TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437629.2.1
(1264 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ453298.1|BJ453298 BJ453298 K. Sato unpublished cDNA li... 423 e-117
gb|BI948762.1|BI948762 HVSMEl0010L20f Hordeum vulgare spike... 378 e-104
gb|CV064134.1|CV064134 BNEL98d5 Barley EST endosperm librar... 354 5e-097
gb|BI780615.2|BI780615 EBes01_SQ001_H19_R embryo sac, 4-6 D... 335 3e-091
gb|BI957363.1|BI957363 HVSMEn0009C19f Hordeum vulgare rachi... 313 4e-087
gb|CV054787.1|CV054787 BNEL113c8 Barley EST endosperm libra... 315 3e-085
gb|BJ460841.1|BJ460841 BJ460841 K. Sato unpublished cDNA li... 308 3e-083
gb|CV064122.1|CV064122 BNEL98c5 Barley EST endosperm librar... 281 1e-081
gb|BU997246.1|BU997246 HI07G08r HI Hordeum vulgare subsp. v... 301 5e-081
gb|BJ473611.1|BJ473611 BJ473611 K. Sato unpublished cDNA li... 297 1e-079
gb|BJ455168.1|BJ455168 BJ455168 K. Sato unpublished cDNA li... 296 2e-079
gb|CV061394.1|CV061394 BNEL68d1 Barley EST endosperm librar... 283 1e-075
gb|CA014678.1|CA014678 HT12A16r HT Hordeum vulgare subsp. v... 260 1e-068
gb|CB858531.1|CB858531 HI07G08w HI Hordeum vulgare subsp. v... 176 2e-043
emb|AJ234443.1|HVU234443 Hordeum vulgare partial mRNA; clon... 157 1e-037
gb|BJ447422.1|BJ447422 BJ447422 K. Sato unpublished cDNA li... 139 3e-034
>gb|BJ453298.1|BJ453298 BJ453298 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak42g23 5', mRNA sequence
Length = 633
Score = 423 bits (917), Expect = e-117
Identities = 169/177 (95%), Positives = 175/177 (98%)
Frame = -1 / +2
Query: 1219 KACCAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKIGIDIFGLGFL 1040
KACCAVLQSWVSRKFMTGCVVLFPVA TFFITWWF+QFVDGFFSPLYAKIG+DIFGLGFL
Sbjct: 101 KACCAVLQSWVSRKFMTGCVVLFPVAFTFFITWWFVQFVDGFFSPLYAKIGVDIFGLGFL 280
Query: 1039 TSLVFIFLVGIFVSSWVGSTIFWVGEWFIKKMPFVRHIYSASKQVSTAISPDQNTTAFKE 860
TSL FIFLVGIFVSSWVGST+FWVGEWFIKKMPFV+HIYSASKQVSTAISPDQNTTAFKE
Sbjct: 281 TSLAFIFLVGIFVSSWVGSTVFWVGEWFIKKMPFVKHIYSASKQVSTAISPDQNTTAFKE 460
Query: 859 VAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIR 689
VAIIRHPR+GEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFL+NSEEIIR
Sbjct: 461 VAIIRHPRVGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLLNSEEIIR 631
Score = 388 bits (842), Expect = e-107
Identities = 165/188 (87%), Positives = 175/188 (93%)
Frame = +3 / -1
Query: 687 GLMISSEFTRNMSPMYR*FVGTYTLHSSSSPLSV*RTTVDVMNPNAYSPIRG*RIIATSL 866
GLMISSEF+RN+SP+YR*FVGT TLH+SSSPLSV RTTVDV+NPNAYSP RG RIIATSL
Sbjct: 633 GLMISSEFSRNISPIYR*FVGT*TLHNSSSPLSVWRTTVDVINPNAYSPTRGCRIIATSL 454
Query: 867 KAVVF*SGEIAVLTCFDAEYICLTNGIFFINHSPTQKMVEPTHEETNIPTRNMNTREVKK 1046
AVVF*SGE+AVLTCFDAEY+C TNGIFFINHSPTQK VEPTHEETNIPTRNMN R+V+K
Sbjct: 453 NAVVF*SGEMAVLTCFDAEYMCFTNGIFFINHSPTQKTVEPTHEETNIPTRNMNARDVRK 274
Query: 1047 PRPNMSIPIFAYRGLKKPSTN*INHHVMKNVTATGKRTTHPVINFLETQL*RTAQHALRV 1226
PRPNMS PIFAY GLK PSTN* NHHVMKNV ATGKRTTHPVINFL+TQL*RTAQHALRV
Sbjct: 273 PRPNMSTPIFAYSGLKNPSTN*TNHHVMKNVKATGKRTTHPVINFLDTQL*RTAQHALRV 94
Query: 1227 EVVGELGR 1250
EVVGELGR
Sbjct: 93 EVVGELGR 70
Score = 319 bits (692), Expect = 1e-086
Identities = 130/178 (73%), Positives = 153/178 (85%)
Frame = +2 / -3
Query: 689 SYDLLRVHQKYVTDV*MICWHIHTTQFFIAFVSLKDHS*CYESKCIFTNSWMTNYCNFFE 868
S DL RV QKY+T++*MIC HI+TTQF I FV L+++S*CY+S+C+FTN+WM+NY N F+
Sbjct: 631 SDDLFRVQQKYITNI*MICRHINTTQFLITFVCLENNS*CYKSECVFTNTWMSNYRNLFK 452
Query: 869 SSRILIW*NCSADLL*C*IYMSYKWHFLYKPLAHPEDG*TNP*RNKYSNQKYEYQRSQKT 1048
RILIW*N SADLL*C IY+ YKWHFLYKP ++PED *T+P*RNKYSNQKYE QR QKT
Sbjct: 451 CCRILIW*NGSADLL*CRIYVLYKWHFLYKPFSNPEDS*THP*RNKYSNQKYECQRCQKT 272
Query: 1049 KTKYVDSNFCI*GTEKTINKLNKPPCDEERDCNRKKDYTSSHKLS*DPTLKNSTACLA 1222
KTKYVDS+FCI* EK+INKLN+PPCDEER+ NRKK++TSSHK S PTLKNS ACLA
Sbjct: 271 KTKYVDSDFCI*WAEKSINKLNEPPCDEERESNRKKNHTSSHKFSRYPTLKNSAACLA 98
Score = 278 bits (601), Expect(2) = 5e-081
Identities = 106/138 (76%), Positives = 116/138 (84%)
Frame = -3 / +1
Query: 1250 ATQLAHHLHTQGMLCCSSKLGLKKVYDWMCSPFSCCSHVLHHMVVYSIC*WFFQSPICKN 1071
A QLAHHLH QGML CSS+LG++K+YDWMC FSCC HVLHHMVV SIC*W FQ ICKN
Sbjct: 70 APQLAHHLHPQGMLRCSSELGIEKIYDWMCGSFSCCFHVLHHMVVRSIC*WIFQPTICKN 249
Query: 1070 WNRHIWSWFFDFSGIHISGWNICFFMGWFNHLLGGRVVYKENAICKTYIFSIKASQHCNF 891
+RHIWSWF D SGIHISGWNICFFMG FN LLG R+VYKENAICK +IF IKASQHC+F
Sbjct: 250 RSRHIWSWFSDISGIHISGWNICFFMGGFNCLLGWRMVYKENAICKAHIFGIKASQHCHF 429
Query: 890 TRSKYDCFQRSCNNSSST 837
TRSKYD R C+NS+ST
Sbjct: 430 TRSKYDSI*RGCDNSTST 483
Score = 260 bits (562), Expect = 1e-068
Identities = 128/176 (72%), Positives = 134/176 (76%)
Frame = +1 / -2
Query: 694 *SPQSSPEICHRCIDDLLAHTHYTVLHRLCQSEGPQLML*IQMHIHQFVDDELLQLL*KQ 873
*S QSS EI H+ IDDL AH HYT+ H LC S QLML*I+M IHQ VD EL Q L*
Sbjct: 626 *SLQSSAEIYHQYIDDLSAHKHYTIPHHLCLSGEQQLML*IRMRIHQHVDVELSQPL*ML 447
Query: 874 SYFDLVKLQC*LALMLNIYVLQMAFSL*TTRPPRRWLNQPMKKQIFQPEI*IPEKSKNQD 1053
SYFDLVK QC*LALM NI LQMAFSL*T PRR LN PMKKQIFQPEI*+PE S+NQD
Sbjct: 446 SYFDLVKWQC*LALMPNICALQMAFSL*TILQPRRQLNPPMKKQIFQPEI*MPEMSENQD 267
Query: 1054 QICRFQFLHIGD*KNHQQIE*TTM**RT*LQQEKGLHIQS*TFLRPNFEEQHSMPC 1221
QICR +FLHI *K HQQIE TTM**RT* QQEK HIQS* F PN EEQ SMPC
Sbjct: 266 QICRLRFLHIVG*KIHQQIERTTM**RT*KQQEKEPHIQS*IFSIPNSEEQRSMPC 99
Score = 232 bits (502), Expect = 2e-060
Identities = 106/146 (72%), Positives = 114/146 (78%)
Frame = -2 / +3
Query: 1125 HGGLFNLLMVFSVPYMQKLESTYLVLVF*LLWYSYFWLEYLFLHGLVQPSSGWASGL*RK 946
HGG FNLLM FS YMQK ESTYLVLVF* LW+SYFWLEYLFLHG VQ SSG +GL*RK
Sbjct: 195 HGGSFNLLMDFSAHYMQKSESTYLVLVF*HLWHSYFWLEYLFLHGWVQLSSGLENGL*RK 374
Query: 945 CHL*DIYIQHQSKSALQFHQIKIRLLSKKLQ*FVIHELVNMHLDS*HQLWSFRLTKAMKN 766
CHL* YI+HQSKSAL FHQIKIR K+L+*F IH LVN H D *HQL R TK M+N
Sbjct: 375 CHL*STYIRHQSKSALPFHQIKIRQHLKRLR*FDIHVLVNTHSDL*HQLLFSRQTKVMRN 554
Query: 765 CVVCMCQQIIYTSVTYFW*TLRRS*D 688
CVV MC+QIIY V YF *TL+RS D
Sbjct: 555 CVVFMCRQIIYILVIYFC*TLKRSSD 632
Score = 44.1 bits (90), Expect(2) = 5e-081
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = -3 / +1
Query: 788 D*QRR*RTV*CVCANKSSIHR*HISGEL*GDHKT 687
D QR * V*C+CA+KSSI+ *+IS EL* DH+T
Sbjct: 532 DRQR**GIV*CLCADKSSIYW*YISAEL*RDHQT 633
>gb|BI948762.1|BI948762 HVSMEl0010L20f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0010L20f, mRNA sequence
Length = 834
Score = 378 bits (820), Expect = e-104
Identities = 154/184 (83%), Positives = 171/184 (92%)
Frame = -1 / +2
Query: 1117 FIQFVDGFFSPLYAKIGIDIFGLGFLTSLVFIFLVGIFVSSWVGSTIFWVGEWFIKKMPF 938
FI+ DGFFSPLYAK+G D+FGLGF+TSLVFIF+VGIFVSSWVGST+FWVGEWFI+KMPF
Sbjct: 2 FIRSFDGFFSPLYAKLGFDVFGLGFVTSLVFIFIVGIFVSSWVGSTVFWVGEWFIEKMPF 181
