TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419405.2.3
(1600 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgar... 313 e-123
gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgar... 290 e-107
gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedl... 290 e-103
gb|BQ465138.1|BQ465138 HU02M06r HU Hordeum vulgare subsp. v... 290 2e-095
gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachi... 311 1e-094
gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgar... 287 6e-094
gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachi... 304 2e-093
gb|BE060246.3|BE060246 HVSMEg0011L08f Hordeum vulgare pre-a... 212 2e-093
gb|AV917139.1|AV917139 AV917139 K. Sato unpublished cDNA li... 210 3e-089
gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgar... 228 4e-088
gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedl... 275 4e-087
gb|BI960089.1|BI960089 HVSMEn0023C15f Hordeum vulgare rachi... 292 6e-086
gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 ... 235 1e-085
gb|BM372935.2|BM372935 EBma04_SQ002_H04_R maternal, 10 DPA,... 279 6e-082
gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. v... 290 2e-081
gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachi... 302 3e-081
gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachi... 300 2e-080
gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachi... 296 3e-079
gb|BE454367.2|BE454367 HVSMEh0093N18f Hordeum vulgare 5-45 ... 220 8e-079
gb|BQ459628.1|BQ459628 HA08J01r HA Hordeum vulgare subsp. v... 151 3e-078
gb|CK124171.1|CK124171 BES1824107e17 BES1824 Hordeum vulgar... 151 2e-076
gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachi... 239 8e-076
gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. v... 283 1e-075
gb|BQ759881.1|BQ759881 EBpi05_SQ004_P16_R pistil, 8 DPA, no... 171 1e-074
gb|BI957582.1|BI957582 HVSMEn0010D14f Hordeum vulgare rachi... 258 1e-074
gb|BG310251.1|BG310251 HVSMEc0016K12f Hordeum vulgare seedl... 253 3e-074
gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachi... 275 5e-073
gb|BF256653.2|BF256653 HVSMEf0010J19f Hordeum vulgare seedl... 270 3e-072
gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachi... 267 1e-070
gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DA... 239 1e-070
gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm libra... 183 5e-070
gb|BF618493.2|BF618493 HVSMEc0005N13f Hordeum vulgare seedl... 215 2e-069
gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachi... 263 2e-069
gb|CB882163.1|CB882163 HL01B01w HL Hordeum vulgare subsp. v... 235 6e-069
gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm librar... 180 1e-068
gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachi... 239 8e-068
gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedl... 187 6e-066
gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DA... 239 1e-065
gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, dro... 246 1e-065
gb|BM097618.2|BM097618 EBem04_SQ002_D15_R embryo, 12 DPA, n... 249 3e-065
gb|BI957183.1|BI957183 HVSMEn0007P24f Hordeum vulgare rachi... 234 2e-063
gb|BF260026.3|BF260026 HVSMEf0020O13f Hordeum vulgare seedl... 136 3e-063
gb|BI959378.1|BI959378 HVSMEn0019H04f Hordeum vulgare rachi... 226 3e-063
gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library... 184 2e-062
gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm librar... 183 2e-062
gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. v... 183 2e-062
gb|BF253787.2|BF253787 HVSMEf0002C01f Hordeum vulgare seedl... 188 3e-062
gb|CV060955.1|CV060955 BNEL63c5 Barley EST endosperm librar... 118 7e-062
gb|BF259343.2|BF259343 HVSMEf0019F11f Hordeum vulgare seedl... 216 2e-061
gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. v... 181 2e-061
gb|CA031744.1|CA031744 HX11A03r HX Hordeum vulgare subsp. v... 237 2e-061
gb|BI959328.1|BI959328 HVSMEn0019E09f Hordeum vulgare rachi... 155 4e-061
gb|AV923254.1|AV923254 AV923254 K. Sato unpublished cDNA li... 230 4e-061
gb|CA022206.1|CA022206 HZ42H09r HZ Hordeum vulgare subsp. v... 235 5e-061
gb|BI950777.1|BI950777 HVSMEl0023C15f Hordeum vulgare spike... 119 2e-060
gb|CV058074.1|CV058074 BNEL34a7 Barley EST endosperm librar... 142 3e-060
gb|BU980194.1|BU980194 HA18P06r HA Hordeum vulgare subsp. v... 232 3e-060
gb|CA017263.1|CA017263 HV14A15u HV Hordeum vulgare subsp. v... 139 4e-060
gb|BF625170.3|BF625170 HVSMEa0006D08f Hordeum vulgare seedl... 228 7e-059
gb|BI959812.1|BI959812 HVSMEn0021L03f Hordeum vulgare rachi... 221 6e-058
gb|CA022237.1|CA022237 HZ42I19r HZ Hordeum vulgare subsp. v... 217 4e-057
gb|AL507275.1|AL507275 AL507275 Hordeum vulgare Barke devel... 185 2e-056
gb|CA023986.1|CA023986 HZ48A15r HZ Hordeum vulgare subsp. v... 214 2e-056
gb|BU967134.1|BU967134 HB03G05r BC Hordeum vulgare subsp. v... 183 9e-056
gb|AV928430.1|AV928430 AV928430 K. Sato unpublished cDNA li... 127 1e-055
gb|BI958420.1|BI958420 HVSMEn0014O10f Hordeum vulgare rachi... 140 4e-055
gb|CK124612.1|CK124612 BES1824109m10 BES1824 Hordeum vulgar... 215 7e-055
gb|CV055940.1|CV055940 BNEL12B5 Barley EST endosperm librar... 119 8e-055
gb|BU993991.1|BU993991 HM05E17r HM Hordeum vulgare subsp. v... 213 2e-054
gb|BI956858.1|BI956858 HVSMEn0005K24f Hordeum vulgare rachi... 137 2e-054
gb|BM101447.2|BM101447 EBpi01_SQ003_O01_R pistil, 1 DPA, no... 139 2e-054
gb|CW512145.1|CW512145 ToNAR_Morex_118b Morex Exon trapped ... 160 4e-054
gb|BQ758707.1|BQ758707 EBma07_SQ002_G16_R maternal, 21 DPA,... 210 1e-053
gb|BJ463021.1|BJ463021 BJ463021 K. Sato unpublished cDNA li... 119 7e-053
gb|BU978694.1|BU978694 HA14A06r HA Hordeum vulgare subsp. v... 200 1e-050
gb|AV917082.1|AV917082 AV917082 K. Sato unpublished cDNA li... 189 3e-050
gb|CV063456.1|CV063456 BNEL8E2 Barley EST endosperm library... 140 2e-049
gb|BF257093.3|BF257093 HVSMEf0011N11f Hordeum vulgare seedl... 122 3e-049
gb|BQ459308.1|BQ459308 HA01I15r HA Hordeum vulgare subsp. v... 110 3e-049
gb|BE603113.3|BE603113 HVSMEh0101P24f Hordeum vulgare 5-45 ... 193 2e-048
gb|BQ765573.1|BQ765573 EBro03_SQ007_F17_R root, 3 week, wat... 91 9e-048
gb|CV061225.1|CV061225 BNEL66d10 Barley EST endosperm libra... 133 2e-047
gb|CV054400.1|CV054400 BNEL10B12 Barley EST endosperm libra... 133 2e-047
gb|BG416780.1|BG416780 HVSMEk0014H23f Hordeum vulgare testa... 151 7e-047
gb|BI949344.1|BI949344 HVSMEl0013G22f Hordeum vulgare spike... 131 1e-046
gb|BU980984.1|BU980984 HA22E18r HA Hordeum vulgare subsp. v... 118 2e-046
gb|BM098205.2|BM098205 EBpi03_SQ002_N14_R pistil, 4 DPA, no... 118 2e-046
gb|CA019924.1|CA019924 HV13L18r HV Hordeum vulgare subsp. v... 122 3e-046
gb|AL504600.1|AL504600 AL504600 Hordeum vulgare Barke roots... 104 6e-046
gb|CB880652.1|CB880652 HM07E17w HM Hordeum vulgare subsp. v... 129 2e-045
gb|CB881234.1|CB881234 HM09C23w HM Hordeum vulgare subsp. v... 129 2e-045
gb|BQ764067.1|BQ764067 EBro03_SQ006_N05_R root, 3 week, wat... 120 4e-044
gb|BQ468475.1|BQ468475 HM01F21T HM Hordeum vulgare subsp. v... 147 5e-044
gb|BI957249.1|BI957249 HVSMEn0008G13f Hordeum vulgare rachi... 151 2e-043
gb|BI960393.1|BI960393 HVSMEn0024H07f Hordeum vulgare rachi... 175 7e-043
gb|BG368109.2|BG368109 HVSMEi0015L12f Hordeum vulgare 20 DA... 118 7e-043
gb|BG368652.1|BG368652 HVSMEi0020B24f Hordeum vulgare 20 DA... 116 1e-042
gb|CB883976.1|CB883976 HM06N05r HM Hordeum vulgare subsp. v... 147 1e-042
gb|BQ469285.1|BQ469285 HM03P13r HM Hordeum vulgare subsp. v... 173 3e-042
gb|BU983094.1|BU983094 HA28I14r HA Hordeum vulgare subsp. v... 97 8e-042
gb|BQ753409.1|BQ753409 EBan01_SQ004_D03_R anther, yellow st... 140 2e-041
gb|BU981754.1|BU981754 HA24I17r HA Hordeum vulgare subsp. v... 113 3e-041
gb|BI956518.1|BI956518 HVSMEn0003O09f Hordeum vulgare rachi... 167 1e-040
gb|BU990646.1|BU990646 HF25K12r HF Hordeum vulgare subsp. v... 128 4e-040
gb|BG368126.2|BG368126 HVSMEi0015M21f Hordeum vulgare 20 DA... 118 9e-040
gb|CB883447.1|CB883447 HQ02E17w HQ Hordeum vulgare subsp. v... 163 2e-039
gb|BQ467895.1|BQ467895 HR01E04r HR Hordeum vulgare subsp. v... 127 3e-039
gb|BQ469137.1|BQ469137 HM03I08r HM Hordeum vulgare subsp. v... 147 8e-039
gb|BU986289.1|BU986289 HF11E17r HF Hordeum vulgare subsp. v... 129 2e-038
gb|CA019796.1|CA019796 HV13D05r HV Hordeum vulgare subsp. v... 160 2e-038
gb|BU995044.1|BU995044 HM09A07r HM Hordeum vulgare subsp. v... 144 2e-038
gb|BG369116.2|BG369116 HVSMEi0021M10f Hordeum vulgare 20 DA... 108 4e-038
gb|BU981183.1|BU981183 HA22N23r HA Hordeum vulgare subsp. v... 97 2e-036
gb|BI958795.1|BI958795 HVSMEn0016K11f Hordeum vulgare rachi... 153 3e-036
gb|CB881182.1|CB881182 HM09A07w HM Hordeum vulgare subsp. v... 74 3e-035
gb|BG299356.2|BG299356 HVSMEa0019J09f Hordeum vulgare seedl... 125 3e-035
gb|BM442635.2|BM442635 EBan01_SQ003_L19_R anther, yellow st... 100 4e-035
gb|BF257559.2|BF257559 HVSMEf0013D22f Hordeum vulgare seedl... 99 4e-035
gb|CA018998.1|CA018998 HV10G08r HV Hordeum vulgare subsp. v... 97 4e-035
gb|CA004554.1|CA004554 HS17P08r HS Hordeum vulgare subsp. v... 143 4e-035
gb|BQ767036.1|BQ767036 EBro08_SQ007_G24_R root, 3 week, dro... 117 1e-034
gb|CB884030.1|CB884030 HM10H05r HM Hordeum vulgare subsp. v... 147 2e-034
gb|CB884057.1|CB884057 HM12C11r HM Hordeum vulgare subsp. v... 147 2e-034
gb|BI957226.1|BI957226 HVSMEn0008D17f Hordeum vulgare rachi... 146 4e-034
gb|CV054086.1|CV054086 BNEL106e9 Barley EST endosperm libra... 86 2e-033
gb|BQ764421.1|BQ764421 EBan01_SQ005_G21_R anther, yellow st... 144 2e-033
gb|BI954215.1|BI954215 HVSMEm0016K09f Hordeum vulgare green... 142 6e-033
gb|BE230894.2|BE230894 HVSMEg0001I02f Hordeum vulgare pre-a... 142 6e-033
gb|AJ461923.1|AJ461923 AJ461923 S00002 Hordeum vulgare subs... 139 3e-032
gb|BU984183.1|BU984183 HF03D17r HF Hordeum vulgare subsp. v... 129 1e-031
gb|CB882255.1|CB882255 HL01F14w HL Hordeum vulgare subsp. v... 137 1e-031
gb|BI956468.1|BI956468 HVSMEn0003I18f Hordeum vulgare rachi... 136 4e-031
gb|BJ453165.1|BJ453165 BJ453165 K. Sato unpublished cDNA li... 127 7e-031
gb|CA004842.1|CA004842 HS18N14r HS Hordeum vulgare subsp. v... 128 9e-031
gb|BM097179.2|BM097179 EBpi07_SQ002_K14_R pistil, 12 DPA, n... 129 9e-031
gb|BI958556.1|BI958556 HVSMEn0015J19f Hordeum vulgare rachi... 86 1e-030
gb|BJ460714.1|BJ460714 BJ460714 K. Sato unpublished cDNA li... 127 4e-030
gb|BE193443.3|BE193443 HVSMEh0081A10f Hordeum vulgare 5-45 ... 68 5e-030
gb|CA028060.1|CA028060 HZ60N21r HZ Hordeum vulgare subsp. v... 97 1e-029
gb|AV918397.1|AV918397 AV918397 K. Sato unpublished cDNA li... 128 9e-029
gb|CB876346.1|CB876346 HX11A03w HX Hordeum vulgare subsp. v... 128 9e-029
gb|BE421427.1|BE421427 HWM009.B12 ITEC HWM Barley Leaf Libr... 127 2e-028
gb|CA001233.1|CA001233 HS18N14u HS Hordeum vulgare subsp. v... 127 2e-028
gb|CB881625.1|CB881625 HM10G06w HM Hordeum vulgare subsp. v... 92 4e-028
gb|CB880524.1|CB880524 HM06N05w HM Hordeum vulgare subsp. v... 92 4e-028
gb|BQ661443.1|BQ661443 HM03I08u HM Hordeum vulgare subsp. v... 92 4e-028
gb|AV918336.1|AV918336 AV918336 K. Sato unpublished cDNA li... 126 4e-028
gb|BQ760850.1|BQ760850 EBro03_SQ003_K11_R root, 3 week, wat... 126 4e-028
gb|BJ467335.1|BJ467335 BJ467335 K. Sato unpublished cDNA li... 94 1e-027
gb|BQ470849.1|BQ470849 HX04D14r HX Hordeum vulgare subsp. v... 120 2e-027
gb|BQ764220.1|BQ764220 EBan01_SQ005_P04_R anther, yellow st... 122 4e-027
gb|AJ436682.1|AJ436682 AJ436682 S00002 Hordeum vulgare subs... 99 2e-026
gb|AJ463502.1|AJ463502 AJ463502 S00002 Hordeum vulgare subs... 99 2e-026
gb|BQ665573.1|BQ665573 HX04D14u HX Hordeum vulgare subsp. v... 120 3e-026
gb|CA001449.1|CA001449 HS17P08u HS Hordeum vulgare subsp. v... 118 9e-026
gb|BQ658207.1|BQ658207 HA05E07u HA Hordeum vulgare subsp. v... 63 7e-025
gb|BQ661556.1|BQ661556 HM03P13u HM Hordeum vulgare subsp. v... 114 2e-024
gb|BU978858.1|BU978858 HA14H15r HA Hordeum vulgare subsp. v... 84 2e-024
gb|BG300504.2|BG300504 HVSMEb0017E15f Hordeum vulgare seedl... 83 2e-024
gb|BF256315.1|BF256315 HVSMEf0009N16f Hordeum vulgare seedl... 112 4e-024
gb|BQ753618.1|BQ753618 EBan01_SQ004_M07_R anther, yellow st... 112 6e-024
gb|BQ662029.1|BQ662029 HR01E04u HR Hordeum vulgare subsp. v... 111 8e-024
gb|BG368897.2|BG368897 HVSMEi0021D09f Hordeum vulgare 20 DA... 66 5e-023
gb|BM442090.2|BM442090 EBan01_SQ002_C16_R anther, yellow st... 78 7e-023
gb|AL509792.1|AL509792 AL509792 Hordeum vulgare Barke devel... 78 1e-022
gb|CV061235.1|CV061235 BNEL66d9 Barley EST endosperm librar... 77 2e-021
gb|BQ663461.1|BQ663461 HU02M06u HU Hordeum vulgare subsp. v... 103 2e-021
gb|BF257516.2|BF257516 HVSMEf0013C01f Hordeum vulgare seedl... 101 9e-021
>gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P122 5-PRIME, mRNA sequence
Length = 717
Score = 313 bits (678), Expect(2) = e-123
Identities = 125/135 (92%), Positives = 128/135 (94%)
Frame = -3 / +1
Query: 1259 FMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGT 1080
F SM SCGNQPLFKDGKGCGSCYKIRCRKD SCSGRTETVIITDMNYYPV+ YHFDLSGT
Sbjct: 1 FASMTSCGNQPLFKDGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAPYHFDLSGT 180
Query: 1079 AFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDG 900
AFGRLAKPGLND+LRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDG
Sbjct: 181 AFGRLAKPGLNDRLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDG 360
Query: 899 DVVQVDLMESKTARG 855
DVVQVDLMES+ G
Sbjct: 361 DVVQVDLMESRGPGG 405
Score = 222 bits (480), Expect(2) = 7e-085
Identities = 98/133 (73%), Positives = 99/133 (74%)
Frame = +1 / -2
Query: 856 PRAVLDSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEW 1035
P DS+R AK*TGFEYSSTWNPI PGNSHGT VNSMSMMPEW
Sbjct: 404 PPGPRDSMRSTCTTSPSPSSYSTSTAK*TGFEYSSTWNPILSPGNSHGTRVNSMSMMPEW 225
Query: 1036 RSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLP 1215
RSLSL PG ASLPNAVPLRSKW TG**FMSVMITVSV PEQD SFLH IL* EP PLP
Sbjct: 224 RSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMITVSVLPEQDWSFLHLIL*HEPHPLP 45
Query: 1216 SLNNGWLPQEPMD 1254
SLNNGWLPQE MD
Sbjct: 44 SLNNGWLPQEVMD 6
Score = 151 bits (324), Expect(2) = e-123
Identities = 60/75 (80%), Positives = 65/75 (86%)
Frame = -3 / +1
Query: 863 ARGPPTGRWTPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVANNVIPANWRPNTFY 684
+RGP G+WT MRESWGSVWR+D+NHR+Q PFSIRIRNESGKTLVAN VIPANWRPNTFY
Sbjct: 388 SRGPGGGKWTRMRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPNTFY 567
Query: 683 RSFVQYS*PIGIRAL 639
RSFVQYS* R L
Sbjct: 568 RSFVQYS*SPFTRVL 612
Score = 112 bits (240), Expect(2) = 7e-085
Identities = 52/66 (78%), Positives = 52/66 (78%)
Frame = +1 / -2
Query: 664 LYWTKER*KVLGRQLAGMTLLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGVHR 843
LY TKER*KVLG QLAGMTLLATSVLPDSLRMRME G RWL S RQTEP DS I VH
Sbjct: 587 LYCTKER*KVLGLQLAGMTLLATSVLPDSLRMRMENGAWRRWLESRRQTEPHDSLILVHF 408
Query: 844 PVGGPR 861
P GPR
Sbjct: 407 PPPGPR 390
Score = 102 bits (217), Expect(3) = 6e-040
Identities = 45/53 (84%), Positives = 47/53 (88%)
Frame = +3 / -1
Query: 930 REVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSAA 1088
REVDGVRVLLHVEPDL+ RELARHP ELDVDDAGVAE VVE GL +PAER AA
Sbjct: 330 REVDGVRVLLHVEPDLEPRELARHPCELDVDDAGVAEPVVEPGLCEPAERCAA 172
Score = 98.2 bits (208), Expect(3) = 1e-033
Identities = 41/60 (68%), Positives = 44/60 (73%)
Frame = -2 / +3
Query: 1254 VHGLLRQPAIVXXXXXXXXXXQDSVQEGPVLLRADGDGDHHRHELLPGVQVPLRPQRHCV 1075
VH LLRQPAIV QD +QEGP+LLR DGDGDHHRHELLPG +PLRPQRH V
Sbjct: 6 VHDLLRQPAIVQGRQGMRLMLQDQMQEGPILLRQDGDGDHHRHELLPGGALPLRPQRHSV 185
Score = 75.8 bits (159), Expect(3) = 6e-040
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +2 / -3
Query: 647 GSRSVSCTGRRSGRRCWGASWPG*RCWRRASCRT 748
G R SCT RRSGRRCW +SWPG* CWRRASCRT
Sbjct: 604 G*RDFSCTARRSGRRCWASSWPG*PCWRRASCRT 503
