TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2418861.2.1
(614 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV932668.1|AV932668 AV932668 K. Sato unpublished cDNA li... 306 6e-083
gb|AV932909.1|AV932909 AV932909 K. Sato unpublished cDNA li... 306 6e-083
gb|BJ472039.1|BJ472039 BJ472039 K. Sato unpublished cDNA li... 306 6e-083
gb|CA028274.1|CA028274 HZ61I02r HZ Hordeum vulgare subsp. v... 306 6e-083
gb|CK122610.1|CK122610 BES1824104j23 BES1824 Hordeum vulgar... 302 1e-081
gb|AL507698.1|AL507698 AL507698 Hordeum vulgare Barke devel... 267 2e-078
gb|BG300712.2|BG300712 HVSMEb0018B21f Hordeum vulgare seedl... 291 3e-078
gb|AV932284.1|AV932284 AV932284 K. Sato unpublished cDNA li... 264 3e-070
gb|BU984788.1|BU984788 HF05A10r HF Hordeum vulgare subsp. v... 261 2e-069
gb|CA012169.1|CA012169 HT04K11r HT Hordeum vulgare subsp. v... 261 2e-069
gb|AV917169.1|AV917169 AV917169 K. Sato unpublished cDNA li... 197 4e-065
gb|BE215659.3|BE215659 HV_CEb0007L14f Hordeum vulgare seedl... 238 2e-062
gb|BU990099.1|BU990099 HF24B10r HF Hordeum vulgare subsp. v... 205 2e-052
gb|BQ468511.1|BQ468511 HM01H13T HM Hordeum vulgare subsp. v... 177 4e-044
gb|BF257939.2|BF257939 HVSMEf0014E17f Hordeum vulgare seedl... 144 3e-034
gb|BQ756038.1|BQ756038 EBem05_SQ001_G05_R embryo, 14 DPA, n... 142 2e-033
gb|BQ472834.1|BQ472834 HB01F10r BC Hordeum vulgare subsp. v... 131 3e-030
gb|BF266844.2|BF266844 HV_CEa0016D13f Hordeum vulgare seedl... 127 5e-029
gb|CA021300.1|CA021300 HZ39L04r HZ Hordeum vulgare subsp. v... 127 7e-029
gb|BE602586.2|BE602586 HVSMEh0100C21f Hordeum vulgare 5-45 ... 122 1e-027
gb|CA023543.1|CA023543 HZ46J08r HZ Hordeum vulgare subsp. v... 117 4e-026
gb|BQ757070.1|BQ757070 EBem10_SQ002_L08_R embryo, 2 Day ger... 117 6e-026
gb|BF259042.2|BF259042 HVSMEf0017H19f Hordeum vulgare seedl... 115 3e-025
gb|CA028533.1|CA028533 HZ62F08r HZ Hordeum vulgare subsp. v... 113 1e-024
gb|BU975772.1|BU975772 HB32E04r BC Hordeum vulgare subsp. v... 101 4e-021
>gb|AV932668.1|AV932668 AV932668 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal1j14 5', mRNA sequence
Length = 580
Score = 306 bits (663), Expect = 6e-083
Identities = 122/130 (93%), Positives = 126/130 (96%)
Frame = +3 / +2
Query: 225 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 404
+RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW+GESLRESIKRHEHFLALQL LKPG
Sbjct: 65 SRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWSGESLRESIKRHEHFLALQLELKPG 244
Query: 405 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMK 584
MKVLDVGCGIGGPLREIARFSSTSVTGLNNN+YQITRGKELNR G+SGTCDFVKADFMK
Sbjct: 245 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNDYQITRGKELNRSVGLSGTCDFVKADFMK 424
Query: 585 MPFDDNTFDA 614
MPF DNTFDA
Sbjct: 425 MPFSDNTFDA 454
Score = 267 bits (577), Expect = 4e-071
Identities = 117/129 (90%), Positives = 119/129 (92%)
Frame = -2 / -2
Query: 613 ASKVLSSNGIFMKSALTKSHVPLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPP 434
ASKVLS NGIFMKSALTKS VPL P RLSSFPLVIW SLLFNPVTEVELNLAISL+GPP
Sbjct: 453 ASKVLSENGIFMKSALTKSQVPLSPTDRLSSFPLVIW*SLLFNPVTEVELNLAISLNGPP 274
Query: 433 IPQPTSKTFIPGFKPSCRARKCSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLL 254
IPQPTSKTFIPGF SCRARKCSCRL+LS KDSP HL*AKWKDSPQPYS*KLVARS*YLL
Sbjct: 273 IPQPTSKTFIPGFNSSCRARKCSCRLILSLKDSPLHL*AKWKDSPQPYS*KLVARS*YLL 94
Query: 253 TISV*LDFL 227
TISV*LDFL
Sbjct: 93 TISV*LDFL 67
Score = 219 bits (473), Expect = 1e-056
Identities = 99/145 (68%), Positives = 108/145 (74%)
Frame = -3 / -3
Query: 612 HQKCCHRTASS*SPP*QNHMFH*FLLNG*APFPWLSGIRCYSIR*LKLS*ILQFLSVVHL 433
HQKC R ASS*S P*QNH FH* L *APFP LSG RC SI+*L+ S*I QFL L
Sbjct: 452 HQKCYQRMASS*SLP*QNHKFH*VLQTD*APFP*LSGSRCCSIQ*LRWS*ISQFLLTARL 273
Query: 432 FHSPHLKPSFLVSNQVAGQENAHVA*CFHVRILHSICEQSGRIHPNHTHRS*WQDHSIY* 253
FHS H KPS LVS Q G E+A * F ++ILHS CEQSGRIHP+HT RS* QDHSIY*
Sbjct: 272 FHSRHPKPSSLVSTQAVGPESARAV*YFPLKILHSTCEQSGRIHPSHTRRS**QDHSIY* 93
Query: 252 PYQYSWTSLLPPSLHSIHDISHTHR 178
PY+ SW S +PPSLH+IHDISHT R
Sbjct: 92 PYRCSWISSIPPSLHNIHDISHTRR 18
Score = 215 bits (464), Expect = 2e-055
Identities = 100/146 (68%), Positives = 111/146 (76%)
Frame = -1 / -1
Query: 614 SIKSVVIERHLHEVRLDKITCSTNSC*TVELLSPGYLVFVVIQSGN*S*AKSCNFSQWST 435
SIKSV+ E HLHEV LDKIT ST S ++LLSP YLV VV+QS N* AKS NFS
Sbjct: 454 SIKSVIREWHLHEVCLDKITSSTKSYRPIKLLSPSYLVVVVVQSSN*GGAKSRNFS*RPA 275
Query: 434 YSTAHI*NLHSWFQTKLQGKKMLMSLDAFT*GFSIPSVSKVEGFTPTILIEASGKIIVFI 255
YSTA I NLH WFQ KL G+K+L+ D F * FS P VSKVEGFTP IL+EAS KIIVFI