Query: 937 VRHIYSASKQVSTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCS 758
VRHIYSASKQVSTA+SPDQNTTAFKEVAII HPR GEYAFGFITS+++LQTDKGDEELCS
Sbjct: 182 VRHIYSASKQVSTAVSPDQNTTAFKEVAIISHPRAGEYAFGFITSSMILQTDKGDEELCS 361
Query: 757 VYVPTNHLYIGDIFLVNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLEPMPRKSQNIR 578
VYVPTNHL IGDIFLVNS EIIRPNLSIREGIEIIVSGGMTMP+VI +L P P ++Q R
Sbjct: 362 VYVPTNHLCIGDIFLVNSAEIIRPNLSIREGIEIIVSGGMTMPEVITALGPAPDENQGAR 541
Query: 577 LNRM 566
L+R+
Sbjct: 542 LDRV 553
Score = 300 bits (649), Expect = 1e-080
Identities = 132/181 (72%), Positives = 148/181 (81%)
Frame = +3 / -1
Query: 576 RRMFWLFRGMGSSDAIT*GMVIPPDTIISIPSRMDKLGLMISSEFTRNMSPMYR*FVGTY 755
+R W G G IT GMVIPP+TIISIPSRMD+LGL+IS+EFT+ +SP++R* VGT
Sbjct: 543 KRAPWFSSGAGPRAVITSGMVIPPETIISIPSRMDRLGLIISAEFTKKISPIHR*LVGT* 364
Query: 756 TLHSSSSPLSV*RTTVDVMNPNAYSPIRG*RIIATSLKAVVF*SGEIAVLTCFDAEYICL 935
TLHSSSSPLSV*R +DV+NPNAYSP RG IIATSL AVVF*SGE AVLTCFDAEY+CL
Sbjct: 363 TLHSSSSPLSV*RIMLDVINPNAYSPARGWLIIATSLNAVVF*SGETAVLTCFDAEYMCL 184
Query: 936 TNGIFFINHSPTQKMVEPTHEETNIPTRNMNTREVKKPRPNMSIPIFAYRGLKKPSTN*I 1115
TNGIF INHSPTQK VEPTH++TNIPT NMNTR+V PRPN S P FA GLKKPS + I
Sbjct: 183 TNGIFSINHSPTQKTVEPTHDDTNIPTINMNTRDVTNPRPNTSNPSFA*SGLKKPSKDRI 4
Query: 1116 N 1118
N
Sbjct: 3 N 1
Score = 240 bits (519), Expect = 1e-062
Identities = 101/184 (54%), Positives = 124/184 (67%)
Frame = +2 / -3
Query: 566 HSI*TNVLAFPWHGLQ*CNHLRXXXXXXXXXXXXXXXXXIRSYDLLRVHQKYVTDV*MIC 745
HS+*T L W G C HLR + Y+L RVHQK +T+ *MI
Sbjct: 553 HSV*TGPLVLIWRGS*SCYHLRHGHSSRNNYLYPFSNGQVGPYNLCRVHQKDITNT*MIG 374
Query: 746 WHIHTTQFFIAFVSLKDHS*CYESKCIFTNSWMTNYCNFFESSRILIW*NCSADLL*C*I 925
WHI TTQFFI FVSLK+H+ CY+SKC+FT++ M NYC+FF+ ILIW*N SA+LL*C I
Sbjct: 373 WHIDTTQFFITFVSLKNHARCYKSKCVFTSTGMANYCHFFKCCCILIW*NSSANLL*CRI 194
Query: 926 YMSYKWHFLYKPLAHPEDG*TNP*RNKYSNQKYEYQRSQKTKTKYVDSNFCI*GTEKTIN 1105
Y+ YKWHFLYKP ++PED * +P* ++YSN KYEY+R K K KYV+S CI TEKT+
Sbjct: 193 YVPYKWHFLYKPFSNPEDS*AHP**HEYSNNKYEYKRCHKPKAKYVESKLCIEWTEKTVE 14
Query: 1106 KLNK 1117
NK
Sbjct: 13 GSNK 2
Score = 188 bits (406), Expect = 4e-047
Identities = 99/165 (60%), Positives = 106/165 (64%)
Frame = +1 / -2
Query: 622 SPEAWSXXXXXXXXXXXEWIN*VL*SPQSSPEICHRCIDDLLAHTHYTVLHRLCQSEGPQ 801
SP AWS EW L*S QSSP+ H+ IDD LAH HYTVLH LCQSE
Sbjct: 497 SPPAWSFLQKQLSLSLLEWTGWAL*SLQSSPKRYHQYIDDWLAHRHYTVLHHLCQSEESC 318
Query: 802 LML*IQMHIHQFVDDELLQLL*KQSYFDLVKLQC*LALMLNIYVLQMAFSL*TTRPPRRW 981
ML*IQM IHQ D LL LL* YFDLVK QC*LALM NI LQMAFSL*T PRR
Sbjct: 317 SML*IQMRIHQHGDG*LLPLL*MLLYFDLVKQQC*LALMQNICALQMAFSL*TILQPRRQ 138
Query: 982 LNQPMKKQIFQPEI*IPEKSKNQDQICRFQFLHIGD*KNHQQIE* 1116
L+ PM +IFQ I*I E S+ Q QI R Q LH D*KN ++IE*
Sbjct: 137 LSPPMMTRIFQQ*I*IQEMSQTQGQIRRIQALHRVD*KNRRRIE* 3
Score = 177 bits (382), Expect = 8e-044
Identities = 91/148 (61%), Positives = 97/148 (65%)
Frame = -2 / +3
Query: 1116 LFNLLMVFSVPYMQKLESTYLVLVF*LLWYSYFWLEYLFLHGLVQPSSGWASGL*RKCHL 937
LF+ VFSV MQ L+STYL L * L YSY LEY HG Q SSG +GL*RKCHL
Sbjct: 3 LFDPSTVFSVHSMQSLDSTYLALGL*HLLYSYLLLEYSCHHGWAQLSSGLENGL*RKCHL 182
Query: 936 *DIYIQHQSKSALQFHQIKIRLLSKKLQ*FVIHELVNMHLDS*HQLWSFRLTKAMKNCVV 757
* YI HQSK AL FHQIKI+ KK Q* I LVN HLD *H+ FRLTK MKNCVV
Sbjct: 183 *GTYILHQSKLALLFHQIKIQQHLKKWQ*LAIPVLVNTHLDL*HRA*FFRLTKVMKNCVV 362
Query: 756 CMCQQIIYTSVTYFW*TLRRS*DLIYPF 673
MCQ IIY V FW*TL+R * PF
Sbjct: 363 SMCQPIIYVLVISFW*TLQRL*GPTCPF 446
Score = 128 bits (275), Expect(2) = 1e-040
Identities = 56/90 (62%), Positives = 61/90 (67%)
Frame = -3 / +1
Query: 1118 VYSIC*WFFQSPICKNWNRHIWSWFFDFSGIHISGWNICFFMGWFNHLLGGRVVYKENAI 939
VYSI FFQS +CK W R IW W D S IHI WNI MG N LLG R+VY+ENAI
Sbjct: 1 VYSILRRFFQSTLCKAWIRRIWPWVCDISCIHIYCWNIRVIMGGLNCLLGWRMVYRENAI 180
Query: 938 CKTYIFSIKASQHCNFTRSKYDCFQRSCNN 849
CK +IF IKAS HC FTRSKY+ RS NN
Sbjct: 181 CKAHIFCIKAS*HCCFTRSKYNSI*RSGNN 270
Score = 58.3 bits (121), Expect(2) = 1e-040
Identities = 32/68 (47%), Positives = 42/68 (61%)
Frame = -3 / +1
Query: 791 SD*QRR*RTV*CVCANKSSIHR*HISGEL*GDHKT*FIHSXXXXXXXXXXNDHASGDCIT 612
SD*QR *RTV*C+CAN+SS++ *++ GEL D+K +HS NDHA GD +
Sbjct: 328 SD*QR**RTV*CLCANQSSMYW*YLFGELCRDYKAQPVHSRRDRDNCFWRNDHAGGDNSS 507
Query: 611 GAHATEKP 588
A +P
Sbjct: 508 RTRAR*EP 531
>gb|CV064134.1|CV064134 BNEL98d5 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL98d5 5' similar to unknown protein, mRNA
sequence
Length = 649
Score = 354 bits (768), Expect = 5e-097
Identities = 140/158 (88%), Positives = 152/158 (96%)
Frame = -1 / +2
Query: 1219 KACCAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKIGIDIFGLGFL 1040
KAC AVLQSWVSRKFMTGCVV+FP+AVTFFIT WFI+F DGFFSPLYAK+G D+FGLGF+
Sbjct: 176 KACFAVLQSWVSRKFMTGCVVIFPMAVTFFITLWFIRFFDGFFSPLYAKLGFDVFGLGFV 355
Query: 1039 TSLVFIFLVGIFVSSWVGSTIFWVGEWFIKKMPFVRHIYSASKQVSTAISPDQNTTAFKE 860
TSLVFIF+VGIFVSSWVGST+FWVGEWFIKKMPFVRHIYSASKQVSTA+SPDQNTTAFKE
Sbjct: 356 TSLVFIFIVGIFVSSWVGSTVFWVGEWFIKKMPFVRHIYSASKQVSTAVSPDQNTTAFKE 535
Query: 859 VAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVP 746
VAII HPR GEYAFGFITS+++LQTDKGDEELCSVYVP
Sbjct: 536 VAIISHPRAGEYAFGFITSSMILQTDKGDEELCSVYVP 649
Score = 311 bits (673), Expect = 6e-084
Identities = 136/168 (80%), Positives = 145/168 (86%)
Frame = +3 / -2
Query: 747 GTYTLHSSSSPLSV*RTTVDVMNPNAYSPIRG*RIIATSLKAVVF*SGEIAVLTCFDAEY 926
GT TLHSSSSPLSV*R +DV+NPNAYSP RG IIATSL AVVF*SGE AVLTCFDAEY
Sbjct: 648 GT*TLHSSSSPLSV*RIMLDVINPNAYSPARGWLIIATSLNAVVF*SGETAVLTCFDAEY 469
Query: 927 ICLTNGIFFINHSPTQKMVEPTHEETNIPTRNMNTREVKKPRPNMSIPIFAYRGLKKPST 1106
+CLTNGIFFINHSPTQK VEPTH++TNIPT NMNTR+V PRPN S P FA GLKKPS
Sbjct: 468 MCLTNGIFFINHSPTQKTVEPTHDDTNIPTINMNTRDVTNPRPNTSNPSFA*SGLKKPSK 289
Query: 1107 N*INHHVMKNVTATGKRTTHPVINFLETQL*RTAQHALRVEVVGELGR 1250
N INH VMKNVTA GK TTHPVINFL+TQL*RTA+HALRVEV GE+GR
Sbjct: 288 NRINHKVMKNVTAIGKITTHPVINFLDTQL*RTAKHALRVEVAGEVGR 145
Score = 245 bits (529), Expect = 4e-064
Identities = 99/159 (62%), Positives = 122/159 (76%)
Frame = +2 / -1
Query: 746 WHIHTTQFFIAFVSLKDHS*CYESKCIFTNSWMTNYCNFFESSRILIW*NCSADLL*C*I 925
WHI TTQFFI FVSLK+H+ CY+SKC+FT++ M NYC+FF+ ILIW*N SA+LL*C I
Sbjct: 649 WHIDTTQFFITFVSLKNHARCYKSKCVFTSTGMANYCHFFKCCCILIW*NSSANLL*CRI 470
Query: 926 YMSYKWHFLYKPLAHPEDG*TNP*RNKYSNQKYEYQRSQKTKTKYVDSNFCI*GTEKTIN 1105
Y+ YKWHFLYKP ++PED * +P* ++YSN KYEY+R K K KYV+S CI TEKT+
Sbjct: 469 YVPYKWHFLYKPFSNPEDS*AHP**HEYSNNKYEYKRCHKPKAKYVESKLCIEWTEKTVE 290
Query: 1106 KLNKPPCDEERDCNRKKDYTSSHKLS*DPTLKNSTACLA 1222
+ NKP DEE + + +YTSSHKLS* P LK+ ACLA
Sbjct: 289 ESNKPQSDEECHSHWENNYTSSHKLS*HPALKDGEACLA 173
