TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419405.2.1
(1293 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgar... 338 e-121
gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgar... 307 e-120
gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedl... 309 e-109
gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgar... 335 e-108
gb|BQ465138.1|BQ465138 HU02M06r HU Hordeum vulgare subsp. v... 321 e-105
gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgar... 309 e-104
gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachi... 344 e-104
gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedl... 340 e-104
gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachi... 338 e-103
gb|BI960089.1|BI960089 HVSMEn0023C15f Hordeum vulgare rachi... 370 e-102
gb|BM372935.2|BM372935 EBma04_SQ002_H04_R maternal, 10 DPA,... 357 7e-098
gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. v... 338 3e-095
gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 ... 271 5e-095
gb|BI957582.1|BI957582 HVSMEn0010D14f Hordeum vulgare rachi... 341 4e-093
gb|BG310251.1|BG310251 HVSMEc0016K12f Hordeum vulgare seedl... 334 8e-091
gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachi... 333 1e-090
gb|BE060246.3|BE060246 HVSMEg0011L08f Hordeum vulgare pre-a... 206 5e-090
gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachi... 331 5e-090
gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachi... 329 2e-089
gb|AV917139.1|AV917139 AV917139 K. Sato unpublished cDNA li... 204 8e-088
gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedl... 187 4e-087
gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm libra... 182 6e-087
gb|BF256653.2|BF256653 HVSMEf0010J19f Hordeum vulgare seedl... 318 5e-086
gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachi... 275 6e-086
gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. v... 317 1e-085
gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm librar... 178 1e-085
gb|CB882163.1|CB882163 HL01B01w HL Hordeum vulgare subsp. v... 316 2e-085
gb|BF618493.2|BF618493 HVSMEc0005N13f Hordeum vulgare seedl... 296 1e-084
gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, dro... 310 1e-083
gb|BI959328.1|BI959328 HVSMEn0019E09f Hordeum vulgare rachi... 240 3e-083
gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachi... 308 3e-083
gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachi... 301 7e-081
gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DA... 275 8e-081
gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachi... 297 1e-079
gb|AV923254.1|AV923254 AV923254 K. Sato unpublished cDNA li... 297 1e-079
gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library... 182 2e-079
gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm librar... 182 2e-079
gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. v... 182 2e-079
gb|CV060955.1|CV060955 BNEL63c5 Barley EST endosperm librar... 134 1e-078
gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. v... 179 2e-078
gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachi... 275 6e-078
gb|CA031744.1|CA031744 HX11A03r HX Hordeum vulgare subsp. v... 287 9e-077
gb|BE454367.2|BE454367 HVSMEh0093N18f Hordeum vulgare 5-45 ... 214 4e-076
gb|BF259343.2|BF259343 HVSMEf0019F11f Hordeum vulgare seedl... 267 5e-076
gb|CA022237.1|CA022237 HZ42I19r HZ Hordeum vulgare subsp. v... 283 1e-075
gb|BU980194.1|BU980194 HA18P06r HA Hordeum vulgare subsp. v... 283 2e-075
gb|BQ459628.1|BQ459628 HA08J01r HA Hordeum vulgare subsp. v... 145 6e-075
gb|CA023986.1|CA023986 HZ48A15r HZ Hordeum vulgare subsp. v... 281 8e-075
gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DA... 275 2e-074
gb|BI957183.1|BI957183 HVSMEn0007P24f Hordeum vulgare rachi... 270 3e-074
gb|CK124171.1|CK124171 BES1824107e17 BES1824 Hordeum vulgar... 145 1e-073
gb|BI959378.1|BI959378 HVSMEn0019H04f Hordeum vulgare rachi... 262 3e-073
gb|BF625170.3|BF625170 HVSMEa0006D08f Hordeum vulgare seedl... 275 5e-073
gb|CA022206.1|CA022206 HZ42H09r HZ Hordeum vulgare subsp. v... 271 6e-072
gb|BQ759881.1|BQ759881 EBpi05_SQ004_P16_R pistil, 8 DPA, no... 166 6e-072
gb|BI956858.1|BI956858 HVSMEn0005K24f Hordeum vulgare rachi... 138 3e-070
gb|BI959812.1|BI959812 HVSMEn0021L03f Hordeum vulgare rachi... 251 4e-067
gb|AL507275.1|AL507275 AL507275 Hordeum vulgare Barke devel... 221 1e-066
gb|CV063456.1|CV063456 BNEL8E2 Barley EST endosperm library... 138 3e-066
gb|BU978694.1|BU978694 HA14A06r HA Hordeum vulgare subsp. v... 251 7e-066
gb|BU993991.1|BU993991 HM05E17r HM Hordeum vulgare subsp. v... 249 3e-065
gb|AL504600.1|AL504600 AL504600 Hordeum vulgare Barke roots... 138 4e-065
gb|CV054400.1|CV054400 BNEL10B12 Barley EST endosperm libra... 134 5e-065
gb|BM097618.2|BM097618 EBem04_SQ002_D15_R embryo, 12 DPA, n... 245 2e-064
gb|BQ758707.1|BQ758707 EBma07_SQ002_G16_R maternal, 21 DPA,... 246 2e-064
gb|CV061225.1|CV061225 BNEL66d10 Barley EST endosperm libra... 134 2e-064
gb|BI949344.1|BI949344 HVSMEl0013G22f Hordeum vulgare spike... 134 2e-064
gb|BF260026.3|BF260026 HVSMEf0020O13f Hordeum vulgare seedl... 136 1e-063
gb|CK124612.1|CK124612 BES1824109m10 BES1824 Hordeum vulgar... 233 1e-060
gb|BQ765573.1|BQ765573 EBro03_SQ007_F17_R root, 3 week, wat... 136 1e-060
gb|BF253787.2|BF253787 HVSMEf0002C01f Hordeum vulgare seedl... 182 2e-060
gb|CV058074.1|CV058074 BNEL34a7 Barley EST endosperm librar... 140 7e-060
gb|CA017263.1|CA017263 HV14A15u HV Hordeum vulgare subsp. v... 140 7e-060
gb|BI957249.1|BI957249 HVSMEn0008G13f Hordeum vulgare rachi... 230 2e-059
gb|BI960393.1|BI960393 HVSMEn0024H07f Hordeum vulgare rachi... 230 2e-059
gb|BQ764067.1|BQ764067 EBro03_SQ006_N05_R root, 3 week, wat... 128 3e-059
gb|BE603113.3|BE603113 HVSMEh0101P24f Hordeum vulgare 5-45 ... 229 3e-059
gb|BQ753409.1|BQ753409 EBan01_SQ004_D03_R anther, yellow st... 197 5e-059
gb|BU981754.1|BU981754 HA24I17r HA Hordeum vulgare subsp. v... 134 7e-059
gb|BU995044.1|BU995044 HM09A07r HM Hordeum vulgare subsp. v... 202 3e-056
gb|BI950777.1|BI950777 HVSMEl0023C15f Hordeum vulgare spike... 113 3e-056
gb|AV928430.1|AV928430 AV928430 K. Sato unpublished cDNA li... 128 2e-055
gb|BU967134.1|BU967134 HB03G05r BC Hordeum vulgare subsp. v... 182 3e-055
gb|BQ468475.1|BQ468475 HM01F21T HM Hordeum vulgare subsp. v... 186 5e-055
gb|CA018998.1|CA018998 HV10G08r HV Hordeum vulgare subsp. v... 138 5e-055
gb|CW512145.1|CW512145 ToNAR_Morex_118b Morex Exon trapped ... 163 5e-055
gb|CA019796.1|CA019796 HV13D05r HV Hordeum vulgare subsp. v... 214 8e-055
gb|BE230894.2|BE230894 HVSMEg0001I02f Hordeum vulgare pre-a... 200 9e-055
gb|CV055940.1|CV055940 BNEL12B5 Barley EST endosperm librar... 117 2e-054
gb|BQ469285.1|BQ469285 HM03P13r HM Hordeum vulgare subsp. v... 212 3e-054
gb|BU981183.1|BU981183 HA22N23r HA Hordeum vulgare subsp. v... 134 4e-054
gb|BM101447.2|BM101447 EBpi01_SQ003_O01_R pistil, 1 DPA, no... 140 4e-054
gb|CB883976.1|CB883976 HM06N05r HM Hordeum vulgare subsp. v... 186 1e-053
gb|CA004554.1|CA004554 HS17P08r HS Hordeum vulgare subsp. v... 207 9e-053
gb|BI956518.1|BI956518 HVSMEn0003O09f Hordeum vulgare rachi... 207 1e-052
gb|BI958420.1|BI958420 HVSMEn0014O10f Hordeum vulgare rachi... 135 3e-052
gb|CV054086.1|CV054086 BNEL106e9 Barley EST endosperm libra... 135 4e-051
gb|BQ764421.1|BQ764421 EBan01_SQ005_G21_R anther, yellow st... 200 1e-050
gb|BJ463021.1|BJ463021 BJ463021 K. Sato unpublished cDNA li... 113 1e-049
gb|BU983094.1|BU983094 HA28I14r HA Hordeum vulgare subsp. v... 100 1e-048
gb|CA004842.1|CA004842 HS18N14r HS Hordeum vulgare subsp. v... 193 2e-048
gb|BQ459308.1|BQ459308 HA01I15r HA Hordeum vulgare subsp. v... 107 3e-048
gb|BI958795.1|BI958795 HVSMEn0016K11f Hordeum vulgare rachi... 192 3e-048
gb|AV917082.1|AV917082 AV917082 K. Sato unpublished cDNA li... 183 6e-048
gb|CB882255.1|CB882255 HL01F14w HL Hordeum vulgare subsp. v... 191 6e-048
gb|BF257093.3|BF257093 HVSMEf0011N11f Hordeum vulgare seedl... 116 9e-048
gb|BG368109.2|BG368109 HVSMEi0015L12f Hordeum vulgare 20 DA... 112 8e-047
gb|BQ469137.1|BQ469137 HM03I08r HM Hordeum vulgare subsp. v... 186 3e-046
gb|CB884030.1|CB884030 HM10H05r HM Hordeum vulgare subsp. v... 186 3e-046
gb|CB884057.1|CB884057 HM12C11r HM Hordeum vulgare subsp. v... 186 3e-046
gb|BI957226.1|BI957226 HVSMEn0008D17f Hordeum vulgare rachi... 185 4e-046
gb|BG368652.1|BG368652 HVSMEi0020B24f Hordeum vulgare 20 DA... 110 5e-046
gb|BG416780.1|BG416780 HVSMEk0014H23f Hordeum vulgare testa... 145 2e-045
gb|BI954215.1|BI954215 HVSMEm0016K09f Hordeum vulgare green... 181 7e-045
gb|BQ764220.1|BQ764220 EBan01_SQ005_P04_R anther, yellow st... 179 2e-044
gb|CA019924.1|CA019924 HV13L18r HV Hordeum vulgare subsp. v... 116 3e-044
gb|BU980984.1|BU980984 HA22E18r HA Hordeum vulgare subsp. v... 112 1e-043
gb|CB881234.1|CB881234 HM09C23w HM Hordeum vulgare subsp. v... 126 1e-043
gb|CB880652.1|CB880652 HM07E17w HM Hordeum vulgare subsp. v... 126 1e-043
gb|BM098205.2|BM098205 EBpi03_SQ002_N14_R pistil, 4 DPA, no... 112 1e-043
gb|BG368126.2|BG368126 HVSMEi0015M21f Hordeum vulgare 20 DA... 112 1e-043
gb|BI956468.1|BI956468 HVSMEn0003I18f Hordeum vulgare rachi... 171 5e-042
gb|BQ753618.1|BQ753618 EBan01_SQ004_M07_R anther, yellow st... 168 5e-041
gb|BU990646.1|BU990646 HF25K12r HF Hordeum vulgare subsp. v... 128 1e-039
gb|BF257559.2|BF257559 HVSMEf0013D22f Hordeum vulgare seedl... 97 1e-039
gb|CB883447.1|CB883447 HQ02E17w HQ Hordeum vulgare subsp. v... 163 2e-039
gb|BQ467895.1|BQ467895 HR01E04r HR Hordeum vulgare subsp. v... 128 6e-039
gb|CV061235.1|CV061235 BNEL66d9 Barley EST endosperm librar... 134 9e-039
gb|BU986289.1|BU986289 HF11E17r HF Hordeum vulgare subsp. v... 126 2e-037
gb|BF257516.2|BF257516 HVSMEf0013C01f Hordeum vulgare seedl... 155 4e-037
gb|CB881182.1|CB881182 HM09A07w HM Hordeum vulgare subsp. v... 74 7e-036
gb|BM442635.2|BM442635 EBan01_SQ003_L19_R anther, yellow st... 100 9e-036
gb|BG369116.2|BG369116 HVSMEi0021M10f Hordeum vulgare 20 DA... 102 2e-035
gb|BG308983.2|BG308983 HVSMEc0001E03f Hordeum vulgare seedl... 148 8e-035
gb|BQ753440.1|BQ753440 EBan01_SQ004_E11_R anther, yellow st... 145 4e-034
gb|BE193443.3|BE193443 HVSMEh0081A10f Hordeum vulgare 5-45 ... 66 5e-034
gb|BG299356.2|BG299356 HVSMEa0019J09f Hordeum vulgare seedl... 122 1e-033
gb|BF260322.3|BF260322 HVSMEf0021L02f Hordeum vulgare seedl... 144 1e-033
gb|BG300504.2|BG300504 HVSMEb0017E15f Hordeum vulgare seedl... 122 3e-033
gb|BF254343.3|BF254343 HVSMEf0003L07f Hordeum vulgare seedl... 99 3e-033
gb|BQ767036.1|BQ767036 EBro08_SQ007_G24_R root, 3 week, dro... 114 4e-033
gb|BI958556.1|BI958556 HVSMEn0015J19f Hordeum vulgare rachi... 80 8e-033
gb|AJ461923.1|AJ461923 AJ461923 S00002 Hordeum vulgare subs... 140 1e-032
gb|BQ753385.1|BQ753385 EBan01_SQ004_C01_R anther, yellow st... 139 3e-032
gb|CK122095.1|CK122095 BES1824101g21 BES1824 Hordeum vulgar... 138 6e-032
gb|BJ453165.1|BJ453165 BJ453165 K. Sato unpublished cDNA li... 128 3e-031
gb|BU984183.1|BU984183 HF03D17r HF Hordeum vulgare subsp. v... 126 1e-030
gb|BJ460714.1|BJ460714 BJ460714 K. Sato unpublished cDNA li... 128 2e-030
gb|AV918397.1|AV918397 AV918397 K. Sato unpublished cDNA li... 131 7e-030
gb|CB876346.1|CB876346 HX11A03w HX Hordeum vulgare subsp. v... 131 7e-030
gb|BM097179.2|BM097179 EBpi07_SQ002_K14_R pistil, 12 DPA, n... 126 9e-030
gb|CA028060.1|CA028060 HZ60N21r HZ Hordeum vulgare subsp. v... 97 9e-030
gb|AV918336.1|AV918336 AV918336 K. Sato unpublished cDNA li... 129 4e-029
gb|BE421427.1|BE421427 HWM009.B12 ITEC HWM Barley Leaf Libr... 128 7e-029
gb|CA001233.1|CA001233 HS18N14u HS Hordeum vulgare subsp. v... 128 7e-029
gb|BG368897.2|BG368897 HVSMEi0021D09f Hordeum vulgare 20 DA... 66 8e-029
gb|CB884040.1|CB884040 HM11B07r HM Hordeum vulgare subsp. v... 127 1e-028
gb|BQ760850.1|BQ760850 EBro03_SQ003_K11_R root, 3 week, wat... 126 2e-028
gb|CB881625.1|CB881625 HM10G06w HM Hordeum vulgare subsp. v... 92 1e-027
gb|CB880524.1|CB880524 HM06N05w HM Hordeum vulgare subsp. v... 92 1e-027
gb|BQ661443.1|BQ661443 HM03I08u HM Hordeum vulgare subsp. v... 92 1e-027
gb|BF259315.3|BF259315 HVSMEf0019E07f Hordeum vulgare seedl... 72 8e-027
gb|CA001449.1|CA001449 HS17P08u HS Hordeum vulgare subsp. v... 119 4e-026
gb|BJ467335.1|BJ467335 BJ467335 K. Sato unpublished cDNA li... 91 5e-026
gb|AJ436682.1|AJ436682 AJ436682 S00002 Hordeum vulgare subs... 100 6e-026
gb|AJ463502.1|AJ463502 AJ463502 S00002 Hordeum vulgare subs... 100 6e-026
gb|BF256315.1|BF256315 HVSMEf0009N16f Hordeum vulgare seedl... 116 4e-025
gb|BQ658207.1|BQ658207 HA05E07u HA Hordeum vulgare subsp. v... 63 6e-025
gb|BQ470849.1|BQ470849 HX04D14r HX Hordeum vulgare subsp. v... 114 9e-025
gb|BQ665573.1|BQ665573 HX04D14u HX Hordeum vulgare subsp. v... 114 9e-025
gb|BQ661556.1|BQ661556 HM03P13u HM Hordeum vulgare subsp. v... 112 3e-024
gb|BQ662029.1|BQ662029 HR01E04u HR Hordeum vulgare subsp. v... 112 3e-024
gb|BM442090.2|BM442090 EBan01_SQ002_C16_R anther, yellow st... 78 2e-023
gb|BU978858.1|BU978858 HA14H15r HA Hordeum vulgare subsp. v... 80 6e-023
gb|BU983370.1|BU983370 HA29H20r HA Hordeum vulgare subsp. v... 65 1e-022
gb|BQ663461.1|BQ663461 HU02M06u HU Hordeum vulgare subsp. v... 106 2e-022
gb|CA019031.1|CA019031 HV10I11r HV Hordeum vulgare subsp. v... 106 3e-022
gb|AL509792.1|AL509792 AL509792 Hordeum vulgare Barke devel... 74 1e-021
gb|AJ462588.1|AJ462588 AJ462588 S00002 Hordeum vulgare subs... 103 2e-021
gb|BG369955.2|BG369955 HVSMEi0026K23f Hordeum vulgare 20 DA... 66 3e-021
gb|CA018598.1|CA018598 HV09B16r HV Hordeum vulgare subsp. v... 102 4e-021
>gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010F166 5-PRIME, mRNA sequence
Length = 750
Score = 338 bits (732), Expect(3) = e-121
Identities = 133/173 (76%), Positives = 149/173 (86%)
Frame = +1 / +1
Query: 178 AVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGS 357
AV G ARATWYG PNGAGP DNGGACGFK+ N+YPFM+M SCGNQPLFKDGKGCG+
Sbjct: 1 AVSIGQSGVARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGA 180
Query: 358 CYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIID 537
CYKI+C K +CSGR ETV+ITDMNYYPV+ YHFDLSGTAFG+LAK G ND+LRH+GIID
Sbjct: 181 CYKIKCTKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIID 360
Query: 538 IEFTRVPCEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMESKTAR 696
I+FTRV CEFPGLK+GFHVEE S+ VY A+LVEYE+GDGDVVQVDLMES R
Sbjct: 361 IQFTRVACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLMESGRGR 519
Score = 218 bits (470), Expect(3) = 2e-076
Identities = 103/168 (61%), Positives = 108/168 (64%)
Frame = -2 / -2
Query: 683 DSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSL 504
DS+R A T L+ SSTWNP PGNSH TLVN MSMMP RS SL
Sbjct: 506 DSMRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSL 327
Query: 503 RPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNG 324
RP LASLP AVPLRSKW TG**FMSV+ITVS RPE F+H IL* P PLPSLN+G
Sbjct: 326 RPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSG 147
Query: 323 WFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQVARAFCQGPQYT 180
W PQE M M GY L P APPLS GPAPLG PYQVARA P T
Sbjct: 146 WLPQEVMAMNGYRFTFLNPQAPPLS*GPAPLGAPYQVARATPDCPMDT 3
Score = 176 bits (378), Expect(3) = 2e-048
Identities = 72/112 (64%), Positives = 84/112 (75%)
Frame = +3 / +3
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPVLLRADGDGDHHRHELLPG 443
+R+Q +PVP+H H LLR+PA VQGRQG+R +LQD V E +LRA GDGD H HELLPG
Sbjct: 87 LRVQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQGVLRAAGDGDDHGHELLPG 266
Query: 444 VQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVPWPQDRVPRGG 599
+PLRPQRH +RQA Q RPQR+AP HHRH VHQG VRVP + VPRGG
Sbjct: 267 GALPLRPQRHRLRQARQARPQRRAPTRRHHRHPVHQGGVRVPGAEGGVPRGG 422
Score = 102 bits (217), Expect(3) = e-121
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = +1 / +1
Query: 709 GRWAPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVARNVIP 843
GRW MRESWGS+WR+D+NHR+Q PFSIRIRNESGKTLVARNVIP
Sbjct: 529 GRWTRMRESWGSIWRLDSNHRLQAPFSIRIRNESGKTLVARNVIP 663
Score = 79.9 bits (168), Expect(4) = 5e-044
Identities = 37/53 (69%), Positives = 40/53 (75%)
Frame = -1 / -1
Query: 624 REVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
R V LLHVEP L+ RELARHPGELDVDDA V+ELVV AGLG+ AE AA
Sbjct: 447 RHVHRVGPLLHVEPHLQPRELARHPGELDVDDAGVSELVVAAGLGELAEGGAA 289
Score = 70.3 bits (147), Expect(3) = 2e-076
Identities = 30/45 (66%), Positives = 31/45 (68%)
Frame = -2 / -2
Query: 842 GMTFLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGAQRP 708
GMT ATSV PDSLRMRME G RWL S RQ +P DSRI RP
Sbjct: 662 GMTLRATSVXPDSLRMRMENGAWRRWLESRRQMDPHDSRIRVHRP 528
Score = 62.0 bits (129), Expect(4) = 5e-044
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -1 / -1
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
PPGA VL A +LVA AA+LAVLEQ LV+AG HGHE V V VLE
Sbjct: 225 PPGARLVLRALDLVACAAALAVLEQRLVAAGGHGHERVPVHVLE 94
Score = 60.2 bits (125), Expect(4) = 5e-044
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = -1 / -1
Query: 840 DDVPGDERLAGLVADADGEGRLHAVVGVHAPD 745
DDV GDERL GLVADADGE RL +VGV APD
Sbjct: 660 DDVAGDERLXGLVADADGEWRLETMVGVEAPD 565
Score = 37.7 bits (76), Expect(3) = 2e-076
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3 / -2
Query: 892 SCTGRRSGRRCWASSWPG 839
+CTGR SGRRCW SS+ G
Sbjct: 713 TCTGRWSGRRCWXSSFXG 660
Score = 37.3 bits (75), Expect(3) = e-121
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +1 / +2
Query: 841 PANWRPNTFYRSFVQY 888
P NWR NTFYRS VQY
Sbjct: 662 PKNWRXNTFYRSIVQY 709
Score = 33.6 bits (67), Expect(3) = 2e-048
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3 / +1
Query: 840 PGQLEAQHLLPLLRPVQL 893
P +LE QHLLPL RPVQ+
Sbjct: 661 PXKLEXQHLLPLHRPVQV 714
Score = 32.7 bits (65), Expect(4) = 5e-044
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 902 LAS*LYWTKER*KVLGLQLAG 840
+ S LYWT ER*KVL LQ G
Sbjct: 723 ILSNLYWTMER*KVLXLQFXG 661
Score = 27.6 bits (54), Expect(3) = 2e-048
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / +3
Query: 804 RVRQDARRQERHP 842
RVR DARR +RHP
Sbjct: 624 RVRXDARRPQRHP 662
>gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P122 5-PRIME, mRNA sequence
Length = 717
Score = 307 bits (665), Expect(2) = e-120
Identities = 123/135 (91%), Positives = 127/135 (94%)
Frame = +1 / +1
Query: 295 FMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGT 474
F SM SCGNQPLFKDGKGCGSCYKIRCRKD SCSGRTETVIITDMNYYPV+ YHFDLSGT
Sbjct: 1 FASMTSCGNQPLFKDGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAPYHFDLSGT 180
Query: 475 AFGRLAKSGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDG 654
AFGRLAK GLND+LRHSGIIDIEFTRVPCEFPGLKIGFHVEEYS+PVYFAVLVEYEDGDG
Sbjct: 181 AFGRLAKPGLNDRLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDG 360
Query: 655 DVVQVDLMESKTARG 699
DVVQVDLMES+ G
Sbjct: 361 DVVQVDLMESRGPGG 405
Score = 220 bits (475), Expect(2) = 7e-083
Identities = 98/133 (73%), Positives = 99/133 (74%)
Frame = -2 / -2
Query: 698 PRAVLDSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEW 519
P DS+R TAK*TG EYSSTWNPIL PGNSHGT VNSMSMMPEW
Sbjct: 404 PPGPRDSMRSTCTTSPSPSSYSTSTAK*TGFEYSSTWNPILSPGNSHGTRVNSMSMMPEW 225
Query: 518 RSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLP 339
RSLSL P ASLPNAVPLRSKW TG**FMSVMITVSV PEQD SFLH IL* EPHPLP
Sbjct: 224 RSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMITVSVLPEQDWSFLHLIL*HEPHPLP 45
Query: 338 SLNNGWFPQEPMD 300
SLNNGW PQE MD
Sbjct: 44 SLNNGWLPQEVMD 6
Score = 208 bits (449), Expect(2) = 6e-066
Identities = 84/103 (81%), Positives = 90/103 (87%)
Frame = +3 / +3
Query: 300 VHGLLRKPAIVQGRQGMRLLLQDSVQEGPVLLRADGDGDHHRHELLPGVQVPLRPQRHGV 479
VH LLR+PAIVQGRQGMRL+LQD +QEGP+LLR DGDGDHHRHELLPG +PLRPQRH V
Sbjct: 6 VHDLLRQPAIVQGRQGMRLMLQDQMQEGPILLRQDGDGDHHRHELLPGGALPLRPQRHSV 185
Query: 480 RQAGQVRPQRQAPPLGHHRHRVHQGAVRVPWPQDRVPRGGVLE 608
RQA + R QRQAPPL HHRHRVH GAVRVP QDRVPRGGVLE
Sbjct: 186 RQARKARAQRQAPPLRHHRHRVHTGAVRVPGAQDRVPRGGVLE 314
Score = 145 bits (312), Expect(2) = e-120
Identities = 56/68 (82%), Positives = 61/68 (89%)
Frame = +1 / +1
Query: 691 ARGPPTGRWAPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVARNVIPANWRPNTFY 870
+RGP G+W MRESWGSVWR+D+NHR+Q PFSIRIRNESGKTLVA VIPANWRPNTFY
Sbjct: 388 SRGPGGGKWTRMRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPNTFY 567