Sbjct: 274 YSTADIQNLHPWFQLKL*GQKVLVPFDTFP*RFSTPPVSKVEGFTPAILVEASSKIIVFI 95
Query: 254 NHISIVGLPCFLLPSIVSMIFLILID 177
NHI +VG P FLLPSI+SMIFLIL+D
Sbjct: 94 NHIGVVGFPRFLLPSIISMIFLILVD 17
Score = 140 bits (300), Expect(2) = 5e-045
Identities = 61/99 (61%), Positives = 70/99 (70%)
Frame = +2 / +1
Query: 317 CSQMEWRILT*KHQAT*AFSCPATWFETRNEGFRCGLWNRWTTERNCKI*LNFSYRIE*Q 496
CSQ+EWRI K+Q A S P ETR+EGF C LWNR +RNC+I*L+ SY IE Q
Sbjct: 157 CSQVEWRIFKGKYQTARALSGPTA*VETRDEGFGCRLWNRRAVKRNCEI*LHLSYWIEQQ 336
Query: 497 RIPDNQGKGAQPFSRN*WNM*FCQGGLHEDAVR*QHF*C 613
R+PDN GKGA R *WN+*FCQG LHEDA+ * HF*C
Sbjct: 337 RLPDN*GKGA*SVCRT*WNL*FCQGRLHEDAIL**HF*C 453
Score = 139 bits (299), Expect = 1e-032
Identities = 78/128 (60%), Positives = 84/128 (65%)
Frame = +1 / +3
Query: 178 SMSMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKAS 357
S SMRNIMD MEGRR +G+PT IWLINTMIL LAS SM GVNPSTLLT G+EN K S
Sbjct: 18 STSMRNIMDIMEGRRNRGNPTTPIWLINTMILLLASTSMAGVNPSTLLTGGVENL*GKVS 197
Query: 358 SDMSIFLPCNLV*NQE*RF*MWAVE*VDH*EKXXXXXXXXXPD*ITTNTR*PGERSSTV* 537
+ S F P +L *NQ *RF M AVE* *EK D* TT TR* GERS
Sbjct: 198 NGTSTFWPYSLS*NQG*RFWMSAVE*AGR*EKLRDLAPPQLLD*TTTTTR*LGERSLIGL 377
Query: 538 QELVEHVI 561
+LVE VI
Sbjct: 378 *DLVELVI 401
Score = 60.6 bits (126), Expect(2) = 5e-045
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +2 / +1
Query: 161 TGHLIRR*V*EISWILWREGGSKEVQLY*YG**IL*SCH* 280
T + R V*EISWILWREGG +E+QL+ YG**IL*SC+*
Sbjct: 1 TSQIGGRRV*EISWILWREGGIEEIQLHRYG**IL*SCY* 120
>gb|AV932909.1|AV932909 AV932909 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal4j24 5', mRNA sequence
Length = 677
Score = 306 bits (663), Expect = 6e-083
Identities = 122/130 (93%), Positives = 126/130 (96%)
Frame = +3 / +3
Query: 225 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 404
+RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW+GESLRESIKRHEHFLALQL LKPG
Sbjct: 144 SRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWSGESLRESIKRHEHFLALQLELKPG 323
Query: 405 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMK 584
MKVLDVGCGIGGPLREIARFSSTSVTGLNNN+YQITRGKELNR G+SGTCDFVKADFMK
Sbjct: 324 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNDYQITRGKELNRSVGLSGTCDFVKADFMK 503
Query: 585 MPFDDNTFDA 614
MPF DNTFDA
Sbjct: 504 MPFSDNTFDA 533
Score = 267 bits (577), Expect = 4e-071
Identities = 117/129 (90%), Positives = 119/129 (92%)
Frame = -2 / -2
Query: 613 ASKVLSSNGIFMKSALTKSHVPLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPP 434
ASKVLS NGIFMKSALTKS VPL P RLSSFPLVIW SLLFNPVTEVELNLAISL+GPP
Sbjct: 532 ASKVLSENGIFMKSALTKSQVPLSPTDRLSSFPLVIW*SLLFNPVTEVELNLAISLNGPP 353
Query: 433 IPQPTSKTFIPGFKPSCRARKCSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLL 254
IPQPTSKTFIPGF SCRARKCSCRL+LS KDSP HL*AKWKDSPQPYS*KLVARS*YLL
Sbjct: 352 IPQPTSKTFIPGFNSSCRARKCSCRLILSLKDSPLHL*AKWKDSPQPYS*KLVARS*YLL 173
Query: 253 TISV*LDFL 227
TISV*LDFL
Sbjct: 172 TISV*LDFL 146
Score = 219 bits (473), Expect = 1e-056
Identities = 99/145 (68%), Positives = 108/145 (74%)
Frame = -3 / -3
Query: 612 HQKCCHRTASS*SPP*QNHMFH*FLLNG*APFPWLSGIRCYSIR*LKLS*ILQFLSVVHL 433
HQKC R ASS*S P*QNH FH* L *APFP LSG RC SI+*L+ S*I QFL L
Sbjct: 531 HQKCYQRMASS*SLP*QNHKFH*VLQTD*APFP*LSGSRCCSIQ*LRWS*ISQFLLTARL 352
Query: 432 FHSPHLKPSFLVSNQVAGQENAHVA*CFHVRILHSICEQSGRIHPNHTHRS*WQDHSIY* 253
FHS H KPS LVS Q G E+A * F ++ILHS CEQSGRIHP+HT RS* QDHSIY*
Sbjct: 351 FHSRHPKPSSLVSTQAVGPESARAV*YFPLKILHSTCEQSGRIHPSHTRRS**QDHSIY* 172
Query: 252 PYQYSWTSLLPPSLHSIHDISHTHR 178
PY+ SW S +PPSLH+IHDISHT R
Sbjct: 171 PYRCSWISSIPPSLHNIHDISHTRR 97
Score = 215 bits (464), Expect = 2e-055
Identities = 100/146 (68%), Positives = 111/146 (76%)
Frame = -1 / -1
Query: 614 SIKSVVIERHLHEVRLDKITCSTNSC*TVELLSPGYLVFVVIQSGN*S*AKSCNFSQWST 435
SIKSV+ E HLHEV LDKIT ST S ++LLSP YLV VV+QS N* AKS NFS
Sbjct: 533 SIKSVIREWHLHEVCLDKITSSTKSYRPIKLLSPSYLVVVVVQSSN*GGAKSRNFS*RPA 354
Query: 434 YSTAHI*NLHSWFQTKLQGKKMLMSLDAFT*GFSIPSVSKVEGFTPTILIEASGKIIVFI 255
YSTA I NLH WFQ KL G+K+L+ D F * FS P VSKVEGFTP IL+EAS KIIVFI
Sbjct: 353 YSTADIQNLHPWFQLKL*GQKVLVPFDTFP*RFSTPPVSKVEGFTPAILVEASSKIIVFI 174
Query: 254 NHISIVGLPCFLLPSIVSMIFLILID 177
NHI +VG P FLLPSI+SMIFLIL+D
Sbjct: 173 NHIGVVGFPRFLLPSIISMIFLILVD 96
Score = 140 bits (300), Expect(2) = 5e-045
Identities = 61/99 (61%), Positives = 70/99 (70%)
Frame = +2 / +2
Query: 317 CSQMEWRILT*KHQAT*AFSCPATWFETRNEGFRCGLWNRWTTERNCKI*LNFSYRIE*Q 496
CSQ+EWRI K+Q A S P ETR+EGF C LWNR +RNC+I*L+ SY IE Q
Sbjct: 236 CSQVEWRIFKGKYQTARALSGPTA*VETRDEGFGCRLWNRRAVKRNCEI*LHLSYWIEQQ 415
Query: 497 RIPDNQGKGAQPFSRN*WNM*FCQGGLHEDAVR*QHF*C 613