Score = 48.7 bits (100), Expect(3) = 1e-033
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = -2 / +3
Query: 1011 VHQGAVRVPGPEDRVPRGGVLE 946
VH GAVRVPG +DRVPRGGVLE
Sbjct: 249 VHTGAVRVPGAQDRVPRGGVLE 314
Score = 41.4 bits (84), Expect(3) = 1e-033
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = -2 / +3
Query: 717 HPGQLAPQHLLPLLRPVQLTDRDPCPARNWSWLAGAL 607
HPGQL QHLLPLLR VQL P + LA +
Sbjct: 534 HPGQLEAQHLLPLLRAVQLKSLYPSTGNATTQLAATV 644
Score = 31.3 bits (62), Expect(3) = 6e-040
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / -1
Query: 1221 EQWLVAAGAHGHE 1259
EQWLVAAG HG E
Sbjct: 39 EQWLVAAGGHGRE 1
>gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010F166 5-PRIME, mRNA sequence
Length = 750
Score = 290 bits (627), Expect(3) = e-107
Identities = 112/142 (78%), Positives = 127/142 (89%)
Frame = -3 / +1
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FK+ N+YPFM+M SCGNQPLFKDGKGCG+CYKI+C K +CSGR ETV+ITDMNYYPV+
Sbjct: 94 FKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNYYPVAP 273
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVL 924
YHFDLSGTAFG+LAKPG ND+LRH+GIIDI+FTRV CEFPGLK+GFHVEE SN VY A+L
Sbjct: 274 YHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAVYMAIL 453
Query: 923 VEYEDGDGDVVQVDLMESKTAR 858
VEYE+GDGDVVQVDLMES R
Sbjct: 454 VEYENGDGDVVQVDLMESGRGR 519
Score = 184 bits (397), Expect(3) = 2e-068
Identities = 86/138 (62%), Positives = 91/138 (65%)
Frame = +1 / -2
Query: 871 DSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSL 1050
DS+R A T + SSTWNP F PGNSH TLVN MSMMP RS SL
Sbjct: 506 DSMRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSL 327
Query: 1051 RPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNG 1230
RPGLASLP AVPLRSKW TG**FMSV+ITVS RPE F+H IL* PQPLPSLN+G
Sbjct: 326 RPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSG 147
Query: 1231 WLPQEPMDMKGYWLVCLN 1284
WLPQE M M GY LN
Sbjct: 146 WLPQEVMAMNGYRFTFLN 93
Score = 102 bits (217), Expect(3) = e-107
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = -3 / +1
Query: 845 GRWTPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVANNVIP 711
GRWT MRESWGS+WR+D+NHR+Q PFSIRIRNESGKTLVA NVIP
Sbjct: 529 GRWTRMRESWGSIWRLDSNHRLQAPFSIRIRNESGKTLVARNVIP 663
Score = 87.7 bits (185), Expect(4) = 3e-035
Identities = 40/53 (75%), Positives = 42/53 (79%)
Frame = +3 / -1
Query: 930 REVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSAA 1088
R V V LLHVEP LQ RELARHPGELDVDDAGV+ELVV AGLG+ AE AA
Sbjct: 447 RHVHRVGPLLHVEPHLQPRELARHPGELDVDDAGVSELVVAAGLGELAEGGAA 289
Score = 87.7 bits (185), Expect(4) = 6e-028
Identities = 38/68 (55%), Positives = 43/68 (63%)
Frame = -2 / +3
Query: 1284 IQAHQPVPLHVHGLLRQPAIVXXXXXXXXXXQDSVQEGPVLLRADGDGDHHRHELLPGVQ 1105
+Q +PVP+H H LLRQPA V QD V E +LRA GDGD H HELLPG
Sbjct: 93 VQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQGVLRAAGDGDDHGHELLPGGA 272
Query: 1104 VPLRPQRH 1081
+PLRPQRH
Sbjct: 273 LPLRPQRH 296
Score = 77.6 bits (163), Expect(3) = 2e-068
Identities = 33/45 (73%), Positives = 34/45 (75%)
Frame = +1 / -2
Query: 712 GMTLLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGVHRP 846
GMTL ATSV PDSLRMRME G RWL S RQ +P DSRI VHRP
Sbjct: 662 GMTLRATSVXPDSLRMRMENGAWRRWLESRRQMDPHDSRIRVHRP 528
Score = 60.6 bits (126), Expect(4) = 3e-035
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +3 / -1
Query: 714 DDVVGDERLAGLVADADGEGRLHAVVGVHAPD 809
DDV GDERL GLVADADGE RL +VGV APD
Sbjct: 660 DDVAGDERLXGLVADADGEWRLETMVGVEAPD 565
Score = 38.6 bits (78), Expect(4) = 6e-028
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2 / +3
Query: 1011 VHQGAVRVPGPEDRVPRGG 955
VHQG VRVPG E VPRGG
Sbjct: 366 VHQGGVRVPGAEGGVPRGG 422
Score = 37.3 bits (75), Expect(3) = e-107
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3 / +2
Query: 713 PANWRPNTFYRSFVQY 666
P NWR NTFYRS VQY
Sbjct: 662 PKNWRXNTFYRSIVQY 709
Score = 37.3 bits (75), Expect(3) = 2e-068
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2 / -2
Query: 647 GSRSVSCTGRRSGRRCWGASWPG 715
G ++CTGR SGRRCW +S+ G
Sbjct: 728 GPSYLTCTGRWSGRRCWXSSFXG 660
Score = 35.0 bits (70), Expect(4) = 3e-035
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +3 / -1
Query: 1221 EQWLVAAGAHGHEGVLVGVLE 1283
EQ LVAAG HGHE V V VLE
Sbjct: 156 EQRLVAAGGHGHERVPVHVLE 94
Score = 29.9 bits (59), Expect(4) = 6e-028
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2 / +1
Query: 714 PGQLAPQHLLPLLRPVQL 661
P +L QHLLPL RPVQ+
Sbjct: 661 PXKLEXQHLLPLHRPVQV 714
Score = 29.5 bits (58), Expect(4) = 3e-035
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1 / -1
Query: 664 LYWTKER*KVLGRQLAG 714
LYWT ER*KVL Q G
Sbjct: 711 LYWTMER*KVLXLQFXG 661
Score = 24.0 bits (46), Expect(4) = 6e-028
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +3
Query: 843 AVDADARVLGL 811
AVDADARV+G+
Sbjct: 531 AVDADARVVGI 563
>gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0003B13f, mRNA sequence
Length = 789
Score = 290 bits (627), Expect(2) = e-103
Identities = 112/142 (78%), Positives = 127/142 (89%)
Frame = -3 / +2
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FK+ N+YPFM+M SCGNQPLFKDGKGCG+CYKI+C K +CSGR ETV+ITDMNYYPV+
Sbjct: 38 FKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNYYPVAP 217
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVL 924
YHFDLSGTAFG+LAKPG ND+LRH+GIIDI+FTRV CEFPGLK+GFHVEE SN VY A+L
Sbjct: 218 YHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAVYMAIL 397
Query: 923 VEYEDGDGDVVQVDLMESKTAR 858
VEYE+GDGDVVQVDLMES R
Sbjct: 398 VEYENGDGDVVQVDLMESGRGR 463
Score = 184 bits (397), Expect(2) = 2e-065
Identities = 86/138 (62%), Positives = 91/138 (65%)
Frame = +1 / -1
Query: 871 DSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSL 1050
DS+R A T + SSTWNP F PGNSH TLVN MSMMP RS SL
Sbjct: 450 DSMRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSL 271
Query: 1051 RPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNG 1230
RPGLASLP AVPLRSKW TG**FMSV+ITVS RPE F+H IL* PQPLPSLN+G
Sbjct: 270 RPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSG 91
Query: 1231 WLPQEPMDMKGYWLVCLN 1284
WLPQE M M GY LN
Sbjct: 90 WLPQEVMAMNGYRFTFLN 37
Score = 105 bits (225), Expect(2) = e-103
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = -3 / +2
Query: 845 GRWTPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVANNVIPANWRPNTFYRS 678
GRWT MRESWG +WR+D+NHR+Q PFSIRIRNESG+TLVA VIP RPNT Y S
Sbjct: 473 GRWTRMRESWGFIWRLDSNHRLQAPFSIRIRNESGQTLVAR*VIPKKGRPNTLYCS 640
Score = 87.7 bits (185), Expect(3) = 2e-029
Identities = 40/53 (75%), Positives = 42/53 (79%)
Frame = +3 / -3
Query: 930 REVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSAA 1088
R V V LLHVEP LQ RELARHPGELDVDDAGV+ELVV AGLG+ AE AA
Sbjct: 391 RHVHRVGPLLHVEPHLQPRELARHPGELDVDDAGVSELVVAAGLGELAEGGAA 233
Score = 87.7 bits (185), Expect(3) = 3e-024
Identities = 38/68 (55%), Positives = 43/68 (63%)
Frame = -2 / +1
Query: 1284 IQAHQPVPLHVHGLLRQPAIVXXXXXXXXXXQDSVQEGPVLLRADGDGDHHRHELLPGVQ 1105
+Q +PVP+H H LLRQPA V QD V E +LRA GDGD H HELLPG
Sbjct: 37 VQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQGVLRAAGDGDDHGHELLPGGA 216
Query: 1104 VPLRPQRH 1081
+PLRPQRH
Sbjct: 217 LPLRPQRH 240
Score = 85.8 bits (181), Expect(2) = 2e-065
Identities = 38/56 (67%), Positives = 39/56 (69%)
Frame = +1 / -1
Query: 679 ER*KVLGRQLAGMTLLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGVHRP 846
E+ KVLG GMT ATSV PDSLRMRME G C RWL S RQ P DSRI VHRP
Sbjct: 639 EQYKVLGLPFLGMT*RATSVCPDSLRMRMENGACRRWLESRRQMNPHDSRIRVHRP 472
Score = 51.0 bits (105), Expect(3) = 2e-029
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +3 / -3
Query: 714 DDVVGDERLAGLVADADGEGRLHAVVGVHAPD 809
DD+ G +RL GLVADADGE RL +VGV APD
Sbjct: 604 DDLAGYKRLPGLVADADGEWRL*TMVGVEAPD 509
Score = 38.6 bits (78), Expect(3) = 3e-024
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2 / +1
Query: 1011 VHQGAVRVPGPEDRVPRGG 955
VHQG VRVPG E VPRGG
Sbjct: 310 VHQGGVRVPGAEGGVPRGG 366
Score = 35.0 bits (70), Expect(3) = 2e-029
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +3 / -3
Query: 1221 EQWLVAAGAHGHEGVLVGVLE 1283
EQ LVAAG HGHE V V VLE
Sbjct: 100 EQRLVAAGGHGHERVPVHVLE 38
Score = 24.0 bits (46), Expect(3) = 3e-024
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +1
Query: 843 AVDADARVLGL 811
AVDADARV+G+
Sbjct: 475 AVDADARVVGI 507
>gb|BQ465138.1|BQ465138 HU02M06r HU Hordeum vulgare subsp. vulgare cDNA clone HU02M06
5-PRIME, mRNA sequence
Length = 623
Score = 290 bits (627), Expect(3) = 2e-095
Identities = 112/142 (78%), Positives = 127/142 (89%)
Frame = -3 / +2
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FK+ N+YPFM+M SCGNQPLFKDGKGCG+CYKI+C K +CSGR ETV+ITDMNYYPV+
Sbjct: 59 FKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNYYPVAP 238
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVL 924
YHFDLSGTAFG+LAKPG ND+LRH+GIIDI+FTRV CEFPGLK+GFHVEE SN VY A+L
Sbjct: 239 YHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAVYMAIL 418
Query: 923 VEYEDGDGDVVQVDLMESKTAR 858
VEYE+GDGDVVQVDLMES R
Sbjct: 419 VEYENGDGDVVQVDLMESGRGR 484
Score = 184 bits (397), Expect(3) = 4e-059
Identities = 86/138 (62%), Positives = 91/138 (65%)
Frame = +1 / -3
Query: 871 DSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSL 1050
DS+R A T + SSTWNP F PGNSH TLVN MSMMP RS SL
Sbjct: 471 DSMRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSL 292
Query: 1051 RPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNG 1230
RPGLASLP AVPLRSKW TG**FMSV+ITVS RPE F+H IL* PQPLPSLN+G
Sbjct: 291 RPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSG 112
Query: 1231 WLPQEPMDMKGYWLVCLN 1284
WLPQE M M GY LN
Sbjct: 111 WLPQEVMAMNGYRFTFLN 58
Score = 87.7 bits (185), Expect(3) = 6e-030
Identities = 40/53 (75%), Positives = 42/53 (79%)
Frame = +3 / -2
Query: 930 REVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSAA 1088
R V V LLHVEP LQ RELARHPGELDVDDAGV+ELVV AGLG+ AE AA
Sbjct: 412 RHVHRVGPLLHVEPHLQPRELARHPGELDVDDAGVSELVVAAGLGELAEGGAA 254
Score = 87.7 bits (185), Expect(3) = 3e-024
Identities = 38/68 (55%), Positives = 43/68 (63%)
Frame = -2 / +1
Query: 1284 IQAHQPVPLHVHGLLRQPAIVXXXXXXXXXXQDSVQEGPVLLRADGDGDHHRHELLPGVQ 1105
+Q +PVP+H H LLRQPA V QD V E +LRA GDGD H HELLPG
Sbjct: 58 VQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQGVLRAAGDGDDHGHELLPGGA 237
Query: 1104 VPLRPQRH 1081
+PLRPQRH
Sbjct: 238 LPLRPQRH 261
Score = 66.1 bits (138), Expect(3) = 2e-095
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = -3 / +3
Query: 806 WRMDTNHRMQPPFSIRIRNESGKTLVANNV 717
WR+D+NHR+Q PFSIRIRNESGKTLVA NV
Sbjct: 534 WRLDSNHRLQAPFSIRIRNESGKTLVARNV 623
Score = 57.9 bits (120), Expect(3) = 4e-059
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = +3 / -1
Query: 717 DVVGDERLAGLVADADGEGRLHAVVGVHAPD 809
DV GDERLAGLVADADGE RL +VGV AP+
Sbjct: 623 DVAGDERLAGLVADADGEWRLETMVGVEAPE 531
Score = 52.4 bits (108), Expect(3) = 6e-030
Identities = 23/30 (76%), Positives = 23/30 (76%)
Frame = +1 / -2
Query: 718 TLLATSVLPDSLRMRMEKGGCMRWLVSMRQ 807
TL ATSVLPDSLRMRME G RWL S RQ
Sbjct: 622 TLRATSVLPDSLRMRMENGAWRRWLESRRQ 533
Score = 38.6 bits (78), Expect(3) = 3e-024
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2 / +1
Query: 1011 VHQGAVRVPGPEDRVPRGG 955
VHQG VRVPG E VPRGG
Sbjct: 331 VHQGGVRVPGAEGGVPRGG 387
Score = 35.0 bits (70), Expect(3) = 6e-030
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +3 / -2
Query: 1221 EQWLVAAGAHGHEGVLVGVLE 1283
EQ LVAAG HGHE V V VLE
Sbjct: 121 EQRLVAAGGHGHERVPVHVLE 59
Score = 34.1 bits (68), Expect(3) = 2e-095
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3 / +2
Query: 845 GRWTPMRESWGSV 807
GRWT MRESWGS+
Sbjct: 494 GRWTRMRESWGSI 532
Score = 25.8 bits (50), Expect(3) = 4e-059
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -3
Query: 811 EPQDSRIGVHRP 846
+P DSRI VHRP
Sbjct: 528 DPHDSRIRVHRP 493
Score = 24.0 bits (46), Expect(3) = 3e-024
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +1
Query: 843 AVDADARVLGL 811
AVDADARV+G+
Sbjct: 496 AVDADARVVGI 528
>gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0018F10f,
mRNA sequence
Length = 669
Score = 311 bits (673), Expect(2) = 1e-094
Identities = 121/165 (73%), Positives = 137/165 (83%)
Frame = -3 / +3
Query: 1358 WQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
W+ ARATWY GFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 84 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 263
Query: 1178 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 999
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KLRHSGIIDI+F RV
Sbjct: 264 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 443
Query: 998 PCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESKT 864
PCEFPGLK+ FHVE+ SNPVYFAVLVEYEDGDGD+VQVDLME+ +
Sbjct: 444 PCEFPGLKVTFHVEQGSNPVYFAVLVEYEDGDGDLVQVDLMEANS 578
Score = 196 bits (423), Expect(2) = 3e-055
Identities = 89/139 (64%), Positives = 95/139 (68%)
Frame = +1 / -3
Query: 868 LDSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLS 1047
L S+R AK TGF+ STW RPGNSHGTL+N MSMMPE RS S
Sbjct: 574 LASMRSTCTKSPSPSSYSTSTAKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFS 395
Query: 1048 LRPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNN 1227
LRPGLA PNAVPLRSKWYL TG**FMSVM TVS PEQD S +HRI *QEP PLPSL
Sbjct: 394 LRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKM 215
Query: 1228 GWLPQEPMDMKGYWLVCLN 1284
G LP + M+ KGYWLV LN
Sbjct: 214 GSLPHDVMEEKGYWLVFLN 158
Score = 77.1 bits (162), Expect(3) = 5e-023
Identities = 36/51 (70%), Positives = 38/51 (74%)
Frame = +3 / -2
Query: 933 EVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSA 1085
EV VR LLHVE L+ RELARH ELDVDDAGV EL+ EAGLG AER A
Sbjct: 509 EVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 357
Score = 57.0 bits (118), Expect(2) = 1e-094
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = -3 / +1
Query: 866 TARGPPTGRWTPMRESWGSVWRMDTNHRMQPPFSI 762
T+ P R TPMRESWGS+WR+++ HR+Q PFS+
Sbjct: 559 TSWRPTPVRGTPMRESWGSIWRVESGHRLQAPFSM 663
Score = 40.0 bits (81), Expect(2) = 3e-055
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +1 / -2
Query: 763 MEKGGCMRWLVSMRQTEPQDSRIGVHR 843
MEKG RW S RQ +P DSRIGV R
Sbjct: 662 MEKGAWRRWPDSTRQIDPHDSRIGVPR 582
Score = 36.3 bits (73), Expect(3) = 5e-023
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = +3 / -2
Query: 1158 GAGRXXXXXXXXXXXXXXXXXEQWLVAAGAHGHEGVLVGVLE 1283
GAG E LVAA HG EGVLVGVLE
Sbjct: 284 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 159
Score = 32.7 bits (65), Expect(3) = 5e-023
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 1061 WPACRTQCR*GRSGTW 1108
WP RT+C GRSGTW
Sbjct: 381 WPWRRTRCHSGRSGTW 334
>gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010J225 5-PRIME, mRNA sequence
Length = 776
Score = 287 bits (621), Expect(2) = 6e-094
Identities = 110/137 (80%), Positives = 125/137 (91%)
Frame = -3 / +1
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FK+ N+YPFM+M SCGNQPLFKDGKGCG+CYKI+C K +CSGR ETV+ITDMNYYPV+
Sbjct: 211 FKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNYYPVAP 390
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVL 924
YHFDLSGTAFG+LAKPG ND+LRH+GIIDI+FTRV CEFPGLK+GFHVEE SN VY A+L
Sbjct: 391 YHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAVYMAIL 570
Query: 923 VEYEDGDGDVVQVDLME 873
VEYE+GDGDVVQVDLME
Sbjct: 571 VEYENGDGDVVQVDLME 621
Score = 182 bits (392), Expect(2) = 2e-055
Identities = 82/115 (71%), Positives = 86/115 (74%)
Frame = +1 / -1
Query: 940 TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG* 1119
T + SSTWNP F PGNSH TLVN MSMMP RS SLRPGLASLP AVPLRSKW TG*
Sbjct: 554 TALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG* 375
Query: 1120 *FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
*FMSV+ITVS RPE F+H IL* PQPLPSLN+GWLPQE M M GY LN