Query: 871 RSFVQYS* 894
RSFVQYS*
Sbjct: 568 RSFVQYS* 591
Score = 108 bits (230), Expect(2) = 7e-083
Identities = 50/66 (75%), Positives = 50/66 (75%)
Frame = -2 / -2
Query: 890 LYWTKER*KVLGLQLAGMTFLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGAQR 711
LY TKER*KVLGLQLAGMT LATSVLPDSLRMRME G RWL S RQTEP DS I
Sbjct: 587 LYCTKER*KVLGLQLAGMTLLATSVLPDSLRMRMENGAWRRWLESRRQTEPHDSLILVHF 408
Query: 710 PVGGPR 693
P GPR
Sbjct: 407 PPPGPR 390
Score = 97.3 bits (206), Expect(3) = 3e-047
Identities = 44/53 (83%), Positives = 45/53 (84%)
Frame = -1 / -1
Query: 624 REVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
REVDG RVLLHVEPDLE RELARHP ELDVDDA VAE VVE GL +PAER AA
Sbjct: 330 REVDGVRVLLHVEPDLEPRELARHPCELDVDDAGVAEPVVEPGLCEPAERCAA 172
Score = 71.6 bits (150), Expect(3) = 3e-047
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -3 / -3
Query: 892 SCTGRRSGRRCWASSWPG*RSWRRASCRT 806
SCT RRSGRRCWASSWPG* WRRASCRT
Sbjct: 589 SCTARRSGRRCWASSWPG*PCWRRASCRT 503
Score = 66.6 bits (139), Expect(2) = 6e-066
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +3 / +3
Query: 804 RVRQDARRQERHPGQLEAQHLLPLLRPVQLAS 899
RVRQDARRQ+ HPGQLEAQHLLPLLR VQL S
Sbjct: 501 RVRQDARRQQGHPGQLEAQHLLPLLRAVQLKS 596
Score = 65.7 bits (137), Expect(3) = 1e-031
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -1 / -1
Query: 843 RDDVPGDERLAGLVADADGEGRLHAVVGVHAPD 745
RDD+ GDERLAGLVADADGE RL AVVGV APD
Sbjct: 540 RDDLVGDERLAGLVADADGEWRLEAVVGVEAPD 442
Score = 64.3 bits (134), Expect(3) = 3e-047
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = -1 / -1
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHE 295
P GAG VLPA +LVA AASLAVLEQWLV+AG HG E
Sbjct: 108 PAGAGLVLPASDLVA*AASLAVLEQWLVAAGGHGRE 1
Score = 63.8 bits (133), Expect(3) = 1e-031
Identities = 28/35 (80%), Positives = 28/35 (80%)
Frame = -3 / -3
Query: 556 APW*TRCR*CPSGGACR*GRTWPACRTPCR*GRSG 452
AP *TRCR*C SGGACR* R ACRT CR*GRSG
Sbjct: 262 APV*TRCR*CRSGGACR*ARALRACRTLCR*GRSG 158
Score = 50.6 bits (104), Expect(3) = 1e-031
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = -3 / -3
Query: 376 CTESCSRSRIPCRP*TMAGFRRSPWT 299
C SCS SRIPCRP*TMAG RR WT
Sbjct: 82 CI*SCSMSRIPCRP*TMAGCRRRSWT 5
>gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0003B13f, mRNA sequence
Length = 789
Score = 309 bits (669), Expect(2) = e-109
Identities = 120/154 (77%), Positives = 136/154 (88%)
Frame = +1 / +2
Query: 235 GAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGRTETV 414
GA P DNGGACGFK+ N+YPFM+M SCGNQPLFKDGKGCG+CYKI+C K +CSGR ETV
Sbjct: 2 GARPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETV 181
Query: 415 IITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHV 594
+ITDMNYYPV+ YHFDLSGTAFG+LAK G ND+LRH+GIIDI+FTRV CEFPGLK+GFHV
Sbjct: 182 MITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHV 361
Query: 595 EEYSSPVYFAVLVEYEDGDGDVVQVDLMESKTAR 696
EE S+ VY A+LVEYE+GDGDVVQVDLMES R
Sbjct: 362 EEGSNAVYMAILVEYENGDGDVVQVDLMESGRGR 463
Score = 193 bits (417), Expect(2) = 2e-067
Identities = 91/150 (60%), Positives = 96/150 (64%)
Frame = -2 / -1
Query: 683 DSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSL 504
DS+R A T L+ SSTWNP PGNSH TLVN MSMMP RS SL
Sbjct: 450 DSMRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSL 271
Query: 503 RPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNG 324
RP LASLP AVPLRSKW TG**FMSV+ITVS RPE F+H IL* P PLPSLN+G
Sbjct: 270 RPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSG 91
Query: 323 WFPQEPMDMKGYWLVCLKPHAPPLSSGPAP 234
W PQE M M GY L P APPLS G AP
Sbjct: 90 WLPQEVMAMNGYRFTFLNPQAPPLS*GRAP 1
Score = 176 bits (378), Expect(2) = 8e-044
Identities = 72/112 (64%), Positives = 84/112 (75%)
Frame = +3 / +1
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPVLLRADGDGDHHRHELLPG 443
+R+Q +PVP+H H LLR+PA VQGRQG+R +LQD V E +LRA GDGD H HELLPG
Sbjct: 31 LRVQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQGVLRAAGDGDDHGHELLPG 210
Query: 444 VQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVPWPQDRVPRGG 599
+PLRPQRH +RQA Q RPQR+AP HHRH VHQG VRVP + VPRGG
Sbjct: 211 GALPLRPQRHRLRQARQARPQRRAPTRRHHRHPVHQGGVRVPGAEGGVPRGG 366
Score = 105 bits (225), Expect(2) = e-109
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = +1 / +2
Query: 709 GRWAPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVARNVIPANWRPNTFYRS 876
GRW MRESWG +WR+D+NHR+Q PFSIRIRNESG+TLVAR VIP RPNT Y S
Sbjct: 473 GRWTRMRESWGFIWRLDSNHRLQAPFSIRIRNESGQTLVAR*VIPKKGRPNTLYCS 640
Score = 83.1 bits (175), Expect(2) = 2e-067
Identities = 37/56 (66%), Positives = 38/56 (67%)
Frame = -2 / -1
Query: 875 ER*KVLGLQLAGMTFLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGAQRP 708
E+ KVLGL GMT ATSV PDSLRMRME G C RWL S RQ P DSRI RP
Sbjct: 639 EQYKVLGLPFLGMT*RATSVCPDSLRMRMENGACRRWLESRRQMNPHDSRIRVHRP 472
Score = 79.9 bits (168), Expect(3) = 1e-036
Identities = 37/53 (69%), Positives = 40/53 (75%)
Frame = -1 / -3
Query: 624 REVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
R V LLHVEP L+ RELARHPGELDVDDA V+ELVV AGLG+ AE AA
Sbjct: 391 RHVHRVGPLLHVEPHLQPRELARHPGELDVDDAGVSELVVAAGLGELAEGGAA 233
Score = 62.0 bits (129), Expect(3) = 1e-036
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -1 / -3
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
PPGA VL A +LVA AA+LAVLEQ LV+AG HGHE V V VLE
Sbjct: 169 PPGARLVLRALDLVACAAALAVLEQRLVAAGGHGHERVPVHVLE 38
Score = 50.6 bits (104), Expect(3) = 1e-036
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = -1 / -3
Query: 840 DDVPGDERLAGLVADADGEGRLHAVVGVHAPD 745
DD+ G +RL GLVADADGE RL +VGV APD
Sbjct: 604 DDLAGYKRLPGLVADADGEWRL*TMVGVEAPD 509
Score = 25.4 bits (49), Expect(2) = 8e-044
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3 / +1
Query: 804 RVRQDARRQERHPGQLEAQHLL 869
RVR DA HP + EAQH +
Sbjct: 568 RVRADACSPLSHPQEGEAQHFI 633
>gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010J225 5-PRIME, mRNA sequence
Length = 776
Score = 335 bits (726), Expect(2) = e-108
Identities = 131/168 (77%), Positives = 147/168 (87%)
Frame = +1 / +1
Query: 178 AVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGS 357
AV G ARATWYG PNGAGP DNGGACGFK+ N+YPFM+M SCGNQPLFKDGKGCG+
Sbjct: 118 AVSIGQSGVARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGA 297
Query: 358 CYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIID 537
CYKI+C K +CSGR ETV+ITDMNYYPV+ YHFDLSGTAFG+LAK G ND+LRH+GIID
Sbjct: 298 CYKIKCTKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIID 477
Query: 538 IEFTRVPCEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLME 681
I+FTRV CEFPGLK+GFHVEE S+ VY A+LVEYE+GDGDVVQVDLME
Sbjct: 478 IQFTRVACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLME 621
Score = 220 bits (474), Expect(2) = 2e-064
Identities = 101/149 (67%), Positives = 106/149 (71%)
Frame = -2 / -1
Query: 614 TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG* 435
T L+ SSTWNP PGNSH TLVN MSMMP RS SLRP LASLP AVPLRSKW TG*
Sbjct: 554 TALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG* 375
Query: 434 *FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPP 255
*FMSV+ITVS RPE F+H IL* P PLPSLN+GW PQE M M GY L P APP
Sbjct: 374 *FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPP 195
Query: 254 LSSGPAPLGWPYQVARAFCQGPQYTAASL 168
LS GPAPLG PYQVARA P TA +L
Sbjct: 194 LS*GPAPLGAPYQVARATPDCPMDTAVAL 108
Score = 176 bits (378), Expect = 3e-043
Identities = 72/112 (64%), Positives = 84/112 (75%)
Frame = +3 / +3
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPVLLRADGDGDHHRHELLPG 443
+R+Q +PVP+H H LLR+PA VQGRQG+R +LQD V E +LRA GDGD H HELLPG
Sbjct: 204 LRVQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQGVLRAAGDGDDHGHELLPG 383
Query: 444 VQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVPWPQDRVPRGG 599
+PLRPQRH +RQA Q RPQR+AP HHRH VHQG VRVP + VPRGG
Sbjct: 384 GALPLRPQRHRLRQARQARPQRRAPTRRHHRHPVHQGGVRVPGAEGGVPRGG 539
Score = 79.9 bits (168), Expect(3) = 8e-035
Identities = 37/53 (69%), Positives = 40/53 (75%)
Frame = -1 / -3
Query: 624 REVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
R V LLHVEP L+ RELARHPGELDVDDA V+ELVV AGLG+ AE AA
Sbjct: 564 RHVHRVGPLLHVEPHLQPRELARHPGELDVDDAGVSELVVAAGLGELAEGGAA 406
Score = 78.5 bits (165), Expect(2) = e-108
Identities = 31/49 (63%), Positives = 36/49 (73%)
Frame = +1 / +3
Query: 691 ARGPPTGRWAPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVARNV 837
A G GRW M ESWGS+W +D+ +R+Q P SIRIRNESGK L ARNV
Sbjct: 630 ADGAAAGRWTRMPESWGSIWGLDSXNRLQXPXSIRIRNESGKKLXARNV 776
Score = 62.0 bits (129), Expect(3) = 8e-035
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -1 / -3
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
PPGA VL A +LVA AA+LAVLEQ LV+AG HGHE V V VLE
Sbjct: 342 PPGARLVLRALDLVACAAALAVLEQRLVAAGGHGHERVPVHVLE 211
Score = 47.3 bits (97), Expect(2) = 2e-064
Identities = 23/49 (46%), Positives = 24/49 (48%)
Frame = -2 / -2
Query: 836 TFLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGAQRPVGGPRA 690
T A S PDSLRMRM G R L S Q +P DS RP P A
Sbjct: 775 TLRAXSFXPDSLRMRMXNGXWRRXLESRPQMDPHDSGXRVHRPAAAPSA 629
Score = 44.1 bits (90), Expect(3) = 8e-035
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = -1 / -1
Query: 837 DVPGDERLAGLVADADGEGRLHAVVGVHAPD 745
DV G E L GLVADADG L + GV APD
Sbjct: 776 DVAGXELLXGLVADADGXWXLETIXGVEAPD 684
>gb|BQ465138.1|BQ465138 HU02M06r HU Hordeum vulgare subsp. vulgare cDNA clone HU02M06
5-PRIME, mRNA sequence
Length = 623
Score = 321 bits (695), Expect(3) = e-105
Identities = 124/158 (78%), Positives = 140/158 (88%)
Frame = +1 / +2
Query: 223 GQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRCRKDPSCSGR 402
G PNGAGP DNGGACGFK+ N+YPFM+M SCGNQPLFKDGKGCG+CYKI+C K +CSGR
Sbjct: 11 GAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGR 190
Query: 403 TETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRVPCEFPGLKI 582
ETV+ITDMNYYPV+ YHFDLSGTAFG+LAK G ND+LRH+GIIDI+FTRV CEFPGLK+
Sbjct: 191 QETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKV 370
Query: 583 GFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMESKTAR 696
GFHVEE S+ VY A+LVEYE+GDGDVVQVDLMES R
Sbjct: 371 GFHVEEGSNAVYMAILVEYENGDGDVVQVDLMESGRGR 484
Score = 204 bits (440), Expect(2) = 7e-063
Identities = 95/154 (61%), Positives = 100/154 (64%)
Frame = -2 / -3
Query: 683 DSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSL 504
DS+R A T L+ SSTWNP PGNSH TLVN MSMMP RS SL
Sbjct: 471 DSMRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSL 292
Query: 503 RPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNG 324
RP LASLP AVPLRSKW TG**FMSV+ITVS RPE F+H IL* P PLPSLN+G
Sbjct: 291 RPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSG 112
Query: 323 WFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWP 222
W PQE M M GY L P APPLS GPAPLG P
Sbjct: 111 WLPQEVMAMNGYRFTFLNPQAPPLS*GPAPLGAP 10
Score = 176 bits (378), Expect(2) = 2e-043
Identities = 72/112 (64%), Positives = 84/112 (75%)
Frame = +3 / +1
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPVLLRADGDGDHHRHELLPG 443
+R+Q +PVP+H H LLR+PA VQGRQG+R +LQD V E +LRA GDGD H HELLPG
Sbjct: 52 LRVQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQGVLRAAGDGDDHGHELLPG 231
Query: 444 VQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVPWPQDRVPRGG 599
+PLRPQRH +RQA Q RPQR+AP HHRH VHQG VRVP + VPRGG
Sbjct: 232 GALPLRPQRHRLRQARQARPQRRAPTRRHHRHPVHQGGVRVPGAEGGVPRGG 387
Score = 79.9 bits (168), Expect(3) = 2e-035
Identities = 37/53 (69%), Positives = 40/53 (75%)
Frame = -1 / -2
Query: 624 REVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
R V LLHVEP L+ RELARHPGELDVDDA V+ELVV AGLG+ AE AA
Sbjct: 412 RHVHRVGPLLHVEPHLQPRELARHPGELDVDDAGVSELVVAAGLGELAEGGAA 254
Score = 68.4 bits (143), Expect(3) = e-105
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +1 / +3
Query: 748 WRMDTNHRMQPPFSIRIRNESGKTLVARNV 837
WR+D+NHR+Q PFSIRIRNESGKTLVARNV
Sbjct: 534 WRLDSNHRLQAPFSIRIRNESGKTLVARNV 623
Score = 62.0 bits (129), Expect(3) = 2e-035
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -1 / -2
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
PPGA VL A +LVA AA+LAVLEQ LV+AG HGHE V V VLE
Sbjct: 190 PPGARLVLRALDLVACAAALAVLEQRLVAAGGHGHERVPVHVLE 59
Score = 57.4 bits (119), Expect(2) = 7e-063
Identities = 24/31 (77%), Positives = 26/31 (83%)
Frame = -1 / -1
Query: 837 DVPGDERLAGLVADADGEGRLHAVVGVHAPD 745
DV GDERLAGLVADADGE RL +VGV AP+
Sbjct: 623 DVAGDERLAGLVADADGEWRLETMVGVEAPE 531
Score = 50.6 bits (104), Expect(3) = 2e-035
Identities = 22/30 (73%), Positives = 22/30 (73%)
Frame = -2 / -2
Query: 836 TFLATSVLPDSLRMRMEKGGCMRWLVSMRQ 747
T ATSVLPDSLRMRME G RWL S RQ
Sbjct: 622 TLRATSVLPDSLRMRMENGAWRRWLESRRQ 533
Score = 31.8 bits (63), Expect(3) = e-105
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 709 GRWAPMRESWGSV 747
GRW MRESWGS+
Sbjct: 494 GRWTRMRESWGSI 532
Score = 23.5 bits (45), Expect(2) = 2e-043
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 804 RVRQDARRQER 836
RVRQDARR +R
Sbjct: 590 RVRQDARRPQR 622
>gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B0810 5-PRIME, mRNA sequence
Length = 638
Score = 309 bits (669), Expect(2) = e-104
Identities = 118/139 (84%), Positives = 123/139 (88%)
Frame = +1 / +3
Query: 157 NFNTSEAAVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFK 336
+ N ++A YWGPW ARATWYGQPNGAGPDDNGGACGFKHTNQYPF SM SCGNQPLFK
Sbjct: 105 DLNVTDATKYWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCGNQPLFK 284
Query: 337 DGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKL 516
DGKGCGSCYKIRCRKD SCSGRTETVIITDMNYYPV+ YHFDLSGTAFGRLAK GLND+L
Sbjct: 285 DGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAPYHFDLSGTAFGRLAKPGLNDRL 464
Query: 517 RHSGIIDIEFTRVPCEFPG 573
RHSGIIDIEFTR PG
Sbjct: 465 RHSGIIDIEFTRGAVGVPG 521
Score = 257 bits (555), Expect(2) = 6e-079
Identities = 109/138 (78%), Positives = 111/138 (80%)
Frame = -2 / -2
Query: 572 PGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPE 393
PG VNSMSMMPEWRSLSL P ASLPNAVPLRSKW TG**FMSVMITVSV PE
Sbjct: 520 PGTPTAPRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMITVSVLPE 341
Query: 392 QDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQV 213
QD SFLH IL* EPHPLPSLNNGW PQE MD GYWLVCLKP APPLSSGPAPLGWPYQV
Sbjct: 340 QDWSFLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCLKPQAPPLSSGPAPLGWPYQV 161
Query: 212 ARAFCQGPQYTAASLVLK 159
A A QGPQY AS+ L+
Sbjct: 160 ALAGVQGPQYLVASVTLR 107
Score = 213 bits (460), Expect(2) = 7e-060
Identities = 87/124 (70%), Positives = 95/124 (76%)
Frame = +3 / +2
Query: 183 VLGPLAEGPGHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLL 362
VLG L G G LV WC+RLQAHQPVP+ VH LLR+PAIVQGRQGMRL+L
Sbjct: 131 VLGTLDPGQGDLVRPAQWRRPRRQRWCLRLQAHQPVPVRVHDLLRQPAIVQGRQGMRLML 310
Query: 363 QDSVQEGPVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHR 542
QD +QEGP+LLR DGDGDHHRHELLPG +PLRPQRH VRQA + R QRQAPPL HHRHR
Sbjct: 311 QDQMQEGPILLRQDGDGDHHRHELLPGGALPLRPQRHSVRQARKARAQRQAPPLRHHRHR 490
Query: 543 VHQG 554
VH G
Sbjct: 491 VHTG 502
Score = 90.4 bits (191), Expect(2) = e-104
Identities = 37/45 (82%), Positives = 39/45 (86%)
Frame = +1 / +1
Query: 553 VPCEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMESK 687
VP EFPGLKIGFHV EYS PVYFAVLV +DGDGDVVQV LMES+
Sbjct: 502 VPWEFPGLKIGFHVXEYSXPVYFAVLVXXQDGDGDVVQVXLMESR 636
Score = 77.6 bits (163), Expect(3) = 1e-036
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = -1 / -1
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
P GAG VLPA +LVA AASLAVLEQWLV+AG HG E VLVGVLE
Sbjct: 350 PAGAGLVLPASDLVA*AASLAVLEQWLVAAGGHGRERVLVGVLE 219
Score = 62.0 bits (129), Expect(3) = 1e-036
Identities = 27/34 (79%), Positives = 27/34 (79%)
Frame = -3 / -3
Query: 553 PW*TRCR*CPSGGACR*GRTWPACRTPCR*GRSG 452
P *TRCR*C SGGACR* R ACRT CR*GRSG
Sbjct: 501 PV*TRCR*CRSGGACR*ARALRACRTLCR*GRSG 400
Score = 58.3 bits (121), Expect(2) = 6e-079
Identities = 28/44 (63%), Positives = 29/44 (65%)
Frame = -2 / -1
Query: 683 DSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGT 552
DS+R TAK*TG EYS TWNPIL PGNSHGT
Sbjct: 632 DSMRXTCTTSPSPSXXSTSTAK*TGXEYSXTWNPILSPGNSHGT 501
Score = 52.8 bits (109), Expect(3) = 1e-036
Identities = 21/25 (84%), Positives = 21/25 (84%)
Frame = -1 / -3
Query: 624 REVDGARVLLHVEPDLEARELARHP 550
REVDG RVL HVEPDLE REL RHP
Sbjct: 573 REVDGXRVLXHVEPDLEPRELPRHP 499
Score = 38.2 bits (77), Expect(2) = 7e-060
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +2 / +2
Query: 575 SRSGSTWRSTRAPSTSR 625
SRSGSTW STR PSTSR
Sbjct: 524 SRSGSTWXSTRXPSTSR 574
>gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0018F10f, mRNA sequence
Length = 669
Score = 344 bits (746), Expect(2) = e-104
Identities = 130/165 (78%), Positives = 148/165 (89%)
Frame = +1 / +3
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W+ ARATWYG P GAGP D+GGACGFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 84 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 263
Query: 376 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRV 555
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AK GL++KLRHSGIIDI+F RV
Sbjct: 264 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 443
Query: 556 PCEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMESKT 690
PCEFPGLK+ FHVE+ S+PVYFAVLVEYEDGDGD+VQVDLME+ +
Sbjct: 444 PCEFPGLKVTFHVEQGSNPVYFAVLVEYEDGDGDLVQVDLMEANS 578
Score = 234 bits (505), Expect(2) = 4e-066
Identities = 106/164 (64%), Positives = 113/164 (68%)
Frame = -2 / -3
Query: 686 LDSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLS 507
L S+R TAK TG + STW LRPGNSHGTL+N MSMMPE RS S
Sbjct: 574 LASMRSTCTKSPSPSSYSTSTAKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFS 395
Query: 506 LRPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNN 327
LRP LA PNAVPLRSKWYL TG**FMSVM TVS PEQD S +HRI *QEPHPLPSL
Sbjct: 394 LRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKM 215
Query: 326 GWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQVARAFCQ 195
G P + M+ KGYWLV L PHAPP S GPAP+G PYQVA A Q
Sbjct: 214 GSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 83
Score = 194 bits (419), Expect = 7e-049
Identities = 80/133 (60%), Positives = 94/133 (70%)
Frame = +3 / +2
Query: 210 GHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPV 389
GHLV WCVR+Q HQPVPL +H ++R+ A +QG QGMRLLL D+V + PV
Sbjct: 98 GHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRPV 277
Query: 390 LLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVP 569
LLR GDG HHRHELLPG QVPLRP+ H VR+ GQ RPQR+AP L HHRH V + AVRVP
Sbjct: 278 LLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESAVRVP 457
Query: 570 WPQDRVPRGGVLE 608
W Q +PRG +E
Sbjct: 458 WSQGDLPRGAGVE 496
Score = 72.1 bits (151), Expect(2) = 4e-026
Identities = 35/51 (68%), Positives = 36/51 (70%)
Frame = -1 / -2
Query: 621 EVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRA 469
EV R LLHVE LE RELARH ELDVDDA V EL+ EAGLG AER A
Sbjct: 509 EVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 357
Score = 66.6 bits (139), Expect(2) = 4e-026
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1 / -2
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V+ AP LVAGAASLA+LE LV+A HG EGVLVGVLE
Sbjct: 284 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 159
Score = 54.7 bits (113), Expect(2) = e-104
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +1 / +1
Query: 688 TARGPPTGRWAPMRESWGSVWRMDTNHRMQPPFSI 792
T+ P R PMRESWGS+WR+++ HR+Q PFS+
Sbjct: 559 TSWRPTPVRGTPMRESWGSIWRVESGHRLQAPFSM 663
Score = 38.6 bits (78), Expect(2) = 4e-066
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / -2
Query: 791 MEKGGCMRWLVSMRQTEPQDSRIGAQR 711
MEKG RW S RQ +P DSRIG R
Sbjct: 662 MEKGAWRRWPDSTRQIDPHDSRIGVPR 582
>gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009C23f, mRNA sequence
Length = 762
Score = 340 bits (736), Expect(2) = e-104
Identities = 132/169 (78%), Positives = 143/169 (84%)
Frame = +1 / +3
Query: 169 SEAAVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKG 348
+ A Y W ARATWYG PNGAGPDDNGGACGFKH NQYPF SM SCGNQPLFKDGKG
Sbjct: 162 TSAVSYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGNQPLFKDGKG 341
Query: 349 CGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSG 528
CGSCY+IRC D SCSG ETV+ITDMNYYPV++YHFDLSGTAFG LAKSGLN+KLRHSG
Sbjct: 342 CGSCYQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSG 521