R+PDN GKGA R *WN+*FCQG LHEDA+ * HF*C
Sbjct: 416 RLPDN*GKGA*SVCRT*WNL*FCQGRLHEDAIL**HF*C 532
Score = 139 bits (299), Expect = 1e-032
Identities = 78/128 (60%), Positives = 84/128 (65%)
Frame = +1 / +1
Query: 178 SMSMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKAS 357
S SMRNIMD MEGRR +G+PT IWLINTMIL LAS SM GVNPSTLLT G+EN K S
Sbjct: 97 STSMRNIMDIMEGRRNRGNPTTPIWLINTMILLLASTSMAGVNPSTLLTGGVENL*GKVS 276
Query: 358 SDMSIFLPCNLV*NQE*RF*MWAVE*VDH*EKXXXXXXXXXPD*ITTNTR*PGERSSTV* 537
+ S F P +L *NQ *RF M AVE* *EK D* TT TR* GERS
Sbjct: 277 NGTSTFWPYSLS*NQG*RFWMSAVE*AGR*EKLRDLAPPQLLD*TTTTTR*LGERSLIGL 456
Query: 538 QELVEHVI 561
+LVE VI
Sbjct: 457 *DLVELVI 480
Score = 60.6 bits (126), Expect(2) = 5e-045
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +2 / +2
Query: 161 TGHLIRR*V*EISWILWREGGSKEVQLY*YG**IL*SCH* 280
T + R V*EISWILWREGG +E+QL+ YG**IL*SC+*
Sbjct: 80 TSQIGGRRV*EISWILWREGGIEEIQLHRYG**IL*SCY* 199
>gb|BJ472039.1|BJ472039 BJ472039 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal31k11 5', mRNA sequence
Length = 628
Score = 306 bits (663), Expect = 6e-083
Identities = 122/130 (93%), Positives = 126/130 (96%)
Frame = +3 / +1
Query: 225 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 404
+RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW+GESLRESIKRHEHFLALQL LKPG
Sbjct: 118 SRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWSGESLRESIKRHEHFLALQLELKPG 297
Query: 405 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMK 584
MKVLDVGCGIGGPLREIARFSSTSVTGLNNN+YQITRGKELNR G+SGTCDFVKADFMK
Sbjct: 298 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNDYQITRGKELNRSVGLSGTCDFVKADFMK 477
Query: 585 MPFDDNTFDA 614
MPF DNTFDA
Sbjct: 478 MPFSDNTFDA 507
Score = 267 bits (577), Expect = 4e-071
Identities = 117/129 (90%), Positives = 119/129 (92%)
Frame = -2 / -3
Query: 613 ASKVLSSNGIFMKSALTKSHVPLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPP 434
ASKVLS NGIFMKSALTKS VPL P RLSSFPLVIW SLLFNPVTEVELNLAISL+GPP
Sbjct: 506 ASKVLSENGIFMKSALTKSQVPLSPTDRLSSFPLVIW*SLLFNPVTEVELNLAISLNGPP 327
Query: 433 IPQPTSKTFIPGFKPSCRARKCSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLL 254
IPQPTSKTFIPGF SCRARKCSCRL+LS KDSP HL*AKWKDSPQPYS*KLVARS*YLL
Sbjct: 326 IPQPTSKTFIPGFNSSCRARKCSCRLILSLKDSPLHL*AKWKDSPQPYS*KLVARS*YLL 147
Query: 253 TISV*LDFL 227
TISV*LDFL
Sbjct: 146 TISV*LDFL 120
Score = 219 bits (473), Expect = 1e-056
Identities = 99/145 (68%), Positives = 108/145 (74%)
Frame = -3 / -1
Query: 612 HQKCCHRTASS*SPP*QNHMFH*FLLNG*APFPWLSGIRCYSIR*LKLS*ILQFLSVVHL 433
HQKC R ASS*S P*QNH FH* L *APFP LSG RC SI+*L+ S*I QFL L
Sbjct: 505 HQKCYQRMASS*SLP*QNHKFH*VLQTD*APFP*LSGSRCCSIQ*LRWS*ISQFLLTARL 326
Query: 432 FHSPHLKPSFLVSNQVAGQENAHVA*CFHVRILHSICEQSGRIHPNHTHRS*WQDHSIY* 253
FHS H KPS LVS Q G E+A * F ++ILHS CEQSGRIHP+HT RS* QDHSIY*
Sbjct: 325 FHSRHPKPSSLVSTQAVGPESARAV*YFPLKILHSTCEQSGRIHPSHTRRS**QDHSIY* 146
Query: 252 PYQYSWTSLLPPSLHSIHDISHTHR 178
PY+ SW S +PPSLH+IHDISHT R
Sbjct: 145 PYRCSWISSIPPSLHNIHDISHTRR 71
Score = 215 bits (464), Expect = 2e-055
Identities = 100/146 (68%), Positives = 111/146 (76%)
Frame = -1 / -2
Query: 614 SIKSVVIERHLHEVRLDKITCSTNSC*TVELLSPGYLVFVVIQSGN*S*AKSCNFSQWST 435
SIKSV+ E HLHEV LDKIT ST S ++LLSP YLV VV+QS N* AKS NFS
Sbjct: 507 SIKSVIREWHLHEVCLDKITSSTKSYRPIKLLSPSYLVVVVVQSSN*GGAKSRNFS*RPA 328
Query: 434 YSTAHI*NLHSWFQTKLQGKKMLMSLDAFT*GFSIPSVSKVEGFTPTILIEASGKIIVFI 255
YSTA I NLH WFQ KL G+K+L+ D F * FS P VSKVEGFTP IL+EAS KIIVFI
Sbjct: 327 YSTADIQNLHPWFQLKL*GQKVLVPFDTFP*RFSTPPVSKVEGFTPAILVEASSKIIVFI 148
Query: 254 NHISIVGLPCFLLPSIVSMIFLILID 177
NHI +VG P FLLPSI+SMIFLIL+D
Sbjct: 147 NHIGVVGFPRFLLPSIISMIFLILVD 70
Score = 140 bits (300), Expect(2) = 5e-045
Identities = 61/99 (61%), Positives = 70/99 (70%)
Frame = +2 / +3
Query: 317 CSQMEWRILT*KHQAT*AFSCPATWFETRNEGFRCGLWNRWTTERNCKI*LNFSYRIE*Q 496
CSQ+EWRI K+Q A S P ETR+EGF C LWNR +RNC+I*L+ SY IE Q
Sbjct: 210 CSQVEWRIFKGKYQTARALSGPTA*VETRDEGFGCRLWNRRAVKRNCEI*LHLSYWIEQQ 389
Query: 497 RIPDNQGKGAQPFSRN*WNM*FCQGGLHEDAVR*QHF*C 613
R+PDN GKGA R *WN+*FCQG LHEDA+ * HF*C
Sbjct: 390 RLPDN*GKGA*SVCRT*WNL*FCQGRLHEDAIL**HF*C 506
Score = 139 bits (299), Expect = 1e-032
Identities = 78/128 (60%), Positives = 84/128 (65%)
Frame = +1 / +2
Query: 178 SMSMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKAS 357
S SMRNIMD MEGRR +G+PT IWLINTMIL LAS SM GVNPSTLLT G+EN K S
Sbjct: 71 STSMRNIMDIMEGRRNRGNPTTPIWLINTMILLLASTSMAGVNPSTLLTGGVENL*GKVS 250
Query: 358 SDMSIFLPCNLV*NQE*RF*MWAVE*VDH*EKXXXXXXXXXPD*ITTNTR*PGERSSTV* 537
+ S F P +L *NQ *RF M AVE* *EK D* TT TR* GERS