Score = 193 bits (416), Expect(2) = 6e-051
Identities = 85/134 (63%), Positives = 91/134 (67%)
Frame = -3 / +1
Query: 1250 ATQLAHHLHTQGMLCCSSKLGLKKVYDWMCSPFSCCSHVLHHMVVYSIC*WFFQSPICKN 1071
A LA HLH QGML SKLG+KKVYDWMCS F +LHH VVYSI FFQS +CK
Sbjct: 145 APHLAGHLHPQGMLRRPSKLGVKKVYDWMCSYFPNGCDILHHFVVYSILRRFFQSTLCKA 324
Query: 1070 WNRHIWSWFFDFSGIHISGWNICFFMGWFNHLLGGRVVYKENAICKTYIFSIKASQHCNF 891
W R IW W D S IHI WNI MG N LLG R+VYKENAICK +IF IKAS HC F
Sbjct: 325 WIRRIWPWVCDISCIHIYCWNIRVIMGGLNCLLGWRMVYKENAICKAHIFCIKAS*HCCF 504
Query: 890 TRSKYDCFQRSCNN 849
TRSKY+ RS NN
Sbjct: 505 TRSKYNSI*RSGNN 546
Score = 193 bits (416), Expect = 2e-048
Identities = 102/158 (64%), Positives = 109/158 (68%)
Frame = +1 / -3
Query: 748 AHTHYTVLHRLCQSEGPQLML*IQMHIHQFVDDELLQLL*KQSYFDLVKLQC*LALMLNI 927
AH HYTVLH LCQSE ML*IQM IHQ D LL LL* YFDLVK QC*LALM NI
Sbjct: 647 AHRHYTVLHHLCQSEESCSML*IQMRIHQHGDG*LLPLL*MLLYFDLVKQQC*LALMQNI 468
Query: 928 YVLQMAFSL*TTRPPRRWLNQPMKKQIFQPEI*IPEKSKNQDQICRFQFLHIGD*KNHQQ 1107
LQMAFSL*T PRR L+ PM +IFQ I*I E S+ Q QI R Q LH D*KN ++
Sbjct: 467 CALQMAFSL*TILQPRRQLSPPMMTRIFQQ*I*IQEMSQTQGQIRRIQALHRVD*KNRRR 288
Query: 1108 IE*TTM**RT*LQQEKGLHIQS*TFLRPNFEEQHSMPC 1221
IE*TT **R K LHIQS*TFL P+FE + SMPC
Sbjct: 287 IE*TTK**RMSQPLGK*LHIQS*TFLTPSFEGRRSMPC 174
Score = 155 bits (333), Expect = 5e-037
Identities = 78/124 (62%), Positives = 83/124 (66%)
Frame = -2 / +3
Query: 1119 GLFNLLMVFSVPYMQKLESTYLVLVF*LLWYSYFWLEYLFLHGLVQPSSGWASGL*RKCH 940
GLF+ VFSV MQ L+STYL L * L YSY LEY HG Q SSG +GL*RKCH
Sbjct: 276 GLFDSSTVFSVHSMQSLDSTYLALGL*HLLYSYLLLEYSCHHGWAQLSSGLENGL*RKCH 455
Query: 939 L*DIYIQHQSKSALQFHQIKIRLLSKKLQ*FVIHELVNMHLDS*HQLWSFRLTKAMKNCV 760
L* YI HQSK AL FHQIKI+ KK Q* I LVN HLD *H+ FRLTK MKNCV
Sbjct: 456 L*GTYILHQSKLALLFHQIKIQQHLKKWQ*LAIPVLVNTHLDL*HRA*FFRLTKVMKNCV 635
Query: 759 VCMC 748
V MC
Sbjct: 636 VSMC 647
Score = 28.6 bits (56), Expect(2) = 6e-051
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -3 / +1
Query: 791 SD*QRR*RTV*CVCA 747
SD*QR *RTV*C+CA
Sbjct: 604 SD*QR**RTV*CLCA 648
>gb|BI780615.2|BI780615 EBes01_SQ001_H19_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ001_H19 5', mRNA sequence
Length = 527
Score = 335 bits (726), Expect = 3e-091
Identities = 127/175 (72%), Positives = 156/175 (89%)
Frame = -1 / +2
Query: 1153 FPVAVTFFITWWFIQFVDGFFSPLYAKIGIDIFGLGFLTSLVFIFLVGIFVSSWVGSTIF 974
+P+A+TF+ TWWFI FVDGFFSP+YA++GI+IFGLGF+TS+ FIF VG+F+SSWVG+++
Sbjct: 2 WPIAITFYFTWWFIHFVDGFFSPIYAQLGINIFGLGFITSVTFIFFVGVFMSSWVGASVL 181
Query: 973 WVGEWFIKKMPFVRHIYSASKQVSTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSTVV 794
+GEW IK+MP VRHIY+ASKQ+S AISPDQN AFKE IIRHPRIGEYAFGFITS+V
Sbjct: 182 GIGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFKEAVIIRHPRIGEYAFGFITSSVS 361
Query: 793 LQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGIEIIVSGGMTMP 629
LQ+ G E+L VYVPTNHLYIGDIF+VNS+++IRPNLS+REGIEI+VSGGM+MP
Sbjct: 362 LQSYSGQEDLYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMP 526
Score = 188 bits (404), Expect = 8e-047
Identities = 91/175 (52%), Positives = 114/175 (65%)
Frame = +3 / -3
Query: 630 GMVIPPDTIISIPSRMDKLGLMISSEFTRNMSPMYR*FVGTYTLHSSSSPLSV*RTTVDV 809
G+ IPP+T IS+PSR ++LGL+ S EFT +SP+ R VGTYT SS P + R T +V
Sbjct: 525 GIDIPPETTISMPSRTERLGLITSFEFTMKISPI*RWLVGTYTQ*RSS*PE*LWRETDEV 346
Query: 810 MNPNAYSPIRG*RIIATSLKAVVF*SGEIAVLTCFDAEYICLTNGIFFINHSPTQKMVEP 989
MNPNAYSPIRG R++ SL A +F*SG+IA L C DA I T+G+ + HSP + P
Sbjct: 345 MNPNAYSPIRGCRMMTASLNACLF*SGDIAALICLDAL*IWRTSGMRLMIHSPMPRTDAP 166
Query: 990 THEETNIPTRNMNTREVKKPRPNMSIPIFAYRGLKKPSTN*INHHVMKNVTATGK 1154
T ++ PT+NM EV KPRP M IP A G K PST *+NH V NV A G+
Sbjct: 165 TQDDMKTPTKNMKVTEVMKPRPKMLIPNCA*IGEKNPSTK*MNHQVK*NVIAMGQ 1
Score = 126 bits (269), Expect = 3e-028
Identities = 61/151 (40%), Positives = 91/151 (60%)
Frame = +2 / -2
Query: 683 IRSYDLLRVHQKYVTDV*MICWHIHTTQFFIAFVSLKDHS*CYESKCIFTNSWMTNYCNF 862
IR Y +L VH + +T++ M+ W IHT + + ++L+ * ESKCIF N+ M
Sbjct: 472 IRPYHIL*VHHEDITNIKMVGWDIHTVKVLLTRIALERD**GNESKCIFPNTRMPYDDCL 293
Query: 863 FESSRILIW*NCSADLL*C*IYMSYKWHFLYKPLAHPEDG*TNP*RNKYSNQKYEYQRSQ 1042
E +LIW* S +LL + M++KWH L P + ++ +NP ++ SN+KYE RS
Sbjct: 292 LECLFVLIW*YSSTNLLGRIVDMAHKWHALNDPFTNAKNRCSNPR*HEDSNEKYESNRSD 113
Query: 1043 KTKTKYVDSNFCI*GTEKTINKLNKPPCDEE 1135
+ KTK VDS CI E++INK+N+PP + E
Sbjct: 112 EAKTKNVDSQLCIDWREESINKMNEPPGEVE 20
>gb|BI957363.1|BI957363 HVSMEn0009C19f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0009C19f,
mRNA sequence
Length = 656
Score = 313 bits (677), Expect(2) = 4e-087
Identities = 124/139 (89%), Positives = 133/139 (95%)
Frame = -1 / +3
Query: 1219 KACCAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKIGIDIFGLGFL 1040
KAC AVLQSWVSRKFMTGCVV+FP+AVTFFIT WFI+F DGFFSPLYAK+G D+FGLGF+
Sbjct: 195 KACFAVLQSWVSRKFMTGCVVIFPMAVTFFITLWFIRFFDGFFSPLYAKLGFDVFGLGFV 374
Query: 1039 TSLVFIFLVGIFVSSWVGSTIFWVGEWFIKKMPFVRHIYSASKQVSTAISPDQNTTAFKE 860
TSLVFIF+VGIFVSSWVGST+FWVGEWFIKKMPFVRHIYSASKQVSTA+SPDQNTTAFKE
Sbjct: 375 TSLVFIFIVGIFVSSWVGSTVFWVGEWFIKKMPFVRHIYSASKQVSTAVSPDQNTTAFKE 554
Query: 859 VAIIRHPRIGEYAFGFITS 803
VAII HPR GEYAFGFITS
Sbjct: 555 VAIISHPRAGEYAFGFITS 611
Score = 281 bits (609), Expect(2) = 8e-078
Identities = 121/149 (81%), Positives = 129/149 (86%)
Frame = +3 / -2
Query: 804 DVMNPNAYSPIRG*RIIATSLKAVVF*SGEIAVLTCFDAEYICLTNGIFFINHSPTQKMV 983
DV+NPNAYSP RG IIATSL AVVF*SGE AVLTCFDAEY+CLTNGIFFINHSPTQK V
Sbjct: 610 DVINPNAYSPARGWLIIATSLNAVVF*SGETAVLTCFDAEYMCLTNGIFFINHSPTQKTV 431
Query: 984 EPTHEETNIPTRNMNTREVKKPRPNMSIPIFAYRGLKKPSTN*INHHVMKNVTATGKRTT 1163
EPTH++TNIPT NMNTR+V PRPN S P FA GLKKPS N INH VMKNVTA GK TT
Sbjct: 430 EPTHDDTNIPTINMNTRDVTNPRPNTSNPSFA*SGLKKPSKNRINHKVMKNVTAIGKITT 251
Query: 1164 HPVINFLETQL*RTAQHALRVEVVGELGR 1250
HPVINFL+TQL*RTA+HALRVEV GE+GR
Sbjct: 250 HPVINFLDTQL*RTAKHALRVEVAGEVGR 164
Score = 205 bits (442), Expect(2) = 8e-054
Identities = 83/139 (59%), Positives = 105/139 (75%)
Frame = +2 / -1
Query: 806 CYESKCIFTNSWMTNYCNFFESSRILIW*NCSADLL*C*IYMSYKWHFLYKPLAHPEDG* 985
CY+SKC+FT++ M NYC+FF+ ILIW*N SA+LL*C IY+ YKWHFLYKP ++PED *
Sbjct: 608 CYKSKCVFTSTGMANYCHFFKCCCILIW*NSSANLL*CRIYVPYKWHFLYKPFSNPEDS* 429
Query: 986 TNP*RNKYSNQKYEYQRSQKTKTKYVDSNFCI*GTEKTINKLNKPPCDEERDCNRKKDYT 1165
+P* ++YSN KYEY+R K K KYV+S CI TEKT+ + NKP DEE + + ++T
Sbjct: 428 AHP**HEYSNNKYEYKRCHKPKAKYVESKLCIEWTEKTVEESNKPQSDEECHSHWENNHT 249
Query: 1166 SSHKLS*DPTLKNSTACLA 1222
SSHKLS* P LK+ ACLA
Sbjct: 248 SSHKLS*HPALKDGEACLA 192
Score = 191 bits (412), Expect(2) = 4e-050
Identities = 84/134 (62%), Positives = 90/134 (67%)