Query: 529 IIDIEFTRVPCEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDL 675
IIDI+F RVPC FPGLKI FHV E S+ VY AVL+EYED DGDV+QVD+
Sbjct: 522 IIDIQFRRVPCNFPGLKINFHVVEGSNAVYLAVLIEYEDMDGDVIQVDM 668
Score = 248 bits (535), Expect(2) = 5e-069
Identities = 105/140 (75%), Positives = 112/140 (80%)
Frame = -2 / -3
Query: 623 AK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLD 444
A+ T LE S+TW ILRPG HGTL+N MSMMPEWRS SLRPDLA P AVPLRSKWY
Sbjct: 616 ARYTALEPSTTWKLILRPGKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWA 437
Query: 443 TG**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPH 264
TG**FMSV+ITVS+ PEQ+ S LHRI *QEP PLPSLN GW PQE M+ KGYW CLKP
Sbjct: 436 TG**FMSVIITVSMLPEQERSPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFTCLKPQ 257
Query: 263 APPLSSGPAPLGWPYQVARA 204
APPLSSGPAPLG PYQVA A
Sbjct: 256 APPLSSGPAPLGAPYQVALA 197
Score = 192 bits (413), Expect(2) = 3e-049
Identities = 81/138 (58%), Positives = 100/138 (72%)
Frame = +3 / +2
Query: 195 LAEGPGHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSV 374
+A G LV +RLQA +PVPL +H LLR+PA VQGRQG+RLLL D++
Sbjct: 188 VAPGQSDLVRSAQRRRARRQRRRLRLQAREPVPLLLHDLLRQPAPVQGRQGLRLLLPDTM 367
Query: 375 QEGPVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQG 554
Q P+LLR DGD HRHELLPG VPL P+RHG+R+ GQV PQR+APPLGHHRH V +G
Sbjct: 368 QRRPLLLRQHRDGDDHRHELLPGRPVPL*PERHGLRRPGQVGPQREAPPLGHHRHPVQEG 547
Query: 555 AVRVPWPQDRVPRGGVLE 608
AV++P PQD++PRGG L+
Sbjct: 548 AVQLPRPQDQLPRGGGLQ 601
Score = 80.3 bits (169), Expect(2) = 7e-028
Identities = 38/53 (71%), Positives = 41/53 (77%)
Frame = -1 / -2
Query: 624 REVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
R+V L HVE DLEA E+ARHP ELDVDDARVAEL+VEA LGQ AE RAA
Sbjct: 617 RQVHRVGALHHVEVDLEAGEVARHPPELDVDDARVAELLVEARLGQGAEGRAA 459
Score = 64.3 bits (134), Expect(2) = 7e-028
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = -1 / -2
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V A LVAGAA+LAVLEQ LV+AG HG EGVLV VLE
Sbjct: 389 GAGAVAAASYLVAGAAALAVLEQGLVAAGGHGGEGVLVHVLE 264
Score = 58.8 bits (122), Expect(2) = e-104
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +1 / +3
Query: 694 RGPPTGRWAPMRESWGSVWRMDTNHRMQPP 783
+G +G W MRESWGS+WRMD+NHR+Q P
Sbjct: 669 KGANSGSWMAMRESWGSIWRMDSNHRLQGP 758
Score = 34.5 bits (69), Expect(2) = 5e-069
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2 / -3
Query: 785 KGGCMRWLVSMRQTEPQDSRIGAQRPVGGP 696
KG RWL S+RQ +P DSRI P P
Sbjct: 760 KGP*SRWLESIRQMDPHDSRIAIHDPELAP 671
Score = 24.4 bits (47), Expect(2) = 3e-049
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2 / +1
Query: 725 CASPGAPSGAW 757
CAS G PSG W
Sbjct: 700 CASRGDPSGGW 732
>gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005E06f, mRNA sequence
Length = 796
Score = 338 bits (732), Expect(2) = e-103
Identities = 129/170 (75%), Positives = 146/170 (85%)
Frame = +1 / +1
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W+ ARATWYG P GAGP D+GGACGFK+TNQYPF SMG GN P+FKDGKGCGSCY+IRC
Sbjct: 67 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMGGGGNXPIFKDGKGCGSCYQIRC 246
Query: 376 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRV 555
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AK GL++KLRHSGIIDI+F RV
Sbjct: 247 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 426
Query: 556 PCEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMESKTARGPP 705
PCEFPGLK+ FHVE+ S+PVYFAVLVEY DGDGD+VQVDLME+ + P
Sbjct: 427 PCEFPGLKVTFHVEQGSNPVYFAVLVEYXDGDGDMVQVDLMEANSCTWTP 576
Score = 237 bits (511), Expect(2) = 2e-064
Identities = 107/164 (65%), Positives = 113/164 (68%)
Frame = -2 / -3
Query: 686 LDSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLS 507
L S+R TAK TG + STW LRPGNSHGTL+N MSMMPE RS S
Sbjct: 557 LASMRSTCTMSPSPSSYSTSTAKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFS 378
Query: 506 LRPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNN 327
LRP LA PNAVPLRSKWYL TG**FMSVM TVS PEQD S +HRI *QEPHPLPSL
Sbjct: 377 LRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKM 198
Query: 326 GWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQVARAFCQ 195
G P PM+ KGYWLV L PHAPP S GPAP+G PYQVA A Q
Sbjct: 197 GXLPPPPMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 66
Score = 193 bits (415), Expect = 2e-048
Identities = 81/133 (60%), Positives = 93/133 (69%)
Frame = +3 / +3
Query: 210 GHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPV 389
GHLV WCVR+Q HQPVPL +HG R+ A +QG QGMRLLL D+V + PV
Sbjct: 81 GHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHGGGRQXAHLQGWQGMRLLLPDTVHQRPV 260
Query: 390 LLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVP 569
LLR GDG HHRHELLPG QVPLRP+ H VR+ GQ RPQR+AP L HHRH V + AVRVP
Sbjct: 261 LLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESAVRVP 440
Query: 570 WPQDRVPRGGVLE 608
W Q +PRG +E
Sbjct: 441 WSQGDLPRGAGVE 479
Score = 72.1 bits (151), Expect(2) = 6e-026
Identities = 35/51 (68%), Positives = 36/51 (70%)
Frame = -1 / -2
Query: 621 EVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRA 469
EV R LLHVE LE RELARH ELDVDDA V EL+ EAGLG AER A
Sbjct: 492 EVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 340
Score = 66.1 bits (138), Expect(2) = 6e-026
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1 / -2
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V+ AP LVAGAASLA+LE LV+A HG EGVLVGVLE
Sbjct: 267 GAGLVVGAPYLVAGAASLAILEDGLVAAPPHGGEGVLVGVLE 142
Score = 58.8 bits (122), Expect(2) = e-103
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +1 / +1
Query: 715 WAPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVARNVIP 843
W PMRESWGS+ R+D+ H +PP S + NE G+ L R P
Sbjct: 568 WTPMRESWGSILRLDSGHGWRPPLSFALXNEGGRELGGRQGDP 696
Score = 29.9 bits (59), Expect(2) = 2e-064
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2 / -3
Query: 821 SVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIG 720
S LP S +KGG S R+ +P DSRIG
Sbjct: 674 SSLPPSXLNANDKGGLQPCPESSRKIDPHDSRIG 573
>gb|BI960089.1|BI960089 HVSMEn0023C15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023C15f, mRNA sequence
Length = 646
Score = 370 bits (803), Expect = e-102
Identities = 141/158 (89%), Positives = 147/158 (93%)
Frame = +1 / +2
Query: 157 NFNTSEAAVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFK 336
+ N ++A YWGPW ARATWYGQPNGAGPDDNGGACGFKHTNQYPF SM SCGNQPLFK
Sbjct: 173 DLNVTDATKYWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCGNQPLFK 352
Query: 337 DGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKL 516
DGKGCGSCYKIRCRKD SCSGRTETVIITDMNYYPV+ YHFDLSGTAFGRLAK GLND+L
Sbjct: 353 DGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAPYHFDLSGTAFGRLAKPGLNDRL 532
Query: 517 RHSGIIDIEFTRVPCEFPGLKIGFHVEEYSSPVYFAVL 630
RHSGIIDIEFTRVPCEFPGLKIGFHVEEYS+PVYFAVL
Sbjct: 533 RHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVL 646
Score = 307 bits (665), Expect = 8e-083
Identities = 129/155 (83%), Positives = 131/155 (84%)
Frame = -2 / -2
Query: 623 AK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLD 444
AK*TG EYSSTWNPIL PGNSHGT VNSMSMMPEWRSLSL P ASLPNAVPLRSKW
Sbjct: 639 AK*TGFEYSSTWNPILSPGNSHGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GA 460
Query: 443 TG**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPH 264
TG**FMSVMITVSV PEQD SFLH IL* EPHPLPSLNNGW PQE MD GYWLVCLKP
Sbjct: 459 TG**FMSVMITVSVLPEQDWSFLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCLKPQ 280
Query: 263 APPLSSGPAPLGWPYQVARAFCQGPQYTAASLVLK 159
APPLSSGPAPLGWPYQVA A QGPQY AS+ L+
Sbjct: 279 APPLSSGPAPLGWPYQVALAGVQGPQYLVASVTLR 175
Score = 252 bits (545), Expect = 3e-066
Identities = 104/142 (73%), Positives = 113/142 (79%)
Frame = +3 / +1
Query: 183 VLGPLAEGPGHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLL 362
VLGPL G G LV WC+RLQAHQPVP+ VH LLR+PAIVQGRQGMRL+L
Sbjct: 199 VLGPLDPGQGDLVWPAQWRRPRRQRWCLRLQAHQPVPVRVHDLLRQPAIVQGRQGMRLML 378
Query: 363 QDSVQEGPVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHR 542
QD +QEGP+LLR DGDGDH+RHELLPG +PLRPQRHGVRQA + R QRQAPPL HHRHR
Sbjct: 379 QDQMQEGPILLRQDGDGDHYRHELLPGGALPLRPQRHGVRQARKARAQRQAPPLRHHRHR 558
Query: 543 VHQGAVRVPWPQDRVPRGGVLE 608
VH GAVRVP QDRVPRGGVLE
Sbjct: 559 VHTGAVRVPGAQDRVPRGGVLE 624
Score = 100 bits (214), Expect(2) = 6e-038
Identities = 45/53 (84%), Positives = 46/53 (86%)
Frame = -1 / -1
Query: 624 REVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
REVDG RVLLHVEPDLE RELARHP ELDVDDA VAE VVE GL +PAERRAA
Sbjct: 640 REVDGVRVLLHVEPDLEPRELARHPCELDVDDAGVAEPVVEPGLCEPAERRAA 482
Score = 77.6 bits (163), Expect(2) = 6e-038
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = -1 / -1
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
P GAG VLPA +LVA AASLAVLEQWLV+AG HG E VLVGVLE
Sbjct: 418 PAGAGLVLPASDLVA*AASLAVLEQWLVAAGGHGRERVLVGVLE 287
Score = 69.3 bits (145), Expect(2) = 8e-026
Identities = 28/36 (77%), Positives = 28/36 (77%)
Frame = -3 / -3
Query: 376 CTESCSRSRIPCRP*TMAGFRRSPWT*RGTGWCA*S 269
C SCS SRIPCRP*TMAG RR WT GTGWCA*S
Sbjct: 392 CI*SCSMSRIPCRP*TMAGCRRRSWTRTGTGWCA*S 285
Score = 68.4 bits (143), Expect(2) = 8e-026
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = -3 / -3
Query: 556 APW*TRCR*CPSGGACR*GRTWPACRTPCR*GRSG 452
AP *TRCR*C SGGACR* R ACRTPCR*GRSG
Sbjct: 572 APV*TRCR*CRSGGACR*ARALRACRTPCR*GRSG 468
>gb|BM372935.2|BM372935 EBma04_SQ002_H04_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_H04 5', mRNA sequence
Length = 612
Score = 357 bits (774), Expect = 7e-098
Identities = 135/152 (88%), Positives = 141/152 (92%)
Frame = +1 / +2
Query: 157 NFNTSEAAVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFK 336
+ N ++A YWGPW ARATWYGQPNGAGPDDNGGACGFKHTNQYPF SM SCGNQPLFK
Sbjct: 155 DLNVTDATKYWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCGNQPLFK 334
Query: 337 DGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKL 516
DGKGCGSCYKIRCRKD SCSGRTETVIITDMNYYPV+ YHFDLSGTAFGRLAK GLND+L
Sbjct: 335 DGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAPYHFDLSGTAFGRLAKPGLNDRL 514
Query: 517 RHSGIIDIEFTRVPCEFPGLKIGFHVEEYSSP 612
RHSGIIDIEFTRVPCEFPGLKIGFHVEEYS+P
Sbjct: 515 RHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNP 610
Score = 303 bits (655), Expect = 2e-081
Identities = 126/152 (82%), Positives = 128/152 (84%)
Frame = -2 / -1
Query: 614 TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG* 435
TG EYSSTWNPIL PGNSHGT VNSMSMMPEWRSLSL P ASLPNAVPLRSKW TG*
Sbjct: 612 TGFEYSSTWNPILSPGNSHGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG* 433
Query: 434 *FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPP 255
*FMSVMITVSV PEQD SFLH IL* EPHPLPSLNNGW PQE MD GYWLVCLKP APP
Sbjct: 432 *FMSVMITVSVLPEQDWSFLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCLKPQAPP 253
Query: 254 LSSGPAPLGWPYQVARAFCQGPQYTAASLVLK 159
LSSGPAPLGWPYQVA A QGPQY AS+ L+
Sbjct: 252 LSSGPAPLGWPYQVALAGVQGPQYLVASVTLR 157
Score = 249 bits (538), Expect = 3e-065
Identities = 103/142 (72%), Positives = 111/142 (78%)
Frame = +3 / +1
Query: 183 VLGPLAEGPGHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLL 362
VLG L G G LV WC+RLQAHQPVP+ VH LLR+PAIVQGRQGMRL+L
Sbjct: 181 VLGTLDPGQGDLVRPAQWRRPRRQRWCLRLQAHQPVPVRVHDLLRQPAIVQGRQGMRLML 360
Query: 363 QDSVQEGPVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHR 542
QD +QEGP+LLR DGDGDHHRHELLPG +PLRPQRH VRQA + R QRQAPPL HHRHR
Sbjct: 361 QDQMQEGPILLRQDGDGDHHRHELLPGGALPLRPQRHSVRQARKARAQRQAPPLRHHRHR 540
Query: 543 VHQGAVRVPWPQDRVPRGGVLE 608
VH GAVRVP QDRVPRGGVLE
Sbjct: 541 VHTGAVRVPGAQDRVPRGGVLE 606
Score = 88.1 bits (186), Expect(2) = 4e-034
Identities = 40/49 (81%), Positives = 41/49 (83%)
Frame = -1 / -3
Query: 612 GARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
G RVLLHVEPDLE RELARHP ELDVDDA VAE VVE GL +PAER AA
Sbjct: 610 GVRVLLHVEPDLEPRELARHPCELDVDDAGVAEPVVEPGLCEPAERCAA 464
Score = 77.6 bits (163), Expect(2) = 4e-034
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = -1 / -3
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
P GAG VLPA +LVA AASLAVLEQWLV+AG HG E VLVGVLE
Sbjct: 400 PAGAGLVLPASDLVA*AASLAVLEQWLVAAGGHGRERVLVGVLE 269
Score = 69.3 bits (145), Expect(2) = 2e-024
Identities = 28/36 (77%), Positives = 28/36 (77%)
Frame = -3 / -2
Query: 376 CTESCSRSRIPCRP*TMAGFRRSPWT*RGTGWCA*S 269
C SCS SRIPCRP*TMAG RR WT GTGWCA*S
Sbjct: 374 CI*SCSMSRIPCRP*TMAGCRRRSWTRTGTGWCA*S 267
Score = 63.8 bits (133), Expect(2) = 2e-024
Identities = 28/35 (80%), Positives = 28/35 (80%)
Frame = -3 / -2
Query: 556 APW*TRCR*CPSGGACR*GRTWPACRTPCR*GRSG 452
AP *TRCR*C SGGACR* R ACRT CR*GRSG
Sbjct: 554 APV*TRCR*CRSGGACR*ARALRACRTLCR*GRSG 450
>gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. vulgare cDNA clone HV14A15
5-PRIME, mRNA sequence
Length = 616
Score = 338 bits (732), Expect(2) = 3e-095
Identities = 133/173 (76%), Positives = 149/173 (86%)
Frame = +1 / +1
Query: 178 AVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGS 357
AV G ARATWYG PNGAGP DNGGACGFK+ N+YPFM+M SCGNQPLFKDGKGCG+
Sbjct: 49 AVSIGQSGVARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGA 228
Query: 358 CYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIID 537
CYKI+C K +CSGR ETV+ITDMNYYPV+ YHFDLSGTAFG+LAK G ND+LRH+GIID
Sbjct: 229 CYKIKCTKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIID 408
Query: 538 IEFTRVPCEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMESKTAR 696
I+FTRV CEFPGLK+GFHVEE S+ VY A+LVEYE+GDGDVVQVDLMES R
Sbjct: 409 IQFTRVACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLMESGRGR 567
Score = 222 bits (479), Expect = 4e-057
Identities = 105/172 (61%), Positives = 111/172 (64%)
Frame = -2 / -3
Query: 683 DSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSL 504
DS+R A T L+ SSTWNP PGNSH TLVN MSMMP RS SL
Sbjct: 554 DSMRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSL 375
Query: 503 RPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNG 324
RP LASLP AVPLRSKW TG**FMSV+ITVS RPE F+H IL* P PLPSLN+G
Sbjct: 374 RPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSG 195
Query: 323 WFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQVARAFCQGPQYTAASL 168
W PQE M M GY L P APPLS GPAPLG PYQVARA P TA +L
Sbjct: 194 WLPQEVMAMNGYRFTFLNPQAPPLS*GPAPLGAPYQVARATPDCPMDTAVAL 39
Score = 176 bits (378), Expect = 3e-043
Identities = 72/112 (64%), Positives = 84/112 (75%)
Frame = +3 / +3
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPVLLRADGDGDHHRHELLPG 443
+R+Q +PVP+H H LLR+PA VQGRQG+R +LQD V E +LRA GDGD H HELLPG
Sbjct: 135 LRVQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQGVLRAAGDGDDHGHELLPG 314
Query: 444 VQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVPWPQDRVPRGG 599
+PLRPQRH +RQA Q RPQR+AP HHRH VHQG VRVP + VPRGG
Sbjct: 315 GALPLRPQRHRLRQARQARPQRRAPTRRHHRHPVHQGGVRVPGAEGGVPRGG 470
Score = 79.9 bits (168), Expect(2) = 5e-027
Identities = 37/53 (69%), Positives = 40/53 (75%)
Frame = -1 / -2
Query: 624 REVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
R V LLHVEP L+ RELARHPGELDVDDA V+ELVV AGLG+ AE AA
Sbjct: 495 RHVHRVGPLLHVEPHLQPRELARHPGELDVDDAGVSELVVAAGLGELAEGGAA 337
Score = 62.0 bits (129), Expect(2) = 5e-027
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -1 / -2
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
PPGA VL A +LVA AA+LAVLEQ LV+AG HGHE V V VLE
Sbjct: 273 PPGARLVLRALDLVACAAALAVLEQRLVAAGGHGHERVPVHVLE 142
Score = 31.8 bits (63), Expect(2) = 3e-095
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 709 GRWAPMRESWGSV 747
GRW MRESWGS+
Sbjct: 577 GRWTRMRESWGSI 615
>gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092D24f, mRNA sequence
Length = 901
Score = 271 bits (586), Expect(3) = 5e-095
Identities = 101/128 (78%), Positives = 113/128 (88%)
Frame = +1 / +1
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W+ ARATWYG P GAGP D+GGACGFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 106 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 285
Query: 376 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRV 555
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AK GL++KLRHSGIIDI+F RV
Sbjct: 286 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 465
Query: 556 PCEFPGLK 579
PCEFP LK
Sbjct: 466 PCEFPCLK 489
Score = 214 bits (462), Expect(2) = 8e-057
Identities = 94/128 (73%), Positives = 99/128 (77%)
Frame = -2 / -3
Query: 578 LRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVR 399
LR GNSHGTL+N MSMMPE RS SLRP LA PNAVPLRSKWYL TG**FMSVM TVS
Sbjct: 488 LRQGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGL 309
Query: 398 PEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPY 219
PEQD S +HRI *QEPHPLPSL G P + M+ KGYWLV L PHAPP S GPAP+G PY
Sbjct: 308 PEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPY 129
Query: 218 QVARAFCQ 195
QVA A Q
Sbjct: 128 QVALASSQ 105
Score = 180 bits (387), Expect = 2e-044
Identities = 75/123 (60%), Positives = 87/123 (70%)
Frame = +3 / +3
Query: 210 GHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPV 389
GHLV WCVR+Q HQPVPL +H ++R+ A +QG QGMRLLL D+V + PV
Sbjct: 120 GHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRPV 299
Query: 390 LLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVP 569
LLR GDG HHRHELLPG QVPLRP+ H VR+ GQ RPQR+AP L HHRH V + AVRVP
Sbjct: 300 LLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESAVRVP 479
Query: 570 WPQ 578
Q
Sbjct: 480 LSQ 488
Score = 66.6 bits (139), Expect(2) = 1e-021
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1 / -2
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V+ AP LVAGAASLA+LE LV+A HG EGVLVGVLE
Sbjct: 306 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 181
Score = 60.2 bits (125), Expect(3) = 5e-095
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +1 / +3
Query: 568 PGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQ 666
P ++ FHVE+ S+PVYFAVL EYEDGDGDVVQ
Sbjct: 477 PLSQVTFHVEQXSNPVYFAVLGEYEDGDGDVVQ 575
Score = 57.0 bits (118), Expect(3) = 5e-095
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +1 / +3
Query: 697 GPPTGRWAPMRESWGSVWRMDTNHRMQPPFS 789
G G W PMRESWGS+W +D HR+Q PFS
Sbjct: 588 GANFGTWTPMRESWGSIWGLDFGHRLQAPFS 680
Score = 57.0 bits (118), Expect(2) = 1e-021
Identities = 24/34 (70%), Positives = 24/34 (70%)
Frame = -3 / -1
Query: 547 *TRCR*CPSGGACR*GRTWPACRTPCR*GRSGTW 446
*T CR*C S GA R*GR WP RT C GRSGTW
Sbjct: 457 *TGCR*CRSAGASR*GRAWPWRRTRCHSGRSGTW 356
Score = 27.2 bits (53), Expect(2) = 8e-057
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2 / -1
Query: 788 EKGGCMRWLVSMRQTEPQDSRIGAQRPVGGP 696
EKG R S Q +P DSRIG P P
Sbjct: 679 EKGA*SRCPKSSPQMDPHDSRIGVHVPKLAP 587
>gb|BI957582.1|BI957582 HVSMEn0010D14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010D14f, mRNA sequence
Length = 628
Score = 341 bits (740), Expect = 4e-093
Identities = 130/150 (86%), Positives = 136/150 (90%)
Frame = +1 / +1
Query: 145 AGAENFNTSEAAVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQ 324
AG + N ++A YWGPW ARATWYGQPNGAGPDDNGGACGFKHTNQYPF SM SCGNQ
Sbjct: 163 AGDVDLNVTDATKYWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCGNQ 342
Query: 325 PLFKDGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGL 504
PLFKDGKGCGSCYKIRCRKD SCSGRTETVIITDMNYYPV+ YHFDL+GTAFGRLAK L
Sbjct: 343 PLFKDGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAPYHFDLTGTAFGRLAKPRL 522
Query: 505 NDKLRHSGIIDIEFTRVPCEFPGLKIGFHV 594
ND+LRHSGIIDIEFTRVPCEFPGLKIGFHV
Sbjct: 523 NDRLRHSGIIDIEFTRVPCEFPGLKIGFHV 612
Score = 283 bits (612), Expect = 2e-075
Identities = 118/145 (81%), Positives = 121/145 (83%)
Frame = -2 / -3
Query: 593 TWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMI 414
TWNPIL PGNSHGT VNSMSMMPEWRSLSL ASLPNAVP+RSKW TG**FMSVMI
Sbjct: 611 TWNPILSPGNSHGTRVNSMSMMPEWRSLSLSRGFASLPNAVPVRSKW*GATG**FMSVMI 432
Query: 413 TVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAP 234
TVSV PEQD SFLH IL* EPHPLPSLNNGW PQE MD GYWLVCLKP APPLSSGPAP
Sbjct: 431 TVSVLPEQDWSFLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCLKPQAPPLSSGPAP 252
Query: 233 LGWPYQVARAFCQGPQYTAASLVLK 159
LGWPYQVA A QGPQY AS+ L+
Sbjct: 251 LGWPYQVALAGVQGPQYLVASVTLR 177
Score = 237 bits (513), Expect = 7e-062
Identities = 97/137 (70%), Positives = 106/137 (77%)
Frame = +3 / +3
Query: 183 VLGPLAEGPGHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLL 362
VLGPL G G LV WC+RLQAHQPVP+ VH LLR+PAIVQGRQGMRL+L