Sbjct: 251 NGTSTFWPYSLS*NQG*RFWMSAVE*AGR*EKLRDLAPPQLLD*TTTTTR*LGERSLIGL 430
Query: 538 QELVEHVI 561
+LVE VI
Sbjct: 431 *DLVELVI 454
Score = 60.6 bits (126), Expect(2) = 5e-045
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +2 / +3
Query: 161 TGHLIRR*V*EISWILWREGGSKEVQLY*YG**IL*SCH* 280
T + R V*EISWILWREGG +E+QL+ YG**IL*SC+*
Sbjct: 54 TSQIGGRRV*EISWILWREGGIEEIQLHRYG**IL*SCY* 173
>gb|CA028274.1|CA028274 HZ61I02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61I02
5-PRIME, mRNA sequence
Length = 678
Score = 306 bits (663), Expect = 6e-083
Identities = 122/130 (93%), Positives = 126/130 (96%)
Frame = +3 / +1
Query: 225 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 404
+RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW+GESLRESIKRHEHFLALQL LKPG
Sbjct: 244 SRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWSGESLRESIKRHEHFLALQLELKPG 423
Query: 405 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMK 584
MKVLDVGCGIGGPLREIARFSSTSVTGLNNN+YQITRGKELNR G+SGTCDFVKADFMK
Sbjct: 424 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNDYQITRGKELNRSVGLSGTCDFVKADFMK 603
Query: 585 MPFDDNTFDA 614
MPF DNTFDA
Sbjct: 604 MPFSDNTFDA 633
Score = 267 bits (577), Expect = 4e-071
Identities = 117/129 (90%), Positives = 119/129 (92%)
Frame = -2 / -2
Query: 613 ASKVLSSNGIFMKSALTKSHVPLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPP 434
ASKVLS NGIFMKSALTKS VPL P RLSSFPLVIW SLLFNPVTEVELNLAISL+GPP
Sbjct: 632 ASKVLSENGIFMKSALTKSQVPLSPTDRLSSFPLVIW*SLLFNPVTEVELNLAISLNGPP 453
Query: 433 IPQPTSKTFIPGFKPSCRARKCSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLL 254
IPQPTSKTFIPGF SCRARKCSCRL+LS KDSP HL*AKWKDSPQPYS*KLVARS*YLL
Sbjct: 452 IPQPTSKTFIPGFNSSCRARKCSCRLILSLKDSPLHL*AKWKDSPQPYS*KLVARS*YLL 273
Query: 253 TISV*LDFL 227
TISV*LDFL
Sbjct: 272 TISV*LDFL 246
Score = 219 bits (473), Expect = 1e-056
Identities = 99/145 (68%), Positives = 108/145 (74%)
Frame = -3 / -3
Query: 612 HQKCCHRTASS*SPP*QNHMFH*FLLNG*APFPWLSGIRCYSIR*LKLS*ILQFLSVVHL 433
HQKC R ASS*S P*QNH FH* L *APFP LSG RC SI+*L+ S*I QFL L
Sbjct: 631 HQKCYQRMASS*SLP*QNHKFH*VLQTD*APFP*LSGSRCCSIQ*LRWS*ISQFLLTARL 452
Query: 432 FHSPHLKPSFLVSNQVAGQENAHVA*CFHVRILHSICEQSGRIHPNHTHRS*WQDHSIY* 253
FHS H KPS LVS Q G E+A * F ++ILHS CEQSGRIHP+HT RS* QDHSIY*
Sbjct: 451 FHSRHPKPSSLVSTQAVGPESARAV*YFPLKILHSTCEQSGRIHPSHTRRS**QDHSIY* 272
Query: 252 PYQYSWTSLLPPSLHSIHDISHTHR 178
PY+ SW S +PPSLH+IHDISHT R
Sbjct: 271 PYRCSWISSIPPSLHNIHDISHTRR 197
Score = 215 bits (464), Expect = 2e-055
Identities = 100/146 (68%), Positives = 111/146 (76%)
Frame = -1 / -1
Query: 614 SIKSVVIERHLHEVRLDKITCSTNSC*TVELLSPGYLVFVVIQSGN*S*AKSCNFSQWST 435
SIKSV+ E HLHEV LDKIT ST S ++LLSP YLV VV+QS N* AKS NFS
Sbjct: 633 SIKSVIREWHLHEVCLDKITSSTKSYRPIKLLSPSYLVVVVVQSSN*GGAKSRNFS*RPA 454
Query: 434 YSTAHI*NLHSWFQTKLQGKKMLMSLDAFT*GFSIPSVSKVEGFTPTILIEASGKIIVFI 255
YSTA I NLH WFQ KL G+K+L+ D F * FS P VSKVEGFTP IL+EAS KIIVFI
Sbjct: 453 YSTADIQNLHPWFQLKL*GQKVLVPFDTFP*RFSTPPVSKVEGFTPAILVEASSKIIVFI 274
Query: 254 NHISIVGLPCFLLPSIVSMIFLILID 177
NHI +VG P FLLPSI+SMIFLIL+D
Sbjct: 273 NHIGVVGFPRFLLPSIISMIFLILVD 196
Score = 140 bits (300), Expect(2) = 5e-045
Identities = 61/99 (61%), Positives = 70/99 (70%)
Frame = +2 / +3
Query: 317 CSQMEWRILT*KHQAT*AFSCPATWFETRNEGFRCGLWNRWTTERNCKI*LNFSYRIE*Q 496
CSQ+EWRI K+Q A S P ETR+EGF C LWNR +RNC+I*L+ SY IE Q
Sbjct: 336 CSQVEWRIFKGKYQTARALSGPTA*VETRDEGFGCRLWNRRAVKRNCEI*LHLSYWIEQQ 515
Query: 497 RIPDNQGKGAQPFSRN*WNM*FCQGGLHEDAVR*QHF*C 613
R+PDN GKGA R *WN+*FCQG LHEDA+ * HF*C
Sbjct: 516 RLPDN*GKGA*SVCRT*WNL*FCQGRLHEDAIL**HF*C 632
Score = 139 bits (299), Expect = 1e-032
Identities = 78/128 (60%), Positives = 84/128 (65%)
Frame = +1 / +2
Query: 178 SMSMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKAS 357
S SMRNIMD MEGRR +G+PT IWLINTMIL LAS SM GVNPSTLLT G+EN K S
Sbjct: 197 STSMRNIMDIMEGRRNRGNPTTPIWLINTMILLLASTSMAGVNPSTLLTGGVENL*GKVS 376
Query: 358 SDMSIFLPCNLV*NQE*RF*MWAVE*VDH*EKXXXXXXXXXPD*ITTNTR*PGERSSTV* 537
+ S F P +L *NQ *RF M AVE* *EK D* TT TR* GERS
Sbjct: 377 NGTSTFWPYSLS*NQG*RFWMSAVE*AGR*EKLRDLAPPQLLD*TTTTTR*LGERSLIGL 556
Query: 538 QELVEHVI 561
+LVE VI
Sbjct: 557 *DLVELVI 580
Score = 60.6 bits (126), Expect(2) = 5e-045
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +2 / +3
Query: 161 TGHLIRR*V*EISWILWREGGSKEVQLY*YG**IL*SCH* 280
T + R V*EISWILWREGG +E+QL+ YG**IL*SC+*
Sbjct: 180 TSQIGGRRV*EISWILWREGGIEEIQLHRYG**IL*SCY* 299
>gb|CK122610.1|CK122610 BES1824104j23 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010J234 5-PRIME, mRNA sequence