Frame = -3 / +2
Query: 1250 ATQLAHHLHTQGMLCCSSKLGLKKVYDWMCSPFSCCSHVLHHMVVYSIC*WFFQSPICKN 1071
A LA HLH QGML SKLG+KKVYDWMC F +LHH VVYSI FFQS +CK
Sbjct: 164 APHLAGHLHPQGMLRRPSKLGVKKVYDWMCGYFPNGCDILHHFVVYSILRRFFQSTLCKA 343
Query: 1070 WNRHIWSWFFDFSGIHISGWNICFFMGWFNHLLGGRVVYKENAICKTYIFSIKASQHCNF 891
W R IW W D S IHI WNI MG N LLG R+VYKENAICK +IF IKAS HC F
Sbjct: 344 WIRRIWPWVCDISCIHIYCWNIRVIMGGLNCLLGWRMVYKENAICKAHIFCIKAS*HCCF 523
Query: 890 TRSKYDCFQRSCNN 849
TRSKY+ RS NN
Sbjct: 524 TRSKYNSI*RSGNN 565
Score = 160 bits (343), Expect(2) = 3e-039
Identities = 88/139 (63%), Positives = 95/139 (68%)
Frame = +1 / -3
Query: 805 ML*IQMHIHQFVDDELLQLL*KQSYFDLVKLQC*LALMLNIYVLQMAFSL*TTRPPRRWL 984
ML*IQM IHQ D LL LL* YFDLVK QC*LALM NI LQMAFSL*T PRR L
Sbjct: 609 ML*IQMRIHQHGDG*LLPLL*MLLYFDLVKQQC*LALMQNICALQMAFSL*TILQPRRQL 430
Query: 985 NQPMKKQIFQPEI*IPEKSKNQDQICRFQFLHIGD*KNHQQIE*TTM**RT*LQQEKGLH 1164
+ PM +IFQ I*I E S+ Q QI R Q LH D*KN ++IE*TT **R K H
Sbjct: 429 SPPMMTRIFQQ*I*IQEMSQTQGQIRRIQALHRVD*KNRRRIE*TTK**RMSQPLGK*PH 250
Query: 1165 IQS*TFLRPNFEEQHSMPC 1221
IQS*TFL P+FE + SMPC
Sbjct: 249 IQS*TFLTPSFEGRRSMPC 193
Score = 126 bits (269), Expect = 3e-028
Identities = 65/106 (61%), Positives = 70/106 (66%)
Frame = -2 / +1
Query: 1119 GLFNLLMVFSVPYMQKLESTYLVLVF*LLWYSYFWLEYLFLHGLVQPSSGWASGL*RKCH 940
GLF+ VFSV MQ L+STYL L * L YSY LEY HG Q SSG +GL*RKCH
Sbjct: 295 GLFDSSTVFSVHSMQSLDSTYLALGL*HLLYSYLLLEYSCHHGWAQLSSGLENGL*RKCH 474
Query: 939 L*DIYIQHQSKSALQFHQIKIRLLSKKLQ*FVIHELVNMHLDS*HQ 802
L* YI HQSK AL FHQIKI+ KK Q* I LVN HLD *H+
Sbjct: 475 L*GTYILHQSKLALLFHQIKIQQHLKKWQ*LAIPVLVNTHLDL*HR 612
Score = 29.9 bits (59), Expect(2) = 4e-087
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = -1 / +1
Query: 802 TVVLQTDKGDEELC 761
+++LQTDK DEELC
Sbjct: 613 SMILQTDKSDEELC 654
Score = 29.9 bits (59), Expect(2) = 8e-078
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2 / -3
Query: 761 TQFFIAFVSLKDHS 802
TQFFI FVSLK+H+
Sbjct: 654 TQFFITFVSLKNHA 613
Score = 27.6 bits (54), Expect(2) = 4e-050
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / +2
Query: 792 FRLTKAMKNCV 760
FRLTK MKNCV
Sbjct: 623 FRLTKVMKNCV 655
Score = 26.3 bits (51), Expect(2) = 8e-054
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / -2
Query: 760 YTVLHRLCQSE 792
YTVLH CQSE
Sbjct: 655 YTVLHHFCQSE 623
Score = 22.6 bits (43), Expect(2) = 3e-039
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3 / -1
Query: 759 LHSSSSPLSV*R 794
LHSSSS LSV*R
Sbjct: 656 LHSSSSLLSV*R 621
>gb|CV054787.1|CV054787 BNEL113c8 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL113c8 5' similar to P0677H08.7, mRNA
sequence
Length = 588
Score = 315 bits (682), Expect = 3e-085
Identities = 124/131 (94%), Positives = 129/131 (98%)
Frame = -1 / +3
Query: 1219 KACCAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKIGIDIFGLGFL 1040
KACCAVLQSWVSRKFMTGCVVLFPVA TFFITWWF+QFVDGFFSPLYAKIG+DIFGLGFL
Sbjct: 195 KACCAVLQSWVSRKFMTGCVVLFPVAFTFFITWWFVQFVDGFFSPLYAKIGVDIFGLGFL 374
Query: 1039 TSLVFIFLVGIFVSSWVGSTIFWVGEWFIKKMPFVRHIYSASKQVSTAISPDQNTTAFKE 860
TSL FIFLVGIFVSSWVGST+FWVGEWFIKKMPFV+HIYSASKQVSTAISPDQNTTAFKE
Sbjct: 375 TSLAFIFLVGIFVSSWVGSTVFWVGEWFIKKMPFVKHIYSASKQVSTAISPDQNTTAFKE 554
Query: 859 VAIIRHPRIGE 827
VAIIRHPR+GE
Sbjct: 555 VAIIRHPRVGE 587
Score = 297 bits (644), Expect = 6e-080
Identities = 125/141 (88%), Positives = 130/141 (92%)
Frame = +3 / -3
Query: 828 SPIRG*RIIATSLKAVVF*SGEIAVLTCFDAEYICLTNGIFFINHSPTQKMVEPTHEETN 1007
SP RG RIIATSL AVVF*SGE+AVLTCFDAEY+C TNGIFFINHSPTQK VEPTHEETN
Sbjct: 586 SPTRGCRIIATSLNAVVF*SGEMAVLTCFDAEYMCFTNGIFFINHSPTQKTVEPTHEETN 407
Query: 1008 IPTRNMNTREVKKPRPNMSIPIFAYRGLKKPSTN*INHHVMKNVTATGKRTTHPVINFLE 1187
IPTRNMN R+V+KPRPNMS PIFAY GLK PSTN* NHHVMKNV ATGKRTTHPVINFL+
Sbjct: 406 IPTRNMNARDVRKPRPNMSTPIFAYSGLKNPSTN*TNHHVMKNVKATGKRTTHPVINFLD 227
Query: 1188 TQL*RTAQHALRVEVVGELGR 1250
TQL*RTAQHALRVEVVGELGR
Sbjct: 226 TQL*RTAQHALRVEVVGELGR 164
Score = 278 bits (601), Expect = 5e-074
Identities = 106/138 (76%), Positives = 116/138 (84%)
Frame = -3 / +2
Query: 1250 ATQLAHHLHTQGMLCCSSKLGLKKVYDWMCSPFSCCSHVLHHMVVYSIC*WFFQSPICKN 1071
A QLAHHLH QGML CSS+LG++K+YDWMC FSCC HVLHHMVV SIC*W FQ ICKN
Sbjct: 164 APQLAHHLHPQGMLRCSSELGIEKIYDWMCGSFSCCFHVLHHMVVRSIC*WIFQPTICKN 343
Query: 1070 WNRHIWSWFFDFSGIHISGWNICFFMGWFNHLLGGRVVYKENAICKTYIFSIKASQHCNF 891
+RHIWSWF D SGIHISGWNICFFMG FN LLG R+VYKENAICK +IF IKASQHC+F
Sbjct: 344 RSRHIWSWFSDISGIHISGWNICFFMGGFNCLLGWRMVYKENAICKAHIFGIKASQHCHF 523
Query: 890 TRSKYDCFQRSCNNSSST 837
TRSKYD R C+NS+ST
Sbjct: 524 TRSKYDSI*RGCDNSTST 577
Score = 247 bits (534), Expect = 9e-065
Identities = 101/132 (76%), Positives = 114/132 (86%)
Frame = +2 / -2
Query: 827 FTNSWMTNYCNFFESSRILIW*NCSADLL*C*IYMSYKWHFLYKPLAHPEDG*TNP*RNK 1006
FTN+WM+NY N F+ RILIW*N SADLL*C IY+ YKWHFLYKP ++PED *T+P*RNK
Sbjct: 587 FTNTWMSNYRNLFKCCRILIW*NGSADLL*CRIYVLYKWHFLYKPFSNPEDS*THP*RNK 408
Query: 1007 YSNQKYEYQRSQKTKTKYVDSNFCI*GTEKTINKLNKPPCDEERDCNRKKDYTSSHKLS* 1186
YSNQKYE QR QKTKTKYVDS+FCI* EK+INKLN+PPCDEER+ NRKK++TSSHK S
Sbjct: 407 YSNQKYECQRCQKTKTKYVDSDFCI*WAEKSINKLNEPPCDEERESNRKKNHTSSHKFSR 228
Query: 1187 DPTLKNSTACLA 1222
PTLKNS ACLA
Sbjct: 227 YPTLKNSAACLA 192
Score = 203 bits (438), Expect = 2e-051
Identities = 100/132 (75%), Positives = 103/132 (78%)
Frame = +1 / -1
Query: 826 IHQFVDDELLQLL*KQSYFDLVKLQC*LALMLNIYVLQMAFSL*TTRPPRRWLNQPMKKQ 1005
IHQ VD EL Q L* SYFDLVK QC*LALM NI LQMAFSL*T PRR LN PMKKQ
Sbjct: 588 IHQHVDVELSQPL*MLSYFDLVKWQC*LALMPNICALQMAFSL*TILQPRRQLNPPMKKQ 409
Query: 1006 IFQPEI*IPEKSKNQDQICRFQFLHIGD*KNHQQIE*TTM**RT*LQQEKGLHIQS*TFL 1185
IFQPEI*+PE S+NQDQICR +FLHI *K HQQIE TTM**RT* QQEK HIQS* F
Sbjct: 408 IFQPEI*MPEMSENQDQICRLRFLHIVG*KIHQQIERTTM**RT*KQQEKEPHIQS*IFS 229
Query: 1186 RPNFEEQHSMPC 1221
PN EEQ SMPC
Sbjct: 228 IPNSEEQRSMPC 193
Score = 172 bits (371), Expect = 3e-042
Identities = 77/100 (77%), Positives = 82/100 (82%)
Frame = -2 / +1
Query: 1125 HGGLFNLLMVFSVPYMQKLESTYLVLVF*LLWYSYFWLEYLFLHGLVQPSSGWASGL*RK 946
HGG FNLLM FS YMQK ESTYLVLVF* LW+SYFWLEYLFLHG VQ SSG +GL*RK
Sbjct: 289 HGGSFNLLMDFSAHYMQKSESTYLVLVF*HLWHSYFWLEYLFLHGWVQLSSGLENGL*RK 468
Query: 945 CHL*DIYIQHQSKSALQFHQIKIRLLSKKLQ*FVIHELVN 826
CHL* YI+HQSKSAL FHQIKIR K+L+*F IH LVN
Sbjct: 469 CHL*STYIRHQSKSALPFHQIKIRQHLKRLR*FDIHVLVN 588
>gb|BJ460841.1|BJ460841 BJ460841 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42g23 3', mRNA sequence
Length = 644
Score = 308 bits (667), Expect(2) = 3e-083
Identities = 128/135 (94%), Positives = 135/135 (100%)
Frame = -1 / -1