Sbjct: 201 VLGPLDPGQGDLVWPAQWRRPRRQRWCLRLQAHQPVPVRVHDLLRQPAIVQGRQGMRLML 380
Query: 363 QDSVQEGPVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHR 542
QD +QEGP+LLR DGDGDHHRHELLPG +PLRP RHGVRQA + QRQAPPL HHRHR
Sbjct: 381 QDQMQEGPILLRQDGDGDHHRHELLPGGALPLRPDRHGVRQARKAPAQRQAPPLRHHRHR 560
Query: 543 VHQGAVRVPWPQDRVPR 593
VH GAVR+P QDRVPR
Sbjct: 561 VHTGAVRIPGAQDRVPR 611
Score = 77.6 bits (163), Expect(2) = 5e-030
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = -1 / -2
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
P GAG VLPA +LVA AASLAVLEQWLV+AG HG E VLVGVLE
Sbjct: 420 PAGAGLVLPASDLVA*AASLAVLEQWLVAAGGHGRERVLVGVLE 289
Score = 74.4 bits (156), Expect(2) = 5e-030
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = -1 / -2
Query: 594 HVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRA 469
+VEPDLE RE ARHP ELDVDDA VAE VVE GL +PAERRA
Sbjct: 612 NVEPDLEPREFARHPCELDVDDAGVAEPVVEPGLCEPAERRA 487
Score = 69.3 bits (145), Expect(2) = 3e-024
Identities = 28/36 (77%), Positives = 28/36 (77%)
Frame = -3 / -1
Query: 376 CTESCSRSRIPCRP*TMAGFRRSPWT*RGTGWCA*S 269
C SCS SRIPCRP*TMAG RR WT GTGWCA*S
Sbjct: 394 CI*SCSMSRIPCRP*TMAGCRRRSWTRTGTGWCA*S 287
Score = 62.9 bits (131), Expect(2) = 3e-024
Identities = 27/35 (77%), Positives = 27/35 (77%)
Frame = -3 / -1
Query: 556 APW*TRCR*CPSGGACR*GRTWPACRTPCR*GRSG 452
AP *TRCR*C SGGACR* ACRTPCR GRSG
Sbjct: 574 APV*TRCR*CRSGGACR*AGALRACRTPCRSGRSG 470
>gb|BG310251.1|BG310251 HVSMEc0016K12f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016K12f, mRNA sequence
Length = 787
Score = 334 bits (723), Expect = 8e-091
Identities = 127/144 (88%), Positives = 132/144 (91%)
Frame = +1 / +2
Query: 157 NFNTSEAAVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFK 336
+ N ++A YWGPW ARATWYGQPNGAGPDDNGGACGFKHTNQYPF SM SCGNQPLFK
Sbjct: 161 DLNVTDATKYWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCGNQPLFK 340
Query: 337 DGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKL 516
DGKGCGSCYKIRCRKD SCSGRTETVIITDMNYYPV+ YHFDLSGTAFGRLAK GLND+L
Sbjct: 341 DGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAPYHFDLSGTAFGRLAKPGLNDRL 520
Query: 517 RHSGIIDIEFTRVPCEFPGLKIGF 588
RHSGIIDIEFTRVPCEF GLKIGF
Sbjct: 521 RHSGIIDIEFTRVPCEFLGLKIGF 592
Score = 276 bits (598), Expect = 1e-073
Identities = 117/144 (81%), Positives = 119/144 (82%)
Frame = -2 / -2
Query: 590 WNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMIT 411
WNPIL P NSHGT VNSMSMMPE RSLSL P ASLPNAVPLRSKW TG**FMSVMIT
Sbjct: 594 WNPILSPRNSHGTRVNSMSMMPECRSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMIT 415
Query: 410 VSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPL 231
VSV PEQD SFLH IL* EPHPLPSLNNGW PQE MD GYWLVCLKP APPLSSGPAPL
Sbjct: 414 VSVLPEQDWSFLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCLKPQAPPLSSGPAPL 235
Query: 230 GWPYQVARAFCQGPQYTAASLVLK 159
GWPYQVA A QGPQY AS+ L+
Sbjct: 234 GWPYQVALAGVQGPQYLVASVTLR 163
Score = 237 bits (512), Expect = 1e-061
Identities = 97/136 (71%), Positives = 106/136 (77%)
Frame = +3 / +1
Query: 183 VLGPLAEGPGHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLL 362
VLGPL G G LV WC+RLQAHQPVP+ VH LLR+PAIVQGRQGMRL+L
Sbjct: 187 VLGPLDPGQGDLVWPAQWRRPRRQRWCLRLQAHQPVPVRVHDLLRQPAIVQGRQGMRLML 366
Query: 363 QDSVQEGPVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHR 542
QD +QEGP+LLR DGDGDHHRHELLPG +PLRPQRHGVRQA + R QRQAP L HHRHR
Sbjct: 367 QDQMQEGPILLRQDGDGDHHRHELLPGGALPLRPQRHGVRQARKARAQRQAPALRHHRHR 546
Query: 543 VHQGAVRVPWPQDRVP 590
+H GAVRVP QDRVP
Sbjct: 547 IHTGAVRVPGAQDRVP 594
Score = 77.6 bits (163), Expect(2) = 8e-029
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = -1 / -1
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
P GAG VLPA +LVA AASLAVLEQWLV+AG HG E VLVGVLE
Sbjct: 406 PAGAGLVLPASDLVA*AASLAVLEQWLVAAGGHGRERVLVGVLE 275
Score = 70.3 bits (147), Expect(2) = 8e-029
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1 / -1
Query: 591 VEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
+EPDLE +ELARHP E DVDDA V E VVE GL +PAERRAA
Sbjct: 595 LEPDLEPQELARHPCEFDVDDAGVPEPVVEPGLCEPAERRAA 470
Score = 69.3 bits (145), Expect(2) = 3e-024
Identities = 28/36 (77%), Positives = 28/36 (77%)
Frame = -3 / -3
Query: 376 CTESCSRSRIPCRP*TMAGFRRSPWT*RGTGWCA*S 269
C SCS SRIPCRP*TMAG RR WT GTGWCA*S
Sbjct: 380 CI*SCSMSRIPCRP*TMAGCRRRSWTRTGTGWCA*S 273
Score = 62.9 bits (131), Expect(2) = 3e-024
Identities = 27/35 (77%), Positives = 27/35 (77%)
Frame = -3 / -3
Query: 556 APW*TRCR*CPSGGACR*GRTWPACRTPCR*GRSG 452
AP * RCR*C S GACR* R ACRTPCR*GRSG
Sbjct: 560 APV*IRCR*CRSAGACR*ARALRACRTPCR*GRSG 456
>gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016J13f, mRNA sequence
Length = 656
Score = 333 bits (722), Expect = 1e-090
Identities = 126/159 (79%), Positives = 141/159 (88%)
Frame = +1 / +3
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W+ ARATWYG P GAGP D+GGACGFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 180 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 359
Query: 376 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRV 555
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AK GL++KLRHSGIIDI+F RV
Sbjct: 360 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 539
Query: 556 PCEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVD 672
PCEFPGLK+ FHVE+ S+PVYFAVLVEYEDGDGD V VD
Sbjct: 540 PCEFPGLKVTFHVEQGSNPVYFAVLVEYEDGDGDXVXVD 656
Score = 232 bits (501), Expect = 3e-060
Identities = 102/143 (71%), Positives = 108/143 (75%)
Frame = -2 / -2
Query: 623 AK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLD 444
AK TG + STW LRPGNSHGTL+N MSMMPE RS SLRP LA PNAVPLRSKWYL
Sbjct: 607 AKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLA 428
Query: 443 TG**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPH 264
TG**FMSVM TVS PEQD S +HRI *QEPHPLPSL G P + M+ KGYWLV L PH
Sbjct: 427 TG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPH 248
Query: 263 APPLSSGPAPLGWPYQVARAFCQ 195
APP S GPAP+G PYQVA A Q
Sbjct: 247 APPSSMGPAPVGAPYQVALASSQ 179
Score = 194 bits (419), Expect = 7e-049
Identities = 80/133 (60%), Positives = 94/133 (70%)
Frame = +3 / +2
Query: 210 GHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPV 389
GHLV WCVR+Q HQPVPL +H ++R+ A +QG QGMRLLL D+V + PV
Sbjct: 194 GHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRPV 373
Query: 390 LLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVP 569
LLR GDG HHRHELLPG QVPLRP+ H VR+ GQ RPQR+AP L HHRH V + AVRVP
Sbjct: 374 LLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESAVRVP 553
Query: 570 WPQDRVPRGGVLE 608
W Q +PRG +E
Sbjct: 554 WSQGDLPRGAGVE 592
Score = 72.1 bits (151), Expect(2) = 4e-026
Identities = 35/51 (68%), Positives = 36/51 (70%)
Frame = -1 / -1
Query: 621 EVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRA 469
EV R LLHVE LE RELARH ELDVDDA V EL+ EAGLG AER A
Sbjct: 605 EVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 453
Score = 66.6 bits (139), Expect(2) = 4e-026
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1 / -1
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V+ AP LVAGAASLA+LE LV+A HG EGVLVGVLE
Sbjct: 380 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 255
>gb|BE060246.3|BE060246 HVSMEg0011L08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011L08f, mRNA sequence
Length = 544
Score = 206 bits (445), Expect(2) = 5e-090
Identities = 83/92 (90%), Positives = 87/92 (94%)
Frame = +1 / +2
Query: 424 DMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEY 603
DMNYYPV+ YHFDLSGTAFGRLAK GLND+LRHSGIIDIEFTRVPCEFPGLKIGFHVEEY
Sbjct: 2 DMNYYPVAPYHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPCEFPGLKIGFHVEEY 181
Query: 604 SSPVYFAVLVEYEDGDGDVVQVDLMESKTARG 699
S+PVYFAVLVEYEDGDGDVVQVDLMES+ G
Sbjct: 182 SNPVYFAVLVEYEDGDGDVVQVDLMESRGPGG 277
Score = 145 bits (312), Expect(2) = 5e-090
Identities = 56/68 (82%), Positives = 61/68 (89%)
Frame = +1 / +2
Query: 691 ARGPPTGRWAPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVARNVIPANWRPNTFY 870
+RGP G+W MRESWGSVWR+D+NHR+Q PFSIRIRNESGKTLVA VIPANWRPNTFY
Sbjct: 260 SRGPGGGKWTRMRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPNTFY 439
Query: 871 RSFVQYS* 894
RSFVQYS*
Sbjct: 440 RSFVQYS* 463
Score = 138 bits (296), Expect(2) = 2e-058
Identities = 63/92 (68%), Positives = 64/92 (69%)
Frame = -2 / -2
Query: 698 PRAVLDSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEW 519
P DS+R TAK*TG EYSSTWNPIL PGNSHGT VNSMSMMPEW
Sbjct: 276 PPGPRDSMRSTCTTSPSPSSYSTSTAK*TGFEYSSTWNPILSPGNSHGTRVNSMSMMPEW 97
Query: 518 RSLSLRPDLASLPNAVPLRSKWYLDTG**FMS 423
RSLSL P ASLPNAVPLRSKW TG**FMS
Sbjct: 96 RSLSLSPGFASLPNAVPLRSKW*GATG**FMS 1
Score = 125 bits (268), Expect(2) = 3e-041
Identities = 51/62 (82%), Positives = 53/62 (85%)
Frame = +3 / +1
Query: 423 RHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVPWPQDRVPRGGV 602
RHELLPG +PLRPQRHGVRQA + R QRQAPPL HHRHRVH GAVRVP QDRVPRGGV
Sbjct: 1 RHELLPGGALPLRPQRHGVRQARKARAQRQAPPLRHHRHRVHTGAVRVPGAQDRVPRGGV 180
Query: 603 LE 608
LE
Sbjct: 181 LE 186
Score = 108 bits (230), Expect(2) = 2e-058
Identities = 50/66 (75%), Positives = 50/66 (75%)
Frame = -2 / -2
Query: 890 LYWTKER*KVLGLQLAGMTFLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGAQR 711
LY TKER*KVLGLQLAGMT LATSVLPDSLRMRME G RWL S RQTEP DS I
Sbjct: 459 LYCTKER*KVLGLQLAGMTLLATSVLPDSLRMRMENGAWRRWLESRRQTEPHDSLILVHF 280
Query: 710 PVGGPR 693
P GPR
Sbjct: 279 PPPGPR 262
Score = 100 bits (214), Expect(2) = 2e-035
Identities = 45/53 (84%), Positives = 46/53 (86%)
Frame = -1 / -1
Query: 624 REVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
REVDG RVLLHVEPDLE RELARHP ELDVDDA VAE VVE GL +PAERRAA
Sbjct: 202 REVDGVRVLLHVEPDLEPRELARHPCELDVDDAGVAEPVVEPGLCEPAERRAA 44
Score = 71.6 bits (150), Expect(2) = 2e-035
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -3 / -3
Query: 892 SCTGRRSGRRCWASSWPG*RSWRRASCRT 806
SCT RRSGRRCWASSWPG* WRRASCRT
Sbjct: 461 SCTARRSGRRCWASSWPG*PCWRRASCRT 375
Score = 68.4 bits (143), Expect(2) = 6e-024
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = -3 / -3
Query: 556 APW*TRCR*CPSGGACR*GRTWPACRTPCR*GRSG 452
AP *TRCR*C SGGACR* R ACRTPCR*GRSG
Sbjct: 134 APV*TRCR*CRSGGACR*ARALRACRTPCR*GRSG 30
Score = 66.6 bits (139), Expect(2) = 3e-041
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +3 / +1
Query: 804 RVRQDARRQERHPGQLEAQHLLPLLRPVQLAS 899
RVRQDARRQ+ HPGQLEAQHLLPLLR VQL S
Sbjct: 373 RVRQDARRQQGHPGQLEAQHLLPLLRAVQLKS 468
Score = 65.7 bits (137), Expect(2) = 6e-024
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -1 / -1
Query: 843 RDDVPGDERLAGLVADADGEGRLHAVVGVHAPD 745
RDD+ GDERLAGLVADADGE RL AVVGV APD
Sbjct: 412 RDDLVGDERLAGLVADADGEWRLEAVVGVEAPD 314
>gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010F11f, mRNA sequence
Length = 630
Score = 331 bits (717), Expect = 5e-090
Identities = 126/163 (77%), Positives = 144/163 (88%)
Frame = +1 / +1
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W+ ARATWYG GAGP D+GGACGFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 142 WEDARATWYGARTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 321
Query: 376 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRV 555
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AK GL++KLRHSGIIDI+F RV
Sbjct: 322 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 501
Query: 556 PCEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMES 684
PCEFPGLK+ FHVE+ S+PVYF VLVEY DGDG++VQVDLME+
Sbjct: 502 PCEFPGLKVTFHVEQGSNPVYFPVLVEY*DGDGNLVQVDLMEA 630
Score = 226 bits (489), Expect = 1e-058
Identities = 100/142 (70%), Positives = 106/142 (74%)
Frame = -2 / -2
Query: 620 K*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDT 441
K TG + STW LRPGNSHGTL+N MSMMPE RS SLRP LA PNAVPLRSKWYL T
Sbjct: 566 KYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLAT 387
Query: 440 G**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHA 261
G**FMSVM TVS PEQD S +HRI *QEPHPLPSL G P + M+ KGYWLV L PHA
Sbjct: 386 G**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHA 207
Query: 260 PPLSSGPAPLGWPYQVARAFCQ 195
PP S GPAP+ PYQVA A Q
Sbjct: 206 PPSSMGPAPVRAPYQVALASSQ 141
Score = 194 bits (419), Expect = 7e-049
Identities = 80/133 (60%), Positives = 94/133 (70%)
Frame = +3 / +3
Query: 210 GHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPV 389
GHLV WCVR+Q HQPVPL +H ++R+ A +QG QGMRLLL D+V + PV
Sbjct: 156 GHLVRRADGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRPV 335
Query: 390 LLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVP 569
LLR GDG HHRHELLPG QVPLRP+ H VR+ GQ RPQR+AP L HHRH V + AVRVP
Sbjct: 336 LLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESAVRVP 515
Query: 570 WPQDRVPRGGVLE 608
W Q +PRG +E
Sbjct: 516 WSQGDLPRGAGVE 554
Score = 72.1 bits (151), Expect(2) = 4e-026
Identities = 35/51 (68%), Positives = 36/51 (70%)
Frame = -1 / -1
Query: 621 EVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRA 469
EV R LLHVE LE RELARH ELDVDDA V EL+ EAGLG AER A
Sbjct: 567 EVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 415
Score = 66.6 bits (139), Expect(2) = 4e-026
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1 / -1
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V+ AP LVAGAASLA+LE LV+A HG EGVLVGVLE
Sbjct: 342 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 217
>gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024K16f, mRNA sequence
Length = 677
Score = 329 bits (713), Expect = 2e-089
Identities = 125/161 (77%), Positives = 140/161 (86%)
Frame = +1 / +2
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W+ ARATWYG P GAGP D+GGACGFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 194 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 373
Query: 376 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRV 555
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AK GL++KLRHSGIIDI+F RV
Sbjct: 374 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 553
Query: 556 PCEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLM 678
PCEFPGLK+ HVE+ S+PVYF VLVEY DGD D VQVDLM
Sbjct: 554 PCEFPGLKVTXHVEQGSNPVYFXVLVEYXDGDXDXVQVDLM 676
Score = 224 bits (484), Expect = 7e-058
Identities = 100/142 (70%), Positives = 106/142 (74%)
Frame = -2 / -3
Query: 620 K*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDT 441
K TG + ST LRPGNSHGTL+N MSMMPE RS SLRP LA PNAVPLRSKWYL T
Sbjct: 618 KYTGFDPCSTXKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLAT 439
Query: 440 G**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHA 261
G**FMSVM TVS PEQD S +HRI *QEPHPLPSL G P + M+ KGYWLV L PHA
Sbjct: 438 G**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHA 259
Query: 260 PPLSSGPAPLGWPYQVARAFCQ 195
PP S GPAP+G PYQVA A Q
Sbjct: 258 PPSSMGPAPVGAPYQVALASSQ 193
Score = 190 bits (410), Expect = 1e-047
Identities = 79/133 (59%), Positives = 93/133 (69%)
Frame = +3 / +1
Query: 210 GHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPV 389
GHLV WCVR+Q HQPVPL +H ++R+ A +QG QGMRLLL D+V + PV
Sbjct: 208 GHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRPV 387
Query: 390 LLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVP 569
LLR GDG HHRHELLPG QVPLRP+ H VR+ GQ RPQR+AP L HHRH V + AVRVP
Sbjct: 388 LLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESAVRVP 567
Query: 570 WPQDRVPRGGVLE 608
W Q + RG +E
Sbjct: 568 WSQGDLXRGAGVE 606
Score = 69.3 bits (145), Expect(2) = 3e-025
Identities = 34/51 (66%), Positives = 35/51 (68%)
Frame = -1 / -2
Query: 621 EVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRA 469
EV R LLHV LE RELARH ELDVDDA V EL+ EAGLG AER A
Sbjct: 619 EVHRVRPLLHVXGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 467
Score = 66.6 bits (139), Expect(2) = 3e-025
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1 / -2
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V+ AP LVAGAASLA+LE LV+A HG EGVLVGVLE
Sbjct: 394 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 269
>gb|AV917139.1|AV917139 AV917139 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20o17 5', mRNA sequence
Length = 590
Score = 204 bits (440), Expect(2) = 8e-088
Identities = 82/106 (77%), Positives = 93/106 (87%)
Frame = +1 / +1
Query: 379 KDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRVP 558
K +CSGR ETV+ITDMNYYPV+ YHFDLSGTAFG+LAK G ND+LRH+GIIDI+FTRV
Sbjct: 7 KHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVA 186
Query: 559 CEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMESKTAR 696
CEFPGLK+GFHVEE S+ VY A+LVEYE+GDGDVVQVDLMES R
Sbjct: 187 CEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLMESGRGR 324
Score = 140 bits (301), Expect(2) = 8e-088
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = +1 / +1
Query: 709 GRWAPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVARNVIPANWRPNTFYRSFVQY 888
GRW MRESWGS+WR+D+NHR+Q PFSIRIRNESGKTLVARNVIP NWRPNTFYRS VQY
Sbjct: 334 GRWTRMRESWGSIWRLDSNHRLQAPFSIRIRNESGKTLVARNVIPKNWRPNTFYRSIVQY 513
Query: 889 S*L 897
S*+
Sbjct: 514 S*I 522
Score = 125 bits (267), Expect(2) = 1e-052
Identities = 60/97 (61%), Positives = 63/97 (64%)
Frame = -2 / -1
Query: 683 DSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSL 504
DS+R A T L+ SSTWNP PGNSH TLVN MSMMP RS SL
Sbjct: 311 DSMRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSL 132
Query: 503 RPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPE 393
RP LASLP AVPLRSKW TG**FMSV+ITVS RPE
Sbjct: 131 RPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPE 21
Score = 118 bits (253), Expect(2) = 2e-037
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = +3 / +3
Query: 378 EGPVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGA 557
E +LRA GDGD H HELLPG +PLRPQRH +RQA Q RPQR+AP HHRH VHQG
Sbjct: 6 EAQGVLRAAGDGDDHGHELLPGGALPLRPQRHRLRQARQARPQRRAPTRRHHRHPVHQGG 185
Query: 558 VRVPWPQDRVPRGG 599
VRVP + VPRGG
Sbjct: 186 VRVPGAEGGVPRGG 227
Score = 102 bits (217), Expect(2) = 1e-052
Identities = 45/62 (72%), Positives = 46/62 (74%)
Frame = -2 / -1
Query: 893 *LYWTKER*KVLGLQLAGMTFLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGAQ 714
*LYWT ER*KVLGLQ GMT ATSVLPDSLRMRME G RWL S RQ +P DSRI
Sbjct: 518 *LYWTMER*KVLGLQFLGMTLRATSVLPDSLRMRMENGAWRRWLESRRQMDPHDSRIRVH 339
Query: 713 RP 708
RP
Sbjct: 338 RP 333
Score = 79.9 bits (168), Expect(2) = 5e-028
Identities = 37/53 (69%), Positives = 40/53 (75%)
Frame = -1 / -3
Query: 624 REVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
R V LLHVEP L+ RELARHPGELDVDDA V+ELVV AGLG+ AE AA
Sbjct: 252 RHVHRVGPLLHVEPHLQPRELARHPGELDVDDAGVSELVVAAGLGELAEGGAA 94
Score = 65.2 bits (136), Expect(2) = 5e-028
Identities = 31/50 (62%), Positives = 32/50 (64%)
Frame = -1 / -3
Query: 894 LAVLDXXXXXXXXXXXGRDDVPGDERLAGLVADADGEGRLHAVVGVHAPD 745
LAVLD DDV GDERLAGLVADADGE RL +VGV APD
Sbjct: 519 LAVLDDGAVEGVGPPVLGDDVAGDERLAGLVADADGEWRLETMVGVEAPD 370
Score = 61.1 bits (127), Expect(2) = 2e-037
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3 / +3
Query: 804 RVRQDARRQERHPGQLEAQHLLPLLRPVQL 893
RVRQDARR +RHP +LEAQHLLPL RPVQL
Sbjct: 429 RVRQDARRPQRHPQELEAQHLLPLHRPVQL 518
>gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002I16f, mRNA sequence
Length = 851
Score = 187 bits (403), Expect(4) = 4e-087
Identities = 73/116 (62%), Positives = 92/116 (79%)
Frame = +1 / +2
Query: 385 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRVPCE 564
P+CSG ETVIITDMNYYPVS++HFDLSGTAFG +AK G N++LRH+GIID++F RVPC+
Sbjct: 233 PACSGVPETVIITDMNYYPVSRFHFDLSGTAFGAMAKDGRNEELRHAGIIDMQFRRVPCQ 412
Query: 565 FPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMESKTARGPPTGRWAPMRE 732
+PGL + FHV+ S+P Y A+LVEYE+GDGDV QVD+M+S+ G AP E
Sbjct: 413 YPGLTVTFHVQHGSNPYYLAILVEYENGDGDVDQVDMMQSRPDAAAGEGGMAPTGE 580
Score = 135 bits (289), Expect(4) = 4e-087
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +1 / +2
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W ARATWYG PNGAGPDDNGGACGFK+ N PF +M SCGN+PLFKDGKGCGSCY+IRC
Sbjct: 38 WLDARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRC 217
Score = 116 bits (249), Expect(3) = 5e-055
Identities = 60/116 (51%), Positives = 65/116 (56%)
Frame = -2 / -3
Query: 731 SRIGAQRPVGGPRAVLDSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGT 552
S +GA P + D I A+* GLE TWN + PG HGT
Sbjct: 579 SPVGAIPPSPAAASGRDCIMSTWSTSPSPFSYSTRMAR**GLEPCCTWNVTVSPGYWHGT 400