Length = 730
Score = 302 bits (653), Expect = 1e-081
Identities = 120/128 (93%), Positives = 124/128 (96%)
Frame = +3 / +1
Query: 225 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 404
+RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW+GESLRESIKRHEHFLALQL LKPG
Sbjct: 241 SRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWSGESLRESIKRHEHFLALQLELKPG 420
Query: 405 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMK 584
MKVLDVGCGIGGPLREIARFSSTSVTGLNNN+YQITRGKELNR G+SGTCDFVKADFMK
Sbjct: 421 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNDYQITRGKELNRSVGLSGTCDFVKADFMK 600
Query: 585 MPFDDNTF 608
MPF DNTF
Sbjct: 601 MPFSDNTF 624
Score = 263 bits (569), Expect = 6e-070
Identities = 115/127 (90%), Positives = 117/127 (92%)
Frame = -2 / -3
Query: 607 KVLSSNGIFMKSALTKSHVPLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPPIP 428
KVLS NGIFMKSALTKS VPL P RLSSFPLVIW SLLFNPVTEVELNLAISL+GPPIP
Sbjct: 623 KVLSENGIFMKSALTKSQVPLSPTDRLSSFPLVIW*SLLFNPVTEVELNLAISLNGPPIP 444
Query: 427 QPTSKTFIPGFKPSCRARKCSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLLTI 248
QPTSKTFIPGF SCRARKCSCRL+LS KDSP HL*AKWKDSPQPYS*KLVARS*YLLTI
Sbjct: 443 QPTSKTFIPGFNSSCRARKCSCRLILSLKDSPLHL*AKWKDSPQPYS*KLVARS*YLLTI 264
Query: 247 SV*LDFL 227
SV*LDFL
Sbjct: 263 SV*LDFL 243
Score = 214 bits (461), Expect = 4e-055
Identities = 97/144 (67%), Positives = 107/144 (74%)
Frame = -3 / -1
Query: 609 QKCCHRTASS*SPP*QNHMFH*FLLNG*APFPWLSGIRCYSIR*LKLS*ILQFLSVVHLF 430
+KC R ASS*S P*QNH FH* L *APFP LSG RC SI+*L+ S*I QFL LF
Sbjct: 625 KKCYQRMASS*SLP*QNHKFH*VLQTD*APFP*LSGSRCCSIQ*LRWS*ISQFLLTARLF 446
Query: 429 HSPHLKPSFLVSNQVAGQENAHVA*CFHVRILHSICEQSGRIHPNHTHRS*WQDHSIY*P 250
HS H KPS LVS Q G E+A * F ++ILHS CEQSGRIHP+HT RS* QDHSIY*P
Sbjct: 445 HSRHPKPSSLVSTQAVGPESARAV*YFPLKILHSTCEQSGRIHPSHTRRS**QDHSIY*P 266
Query: 249 YQYSWTSLLPPSLHSIHDISHTHR 178
Y+ SW S +PPSLH+IHDISHT R
Sbjct: 265 YRCSWISSIPPSLHNIHDISHTRR 194
Score = 211 bits (456), Expect = 2e-054
Identities = 98/144 (68%), Positives = 109/144 (75%)
Frame = -1 / -2
Query: 608 KSVVIERHLHEVRLDKITCSTNSC*TVELLSPGYLVFVVIQSGN*S*AKSCNFSQWSTYS 429
KSV+ E HLHEV LDKIT ST S ++LLSP YLV VV+QS N* AKS NFS YS
Sbjct: 624 KSVIREWHLHEVCLDKITSSTKSYRPIKLLSPSYLVVVVVQSSN*GGAKSRNFS*RPAYS 445
Query: 428 TAHI*NLHSWFQTKLQGKKMLMSLDAFT*GFSIPSVSKVEGFTPTILIEASGKIIVFINH 249
TA I NLH WFQ KL G+K+L+ D F * FS P VSKVEGFTP IL+EAS KIIVFINH
Sbjct: 444 TADIQNLHPWFQLKL*GQKVLVPFDTFP*RFSTPPVSKVEGFTPAILVEASSKIIVFINH 265
Query: 248 ISIVGLPCFLLPSIVSMIFLILID 177
I +VG P FLLPSI+SMIFLIL+D
Sbjct: 264 IGVVGFPRFLLPSIISMIFLILVD 193
Score = 139 bits (299), Expect = 1e-032
Identities = 78/128 (60%), Positives = 84/128 (65%)
Frame = +1 / +2
Query: 178 SMSMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKAS 357
S SMRNIMD MEGRR +G+PT IWLINTMIL LAS SM GVNPSTLLT G+EN K S
Sbjct: 194 STSMRNIMDIMEGRRNRGNPTTPIWLINTMILLLASTSMAGVNPSTLLTGGVENL*GKVS 373
Query: 358 SDMSIFLPCNLV*NQE*RF*MWAVE*VDH*EKXXXXXXXXXPD*ITTNTR*PGERSSTV* 537
+ S F P +L *NQ *RF M AVE* *EK D* TT TR* GERS
Sbjct: 374 NGTSTFWPYSLS*NQG*RFWMSAVE*AGR*EKLRDLAPPQLLD*TTTTTR*LGERSLIGL 553
Query: 538 QELVEHVI 561
+LVE VI
Sbjct: 554 *DLVELVI 577
Score = 135 bits (290), Expect(2) = 1e-043
Identities = 59/97 (60%), Positives = 68/97 (70%)
Frame = +2 / +3
Query: 317 CSQMEWRILT*KHQAT*AFSCPATWFETRNEGFRCGLWNRWTTERNCKI*LNFSYRIE*Q 496
CSQ+EWRI K+Q A S P ETR+EGF C LWNR +RNC+I*L+ SY IE Q
Sbjct: 333 CSQVEWRIFKGKYQTARALSGPTA*VETRDEGFGCRLWNRRAVKRNCEI*LHLSYWIEQQ 512
Query: 497 RIPDNQGKGAQPFSRN*WNM*FCQGGLHEDAVR*QHF 607
R+PDN GKGA R *WN+*FCQG LHEDA+ * HF
Sbjct: 513 RLPDN*GKGA*SVCRT*WNL*FCQGRLHEDAIL**HF 623
Score = 60.6 bits (126), Expect(2) = 1e-043
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +2 / +3
Query: 161 TGHLIRR*V*EISWILWREGGSKEVQLY*YG**IL*SCH* 280
T + R V*EISWILWREGG +E+QL+ YG**IL*SC+*
Sbjct: 177 TSQIGGRRV*EISWILWREGGIEEIQLHRYG**IL*SCY* 296
>gb|AL507698.1|AL507698 AL507698 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06J16V 5',
mRNA sequence
Length = 700
Score = 267 bits (577), Expect(2) = 2e-078
Identities = 106/113 (93%), Positives = 110/113 (97%)
Frame = +3 / +2
Query: 225 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 404
+RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW+GESLRESIKRHEHFLALQL LKPG
Sbjct: 224 SRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWSGESLRESIKRHEHFLALQLELKPG 403
Query: 405 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDF 563
MKVLDVGCGIGGPLREIARFSSTSVTGLNNN+YQITRGKELNR G+SGTCDF