Sbjct: 374 *FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLN 210
Score = 87.7 bits (185), Expect(3) = 2e-027
Identities = 40/53 (75%), Positives = 42/53 (79%)
Frame = +3 / -3
Query: 930 REVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSAA 1088
R V V LLHVEP LQ RELARHPGELDVDDAGV+ELVV AGLG+ AE AA
Sbjct: 564 RHVHRVGPLLHVEPHLQPRELARHPGELDVDDAGVSELVVAAGLGELAEGGAA 406
Score = 87.7 bits (185), Expect(2) = 3e-022
Identities = 38/68 (55%), Positives = 43/68 (63%)
Frame = -2 / +3
Query: 1284 IQAHQPVPLHVHGLLRQPAIVXXXXXXXXXXQDSVQEGPVLLRADGDGDHHRHELLPGVQ 1105
+Q +PVP+H H LLRQPA V QD V E +LRA GDGD H HELLPG
Sbjct: 210 VQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQGVLRAAGDGDDHGHELLPGGA 389
Query: 1104 VPLRPQRH 1081
+PLRPQRH
Sbjct: 390 LPLRPQRH 413
Score = 78.5 bits (165), Expect(2) = 6e-094
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = -3 / +3
Query: 863 ARGPPTGRWTPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVANNV 717
A G GRWT M ESWGS+W +D+ +R+Q P SIRIRNESGK L A NV
Sbjct: 630 ADGAAAGRWTRMPESWGSIWGLDSXNRLQXPXSIRIRNESGKKLXARNV 776
Score = 54.7 bits (113), Expect(2) = 2e-055
Identities = 26/49 (53%), Positives = 27/49 (55%)
Frame = +1 / -2
Query: 718 TLLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGVHRPVGGPRA 864
TL A S PDSLRMRM G R L S Q +P DS VHRP P A
Sbjct: 775 TLRAXSFXPDSLRMRMXNGXWRRXLESRPQMDPHDSGXRVHRPAAAPSA 629
Score = 44.6 bits (91), Expect(3) = 2e-027
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = +3 / -1
Query: 717 DVVGDERLAGLVADADGEGRLHAVVGVHAPD 809
DV G E L GLVADADG L + GV APD
Sbjct: 776 DVAGXELLXGLVADADGXWXLETIXGVEAPD 684
Score = 38.6 bits (78), Expect(2) = 3e-022
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2 / +3
Query: 1011 VHQGAVRVPGPEDRVPRGG 955
VHQG VRVPG E VPRGG
Sbjct: 483 VHQGGVRVPGAEGGVPRGG 539
Score = 35.0 bits (70), Expect(3) = 2e-027
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +3 / -3
Query: 1221 EQWLVAAGAHGHEGVLVGVLE 1283
EQ LVAAG HGHE V V VLE
Sbjct: 273 EQRLVAAGGHGHERVPVHVLE 211
>gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0005E06f,
mRNA sequence
Length = 796
Score = 304 bits (659), Expect(2) = 2e-093
Identities = 120/170 (70%), Positives = 135/170 (79%)
Frame = -3 / +1
Query: 1358 WQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
W+ ARATWY GFK+TNQYPF SMG GN P+FKDGKGCGSCY+IRC
Sbjct: 67 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMGGGGNXPIFKDGKGCGSCYQIRC 246
Query: 1178 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 999
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KLRHSGIIDI+F RV
Sbjct: 247 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 426
Query: 998 PCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESKTARGPP 849
PCEFPGLK+ FHVE+ SNPVYFAVLVEY DGDGD+VQVDLME+ + P
Sbjct: 427 PCEFPGLKVTFHVEQGSNPVYFAVLVEYXDGDGDMVQVDLMEANSCTWTP 576
Score = 199 bits (429), Expect(2) = 1e-054
Identities = 90/139 (64%), Positives = 95/139 (68%)
Frame = +1 / -3
Query: 868 LDSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLS 1047
L S+R AK TGF+ STW RPGNSHGTL+N MSMMPE RS S
Sbjct: 557 LASMRSTCTMSPSPSSYSTSTAKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFS 378
Query: 1048 LRPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNN 1227
LRPGLA PNAVPLRSKWYL TG**FMSVM TVS PEQD S +HRI *QEP PLPSL
Sbjct: 377 LRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKM 198
Query: 1228 GWLPQEPMDMKGYWLVCLN 1284
G LP PM+ KGYWLV LN
Sbjct: 197 GXLPPPPMEEKGYWLVFLN 141
Score = 77.1 bits (162), Expect(3) = 7e-023
Identities = 36/51 (70%), Positives = 38/51 (74%)
Frame = +3 / -2
Query: 933 EVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSA 1085
EV VR LLHVE L+ RELARH ELDVDDAGV EL+ EAGLG AER A
Sbjct: 492 EVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 340
Score = 59.7 bits (124), Expect(2) = 2e-093
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = -3 / +1
Query: 839 WTPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTL 732
WTPMRESWGS+ R+D+ H +PP S + NE G+ L
Sbjct: 568 WTPMRESWGSILRLDSGHGWRPPLSFALXNEGGREL 675
Score = 35.9 bits (72), Expect(3) = 7e-023
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = +3 / -2
Query: 1158 GAGRXXXXXXXXXXXXXXXXXEQWLVAAGAHGHEGVLVGVLE 1283
GAG E LVAA HG EGVLVGVLE
Sbjct: 267 GAGLVVGAPYLVAGAASLAILEDGLVAAPPHGGEGVLVGVLE 142
Score = 35.4 bits (71), Expect(2) = 1e-054
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1 / -3
Query: 733 SVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGVH 840
S LP S +KGG S R+ +P DSRIGVH
Sbjct: 674 SSLPPSXLNANDKGGLQPCPESSRKIDPHDSRIGVH 567
Score = 32.7 bits (65), Expect(3) = 7e-023
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 1061 WPACRTQCR*GRSGTW 1108
WP RT+C GRSGTW
Sbjct: 364 WPWRRTRCHSGRSGTW 317
>gb|BE060246.3|BE060246 HVSMEg0011L08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011L08f, mRNA sequence
Length = 544
Score = 212 bits (458), Expect(2) = 2e-093
Identities = 85/92 (92%), Positives = 88/92 (95%)
Frame = -3 / +2
Query: 1130 DMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEY 951
DMNYYPV+ YHFDLSGTAFGRLAKPGLND+LRHSGIIDIEFTRVPCEFPGLKIGFHVEEY
Sbjct: 2 DMNYYPVAPYHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPCEFPGLKIGFHVEEY 181
Query: 950 SNPVYFAVLVEYEDGDGDVVQVDLMESKTARG 855
SNPVYFAVLVEYEDGDGDVVQVDLMES+ G
Sbjct: 182 SNPVYFAVLVEYEDGDGDVVQVDLMESRGPGG 277
Score = 151 bits (324), Expect(2) = 2e-093
Identities = 60/75 (80%), Positives = 65/75 (86%)
Frame = -3 / +2
Query: 863 ARGPPTGRWTPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVANNVIPANWRPNTFY 684
+RGP G+WT MRESWGSVWR+D+NHR+Q PFSIRIRNESGKTLVAN VIPANWRPNTFY
Sbjct: 260 SRGPGGGKWTRMRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPNTFY 439
Query: 683 RSFVQYS*PIGIRAL 639
RSFVQYS* R L
Sbjct: 440 RSFVQYS*SPFTRVL 484
Score = 142 bits (305), Expect(2) = 7e-061
Identities = 63/92 (68%), Positives = 64/92 (69%)
Frame = +1 / -2
Query: 856 PRAVLDSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEW 1035
P DS+R AK*TGFEYSSTWNPI PGNSHGT VNSMSMMPEW
Sbjct: 276 PPGPRDSMRSTCTTSPSPSSYSTSTAK*TGFEYSSTWNPILSPGNSHGTRVNSMSMMPEW 97
Query: 1036 RSLSLRPGLASLPNAVPLRSKWYLDTG**FMS 1131
RSLSL PG ASLPNAVPLRSKW TG**FMS
Sbjct: 96 RSLSLSPGFASLPNAVPLRSKW*GATG**FMS 1
Score = 112 bits (240), Expect(2) = 7e-061
Identities = 52/66 (78%), Positives = 52/66 (78%)
Frame = +1 / -2
Query: 664 LYWTKER*KVLGRQLAGMTLLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGVHR 843
LY TKER*KVLG QLAGMTLLATSVLPDSLRMRME G RWL S RQTEP DS I VH
Sbjct: 459 LYCTKER*KVLGLQLAGMTLLATSVLPDSLRMRMENGAWRRWLESRRQTEPHDSLILVHF 280
Query: 844 PVGGPR 861
P GPR
Sbjct: 279 PPPGPR 262
Score = 102 bits (217), Expect(2) = 8e-037
Identities = 45/53 (84%), Positives = 47/53 (88%)
Frame = +3 / -1
Query: 930 REVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSAA 1088
REVDGVRVLLHVEPDL+ RELARHP ELDVDDAGVAE VVE GL +PAER AA
Sbjct: 202 REVDGVRVLLHVEPDLEPRELARHPCELDVDDAGVAEPVVEPGLCEPAERRAA 44
Score = 75.8 bits (159), Expect(2) = 8e-037
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +2 / -3
Query: 647 GSRSVSCTGRRSGRRCWGASWPG*RCWRRASCRT 748
G R SCT RRSGRRCW +SWPG* CWRRASCRT
Sbjct: 476 G*RDFSCTARRSGRRCWASSWPG*PCWRRASCRT 375
>gb|AV917139.1|AV917139 AV917139 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20o17 5', mRNA sequence
Length = 590
Score = 210 bits (453), Expect(2) = 3e-089
Identities = 84/106 (79%), Positives = 94/106 (88%)
Frame = -3 / +1
Query: 1175 KDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVP 996
K +CSGR ETV+ITDMNYYPV+ YHFDLSGTAFG+LAKPG ND+LRH+GIIDI+FTRV
Sbjct: 7 KHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVA 186
Query: 995 CEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESKTAR 858
CEFPGLK+GFHVEE SN VY A+LVEYE+GDGDVVQVDLMES R
Sbjct: 187 CEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLMESGRGR 324
Score = 139 bits (299), Expect(2) = 3e-089
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = -3 / +1
Query: 845 GRWTPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVANNVIPANWRPNTFYRSFVQY 666
GRWT MRESWGS+WR+D+NHR+Q PFSIRIRNESGKTLVA NVIP NWRPNTFYRS VQY
Sbjct: 334 GRWTRMRESWGSIWRLDSNHRLQAPFSIRIRNESGKTLVARNVIPKNWRPNTFYRSIVQY 513
Query: 665 S* 660
S*
Sbjct: 514 S* 519
Score = 129 bits (276), Expect(2) = 4e-055
Identities = 61/97 (62%), Positives = 64/97 (65%)
Frame = +1 / -1
Query: 871 DSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSL 1050
DS+R A T + SSTWNP F PGNSH TLVN MSMMP RS SL
Sbjct: 311 DSMRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSL 132
Query: 1051 RPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPE 1161
RPGLASLP AVPLRSKW TG**FMSV+ITVS RPE
Sbjct: 131 RPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPE 21
Score = 106 bits (227), Expect(2) = 4e-055
Identities = 47/62 (75%), Positives = 48/62 (77%)
Frame = +1 / -1
Query: 661 *LYWTKER*KVLGRQLAGMTLLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGVH 840
*LYWT ER*KVLG Q GMTL ATSVLPDSLRMRME G RWL S RQ +P DSRI VH
Sbjct: 518 *LYWTMER*KVLGLQFLGMTLRATSVLPDSLRMRMENGAWRRWLESRRQMDPHDSRIRVH 339
Query: 841 RP 846
RP
Sbjct: 338 RP 333
Score = 87.7 bits (185), Expect(2) = 5e-031
Identities = 40/53 (75%), Positives = 42/53 (79%)
Frame = +3 / -3
Query: 930 REVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSAA 1088
R V V LLHVEP LQ RELARHPGELDVDDAGV+ELVV AGLG+ AE AA
Sbjct: 252 RHVHRVGPLLHVEPHLQPRELARHPGELDVDDAGVSELVVAAGLGELAEGGAA 94
Score = 68.0 bits (142), Expect(2) = 5e-031
Identities = 32/53 (60%), Positives = 33/53 (62%)
Frame = +3 / -3
Query: 651 PDRLAVLDXXXXXXXXXXXXRDDVVGDERLAGLVADADGEGRLHAVVGVHAPD 809
P LAVLD DDV GDERLAGLVADADGE RL +VGV APD
Sbjct: 528 PSYLAVLDDGAVEGVGPPVLGDDVAGDERLAGLVADADGEWRLETMVGVEAPD 370
>gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B0810 5-PRIME, mRNA sequence
Length = 638
Score = 228 bits (493), Expect(3) = 4e-088
Identities = 90/101 (89%), Positives = 92/101 (91%)
Frame = -3 / +3
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FKHTNQYPF SM SCGNQPLFKDGKGCGSCYKIRCRKD SCSGRTETVIITDMNYYPV+
Sbjct: 219 FKHTNQYPFASMTSCGNQPLFKDGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAP 398
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPG 981
YHFDLSGTAFGRLAKPGLND+LRHSGIIDIEFTR PG
Sbjct: 399 YHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRGAVGVPG 521
Score = 187 bits (402), Expect(3) = 5e-059
Identities = 81/100 (81%), Positives = 81/100 (81%)
Frame = +1 / -2
Query: 982 PGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPE 1161
PG VNSMSMMPEWRSLSL PG ASLPNAVPLRSKW TG**FMSVMITVSV PE
Sbjct: 520 PGTPTAPRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMITVSVLPE 341
Query: 1162 QDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCL 1281
QD SFLH IL* EP PLPSLNNGWLPQE MD GYWLVCL
Sbjct: 340 QDWSFLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCL 221
Score = 117 bits (251), Expect(2) = 3e-031
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2 / +2
Query: 1284 IQAHQPVPLHVHGLLRQPAIVXXXXXXXXXXQDSVQEGPVLLRADGDGDHHRHELLPGVQ 1105
+QAHQPVP+ VH LLRQPAIV QD +QEGP+LLR DGDGDHHRHELLPG
Sbjct: 218 LQAHQPVPVRVHDLLRQPAIVQGRQGMRLMLQDQMQEGPILLRQDGDGDHHRHELLPGGA 397
Query: 1104 VPLRPQRHCV 1075
+PLRPQRH V
Sbjct: 398 LPLRPQRHSV 427
Score = 90.0 bits (190), Expect(3) = 4e-088
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = -3 / +1
Query: 1001 VPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESK 867
VP EFPGLKIGFHV EYS PVYFAVLV +DGDGDVVQV LMES+
Sbjct: 502 VPWEFPGLKIGFHVXEYSXPVYFAVLVXXQDGDGDVVQVXLMESR 636
Score = 56.5 bits (117), Expect(3) = 5e-059
Identities = 26/44 (59%), Positives = 27/44 (61%)
Frame = +1 / -1
Query: 871 DSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGT 1002
DS+R AK*TG EYS TWNPI PGNSHGT
Sbjct: 632 DSMRXTCTTSPSPSXXSTSTAK*TGXEYSXTWNPILSPGNSHGT 501
Score = 51.0 bits (105), Expect(3) = 1e-021
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +3 / -3
Query: 930 REVDGVRVLLHVEPDLQARELARHP 1004
REVDG RVL HVEPDL+ REL RHP
Sbjct: 573 REVDGXRVLXHVEPDLEPRELPRHP 499
Score = 50.6 bits (104), Expect(3) = 1e-021
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = +3 / -1
Query: 1002 PGELDVDDAGVAELVVEAGLGQPAERSAA 1088
P ELDVDDAGVAE VVE GL +PAER AA
Sbjct: 500 PCELDVDDAGVAEPVVEPGLCEPAERCAA 414
Score = 46.9 bits (96), Expect(3) = 4e-088
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3 / +3
Query: 1430 LDAADAGTGTENYTASDAAVYWGPWQRARATWY 1332
L+A DA + +DA YWGPW ARATWY
Sbjct: 72 LNATDASPFDVDLNVTDATKYWGPWTPARATWY 170
Score = 45.1 bits (92), Expect(3) = 1e-021
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3 / -1
Query: 1221 EQWLVAAGAHGHEGVLVGVLES 1286
EQWLVAAG HG E VLVGVLE+
Sbjct: 281 EQWLVAAGGHGRERVLVGVLEA 216
Score = 38.6 bits (78), Expect(2) = 3e-031
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -2 / +3
Query: 1005 QGAVRVPGPEDRVPRGGVL 949
+GAV VPG +DRVPRGGVL
Sbjct: 498 RGAVGVPGAQDRVPRGGVL 554
Score = 24.4 bits (47), Expect(3) = 5e-059
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / -2
Query: 1333 YQVARALCQGPQY 1371
YQVA A QGPQY
Sbjct: 169 YQVALAGVQGPQY 131
>gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0009C23f, mRNA sequence
Length = 762
Score = 275 bits (596), Expect(3) = 4e-087
Identities = 108/135 (80%), Positives = 117/135 (86%)
Frame = -3 / +3
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FKH NQYPF SM SCGNQPLFKDGKGCGSCY+IRC D SCSG ETV+ITDMNYYPV++
Sbjct: 264 FKHVNQYPFSSMTSCGNQPLFKDGKGCGSCYQIRCSGDRSCSGNIETVMITDMNYYPVAQ 443
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVL 924
YHFDLSGTAFG LAK GLN+KLRHSGIIDI+F RVPC FPGLKI FHV E SN VY AVL
Sbjct: 444 YHFDLSGTAFGALAKSGLNEKLRHSGIIDIQFRRVPCNFPGLKINFHVVEGSNAVYLAVL 623
Query: 923 VEYEDGDGDVVQVDL 879
+EYED DGDV+QVD+
Sbjct: 624 IEYEDMDGDVIQVDM 668
Score = 198 bits (427), Expect(2) = 9e-056
Identities = 84/117 (71%), Positives = 91/117 (77%)
Frame = +1 / -3
Query: 931 AK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLD 1110
A+ T E S+TW I RPG HGTL+N MSMMPEWRS SLRP LA P AVPLRSKWY
Sbjct: 616 ARYTALEPSTTWKLILRPGKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWA 437
Query: 1111 TG**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCL 1281
TG**FMSV+ITVS+ PEQ+ S LHRI *QEPQPLPSLN GWLPQE M+ KGYW CL
Sbjct: 436 TG**FMSVIITVSMLPEQERSPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFTCL 266
Score = 84.9 bits (179), Expect(3) = 1e-022
Identities = 37/68 (54%), Positives = 44/68 (64%)
Frame = -2 / +2
Query: 1284 IQAHQPVPLHVHGLLRQPAIVXXXXXXXXXXQDSVQEGPVLLRADGDGDHHRHELLPGVQ 1105
+QA +PVPL +H LLRQPA V D++Q P+LLR DGD HRHELLPG
Sbjct: 263 LQAREPVPLLLHDLLRQPAPVQGRQGLRLLLPDTMQRRPLLLRQHRDGDDHRHELLPGRP 442
Query: 1104 VPLRPQRH 1081
VPL P+RH
Sbjct: 443 VPL*PERH 466
Score = 58.8 bits (122), Expect(3) = 4e-087
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -3 / +3
Query: 860 RGPPTGRWTPMRESWGSVWRMDTNHRMQPP 771
+G +G W MRESWGS+WRMD+NHR+Q P
Sbjct: 669 KGANSGSWMAMRESWGSIWRMDSNHRLQGP 758
Score = 40.0 bits (81), Expect(2) = 9e-056
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1 / -3
Query: 769 KGGCMRWLVSMRQTEPQDSRIGVHRPVGGP 858
KG RWL S+RQ +P DSRI +H P P
Sbjct: 760 KGP*SRWLESIRQMDPHDSRIAIHDPELAP 671
Score = 35.4 bits (71), Expect(3) = 1e-022
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = -2 / +2
Query: 1011 VHQGAVRVPGPEDRVPRGGVLE 946
V +GAV++P P+D++PRGG L+
Sbjct: 536 VQEGAVQLPRPQDQLPRGGGLQ 601
Score = 27.6 bits (54), Expect(3) = 4e-087
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -3 / +3
Query: 1436 AQLDAADAGTGTENYTASDAAVYWGPWQRARATWY 1332
A L AA G + A Y W ARATWY
Sbjct: 111 AVLAAAYGGXXAAVNLNTSAVSYSSAWLPARATWY 215
Score = 24.4 bits (47), Expect(3) = 1e-022
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / +1
Query: 829 CASPGAPSGAW 797
CAS G PSG W
Sbjct: 700 CASRGDPSGGW 732