Query: 970 VGEWFIKKMPFVRHIYSASKQVSTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSTVVL 791
VGEWFIKKMPFV+HIYSASKQVSTAISPDQNTTAFKEVAIIRHPR+GEYAFGFITSTVVL
Sbjct: 644 VGEWFIKKMPFVKHIYSASKQVSTAISPDQNTTAFKEVAIIRHPRVGEYAFGFITSTVVL 465
Query: 790 QTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASL 611
QTDKGDEELCSVYVPTNHLYIGDIFL+NSEEIIRPNLSIREGIEIIVSGGMTMPQVIASL
Sbjct: 464 QTDKGDEELCSVYVPTNHLYIGDIFLLNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASL 285
Query: 610 EPMPRKSQNIRLNRM 566
+P+PRKSQ+IRLNR+
Sbjct: 284 DPIPRKSQSIRLNRI 240
Score = 265 bits (574), Expect(2) = 1e-070
Identities = 114/132 (86%), Positives = 122/132 (92%)
Frame = +3 / +1
Query: 573 FRRMFWLFRGMGSSDAIT*GMVIPPDTIISIPSRMDKLGLMISSEFTRNMSPMYR*FVGT 752
FRRM WLF GMGSSDAIT GMVIPP+TIISIPSRMDK GLMISSEF+RN+SP+YR*FVGT
Sbjct: 247 FRRMLWLFLGMGSSDAITCGMVIPPETIISIPSRMDKFGLMISSEFSRNISPIYR*FVGT 426
Query: 753 YTLHSSSSPLSV*RTTVDVMNPNAYSPIRG*RIIATSLKAVVF*SGEIAVLTCFDAEYIC 932
TLH+SSSPLSV RTTVDV+NPNAYSP RG RIIATSL AVVF*SGE+AVLTCFDAEY+C
Sbjct: 427 *TLHNSSSPLSVWRTTVDVINPNAYSPTRGCRIIATSLNAVVF*SGEMAVLTCFDAEYMC 606
Query: 933 LTNGIFFINHSP 968
TNGIFFINHSP
Sbjct: 607 FTNGIFFINHSP 642
Score = 161 bits (346), Expect(2) = 2e-041
Identities = 63/94 (67%), Positives = 79/94 (84%)
Frame = +2 / +3
Query: 689 SYDLLRVHQKYVTDV*MICWHIHTTQFFIAFVSLKDHS*CYESKCIFTNSWMTNYCNFFE 868
S DL RV QKY+T++*MIC HI+TTQF I FV L+++S*CY+S+C+FTN+WM+NY N F+
Sbjct: 363 SDDLFRVQQKYITNI*MICRHINTTQFLITFVCLENNS*CYKSECVFTNTWMSNYRNLFK 542
Query: 869 SSRILIW*NCSADLL*C*IYMSYKWHFLYKPLAH 970
RILIW*N SADLL*C IY+ YKWHFLYKP ++
Sbjct: 543 CCRILIW*NGSADLL*CRIYVLYKWHFLYKPFSN 644
Score = 161 bits (346), Expect = 8e-039
Identities = 81/131 (61%), Positives = 86/131 (65%)
Frame = +1 / +2
Query: 568 FYLDECSGFSVAWAPVMQSPEAWSXXXXXXXXXXXEWIN*VL*SPQSSPEICHRCIDDLL 747
FYL CSG S+ W MQ P AWS EWI+ V *S QSS EI H+ IDDL
Sbjct: 242 FYLGGCSGSSLGWGLAMQLPVAWSFLQKR*FQFLLEWISLV**SLQSSAEIYHQYIDDLS 421
Query: 748 AHTHYTVLHRLCQSEGPQLML*IQMHIHQFVDDELLQLL*KQSYFDLVKLQC*LALMLNI 927
AH HYT+ H LC S QLML*I+M IHQ VD EL Q L* SYFDLVK QC*LALM NI
Sbjct: 422 AHKHYTIPHHLCLSGEQQLML*IRMRIHQHVDVELSQPL*MLSYFDLVKWQC*LALMPNI 601
Query: 928 YVLQMAFSL*T 960
LQMAFSL*T
Sbjct: 602 CALQMAFSL*T 634
Score = 143 bits (306), Expect(2) = 1e-034
Identities = 66/97 (68%), Positives = 73/97 (75%)
Frame = -2 / -2
Query: 963 SGL*RKCHL*DIYIQHQSKSALQFHQIKIRLLSKKLQ*FVIHELVNMHLDS*HQLWSFRL 784
+GL*RKCHL* YI+HQSKSAL FHQIKIR K+L+*F IH LVN H D *HQL R
Sbjct: 637 NGL*RKCHL*STYIRHQSKSALPFHQIKIRQHLKRLR*FDIHVLVNTHSDL*HQLLFSRQ 458
Query: 783 TKAMKNCVVCMCQQIIYTSVTYFW*TLRRS*DLIYPF 673
TK M+NCVV MC+QIIY V YF *TL+RS D YPF
Sbjct: 457 TKVMRNCVVFMCRQIIYILVIYFC*TLKRSSDQTYPF 347
Score = 83.1 bits (175), Expect(2) = 3e-033
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = -3 / -3
Query: 965 RVVYKENAICKTYIFSIKASQHCNFTRSKYDCFQRSCNNSSST 837
R+VYKENAICK +IF IKASQHC+FTRSKYD R C+NS+ST
Sbjct: 639 RMVYKENAICKAHIFGIKASQHCHFTRSKYDSI*RGCDNSTST 511
Score = 79.9 bits (168), Expect(2) = 3e-033
Identities = 41/77 (53%), Positives = 50/77 (64%)
Frame = -3 / -3
Query: 788 D*QRR*RTV*CVCANKSSIHR*HISGEL*GDHKT*FIHSXXXXXXXXXXNDHASGDCITG 609
D QR * V*C+CA+KSSI+ *+IS EL* DH+T IHS NDHA+G+CI
Sbjct: 462 DRQR**GIV*CLCADKSSIYW*YISAEL*RDHQTKLIHSRRN*NYRFWRNDHATGNCIAR 283
Query: 608 AHATEKPEHSSK*NDVM 558
H E+PEH K*N+ M
Sbjct: 282 PHPKEEPEHPPK*NNDM 232
Score = 29.0 bits (57), Expect(2) = 2e-041
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 566 HSI*TNVLAFPWHGLQ*CNHL 628
+SI* + LA PW G+ CN+L
Sbjct: 240 YSI*ADALALPWDGV*RCNYL 302
Score = 24.9 bits (48), Expect(2) = 1e-070
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +1 / +1
Query: 379 IPGHQHDASLQ 411
IPGH++DAS+Q
Sbjct: 106 IPGHRYDASVQ 138
Score = 24.4 bits (47), Expect(2) = 3e-083
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2 / -3
Query: 411 LQGSIVLMPWDNLL 370
L GSIV MPW+ ++
Sbjct: 138 LDGSIVSMPWNTVI 97
Score = 24.4 bits (47), Expect(2) = 1e-034
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2 / -2
Query: 627 R*LHHWSPCHGKARTFV*IE* 565
R*LH +P G+AR *IE*
Sbjct: 301 R*LHR*TPSQGRARASA*IE* 239
>gb|CV064122.1|CV064122 BNEL98c5 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL98c5 5' similar to Oryza sativa, mRNA
sequence
Length = 648
Score = 281 bits (609), Expect(2) = 1e-081
Identities = 113/135 (83%), Positives = 122/135 (90%)
Frame = -1 / +2
Query: 1219 KACCAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKIGIDIFGLGFL 1040
KAC AVLQSWV RKFMTGCVV+FP+AVTFFIT WFI+F DGFFSPLYAK+G D+FGLG+
Sbjct: 176 KACFAVLQSWVPRKFMTGCVVIFPMAVTFFITLWFIRFFDGFFSPLYAKLGFDVFGLGYG 355
Query: 1039 TSLVFIFLVGIFVSSWVGSTIFWVGEWFIKKMPFVRHIYSASKQVSTAISPDQNTTAFKE 860
TSLVFI + GIF SSWVGST FWVGEWFIKKMPFVRHIYSASKQVST +SPDQNTTA+KE
Sbjct: 356 TSLVFILIRGIFESSWVGSTDFWVGEWFIKKMPFVRHIYSASKQVSTDVSPDQNTTAYKE 535
Query: 859 VAIIRHPRIGEYAFG 815
VAIIRH R GEYAFG
Sbjct: 536 VAIIRHTRAGEYAFG 580
Score = 256 bits (554), Expect(2) = 2e-071
Identities = 113/146 (77%), Positives = 122/146 (83%)
Frame = +3 / -1
Query: 813 NPNAYSPIRG*RIIATSLKAVVF*SGEIAVLTCFDAEYICLTNGIFFINHSPTQKMVEPT 992
NPNAYSP R I+ATSL AVVF*SGE +VLTCFDAEY+CLTNGIFFINHSPTQK VEPT
Sbjct: 582 NPNAYSPARVCLIMATSLYAVVF*SGETSVLTCFDAEYMCLTNGIFFINHSPTQKSVEPT 403
Query: 993 HEETNIPTRNMNTREVKKPRPNMSIPIFAYRGLKKPSTN*INHHVMKNVTATGKRTTHPV 1172
H+++NIP NMNTR+V PRPN S P FA GLKKPS N INH VMKNVTA GK TTHPV
Sbjct: 402 HDDSNIPLINMNTRDVPYPRPNTSNPSFA*SGLKKPSKNRINHKVMKNVTAIGKITTHPV 223
Query: 1173 INFLETQL*RTAQHALRVEVVGELGR 1250
INFL TQL*RTA+HALRVEV E+GR
Sbjct: 222 INFLGTQL*RTAKHALRVEVPVEVGR 145
Score = 173 bits (372), Expect(2) = 3e-046
Identities = 75/136 (55%), Positives = 95/136 (69%)
Frame = +2 / -3
Query: 815 SKCIFTNSWMTNYCNFFESSRILIW*NCSADLL*C*IYMSYKWHFLYKPLAHPEDG*TNP 994
SKC+FT++ M NY +FF ILIW*N SA+LL*C IY+ YKWHFLYKP ++PE * +P
Sbjct: 580 SKCVFTSTGMPNYGHFFIRCCILIW*NISANLL*CRIYVPYKWHFLYKPFSNPEVS*AHP 401
Query: 995 *RNKYSNQKYEYQRSQKTKTKYVDSNFCI*GTEKTINKLNKPPCDEERDCNRKKDYTSSH 1174
* +YS +YEY+R + KYV+S CI TEKT+ + NKP DEE + + +YTSSH
Sbjct: 400 **LEYSPNQYEYERCPVPQAKYVESKLCIEWTEKTVEESNKPQSDEECHSHWENNYTSSH 221
Query: 1175 KLS*DPTLKNSTACLA 1222
KLS P LK+ ACLA
Sbjct: 220 KLSWHPALKDGEACLA 173
Score = 169 bits (363), Expect(2) = 7e-043
Identities = 80/134 (59%), Positives = 86/134 (64%)
Frame = -3 / +1
Query: 1250 ATQLAHHLHTQGMLCCSSKLGLKKVYDWMCSPFSCCSHVLHHMVVYSIC*WFFQSPICKN 1071
A L HLH QGML SKLG KKVYDWMCS F +LHH VVYSI FFQS +CK
Sbjct: 145 APHLDGHLHPQGMLRRPSKLGAKKVYDWMCSYFPNGCDILHHFVVYSILRRFFQSTLCKA 324
Query: 1070 WNRHIWSWFFDFSGIHISGWNICFFMGWFNHLLGGRVVYKENAICKTYIFSIKASQHCNF 891