Query: 551 LVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 384
L+N MSMMP RS SLRP LA P AVPLRSKW DTG**FMSVMITVS PE G
Sbjct: 399 LLNCMSMMPACRSSSLRPSLAMAPKAVPLRSKWKRDTG**FMSVMITVSGTPEHAG 232
Score = 110 bits (235), Expect(3) = 2e-058
Identities = 41/61 (67%), Positives = 45/61 (73%)
Frame = +1 / +2
Query: 703 PTGRWAPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVARNVIPANWRPNTFYRSFV 882
PTG W PM ESWGS+WRMDT MQ PFS+RI NESGKTLVA V P +W PN Y SF+
Sbjct: 569 PTGEWVPMTESWGSIWRMDTRRPMQGPFSLRITNESGKTLVADQVNPGDWEPNEIYSSFI 748
Query: 883 Q 885
Q
Sbjct: 749 Q 751
Score = 110 bits (234), Expect(3) = 2e-058
Identities = 45/70 (64%), Positives = 51/70 (72%)
Frame = +3 / +1
Query: 384 PVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVR 563
P +LR GDGDHH HELLPGV +PLRPQRH +R+ GQ RPQR+AP HHRH V +GAV
Sbjct: 232 PGVLRRAGDGDHHGHELLPGVPLPLRPQRHRLRRHGQGRPQRRAPARRHHRHAVQKGAVP 411
Query: 564 VPWPQDRVPR 593
VP VPR
Sbjct: 412 VPGADGDVPR 441
Score = 89.5 bits (189), Expect(3) = 5e-055
Identities = 41/60 (68%), Positives = 42/60 (70%)
Frame = -2 / -3
Query: 374 HRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQVARAFCQ 195
HRI *QEP PLPSL +G PQE M KG L L P APPLSSGPAPLG PYQVA A Q
Sbjct: 216 HRIW*QEPQPLPSLKSGSLPQEVMAEKGGRLTFLNPQAPPLSSGPAPLGAPYQVALASSQ 37
Score = 80.8 bits (170), Expect(3) = 4e-036
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = -2 / -3
Query: 884 WTKER*KVLGLQLAGMTFLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGAQRPV 705
W KE * LG Q G+T+ ATSVLPDSL MR EKG CM VS+RQ EPQDS +G PV
Sbjct: 750 WMKEL*ISLGSQSPGLTWSATSVLPDSLVMRSEKGPCMGRRVSIRQMEPQDSVMGTHSPV 571
Query: 704 G 702
G
Sbjct: 570 G 568
Score = 57.0 bits (118), Expect(3) = 4e-036
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = -1 / -2
Query: 621 EVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
+V G +LHVE + R LARHP EL VDDA V EL V A LG AE AA
Sbjct: 469 QVVGVGTVLHVERHRQPRVLARHPSELHVDDAGVPELFVAAVLGHGAEGGAA 314
Score = 52.8 bits (109), Expect(3) = 4e-036
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = -1 / -2
Query: 375 APNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
AP LVAGAA+LAVLE+ LV+AG HG EG V VLE
Sbjct: 217 APYLVAGAAALAVLEERLVAAGGHGGEGWQVDVLE 113
Score = 50.6 bits (104), Expect(3) = 2e-058
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +3 / +1
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEG 383
+R+Q QP L H LLR+ A +QGRQG+RLLL D+V+ G
Sbjct: 106 LRVQERQPATLLRHDLLRQRAALQGRQGLRLLLPDTVRVG 225
Score = 47.8 bits (98), Expect(3) = 5e-055
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -1 / -2
Query: 837 DVPGDERLAGLVADADGEGRLHAVVGVHAPD 745
D+ GDERLAGLV DA EG LH VH PD
Sbjct: 703 DLVGDERLAGLVGDAQREGALHGAPCVHPPD 611
Score = 32.2 bits (64), Expect(4) = 4e-087
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3 / +1
Query: 804 RVRQDARRQERHPGQLEAQHLLPLLRPVQL 893
RVRQDARR+ +L AQ L LL P +L
Sbjct: 670 RVRQDARRRPGQSRRLGAQRNLQLLHPSRL 759
Score = 25.4 bits (49), Expect(4) = 4e-087
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / +3
Query: 731 SPGAPSGAW 757
SPGAPSG W
Sbjct: 597 SPGAPSGGW 623
>gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL105f8 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 702
Score = 182 bits (391), Expect(3) = 6e-087
Identities = 70/101 (69%), Positives = 88/101 (87%)
Frame = +1 / +3
Query: 385 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRVPCE 564
P+CSG +TVIITDMNY PVS+YHFDLSGTAFG +AK G ND+LRH+GII+++F RVPC+
Sbjct: 315 PACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQ 494
Query: 565 FPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMESK 687
+PGL + FHVEE S+P Y A+LVEYE+GDGDV Q+D+MES+
Sbjct: 495 YPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESR 617
Score = 134 bits (288), Expect(3) = 6e-087
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +1 / +3
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W A+ATWYG+P GAGPDDNGGACGFK+ N PF SM SCGNQPLFKDGKGCGSCY+IRC
Sbjct: 120 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 299
Score = 110 bits (234), Expect(2) = 2e-046
Identities = 53/100 (53%), Positives = 58/100 (58%)
Frame = -2 / -3
Query: 683 DSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSL 504
DSI A * G + SSTWN + PG HGTL+N M +MP WRS SL
Sbjct: 613 DSIMSSCFTSPSPFSYSTRIAM*NGFDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSL 434
Query: 503 RPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 384
RP LA P AVPLRSKW +TG *FMSVMITV PE G
Sbjct: 433 RPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHAG 314
Score = 108 bits (230), Expect(2) = 2e-031
Identities = 44/75 (58%), Positives = 53/75 (70%)
Frame = +3 / +2
Query: 384 PVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVR 563
P +LR DGDHHRHEL PG+ +PLRPQ H +R GQVR QR+APP H++H V +GAV
Sbjct: 314 PCVLRCAQDGDHHRHELRPGLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAVP 493
Query: 564 VPWPQDRVPRGGVLE 608
VP VPRGG +E
Sbjct: 494 VPGVDGDVPRGGGVE 538
Score = 96.8 bits (205), Expect(2) = 2e-046
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = -2 / -3
Query: 380 FLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQVARAF 201
F H I *QEP PLPSL +GW PQE M+ KG L L PHAPPLSSGPAP+G PY VA A
Sbjct: 304 FKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPPLSSGPAPVGLPYHVALAS 125
Query: 200 CQ 195
Q
Sbjct: 124 SQ 119
Score = 48.7 bits (100), Expect(2) = 2e-031
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3 / +2
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSV 374
VR+Q Q L +H LLR+P +QGRQG+RLLL D V
Sbjct: 188 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKV 298
Score = 44.6 bits (91), Expect(3) = 6e-087
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1 / +3
Query: 703 PTGRWAPMRESWGSVWRM 756
PTG+W PM+ESW S+WRM
Sbjct: 648 PTGQWVPMKESWXSIWRM 701
>gb|BF256653.2|BF256653 HVSMEf0010J19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010J19f, mRNA sequence
Length = 841
Score = 318 bits (688), Expect = 5e-086
Identities = 126/175 (72%), Positives = 144/175 (82%)
Frame = +1 / +2
Query: 178 AVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGS 357
AV G ARATWYG PNGAGP DNGGACGFK+ N+YPFM+M SCGNQPLFKDGKGCG+
Sbjct: 266 AVSIGQSGVARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGA 445
Query: 358 CYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIID 537
CYKI+C K +CSGR ETV+ITDMNYYPV+ YHFDLSGTAFG+LAK G ND+LRH+GIID
Sbjct: 446 CYKIKCTKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIID 625
Query: 538 IEFTRVPCEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMESKTARGP 702
I+FTRV CEFPGLK+GFHVEE S+ VY A+ VE E+ DGD+VQVD + A P
Sbjct: 626 IQFTRVACEFPGLKVGFHVEEGSNAVYMAIPVEVENRDGDLVQVDPHGVRPATAP 790
Score = 220 bits (474), Expect = 2e-056
Identities = 101/149 (67%), Positives = 106/149 (71%)
Frame = -2 / -2
Query: 614 TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG* 435
T L+ SSTWNP PGNSH TLVN MSMMP RS SLRP LASLP AVPLRSKW TG*
Sbjct: 702 TALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG* 523
Query: 434 *FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPP 255
*FMSV+ITVS RPE F+H IL* P PLPSLN+GW PQE M M GY L P APP
Sbjct: 522 *FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPP 343
Query: 254 LSSGPAPLGWPYQVARAFCQGPQYTAASL 168
LS GPAPLG PYQVARA P TA +L
Sbjct: 342 LS*GPAPLGAPYQVARATPDCPMDTAVAL 256
Score = 176 bits (378), Expect = 3e-043
Identities = 72/112 (64%), Positives = 84/112 (75%)
Frame = +3 / +1
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPVLLRADGDGDHHRHELLPG 443
+R+Q +PVP+H H LLR+PA VQGRQG+R +LQD V E +LRA GDGD H HELLPG
Sbjct: 352 LRVQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQGVLRAAGDGDDHGHELLPG 531
Query: 444 VQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVPWPQDRVPRGG 599
+PLRPQRH +RQA Q RPQR+AP HHRH VHQG VRVP + VPRGG
Sbjct: 532 GALPLRPQRHRLRQARQARPQRRAPTRRHHRHPVHQGGVRVPGAEGGVPRGG 687
Score = 79.9 bits (168), Expect(2) = 5e-027
Identities = 37/53 (69%), Positives = 40/53 (75%)
Frame = -1 / -1
Query: 624 REVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
R V LLHVEP L+ RELARHPGELDVDDA V+ELVV AGLG+ AE AA
Sbjct: 712 RHVHRVGPLLHVEPHLQPRELARHPGELDVDDAGVSELVVAAGLGELAEGGAA 554
Score = 62.0 bits (129), Expect(2) = 5e-027
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -1 / -1
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
PPGA VL A +LVA AA+LAVLEQ LV+AG HGHE V V VLE
Sbjct: 490 PPGARLVLRALDLVACAAALAVLEQRLVAAGGHGHERVPVHVLE 359
>gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019F12f, mRNA sequence
Length = 669
Score = 275 bits (595), Expect(2) = 6e-086
Identities = 102/128 (79%), Positives = 114/128 (89%)
Frame = +1 / +2
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W+ ARATWYG P GAGP D+GGACGFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 194 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 373
Query: 376 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRV 555
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AK GL++KLRHSGIIDI+F RV
Sbjct: 374 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 553
Query: 556 PCEFPGLK 579
PCEFPGLK
Sbjct: 554 PCEFPGLK 577
Score = 218 bits (470), Expect = 6e-056
Identities = 95/128 (74%), Positives = 100/128 (78%)
Frame = -2 / -1
Query: 578 LRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVR 399
LRPGNSHGTL+N MSMMPE RS SLRP LA PNAVPLRSKWYL TG**FMSVM TVS
Sbjct: 576 LRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGL 397
Query: 398 PEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPY 219
PEQD S +HRI *QEPHPLPSL G P + M+ KGYWLV L PHAPP S GPAP+G PY
Sbjct: 396 PEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPY 217
Query: 218 QVARAFCQ 195
QVA A Q
Sbjct: 216 QVALASSQ 193
Score = 186 bits (400), Expect = 3e-046
Identities = 76/123 (61%), Positives = 88/123 (71%)
Frame = +3 / +1
Query: 210 GHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPV 389
GHLV WCVR+Q HQPVPL +H ++R+ A +QG QGMRLLL D+V + PV
Sbjct: 208 GHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRPV 387
Query: 390 LLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVP 569
LLR GDG HHRHELLPG QVPLRP+ H VR+ GQ RPQR+AP L HHRH V + AVRVP
Sbjct: 388 LLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESAVRVP 567
Query: 570 WPQ 578
W Q
Sbjct: 568 WSQ 576
Score = 66.6 bits (139), Expect(2) = 7e-022
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1 / -3
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V+ AP LVAGAASLA+LE LV+A HG EGVLVGVLE
Sbjct: 394 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 269
Score = 63.4 bits (132), Expect(2) = 6e-086
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1 / +1
Query: 568 PGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVD 672
P ++ FHVE+ S+PVYFAVLVEY+DGDG VVQVD
Sbjct: 565 PWSQVTFHVEQGSNPVYFAVLVEYQDGDGHVVQVD 669
Score = 57.9 bits (120), Expect(2) = 7e-022
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = -1 / -3
Query: 579 LEARELARHPGELDVDDARVAELVVEAGLGQPAERRA 469
LE RELARH ELDVDDA V EL+ EAGLG AER A
Sbjct: 577 LETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 467
>gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09C23
5-PRIME, mRNA sequence
Length = 653
Score = 317 bits (686), Expect = 1e-085
Identities = 119/150 (79%), Positives = 134/150 (89%)
Frame = +1 / +1
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W+ ARATWYG P GAGP D+GGACGFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 202 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 381
Query: 376 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRV 555
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AK GL++KLRHSGIIDI+F RV
Sbjct: 382 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 561
Query: 556 PCEFPGLKIGFHVEEYSSPVYFAVLVEYED 645
PCEFPGLK+ FHVE+ S+PVYFAVLVEYED
Sbjct: 562 PCEFPGLKVTFHVEQGSNPVYFAVLVEYED 651
Score = 232 bits (501), Expect = 3e-060
Identities = 102/143 (71%), Positives = 108/143 (75%)
Frame = -2 / -1
Query: 623 AK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLD 444
AK TG + STW LRPGNSHGTL+N MSMMPE RS SLRP LA PNAVPLRSKWYL
Sbjct: 629 AKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLA 450
Query: 443 TG**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPH 264
TG**FMSVM TVS PEQD S +HRI *QEPHPLPSL G P + M+ KGYWLV L PH
Sbjct: 449 TG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPH 270
Query: 263 APPLSSGPAPLGWPYQVARAFCQ 195
APP S GPAP+G PYQVA A Q
Sbjct: 269 APPSSMGPAPVGAPYQVALASSQ 201
Score = 194 bits (419), Expect = 7e-049
Identities = 80/133 (60%), Positives = 94/133 (70%)
Frame = +3 / +3
Query: 210 GHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPV 389
GHLV WCVR+Q HQPVPL +H ++R+ A +QG QGMRLLL D+V + PV
Sbjct: 216 GHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRPV 395
Query: 390 LLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVP 569
LLR GDG HHRHELLPG QVPLRP+ H VR+ GQ RPQR+AP L HHRH V + AVRVP
Sbjct: 396 LLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESAVRVP 575
Query: 570 WPQDRVPRGGVLE 608
W Q +PRG +E
Sbjct: 576 WSQGDLPRGAGVE 614
Score = 72.1 bits (151), Expect(2) = 4e-026
Identities = 35/51 (68%), Positives = 36/51 (70%)
Frame = -1 / -3
Query: 621 EVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRA 469
EV R LLHVE LE RELARH ELDVDDA V EL+ EAGLG AER A
Sbjct: 627 EVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 475
Score = 66.6 bits (139), Expect(2) = 4e-026
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1 / -3
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V+ AP LVAGAASLA+LE LV+A HG EGVLVGVLE
Sbjct: 402 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 277
>gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL87h3 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 701
Score = 178 bits (384), Expect(3) = 1e-085
Identities = 69/101 (68%), Positives = 87/101 (86%)
Frame = +1 / +3
Query: 385 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRVPCE 564
P+CSG +TVIITDMNY PVS+YHFDLSGTAFG +AK G ND+LRH+GII+++F RVPC+
Sbjct: 321 PACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQ 500
Query: 565 FPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMESK 687
+P L + FHVEE S+P Y A+LVEYE+GDGDV Q+D+MES+
Sbjct: 501 YPXLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESR 623
Score = 134 bits (288), Expect(3) = 1e-085
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +1 / +3
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W A+ATWYG+P GAGPDDNGGACGFK+ N PF SM SCGNQPLFKDGKGCGSCY+IRC
Sbjct: 126 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 305
Score = 108 bits (230), Expect(2) = 2e-031
Identities = 44/75 (58%), Positives = 53/75 (70%)
Frame = +3 / +2
Query: 384 PVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVR 563
P +LR DGDHHRHEL PG+ +PLRPQ H +R GQVR QR+APP H++H V +GAV
Sbjct: 320 PCVLRCAQDGDHHRHELRPGLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAVP 499
Query: 564 VPWPQDRVPRGGVLE 608
VP VPRGG +E
Sbjct: 500 VPGVDGDVPRGGGVE 544
Score = 105 bits (225), Expect(2) = 3e-045
Identities = 52/100 (52%), Positives = 57/100 (57%)
Frame = -2 / -2
Query: 683 DSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSL 504
DSI A * G + SSTWN + G HGTL+N M +MP WRS SL
Sbjct: 619 DSIMSSCFTSPSPFSYSTRIAM*NGFDPSSTWNVTVNXGYWHGTLLNCMLIMPAWRSSSL 440
Query: 503 RPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 384
RP LA P AVPLRSKW +TG *FMSVMITV PE G
Sbjct: 439 RPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHAG 320
Score = 96.8 bits (205), Expect(2) = 3e-045
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = -2 / -2
Query: 380 FLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQVARAF 201
F H I *QEP PLPSL +GW PQE M+ KG L L PHAPPLSSGPAP+G PY VA A
Sbjct: 310 FKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPPLSSGPAPVGLPYHVALAS 131
Query: 200 CQ 195
Q
Sbjct: 130 SQ 125
Score = 48.7 bits (100), Expect(2) = 2e-031
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3 / +2
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSV 374
VR+Q Q L +H LLR+P +QGRQG+RLLL D V
Sbjct: 194 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKV 304
Score = 43.2 bits (88), Expect(3) = 1e-085
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1 / +3
Query: 703 PTGRWAPMRESWGSVW 750
PTG+W PM+ESWGS+W
Sbjct: 654 PTGQWVPMKESWGSIW 701
>gb|CB882163.1|CB882163 HL01B01w HL Hordeum vulgare subsp. vulgare cDNA clone HL01B01
3-PRIME, mRNA sequence
Length = 574
Score = 316 bits (684), Expect = 2e-085
Identities = 119/135 (88%), Positives = 124/135 (91%)
Frame = +1 / +1
Query: 157 NFNTSEAAVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFK 336
+ N ++A YWGPW ARATWYGQPNGAGPDDNGGACGFKHTNQYPF SM SCGNQPLFK
Sbjct: 169 DLNVTDATKYWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCGNQPLFK 348
Query: 337 DGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKL 516
DGKGCGSCYKIRCRKD SCSGRTETVIITDMNYYPV+ YHFDLSGTAFGRLAK GLND+L
Sbjct: 349 DGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAPYHFDLSGTAFGRLAKPGLNDRL 528
Query: 517 RHSGIIDIEFTRVPC 561
RHSGIIDIEFTRVPC
Sbjct: 529 RHSGIIDIEFTRVPC 573
Score = 261 bits (565), Expect = 5e-069
Identities = 110/134 (82%), Positives = 112/134 (83%)
Frame = -2 / -3
Query: 560 HGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGS 381
HGT VNSMSMMPEWRSLSL P ASLPNAVPLRSKW TG**FMSVMITVSV PEQD S
Sbjct: 572 HGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMITVSVLPEQDWS 393
Query: 380 FLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQVARAF 201
FLH IL* EPHPLPSLNNGW PQE MD GYWLVCLKP APPLSSGPAPLGWPYQVA A
Sbjct: 392 FLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCLKPQAPPLSSGPAPLGWPYQVALAG 213
Query: 200 CQGPQYTAASLVLK 159
QGPQY AS+ L+
Sbjct: 212 VQGPQYLVASVTLR 171
Score = 217 bits (468), Expect = 1e-055
Identities = 89/126 (70%), Positives = 97/126 (76%)
Frame = +3 / +3
Query: 183 VLGPLAEGPGHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLL 362
VLG L G G LV WC+RLQAHQPVP+ VH LLR+PAIVQGRQGMRL+L
Sbjct: 195 VLGTLDPGQGDLVRPAQWRRPRRQRWCLRLQAHQPVPVRVHDLLRQPAIVQGRQGMRLML 374
Query: 363 QDSVQEGPVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHR 542
QD +QEGP+LLR DGDGDHHRHELLPG +PLRPQRH VRQA + R QRQAPPL HHRHR
Sbjct: 375 QDQMQEGPILLRQDGDGDHHRHELLPGGALPLRPQRHSVRQARKARAQRQAPPLRHHRHR 554
Query: 543 VHQGAV 560
VH GAV
Sbjct: 555 VHTGAV 572
Score = 77.6 bits (163), Expect(2) = 7e-027
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = -1 / -2
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
P GAG VLPA +LVA AASLAVLEQWLV+AG HG E VLVGVLE
Sbjct: 414 PAGAGLVLPASDLVA*AASLAVLEQWLVAAGGHGRERVLVGVLE 283
Score = 69.3 bits (145), Expect(2) = 2e-021
Identities = 28/36 (77%), Positives = 28/36 (77%)
Frame = -3 / -1
Query: 376 CTESCSRSRIPCRP*TMAGFRRSPWT*RGTGWCA*S 269
C SCS SRIPCRP*TMAG RR WT GTGWCA*S
Sbjct: 388 CI*SCSMSRIPCRP*TMAGCRRRSWTRTGTGWCA*S 281
Score = 63.8 bits (133), Expect(2) = 7e-027
Identities = 28/35 (80%), Positives = 28/35 (80%)
Frame = -3 / -1
Query: 556 APW*TRCR*CPSGGACR*GRTWPACRTPCR*GRSG 452
AP *TRCR*C SGGACR* R ACRT CR*GRSG
Sbjct: 568 APV*TRCR*CRSGGACR*ARALRACRTLCR*GRSG 464
Score = 53.8 bits (111), Expect(2) = 2e-021
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = -1 / -2
Query: 561 ARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
ARHP ELDVDDA VAE VVE GL +PAER AA
Sbjct: 573 ARHPCELDVDDAGVAEPVVEPGLCEPAERCAA 478
>gb|BF618493.2|BF618493 HVSMEc0005N13f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0005N13f, mRNA sequence
Length = 798
Score = 296 bits (640), Expect(2) = 1e-084
Identities = 112/139 (80%), Positives = 119/139 (85%)
Frame = +1 / +2
Query: 157 NFNTSEAAVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFK 336
+ N ++A YWGPW ARATWYGQPNGAGPDDNGGACGFKHTNQYPF SM SCGNQPLFK
Sbjct: 164 DLNVTDATKYWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCGNQPLFK 343
Query: 337 DGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKL 516
DGKGCGSCYKIRCRKD SCSGRTET IITDMNYYP + YH+DL+GTAFG+L K GLNDKL
Sbjct: 344 DGKGCGSCYKIRCRKDQSCSGRTETGIITDMNYYPGAPYHYDLNGTAFGKLPKPGLNDKL 523
Query: 517 RHSGIIDIEFTRVPCEFPG 573
RHSGIIDIEFT PG
Sbjct: 524 RHSGIIDIEFTPEAVPIPG 580
Score = 244 bits (528), Expect(2) = 3e-069
Identities = 105/138 (76%), Positives = 108/138 (78%)
Frame = -2 / -1
Query: 572 PGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPE 393
