), Expect = 1e-022
Identities = 44/69 (63%), Positives = 56/69 (81%)
Frame = +1 / +2
Query: 529 DAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNP 708
+AAVV D+ AGE+PVAF+++ GS++ E +IK FVAK+VV YKRI+RVF DSIPKN
Sbjct: 2 EAAVVGYADDQAGELPVAFVVQRSGSKVHEAQIKDFVAKQVVHYKRIHRVFLVDSIPKNA 181
Query: 709 SGKILRKDL 735
+GKILRKDL
Sbjct: 182 AGKILRKDL 208
>gb|CV059902.1|CV059902 BNEL52b8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL52b8 5' similar to Putative
AMP-binding protein, mRNA sequence
Length = 548
Score = 106 bits (226), Expect = 2e-022
Identities = 40/78 (51%), Positives = 56/78 (71%)
Frame = +1 / +1
Query: 502 LLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVF 681
LL+THPE+ D AV+ D G+ P+A+++R +GS +S E+ +FVAK+V YK++ +V
Sbjct: 1 LLLTHPEVSDVAVIPFPDREVGQFPMAYVVRKKGSNLSAQEVMEFVAKQVAPYKKVRKVA 180
Query: 682 FTDSIPKNPSGKILRKDL 735
F IPKN SGKILRKDL
Sbjct: 181 FVTDIPKNASGKILRKDL 234
>gb|CV061694.1|CV061694 BNEL70h10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL70h10 5' similar to Putative
AMP-binding protein, mRNA sequence
Length = 568
Score = 106 bits (226), Expect = 2e-022
Identities = 40/78 (51%), Positives = 56/78 (71%)
Frame = +1 / +1
Query: 502 LLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVF 681
LL+THPE+ D AV+ D G+ P+A+++R +GS +S E+ +FVAK+V YK++ +V
Sbjct: 1 LLLTHPEVSDVAVIPFPDREVGQFPMAYVVRKKGSNLSAQEVMEFVAKQVAPYKKVRKVA 180
Query: 682 FTDSIPKNPSGKILRKDL 735
F IPKN SGKILRKDL
Sbjct: 181 FVTDIPKNASGKILRKDL 234
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 461,473,794
Number of Sequences: 312970
Number of extensions: 6902254
Number of successful extensions: 56673
Number of sequences better than 1.0e-020: 50
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 12955138390
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)