W R IW D S IHI NI MG N LLG R+VYKENAICK +IF IKAS H F
Sbjct: 325 WIRRIWPGVRDISRIHID*GNIRVIMGGLN*LLGWRMVYKENAICKAHIFCIKAS*H*CF 504
Query: 890 TRSKYDCFQRSCNN 849
TRSKY+ RS +N
Sbjct: 505 TRSKYNSV*RSGHN 546
Score = 140 bits (301), Expect(2) = 2e-035
Identities = 80/136 (58%), Positives = 87/136 (63%)
Frame = +1 / -2
Query: 814 IQMHIHQFVDDELLQLL*KQSYFDLVKLQC*LALMLNIYVLQMAFSL*TTRPPRRWLNQP 993
IQM IHQ L LL YFDLVK QC*LALM NI LQMAFSL*T PR L+ P
Sbjct: 581 IQMRIHQHGYA*LWPLLYTLLYFDLVKHQC*LALMQNICALQMAFSL*TILQPRSQLSPP 402
Query: 994 MKKQIFQPEI*IPEKSKNQDQICRFQFLHIGD*KNHQQIE*TTM**RT*LQQEKGLHIQS 1173
M +IF I*I E S+ QI R Q LH D*KN ++IE*TT **R K LHIQS
Sbjct: 401 MMTRIFP*SI*IREMSRTPGQIRRIQALHRVD*KNRRRIE*TTK**RMSQPLGK*LHIQS 222
Query: 1174 *TFLRPNFEEQHSMPC 1221
*TFL P+FE + SMPC
Sbjct: 221 *TFLAPSFEGRRSMPC 174
Score = 106 bits (226), Expect = 3e-022
Identities = 58/102 (56%), Positives = 63/102 (61%)
Frame = -2 / +3
Query: 1119 GLFNLLMVFSVPYMQKLESTYLVLVF*LLWYSYFWLEYLFLHGLVQPSSGWASGL*RKCH 940
GLF+ VFSV MQ L+STYL L YSY EY HG Q +SG +GL*RKCH
Sbjct: 276 GLFDSSTVFSVHSMQSLDSTYLAWGTGHLSYSY*LGEYSSHHGWAQLTSGLENGL*RKCH 455
Query: 939 L*DIYIQHQSKSALQFHQIKIRLLSKKLQ*FVIHELVNMHLD 814
L* YI HQSK AL FHQIKI+ KK * I LVN HLD
Sbjct: 456 L*GTYILHQSKLALMFHQIKIQQRIKKWP*LGIPVLVNTHLD 581
Score = 42.8 bits (87), Expect(2) = 1e-081
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = -1 / +1
Query: 811 ITSTVVLQTDKGDEELCSVYVP 746
+TS+++L TDKGDE+LCSVY P
Sbjct: 583 MTSSMILHTDKGDEQLCSVYEP 648
Score = 34.1 bits (68), Expect(2) = 2e-071
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2 / -1
Query: 746 WHIHTTQFFIAFVSLKDHS*CY 811
W I TQ FI FVS+K+H+ C+
Sbjct: 648 WLIDATQLFITFVSVKNHARCH 583
Score = 33.1 bits (66), Expect(2) = 3e-046
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3 / -2
Query: 747 GTYTLHSSSSPLSV*RTTVDVM 812
G+ TLHS SSPLSV*R +DV+
Sbjct: 647 GS*TLHSCSSPLSV*RIMLDVI 582
Score = 29.5 bits (58), Expect(2) = 2e-035
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / -3
Query: 748 AHTHYTVLHRLCQSE 792
AH YTV+H LCQ E
Sbjct: 646 AHRRYTVVHHLCQCE 602
Score = 25.8 bits (50), Expect(2) = 7e-043
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2 / +2
Query: 810 *HQLWSFRLTKAMKNCVVCM 751
*H+ F LTK M NCV M
Sbjct: 584 *HRA*FFTLTKVMNNCVASM 643
>gb|BU997246.1|BU997246 HI07G08r HI Hordeum vulgare subsp. vulgare cDNA clone HI07G08
5-PRIME, mRNA sequence
Length = 640
Score = 301 bits (652), Expect = 5e-081
Identities = 119/134 (88%), Positives = 128/134 (95%)
Frame = -1 / +2
Query: 1219 KACCAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKIGIDIFGLGFL 1040
KAC AVLQSWVSRKFMTGCVV+FP+AVTFFIT WFI+F DGFFSPLYAK+G D+FGLGF+
Sbjct: 239 KACFAVLQSWVSRKFMTGCVVIFPMAVTFFITLWFIRFFDGFFSPLYAKLGFDVFGLGFV 418
Query: 1039 TSLVFIFLVGIFVSSWVGSTIFWVGEWFIKKMPFVRHIYSASKQVSTAISPDQNTTAFKE 860
TSLVFIF+VGIFVSSWVGST+FWVGEWFIKKMPFVRHIYSASKQVSTA+SPDQNTTAFKE
Sbjct: 419 TSLVFIFIVGIFVSSWVGSTVFWVGEWFIKKMPFVRHIYSASKQVSTAVSPDQNTTAFKE 598
Query: 859 VAIIRHPRIGEYAF 818
VAII HPR GEYAF
Sbjct: 599 VAIISHPRAGEYAF 640
Score = 270 bits (585), Expect = 8e-072
Identities = 117/144 (81%), Positives = 124/144 (86%)
Frame = +3 / -2
Query: 819 NAYSPIRG*RIIATSLKAVVF*SGEIAVLTCFDAEYICLTNGIFFINHSPTQKMVEPTHE 998
NAYSP RG IIATSL AVVF*SGE AVLTCFDAEY+CLTNGIFFINHSPTQK VEPTH+
Sbjct: 639 NAYSPARGWLIIATSLNAVVF*SGETAVLTCFDAEYMCLTNGIFFINHSPTQKTVEPTHD 460
Query: 999 ETNIPTRNMNTREVKKPRPNMSIPIFAYRGLKKPSTN*INHHVMKNVTATGKRTTHPVIN 1178
+TNIPT NMNTR+V PRPN S P FA GLKKPS N INH VMKNVTA GK TTHPVIN
Sbjct: 459 DTNIPTINMNTRDVTNPRPNTSNPSFA*SGLKKPSKNRINHKVMKNVTAIGKITTHPVIN 280
Query: 1179 FLETQL*RTAQHALRVEVVGELGR 1250
FL+TQL*RTA+HALRVEV GE+GR
Sbjct: 279 FLDTQL*RTAKHALRVEVAGEVGR 208
Score = 195 bits (421), Expect = 3e-049
Identities = 80/135 (59%), Positives = 101/135 (74%)
Frame = +2 / -1
Query: 818 KCIFTNSWMTNYCNFFESSRILIW*NCSADLL*C*IYMSYKWHFLYKPLAHPEDG*TNP* 997
KC+FT++ M NYC+FF+ ILIW*N SA+LL*C IY+ YKWHFLYKP ++PED * +P*
Sbjct: 640 KCVFTSTGMANYCHFFKCCCILIW*NSSANLL*CRIYVPYKWHFLYKPFSNPEDS*AHP* 461
Query: 998 RNKYSNQKYEYQRSQKTKTKYVDSNFCI*GTEKTINKLNKPPCDEERDCNRKKDYTSSHK 1177
++YSN KYEY+R K K KYV+S CI TEKT+ + NKP DEE + + ++TSSHK
Sbjct: 460 *HEYSNNKYEYKRCHKPKAKYVESKLCIEWTEKTVEESNKPQSDEECHSHWENNHTSSHK 281
Query: 1178 LS*DPTLKNSTACLA 1222
LS* P LK+ ACLA
Sbjct: 280 LS*HPALKDGEACLA 236
Score = 191 bits (412), Expect = 6e-048
Identities = 84/134 (62%), Positives = 90/134 (67%)
Frame = -3 / +1
Query: 1250 ATQLAHHLHTQGMLCCSSKLGLKKVYDWMCSPFSCCSHVLHHMVVYSIC*WFFQSPICKN 1071
A LA HLH QGML SKLG+KKVYDWMC F +LHH VVYSI FFQS +CK
Sbjct: 208 APHLAGHLHPQGMLRRPSKLGVKKVYDWMCGYFPNGCDILHHFVVYSILRRFFQSTLCKA 387
Query: 1070 WNRHIWSWFFDFSGIHISGWNICFFMGWFNHLLGGRVVYKENAICKTYIFSIKASQHCNF 891
W R IW W D S IHI WNI MG N LLG R+VYKENAICK +IF IKAS HC F
Sbjct: 388 WIRRIWPWVCDISCIHIYCWNIRVIMGGLNCLLGWRMVYKENAICKAHIFCIKAS*HCCF 567
Query: 890 TRSKYDCFQRSCNN 849
TRSKY+ RS NN
Sbjct: 568 TRSKYNSI*RSGNN 609
Score = 151 bits (324), Expect = 8e-036
Identities = 83/134 (61%), Positives = 90/134 (67%)
Frame = +1 / -3
Query: 820 MHIHQFVDDELLQLL*KQSYFDLVKLQC*LALMLNIYVLQMAFSL*TTRPPRRWLNQPMK 999
M IHQ D LL LL* YFDLVK QC*LALM NI LQMAFSL*T PRR L+ PM
Sbjct: 638 MRIHQHGDG*LLPLL*MLLYFDLVKQQC*LALMQNICALQMAFSL*TILQPRRQLSPPMM 459
Query: 1000 KQIFQPEI*IPEKSKNQDQICRFQFLHIGD*KNHQQIE*TTM**RT*LQQEKGLHIQS*T 1179
+IFQ I*I E S+ Q QI R Q LH D*KN ++IE*TT **R K HIQS*T
Sbjct: 458 TRIFQQ*I*IQEMSQTQGQIRRIQALHRVD*KNRRRIE*TTK**RMSQPLGK*PHIQS*T 279
Query: 1180 FLRPNFEEQHSMPC 1221
FL P+FE + SMPC
Sbjct: 278 FLTPSFEGRRSMPC 237
Score = 117 bits (251), Expect = 1e-025
Identities = 61/100 (61%), Positives = 65/100 (65%)
Frame = -2 / +3
Query: 1119 GLFNLLMVFSVPYMQKLESTYLVLVF*LLWYSYFWLEYLFLHGLVQPSSGWASGL*RKCH 940
GLF+ VFSV MQ L+STYL L * L YSY LEY HG Q SSG +GL*RKCH
Sbjct: 339 GLFDSSTVFSVHSMQSLDSTYLALGL*HLLYSYLLLEYSCHHGWAQLSSGLENGL*RKCH 518
Query: 939 L*DIYIQHQSKSALQFHQIKIRLLSKKLQ*FVIHELVNMH 820
L* YI HQSK AL FHQIKI+ KK Q* I LVN H
Sbjct: 519 L*GTYILHQSKLALLFHQIKIQQHLKKWQ*LAIPVLVNTH 638
>gb|BJ473611.1|BJ473611 BJ473611 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15k07 3', mRNA sequence
Length = 699
Score = 297 bits (642), Expect = 1e-079
Identities = 114/162 (70%), Positives = 144/162 (88%)
Frame = -1 / -1
Query: 1084 LYAKIGIDIFGLGFLTSLVFIFLVGIFVSSWVGSTIFWVGEWFIKKMPFVRHIYSASKQV 905
+YA++GI+IFGLGF+TS+ FIF VG+F+SSWVG+++ +GEW IK+MP VRHIY+ASKQ+
Sbjct: 699 IYAQLGINIFGLGFITSVTFIFFVGVFMSSWVGASVLGIGEWIIKRMPLVRHIYNASKQI 520
Query: 904 STAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIG 725