Sbjct: 404 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNDYQITRGKELNRSVGLSGTCDF 562
Score = 233 bits (503), Expect(2) = 2e-066
Identities = 101/112 (90%), Positives = 103/112 (91%)
Frame = -2 / -2
Query: 562 KSHVPLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSC 383
KS VPL P RLSSFPLVIW SLLFNPVTEVELNLAISL+GPPIPQPTSKTFIPGF SC
Sbjct: 561 KSQVPLSPTDRLSSFPLVIW*SLLFNPVTEVELNLAISLNGPPIPQPTSKTFIPGFNSSC 382
Query: 382 RARKCSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 227
RARKCSCRL+LS KDSP HL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL
Sbjct: 381 RARKCSCRLILSLKDSPLHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 226
Score = 194 bits (418), Expect(2) = 1e-052
Identities = 86/129 (66%), Positives = 96/129 (74%)
Frame = -3 / -3
Query: 564 QNHMFH*FLLNG*APFPWLSGIRCYSIR*LKLS*ILQFLSVVHLFHSPHLKPSFLVSNQV 385
+NH FH* L *APFP LSG RC SI+*L+ S*I QFL LFHS H KPS LVS Q
Sbjct: 563 KNHKFH*VLQTD*APFP*LSGSRCCSIQ*LRWS*ISQFLLTARLFHSRHPKPSSLVSTQA 384
Query: 384 AGQENAHVA*CFHVRILHSICEQSGRIHPNHTHRS*WQDHSIY*PYQYSWTSLLPPSLHS 205
G E+A * F ++ILHS CEQSGRIHP+HT RS* QDHSIY*PY+ SW S +PPSLH+
Sbjct: 383 VGPESARAV*YFPLKILHSTCEQSGRIHPSHTRRS**QDHSIY*PYRCSWISSIPPSLHN 204
Query: 204 IHDISHTHR 178
IHDISHT R
Sbjct: 203 IHDISHTRR 177
Score = 189 bits (408), Expect(2) = 3e-050
Identities = 88/131 (67%), Positives = 98/131 (74%)
Frame = -1 / -1
Query: 569 LDKITCSTNSC*TVELLSPGYLVFVVIQSGN*S*AKSCNFSQWSTYSTAHI*NLHSWFQT 390
L KIT ST S ++LLSP YLV VV+QS N* AKS NFS YSTA I NLH WFQ
Sbjct: 568 LTKITSSTKSYRPIKLLSPSYLVVVVVQSSN*GGAKSRNFS*RPAYSTADIQNLHPWFQL 389
Query: 389 KLQGKKMLMSLDAFT*GFSIPSVSKVEGFTPTILIEASGKIIVFINHISIVGLPCFLLPS 210
KL G+K+L+ D F * FS P VSKVEGFTP IL+EAS KIIVFINHI +VG P FLLPS
Sbjct: 388 KL*GQKVLVPFDTFP*RFSTPPVSKVEGFTPAILVEASSKIIVFINHIGVVGFPRFLLPS 209
Query: 209 IVSMIFLILID 177
I+SMIFLIL+D
Sbjct: 208 IISMIFLILVD 176
Score = 139 bits (299), Expect = 1e-032
Identities = 78/128 (60%), Positives = 84/128 (65%)
Frame = +1 / +3
Query: 178 SMSMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKAS 357
S SMRNIMD MEGRR +G+PT IWLINTMIL LAS SM GVNPSTLLT G+EN K S
Sbjct: 177 STSMRNIMDIMEGRRNRGNPTTPIWLINTMILLLASTSMAGVNPSTLLTGGVENL*GKVS 356
Query: 358 SDMSIFLPCNLV*NQE*RF*MWAVE*VDH*EKXXXXXXXXXPD*ITTNTR*PGERSSTV* 537
+ S F P +L *NQ *RF M AVE* *EK D* TT TR* GERS
Sbjct: 357 NGTSTFWPYSLS*NQG*RFWMSAVE*AGR*EKLRDLAPPQLLD*TTTTTR*LGERSLIGL 536
Query: 538 QELVEHVI 561
+LVE VI
Sbjct: 537 *DLVELVI 560
Score = 109 bits (233), Expect(3) = 3e-041
Identities = 48/82 (58%), Positives = 56/82 (68%)
Frame = +2 / +1
Query: 317 CSQMEWRILT*KHQAT*AFSCPATWFETRNEGFRCGLWNRWTTERNCKI*LNFSYRIE*Q 496
CSQ+EWRI K+Q A S P ETR+EGF C LWNR +RNC+I*L+ SY IE Q
Sbjct: 316 CSQVEWRIFKGKYQTARALSGPTA*VETRDEGFGCRLWNRRAVKRNCEI*LHLSYWIEQQ 495
Query: 497 RIPDNQGKGAQPFSRN*WNM*F 562
R+PDN GKGA R *WN+*F
Sbjct: 496 RLPDN*GKGA*SVCRT*WNL*F 561
Score = 60.6 bits (126), Expect(3) = 3e-041
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +2 / +1
Query: 161 TGHLIRR*V*EISWILWREGGSKEVQLY*YG**IL*SCH* 280
T + R V*EISWILWREGG +E+QL+ YG**IL*SC+*
Sbjct: 160 TSQIGGRRV*EISWILWREGGIEEIQLHRYG**IL*SCY* 279
Score = 45.1 bits (92), Expect(2) = 2e-078
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 561 FVKADFMKMPFDDNTFDA 614
FVKADFMKMPF DNTFDA
Sbjct: 561 FVKADFMKMPFSDNTFDA 614
Score = 39.1 bits (79), Expect(2) = 2e-066
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2 / -1
Query: 613 ASKVLSSNGIFMKSALTK 560
ASKVLS NGIFMKSALTK
Sbjct: 613 ASKVLSENGIFMKSALTK 560
Score = 36.3 bits (73), Expect(3) = 3e-041
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 560 FCQGGLHEDAVR*QHF*C 613
FCQG LHEDA+ * HF*C
Sbjct: 560 FCQGRLHEDAIL**HF*C 613
Score = 32.2 bits (64), Expect(2) = 1e-052
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -1 / -3
Query: 614 SIKSVVIERHLHEVRLDK 561
SIKSV+ E HLHEV LDK
Sbjct: 614 SIKSVIREWHLHEVCLDK 561
Score = 28.6 bits (56), Expect(2) = 3e-050
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -3 / -2
Query: 612 HQKCCHRTASS*SPP*Q 562
HQKC R ASS*S P*Q
Sbjct: 612 HQKCYQRMASS*SLP*Q 562
>gb|BG300712.2|BG300712 HVSMEb0018B21f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0018B21f, mRNA sequence
Length = 601
Score = 291 bits (629), Expect = 3e-078
Identities = 116/125 (92%), Positives = 120/125 (96%)
Frame = +3 / +1
Query: 225 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 404
+RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW+GESLRESIKRHEHFLALQL LKPG
Sbjct: 226 SRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWSGESLRESIKRHEHFLALQLELKPG 405