>gb|BI960089.1|BI960089 HVSMEn0023C15f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0023C15f,
mRNA sequence
Length = 646
Score = 292 bits (632), Expect(2) = 6e-086
Identities = 114/120 (95%), Positives = 116/120 (96%)
Frame = -3 / +2
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FKHTNQYPF SM SCGNQPLFKDGKGCGSCYKIRCRKD SCSGRTETVIITDMNYYPV+
Sbjct: 287 FKHTNQYPFASMTSCGNQPLFKDGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAP 466
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVL 924
YHFDLSGTAFGRLAKPGLND+LRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVL
Sbjct: 467 YHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVL 646
Score = 238 bits (514), Expect(2) = 5e-063
Identities = 101/117 (86%), Positives = 101/117 (86%)
Frame = +1 / -2
Query: 931 AK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLD 1110
AK*TGFEYSSTWNPI PGNSHGT VNSMSMMPEWRSLSL PG ASLPNAVPLRSKW
Sbjct: 639 AK*TGFEYSSTWNPILSPGNSHGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GA 460
Query: 1111 TG**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCL 1281
TG**FMSVMITVSV PEQD SFLH IL* EP PLPSLNNGWLPQE MD GYWLVCL
Sbjct: 459 TG**FMSVMITVSVLPEQDWSFLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCL 289
Score = 114 bits (243), Expect(2) = 3e-033
Identities = 47/70 (67%), Positives = 53/70 (75%)
Frame = -2 / +1
Query: 1284 IQAHQPVPLHVHGLLRQPAIVXXXXXXXXXXQDSVQEGPVLLRADGDGDHHRHELLPGVQ 1105
+QAHQPVP+ VH LLRQPAIV QD +QEGP+LLR DGDGDH+RHELLPG
Sbjct: 286 LQAHQPVPVRVHDLLRQPAIVQGRQGMRLMLQDQMQEGPILLRQDGDGDHYRHELLPGGA 465
Query: 1104 VPLRPQRHCV 1075
+PLRPQRH V
Sbjct: 466 LPLRPQRHGV 495
Score = 102 bits (217), Expect(2) = 1e-027
Identities = 45/53 (84%), Positives = 47/53 (88%)
Frame = +3 / -1
Query: 930 REVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSAA 1088
REVDGVRVLLHVEPDL+ RELARHP ELDVDDAGVAE VVE GL +PAER AA
Sbjct: 640 REVDGVRVLLHVEPDLEPRELARHPCELDVDDAGVAEPVVEPGLCEPAERRAA 482
Score = 48.7 bits (100), Expect(2) = 3e-033
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = -2 / +1
Query: 1011 VHQGAVRVPGPEDRVPRGGVLE 946
VH GAVRVPG +DRVPRGGVLE
Sbjct: 559 VHTGAVRVPGAQDRVPRGGVLE 624
Score = 46.9 bits (96), Expect(2) = 6e-086
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3 / +2
Query: 1430 LDAADAGTGTENYTASDAAVYWGPWQRARATWY 1332
L+A DA + +DA YWGPW ARATWY
Sbjct: 140 LNATDASPFDVDLNVTDATKYWGPWTPARATWY 238
Score = 45.1 bits (92), Expect(2) = 1e-027
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3 / -1
Query: 1221 EQWLVAAGAHGHEGVLVGVLES 1286
EQWLVAAG HG E VLVGVLE+
Sbjct: 349 EQWLVAAGGHGRERVLVGVLEA 284
Score = 24.4 bits (47), Expect(2) = 5e-063
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / -2
Query: 1333 YQVARALCQGPQY 1371
YQVA A QGPQY
Sbjct: 237 YQVALAGVQGPQY 199
>gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0092D24f, mRNA sequence
Length = 901
Score = 235 bits (508), Expect(3) = 1e-085
Identities = 91/128 (71%), Positives = 102/128 (79%)
Frame = -3 / +1
Query: 1358 WQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
W+ ARATWY GFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 106 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 285
Query: 1178 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 999
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KLRHSGIIDI+F RV
Sbjct: 286 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 465
Query: 998 PCEFPGLK 975
PCEFP LK
Sbjct: 466 PCEFPCLK 489
Score = 174 bits (374), Expect(2) = 2e-046
Identities = 77/102 (75%), Positives = 81/102 (79%)
Frame = +1 / -3
Query: 979 RPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRP 1158
R GNSHGTL+N MSMMPE RS SLRPGLA PNAVPLRSKWYL TG**FMSVM TVS P
Sbjct: 485 RQGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLP 306
Query: 1159 EQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
EQD S +HRI *QEP PLPSL G LP + M+ KGYWLV LN
Sbjct: 305 EQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLN 180
Score = 62.5 bits (130), Expect(3) = 1e-085
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = -3 / +3
Query: 986 PGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQ 888
P ++ FHVE+ SNPVYFAVL EYEDGDGDVVQ
Sbjct: 477 PLSQVTFHVEQXSNPVYFAVLGEYEDGDGDVVQ 575
Score = 59.3 bits (123), Expect(3) = 1e-085
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -3 / +3
Query: 857 GPPTGRWTPMRESWGSVWRMDTNHRMQPPFS 765
G G WTPMRESWGS+W +D HR+Q PFS
Sbjct: 588 GANFGTWTPMRESWGSIWGLDFGHRLQAPFS 680
Score = 32.7 bits (65), Expect(2) = 2e-046
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +1 / -1
Query: 766 EKGGCMRWLVSMRQTEPQDSRIGVHRPVGGP 858
EKG R S Q +P DSRIGVH P P
Sbjct: 679 EKGA*SRCPKSSPQMDPHDSRIGVHVPKLAP 587
>gb|BM372935.2|BM372935 EBma04_SQ002_H04_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_H04 5', mRNA sequence
Length = 612
Score = 279 bits (603), Expect(2) = 6e-082
Identities = 108/114 (94%), Positives = 110/114 (96%)
Frame = -3 / +2
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FKHTNQYPF SM SCGNQPLFKDGKGCGSCYKIRCRKD SCSGRTETVIITDMNYYPV+
Sbjct: 269 FKHTNQYPFASMTSCGNQPLFKDGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAP 448
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNP 942
YHFDLSGTAFGRLAKPGLND+LRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNP
Sbjct: 449 YHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNP 610
Score = 233 bits (504), Expect(2) = 1e-061
Identities = 98/114 (85%), Positives = 98/114 (85%)
Frame = +1 / -1
Query: 940 TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG* 1119
TGFEYSSTWNPI PGNSHGT VNSMSMMPEWRSLSL PG ASLPNAVPLRSKW TG*
Sbjct: 612 TGFEYSSTWNPILSPGNSHGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG* 433
Query: 1120 *FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCL 1281
*FMSVMITVSV PEQD SFLH IL* EP PLPSLNNGWLPQE MD GYWLVCL
Sbjct: 432 *FMSVMITVSVLPEQDWSFLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCL 271
Score = 117 bits (251), Expect(2) = 3e-034
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2 / +1
Query: 1284 IQAHQPVPLHVHGLLRQPAIVXXXXXXXXXXQDSVQEGPVLLRADGDGDHHRHELLPGVQ 1105
+QAHQPVP+ VH LLRQPAIV QD +QEGP+LLR DGDGDHHRHELLPG
Sbjct: 268 LQAHQPVPVRVHDLLRQPAIVQGRQGMRLMLQDQMQEGPILLRQDGDGDHHRHELLPGGA 447
Query: 1104 VPLRPQRHCV 1075
+PLRPQRH V
Sbjct: 448 LPLRPQRHSV 477
Score = 93.2 bits (197), Expect(3) = 3e-029
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +3 / -3
Query: 942 GVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSAA 1088
GVRVLLHVEPDL+ RELARHP ELDVDDAGVAE VVE GL +PAER AA
Sbjct: 610 GVRVLLHVEPDLEPRELARHPCELDVDDAGVAEPVVEPGLCEPAERCAA 464
Score = 48.7 bits (100), Expect(2) = 3e-034
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = -2 / +1
Query: 1011 VHQGAVRVPGPEDRVPRGGVLE 946
VH GAVRVPG +DRVPRGGVLE
Sbjct: 541 VHTGAVRVPGAQDRVPRGGVLE 606
Score = 46.9 bits (96), Expect(2) = 6e-082
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3 / +2
Query: 1430 LDAADAGTGTENYTASDAAVYWGPWQRARATWY 1332
L+A DA + +DA YWGPW ARATWY
Sbjct: 122 LNATDASPFDVDLNVTDATKYWGPWTPARATWY 220
Score = 45.1 bits (92), Expect(3) = 3e-029
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3 / -3
Query: 1221 EQWLVAAGAHGHEGVLVGVLES 1286
EQWLVAAG HG E VLVGVLE+
Sbjct: 331 EQWLVAAGGHGRERVLVGVLEA 266
Score = 29.0 bits (57), Expect(3) = 3e-029
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / -2
Query: 1067 ACRTQCR*GRSG 1102
ACRT CR*GRSG
Sbjct: 485 ACRTLCR*GRSG 450
Score = 24.4 bits (47), Expect(2) = 1e-061
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / -1
Query: 1333 YQVARALCQGPQY 1371
YQVA A QGPQY
Sbjct: 219 YQVALAGVQGPQY 181
>gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. vulgare cDNA clone HV14A15
5-PRIME, mRNA sequence
Length = 616
Score = 290 bits (627), Expect(2) = 2e-081
Identities = 112/142 (78%), Positives = 127/142 (89%)
Frame = -3 / +1
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FK+ N+YPFM+M SCGNQPLFKDGKGCG+CYKI+C K +CSGR ETV+ITDMNYYPV+
Sbjct: 142 FKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNYYPVAP 321
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVL 924
YHFDLSGTAFG+LAKPG ND+LRH+GIIDI+FTRV CEFPGLK+GFHVEE SN VY A+L
Sbjct: 322 YHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAVYMAIL 501
Query: 923 VEYEDGDGDVVQVDLMESKTAR 858
VEYE+GDGDVVQVDLMES R
Sbjct: 502 VEYENGDGDVVQVDLMESGRGR 567
Score = 184 bits (397), Expect(2) = 2e-047
Identities = 86/138 (62%), Positives = 91/138 (65%)
Frame = +1 / -3
Query: 871 DSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSL 1050
DS+R A T + SSTWNP F PGNSH TLVN MSMMP RS SL
Sbjct: 554 DSMRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSL 375
Query: 1051 RPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNG 1230
RPGLASLP AVPLRSKW TG**FMSV+ITVS RPE F+H IL* PQPLPSLN+G
Sbjct: 374 RPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSG 195
Query: 1231 WLPQEPMDMKGYWLVCLN 1284
WLPQE M M GY LN
Sbjct: 194 WLPQEVMAMNGYRFTFLN 141
Score = 87.7 bits (185), Expect(3) = 3e-024
Identities = 38/68 (55%), Positives = 43/68 (63%)
Frame = -2 / +3
Query: 1284 IQAHQPVPLHVHGLLRQPAIVXXXXXXXXXXQDSVQEGPVLLRADGDGDHHRHELLPGVQ 1105
+Q +PVP+H H LLRQPA V QD V E +LRA GDGD H HELLPG
Sbjct: 141 VQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQGVLRAAGDGDDHGHELLPGGA 320
Query: 1104 VPLRPQRH 1081
+PLRPQRH
Sbjct: 321 LPLRPQRH 344
Score = 38.6 bits (78), Expect(3) = 3e-024
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2 / +3
Query: 1011 VHQGAVRVPGPEDRVPRGG 955
VHQG VRVPG E VPRGG
Sbjct: 414 VHQGGVRVPGAEGGVPRGG 470
Score = 34.1 bits (68), Expect(2) = 2e-081
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3 / +1
Query: 845 GRWTPMRESWGSV 807
GRWT MRESWGS+
Sbjct: 577 GRWTRMRESWGSI 615
Score = 25.8 bits (50), Expect(2) = 2e-047
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -3
Query: 811 EPQDSRIGVHRP 846
+P DSRI VHRP
Sbjct: 611 DPHDSRIRVHRP 576
Score = 24.0 bits (46), Expect(3) = 3e-024
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +3
Query: 843 AVDADARVLGL 811
AVDADARV+G+
Sbjct: 579 AVDADARVVGI 611
>gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0010F11f,
mRNA sequence
Length = 630
Score = 302 bits (654), Expect = 3e-081
Identities = 118/163 (72%), Positives = 134/163 (82%)
Frame = -3 / +1
Query: 1358 WQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
W+ ARATWY GFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 142 WEDARATWYGARTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 321
Query: 1178 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 999
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KLRHSGIIDI+F RV
Sbjct: 322 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 501
Query: 998 PCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMES 870
PCEFPGLK+ FHVE+ SNPVYF VLVEY DGDG++VQVDLME+
Sbjct: 502 PCEFPGLKVTFHVEQGSNPVYFPVLVEY*DGDGNLVQVDLMEA 630
Score = 193 bits (415), Expect = 3e-048
Identities = 85/117 (72%), Positives = 90/117 (76%)
Frame = +1 / -2
Query: 934 K*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDT 1113
K TGF+ STW RPGNSHGTL+N MSMMPE RS SLRPGLA PNAVPLRSKWYL T
Sbjct: 566 KYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLAT 387
Query: 1114 G**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
G**FMSVM TVS PEQD S +HRI *QEP PLPSL G LP + M+ KGYWLV LN
Sbjct: 386 G**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLN 216
>gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0016J13f,
mRNA sequence
Length = 656
Score = 300 bits (649), Expect = 2e-080
Identities = 117/159 (73%), Positives = 130/159 (81%)
Frame = -3 / +3
Query: 1358 WQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
W+ ARATWY GFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 180 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 359
Query: 1178 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 999
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KLRHSGIIDI+F RV
Sbjct: 360 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 539
Query: 998 PCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVD 882
PCEFPGLK+ FHVE+ SNPVYFAVLVEYEDGDGD V VD
Sbjct: 540 PCEFPGLKVTFHVEQGSNPVYFAVLVEYEDGDGDXVXVD 656
Score = 194 bits (419), Expect = 9e-049
Identities = 86/118 (72%), Positives = 91/118 (77%)
Frame = +1 / -2
Query: 931 AK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLD 1110
AK TGF+ STW RPGNSHGTL+N MSMMPE RS SLRPGLA PNAVPLRSKWYL
Sbjct: 607 AKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLA 428
Query: 1111 TG**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
TG**FMSVM TVS PEQD S +HRI *QEP PLPSL G LP + M+ KGYWLV LN
Sbjct: 427 TG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLN 254
>gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0024K16f,
mRNA sequence
Length = 677
Score = 296 bits (640), Expect = 3e-079
Identities = 116/161 (72%), Positives = 129/161 (80%)
Frame = -3 / +2
Query: 1358 WQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
W+ ARATWY GFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 194 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 373
Query: 1178 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 999
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KLRHSGIIDI+F RV
Sbjct: 374 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 553
Query: 998 PCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLM 876
PCEFPGLK+ HVE+ SNPVYF VLVEY DGD D VQVDLM
Sbjct: 554 PCEFPGLKVTXHVEQGSNPVYFXVLVEYXDGDXDXVQVDLM 676
Score = 187 bits (402), Expect = 2e-046
Identities = 84/117 (71%), Positives = 89/117 (76%)
Frame = +1 / -3
Query: 934 K*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDT 1113
K TGF+ ST RPGNSHGTL+N MSMMPE RS SLRPGLA PNAVPLRSKWYL T
Sbjct: 618 KYTGFDPCSTXKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLAT 439
Query: 1114 G**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
G**FMSVM TVS PEQD S +HRI *QEP PLPSL G LP + M+ KGYWLV LN
Sbjct: 438 G**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLN 268
Score = 74.4 bits (156), Expect(3) = 3e-022
Identities = 35/51 (68%), Positives = 37/51 (72%)
Frame = +3 / -2
Query: 933 EVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSA 1085
EV VR LLHV L+ RELARH ELDVDDAGV EL+ EAGLG AER A
Sbjct: 619 EVHRVRPLLHVXGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 467
Score = 36.3 bits (73), Expect(3) = 3e-022
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = +3 / -2
Query: 1158 GAGRXXXXXXXXXXXXXXXXXEQWLVAAGAHGHEGVLVGVLE 1283
GAG E LVAA HG EGVLVGVLE
Sbjct: 394 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 269
Score = 32.7 bits (65), Expect(3) = 3e-022
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 1061 WPACRTQCR*GRSGTW 1108
WP RT+C GRSGTW
Sbjct: 491 WPWRRTRCHSGRSGTW 444
>gb|BE454367.2|BE454367 HVSMEh0093N18f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0093N18f, mRNA sequence
Length = 870
Score = 220 bits (475), Expect(2) = 8e-079
Identities = 89/96 (92%), Positives = 92/96 (95%)
Frame = -3 / +1
Query: 1142 VIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFH 963
VIITDMNYYPV+ YHFDLSGTAFGRLAKPGLND+LRHSGIIDIEFTRVPCEFPGLKIGFH
Sbjct: 1 VIITDMNYYPVAPYHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPCEFPGLKIGFH 180
Query: 962 VEEYSNPVYFAVLVEYEDGDGDVVQVDLMESKTARG 855
VEEYSNPVYFAVLVEYEDGDGDVVQVDLMES+ G
Sbjct: 181 VEEYSNPVYFAVLVEYEDGDGDVVQVDLMESRGPGG 288
Score = 148 bits (318), Expect(2) = 1e-047
Identities = 66/95 (69%), Positives = 67/95 (70%)
Frame = +1 / -2
Query: 856 PRAVLDSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEW 1035
P DS+R AK*TGFEYSSTWNPI PGNSHGT VNSMSMMPEW
Sbjct: 287 PPGPRDSMRSTCTTSPSPSSYSTSTAK*TGFEYSSTWNPILSPGNSHGTRVNSMSMMPEW 108
Query: 1036 RSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMI 1140
RSLSL PG ASLPNAVPLRSKW TG**FMSVMI