S AISPDQN AFKE IIRHPRIGEYAFGFITS+V LQ+ G E+L VYVPTNHLYIG
Sbjct: 519 SAAISPDQNKQAFKEAVIIRHPRIGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNHLYIG 340
Query: 724 DIFLVNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLEPMP 599
DIF+VNS+++IRPNLS+REGIEI+VSGGM+MPQ++++L+P P
Sbjct: 339 DIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDPHP 214
Score = 165 bits (355), Expect = 4e-040
Identities = 80/157 (50%), Positives = 101/157 (64%)
Frame = +3 / +2
Query: 600 GMGSSDAIT*GMVIPPDTIISIPSRMDKLGLMISSEFTRNMSPMYR*FVGTYTLHSSSSP 779
G GS G+ IPP+T IS+PSR ++LGL+ S EFT +SP+ R VGTYT SS P
Sbjct: 215 GCGSRVDKIWGIDIPPETTISMPSRTERLGLITSFEFTMKISPI*RWLVGTYTQ*RSS*P 394
Query: 780 LSV*RTTVDVMNPNAYSPIRG*RIIATSLKAVVF*SGEIAVLTCFDAEYICLTNGIFFIN 959
+ R T +VMNPNAYSPIRG R++ SL A +F*SG+IA L C DA I T+G+ +
Sbjct: 395 E*LWRETDEVMNPNAYSPIRGCRMMTASLNACLF*SGDIAALICLDAL*IWRTSGMRLMI 574
Query: 960 HSPTQKMVEPTHEETNIPTRNMNTREVKKPRPNMSIP 1070
HSP + PT ++ PT+NM EV KPRP M IP
Sbjct: 575 HSPMPRTDAPTQDDMKTPTKNMKVTEVMKPRPKMLIP 685
Score = 107 bits (229), Expect = 1e-022
Identities = 53/133 (39%), Positives = 78/133 (58%)
Frame = +2 / +1
Query: 683 IRSYDLLRVHQKYVTDV*MICWHIHTTQFFIAFVSLKDHS*CYESKCIFTNSWMTNYCNF 862
IR Y +L VH + +T++ M+ W IHT + + ++L+ * ESKCIF N+ M
Sbjct: 298 IRPYHIL*VHHEDITNIKMVGWDIHTVKVLLTRIALERD**GNESKCIFPNTRMPYDDCL 477
Query: 863 FESSRILIW*NCSADLL*C*IYMSYKWHFLYKPLAHPEDG*TNP*RNKYSNQKYEYQRSQ 1042
E +LIW* S +LL + M++KWH L P + ++ +NP ++ SN+KYE RS
Sbjct: 478 LECLFVLIW*YSSTNLLGRIVDMAHKWHALNDPFTNAKNRCSNPR*HEDSNEKYESNRSD 657
Query: 1043 KTKTKYVDSNFCI 1081
+ KTK VDS CI
Sbjct: 658 EAKTKNVDSQLCI 696
>gb|BJ455168.1|BJ455168 BJ455168 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak35h23 3', mRNA sequence
Length = 697
Score = 296 bits (640), Expect = 2e-079
Identities = 114/161 (70%), Positives = 143/161 (88%)
Frame = -1 / -2
Query: 1081 YAKIGIDIFGLGFLTSLVFIFLVGIFVSSWVGSTIFWVGEWFIKKMPFVRHIYSASKQVS 902
YA++GI+IFGLGF+TS+ FIF VG+F+SSWVG+++ +GEW IK+MP VRHIY+ASKQ+S
Sbjct: 696 YAQLGINIFGLGFITSVTFIFFVGVFMSSWVGASVLGIGEWIIKRMPLVRHIYNASKQIS 517
Query: 901 TAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGD 722
AISPDQN AFKE IIRHPRIGEYAFGFITS+V LQ+ G E+L VYVPTNHLYIGD
Sbjct: 516 AAISPDQNKQAFKEAVIIRHPRIGEYAFGFITSSVSLQSYSGQEDLYCVYVPTNHLYIGD 337
Query: 721 IFLVNSEEIIRPNLSIREGIEIIVSGGMTMPQVIASLEPMP 599
IF+VNS+++IRPNLS+REGIEI+VSGGM+MPQ++++L+P P
Sbjct: 336 IFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDPHP 214
Score = 165 bits (355), Expect = 4e-040
Identities = 80/157 (50%), Positives = 101/157 (64%)
Frame = +3 / +2
Query: 600 GMGSSDAIT*GMVIPPDTIISIPSRMDKLGLMISSEFTRNMSPMYR*FVGTYTLHSSSSP 779
G GS G+ IPP+T IS+PSR ++LGL+ S EFT +SP+ R VGTYT SS P
Sbjct: 215 GCGSRVDKIWGIDIPPETTISMPSRTERLGLITSFEFTMKISPI*RWLVGTYTQ*RSS*P 394
Query: 780 LSV*RTTVDVMNPNAYSPIRG*RIIATSLKAVVF*SGEIAVLTCFDAEYICLTNGIFFIN 959
+ R T +VMNPNAYSPIRG R++ SL A +F*SG+IA L C DA I T+G+ +
Sbjct: 395 E*LWRETDEVMNPNAYSPIRGCRMMTASLNACLF*SGDIAALICLDAL*IWRTSGMRLMI 574
Query: 960 HSPTQKMVEPTHEETNIPTRNMNTREVKKPRPNMSIP 1070
HSP + PT ++ PT+NM EV KPRP M IP
Sbjct: 575 HSPMPRTDAPTQDDMKTPTKNMKVTEVMKPRPKMLIP 685
Score = 107 bits (229), Expect = 1e-022
Identities = 53/133 (39%), Positives = 78/133 (58%)
Frame = +2 / +1
Query: 683 IRSYDLLRVHQKYVTDV*MICWHIHTTQFFIAFVSLKDHS*CYESKCIFTNSWMTNYCNF 862
IR Y +L VH + +T++ M+ W IHT + + ++L+ * ESKCIF N+ M
Sbjct: 298 IRPYHIL*VHHEDITNIKMVGWDIHTVKVLLTRIALERD**GNESKCIFPNTRMPYDDCL 477
Query: 863 FESSRILIW*NCSADLL*C*IYMSYKWHFLYKPLAHPEDG*TNP*RNKYSNQKYEYQRSQ 1042
E +LIW* S +LL + M++KWH L P + ++ +NP ++ SN+KYE RS
Sbjct: 478 LECLFVLIW*YSSTNLLGRIVDMAHKWHALNDPFTNAKNRCSNPR*HEDSNEKYESNRSD 657
Query: 1043 KTKTKYVDSNFCI 1081
+ KTK VDS CI
Sbjct: 658 EAKTKNVDSQLCI 696
>gb|CV061394.1|CV061394 BNEL68d1 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL68d1 5' similar to unknown protein, mRNA
sequence
Length = 554
Score = 283 bits (613), Expect = 1e-075
Identities = 112/126 (88%), Positives = 121/126 (96%)
Frame = -1 / +2
Query: 1219 KACCAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKIGIDIFGLGFL 1040
KAC AVLQSWVSRKFMTGCVV+FP+AVTFFIT WFI+F DGFFSPLYAK+G D+FGLGF+
Sbjct: 176 KACFAVLQSWVSRKFMTGCVVIFPMAVTFFITLWFIRFFDGFFSPLYAKLGFDVFGLGFV 355
Query: 1039 TSLVFIFLVGIFVSSWVGSTIFWVGEWFIKKMPFVRHIYSASKQVSTAISPDQNTTAFKE 860
TSLVFIF+VGIFVSSWVGST+FWVGEWFIKKMPFVRHIYSASKQVSTA+SPDQNTTAFKE
Sbjct: 356 TSLVFIFIVGIFVSSWVGSTVFWVGEWFIKKMPFVRHIYSASKQVSTAVSPDQNTTAFKE 535
Query: 859 VAIIRH 842
VAII H
Sbjct: 536 VAIISH 553
Score = 256 bits (553), Expect = 2e-067
Identities = 110/134 (82%), Positives = 117/134 (87%)
Frame = +3 / -3
Query: 849 IIATSLKAVVF*SGEIAVLTCFDAEYICLTNGIFFINHSPTQKMVEPTHEETNIPTRNMN 1028
IIATSL AVVF*SGE AVLTCFDAEY+CLTNGIFFINHSPTQK VEPTH++TNIPT NMN
Sbjct: 546 IIATSLNAVVF*SGETAVLTCFDAEYMCLTNGIFFINHSPTQKTVEPTHDDTNIPTINMN 367
Query: 1029 TREVKKPRPNMSIPIFAYRGLKKPSTN*INHHVMKNVTATGKRTTHPVINFLETQL*RTA 1208
TR+V PRPN S P FA GLKKPS N INH VMKNVTA GK TTHPVINFL+TQL*RTA
Sbjct: 366 TRDVTNPRPNTSNPSFA*SGLKKPSKNRINHKVMKNVTAIGKITTHPVINFLDTQL*RTA 187
Query: 1209 QHALRVEVVGELGR 1250
+HALRVEV GE+GR
Sbjct: 186 KHALRVEVAGEVGR 145
Score = 193 bits (416), Expect = 2e-048
Identities = 85/134 (63%), Positives = 91/134 (67%)
Frame = -3 / +1
Query: 1250 ATQLAHHLHTQGMLCCSSKLGLKKVYDWMCSPFSCCSHVLHHMVVYSIC*WFFQSPICKN 1071
A LA HLH QGML SKLG+KKVYDWMCS F +LHH VVYSI FFQS +CK
Sbjct: 145 APHLAGHLHPQGMLRRPSKLGVKKVYDWMCSYFPNGCDILHHFVVYSILRRFFQSTLCKA 324
Query: 1070 WNRHIWSWFFDFSGIHISGWNICFFMGWFNHLLGGRVVYKENAICKTYIFSIKASQHCNF 891
W R IW W D S IHI WNI MG N LLG R+VYKENAICK +IF IKAS HC F
Sbjct: 325 WIRRIWPWVCDISCIHIYCWNIRVIMGGLNCLLGWRMVYKENAICKAHIFCIKAS*HCCF 504
Query: 890 TRSKYDCFQRSCNN 849
TRSKY+ RS NN
Sbjct: 505 TRSKYNSI*RSGNN 546
Score = 185 bits (398), Expect = 5e-046
Identities = 77/127 (60%), Positives = 94/127 (74%)
Frame = +2 / -2
Query: 842 MTNYCNFFESSRILIW*NCSADLL*C*IYMSYKWHFLYKPLAHPEDG*TNP*RNKYSNQK 1021
M NYC+FF+ ILIW*N SA+LL*C IY+ YKWHFLYKP ++PED * +P* ++YSN K
Sbjct: 553 MANYCHFFKCCCILIW*NSSANLL*CRIYVPYKWHFLYKPFSNPEDS*AHP**HEYSNNK 374
Query: 1022 YEYQRSQKTKTKYVDSNFCI*GTEKTINKLNKPPCDEERDCNRKKDYTSSHKLS*DPTLK 1201
YEY+R K K KYV+S CI TEKT+ + NKP DEE + + +YTSSHKLS* P LK
Sbjct: 373 YEYKRCHKPKAKYVESKLCIEWTEKTVEESNKPQSDEECHSHWENNYTSSHKLS*HPALK 194
Query: 1202 NSTACLA 1222
+ ACLA
Sbjct: 193 DGEACLA 173
Score = 146 bits (313), Expect = 3e-034
Identities = 80/127 (62%), Positives = 87/127 (68%)
Frame = +1 / -1
Query: 841 DDELLQLL*KQSYFDLVKLQC*LALMLNIYVLQMAFSL*TTRPPRRWLNQPMKKQIFQPE 1020