PG + VNSMSMMPEWRSLSL P SLPNAVPLRS W G**FMSVMI VSV PE
Sbjct: 579 PGIGTASGVNSMSMMPEWRSLSLSPGFGSLPNAVPLRS*W*GAPG**FMSVMIPVSVLPE 400
Query: 392 QDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQV 213
QD SFLH IL* EPHPLPSLNNGW PQE MD GYWLVCLKP APPLSSGPAPLGWPYQV
Sbjct: 399 QDWSFLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCLKPQAPPLSSGPAPLGWPYQV 220
Query: 212 ARAFCQGPQYTAASLVLK 159
A A QGPQY AS+ L+
Sbjct: 219 ALAGVQGPQYLVASVTLR 166
Score = 195 bits (421), Expect = 4e-049
Identities = 77/98 (78%), Positives = 86/98 (87%)
Frame = +3 / +1
Query: 261 CVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPVLLRADGDGDHHRHELLP 440
C+RLQAHQPVP+ VH LLR+PAIVQGRQGMRL+LQD +QEGP+LLR DGDGDHHRHELLP
Sbjct: 268 CLRLQAHQPVPVRVHDLLRQPAIVQGRQGMRLMLQDQMQEGPILLRQDGDGDHHRHELLP 447
Query: 441 GVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQG 554
G +PL PQR+GVRQA + R QRQAPPL HHRHRVH G
Sbjct: 448 GGALPL*PQRNGVRQATKTRAQRQAPPLRHHRHRVHTG 561
Score = 77.6 bits (163), Expect(3) = 7e-029
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = -1 / -3
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
P GAG VLPA +LVA AASLAVLEQWLV+AG HG E VLVGVLE
Sbjct: 409 PAGAGLVLPASDLVA*AASLAVLEQWLVAAGGHGRERVLVGVLE 278
Score = 59.3 bits (123), Expect(3) = 7e-029
Identities = 26/34 (76%), Positives = 26/34 (76%)
Frame = -3 / -2
Query: 553 PW*TRCR*CPSGGACR*GRTWPACRTPCR*GRSG 452
P *TRCR*C SGGACR* R ACRTP R*G SG
Sbjct: 560 PV*TRCR*CRSGGACR*ARVLVACRTPFR*GHSG 459
Score = 38.6 bits (78), Expect(2) = 1e-084
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1 / +3
Query: 550 RVPCEFPGLKIGFHVEEYSSP 612
R PC+FPGLKI H++EY +P
Sbjct: 558 RRPCQFPGLKIRIHMKEYLNP 620
Score = 38.6 bits (78), Expect(2) = 3e-069
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -2
Query: 612 GARVLLHVEPDLEARELARHP 550
G +VL HV+PDLE RELAR P
Sbjct: 620 GVQVLFHVDPDLEPRELARPP 558
Score = 29.0 bits (57), Expect(3) = 7e-029
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2 / -3
Query: 611 GLEYSSTWNPILRPGNSHG 555
G +YS W IL PGN HG
Sbjct: 619 GFKYSFMWILILSPGNWHG 563
>gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_H22 5', mRNA sequence
Length = 631
Score = 310 bits (671), Expect = 1e-083
Identities = 121/154 (78%), Positives = 129/154 (83%)
Frame = +1 / +3
Query: 169 SEAAVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKG 348
+ A Y W ARATWYG PNGAGPDDNGGACGFKH NQYPF SM SCGNQPLFKDGKG
Sbjct: 168 TSAVSYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGNQPLFKDGKG 347
Query: 349 CGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSG 528
CGSCY+IRC D SCSG ETV+ITDMNYYPV++YHFDLSGTAFG LAKSGLN+KLRHSG
Sbjct: 348 CGSCYQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSG 527
Query: 529 IIDIEFTRVPCEFPGLKIGFHVEEYSSPVYFAVL 630
IIDI+F RVPC FPGLKI FHV E S+ VY AVL
Sbjct: 528 IIDIQFKRVPCNFPGLKINFHVVEGSNAVYLAVL 629
Score = 248 bits (535), Expect = 7e-065
Identities = 105/140 (75%), Positives = 112/140 (80%)
Frame = -2 / -1
Query: 623 AK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLD 444
A+ T LE S+TW ILRPG HGTL+N MSMMPEWRS SLRPDLA P AVPLRSKWY
Sbjct: 622 ARYTALEPSTTWKLILRPGKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWA 443
Query: 443 TG**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPH 264
TG**FMSV+ITVS+ PEQ+ S LHRI *QEP PLPSLN GW PQE M+ KGYW CLKP
Sbjct: 442 TG**FMSVIITVSMLPEQERSPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFTCLKPQ 263
Query: 263 APPLSSGPAPLGWPYQVARA 204
APPLSSGPAPLG PYQVA A
Sbjct: 262 APPLSSGPAPLGAPYQVALA 203
Score = 192 bits (413), Expect = 5e-048
Identities = 81/138 (58%), Positives = 100/138 (72%)
Frame = +3 / +2
Query: 195 LAEGPGHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSV 374
+A G LV +RLQA +PVPL +H LLR+PA VQGRQG+RLLL D++
Sbjct: 194 VAPGQSDLVRSAQRRRARRQRRRLRLQAREPVPLLLHDLLRQPAPVQGRQGLRLLLPDTM 373
Query: 375 QEGPVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQG 554
Q P+LLR DGD HRHELLPG VPL P+RHG+R+ GQV PQR+APPLGHHRH V +G
Sbjct: 374 QRRPLLLRQHRDGDDHRHELLPGRPVPL*PERHGLRRPGQVGPQREAPPLGHHRHPVQEG 553
Query: 555 AVRVPWPQDRVPRGGVLE 608
AV++P PQD++PRGG L+
Sbjct: 554 AVQLPRPQDQLPRGGGLQ 607
Score = 79.4 bits (167), Expect(2) = 1e-027
Identities = 38/53 (71%), Positives = 41/53 (77%)
Frame = -1 / -3
Query: 624 REVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
R+V L HVE DLEA E+ARHP ELDVDDARVAEL+VEA LGQ AE RAA
Sbjct: 623 RQVHRVGALHHVEVDLEAGEVARHPLELDVDDARVAELLVEARLGQGAEGRAA 465
Score = 64.3 bits (134), Expect(2) = 1e-027
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = -1 / -3
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V A LVAGAA+LAVLEQ LV+AG HG EGVLV VLE
Sbjct: 395 GAGAVAAASYLVAGAAALAVLEQGLVAAGGHGGEGVLVHVLE 270
>gb|BI959328.1|BI959328 HVSMEn0019E09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019E09f, mRNA sequence
Length = 699
Score = 240 bits (519), Expect(3) = 3e-083
Identities = 90/114 (78%), Positives = 96/114 (84%)
Frame = +1 / +2
Query: 157 NFNTSEAAVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFK 336
+ N S+A YWGPW ARATWYGQPNGAGPDDNGGACGFKHTNQYPF SM CGNQPLFK
Sbjct: 173 DLNGSDATKYWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTFCGNQPLFK 352
Query: 337 DGKGCGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKS 498
DGKGCGSCYKIRCRKD SCSG+TETVIITDMNYYP + YHFDL TA + K+
Sbjct: 353 DGKGCGSCYKIRCRKDQSCSGKTETVIITDMNYYPGAPYHFDLHRTAVPQARKA 514
Score = 193 bits (416), Expect(2) = 6e-058
Identities = 84/112 (75%), Positives = 87/112 (77%)
Frame = -2 / -1
Query: 494 LASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFP 315
L + AV RSKW G**FMSVMITVSV PEQD SFLH IL* EPHPLPSLNNGW P
Sbjct: 510 LRACGTAVR*RSKW*GAPG**FMSVMITVSVLPEQDWSFLHLIL*HEPHPLPSLNNGWLP 331
Query: 314 QEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQVARAFCQGPQYTAASLVLK 159
Q+ MD GYWLVCLKP APPLSSGPAPLGWPYQVA A QGPQY ASL L+
Sbjct: 330 QKVMDANGYWLVCLKPQAPPLSSGPAPLGWPYQVALAGVQGPQYLVASLPLR 175
Score = 157 bits (338), Expect(2) = 2e-040
Identities = 65/98 (66%), Positives = 72/98 (73%)
Frame = +3 / +1
Query: 183 VLGPLAEGPGHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLL 362
VLGPL G G LV WC+RLQAHQPVP+ VH LLR+PAIVQGRQGMRL+L
Sbjct: 199 VLGPLDPGQGDLVWPAQWRRPRRQRWCLRLQAHQPVPVRVHDLLRQPAIVQGRQGMRLML 378
Query: 363 QDSVQEGPVLLRADGDGDHHRHELLPGVQVPLRPQRHG 476
QD +QE P+LLR DGD DHHRHELLPG +PLRP HG
Sbjct: 379 QDQMQERPILLRQDGDRDHHRHELLPGGALPLRPSPHG 492
Score = 61.6 bits (128), Expect(3) = 3e-083
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +1 / +3
Query: 478 FGRLAKSGLNDKLRHSGIIDIEFTRVPCEFPGLKI 582
F RLAK GLND+LRHS IIDIE RV EFPGLKI
Sbjct: 495 FRRLAKPGLNDRLRHSRIIDIELQRVAGEFPGLKI 599
Score = 51.9 bits (107), Expect(2) = 6e-058
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = -2 / -3
Query: 581 ILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPN 477
IL PGNS T NSMS++ EWRSLSL P ASL N
Sbjct: 598 ILSPGNSPATRCNSMSIIREWRSLSLSPGFASLRN 494
Score = 46.9 bits (96), Expect(3) = 3e-083
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1 / +1
Query: 556 PCEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLME 681
P G + GFHVE S+P+YF+ L Y+DG+ ++VQ D ME
Sbjct: 574 PASSRGSRYGFHVEGDSNPLYFSGLGGYQDGNRNLVQGDPME 699
Score = 29.0 bits (57), Expect(2) = 2e-040
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2 / +2
Query: 572 ASRSGSTWRSTRAPSTSR 625
A +GSTWR TR P T R
Sbjct: 590 AQDTGSTWRETRTPFTFR 643
>gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020N13f, mRNA sequence
Length = 630
Score = 308 bits (668), Expect = 3e-083
Identities = 116/147 (78%), Positives = 131/147 (89%)
Frame = +1 / +3
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W+ ARATWYG P GAGP D+GGACGFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 189 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 368
Query: 376 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRV 555
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AK GL++KLRHSGIIDI+F RV
Sbjct: 369 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 548
Query: 556 PCEFPGLKIGFHVEEYSSPVYFAVLVE 636
PCEFPGLK+ FHVE+ S+PVYFAVLVE
Sbjct: 549 PCEFPGLKVTFHVEQGSNPVYFAVLVE 629
Score = 232 bits (501), Expect = 3e-060
Identities = 102/143 (71%), Positives = 108/143 (75%)
Frame = -2 / -3
Query: 623 AK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLD 444
AK TG + STW LRPGNSHGTL+N MSMMPE RS SLRP LA PNAVPLRSKWYL
Sbjct: 616 AKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLA 437
Query: 443 TG**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPH 264
TG**FMSVM TVS PEQD S +HRI *QEPHPLPSL G P + M+ KGYWLV L PH
Sbjct: 436 TG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPH 257
Query: 263 APPLSSGPAPLGWPYQVARAFCQ 195
APP S GPAP+G PYQVA A Q
Sbjct: 256 APPSSMGPAPVGAPYQVALASSQ 188
Score = 194 bits (419), Expect = 7e-049
Identities = 80/133 (60%), Positives = 94/133 (70%)
Frame = +3 / +2
Query: 210 GHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPV 389
GHLV WCVR+Q HQPVPL +H ++R+ A +QG QGMRLLL D+V + PV
Sbjct: 203 GHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRPV 382
Query: 390 LLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVP 569
LLR GDG HHRHELLPG QVPLRP+ H VR+ GQ RPQR+AP L HHRH V + AVRVP
Sbjct: 383 LLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESAVRVP 562
Query: 570 WPQDRVPRGGVLE 608
W Q +PRG +E
Sbjct: 563 WSQGDLPRGAGVE 601
Score = 70.3 bits (147), Expect(2) = 2e-025
Identities = 34/51 (66%), Positives = 36/51 (70%)
Frame = -1 / -2
Query: 621 EVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRA 469
+V R LLHVE LE RELARH ELDVDDA V EL+ EAGLG AER A
Sbjct: 614 KVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 462
Score = 66.6 bits (139), Expect(2) = 2e-025
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1 / -2
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V+ AP LVAGAASLA+LE LV+A HG EGVLVGVLE
Sbjct: 389 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 264
>gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020K03f, mRNA sequence
Length = 679
Score = 301 bits (651), Expect = 7e-081
Identities = 113/151 (74%), Positives = 130/151 (86%)
Frame = +1 / +2
Query: 190 GPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKI 369
G W+ ARATWYG P GAGP D+GGACGFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+I
Sbjct: 182 GGWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQI 361
Query: 370 RCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFT 549
RC D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AK GL++KL HSGIIDI+F
Sbjct: 362 RCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLPHSGIIDIQFK 541
Query: 550 RVPCEFPGLKIGFHVEEYSSPVYFAVLVEYE 642
RVPCEFPGLK+ FHVE+ S+PVYF LV ++
Sbjct: 542 RVPCEFPGLKVTFHVEQGSNPVYFPRLVGFQ 634
Score = 224 bits (484), Expect = 7e-058
Identities = 101/144 (70%), Positives = 107/144 (74%)
Frame = -2 / -2
Query: 620 K*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDT 441
K TGL+ ST LRPGNSHGTL+N MSMMPE S SLRP LA PNAVPLRSKWYL T
Sbjct: 612 KYTGLDPCST*KVTLRPGNSHGTLLNWMSMMPECGSFSLRPGLAMAPNAVPLRSKWYLAT 433
Query: 440 G**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHA 261
G**FMSVM TVS PEQD S +HRI *QEPHPLPSL G P + M+ KGYWLV L PHA
Sbjct: 432 G**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHA 253
Query: 260 PPLSSGPAPLGWPYQVARAFCQGP 189
PP S GPAP+G PYQVA A Q P
Sbjct: 252 PPSSMGPAPVGAPYQVALASSQPP 181
Score = 190 bits (409), Expect = 2e-047
Identities = 78/129 (60%), Positives = 91/129 (70%)
Frame = +3 / +1
Query: 210 GHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPV 389
GHLV WCVR+Q HQPVPL +H ++R+ A +QG QGMRLLL D+V + PV
Sbjct: 202 GHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRPV 381
Query: 390 LLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVP 569
LLR GDG HHRHELLPG QVPLRP+ H VR+ GQ RPQR+AP L HHRH V + AVRVP
Sbjct: 382 LLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESAVRVP 561
Query: 570 WPQDRVPRG 596
W Q + RG
Sbjct: 562 WSQSDLSRG 588
Score = 68.9 bits (144), Expect(2) = 4e-025
Identities = 33/51 (64%), Positives = 35/51 (68%)
Frame = -1 / -1
Query: 621 EVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRA 469
EV G LLHV+ E RELARH ELDVDDA V EL+ EAGLG AER A
Sbjct: 613 EVHGVGPLLHVKGHFETRELARHSLELDVDDAGVRELLAEAGLGHGAERGA 461
Score = 66.6 bits (139), Expect(2) = 4e-025
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1 / -1
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V+ AP LVAGAASLA+LE LV+A HG EGVLVGVLE
Sbjct: 388 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 263
>gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024E17f, mRNA sequence
Length = 875
Score = 275 bits (595), Expect(2) = 8e-081
Identities = 102/128 (79%), Positives = 114/128 (89%)
Frame = +1 / +3
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W+ ARATWYG P GAGP D+GGACGFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 180 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 359
Query: 376 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRV 555
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AK GL++KLRHSGIIDI+F RV
Sbjct: 360 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 539
Query: 556 PCEFPGLK 579
PCEFPGLK
Sbjct: 540 PCEFPGLK 563
Score = 215 bits (464), Expect = 4e-055
Identities = 94/128 (73%), Positives = 99/128 (77%)
Frame = -2 / -2
Query: 578 LRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVR 399
L PGNSHGTL+N MSMMPE RS SLRP LA PNAVPLRSKWYL TG**FMSVM TVS
Sbjct: 562 LSPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGL 383
Query: 398 PEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPY 219
PEQD S +HRI *QEPHPLPSL G P + M+ KGYWLV L PHAPP S GPAP+G PY
Sbjct: 382 PEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPY 203
Query: 218 QVARAFCQ 195
QVA A Q
Sbjct: 202 QVALASSQ 179
Score = 186 bits (400), Expect = 3e-046
Identities = 76/123 (61%), Positives = 88/123 (71%)
Frame = +3 / +2
Query: 210 GHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPV 389
GHLV WCVR+Q HQPVPL +H ++R+ A +QG QGMRLLL D+V + PV
Sbjct: 194 GHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRPV 373
Query: 390 LLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVP 569
LLR GDG HHRHELLPG QVPLRP+ H VR+ GQ RPQR+AP L HHRH V + AVRVP
Sbjct: 374 LLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESAVRVP 553
Query: 570 WPQ 578
W Q
Sbjct: 554 WAQ 562
Score = 66.6 bits (139), Expect(2) = 1e-021
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1 / -1
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V+ AP LVAGAASLA+LE LV+A HG EGVLVGVLE
Sbjct: 380 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 255
Score = 57.4 bits (119), Expect(2) = 1e-021
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = -1 / -1
Query: 579 LEARELARHPGELDVDDARVAELVVEAGLGQPAERRA 469
LE RELARH ELDVDDA V EL+ EAGLG AER A
Sbjct: 563 LEPRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 453
Score = 46.4 bits (95), Expect(2) = 8e-081
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +1 / +2
Query: 568 PGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVD 672
P ++ HVE+ +PVYF VLVEYED D +V VD
Sbjct: 551 PWAQVXLHVEQGYNPVYFTVLVEYEDRDRYLVHVD 655
>gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020P05f, mRNA sequence
Length = 615
Score = 297 bits (642), Expect = 1e-079
Identities = 111/144 (77%), Positives = 125/144 (86%)
Frame = +1 / +3
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W+ ARATWYG P GAGP D+GGACGF +TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 183 WEDARATWYGAPTGAGPMDDGGACGFNNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 362
Query: 376 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRV 555
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AK GL++KLRHSGIIDI+F RV
Sbjct: 363 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 542
Query: 556 PCEFPGLKIGFHVEEYSSPVYFAV 627
PCEFPGL + FHVE S+PVYFAV
Sbjct: 543 PCEFPGLNVTFHVEXGSNPVYFAV 614
Score = 232 bits (502), Expect = 2e-060
Identities = 102/143 (71%), Positives = 108/143 (75%)
Frame = -2 / -3
Query: 623 AK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLD 444
AK TG + STW LRPGNSHGTL+N MSMMPE RS SLRP LA PNAVPLRSKWYL
Sbjct: 610 AKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLA 431
Query: 443 TG**FMSVMITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPH 264
TG**FMSVM TVS PEQD S +HRI *QEPHPLPSL G P + M+ KGYWLV L PH
Sbjct: 430 TG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVLLNPH 251
Query: 263 APPLSSGPAPLGWPYQVARAFCQ 195
APP S GPAP+G PYQVA A Q
Sbjct: 250 APPSSMGPAPVGAPYQVALASSQ 182
Score = 193 bits (417), Expect = 1e-048
Identities = 80/133 (60%), Positives = 94/133 (70%)
Frame = +3 / +2
Query: 210 GHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPV 389
GHLV WCVR+Q HQPVPL +H ++R+ A +QG QGMRLLL D+V + PV
Sbjct: 197 GHLVRRAHGCRPHGRRWCVRVQ*HQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRPV 376
Query: 390 LLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVP 569
LLR GDG HHRHELLPG QVPLRP+ H VR+ GQ RPQR+AP L HHRH V + AVRVP
Sbjct: 377 LLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESAVRVP 556
Query: 570 WPQDRVPRGGVLE 608
W Q +PRG +E
Sbjct: 557 WSQRDLPRGAXVE 595
Score = 68.4 bits (143), Expect(2) = 1e-024
Identities = 33/51 (64%), Positives = 35/51 (68%)
Frame = -1 / -2
Query: 621 EVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRA 469
EV R LHVE +E RELARH ELDVDDA V EL+ EAGLG AER A
Sbjct: 608 EVHRVRPXLHVEGHVETRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 456
Score = 65.7 bits (137), Expect(2) = 1e-024
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = -1 / -2
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V+ AP LVAGAASLA+LE LV+A HG EGVLVGV+E
Sbjct: 383 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVIE 258
>gb|AV923254.1|AV923254 AV923254 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd12g18 5', mRNA sequence
Length = 616
Score = 297 bits (642), Expect = 1e-079
Identities = 114/144 (79%), Positives = 122/144 (84%)
Frame = +1 / +1
Query: 169 SEAAVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKG 348
+ A Y W ARATWYG PNGAGPDDNGGACGFKH NQYPF SM SCG+QPLFKDGKG
Sbjct: 184 TSAVSYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGSQPLFKDGKG 363
Query: 349 CGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSG 528
CGSCY+IRC D SCSG ETV+ITDMNYYPV++YHFDLSGTAFG LAKSGLN+KLRHSG
Sbjct: 364 CGSCYQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSG 543
Query: 529 IIDIEFTRVPCEFPGLKIGFHVEE 600
IIDI+F RVPC FPGLKI FHV E
Sbjct: 544 IIDIQFRRVPCNFPGLKINFHVVE 615
Score = 242 bits (522), Expect = 4e-063
Identities = 101/132 (76%), Positives = 107/132 (81%)
Frame = -2 / -3
Query: 599 SSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSV 420
S+TW ILRPG HGTL+N MSMMPEWRS SLRPDLA P AVPLRSKWY TG**FMSV
Sbjct: 614 STTWKLILRPGKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSV 435
Query: 419 MITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGP 240
+ITVS+ PEQ+ S LHRI *QEP PLPSLN GW PQE M+ KGYW CLKP APPLSSGP
Sbjct: 434 IITVSMLPEQERSPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFTCLKPQAPPLSSGP 255
Query: 239 APLGWPYQVARA 204
APLG PYQVA A
Sbjct: 254 APLGAPYQVALA 219
Score = 190 bits (410), Expect = 1e-047
Identities = 80/135 (59%), Positives = 98/135 (72%)
Frame = +3 / +3
Query: 195 LAEGPGHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSV 374
+A G LV +RLQA +PVPL +H LLR+PA VQGRQG+RLLL D++
Sbjct: 210 VAPGQSDLVRSAQRRRARRQRRRLRLQAREPVPLLLHDLLRQPAPVQGRQGLRLLLPDTM 389
Query: 375 QEGPVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQG 554
Q P+LLR DGD HRHELLPG VPL P+RHG+R+ GQV PQR+APPLGHHRH V +G
Sbjct: 390 QRRPLLLRQHRDGDDHRHELLPGRPVPL*PERHGLRRPGQVGPQREAPPLGHHRHPVQEG 569
Query: 555 AVRVPWPQDRVPRGG 599
AV++P PQD++PRGG
Sbjct: 570 AVQLPRPQDQLPRGG 614
Score = 77.6 bits (163), Expect(2) = 2e-026
Identities = 36/45 (80%), Positives = 38/45 (84%)
Frame = -1 / -2
Query: 600 LLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
L HVE DLEA E+ARHP ELDVDDARVAEL+VEA LGQ AE RAA
Sbjct: 615 LHHVEVDLEAGEVARHPPELDVDDARVAELLVEARLGQGAEGRAA 481
Score = 62.5 bits (130), Expect(2) = 2e-026
Identities = 30/42 (71%), Positives = 32/42 (76%)
Frame = -1 / -2
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V A LVAGAA+LAVLEQ L +AG HG EGVLV VLE