Sbjct: 107 RSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMI 3
Score = 102 bits (217), Expect = 6e-021
Identities = 45/53 (84%), Positives = 47/53 (88%)
Frame = +3 / -1
Query: 930 REVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSAA 1088
REVDGVRVLLHVEPDL+ RELARHP ELDVDDAGVAE VVE GL +PAER AA
Sbjct: 213 REVDGVRVLLHVEPDLEPRELARHPCELDVDDAGVAEPVVEPGLCEPAERRAA 55
Score = 95.0 bits (201), Expect(2) = 8e-079
Identities = 34/65 (52%), Positives = 46/65 (70%)
Frame = -3 / +1
Query: 863 ARGPPTGRWTPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVANNVIPANWRPNTFY 684
+RGP G+WT MRESWGSVWR++ NHR+Q PF I++R++ G+TL + +P WRP T
Sbjct: 271 SRGPGGGKWTRMRESWGSVWRLNCNHRLQAPFCIQVRDKCGETLGGSMGVPGRWRPGTLC 450
Query: 683 RSFVQ 669
R Q
Sbjct: 451 RCVEQ 465
Score = 62.9 bits (131), Expect(2) = 1e-047
Identities = 31/60 (51%), Positives = 33/60 (55%)
Frame = +1 / -2
Query: 682 R*KVLGRQLAGMTLLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGVHRPVGGPR 861
R KV G Q G +L SV P R M+ G C RWL RQTEP DS I VH P GPR
Sbjct: 452 RHKVPGLQRPGTPMLPPSVSPHLSRTWMQNGACSRWLQFRRQTEPHDSLILVHFPPPGPR 273
>gb|BQ459628.1|BQ459628 HA08J01r HA Hordeum vulgare subsp. vulgare cDNA clone HA08J01
5-PRIME, mRNA sequence
Length = 470
Score = 151 bits (324), Expect(3) = 3e-078
Identities = 60/75 (80%), Positives = 65/75 (86%)
Frame = -3 / +1
Query: 863 ARGPPTGRWTPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVANNVIPANWRPNTFY 684
+RGP G+WT MRESWGSVWR+D+NHR+Q PFSIRIRNESGKTLVAN VIPANWRPNTFY
Sbjct: 220 SRGPGGGKWTRMRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPNTFY 399
Query: 683 RSFVQYS*PIGIRAL 639
RSFVQYS* R L
Sbjct: 400 RSFVQYS*SPFTRVL 444
Score = 116 bits (249), Expect(3) = 3e-078
Identities = 47/51 (92%), Positives = 48/51 (94%)
Frame = -3 / +1
Query: 1007 TRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESKTARG 855
TRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMES+ G
Sbjct: 85 TRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESRGPGG 237
Score = 112 bits (240), Expect(3) = 5e-051
Identities = 52/66 (78%), Positives = 52/66 (78%)
Frame = +1 / -1
Query: 664 LYWTKER*KVLGRQLAGMTLLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGVHR 843
LY TKER*KVLG QLAGMTLLATSVLPDSLRMRME G RWL S RQTEP DS I VH
Sbjct: 419 LYCTKER*KVLGLQLAGMTLLATSVLPDSLRMRMENGAWRRWLESRRQTEPHDSLILVHF 240
Query: 844 PVGGPR 861
P GPR
Sbjct: 239 PPPGPR 222
Score = 75.8 bits (159), Expect(3) = 1e-031
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +2 / -2
Query: 647 GSRSVSCTGRRSGRRCWGASWPG*RCWRRASCRT 748
G R SCT RRSGRRCW +SWPG* CWRRASCRT
Sbjct: 436 G*RDFSCTARRSGRRCWASSWPG*PCWRRASCRT 335
Score = 64.3 bits (134), Expect(3) = 5e-051
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = +1 / -3
Query: 1009 NSMSMMPEWRSLSLRPGLASLPNAVPLR 1092
NSMSMMPEWRSLSL PG ASLPNAVPLR
Sbjct: 84 NSMSMMPEWRSLSLSPGFASLPNAVPLR 1
Score = 64.3 bits (134), Expect(3) = 3e-078
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = -3 / +2
Query: 1091 LSGTAFGRLAKPGLNDKLRHSGIIDIE 1011
LSGTAFGRLAKPGLND+LRHSGIIDIE
Sbjct: 2 LSGTAFGRLAKPGLNDRLRHSGIIDIE 82
Score = 63.8 bits (133), Expect(3) = 5e-051
Identities = 27/51 (52%), Positives = 28/51 (54%)
Frame = +1 / -1
Query: 856 PRAVLDSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLV 1008
P DS+R AK*TGFEYSSTWNPI PGNSHGT V
Sbjct: 236 PPGPRDSMRSTCTTSPSPSSYSTSTAK*TGFEYSSTWNPILSPGNSHGTRV 84
Score = 57.9 bits (120), Expect(3) = 1e-031
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -3
Query: 930 REVDGVRVLLHVEPDLQARELARHP 1004
REVDGVRVLLHVEPDL+ RELARHP
Sbjct: 162 REVDGVRVLLHVEPDLEPRELARHP 88
Score = 46.4 bits (95), Expect(3) = 1e-031
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +3 / -2
Query: 1011 LDVDDAGVAELVVEAGLGQPAERSAA 1088
LDVDDAGVAE VVE GL +PAER AA
Sbjct: 82 LDVDDAGVAEPVVEPGLCEPAERCAA 5
>gb|CK124171.1|CK124171 BES1824107e17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010E177 5-PRIME, mRNA sequence
Length = 751
Score = 151 bits (324), Expect(3) = 2e-076
Identities = 60/75 (80%), Positives = 65/75 (86%)
Frame = -3 / +1
Query: 863 ARGPPTGRWTPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVANNVIPANWRPNTFY 684
+RGP G+WT MRESWGSVWR+D+NHR+Q PFSIRIRNESGKTLVAN VIPANWRPNTFY
Sbjct: 151 SRGPGGGKWTRMRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPNTFY 330
Query: 683 RSFVQYS*PIGIRAL 639
RSFVQYS* R L
Sbjct: 331 RSFVQYS*SPFTRVL 375
Score = 128 bits (274), Expect(3) = 2e-076
Identities = 52/56 (92%), Positives = 53/56 (94%)
Frame = -3 / +1
Query: 1022 IDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESKTARG 855
IDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMES+ G
Sbjct: 1 IDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESRGPGG 168
Score = 112 bits (240), Expect(4) = 8e-048
Identities = 52/66 (78%), Positives = 52/66 (78%)
Frame = +1 / -3
Query: 664 LYWTKER*KVLGRQLAGMTLLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGVHR 843
LY TKER*KVLG QLAGMTLLATSVLPDSLRMRME G RWL S RQTEP DS I VH
Sbjct: 350 LYCTKER*KVLGLQLAGMTLLATSVLPDSLRMRMENGAWRRWLESRRQTEPHDSLILVHF 171
Query: 844 PVGGPR 861
P GPR
Sbjct: 170 PPPGPR 153
Score = 75.8 bits (159), Expect(3) = 3e-033
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +2 / -1
Query: 647 GSRSVSCTGRRSGRRCWGASWPG*RCWRRASCRT 748
G R SCT RRSGRRCW +SWPG* CWRRASCRT
Sbjct: 367 G*RDFSCTARRSGRRCWASSWPG*PCWRRASCRT 266
Score = 72.5 bits (152), Expect(4) = 8e-048
Identities = 31/55 (56%), Positives = 32/55 (58%)
Frame = +1 / -3
Query: 856 PRAVLDSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMS 1020
P DS+R AK*TGFEYSSTWNPI PGNSHGT VNSMS
Sbjct: 167 PPGPRDSMRSTCTTSPSPSSYSTSTAK*TGFEYSSTWNPILSPGNSHGTRVNSMS 3
Score = 68.0 bits (142), Expect(3) = 3e-033
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = +3 / -2
Query: 930 REVDGVRVLLHVEPDLQARELARHPGELDVD 1022
REVDGVRVLLHVEPDL+ RELARHP ELDVD
Sbjct: 93 REVDGVRVLLHVEPDLEPRELARHPCELDVD 1
Score = 52.8 bits (109), Expect(3) = 2e-076
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = -3 / +2
Query: 293 KAVWENGGGRRTSYALPPTVAF 228
+AVWENGGGRRT YALPPT+AF
Sbjct: 608 RAVWENGGGRRTRYALPPTLAF 673
Score = 47.8 bits (98), Expect(4) = 8e-048
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1 / -2
Query: 229 KATVGGRA*LVRLPPPFSHTAL 294
KA VGGRA LVRLPPPFSHTAL
Sbjct: 672 KARVGGRAYLVRLPPPFSHTAL 607
Score = 43.2 bits (88), Expect(3) = 3e-033
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +3 / -1
Query: 228 KSNSGRESVACTPASSIFPH 287
K SGRESV+CTP SSIFPH
Sbjct: 673 KGESGRESVSCTPXSSIFPH 614
Score = 22.1 bits (42), Expect(4) = 8e-048
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = +2 / -1
Query: 389 PKKRAPDATTPRTMITIQLQRHGDRRHLPSQ 481
P+ + DA P T R R H P+Q
Sbjct: 562 PRPNSTDAPAPAPNQTFFSPRKTHRHHTPTQ 470
>gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0019F12f,
mRNA sequence
Length = 669
Score = 239 bits (517), Expect(2) = 8e-076
Identities = 92/128 (71%), Positives = 103/128 (80%)
Frame = -3 / +2
Query: 1358 WQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
W+ ARATWY GFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 194 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 373
Query: 1178 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 999
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KLRHSGIIDI+F RV
Sbjct: 374 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 553
Query: 998 PCEFPGLK 975
PCEFPGLK
Sbjct: 554 PCEFPGLK 577
Score = 177 bits (382), Expect = 1e-043
Identities = 78/102 (76%), Positives = 82/102 (80%)
Frame = +1 / -1
Query: 979 RPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRP 1158
RPGNSHGTL+N MSMMPE RS SLRPGLA PNAVPLRSKWYL TG**FMSVM TVS P
Sbjct: 573 RPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLP 394
Query: 1159 EQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
EQD S +HRI *QEP PLPSL G LP + M+ KGYWLV LN
Sbjct: 393 EQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLN 268
Score = 65.7 bits (137), Expect(2) = 8e-076
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -3 / +1
Query: 986 PGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVD 882
P ++ FHVE+ SNPVYFAVLVEY+DGDG VVQVD
Sbjct: 565 PWSQVTFHVEQGSNPVYFAVLVEYQDGDGHVVQVD 669
>gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09C23
5-PRIME, mRNA sequence
Length = 653
Score = 283 bits (613), Expect = 1e-075
Identities = 110/150 (73%), Positives = 123/150 (82%)
Frame = -3 / +1
Query: 1358 WQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
W+ ARATWY GFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 202 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 381
Query: 1178 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 999
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KLRHSGIIDI+F RV
Sbjct: 382 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 561
Query: 998 PCEFPGLKIGFHVEEYSNPVYFAVLVEYED 909
PCEFPGLK+ FHVE+ SNPVYFAVLVEYED
Sbjct: 562 PCEFPGLKVTFHVEQGSNPVYFAVLVEYED 651
Score = 194 bits (419), Expect = 9e-049
Identities = 86/118 (72%), Positives = 91/118 (77%)
Frame = +1 / -1
Query: 931 AK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLD 1110
AK TGF+ STW RPGNSHGTL+N MSMMPE RS SLRPGLA PNAVPLRSKWYL
Sbjct: 629 AKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLA 450
Query: 1111 TG**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
TG**FMSVM TVS PEQD S +HRI *QEP PLPSL G LP + M+ KGYWLV LN
Sbjct: 449 TG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLN 276
Score = 77.1 bits (162), Expect(3) = 5e-023
Identities = 36/51 (70%), Positives = 38/51 (74%)
Frame = +3 / -3
Query: 933 EVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSA 1085
EV VR LLHVE L+ RELARH ELDVDDAGV EL+ EAGLG AER A
Sbjct: 627 EVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 475
Score = 36.3 bits (73), Expect(3) = 5e-023
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = +3 / -3
Query: 1158 GAGRXXXXXXXXXXXXXXXXXEQWLVAAGAHGHEGVLVGVLE 1283
GAG E LVAA HG EGVLVGVLE
Sbjct: 402 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 277
Score = 32.7 bits (65), Expect(3) = 5e-023
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -2
Query: 1061 WPACRTQCR*GRSGTW 1108
WP RT+C GRSGTW
Sbjct: 499 WPWRRTRCHSGRSGTW 452
>gb|BQ759881.1|BQ759881 EBpi05_SQ004_P16_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_P16 5', mRNA sequence
Length = 500
Score = 171 bits (369), Expect(2) = 1e-074
Identities = 68/85 (80%), Positives = 76/85 (89%)
Frame = -3 / +2
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVL 924
YHFDLSGTAFG +AKPGL++KLRHSGIIDI+F RVPCEFPGLK+ FHVE+ SNPVYFAVL
Sbjct: 2 YHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRVPCEFPGLKVTFHVEQGSNPVYFAVL 181
Query: 923 VEYEDGDGDVVQVDLMESKTARGPP 849
VEYEDGDGDVVQVDLME+ + P
Sbjct: 182 VEYEDGDGDVVQVDLMEANSGTWTP 256
Score = 129 bits (277), Expect(2) = 1e-074
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = -3 / +2
Query: 848 TGRWTPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVANNVIPANWRPNTFYRSFVQ 669
+G WTPMRESWGS+WR+D+ HR+Q PFS+RI NESGKTLVA+ VIPANW P+TFYRS VQ
Sbjct: 239 SGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRSIVQ 418
Query: 668 YS* 660
YS*
Sbjct: 419 YS* 427
Score = 108 bits (231), Expect(2) = 8e-049
Identities = 47/79 (59%), Positives = 50/79 (63%)
Frame = +1 / -3
Query: 868 LDSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLS 1047
L S+R AK TGF+ STW RPGNSHGTL+N MSMMPE RS S
Sbjct: 237 LASMRSTCTTSPSPSSYSTSTAKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFS 58
Query: 1048 LRPGLASLPNAVPLRSKWY 1104
LRPGLA PNAVPLRSKWY
Sbjct: 57 LRPGLAMAPNAVPLRSKWY 1
Score = 106 bits (226), Expect(2) = 8e-049
Identities = 47/61 (77%), Positives = 48/61 (78%)
Frame = +1 / -3
Query: 664 LYWTKER*KVLGRQLAGMTLLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGVHR 843
LYWT ER*KVLG QLAGMTL ATSVLPDSL MRMEKG RW S RQ +P DSRIGVH
Sbjct: 423 LYWTMER*KVLGAQLAGMTLSATSVLPDSLVMRMEKGAWRRWPESSRQIDPHDSRIGVHV 244
Query: 844 P 846
P
Sbjct: 243 P 241
Score = 77.1 bits (162), Expect(2) = 1e-024
Identities = 36/51 (70%), Positives = 38/51 (74%)
Frame = +3 / -2
Query: 933 EVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSA 1085
EV VR LLHVE L+ RELARH ELDVDDAGV EL+ EAGLG AER A
Sbjct: 172 EVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 20
Score = 59.7 bits (124), Expect(2) = 1e-024
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = +3 / -2
Query: 666 VLDXXXXXXXXXXXXRDDVVGDERLAGLVADADGEGRLHAVVGVHAPD 809
VLD RDD+VG +RLAGLV DA GEGRL AV GV PD
Sbjct: 421 VLDDGAVEGAGRPVGRDDLVGHQRLAGLVGDAHGEGRLEAVAGVQPPD 278
>gb|BI957582.1|BI957582 HVSMEn0010D14f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0010D14f,
mRNA sequence
Length = 628
Score = 258 bits (558), Expect(2) = 1e-074
Identities = 100/108 (92%), Positives = 103/108 (95%)
Frame = -3 / +1
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FKHTNQYPF SM SCGNQPLFKDGKGCGSCYKIRCRKD SCSGRTETVIITDMNYYPV+
Sbjct: 289 FKHTNQYPFASMTSCGNQPLFKDGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAP 468
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHV 960
YHFDL+GTAFGRLAKP LND+LRHSGIIDIEFTRVPCEFPGLKIGFHV
Sbjct: 469 YHFDLTGTAFGRLAKPRLNDRLRHSGIIDIEFTRVPCEFPGLKIGFHV 612
Score = 211 bits (455), Expect(2) = 6e-055
Identities = 89/107 (83%), Positives = 90/107 (84%)
Frame = +1 / -3
Query: 961 TWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMI 1140
TWNPI PGNSHGT VNSMSMMPEWRSLSL G ASLPNAVP+RSKW TG**FMSVMI
Sbjct: 611 TWNPILSPGNSHGTRVNSMSMMPEWRSLSLSRGFASLPNAVPVRSKW*GATG**FMSVMI 432
Query: 1141 TVSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCL 1281
TVSV PEQD SFLH IL* EP PLPSLNNGWLPQE MD GYWLVCL
Sbjct: 431 TVSVLPEQDWSFLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCL 291
Score = 114 bits (244), Expect(2) = 8e-030
Identities = 47/70 (67%), Positives = 52/70 (74%)
Frame = -2 / +3
Query: 1284 IQAHQPVPLHVHGLLRQPAIVXXXXXXXXXXQDSVQEGPVLLRADGDGDHHRHELLPGVQ 1105
+QAHQPVP+ VH LLRQPAIV QD +QEGP+LLR DGDGDHHRHELLPG
Sbjct: 288 LQAHQPVPVRVHDLLRQPAIVQGRQGMRLMLQDQMQEGPILLRQDGDGDHHRHELLPGGA 467
Query: 1104 VPLRPQRHCV 1075
+PLRP RH V
Sbjct: 468 LPLRPDRHGV 497
Score = 73.9 bits (155), Expect(3) = 5e-023
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +3 / -2
Query: 960 HVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSA 1085
+VEPDL+ RE ARHP ELDVDDAGVAE VVE GL +PAER A
Sbjct: 612 NVEPDLEPREFARHPCELDVDDAGVAEPVVEPGLCEPAERRA 487
Score = 45.1 bits (92), Expect(3) = 5e-023
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3 / -2
Query: 1221 EQWLVAAGAHGHEGVLVGVLES 1286
EQWLVAAG HG E VLVGVLE+
Sbjct: 351 EQWLVAAGGHGRERVLVGVLEA 286
Score = 42.8 bits (87), Expect(2) = 1e-074
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -3 / +1
Query: 1406 GTENYTASDAAVYWGPWQRARATWY 1332
G + +DA YWGPW ARATWY
Sbjct: 166 GDVDLNVTDATKYWGPWTPARATWY 240
Score = 36.8 bits (74), Expect(2) = 8e-030
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -2 / +3
Query: 1011 VHQGAVRVPGPEDRVPR 961
VH GAVR+PG +DRVPR
Sbjct: 561 VHTGAVRIPGAQDRVPR 611
Score = 27.2 bits (53), Expect(3) = 5e-023
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -1
Query: 1067 ACRTQCR*GRSG 1102
ACRT CR GRSG
Sbjct: 505 ACRTPCRSGRSG 470
Score = 24.4 bits (47), Expect(2) = 6e-055
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / -3
Query: 1333 YQVARALCQGPQY 1371
YQVA A QGPQY
Sbjct: 239 YQVALAGVQGPQY 201
>gb|BG310251.1|BG310251 HVSMEc0016K12f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0016K12f, mRNA sequence
Length = 787
Score = 253 bits (547), Expect(2) = 3e-074
Identities = 99/106 (93%), Positives = 101/106 (95%)
Frame = -3 / +2
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FKHTNQYPF SM SCGNQPLFKDGKGCGSCYKIRCRKD SCSGRTETVIITDMNYYPV+
Sbjct: 275 FKHTNQYPFASMTSCGNQPLFKDGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAP 454