D LL LL* YFDLVK QC*LALM NI LQMAFSL*T PRR L+ PM +IFQ
Sbjct: 554 DG*LLPLL*MLLYFDLVKQQC*LALMQNICALQMAFSL*TILQPRRQLSPPMMTRIFQQ* 375
Query: 1021 I*IPEKSKNQDQICRFQFLHIGD*KNHQQIE*TTM**RT*LQQEKGLHIQS*TFLRPNFE 1200
I*I E S+ Q QI R Q LH D*KN ++IE*TT **R K LHIQS*TFL P+FE
Sbjct: 374 I*IQEMSQTQGQIRRIQALHRVD*KNRRRIE*TTK**RMSQPLGK*LHIQS*TFLTPSFE 195
Query: 1201 EQHSMPC 1221
+ SMPC
Sbjct: 194 GRRSMPC 174
Score = 110 bits (234), Expect = 2e-023
Identities = 57/93 (61%), Positives = 61/93 (65%)
Frame = -2 / +3
Query: 1119 GLFNLLMVFSVPYMQKLESTYLVLVF*LLWYSYFWLEYLFLHGLVQPSSGWASGL*RKCH 940
GLF+ VFSV MQ L+STYL L * L YSY LEY HG Q SSG +GL*RKCH
Sbjct: 276 GLFDSSTVFSVHSMQSLDSTYLALGL*HLLYSYLLLEYSCHHGWAQLSSGLENGL*RKCH 455
Query: 939 L*DIYIQHQSKSALQFHQIKIRLLSKKLQ*FVI 841
L* YI HQSK AL FHQIKI+ KK Q* I
Sbjct: 456 L*GTYILHQSKLALLFHQIKIQQHLKKWQ*LAI 554
>gb|CA014678.1|CA014678 HT12A16r HT Hordeum vulgare subsp. vulgare cDNA clone HT12A16
5-PRIME, mRNA sequence
Length = 675
Score = 260 bits (562), Expect = 1e-068
Identities = 102/108 (94%), Positives = 106/108 (98%)
Frame = -1 / +3
Query: 1210 CAVLQSWVSRKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKIGIDIFGLGFLTSL 1031
CAVLQSWVSRKFMTGCVVLFPVA TFFITWWF+QFVDGFFSPLYAKIG+DIFGLGFLTSL
Sbjct: 12 CAVLQSWVSRKFMTGCVVLFPVAFTFFITWWFVQFVDGFFSPLYAKIGVDIFGLGFLTSL 191
Query: 1030 VFIFLVGIFVSSWVGSTIFWVGEWFIKKMPFVRHIYSASKQVSTAISP 887
FIFLVGIFVSSWVGST+FWVGEWFIKKMPFV+HIYSASKQVSTAISP
Sbjct: 192 AFIFLVGIFVSSWVGSTVFWVGEWFIKKMPFVKHIYSASKQVSTAISP 335
Score = 237 bits (513), Expect = 7e-062
Identities = 96/108 (88%), Positives = 100/108 (92%)
Frame = +3 / -3
Query: 888 GEIAVLTCFDAEYICLTNGIFFINHSPTQKMVEPTHEETNIPTRNMNTREVKKPRPNMSI 1067
GE+AVLTCFDAEY+C TNGIFFINHSPTQK VEPTHEETNIPTRNMN R+VKKPRPNMS
Sbjct: 334 GEMAVLTCFDAEYMCFTNGIFFINHSPTQKTVEPTHEETNIPTRNMNARDVKKPRPNMST 155
Query: 1068 PIFAYRGLKKPSTN*INHHVMKNVTATGKRTTHPVINFLETQL*RTAQ 1211
PIFAY GLK PSTN* NHHVMKNV ATGKRTTHPVINFL+TQL*RTAQ
Sbjct: 154 PIFAYSGLKNPSTN*TNHHVMKNVKATGKRTTHPVINFLDTQL*RTAQ 11
Score = 225 bits (486), Expect = 4e-058
Identities = 85/109 (77%), Positives = 93/109 (85%)
Frame = -3 / +2
Query: 1211 LCCSSKLGLKKVYDWMCSPFSCCSHVLHHMVVYSIC*WFFQSPICKNWNRHIWSWFFDFS 1032
L CSS+LG++K+YDWMC FSCC HVLHHMVV SIC*W FQ ICKN +RHIWSWFFD S
Sbjct: 11 LRCSSELGIEKIYDWMCGSFSCCFHVLHHMVVRSIC*WIFQPTICKNRSRHIWSWFFDIS 190
Query: 1031 GIHISGWNICFFMGWFNHLLGGRVVYKENAICKTYIFSIKASQHCNFTR 885
GIHISGWNICFFMG FN LLG R+VYKENAI K +IF IKASQHC+FTR
Sbjct: 191 GIHISGWNICFFMGGFNCLLGWRMVYKENAIRKAHIFGIKASQHCHFTR 337
Score = 205 bits (443), Expect = 3e-052
Identities = 85/113 (75%), Positives = 97/113 (85%)
Frame = +2 / -2
Query: 875 RILIW*NCSADLL*C*IYMSYKWHFLYKPLAHPEDG*TNP*RNKYSNQKYEYQRSQKTKT 1054
R + W*N SADLL*C IY+ Y+WHFLYKP ++PED *T+P*RNKYSNQKYE QR QKTKT
Sbjct: 347 RRITW*NGSADLL*CRIYVLYEWHFLYKPFSNPEDS*THP*RNKYSNQKYECQRCQKTKT 168
Query: 1055 KYVDSNFCI*GTEKTINKLNKPPCDEERDCNRKKDYTSSHKLS*DPTLKNSTA 1213
KYVDS+FCI* EK+INKLN+PPCDEER+ NRKK++TSSHK S PTLKNS A
Sbjct: 167 KYVDSDFCI*WAEKSINKLNEPPCDEERESNRKKNHTSSHKFSRYPTLKNSAA 9
Score = 169 bits (363), Expect = 3e-041
Identities = 83/111 (74%), Positives = 88/111 (79%)
Frame = +1 / -1
Query: 883 DLVKLQC*LALMLNIYVLQMAFSL*TTRPPRRWLNQPMKKQIFQPEI*IPEKSKNQDQIC 1062
+LVK QC*LALM NI L+MAFSL*T PRR LN PMKKQIFQPEI*+PE SKNQDQIC
Sbjct: 339 NLVKWQC*LALMPNICALRMAFSL*TILQPRRQLNPPMKKQIFQPEI*MPEMSKNQDQIC 160
Query: 1063 RFQFLHIGD*KNHQQIE*TTM**RT*LQQEKGLHIQS*TFLRPNFEEQHSM 1215
R +FLHI *K HQQIE TTM**RT* QQEK HIQS* F PN EEQ S+
Sbjct: 159 RLRFLHIVG*KIHQQIERTTM**RT*KQQEKEPHIQS*IFSIPNSEEQRSL 7
Score = 151 bits (325), Expect = 6e-036
Identities = 64/86 (74%), Positives = 71/86 (82%)
Frame = -2 / +1
Query: 1125 HGGLFNLLMVFSVPYMQKLESTYLVLVF*LLWYSYFWLEYLFLHGLVQPSSGWASGL*RK 946
HGG FNLLM FS YMQK ESTYLVLVF* LW+SYFWLEYLFLHG VQ SSG +GL*RK
Sbjct: 97 HGGSFNLLMDFSAHYMQKSESTYLVLVF*HLWHSYFWLEYLFLHGWVQLSSGLENGL*RK 276
Query: 945 CHL*DIYIQHQSKSALQFHQIKIRLL 868
CH * YI+HQSKSAL FHQ+ +R++
Sbjct: 277 CHS*STYIRHQSKSALPFHQVILRII 354
>gb|CB858531.1|CB858531 HI07G08w HI Hordeum vulgare subsp. vulgare cDNA clone HI07G08
3-PRIME, mRNA sequence
Length = 580
Score = 176 bits (379), Expect = 2e-043
Identities = 74/86 (86%), Positives = 79/86 (91%)
Frame = -1 / -3
Query: 823 AFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPNLSIREGIEIIVSG 644
AFGFITS+++LQTDKGDEELCSVYVPTNHLYIGDIFLVNS EIIRPNLSIREGIEIIVSG
Sbjct: 578 AFGFITSSMILQTDKGDEELCSVYVPTNHLYIGDIFLVNSAEIIRPNLSIREGIEIIVSG 399
Query: 643 GMTMPQVIASLEPMPRKSQNIRLNRM 566
GMTMPQVI +L P P K+Q RLNRM
Sbjct: 398 GMTMPQVITALGPAPDKNQGTRLNRM 321
Score = 134 bits (287), Expect = 1e-030
Identities = 58/84 (69%), Positives = 69/84 (82%)
Frame = +3 / +1
Query: 573 FRRMFWLFRGMGSSDAIT*GMVIPPDTIISIPSRMDKLGLMISSEFTRNMSPMYR*FVGT 752
F+R+ W G G IT GMVIPP+TIISIPSRMD+LGL+IS+EFT+ +SP+YR* VGT
Sbjct: 328 FKRVPWFLSGAGPRAVITCGMVIPPETIISIPSRMDRLGLIISAEFTKKISPIYR*LVGT 507
Query: 753 YTLHSSSSPLSV*RTTVDVMNPNA 824
TLHSSSSPLSV*R +DV+NPNA
Sbjct: 508 *TLHSSSSPLSV*RIMLDVINPNA 579
>emb|AJ234443.1|HVU234443 Hordeum vulgare partial mRNA; clone cMWG0733.rev
Length = 239
Score = 157 bits (337), Expect = 1e-037
Identities = 53/78 (67%), Positives = 70/78 (89%)
Frame = -1 / +1
Query: 1174 MTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKIGIDIFGLGFLTSLVFIFLVGIFVSS 995
MTGCV+LFP+A+TF+ TWWFI FVDGFFSP+YA++G +IFGLGF+TS+ FIF VG+F+SS
Sbjct: 1 MTGCVILFPIAITFYFTWWFIHFVDGFFSPIYAQLGXNIFGLGFITSVTFIFFVGVFMSS 180
Query: 994 WVGSTIFWVGEWFIKKMP 941
WVG+++ +GEW IK+MP
Sbjct: 181 WVGASVLGIGEWIIKRMP 234
>gb|BJ447422.1|BJ447422 BJ447422 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak35h23 5', mRNA sequence
Length = 260
Score = 139 bits (299), Expect(2) = 3e-034
Identities = 51/73 (69%), Positives = 66/73 (90%)
Frame = -1 / +2
Query: 1105 VDGFFSPLYAKIGIDIFGLGFLTSLVFIFLVGIFVSSWVGSTIFWVGEWFIKKMPFVRHI 926
VDGFFSP+YA++GI+IFGLGF+TS+ FIF VG+F+SSWVG+++ +GEW IK+MP VRHI
Sbjct: 41 VDGFFSPIYAQLGINIFGLGFITSVTFIFFVGVFMSSWVGASVLGIGEWIIKRMPLVRHI 220
Query: 925 YSASKQVSTAISP 887
Y+ASKQ+S AISP
Sbjct: 221 YNASKQISAAISP 259
Score = 26.3 bits (51), Expect(2) = 3e-034
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -1 / +1
Query: 1135 FFITWWFIQF 1106
F++TWWFI +
Sbjct: 10 FYLTWWFIHY 39
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 545,556,026
Number of Sequences: 312970
Number of extensions: 8048401
Number of successful extensions: 41424
Number of sequences better than 1.0e-020: 20
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 15337212223
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)