Sbjct: 411 GAGAVAAASYLVAGAAALAVLEQGLAAAGGHGGEGVLVHVLE 286
>gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL5B4 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 634
Score = 182 bits (392), Expect(2) = 2e-079
Identities = 70/103 (67%), Positives = 89/103 (86%)
Frame = +1 / +3
Query: 385 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRVPCE 564
P+CSG +TVIITDMNY PVS+YHFDLSGTAFG +AK G ND+LRH+GII+++F RVPC+
Sbjct: 315 PACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQ 494
Query: 565 FPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMESKTA 693
+PGL + FHVEE S+P Y A+L EYE+GDGDV Q+D+MES+T+
Sbjct: 495 YPGLTVTFHVEEXSNPFYMAILGEYENGDGDVKQLDIMESRTS 623
Score = 134 bits (288), Expect(2) = 2e-079
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +1 / +3
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W A+ATWYG+P GAGPDDNGGACGFK+ N PF SM SCGNQPLFKDGKGCGSCY+IRC
Sbjct: 120 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 299
Score = 104 bits (222), Expect(2) = 2e-030
Identities = 43/75 (57%), Positives = 52/75 (69%)
Frame = +3 / +2
Query: 384 PVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVR 563
P +LR DGDHHRHEL PG+ +PLRPQ H +R GQVR QR+APP H++H V +GAV
Sbjct: 314 PCVLRCAQDGDHHRHELRPGLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAVP 493
Query: 564 VPWPQDRVPRGGVLE 608
VP V RGG +E
Sbjct: 494 VPGVDGDVSRGGGVE 538
Score = 104 bits (221), Expect(2) = 1e-044
Identities = 53/102 (51%), Positives = 58/102 (56%)
Frame = -2 / -1
Query: 689 VLDSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSL 510
V DSI A * G + SST N + PG HGTL+N M +MP WRS
Sbjct: 619 VRDSIMSSCFTSPSPFSYSPRIAM*NGFDXSST*NVTVNPGYWHGTLLNCMLIMPAWRSS 440
Query: 509 SLRPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 384
SLRP LA P AVPLRSKW +TG *FMSVMITV PE G
Sbjct: 439 SLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHAG 314
Score = 96.8 bits (205), Expect(2) = 1e-044
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = -2 / -1
Query: 380 FLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQVARAF 201
F H I *QEP PLPSL +GW PQE M+ KG L L PHAPPLSSGPAP+G PY VA A
Sbjct: 304 FKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPPLSSGPAPVGLPYHVALAS 125
Query: 200 CQ 195
Q
Sbjct: 124 SQ 119
Score = 48.7 bits (100), Expect(2) = 2e-030
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3 / +2
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSV 374
VR+Q Q L +H LLR+P +QGRQG+RLLL D V
Sbjct: 188 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKV 298
>gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL94h5 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 661
Score = 182 bits (391), Expect(2) = 2e-079
Identities = 70/101 (69%), Positives = 88/101 (87%)
Frame = +1 / +2
Query: 385 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRVPCE 564
P+CSG +TVIITDMNY PVS+YHFDLSGTAFG +AK G ND+LRH+GII+++F RVPC+
Sbjct: 314 PACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQ 493
Query: 565 FPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMESK 687
+PGL + FHVEE S+P Y A+LVEYE+GDGDV Q+D+MES+
Sbjct: 494 YPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESR 616
Score = 134 bits (288), Expect(2) = 2e-079
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +1 / +1
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W A+ATWYG+P GAGPDDNGGACGFK+ N PF SM SCGNQPLFKDGKGCGSCY+IRC
Sbjct: 118 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 297
Score = 110 bits (234), Expect(2) = 5e-046
Identities = 53/100 (53%), Positives = 58/100 (58%)
Frame = -2 / -2
Query: 683 DSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSL 504
DSI A * G + SSTWN + PG HGTL+N M +MP WRS SL
Sbjct: 612 DSIMSSCFTSPSPFSYSTRIAM*NGFDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSL 433
Query: 503 RPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 384
RP LA P AVPLRSKW +TG *FMSVMITV PE G
Sbjct: 432 RPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHAG 313
Score = 108 bits (230), Expect(2) = 3e-032
Identities = 44/75 (58%), Positives = 53/75 (70%)
Frame = +3 / +1
Query: 384 PVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVR 563
P +LR DGDHHRHEL PG+ +PLRPQ H +R GQVR QR+APP H++H V +GAV
Sbjct: 313 PCVLRCAQDGDHHRHELRPGLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAVP 492
Query: 564 VPWPQDRVPRGGVLE 608
VP VPRGG +E
Sbjct: 493 VPGVDGDVPRGGGVE 537
Score = 95.5 bits (202), Expect(2) = 5e-046
Identities = 41/63 (65%), Positives = 44/63 (69%)
Frame = -2 / -3
Query: 383 SFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQVARA 204
S H I *QEP PLPSL +GW PQE M+ KG L L PHAPPLSSGPAP+G PY VA A
Sbjct: 305 SXKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPPLSSGPAPVGLPYHVALA 126
Query: 203 FCQ 195
Q
Sbjct: 125 SSQ 117
Score = 51.0 bits (105), Expect(2) = 3e-032
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = +3 / +3
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPVLLRA 401
VR+Q Q L +H LLR+P +QGRQG+RLLL D V LRA
Sbjct: 186 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKVLXTRTTLRA 323
>gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. vulgare cDNA clone HA22I03
5-PRIME, mRNA sequence
Length = 597
Score = 182 bits (391), Expect(2) = 2e-079
Identities = 70/101 (69%), Positives = 88/101 (87%)
Frame = +1 / +1
Query: 385 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRVPCE 564
P+CSG +TVIITDMNY PVS+YHFDLSGTAFG +AK G ND+LRH+GII+++F RVPC+
Sbjct: 268 PACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQ 447
Query: 565 FPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMESK 687
+PGL + FHVEE S+P Y A+LVEYE+GDGDV Q+D+MES+
Sbjct: 448 YPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESR 570
Score = 134 bits (288), Expect(2) = 2e-079
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +1 / +1
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W A+ATWYG+P GAGPDDNGGACGFK+ N PF SM SCGNQPLFKDGKGCGSCY+IRC
Sbjct: 73 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 252
Score = 111 bits (238), Expect(2) = 6e-047
Identities = 54/100 (54%), Positives = 59/100 (59%)
Frame = -2 / -2
Query: 683 DSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSL 504
DSI A * GL+ SSTWN + PG HGTL+N M +MP WRS SL
Sbjct: 566 DSIMSSCFTSPSPFSYSTRIAM*NGLDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSL 387
Query: 503 RPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 384
RP LA P AVPLRSKW +TG *FMSVMITV PE G
Sbjct: 386 RPYLAMAPKAVPLRSKW*RETGS*FMSVMITVFGTPEHAG 267
Score = 100 bits (214), Expect(2) = 2e-029
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +3 / +3
Query: 384 PVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVR 563
P +LR DGDH+RHEL P + +PLRPQ H +R GQVR QR+APP H++H V +GAV
Sbjct: 267 PCVLRCAEDGDHNRHELRPSLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAVP 446
Query: 564 VPWPQDRVPRGG 599
VP VPRGG
Sbjct: 447 VPGVDGDVPRGG 482
Score = 96.8 bits (205), Expect(2) = 6e-047
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = -2 / -2
Query: 380 FLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQVARAF 201
F H I *QEP PLPSL +GW PQE M+ KG L L PHAPPLSSGPAP+G PY VA A
Sbjct: 257 FKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPPLSSGPAPVGLPYHVALAS 78
Query: 200 CQ 195
Q
Sbjct: 77 SQ 72
Score = 48.7 bits (100), Expect(2) = 2e-029
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3 / +3
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSV 374
VR+Q Q L +H LLR+P +QGRQG+RLLL D V
Sbjct: 141 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKV 251
>gb|CV060955.1|CV060955 BNEL63c5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL63c5 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 634
Score = 134 bits (288), Expect(4) = 1e-078
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +1 / +2
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W A+ATWYG+P GAGPDDNGGACGFK+ N PF SM SCGNQPLFKDGKGCGSCY+IRC
Sbjct: 62 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 241
Score = 116 bits (249), Expect(4) = 1e-078
Identities = 44/71 (61%), Positives = 59/71 (83%)
Frame = +1 / +3
Query: 475 AFGRLAKSGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDG 654
AFG +AK G ND+LRH+GII+++F RVPC++P L + FHVEE S+P Y +LVEYE+GDG
Sbjct: 348 AFGGMAKYGRNDELRHAGIINMQFKRVPCQYPXLTVTFHVEEGSNPFYMGILVEYENGDG 527
Query: 655 DVVQVDLMESK 687
DV Q+D+MES+
Sbjct: 528 DVKQLDIMESR 560
Score = 96.8 bits (205), Expect(3) = 8e-040
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = -2 / -2
Query: 380 FLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQVARAF 201
F H I *QEP PLPSL +GW PQE M+ KG L L PHAPPLSSGPAP+G PY VA A
Sbjct: 246 FKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPPLSSGPAPVGLPYHVALAS 67
Query: 200 CQ 195
Q
Sbjct: 66 SQ 61
Score = 63.4 bits (132), Expect(4) = 1e-078
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1 / +2
Query: 385 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGR 486
P+CSG +TVIITDMNY PVS+YHFDLSGT R
Sbjct: 257 PACSGVPKTVIITDMNYDPVSRYHFDLSGTRLRR 358
Score = 61.1 bits (127), Expect(3) = 8e-040
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = -2 / -1
Query: 617 *TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNA 474
* G + SSTWN + G HGTL+N M +MP WRS SLRP LA P A
Sbjct: 490 *NGFDPSSTWNVTVNXGYWHGTLLNCMLIMPAWRSSSLRPYLAMPPKA 347
Score = 57.9 bits (120), Expect(3) = 1e-027
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +3 / +2
Query: 477 VRQAGQVRPQRQAPPLGHHRHRVHQGAVRVPWPQDRVPRGGVLE 608
+R+ GQVR QR+APP H++H V +GAV VP VPRGG +E
Sbjct: 350 LRRHGQVRTQRRAPPRRHYQHAVQEGAVPVPGVDGDVPRGGGVE 481
Score = 55.1 bits (114), Expect(3) = 1e-027
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +3 / +1
Query: 384 PVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQA 488
P +LR DGDHHRHEL PG+ +PLRPQ H +A
Sbjct: 256 PCVLRCAQDGDHHRHELRPGLPLPLRPQWHPPSEA 360
Score = 48.7 bits (100), Expect(3) = 1e-027
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3 / +1
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSV 374
VR+Q Q L +H LLR+P +QGRQG+RLLL D V
Sbjct: 130 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKV 240
Score = 45.1 bits (92), Expect(3) = 8e-040
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -2 / -2
Query: 485 LPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 384
L VPLRSKW +TG *FMSVMITV PE G
Sbjct: 357 LRRRVPLRSKW*RETGS*FMSVMITVLGTPEHAG 256
Score = 36.8 bits (74), Expect(4) = 1e-078
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1 / +3
Query: 703 PTGRWAPMRESWGS 744
PTG+W PM+ESWGS
Sbjct: 591 PTGQWVPMKESWGS 632
>gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. vulgare cDNA clone HA05E07
5-PRIME, mRNA sequence
Length = 504
Score = 179 bits (385), Expect(2) = 2e-078
Identities = 69/99 (69%), Positives = 86/99 (86%)
Frame = +1 / +2
Query: 385 PSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRVPCE 564
P+CSG +TVIITDMNY PVS+YHFDLSGTAFG +AK G ND+LRH+GII+++F RVPC+
Sbjct: 206 PACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQ 385
Query: 565 FPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLME 681
+PGL + FHVEE S+P Y A+LVEYE+GDGDV Q+D+ME
Sbjct: 386 YPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIME 502
Score = 134 bits (288), Expect(2) = 2e-078
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +1 / +2
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W A+ATWYG+P GAGPDDNGGACGFK+ N PF SM SCGNQPLFKDGKGCGSCY+IRC
Sbjct: 11 WLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 190
Score = 111 bits (238), Expect(2) = 6e-047
Identities = 54/100 (54%), Positives = 59/100 (59%)
Frame = -2 / -1
Query: 683 DSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEWRSLSL 504
DSI A * GL+ SSTWN + PG HGTL+N M +MP WRS SL
Sbjct: 504 DSIMSSCFTSPSPFSYSTRIAM*NGLDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSL 325
Query: 503 RPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQDG 384
RP LA P AVPLRSKW +TG *FMSVMITV PE G
Sbjct: 324 RPYLAMAPKAVPLRSKW*RETGS*FMSVMITVFGTPEHAG 205
Score = 100 bits (214), Expect(2) = 2e-029
Identities = 41/72 (56%), Positives = 50/72 (69%)
Frame = +3 / +1
Query: 384 PVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVR 563
P +LR DGDH+RHEL P + +PLRPQ H +R GQVR QR+APP H++H V +GAV
Sbjct: 205 PCVLRCAEDGDHNRHELRPSLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAVP 384
Query: 564 VPWPQDRVPRGG 599
VP VPRGG
Sbjct: 385 VPGVDGDVPRGG 420
Score = 96.8 bits (205), Expect(2) = 6e-047
Identities = 41/62 (66%), Positives = 44/62 (70%)
Frame = -2 / -1
Query: 380 FLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQVARAF 201
F H I *QEP PLPSL +GW PQE M+ KG L L PHAPPLSSGPAP+G PY VA A
Sbjct: 195 FKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPPLSSGPAPVGLPYHVALAS 16
Query: 200 CQ 195
Q
Sbjct: 15 SQ 10
Score = 48.7 bits (100), Expect(2) = 2e-029
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3 / +1
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSV 374
VR+Q Q L +H LLR+P +QGRQG+RLLL D V
Sbjct: 79 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKV 189
>gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021G03f, mRNA sequence
Length = 682
Score = 275 bits (595), Expect(2) = 6e-078
Identities = 102/128 (79%), Positives = 114/128 (89%)
Frame = +1 / +3
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W+ ARATWYG P GAGP D+GGACGFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 171 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 350
Query: 376 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRV 555
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AK GL++KLRHSGIIDI+F RV
Sbjct: 351 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 530
Query: 556 PCEFPGLK 579
PCEFPGLK
Sbjct: 531 PCEFPGLK 554
Score = 216 bits (466), Expect(2) = 7e-056
Identities = 94/127 (74%), Positives = 99/127 (77%)
Frame = -2 / -1
Query: 575 RPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRP 396
RPGNSHGTL+N MSMMPE RS SLRP LA PNAVPLRSKWYL TG**FMSVM TVS P
Sbjct: 550 RPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLP 371
Query: 395 EQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQ 216
EQD S +HRI *QEPHPLPSL G P + M+ KGYWLV L PHAPP S GPAP+G PYQ
Sbjct: 370 EQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQ 191
Query: 215 VARAFCQ 195
VA A Q
Sbjct: 190 VALASSQ 170
Score = 184 bits (396), Expect = 1e-045
Identities = 75/121 (61%), Positives = 87/121 (71%)
Frame = +3 / +2
Query: 210 GHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPV 389
GHLV WCVR+Q HQPVPL +H ++R+ A +QG QGMRLLL D+V + PV
Sbjct: 185 GHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRPV 364
Query: 390 LLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVP 569
LLR GDG HHRHELLPG QVPLRP+ H VR+ GQ RPQR+AP L HHRH V + AVRVP
Sbjct: 365 LLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESAVRVP 544
Query: 570 W 572
W
Sbjct: 545 W 547
Score = 66.6 bits (139), Expect(2) = 1e-021
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1 / -3
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V+ AP LVAGAASLA+LE LV+A HG EGVLVGVLE
Sbjct: 371 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 246
Score = 57.0 bits (118), Expect(2) = 1e-021
Identities = 24/34 (70%), Positives = 24/34 (70%)
Frame = -3 / -2
Query: 547 *TRCR*CPSGGACR*GRTWPACRTPCR*GRSGTW 446
*T CR*C S GA R*GR WP RT C GRSGTW
Sbjct: 522 *TGCR*CRSAGASR*GRAWPWRRTRCHSGRSGTW 421
Score = 36.8 bits (74), Expect(2) = 6e-078
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1 / +2
Query: 568 PGLKIGFHVEEYSSPVYFAVLVE 636
P K+ FHVE+ S+PVYFAVL E
Sbjct: 542 PWSKVTFHVEQGSNPVYFAVLGE 610
Score = 22.1 bits (42), Expect(2) = 7e-056
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2 / -2
Query: 623 AK*TGLEYSSTWNPILRPG 567
AK TGL+ STW L G
Sbjct: 597 AKYTGLDPCSTWKVTLDQG 541
>gb|CA031744.1|CA031744 HX11A03r HX Hordeum vulgare subsp. vulgare cDNA clone HX11A03
5-PRIME, mRNA sequence
Length = 648
Score = 287 bits (621), Expect = 9e-077
Identities = 111/143 (77%), Positives = 124/143 (86%)
Frame = +1 / +1
Query: 178 AVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGS 357
AV G ARATWYG PNGAGP DNGGACGFK+ N+YPFM+M SCGNQPLFKDGKGCG+
Sbjct: 220 AVSIGQSGVARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGA 399
Query: 358 CYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIID 537
CYKI+C K +CSGR ETV+ITDMNYYPV+ YHFDLSGTAFG+LAK G ND+LRH+GIID
Sbjct: 400 CYKIKCTKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIID 579
Query: 538 IEFTRVPCEFPGLKIGFHVEEYS 606
I+FTRV CEFPGLK+GFHVEE S
Sbjct: 580 IQFTRVACEFPGLKVGFHVEEGS 648
Score = 216 bits (466), Expect = 2e-055
Identities = 99/144 (68%), Positives = 103/144 (71%)
Frame = -2 / -2
Query: 599 SSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSV 420
SSTWNP PGNSH TLVN MSMMP RS SLRP LASLP AVPLRSKW TG**FMSV
Sbjct: 641 SSTWNPTFSPGNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**FMSV 462
Query: 419 MITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGP 240
+ITVS RPE F+H IL* P PLPSLN+GW PQE M M GY L P APPLS GP
Sbjct: 461 IITVSCRPEHALCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPPLS*GP 282
Query: 239 APLGWPYQVARAFCQGPQYTAASL 168
APLG PYQVARA P TA +L
Sbjct: 281 APLGAPYQVARATPDCPMDTAVAL 210
Score = 176 bits (378), Expect = 3e-043
Identities = 72/112 (64%), Positives = 84/112 (75%)
Frame = +3 / +3
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPVLLRADGDGDHHRHELLPG 443
+R+Q +PVP+H H LLR+PA VQGRQG+R +LQD V E +LRA GDGD H HELLPG
Sbjct: 306 LRVQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQGVLRAAGDGDDHGHELLPG 485
Query: 444 VQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVPWPQDRVPRGG 599
+PLRPQRH +RQA Q RPQR+AP HHRH VHQG VRVP + VPRGG
Sbjct: 486 GALPLRPQRHRLRQARQARPQRRAPTRRHHRHPVHQGGVRVPGAEGGVPRGG 641
Score = 79.0 bits (166), Expect(2) = 9e-027
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = -1 / -1
Query: 600 LLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
LLHVEP L+ RELARHPGELDVDDA V+ELVV AGLG+ AE AA
Sbjct: 642 LLHVEPHLQPRELARHPGELDVDDAGVSELVVAAGLGELAEGGAA 508
Score = 62.0 bits (129), Expect(2) = 9e-027
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -1 / -1
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
PPGA VL A +LVA AA+LAVLEQ LV+AG HGHE V V VLE
Sbjct: 444 PPGARLVLRALDLVACAAALAVLEQRLVAAGGHGHERVPVHVLE 313
>gb|BE454367.2|BE454367 HVSMEh0093N18f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0093N18f, mRNA sequence
Length = 870
Score = 214 bits (462), Expect(2) = 4e-076
Identities = 87/96 (90%), Positives = 91/96 (94%)
Frame = +1 / +1
Query: 412 VIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFH 591
VIITDMNYYPV+ YHFDLSGTAFGRLAK GLND+LRHSGIIDIEFTRVPCEFPGLKIGFH
Sbjct: 1 VIITDMNYYPVAPYHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPCEFPGLKIGFH 180
Query: 592 VEEYSSPVYFAVLVEYEDGDGDVVQVDLMESKTARG 699
VEEYS+PVYFAVLVEYEDGDGDVVQVDLMES+ G
Sbjct: 181 VEEYSNPVYFAVLVEYEDGDGDVVQVDLMESRGPGG 288
Score = 144 bits (309), Expect(2) = 2e-045
Identities = 66/95 (69%), Positives = 67/95 (70%)
Frame = -2 / -2
Query: 698 PRAVLDSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLVNSMSMMPEW 519
P DS+R TAK*TG EYSSTWNPIL PGNSHGT VNSMSMMPEW
Sbjct: 287 PPGPRDSMRSTCTTSPSPSSYSTSTAK*TGFEYSSTWNPILSPGNSHGTRVNSMSMMPEW 108
Query: 518 RSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMI 414
RSLSL P ASLPNAVPLRSKW TG**FMSVMI
Sbjct: 107 RSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMI 3
Score = 135 bits (290), Expect(2) = 1e-033
Identities = 54/65 (83%), Positives = 56/65 (86%)
Frame = +3 / +3
Query: 414 DHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVPWPQDRVPR 593
DHHRHELLPG +PLRPQRHGVRQA + R QRQAPPL HHRHRVH GAVRVP QDRVPR
Sbjct: 3 DHHRHELLPGGALPLRPQRHGVRQARKARAQRQAPPLRHHRHRVHTGAVRVPGAQDRVPR 182
Query: 594 GGVLE 608
GGVLE
Sbjct: 183 GGVLE 197
Score = 100 bits (214), Expect(2) = 7e-021
Identities = 45/53 (84%), Positives = 46/53 (86%)
Frame = -1 / -1
Query: 624 REVDGARVLLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
REVDG RVLLHVEPDLE RELARHP ELDVDDA VAE VVE GL +PAERRAA
Sbjct: 213 REVDGVRVLLHVEPDLEPRELARHPCELDVDDAGVAEPVVEPGLCEPAERRAA 55
Score = 91.8 bits (194), Expect(2) = 4e-076
Identities = 33/65 (50%), Positives = 44/65 (67%)
Frame = +1 / +1