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGF 966
YHFDLSGTAFGRLAKPGLND+LRHSGIIDIEFTRVPCEF GLKIGF
Sbjct: 455 YHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPCEFLGLKIGF 592
Score = 204 bits (441), Expect(2) = 5e-053
Identities = 88/106 (83%), Positives = 88/106 (83%)
Frame = +1 / -2
Query: 964 WNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMIT 1143
WNPI P NSHGT VNSMSMMPE RSLSL PG ASLPNAVPLRSKW TG**FMSVMIT
Sbjct: 594 WNPILSPRNSHGTRVNSMSMMPECRSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMIT 415
Query: 1144 VSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCL 1281
VSV PEQD SFLH IL* EP PLPSLNNGWLPQE MD GYWLVCL
Sbjct: 414 VSVLPEQDWSFLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCL 277
Score = 116 bits (249), Expect(2) = 8e-030
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2 / +1
Query: 1284 IQAHQPVPLHVHGLLRQPAIVXXXXXXXXXXQDSVQEGPVLLRADGDGDHHRHELLPGVQ 1105
+QAHQPVP+ VH LLRQPAIV QD +QEGP+LLR DGDGDHHRHELLPG
Sbjct: 274 LQAHQPVPVRVHDLLRQPAIVQGRQGMRLMLQDQMQEGPILLRQDGDGDHHRHELLPGGA 453
Query: 1104 VPLRPQRHCV 1075
+PLRPQRH V
Sbjct: 454 LPLRPQRHGV 483
Score = 46.9 bits (96), Expect(2) = 3e-074
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3 / +2
Query: 1430 LDAADAGTGTENYTASDAAVYWGPWQRARATWY 1332
L+A DA + +DA YWGPW ARATWY
Sbjct: 128 LNATDASPFDVDLNVTDATKYWGPWTPARATWY 226
Score = 34.5 bits (69), Expect(2) = 8e-030
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2 / +1
Query: 1011 VHQGAVRVPGPEDRVP 964
+H GAVRVPG +DRVP
Sbjct: 547 IHTGAVRVPGAQDRVP 594
Score = 24.4 bits (47), Expect(2) = 5e-053
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / -2
Query: 1333 YQVARALCQGPQY 1371
YQVA A QGPQY
Sbjct: 225 YQVALAGVQGPQY 187
>gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0020N13f,
mRNA sequence
Length = 630
Score = 275 bits (595), Expect = 5e-073
Identities = 107/147 (72%), Positives = 120/147 (81%)
Frame = -3 / +3
Query: 1358 WQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
W+ ARATWY GFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 189 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 368
Query: 1178 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 999
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KLRHSGIIDI+F RV
Sbjct: 369 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 548
Query: 998 PCEFPGLKIGFHVEEYSNPVYFAVLVE 918
PCEFPGLK+ FHVE+ SNPVYFAVLVE
Sbjct: 549 PCEFPGLKVTFHVEQGSNPVYFAVLVE 629
Score = 194 bits (419), Expect = 9e-049
Identities = 86/118 (72%), Positives = 91/118 (77%)
Frame = +1 / -3
Query: 931 AK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLD 1110
AK TGF+ STW RPGNSHGTL+N MSMMPE RS SLRPGLA PNAVPLRSKWYL
Sbjct: 616 AKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLA 437
Query: 1111 TG**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
TG**FMSVM TVS PEQD S +HRI *QEP PLPSL G LP + M+ KGYWLV LN
Sbjct: 436 TG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLN 263
Score = 75.3 bits (158), Expect(3) = 2e-022
Identities = 35/51 (68%), Positives = 38/51 (74%)
Frame = +3 / -2
Query: 933 EVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSA 1085
+V VR LLHVE L+ RELARH ELDVDDAGV EL+ EAGLG AER A
Sbjct: 614 KVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 462
Score = 36.3 bits (73), Expect(3) = 2e-022
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = +3 / -2
Query: 1158 GAGRXXXXXXXXXXXXXXXXXEQWLVAAGAHGHEGVLVGVLE 1283
GAG E LVAA HG EGVLVGVLE
Sbjct: 389 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 264
Score = 32.7 bits (65), Expect(3) = 2e-022
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 1061 WPACRTQCR*GRSGTW 1108
WP RT+C GRSGTW
Sbjct: 486 WPWRRTRCHSGRSGTW 439
>gb|BF256653.2|BF256653 HVSMEf0010J19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0010J19f, mRNA sequence
Length = 841
Score = 270 bits (583), Expect(2) = 3e-072
Identities = 105/144 (72%), Positives = 122/144 (84%)
Frame = -3 / +2
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FK+ N+YPFM+M SCGNQPLFKDGKGCG+CYKI+C K +CSGR ETV+ITDMNYYPV+
Sbjct: 359 FKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNYYPVAP 538
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVL 924
YHFDLSGTAFG+LAKPG ND+LRH+GIIDI+FTRV CEFPGLK+GFHVEE SN VY A+
Sbjct: 539 YHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAVYMAIP 718
Query: 923 VEYEDGDGDVVQVDLMESKTARGP 852
VE E+ DGD+VQVD + A P
Sbjct: 719 VEVENRDGDLVQVDPHGVRPATAP 790
Score = 182 bits (392), Expect = 5e-045
Identities = 82/115 (71%), Positives = 86/115 (74%)
Frame = +1 / -2
Query: 940 TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG* 1119
T + SSTWNP F PGNSH TLVN MSMMP RS SLRPGLASLP AVPLRSKW TG*
Sbjct: 702 TALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG* 523
Query: 1120 *FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
*FMSV+ITVS RPE F+H IL* PQPLPSLN+GWLPQE M M GY LN
Sbjct: 522 *FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLN 358
Score = 87.7 bits (185), Expect(2) = 3e-022
Identities = 38/68 (55%), Positives = 43/68 (63%)
Frame = -2 / +1
Query: 1284 IQAHQPVPLHVHGLLRQPAIVXXXXXXXXXXQDSVQEGPVLLRADGDGDHHRHELLPGVQ 1105
+Q +PVP+H H LLRQPA V QD V E +LRA GDGD H HELLPG
Sbjct: 358 VQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQGVLRAAGDGDDHGHELLPGGA 537
Query: 1104 VPLRPQRH 1081
+PLRPQRH
Sbjct: 538 LPLRPQRH 561
Score = 38.6 bits (78), Expect(2) = 3e-022
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2 / +1
Query: 1011 VHQGAVRVPGPEDRVPRGG 955
VHQG VRVPG E VPRGG
Sbjct: 631 VHQGGVRVPGAEGGVPRGG 687
Score = 23.5 bits (45), Expect(2) = 3e-072
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3 / +1
Query: 857 GPPTGRWTPMRESWGSV 807
GP GRWT + + GS+
Sbjct: 784 GPGCGRWTRIPQIGGSI 834
>gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0020K03f,
mRNA sequence
Length = 679
Score = 267 bits (578), Expect = 1e-070
Identities = 104/151 (68%), Positives = 119/151 (78%)
Frame = -3 / +2
Query: 1364 GPWQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKI 1185
G W+ ARATWY GFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+I
Sbjct: 182 GGWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQI 361
Query: 1184 RCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFT 1005
RC D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KL HSGIIDI+F
Sbjct: 362 RCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLPHSGIIDIQFK 541
Query: 1004 RVPCEFPGLKIGFHVEEYSNPVYFAVLVEYE 912
RVPCEFPGLK+ FHVE+ SNPVYF LV ++
Sbjct: 542 RVPCEFPGLKVTFHVEQGSNPVYFPRLVGFQ 634
Score = 180 bits (387), Expect = 2e-044
Identities = 82/117 (70%), Positives = 87/117 (74%)
Frame = +1 / -2
Query: 934 K*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDT 1113
K TG + ST RPGNSHGTL+N MSMMPE S SLRPGLA PNAVPLRSKWYL T
Sbjct: 612 KYTGLDPCST*KVTLRPGNSHGTLLNWMSMMPECGSFSLRPGLAMAPNAVPLRSKWYLAT 433
Query: 1114 G**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
G**FMSVM TVS PEQD S +HRI *QEP PLPSL G LP + M+ KGYWLV LN
Sbjct: 432 G**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLN 262
>gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024E17f, mRNA sequence
Length = 875
Score = 239 bits (517), Expect(2) = 1e-070
Identities = 92/128 (71%), Positives = 103/128 (80%)
Frame = -3 / +3
Query: 1358 WQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
W+ ARATWY GFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 180 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 359
Query: 1178 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 999
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KLRHSGIIDI+F RV
Sbjct: 360 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 539
Query: 998 PCEFPGLK 975
PCEFPGLK
Sbjct: 540 PCEFPGLK 563
Score = 175 bits (377), Expect = 5e-043
Identities = 77/101 (76%), Positives = 81/101 (80%)
Frame = +1 / -2
Query: 982 PGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPE 1161
PGNSHGTL+N MSMMPE RS SLRPGLA PNAVPLRSKWYL TG**FMSVM TVS PE
Sbjct: 556 PGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPE 377
Query: 1162 QDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
QD S +HRI *QEP PLPSL G LP + M+ KGYWLV LN
Sbjct: 376 QDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLN 254
Score = 48.7 bits (100), Expect(2) = 1e-070
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = -3 / +2
Query: 986 PGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVD 882
P ++ HVE+ NPVYF VLVEYED D +V VD
Sbjct: 551 PWAQVXLHVEQGYNPVYFTVLVEYEDRDRYLVHVD 655
>gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL105f8 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 702
Score = 183 bits (395), Expect(3) = 5e-070
Identities = 71/101 (70%), Positives = 88/101 (87%)
Frame = -3 / +3
Query: 1169 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCE 990
P+CSG +TVIITDMNY PVS+YHFDLSGTAFG +AK G ND+LRH+GII+++F RVPC+
Sbjct: 315 PACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQ 494
Query: 989 FPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESK 867
+PGL + FHVEE SNP Y A+LVEYE+GDGDV Q+D+MES+
Sbjct: 495 YPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESR 617
Score = 111 bits (238), Expect(2) = 3e-035
Identities = 54/100 (54%), Positives = 58/100 (58%)
Frame = +1 / -3
Query: 871 DSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSL 1050
DSI A * GF+ SSTWN PG HGTL+N M +MP WRS SL
Sbjct: 613 DSIMSSCFTSPSPFSYSTRIAM*NGFDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSL 434
Query: 1051 RPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 1170
RP LA P AVPLRSKW +TG *FMSVMITV PE G
Sbjct: 433 RPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHAG 314
Score = 76.7 bits (161), Expect(3) = 5e-070
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -3 / +3
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
FK+ N PF SM SCGNQPLFKDGKGCGSCY+IRC
Sbjct: 195 FKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 299
Score = 57.9 bits (120), Expect(2) = 3e-035
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +1 / -3
Query: 1174 FLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
F H I *QEPQPLPSL +GWLPQE M+ KG L LN
Sbjct: 304 FKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLN 194
Score = 44.6 bits (91), Expect(3) = 5e-070
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -3 / +3
Query: 851 PTGRWTPMRESWGSVWRM 798
PTG+W PM+ESW S+WRM
Sbjct: 648 PTGQWVPMKESWXSIWRM 701
>gb|BF618493.2|BF618493 HVSMEc0005N13f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0005N13f, mRNA sequence
Length = 798
Score = 215 bits (464), Expect(3) = 2e-069
Identities = 84/101 (83%), Positives = 88/101 (87%)
Frame = -3 / +2
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FKHTNQYPF SM SCGNQPLFKDGKGCGSCYKIRCRKD SCSGRTET IITDMNYYP +
Sbjct: 278 FKHTNQYPFASMTSCGNQPLFKDGKGCGSCYKIRCRKDQSCSGRTETGIITDMNYYPGAP 457
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPG 981
YH+DL+GTAFG+L KPGLNDKLRHSGIIDIEFT PG
Sbjct: 458 YHYDLNGTAFGKLPKPGLNDKLRHSGIIDIEFTPEAVPIPG 580
Score = 174 bits (375), Expect(3) = 3e-050
Identities = 77/100 (77%), Positives = 78/100 (78%)
Frame = +1 / -1
Query: 982 PGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPE 1161
PG + VNSMSMMPEWRSLSL PG SLPNAVPLRS W G**FMSVMI VSV PE
Sbjct: 579 PGIGTASGVNSMSMMPEWRSLSLSPGFGSLPNAVPLRS*W*GAPG**FMSVMIPVSVLPE 400
Query: 1162 QDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCL 1281
QD SFLH IL* EP PLPSLNNGWLPQE MD GYWLVCL
Sbjct: 399 QDWSFLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCL 280
Score = 109 bits (233), Expect(2) = 4e-024
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = -2 / +1
Query: 1284 IQAHQPVPLHVHGLLRQPAIVXXXXXXXXXXQDSVQEGPVLLRADGDGDHHRHELLPGVQ 1105
+QAHQPVP+ VH LLRQPAIV QD +QEGP+LLR DGDGDHHRHELLPG
Sbjct: 277 LQAHQPVPVRVHDLLRQPAIVQGRQGMRLMLQDQMQEGPILLRQDGDGDHHRHELLPGGA 456
Query: 1104 VPLRPQRHCV 1075
+PL PQR+ V
Sbjct: 457 LPL*PQRNGV 486
Score = 46.9 bits (96), Expect(3) = 2e-069
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3 / +2
Query: 1430 LDAADAGTGTENYTASDAAVYWGPWQRARATWY 1332
L+A DA + +DA YWGPW ARATWY
Sbjct: 131 LNATDASPFDVDLNVTDATKYWGPWTPARATWY 229
Score = 40.9 bits (83), Expect(3) = 2e-069
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -3 / +3
Query: 1004 RVPCEFPGLKIGFHVEEYSNP 942
R PC+FPGLKI H++EY NP
Sbjct: 558 RRPCQFPGLKIRIHMKEYLNP 620
Score = 39.1 bits (79), Expect(3) = 3e-050
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3 / -2
Query: 942 GVRVLLHVEPDLQARELARHP 1004
GV+VL HV+PDL+ RELAR P
Sbjct: 620 GVQVLFHVDPDLEPRELARPP 558
Score = 24.4 bits (47), Expect(3) = 3e-050
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / -1
Query: 1333 YQVARALCQGPQY 1371
YQVA A QGPQY
Sbjct: 228 YQVALAGVQGPQY 190
Score = 22.6 bits (43), Expect(2) = 4e-024
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2 / +2
Query: 999 AVRVPGPEDRVPRGGVLE 946
AV +PG +D+ P VLE
Sbjct: 563 AVPIPGAQDQDPHERVLE 616
>gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0020P05f,
mRNA sequence
Length = 615
Score = 263 bits (569), Expect = 2e-069
Identities = 102/144 (70%), Positives = 114/144 (79%)
Frame = -3 / +3
Query: 1358 WQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
W+ ARATWY GF +TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 183 WEDARATWYGAPTGAGPMDDGGACGFNNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 362
Query: 1178 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 999
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KLRHSGIIDI+F RV
Sbjct: 363 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 542
Query: 998 PCEFPGLKIGFHVEEYSNPVYFAV 927
PCEFPGL + FHVE SNPVYFAV
Sbjct: 543 PCEFPGLNVTFHVEXGSNPVYFAV 614
Score = 195 bits (420), Expect = 6e-049
Identities = 86/118 (72%), Positives = 91/118 (77%)
Frame = +1 / -3
Query: 931 AK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLD 1110
AK TGF+ STW RPGNSHGTL+N MSMMPE RS SLRPGLA PNAVPLRSKWYL
Sbjct: 610 AKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLA 431
Query: 1111 TG**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
TG**FMSVM TVS PEQD S +HRI *QEP PLPSL G LP + M+ KGYWLV LN
Sbjct: 430 TG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVLLN 257
Score = 73.5 bits (154), Expect(3) = 1e-021
Identities = 34/51 (66%), Positives = 37/51 (72%)
Frame = +3 / -2
Query: 933 EVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSA 1085
EV VR LHVE ++ RELARH ELDVDDAGV EL+ EAGLG AER A
Sbjct: 608 EVHRVRPXLHVEGHVETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 456
Score = 35.4 bits (71), Expect(3) = 1e-021
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3 / -2
Query: 1158 GAGRXXXXXXXXXXXXXXXXXEQWLVAAGAHGHEGVLVGVLE 1283
GAG E LVAA HG EGVLVGV+E
Sbjct: 383 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVIE 258
Score = 32.7 bits (65), Expect(3) = 1e-021
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 1061 WPACRTQCR*GRSGTW 1108
WP RT+C GRSGTW
Sbjct: 480 WPWRRTRCHSGRSGTW 433
>gb|CB882163.1|CB882163 HL01B01w HL Hordeum vulgare subsp. vulgare cDNA clone HL01B01
3-PRIME, mRNA sequence
Length = 574
Score = 235 bits (508), Expect(2) = 6e-069
Identities = 91/97 (93%), Positives = 93/97 (95%)
Frame = -3 / +1
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FKHTNQYPF SM SCGNQPLFKDGKGCGSCYKIRCRKD SCSGRTETVIITDMNYYPV+
Sbjct: 283 FKHTNQYPFASMTSCGNQPLFKDGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAP 462
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPC 993
YHFDLSGTAFGRLAKPGLND+LRHSGIIDIEFTRVPC
Sbjct: 463 YHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPC 573
Score = 191 bits (412), Expect(2) = 5e-049
Identities = 82/96 (85%), Positives = 82/96 (85%)
Frame = +1 / -3
Query: 994 HGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGS 1173
HGT VNSMSMMPEWRSLSL PG ASLPNAVPLRSKW TG**FMSVMITVSV PEQD S
Sbjct: 572 HGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMITVSVLPEQDWS 393
Query: 1174 FLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCL 1281
FLH IL* EP PLPSLNNGWLPQE MD GYWLVCL
Sbjct: 392 FLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCL 285
Score = 117 bits (251), Expect = 1e-025
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = -2 / +3
Query: 1284 IQAHQPVPLHVHGLLRQPAIVXXXXXXXXXXQDSVQEGPVLLRADGDGDHHRHELLPGVQ 1105
+QAHQPVP+ VH LLRQPAIV QD +QEGP+LLR DGDGDHHRHELLPG
Sbjct: 282 LQAHQPVPVRVHDLLRQPAIVQGRQGMRLMLQDQMQEGPILLRQDGDGDHHRHELLPGGA 461
Query: 1104 VPLRPQRHCV 1075
+PLRPQRH V
Sbjct: 462 LPLRPQRHSV 491
Score = 46.9 bits (96), Expect(2) = 6e-069
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -3 / +1
Query: 1430 LDAADAGTGTENYTASDAAVYWGPWQRARATWY 1332
L+A DA + +DA YWGPW ARATWY
Sbjct: 136 LNATDASPFDVDLNVTDATKYWGPWTPARATWY 234
Score = 24.4 bits (47), Expect(2) = 5e-049
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / -3
Query: 1333 YQVARALCQGPQY 1371
YQVA A QGPQY
Sbjct: 233 YQVALAGVQGPQY 195
>gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL87h3 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 701
Score = 180 bits (388), Expect(3) = 1e-068
Identities = 70/101 (69%), Positives = 87/101 (86%)
Frame = -3 / +3
Query: 1169 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCE 990
P+CSG +TVIITDMNY PVS+YHFDLSGTAFG +AK G ND+LRH+GII+++F RVPC+
Sbjct: 321 PACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQ 500
Query: 989 FPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESK 867
+P L + FHVEE SNP Y A+LVEYE+GDGDV Q+D+MES+
Sbjct: 501 YPXLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESR 623
Score = 107 bits (229), Expect(3) = 3e-036
Identities = 53/100 (53%), Positives = 57/100 (57%)
Frame = +1 / -2
Query: 871 DSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSL 1050
DSI A * GF+ SSTWN G HGTL+N M +MP WRS SL
Sbjct: 619 DSIMSSCFTSPSPFSYSTRIAM*NGFDPSSTWNVTVNXGYWHGTLLNCMLIMPAWRSSSL 440
Query: 1051 RPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 1170
RP LA P AVPLRSKW +TG *FMSVMITV PE G
Sbjct: 439 RPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHAG 320
Score = 76.7 bits (161), Expect(3) = 1e-068
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -3 / +3
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
FK+ N PF SM SCGNQPLFKDGKGCGSCY+IRC
Sbjct: 201 FKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 305
Score = 57.9 bits (120), Expect(3) = 3e-036
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +1 / -2
Query: 1174 FLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
F H I *QEPQPLPSL +GWLPQE M+ KG L LN
Sbjct: 310 FKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLN 200
Score = 43.2 bits (88), Expect(3) = 1e-068
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -3 / +3
Query: 851 PTGRWTPMRESWGSVW 804
PTG+W PM+ESWGS+W
Sbjct: 654 PTGQWVPMKESWGSIW 701
Score = 25.4 bits (49), Expect(3) = 3e-036
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1 / -2
Query: 805 QTEPQDSRIGVHRPVG 852
Q +P DS +G H PVG
Sbjct: 700 QIDPHDSFMGTHCPVG 653
>gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0021G03f,
mRNA sequence
Length = 682
Score = 239 bits (517), Expect(2) = 8e-068
Identities = 92/128 (71%), Positives = 103/128 (80%)
Frame = -3 / +3
Query: 1358 WQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
W+ ARATWY GFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 171 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 350
Query: 1178 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 999
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KLRHSGIIDI+F RV
Sbjct: 351 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 530
Query: 998 PCEFPGLK 975
PCEFPGLK
Sbjct: 531 PCEFPGLK 554
Score = 180 bits (388), Expect = 2e-044
Identities = 79/103 (76%), Positives = 83/103 (80%)
Frame = +1 / -1
Query: 976 FRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVR 1155
FRPGNSHGTL+N MSMMPE RS SLRPGLA PNAVPLRSKWYL TG**FMSVM TVS
Sbjct: 553 FRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGL 374
Query: 1156 PEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
PEQD S +HRI *QEP PLPSL G LP + M+ KGYWLV LN
Sbjct: 373 PEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLN 245
Score = 39.1 bits (79), Expect(2) = 8e-068
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3 / +2
Query: 986 PGLKIGFHVEEYSNPVYFAVLVE 918
P K+ FHVE+ SNPVYFAVL E
Sbjct: 542 PWSKVTFHVEQGSNPVYFAVLGE 610
>gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0002I16f, mRNA sequence
Length = 851
Score = 187 bits (403), Expect(4) = 6e-066
Identities = 73/116 (62%), Positives = 91/116 (78%)
Frame = -3 / +2
Query: 1169 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCE 990
P+CSG ETVIITDMNYYPVS++HFDLSGTAFG +AK G N++LRH+GIID++F RVPC+
Sbjct: 233 PACSGVPETVIITDMNYYPVSRFHFDLSGTAFGAMAKDGRNEELRHAGIIDMQFRRVPCQ 412
Query: 989 FPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESKTARGPPTGRWTPMRE 822
+PGL + FHV+ SNP Y A+LVEYE+GDGDV QVD+M+S+ G P E
Sbjct: 413 YPGLTVTFHVQHGSNPYYLAILVEYENGDGDVDQVDMMQSRPDAAAGEGGMAPTGE 580
Score = 116 bits (247), Expect(4) = 2e-039
Identities = 43/68 (63%), Positives = 49/68 (72%)
Frame = -3 / +2
Query: 851 PTGRWTPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVANNVIPANWRPNTFYRSFV 672
PTG W PM ESWGS+WRMDT MQ PFS+RI NESGKTLVA+ V P +W PN Y SF+
Sbjct: 569 PTGEWVPMTESWGSIWRMDTRRPMQGPFSLRITNESGKTLVADQVNPGDWEPNEIYSSFI 748
Query: 671 QYS*PIGI 648
Q *P +
Sbjct: 749 QVD*PFSL 772
Score = 112 bits (239), Expect(3) = 5e-043
Identities = 58/116 (50%), Positives = 62/116 (53%)
Frame = +1 / -3
Query: 823 SRIGVHRPVGGPRAVLDSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGT 1002
S +G P + D I A+* G E TWN PG HGT
Sbjct: 579 SPVGAIPPSPAAASGRDCIMSTWSTSPSPFSYSTRMAR**GLEPCCTWNVTVSPGYWHGT 400
Query: 1003 LVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 1170
L+N MSMMP RS SLRP LA P AVPLRSKW DTG**FMSVMITVS PE G
Sbjct: 399 LLNCMSMMPACRSSSLRPSLAMAPKAVPLRSKWKRDTG**FMSVMITVSGTPEHAG 232
Score = 84.9 bits (179), Expect(3) = 4e-031
Identities = 41/65 (63%), Positives = 44/65 (67%)
Frame = +1 / -3
Query: 658 G*LYWTKER*KVLGRQLAGMTLLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGV 837
G* W KE * LG Q G+T ATSVLPDSL MR EKG CM VS+RQ EPQDS +G
Sbjct: 762 G*STWMKEL*ISLGSQSPGLTWSATSVLPDSLVMRSEKGPCMGRRVSIRQMEPQDSVMGT 583
Query: 838 HRPVG 852
H PVG
Sbjct: 582 HSPVG 568
Score = 73.9 bits (155), Expect(4) = 6e-066
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = -3 / +2
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
FK+ N PF +M SCGN+PLFKDGKGCGSCY+IRC
Sbjct: 113 FKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRC 217
Score = 64.8 bits (135), Expect(3) = 4e-031
Identities = 32/52 (61%), Positives = 34/52 (65%)
Frame = +3 / -2
Query: 933 EVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSAA 1088
+V GV +LHVE Q R LARHP EL VDDAGV EL V A LG AE AA
Sbjct: 469 QVVGVGTVLHVERHRQPRVLARHPSELHVDDAGVPELFVAAVLGHGAEGGAA 314
Score = 61.6 bits (128), Expect(4) = 2e-039
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = -2 / +1
Query: 1170 PVLLRADGDGDHHRHELLPGVQVPLRPQRH 1081
P +LR GDGDHH HELLPGV +PLRPQRH
Sbjct: 232 PGVLRRAGDGDHHGHELLPGVPLPLRPQRH 321
Score = 51.0 bits (105), Expect(3) = 5e-043
Identities = 24/35 (68%), Positives = 25/35 (71%)
Frame = +1 / -3
Query: 1180 HRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
HRI *QEPQPLPSL +G LPQE M KG L LN
Sbjct: 216 HRIW*QEPQPLPSLKSGSLPQEVMAEKGGRLTFLN 112
Score = 50.6 bits (104), Expect(3) = 5e-043
Identities = 21/31 (67%), Positives = 22/31 (70%)
Frame = +3 / -2
Query: 717 DVVGDERLAGLVADADGEGRLHAVVGVHAPD 809
D+VGDERLAGLV DA EG LH VH PD
Sbjct: 703 DLVGDERLAGLVGDAQREGALHGAPCVHPPD 611
Score = 30.4 bits (60), Expect(3) = 4e-031
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +3 / -2
Query: 1221 EQWLVAAGAHGHEGVLVGVLE 1283
E+ LVAAG HG EG V VLE
Sbjct: 175 EERLVAAGGHGGEGWQVDVLE 113
Score = 25.4 bits (49), Expect(4) = 6e-066
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +3
Query: 823 SPGAPSGAW 797
SPGAPSG W
Sbjct: 597 SPGAPSGGW 623
Score = 24.9 bits (48), Expect(4) = 2e-039
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2 / +1
Query: 1011 VHQGAVRVPGPEDRVPR 961
V +GAV VPG + VPR
Sbjct: 391 VQKGAVPVPGADGDVPR 441
Score = 24.9 bits (48), Expect(4) = 2e-039
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3 / +2
Query: 1283 FKHTNQYPFMSMGSCG 1236
FK+ N PF +M SCG
Sbjct: 113 FKNVNLPPFSAMTSCG 160
Score = 22.6 bits (43), Expect(4) = 6e-066
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / +2
Query: 1358 WQRARATWY 1332
W ARATWY
Sbjct: 38 WLDARATWY 64
>gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002M09f, mRNA sequence
Length = 754
Score = 239 bits (517), Expect(3) = 1e-065
Identities = 92/128 (71%), Positives = 103/128 (80%)
Frame = -3 / +3
Query: 1358 WQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
W+ ARATWY GFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 192 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 371
Query: 1178 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 999
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KLRHSGIIDI+F RV
Sbjct: 372 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 551
Query: 998 PCEFPGLK 975
PCEFPGLK
Sbjct: 552 PCEFPGLK 575
Score = 175 bits (377), Expect = 5e-043
Identities = 77/101 (76%), Positives = 81/101 (80%)
Frame = +1 / -1
Query: 982 PGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPE 1161
PGNSHGTL+N MSMMPE RS SLRPGLA PNAVPLRSKWYL TG**FMSVM TVS PE
Sbjct: 568 PGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPE 389
Query: 1162 QDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
QD S +HRI *QEP PLPSL G LP + M+ KGYWLV LN
Sbjct: 388 QDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLN 266
Score = 25.4 bits (49), Expect(3) = 1e-065
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3 / +3
Query: 917 YEDGDGDVVQVDLMESKTARGPP 849
+ D DGDVV V +E+ + PP
Sbjct: 630 FHDRDGDVVPVGPIEANSVT*PP 698
Score = 25.4 bits (49), Expect(3) = 1e-065
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3 / +1
Query: 962 VEEYSNPVYFAVLVE 918
VE+ SNPVYF LV+
Sbjct: 586 VEQGSNPVYFTRLVD 630
>gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_H22 5', mRNA sequence
Length = 631
Score = 246 bits (531), Expect(2) = 1e-065
Identities = 97/120 (80%), Positives = 103/120 (85%)
Frame = -3 / +3
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FKH NQYPF SM SCGNQPLFKDGKGCGSCY+IRC D SCSG ETV+ITDMNYYPV++
Sbjct: 270 FKHVNQYPFSSMTSCGNQPLFKDGKGCGSCYQIRCSGDRSCSGNIETVMITDMNYYPVAQ 449
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVL 924
YHFDLSGTAFG LAK GLN+KLRHSGIIDI+F RVPC FPGLKI FHV E SN VY AVL
Sbjct: 450 YHFDLSGTAFGALAKSGLNEKLRHSGIIDIQFKRVPCNFPGLKINFHVVEGSNAVYLAVL 629
Score = 198 bits (427), Expect = 7e-050
Identities = 84/117 (71%), Positives = 91/117 (77%)
Frame = +1 / -1
Query: 931 AK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLD 1110
A+ T E S+TW I RPG HGTL+N MSMMPEWRS SLRP LA P AVPLRSKWY
Sbjct: 622 ARYTALEPSTTWKLILRPGKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWA 443
Query: 1111 TG**FMSVMITVSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCL 1281
TG**FMSV+ITVS+ PEQ+ S LHRI *QEPQPLPSLN GWLPQE M+ KGYW CL
Sbjct: 442 TG**FMSVIITVSMLPEQERSPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFTCL 272
Score = 25.4 bits (49), Expect(2) = 1e-065
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3 / +3
Query: 1385 SDAAVYWGPWQRARATWY 1332
+ A Y W ARATWY
Sbjct: 168 TSAVSYSSAWLPARATWY 221
>gb|BM097618.2|BM097618 EBem04_SQ002_D15_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_D15 5', mRNA sequence
Length = 477
Score = 249 bits (538), Expect = 3e-065
Identities = 96/149 (64%), Positives = 117/149 (78%)
Frame = -3 / +3
Query: 1202 GSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGI 1023
G+ + RC +CSG ETVIITDMNYYPVS+YHFDLSGTAFG +AK G ND+LRH+GI
Sbjct: 24 GAAHATRCVAHRACSGVPETVIITDMNYYPVSRYHFDLSGTAFGAMAKYGRNDELRHAGI 203
Query: 1022 IDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESKTARGPPTG 843
ID++F RVPC++PGL + F V+ SNP Y A+LVEYEDGDGDV QVD+MES+ PTG
Sbjct: 204 IDMQFKRVPCQYPGLTVTFRVQHGSNPNYLAILVEYEDGDGDVAQVDIMESRLPDRAPTG 383
Query: 842 RWTPMRESWGSVWRMDTNHRMQPPFSIRI 756
WTPMRESWGS+WR+D +Q PFS+R+
Sbjct: 384 YWTPMRESWGSIWRLDRLRPLQGPFSLRV 470
Score = 134 bits (287), Expect(2) = 4e-032
Identities = 72/148 (48%), Positives = 79/148 (53%)
Frame = +1 / -3
Query: 760 RMEKGGCMRWLVSMRQTEPQDSRIGVHRPVGGPRAVLDSIRXXXXXXXXXXXXXXXXAK* 939
R E G C +S RQ +P DS IGV PVG DSI A+*
Sbjct: 466 RSENGPCSGRSLSRRQMDPHDSLIGVQYPVGALSGSRDSIMSTCATSPSPSSYSTRIAR* 287
Query: 940 TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG* 1119
G + T N PG HGTL+N MSMMP WRS SLRP LA P AVPLRSK +TG*
Sbjct: 286 LGLDPCCTRNVTVSPGYWHGTLLNCMSMMPAWRSSSLRPYLAMAPKAVPLRSK**RETG* 107
Query: 1120 *FMSVMITVSVRPEQDGSFLHRIL*QEP 1203
*FMSVMITVS PEQ H + * P
Sbjct: 106 *FMSVMITVSGTPEQARWATHLVA*AAP 23
Score = 24.9 bits (48), Expect(2) = 4e-032
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1 / -1
Query: 1183 RIL*QEPQPLPSLNNG 1230
R * EP PLPSL +G
Sbjct: 48 RTW*HEPHPLPSLKSG 1
>gb|BI957183.1|BI957183 HVSMEn0007P24f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0007P24f,
mRNA sequence
Length = 844
Score = 234 bits (505), Expect(2) = 2e-063
Identities = 90/131 (68%), Positives = 102/131 (77%)
Frame = -3 / +1
Query: 1358 WQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
W+ ARATWY GFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 193 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 372
Query: 1178 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 999
D SC ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KLRHSG+IDI F RV
Sbjct: 373 TNDQSCFRNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGLIDIPFKRV 552
Query: 998 PCEFPGLKIGF 966
PCEFPGLK+ F
Sbjct: 553 PCEFPGLKVTF 585
Score = 172 bits (370), Expect = 5e-042
Identities = 75/107 (70%), Positives = 81/107 (75%)
Frame = +1 / -3
Query: 964 WNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMIT 1143
W RPGNSHGTL+N MS+ PE RS SLRPGLA PNAVPLRSKWYL TG**FMSVM T
Sbjct: 587 WKVTLRPGNSHGTLLNGMSIKPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTT 408
Query: 1144 VSVRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
VS +QD S +HRI *QEP PLPSL G LP + M+ KGYWLV LN
Sbjct: 407 VSGLRKQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLN 267
Score = 29.9 bits (59), Expect(2) = 2e-063
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -3 / +3
Query: 920 EYEDGDGDVVQVDLMES 870
E +DG+ D+VQVDLME+
Sbjct: 627 EVQDGERDLVQVDLMEA 677
>gb|BF260026.3|BF260026 HVSMEf0020O13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0020O13f, mRNA sequence
Length = 535
Score = 136 bits (291), Expect(2) = 3e-063
Identities = 55/74 (74%), Positives = 62/74 (83%)
Frame = -3 / +1
Query: 1085 GTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDG 906
GTAFG LAK GLN+KLRHSGIIDI+F RVPC FPGLKI FHV E SN VY AVL+EYED
Sbjct: 1 GTAFGALAKSGLNEKLRHSGIIDIQFRRVPCNFPGLKINFHVVEGSNAVYLAVLIEYEDM 180
Query: 905 DGDVVQVDLMESKT 864
DGDV+QVD+ E+ +
Sbjct: 181 DGDVIQVDMKEANS 222
Score = 127 bits (272), Expect(2) = 3e-063
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = -3 / +1
Query: 848 TGRWTPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVANNVIPANWRPNTFYRSFVQ 669
+G W MRESWGS+WRMD+NHR+Q PFS+RI ++SGK LVANNVIPANWRPNT YRSFVQ
Sbjct: 220 SGSWMAMRESWGSIWRMDSNHRLQGPFSMRITSDSGKKLVANNVIPANWRPNTDYRSFVQ 399
Query: 668 YS* 660
+S*
Sbjct: 400 FS* 408
Score = 102 bits (218), Expect(2) = 1e-038