Query: 691 ARGPPTGRWAPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVARNVIPANWRPNTFY 870
+RGP G+W MRESWGSVWR++ NHR+Q PF I++R++ G+TL +P WRP T
Sbjct: 271 SRGPGGGKWTRMRESWGSVWRLNCNHRLQAPFCIQVRDKCGETLGGSMGVPGRWRPGTLC 450
Query: 871 RSFVQ 885
R Q
Sbjct: 451 RCVEQ 465
Score = 59.3 bits (123), Expect(2) = 2e-045
Identities = 30/60 (50%), Positives = 31/60 (51%)
Frame = -2 / -2
Query: 872 R*KVLGLQLAGMTFLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGAQRPVGGPR 693
R KV GLQ G L SV P R M+ G C RWL RQTEP DS I P GPR
Sbjct: 452 RHKVPGLQRPGTPMLPPSVSPHLSRTWMQNGACSRWLQFRRQTEPHDSLILVHFPPPGPR 273
Score = 31.8 bits (63), Expect(2) = 1e-033
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3 / +3
Query: 804 RVRQDARRQERHPGQLEAQHLLPLLR 881
+VR+D R Q G LEA+HL+P+ R
Sbjct: 384 QVRRDTRGQHGGAGPLEARHLVPVRR 461
Score = 23.5 bits (45), Expect(2) = 7e-021
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3 / -3
Query: 886 TGRRSGRRCWASSWP 842
+ RR+G RC ASS P
Sbjct: 466 SARRTGTRCRASSGP 422
>gb|BF259343.2|BF259343 HVSMEf0019F11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019F11f, mRNA sequence
Length = 759
Score = 267 bits (577), Expect(2) = 5e-076
Identities = 103/136 (75%), Positives = 116/136 (85%)
Frame = +1 / +1
Query: 178 AVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGS 357
AV G ARATWYG PNGAGP DNGGACGFK+ N+YPFM+M SCGNQPLFKDGKGCG+
Sbjct: 280 AVSIGQSGVARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGA 459
Query: 358 CYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIID 537
CYKI+C K +CSGR ETV+ITDMNYYPV+ YH DLSGTAFG+LAK G ND+LRH+GIID
Sbjct: 460 CYKIKCTKHKACSGRQETVMITDMNYYPVAPYHLDLSGTAFGKLAKPGRNDELRHAGIID 639
Query: 538 IEFTRVPCEFPGLKIG 585
I+FTRV CEFPGL+ G
Sbjct: 640 IQFTRVACEFPGLESG 687
Score = 203 bits (437), Expect(2) = 5e-052
Identities = 94/139 (67%), Positives = 99/139 (71%)
Frame = -2 / -2
Query: 584 PILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMITVS 405
P+ PGNSH TLVN MSMMP RS SLRP LASLP AVPLRSKW TG**FMSV+ITVS
Sbjct: 686 PLSSPGNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**FMSVIITVS 507
Query: 404 VRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGW 225
RPE F+H IL* P PLPSLN+GW PQE M M GY L P APPLS GPAPLG
Sbjct: 506 CRPEHALCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPPLS*GPAPLGA 327
Query: 224 PYQVARAFCQGPQYTAASL 168
PYQVARA P TA +L
Sbjct: 326 PYQVARATPDCPMDTAVAL 270
Score = 158 bits (340), Expect(2) = 2e-040
Identities = 65/101 (64%), Positives = 76/101 (75%)
Frame = +3 / +3
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPVLLRADGDGDHHRHELLPG 443
+R+Q +PVP+H H LLR+PA VQGRQG+R +LQD V E +LRA GDGD H HELLPG
Sbjct: 366 LRVQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQGVLRAAGDGDDHGHELLPG 545
Query: 444 VQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRV 566
+PL PQRH +RQA Q RPQR+AP HHRH VHQG VRV
Sbjct: 546 GALPLGPQRHRLRQARQARPQRRAPTRRHHRHPVHQGGVRV 668
Score = 62.0 bits (129), Expect(2) = 3e-021
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -1 / -1
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
PPGA VL A +LVA AA+LAVLEQ LV+AG HGHE V V VLE
Sbjct: 504 PPGARLVLRALDLVACAAALAVLEQRLVAAGGHGHERVPVHVLE 373
Score = 60.2 bits (125), Expect(2) = 3e-021
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = -1 / -1
Query: 585 PDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
P + +LARHPGELDVDDA V+ELVV AGLG+ AE AA
Sbjct: 687 PTFKPGKLARHPGELDVDDAGVSELVVAAGLGELAEGGAA 568
Score = 38.6 bits (78), Expect(2) = 5e-076
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +1 / +3
Query: 577 KIGFHVEEYSSPVYFAVLVEYEDGDG 654
K G +EE S+ VY A+LVEYE+GDG
Sbjct: 681 KWGSTLEEGSNAVYMAILVEYENGDG 758
Score = 28.1 bits (55), Expect(2) = 2e-040
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / +2
Query: 565 FPGLKIGFHV 594
FPGLK+GFHV
Sbjct: 668 FPGLKVGFHV 697
Score = 22.6 bits (43), Expect(2) = 5e-052
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2 / -1
Query: 593 TWNPILRPG 567
TWNP +PG
Sbjct: 696 TWNPTFKPG 670
>gb|CA022237.1|CA022237 HZ42I19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42I19
5-PRIME, mRNA sequence
Length = 539
Score = 283 bits (613), Expect = 1e-075
Identities = 108/135 (80%), Positives = 115/135 (85%)
Frame = +1 / +1
Query: 169 SEAAVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKG 348
+ A Y W ARATWYG PNGAGPDDNGGACGFKH NQYPF SM SCGNQPLFKDGKG
Sbjct: 133 TSAVSYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGNQPLFKDGKG 312
Query: 349 CGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSG 528
CGSCY+IRC D SCSG ETV+ITDMNYYPV++YHFDLSGTAFG LAKSGLN+KLRHSG
Sbjct: 313 CGSCYQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSG 492
Query: 529 IIDIEFTRVPCEFPG 573
IIDI+F RVPC FPG
Sbjct: 493 IIDIQFRRVPCNFPG 537
Score = 230 bits (496), Expect = 2e-059
Identities = 96/124 (77%), Positives = 101/124 (81%)
Frame = -2 / -1
Query: 575 RPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRP 396
RPG HGTL+N MSMMPEWRS SLRPDLA P AVPLRSKWY TG**FMSV+ITVS+ P
Sbjct: 539 RPGKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITVSMLP 360
Query: 395 EQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQ 216
EQ+ S LHRI *QEP PLPSLN GW PQE M+ KGYW CLKP APPLSSGPAPLG PYQ
Sbjct: 359 EQERSPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFTCLKPQAPPLSSGPAPLGAPYQ 180
Query: 215 VARA 204
VA A
Sbjct: 179 VALA 168
Score = 173 bits (373), Expect = 1e-042
Identities = 74/127 (58%), Positives = 90/127 (70%)
Frame = +3 / +3
Query: 195 LAEGPGHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSV 374
+A G LV +RLQA +PVPL +H LLR+PA VQGRQG+RLLL D++
Sbjct: 159 VAPGQSDLVRSAQRRRARRQRRRLRLQAREPVPLLLHDLLRQPAPVQGRQGLRLLLPDTM 338
Query: 375 QEGPVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQG 554
Q P+LLR DGD HRHELLPG VPL P+RHG+R+ GQV PQR+APPLGHHRH V +G
Sbjct: 339 QRRPLLLRQHRDGDDHRHELLPGRPVPL*PERHGLRRPGQVGPQREAPPLGHHRHPVQEG 518
Query: 555 AVRVPWP 575
AV++P P
Sbjct: 519 AVQLPRP 539
Score = 64.8 bits (135), Expect(2) = 3e-023
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = -3 / -2
Query: 556 APW*TRCR*CPSGGACR*GRTWPACRTPCR*GRSGT 449
AP *T CR*CPSGGA R*G TWP R PCR G+SGT
Sbjct: 520 APS*TGCR*CPSGGASR*GPTWPGRRRPCRSGQSGT 413
Score = 64.3 bits (134), Expect(2) = 3e-023
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = -1 / -3
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V A LVAGAA+LAVLEQ LV+AG HG EGVLV VLE
Sbjct: 360 GAGAVAAASYLVAGAAALAVLEQGLVAAGGHGGEGVLVHVLE 235
>gb|BU980194.1|BU980194 HA18P06r HA Hordeum vulgare subsp. vulgare cDNA clone HA18P06
5-PRIME, mRNA sequence
Length = 495
Score = 283 bits (612), Expect = 2e-075
Identities = 109/141 (77%), Positives = 122/141 (86%)
Frame = +1 / +3
Query: 178 AVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGS 357
AV G ARATWYG PNGAGP DNGGACGFK+ N+YPFM+M SCGNQPLFKDGKGCG+
Sbjct: 69 AVSIGQSGVARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGA 248
Query: 358 CYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIID 537
CYKI+C K +CSGR ETV+ITDMNYYPV+ YHFDLSGTAFG+LAK G ND+LRH+GIID
Sbjct: 249 CYKIKCTKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIID 428
Query: 538 IEFTRVPCEFPGLKIGFHVEE 600
I+FTRV CEFP LK+GFHVEE
Sbjct: 429 IQFTRVACEFPELKVGFHVEE 491
Score = 212 bits (458), Expect = 3e-054
Identities = 98/144 (68%), Positives = 102/144 (70%)
Frame = -2 / -3
Query: 599 SSTWNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSV 420
SSTWNP GNSH TLVN MSMMP RS SLRP LASLP AVPLRSKW TG**FMSV
Sbjct: 490 SSTWNPTFSSGNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**FMSV 311
Query: 419 MITVSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGP 240
+ITVS RPE F+H IL* P PLPSLN+GW PQE M M GY L P APPLS GP
Sbjct: 310 IITVSCRPEHALCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPPLS*GP 131
Query: 239 APLGWPYQVARAFCQGPQYTAASL 168
APLG PYQVARA P TA +L
Sbjct: 130 APLGAPYQVARATPDCPMDTAVAL 59
Score = 176 bits (378), Expect = 3e-043
Identities = 72/112 (64%), Positives = 84/112 (75%)
Frame = +3 / +2
Query: 264 VRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPVLLRADGDGDHHRHELLPG 443
+R+Q +PVP+H H LLR+PA VQGRQG+R +LQD V E +LRA GDGD H HELLPG
Sbjct: 155 LRVQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQGVLRAAGDGDDHGHELLPG 334
Query: 444 VQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVPWPQDRVPRGG 599
+PLRPQRH +RQA Q RPQR+AP HHRH VHQG VRVP + VPRGG
Sbjct: 335 GALPLRPQRHRLRQARQARPQRRAPTRRHHRHPVHQGGVRVPGAEGGVPRGG 490
Score = 79.0 bits (166), Expect(2) = 9e-027
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = -1 / -2
Query: 600 LLHVEPDLEARELARHPGELDVDDARVAELVVEAGLGQPAERRAA 466
LLHVEP L+ RELARHPGELDVDDA V+ELVV AGLG+ AE AA
Sbjct: 491 LLHVEPHLQLRELARHPGELDVDDAGVSELVVAAGLGELAEGGAA 357
Score = 62.0 bits (129), Expect(2) = 9e-027
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -1 / -2
Query: 402 PPGAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
PPGA VL A +LVA AA+LAVLEQ LV+AG HGHE V V VLE
Sbjct: 293 PPGARLVLRALDLVACAAALAVLEQRLVAAGGHGHERVPVHVLE 162
>gb|BQ459628.1|BQ459628 HA08J01r HA Hordeum vulgare subsp. vulgare cDNA clone HA08J01
5-PRIME, mRNA sequence
Length = 470
Score = 145 bits (312), Expect(3) = 6e-075
Identities = 56/68 (82%), Positives = 61/68 (89%)
Frame = +1 / +1
Query: 691 ARGPPTGRWAPMRESWGSVWRMDTNHRMQPPFSIRIRNESGKTLVARNVIPANWRPNTFY 870
+RGP G+W MRESWGSVWR+D+NHR+Q PFSIRIRNESGKTLVA VIPANWRPNTFY
Sbjct: 220 SRGPGGGKWTRMRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPNTFY 399
Query: 871 RSFVQYS* 894
RSFVQYS*
Sbjct: 400 RSFVQYS* 423
Score = 114 bits (244), Expect(3) = 6e-075
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = +1 / +1
Query: 547 TRVPCEFPGLKIGFHVEEYSSPVYFAVLVEYEDGDGDVVQVDLMESKTARG 699
TRVPCEFPGLKIGFHVEEYS+PVYFAVLVEYEDGDGDVVQVDLMES+ G
Sbjct: 85 TRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESRGPGG 237
Score = 108 bits (230), Expect(3) = 3e-045
Identities = 50/66 (75%), Positives = 50/66 (75%)
Frame = -2 / -1
Query: 890 LYWTKER*KVLGLQLAGMTFLATSVLPDSLRMRMEKGGCMRWLVSMRQTEPQDSRIGAQR 711
LY TKER*KVLGLQLAGMT LATSVLPDSLRMRME G RWL S RQTEP DS I
Sbjct: 419 LYCTKER*KVLGLQLAGMTLLATSVLPDSLRMRMENGAWRRWLESRRQTEPHDSLILVHF 240
Query: 710 PVGGPR 693
P GPR
Sbjct: 239 PPPGPR 222
Score = 71.6 bits (150), Expect(3) = 3e-029
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -3 / -2
Query: 892 SCTGRRSGRRCWASSWPG*RSWRRASCRT 806
SCT RRSGRRCWASSWPG* WRRASCRT
Sbjct: 421 SCTARRSGRRCWASSWPG*PCWRRASCRT 335
Score = 66.6 bits (139), Expect(3) = 8e-028
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +3 / +3
Query: 804 RVRQDARRQERHPGQLEAQHLLPLLRPVQLAS 899
RVRQDARRQ+ HPGQLEAQHLLPLLR VQL S
Sbjct: 333 RVRQDARRQQGHPGQLEAQHLLPLLRAVQLKS 428
Score = 65.7 bits (137), Expect(2) = 6e-022
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -1 / -3
Query: 843 RDDVPGDERLAGLVADADGEGRLHAVVGVHAPD 745
RDD+ GDERLAGLVADADGE RL AVVGV APD
Sbjct: 372 RDDLVGDERLAGLVADADGEWRLEAVVGVEAPD 274
Score = 62.9 bits (131), Expect(3) = 3e-045
Identities = 28/51 (54%), Positives = 29/51 (56%)
Frame = -2 / -1
Query: 698 PRAVLDSIRXXXXXXXXXXXXXXXTAK*TGLEYSSTWNPILRPGNSHGTLV 546
P DS+R TAK*TG EYSSTWNPIL PGNSHGT V
Sbjct: 236 PPGPRDSMRSTCTTSPSPSSYSTSTAK*TGFEYSSTWNPILSPGNSHGTRV 84
Score = 61.6 bits (128), Expect(2) = 6e-022
Identities = 28/41 (68%), Positives = 28/41 (68%)
Frame = -2 / -3
Query: 584 PILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLR 462
P L P NSMSMMPEWRSLSL P ASLPNAVPLR
Sbjct: 123 PDLEPRELARHPCNSMSMMPEWRSLSLSPGFASLPNAVPLR 1
Score = 60.6 bits (126), Expect(3) = 6e-075
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1 / +2
Query: 463 LSGTAFGRLAKSGLNDKLRHSGIIDIE 543
LSGTAFGRLAK GLND+LRHSGIIDIE
Sbjct: 2 LSGTAFGRLAKPGLNDRLRHSGIIDIE 82
Score = 57.4 bits (119), Expect(3) = 3e-029
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -1 / -3
Query: 624 REVDGARVLLHVEPDLEARELARHP 550
REVDG RVLLHVEPDLE RELARHP
Sbjct: 162 REVDGVRVLLHVEPDLEPRELARHP 88
Score = 57.4 bits (119), Expect(3) = 8e-028
Identities = 22/28 (78%), Positives = 23/28 (82%)
Frame = +3 / +1
Query: 462 PQRHGVRQAGQVRPQRQAPPLGHHRHRV 545
PQRH VRQA + R QRQAPPL HHRHRV
Sbjct: 1 PQRHSVRQARKARAQRQAPPLRHHRHRV 84
Score = 50.1 bits (103), Expect(3) = 3e-045
Identities = 21/27 (77%), Positives = 21/27 (77%)
Frame = -3 / -1
Query: 544 TRCR*CPSGGACR*GRTWPACRTPCR* 464
TRCR*C SGGACR* R ACRT CR*
Sbjct: 83 TRCR*CRSGGACR*ARALRACRTLCR* 3
Score = 41.8 bits (85), Expect(3) = 3e-029
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = -1 / -2
Query: 543 LDVDDARVAELVVEAGLGQPAERRAA 466
LDVDDA VAE VVE GL +PAER AA
Sbjct: 82 LDVDDAGVAEPVVEPGLCEPAERCAA 5
Score = 41.8 bits (85), Expect(3) = 8e-028
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +3 / +3
Query: 546 HQGAVRVPWPQDRVPRGGVLE 608
+ GAVRVP QDRVPRGGVLE
Sbjct: 84 YTGAVRVPGAQDRVPRGGVLE 146
>gb|CA023986.1|CA023986 HZ48A15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48A15
5-PRIME, mRNA sequence
Length = 584
Score = 281 bits (607), Expect = 8e-075
Identities = 107/134 (79%), Positives = 114/134 (85%)
Frame = +1 / +2
Query: 169 SEAAVYWGPWQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKG 348
+ A Y W ARATWYG PNGAGPDDNGGACGFKH NQYPF SM SCGNQPLFKDGKG
Sbjct: 182 TSAVSYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGNQPLFKDGKG 361
Query: 349 CGSCYKIRCRKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSG 528
CGSCY+IRC D SCSG ETV+ITDMNYYPV++YHFDLSGTAFG LAKSGLN+KLRHSG
Sbjct: 362 CGSCYQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSG 541
Query: 529 IIDIEFTRVPCEFP 570
IIDI+F RVPC FP
Sbjct: 542 IIDIQFRRVPCNFP 583
Score = 224 bits (484), Expect = 7e-058
Identities = 94/122 (77%), Positives = 99/122 (81%)
Frame = -2 / -3
Query: 569 GNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVRPEQ 390
G HGTL+N MSMMPEWRS SLRPDLA P AVPLRSKWY TG**FMSV+ITVS+ PEQ
Sbjct: 582 GKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITVSMLPEQ 403
Query: 389 DGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPYQVA 210
+ S LHRI *QEP PLPSLN GW PQE M+ KGYW CLKP APPLSSGPAPLG PYQVA
Sbjct: 402 ERSPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFTCLKPQAPPLSSGPAPLGAPYQVA 223
Query: 209 RA 204
A
Sbjct: 222 LA 217
Score = 171 bits (369), Expect = 5e-042
Identities = 73/125 (58%), Positives = 89/125 (71%)
Frame = +3 / +1
Query: 195 LAEGPGHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSV 374
+A G LV +RLQA +PVPL +H LLR+PA VQGRQG+RLLL D++
Sbjct: 208 VAPGQSDLVRSAQRRRARRQRRRLRLQAREPVPLLLHDLLRQPAPVQGRQGLRLLLPDTM 387
Query: 375 QEGPVLLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQG 554
Q P+LLR DGD HRHELLPG VPL P+RHG+R+ GQV PQR+APPLGHHRH V +G
Sbjct: 388 QRRPLLLRQHRDGDDHRHELLPGRPVPL*PERHGLRRPGQVGPQREAPPLGHHRHPVQEG 567
Query: 555 AVRVP 569
AV++P
Sbjct: 568 AVQLP 582
Score = 64.8 bits (135), Expect(2) = 3e-023
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = -3 / -1
Query: 556 APW*TRCR*CPSGGACR*GRTWPACRTPCR*GRSGT 449
AP *T CR*CPSGGA R*G TWP R PCR G+SGT
Sbjct: 569 APS*TGCR*CPSGGASR*GPTWPGRRRPCRSGQSGT 462
Score = 64.3 bits (134), Expect(2) = 3e-023
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = -1 / -2
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V A LVAGAA+LAVLEQ LV+AG HG EGVLV VLE
Sbjct: 409 GAGAVAAASYLVAGAAALAVLEQGLVAAGGHGGEGVLVHVLE 284
>gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002M09f, mRNA sequence
Length = 754
Score = 275 bits (595), Expect(2) = 2e-074
Identities = 102/128 (79%), Positives = 114/128 (89%)
Frame = +1 / +3
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W+ ARATWYG P GAGP D+GGACGFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 192 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 371
Query: 376 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRV 555
D SCSG ETV+ITDMNYYPV+KYHFDLSGTAFG +AK GL++KLRHSGIIDI+F RV
Sbjct: 372 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 551
Query: 556 PCEFPGLK 579
PCEFPGLK
Sbjct: 552 PCEFPGLK 575
Score = 215 bits (464), Expect = 4e-055
Identities = 94/128 (73%), Positives = 99/128 (77%)
Frame = -2 / -1
Query: 578 LRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMITVSVR 399
L PGNSHGTL+N MSMMPE RS SLRP LA PNAVPLRSKWYL TG**FMSVM TVS
Sbjct: 574 LSPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGL 395
Query: 398 PEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPLGWPY 219
PEQD S +HRI *QEPHPLPSL G P + M+ KGYWLV L PHAPP S GPAP+G PY
Sbjct: 394 PEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPY 215
Query: 218 QVARAFCQ 195
QVA A Q
Sbjct: 214 QVALASSQ 191
Score = 187 bits (402), Expect = 1e-046
Identities = 77/127 (60%), Positives = 89/127 (70%)
Frame = +3 / +2
Query: 210 GHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPV 389
GHLV WCVR+Q HQPVPL +H ++R+ A +QG QGMRLLL D+V + PV
Sbjct: 206 GHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRPV 385
Query: 390 LLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVP 569
LLR GDG HHRHELLPG QVPLRP+ H VR+ GQ RPQR+AP L HHRH V + AVRVP
Sbjct: 386 LLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESAVRVP 565
Query: 570 WPQDRVP 590
W Q P
Sbjct: 566 WAQVTFP 586
Score = 66.6 bits (139), Expect(2) = 1e-021
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1 / -3
Query: 396 GAGRVLPAPNLVAGAASLAVLEQWLVSAGAHGHEGVLVGVLE 271
GAG V+ AP LVAGAASLA+LE LV+A HG EGVLVGVLE
Sbjct: 392 GAGLVVGAPYLVAGAASLAILEDGLVAARCHGGEGVLVGVLE 267
Score = 57.4 bits (119), Expect(2) = 1e-021
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = -1 / -3
Query: 579 LEARELARHPGELDVDDARVAELVVEAGLGQPAERRA 469
LE RELARH ELDVDDA V EL+ EAGLG AER A
Sbjct: 575 LEPRELARHSLELDVDDAGVPELLAEAGLGHGAERGA 465
Score = 25.4 bits (49), Expect(2) = 2e-074
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1 / +3
Query: 637 YEDGDGDVVQVDLMESKTARGPP 705
+ D DGDVV V +E+ + PP
Sbjct: 630 FHDRDGDVVPVGPIEANSVT*PP 698
>gb|BI957183.1|BI957183 HVSMEn0007P24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007P24f, mRNA sequence
Length = 844
Score = 270 bits (583), Expect(2) = 3e-074
Identities = 100/131 (76%), Positives = 113/131 (86%)
Frame = +1 / +1
Query: 196 WQKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMGSCGNQPLFKDGKGCGSCYKIRC 375
W+ ARATWYG P GAGP D+GGACGFK+TNQYPF SM SCGN+P+FKDGKGCGSCY+IRC
Sbjct: 193 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 372
Query: 376 RKDPSCSGRTETVIITDMNYYPVSKYHFDLSGTAFGRLAKSGLNDKLRHSGIIDIEFTRV 555
D SC ETV+ITDMNYYPV+KYHFDLSGTAFG +AK GL++KLRHSG+IDI F RV
Sbjct: 373 TNDQSCFRNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGLIDIPFKRV 552
Query: 556 PCEFPGLKIGF 588
PCEFPGLK+ F
Sbjct: 553 PCEFPGLKVTF 585
Score = 212 bits (458), Expect = 3e-054
Identities = 92/132 (69%), Positives = 99/132 (75%)
Frame = -2 / -3
Query: 590 WNPILRPGNSHGTLVNSMSMMPEWRSLSLRPDLASLPNAVPLRSKWYLDTG**FMSVMIT 411
W LRPGNSHGTL+N MS+ PE RS SLRP LA PNAVPLRSKWYL TG**FMSVM T
Sbjct: 587 WKVTLRPGNSHGTLLNGMSIKPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTT 408
Query: 410 VSVRPEQDGSFLHRIL*QEPHPLPSLNNGWFPQEPMDMKGYWLVCLKPHAPPLSSGPAPL 231
VS +QD S +HRI *QEPHPLPSL G P + M+ KGYWLV L PHAPP S GPAP+
Sbjct: 407 VSGLRKQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPV 228
Query: 230 GWPYQVARAFCQ 195
G PYQVA A Q
Sbjct: 227 GAPYQVALASSQ 192
Score = 177 bits (380), Expect = 2e-043
Identities = 73/127 (57%), Positives = 88/127 (69%)
Frame = +3 / +3
Query: 210 GHLVXXXXXXXXXXXXWCVRLQAHQPVPLHVHGLLRKPAIVQGRQGMRLLLQDSVQEGPV 389
GHLV WCVR+Q HQPVPL +H ++R+ A +QG QGMRLLL D+V + PV
Sbjct: 207 GHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTVHQRPV 386
Query: 390 LLRADGDGDHHRHELLPGVQVPLRPQRHGVRQAGQVRPQRQAPPLGHHRHRVHQGAVRVP 569
LL GDG HHRHELLPG QVPLRP+ H VR+ GQ RPQR+AP L +RH + + AVRVP
Sbjct: 387 LLPQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRLNRHSIQESAVRVP 566
Query: 570 WPQDRVP 590
W Q +P
Sbjct: 567 WSQGDLP 587
Score = 29.9 bits (59), Expect(2) = 3e-074
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1 / +3
Query: 634 EYEDGDGDVVQVDLMES 684
E +DG+ D+VQVDLME+
Sbjct: 627 EVQDGERDLVQVDLMEA 677
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 489,051,189
Number of Sequences: 312970
Number of extensions: 8357756
Number of successful extensions: 103891
Number of sequences better than 1.0e-020: 237
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 15755119913
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)