Identities = 46/74 (62%), Positives = 52/74 (70%)
Frame = +1 / -3
Query: 625 APIAGRARIPIG*LYWTKER*KVLGRQLAGMTLLATSVLPDSLRMRMEKGGCMRWLVSMR 804
A +A + L WTKER* VLG QLAGMTLLATS LP+SL MRMEKG RWL S+R
Sbjct: 443 AHVAAHGPVGANQLNWTKER*SVLGLQLAGMTLLATSFLPESLVMRMEKGPWRRWLESIR 264
Query: 805 QTEPQDSRIGVHRP 846
Q +P DSRI +H P
Sbjct: 263 QMDPHDSRIAIHDP 222
Score = 78.5 bits (165), Expect(2) = 1e-038
Identities = 33/51 (64%), Positives = 36/51 (70%)
Frame = +1 / -3
Query: 931 AK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAV 1083
A+ T E S+TW I RPG HGTL+N MSMMPEWRS SLRP LA P AV
Sbjct: 155 ARYTALEPSTTWKLILRPGKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAV 3
Score = 73.0 bits (153), Expect(3) = 3e-026
Identities = 35/52 (67%), Positives = 39/52 (75%)
Frame = +3 / -2
Query: 930 REVDGVRVLLHVEPDLQARELARHPGELDVDDAGVAELVVEAGLGQPAERSA 1085
R+V V L HVE DL+A E+ARHP ELDVDDA VAEL+VEA LGQ AE A
Sbjct: 156 RQVHRVGALHHVEVDLEAGEVARHPPELDVDDARVAELLVEARLGQGAEGRA 1
Score = 60.2 bits (125), Expect(3) = 3e-026
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +2 / -1
Query: 650 SRSVSCTGRRSGRRCWGASWPG*RCWRRASCRT 748
S ++ TGRRSG RCW +SWPG* CW ASCR+
Sbjct: 418 SGPIN*TGRRSGSRCWASSWPG*HCWPPASCRS 320
Score = 24.0 bits (46), Expect(3) = 3e-026
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1 / -2
Query: 814 PQDSRIGVHRPVGGPR 861
P ++ +GVH P G PR
Sbjct: 294 PLEAVVGVHPPDGSPR 247
>gb|BI959378.1|BI959378 HVSMEn0019H04f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0019H04f,
mRNA sequence
Length = 663
Score = 226 bits (488), Expect(3) = 3e-063
Identities = 88/128 (68%), Positives = 99/128 (77%)
Frame = -3 / +3
Query: 1358 WQRARATWYXXXXXXXXXXXXXXXGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
W+ ARATWY GFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 192 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 371
Query: 1178 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRV 999
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AKPGL++KLRHS IIDI+F RV
Sbjct: 372 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSRIIDIQFKRV 551
Query: 998 PCEFPGLK 975
PCE P K
Sbjct: 552 PCEVPWSK 575
Score = 162 bits (349), Expect(2) = 3e-040
Identities = 73/100 (73%), Positives = 77/100 (77%)
Frame = +1 / -3
Query: 985 GNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQ 1164
G SHGTL+N MSMM E RS SL PGLA PNAVPLRSKWYL TG**FMSVM TVS PEQ
Sbjct: 565 GTSHGTLLNWMSMMRECRSFSLSPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQ 386
Query: 1165 DGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
D S +HRI *QEP PLPSL G LP + M+ KGYWLV LN
Sbjct: 385 DWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLN 266
Score = 31.3 bits (62), Expect(3) = 3e-063
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3 / +2
Query: 950 SNPVYFAVLVEYEDGDGD 897
SNPVYF V VEY+ DG+
Sbjct: 602 SNPVYFPVPVEYQGRDGN 655
Score = 24.4 bits (47), Expect(3) = 3e-063
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3 / +1
Query: 992 EFPGLKIGFHVEEYSNP 942
+FPGLK FHVE P
Sbjct: 559 KFPGLKGTFHVEPGVEP 609
Score = 23.5 bits (45), Expect(2) = 3e-040
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1 / -2
Query: 958 STWNPIFRPGN 990
STW FRPGN
Sbjct: 593 STWKVPFRPGN 561
>gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL5B4 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 634
Score = 184 bits (396), Expect(2) = 2e-062
Identities = 71/103 (68%), Positives = 89/103 (86%)
Frame = -3 / +3
Query: 1169 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCE 990
P+CSG +TVIITDMNY PVS+YHFDLSGTAFG +AK G ND+LRH+GII+++F RVPC+
Sbjct: 315 PACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQ 494
Query: 989 FPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESKTA 861
+PGL + FHVEE SNP Y A+L EYE+GDGDV Q+D+MES+T+
Sbjct: 495 YPGLTVTFHVEEXSNPFYMAILGEYENGDGDVKQLDIMESRTS 623
Score = 105 bits (225), Expect(2) = 2e-033
Identities = 54/102 (52%), Positives = 58/102 (56%)
Frame = +1 / -1
Query: 865 VLDSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSL 1044
V DSI A * GF+ SST N PG HGTL+N M +MP WRS
Sbjct: 619 VRDSIMSSCFTSPSPFSYSPRIAM*NGFDXSST*NVTVNPGYWHGTLLNCMLIMPAWRSS 440
Query: 1045 SLRPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 1170
SLRP LA P AVPLRSKW +TG *FMSVMITV PE G
Sbjct: 439 SLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHAG 314
Score = 76.7 bits (161), Expect(2) = 2e-062
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -3 / +3
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
FK+ N PF SM SCGNQPLFKDGKGCGSCY+IRC
Sbjct: 195 FKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 299
Score = 57.9 bits (120), Expect(2) = 2e-033
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +1 / -1
Query: 1174 FLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
F H I *QEPQPLPSL +GWLPQE M+ KG L LN
Sbjct: 304 FKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLN 194
>gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL94h5 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 661
Score = 183 bits (395), Expect(2) = 2e-062
Identities = 71/101 (70%), Positives = 88/101 (87%)
Frame = -3 / +2
Query: 1169 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCE 990
P+CSG +TVIITDMNY PVS+YHFDLSGTAFG +AK G ND+LRH+GII+++F RVPC+
Sbjct: 314 PACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQ 493
Query: 989 FPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESK 867
+PGL + FHVEE SNP Y A+LVEYE+GDGDV Q+D+MES+
Sbjct: 494 YPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESR 616
Score = 111 bits (238), Expect(2) = 7e-035
Identities = 54/100 (54%), Positives = 58/100 (58%)
Frame = +1 / -2
Query: 871 DSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSL 1050
DSI A * GF+ SSTWN PG HGTL+N M +MP WRS SL
Sbjct: 612 DSIMSSCFTSPSPFSYSTRIAM*NGFDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSL 433
Query: 1051 RPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 1170
RP LA P AVPLRSKW +TG *FMSVMITV PE G
Sbjct: 432 RPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHAG 313
Score = 76.7 bits (161), Expect(2) = 2e-062
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -3 / +1
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
FK+ N PF SM SCGNQPLFKDGKGCGSCY+IRC
Sbjct: 193 FKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 297
Score = 56.5 bits (117), Expect(2) = 7e-035
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = +1 / -3
Query: 1171 SFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
S H I *QEPQPLPSL +GWLPQE M+ KG L LN
Sbjct: 305 SXKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLN 192
>gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. vulgare cDNA clone HA22I03
5-PRIME, mRNA sequence
Length = 597
Score = 183 bits (395), Expect(2) = 2e-062
Identities = 71/101 (70%), Positives = 88/101 (87%)
Frame = -3 / +1
Query: 1169 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCE 990
P+CSG +TVIITDMNY PVS+YHFDLSGTAFG +AK G ND+LRH+GII+++F RVPC+
Sbjct: 268 PACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQ 447
Query: 989 FPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESK 867
+PGL + FHVEE SNP Y A+LVEYE+GDGDV Q+D+MES+
Sbjct: 448 YPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESR 570
Score = 109 bits (232), Expect(2) = 2e-034
Identities = 53/100 (53%), Positives = 57/100 (57%)
Frame = +1 / -2
Query: 871 DSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSL 1050
DSI A * G + SSTWN PG HGTL+N M +MP WRS SL
Sbjct: 566 DSIMSSCFTSPSPFSYSTRIAM*NGLDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSL 387
Query: 1051 RPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 1170
RP LA P AVPLRSKW +TG *FMSVMITV PE G
Sbjct: 386 RPYLAMAPKAVPLRSKW*RETGS*FMSVMITVFGTPEHAG 267
Score = 76.7 bits (161), Expect(2) = 2e-062
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -3 / +1
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
FK+ N PF SM SCGNQPLFKDGKGCGSCY+IRC
Sbjct: 148 FKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 252
Score = 57.9 bits (120), Expect(2) = 2e-034
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +1 / -2
Query: 1174 FLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
F H I *QEPQPLPSL +GWLPQE M+ KG L LN
Sbjct: 257 FKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLN 147
>gb|BF253787.2|BF253787 HVSMEf0002C01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0002C01f, mRNA sequence
Length = 823
Score = 188 bits (405), Expect(2) = 3e-062
Identities = 74/90 (82%), Positives = 83/90 (92%)
Frame = -3 / +3
Query: 1142 VIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFH 963
V+ITDMNYYPV+ YHFDLSGTAFG+LAKPG ND+LRH+GIIDI+FTRV CEFPGLK+GFH
Sbjct: 3 VMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFH 182
Query: 962 VEEYSNPVYFAVLVEYEDGDGDVVQVDLME 873
VEE SN VY A+LVEYE+GDGDVV VDLME
Sbjct: 183 VEEGSNAVYMAILVEYENGDGDVVHVDLME 272
Score = 116 bits (247), Expect(2) = 7e-035
Identities = 52/68 (76%), Positives = 54/68 (79%)
Frame = +1 / -1
Query: 940 TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG* 1119
T + SSTWNP F PGNSH TLVN MSMMP RS SLRPGLASLP AVPLRSKW TG*
Sbjct: 205 TALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG* 26
Query: 1120 *FMSVMIT 1143
*FMSV+IT
Sbjct: 25 *FMSVIIT 2
Score = 71.6 bits (150), Expect(2) = 3e-062
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = -3 / +3
Query: 845 GRWTPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVANNVIP 711
GRWTPM +SWGS+WR+ NH +Q P+SIRIR E G TL+ +IP
Sbjct: 297 GRWTPMLKSWGSIWRLYYNHGIQTPYSIRIRCEFG*TLIMRILIP 431
Score = 52.4 bits (108), Expect(2) = 7e-035
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +1 / -1
Query: 703 QLAGMTLLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGVHRP 846
Q+ G+ + V P+S RMR+E G C+ WL RQ +P D IGVHRP
Sbjct: 439 QI*GIKMRIMRV*PNSHRMRIEYGVCIPWL*YRRQMDPHDLSIGVHRP 296
>gb|CV060955.1|CV060955 BNEL63c5 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL63c5 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 634
Score = 118 bits (253), Expect(4) = 7e-062
Identities = 45/71 (63%), Positives = 59/71 (83%)
Frame = -3 / +3
Query: 1079 AFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDG 900
AFG +AK G ND+LRH+GII+++F RVPC++P L + FHVEE SNP Y +LVEYE+GDG
Sbjct: 348 AFGGMAKYGRNDELRHAGIINMQFKRVPCQYPXLTVTFHVEEGSNPFYMGILVEYENGDG 527
Query: 899 DVVQVDLMESK 867
DV Q+D+MES+
Sbjct: 528 DVKQLDIMESR 560
Score = 76.7 bits (161), Expect(4) = 7e-062
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -3 / +2
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
FK+ N PF SM SCGNQPLFKDGKGCGSCY+IRC
Sbjct: 137 FKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 241
Score = 63.4 bits (132), Expect(4) = 7e-062
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -3 / +2
Query: 1169 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGR 1068
P+CSG +TVIITDMNY PVS+YHFDLSGT R
Sbjct: 257 PACSGVPKTVIITDMNYDPVSRYHFDLSGTRLRR 358
Score = 62.9 bits (131), Expect(4) = 1e-030
Identities = 28/48 (58%), Positives = 31/48 (64%)
Frame = +1 / -1
Query: 937 *TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNA 1080
* GF+ SSTWN G HGTL+N M +MP WRS SLRP LA P A
Sbjct: 490 *NGFDPSSTWNVTVNXGYWHGTLLNCMLIMPAWRSSSLRPYLAMPPKA 347
Score = 57.9 bits (120), Expect(4) = 1e-030
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +1 / -2
Query: 1174 FLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
F H I *QEPQPLPSL +GWLPQE M+ KG L LN
Sbjct: 246 FKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLN 136
Score = 45.1 bits (92), Expect(4) = 1e-030
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = +1 / -2
Query: 1069 LPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 1170
L VPLRSKW +TG *FMSVMITV PE G
Sbjct: 357 LRRRVPLRSKW*RETGS*FMSVMITVLGTPEHAG 256
Score = 36.8 bits (74), Expect(4) = 7e-062
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3 / +3
Query: 851 PTGRWTPMRESWGS 810
PTG+W PM+ESWGS
Sbjct: 591 PTGQWVPMKESWGS 632
Score = 23.5 bits (45), Expect(4) = 1e-030
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1 / -1
Query: 811 EPQDSRIGVHRPVG 852
+P DS +G H PVG
Sbjct: 631 DPHDSFMGTHCPVG 590
>gb|BF259343.2|BF259343 HVSMEf0019F11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0019F11f, mRNA sequence
Length = 759
Score = 216 bits (467), Expect(2) = 2e-061
Identities = 81/105 (77%), Positives = 94/105 (89%)
Frame = -3 / +1
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSK 1104
FK+ N+YPFM+M SCGNQPLFKDGKGCG+CYKI+C K +CSGR ETV+ITDMNYYPV+
Sbjct: 373 FKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNYYPVAP 552
Query: 1103 YHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIG 969
YH DLSGTAFG+LAKPG ND+LRH+GIIDI+FTRV CEFPGL+ G
Sbjct: 553 YHLDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLESG 687
Score = 164 bits (353), Expect(2) = 3e-041
Identities = 75/105 (71%), Positives = 79/105 (75%)
Frame = +1 / -2
Query: 970 PIFRPGNSHGTLVNSMSMMPEWRSLSLRPGLASLPNAVPLRSKWYLDTG**FMSVMITVS 1149
P+ PGNSH TLVN MSMMP RS SLRPGLASLP AVPLRSKW TG**FMSV+ITVS
Sbjct: 686 PLSSPGNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**FMSVIITVS 507
Query: 1150 VRPEQDGSFLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
RPE F+H IL* PQPLPSLN+GWLPQE M M GY LN
Sbjct: 506 CRPEHALCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLN 372
Score = 40.9 bits (83), Expect(2) = 2e-061
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -3 / +3
Query: 977 KIGFHVEEYSNPVYFAVLVEYEDGDG 900
K G +EE SN VY A+LVEYE+GDG
Sbjct: 681 KWGSTLEEGSNAVYMAILVEYENGDG 758
Score = 25.4 bits (49), Expect(2) = 3e-041
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / -1
Query: 961 TWNPIFRPG 987
TWNP F+PG
Sbjct: 696 TWNPTFKPG 670
>gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. vulgare cDNA clone HA05E07
5-PRIME, mRNA sequence
Length = 504
Score = 181 bits (389), Expect(2) = 2e-061
Identities = 70/99 (70%), Positives = 86/99 (86%)
Frame = -3 / +2
Query: 1169 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCE 990
P+CSG +TVIITDMNY PVS+YHFDLSGTAFG +AK G ND+LRH+GII+++F RVPC+
Sbjct: 206 PACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQ 385
Query: 989 FPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLME 873
+PGL + FHVEE SNP Y A+LVEYE+GDGDV Q+D+ME
Sbjct: 386 YPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIME 502
Score = 109 bits (232), Expect(2) = 2e-034
Identities = 53/100 (53%), Positives = 57/100 (57%)
Frame = +1 / -1
Query: 871 DSIRXXXXXXXXXXXXXXXXAK*TGFEYSSTWNPIFRPGNSHGTLVNSMSMMPEWRSLSL 1050
DSI A * G + SSTWN PG HGTL+N M +MP WRS SL
Sbjct: 504 DSIMSSCFTSPSPFSYSTRIAM*NGLDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSL 325
Query: 1051 RPGLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 1170
RP LA P AVPLRSKW +TG *FMSVMITV PE G
Sbjct: 324 RPYLAMAPKAVPLRSKW*RETGS*FMSVMITVFGTPEHAG 205
Score = 76.7 bits (161), Expect(2) = 2e-061
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = -3 / +2
Query: 1283 FKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 1179
FK+ N PF SM SCGNQPLFKDGKGCGSCY+IRC
Sbjct: 86 FKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 190
Score = 57.9 bits (120), Expect(2) = 2e-034
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +1 / -1
Query: 1174 FLHRIL*QEPQPLPSLNNGWLPQEPMDMKGYWLVCLN 1284
F H I *QEPQPLPSL +GWLPQE M+ KG L LN
Sbjct: 195 FKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLN 85
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 643,733,435
Number of Sequences: 312970
Number of extensions: 10110918
Number of successful extensions: 105882
Number of sequences better than 1.0e-020: 221
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 19826387922
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)