Query: 405 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMK 584
MKVLDVGCGIGGPLREIARFSSTSVTGLNNN+YQITRGKELNR G+SGTCD VKADFMK
Sbjct: 406 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNDYQITRGKELNRSVGLSGTCDXVKADFMK 585
Query: 585 MPFDD 599
MPF D
Sbjct: 586 MPFSD 600
Score = 254 bits (550), Expect = 2e-067
Identities = 111/124 (89%), Positives = 113/124 (91%)
Frame = -2 / -3
Query: 598 SSNGIFMKSALTKSHVPLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPPIPQPT 419
S NGIFMKSALT S VPL P RLSSFPLVIW SLLFNPVTEVELNLAISL+GPPIPQPT
Sbjct: 599 SENGIFMKSALTXSQVPLSPTDRLSSFPLVIW*SLLFNPVTEVELNLAISLNGPPIPQPT 420
Query: 418 SKTFIPGFKPSCRARKCSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLLTISV* 239
SKTFIPGF SCRARKCSCRL+LS KDSP HL*AKWKDSPQPYS*KLVARS*YLLTISV*
Sbjct: 419 SKTFIPGFNSSCRARKCSCRLILSLKDSPLHL*AKWKDSPQPYS*KLVARS*YLLTISV* 240
Query: 238 LDFL 227
LDFL
Sbjct: 239 LDFL 228
Score = 205 bits (442), Expect = 2e-052
Identities = 94/139 (67%), Positives = 103/139 (74%)
Frame = -3 / -1
Query: 594 RTASS*SPP*QNHMFH*FLLNG*APFPWLSGIRCYSIR*LKLS*ILQFLSVVHLFHSPHL 415
R ASS*S P* NH FH* L *APFP LSG RC SI+*L+ S*I QFL LFHS H
Sbjct: 595 RMASS*SLP*XNHKFH*VLQTD*APFP*LSGSRCCSIQ*LRWS*ISQFLLTARLFHSRHP 416
Query: 414 KPSFLVSNQVAGQENAHVA*CFHVRILHSICEQSGRIHPNHTHRS*WQDHSIY*PYQYSW 235
KPS LVS Q G E+A * F ++ILHS CEQSGRIHP+HT RS* QDHSIY*PY+ SW
Sbjct: 415 KPSSLVSTQAVGPESARAV*YFPLKILHSTCEQSGRIHPSHTRRS**QDHSIY*PYRCSW 236
Query: 234 TSLLPPSLHSIHDISHTHR 178
S +PPSLH+IHDISHT R
Sbjct: 235 ISSIPPSLHNIHDISHTRR 179
Score = 203 bits (437), Expect = 9e-052
Identities = 94/139 (67%), Positives = 104/139 (74%)
Frame = -1 / -2
Query: 593 ERHLHEVRLDKITCSTNSC*TVELLSPGYLVFVVIQSGN*S*AKSCNFSQWSTYSTAHI* 414
E HLHEV LD IT ST S ++LLSP YLV VV+QS N* AKS NFS YSTA I
Sbjct: 594 EWHLHEVCLDXITSSTKSYRPIKLLSPSYLVVVVVQSSN*GGAKSRNFS*RPAYSTADIQ 415
Query: 413 NLHSWFQTKLQGKKMLMSLDAFT*GFSIPSVSKVEGFTPTILIEASGKIIVFINHISIVG 234
NLH WFQ KL G+K+L+ D F * FS P VSKVEGFTP IL+EAS KIIVFINHI +VG
Sbjct: 414 NLHPWFQLKL*GQKVLVPFDTFP*RFSTPPVSKVEGFTPAILVEASSKIIVFINHIGVVG 235
Query: 233 LPCFLLPSIVSMIFLILID 177
P FLLPSI+SMIFLIL+D
Sbjct: 234 FPRFLLPSIISMIFLILVD 178
Score = 139 bits (299), Expect = 1e-032
Identities = 78/128 (60%), Positives = 84/128 (65%)
Frame = +1 / +2
Query: 178 SMSMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKAS 357
S SMRNIMD MEGRR +G+PT IWLINTMIL LAS SM GVNPSTLLT G+EN K S
Sbjct: 179 STSMRNIMDIMEGRRNRGNPTTPIWLINTMILLLASTSMAGVNPSTLLTGGVENL*GKVS 358
Query: 358 SDMSIFLPCNLV*NQE*RF*MWAVE*VDH*EKXXXXXXXXXPD*ITTNTR*PGERSSTV* 537
+ S F P +L *NQ *RF M AVE* *EK D* TT TR* GERS
Sbjct: 359 NGTSTFWPYSLS*NQG*RFWMSAVE*AGR*EKLRDLAPPQLLD*TTTTTR*LGERSLIGL 538
Query: 538 QELVEHVI 561
+LVE VI
Sbjct: 539 *DLVELVI 562
Score = 128 bits (274), Expect(2) = 2e-041
Identities = 55/92 (59%), Positives = 64/92 (69%)
Frame = +2 / +3
Query: 317 CSQMEWRILT*KHQAT*AFSCPATWFETRNEGFRCGLWNRWTTERNCKI*LNFSYRIE*Q 496
CSQ+EWRI K+Q A S P ETR+EGF C LWNR +RNC+I*L+ SY IE Q
Sbjct: 318 CSQVEWRIFKGKYQTARALSGPTA*VETRDEGFGCRLWNRRAVKRNCEI*LHLSYWIEQQ 497
Query: 497 RIPDNQGKGAQPFSRN*WNM*FCQGGLHEDAV 592
R+PDN GKGA R *WN+* CQG LHEDA+
Sbjct: 498 RLPDN*GKGA*SVCRT*WNL*XCQGRLHEDAI 593
Score = 60.6 bits (126), Expect(2) = 2e-041
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +2 / +3
Query: 161 TGHLIRR*V*EISWILWREGGSKEVQLY*YG**IL*SCH* 280
T + R V*EISWILWREGG +E+QL+ YG**IL*SC+*
Sbjct: 162 TSQIGGRRV*EISWILWREGGIEEIQLHRYG**IL*SCY* 281
>gb|AV932284.1|AV932284 AV932284 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2p18 5', mRNA sequence
Length = 469
Score = 264 bits (571), Expect = 3e-070
Identities = 105/112 (93%), Positives = 109/112 (97%)
Frame = +3 / +2
Query: 225 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 404
+RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW+GESLRESIKRHEHFLALQL LKPG
Sbjct: 134 SRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWSGESLRESIKRHEHFLALQLELKPG 313
Query: 405 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCD 560
MKVLDVGCGIGGPLREIARFSSTSVTGLNNN+YQITRGKELNR G+SGTCD
Sbjct: 314 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNDYQITRGKELNRSVGLSGTCD 469
Score = 231 bits (498), Expect = 4e-060
Identities = 100/111 (90%), Positives = 102/111 (91%)
Frame = -2 / -2
Query: 559 SHVPLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCR 380
S VPL P RLSSFPLVIW SLLFNPVTEVELNLAISL+GPPIPQPTSKTFIPGF SCR
Sbjct: 468 SQVPLSPTDRLSSFPLVIW*SLLFNPVTEVELNLAISLNGPPIPQPTSKTFIPGFNSSCR 289
Query: 379 ARKCSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 227
ARKCSCRL+LS KDSP HL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL
Sbjct: 288 ARKCSCRLILSLKDSPLHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 136
Score = 191 bits (411), Expect = 4e-048
Identities = 85/127 (66%), Positives = 94/127 (74%)
Frame = -3 / -3
Query: 558 HMFH*FLLNG*APFPWLSGIRCYSIR*LKLS*ILQFLSVVHLFHSPHLKPSFLVSNQVAG 379
H FH* L *APFP LSG RC SI+*L+ S*I QFL LFHS H KPS LVS Q G
Sbjct: 467 HKFH*VLQTD*APFP*LSGSRCCSIQ*LRWS*ISQFLLTARLFHSRHPKPSSLVSTQAVG 288
Query: 378 QENAHVA*CFHVRILHSICEQSGRIHPNHTHRS*WQDHSIY*PYQYSWTSLLPPSLHSIH 199
E+A * F ++ILHS CEQSGRIHP+HT RS* QDHSIY*PY+ SW S +PPSLH+IH
Sbjct: 287 PESARAV*YFPLKILHSTCEQSGRIHPSHTRRS**QDHSIY*PYRCSWISSIPPSLHNIH 108
Query: 198 DISHTHR 178
DISHT R
Sbjct: 107 DISHTRR 87
Score = 186 bits (400), Expect = 1e-046
Identities = 86/128 (67%), Positives = 96/128 (75%)
Frame = -1 / -1
Query: 560 ITCSTNSC*TVELLSPGYLVFVVIQSGN*S*AKSCNFSQWSTYSTAHI*NLHSWFQTKLQ 381
IT ST S ++LLSP YLV VV+QS N* AKS NFS YSTA I NLH WFQ KL
Sbjct: 469 ITSSTKSYRPIKLLSPSYLVVVVVQSSN*GGAKSRNFS*RPAYSTADIQNLHPWFQLKL* 290
Query: 380 GKKMLMSLDAFT*GFSIPSVSKVEGFTPTILIEASGKIIVFINHISIVGLPCFLLPSIVS 201
G+K+L+ D F * FS P VSKVEGFTP IL+EAS KIIVFINHI +VG P FLLPSI+S
Sbjct: 289 GQKVLVPFDTFP*RFSTPPVSKVEGFTPAILVEASSKIIVFINHIGVVGFPRFLLPSIIS 110
Query: 200 MIFLILID 177
MIFLIL+D
Sbjct: 109 MIFLILVD 86
Score = 138 bits (295), Expect = 4e-032
Identities = 77/127 (60%), Positives = 83/127 (65%)
Frame = +1 / +3
Query: 178 SMSMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKAS 357
S SMRNIMD MEGRR +G+PT IWLINTMIL LAS SM GVNPSTLLT G+EN K S
Sbjct: 87 STSMRNIMDIMEGRRNRGNPTTPIWLINTMILLLASTSMAGVNPSTLLTGGVENL*GKVS 266
Query: 358 SDMSIFLPCNLV*NQE*RF*MWAVE*VDH*EKXXXXXXXXXPD*ITTNTR*PGERSSTV* 537
+ S F P +L *NQ *RF M AVE* *EK D* TT TR* GERS
Sbjct: 267 NGTSTFWPYSLS*NQG*RFWMSAVE*AGR*EKLRDLAPPQLLD*TTTTTR*LGERSLIGL 446
Query: 538 QELVEHV 558
+LVE V
Sbjct: 447 *DLVELV 467
Score = 106 bits (227), Expect(2) = 5e-035
Identities = 47/81 (58%), Positives = 55/81 (67%)
Frame = +2 / +1
Query: 317 CSQMEWRILT*KHQAT*AFSCPATWFETRNEGFRCGLWNRWTTERNCKI*LNFSYRIE*Q 496
CSQ+EWRI K+Q A S P ETR+EGF C LWNR +RNC+I*L+ SY IE Q
Sbjct: 226 CSQVEWRIFKGKYQTARALSGPTA*VETRDEGFGCRLWNRRAVKRNCEI*LHLSYWIEQQ 405
Query: 497 RIPDNQGKGAQPFSRN*WNM* 559
R+PDN GKGA R *WN+*
Sbjct: 406 RLPDN*GKGA*SVCRT*WNL* 468
Score = 60.6 bits (126), Expect(2) = 5e-035
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +2 / +1
Query: 161 TGHLIRR*V*EISWILWREGGSKEVQLY*YG**IL*SCH* 280
T + R V*EISWILWREGG +E+QL+ YG**IL*SC+*
Sbjct: 70 TSQIGGRRV*EISWILWREGGIEEIQLHRYG**IL*SCY* 189
>gb|BU984788.1|BU984788 HF05A10r HF Hordeum vulgare subsp. vulgare cDNA clone HF05A10
5-PRIME, mRNA sequence
Length = 567
Score = 261 bits (565), Expect = 2e-069
Identities = 104/111 (93%), Positives = 108/111 (97%)
Frame = +3 / +3
Query: 225 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 404
+RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW+GESLRESIKRHEHFLALQL LKPG
Sbjct: 234 SRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWSGESLRESIKRHEHFLALQLELKPG 413
Query: 405 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTC 557
MKVLDVGCGIGGPLREIARFSSTSVTGLNNN+YQITRGKELNR G+SGTC
Sbjct: 414 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNDYQITRGKELNRSVGLSGTC 566
Score = 229 bits (494), Expect = 1e-059
Identities = 99/109 (90%), Positives = 101/109 (92%)
Frame = -2 / -3
Query: 553 VPLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRAR 374
VPL P RLSSFPLVIW SLLFNPVTEVELNLAISL+GPPIPQPTSKTFIPGF SCRAR
Sbjct: 562 VPLSPTDRLSSFPLVIW*SLLFNPVTEVELNLAISLNGPPIPQPTSKTFIPGFNSSCRAR 383
Query: 373 KCSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 227
KCSCRL+LS KDSP HL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL
Sbjct: 382 KCSCRLILSLKDSPLHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 236
Score = 191 bits (411), Expect = 4e-048
Identities = 85/127 (66%), Positives = 94/127 (74%)
Frame = -3 / -1
Query: 558 HMFH*FLLNG*APFPWLSGIRCYSIR*LKLS*ILQFLSVVHLFHSPHLKPSFLVSNQVAG 379
H FH* L *APFP LSG RC SI+*L+ S*I QFL LFHS H KPS LVS Q G
Sbjct: 567 HKFH*VLQTD*APFP*LSGSRCCSIQ*LRWS*ISQFLLTARLFHSRHPKPSSLVSTQAVG 388
Query: 378 QENAHVA*CFHVRILHSICEQSGRIHPNHTHRS*WQDHSIY*PYQYSWTSLLPPSLHSIH 199
E+A * F ++ILHS CEQSGRIHP+HT RS* QDHSIY*PY+ SW S +PPSLH+IH
Sbjct: 387 PESARAV*YFPLKILHSTCEQSGRIHPSHTRRS**QDHSIY*PYRCSWISSIPPSLHNIH 208
Query: 198 DISHTHR 178
DISHT R
Sbjct: 207 DISHTRR 187
Score = 184 bits (396), Expect = 4e-046
Identities = 85/127 (66%), Positives = 95/127 (74%)
Frame = -1 / -2
Query: 557 TCSTNSC*TVELLSPGYLVFVVIQSGN*S*AKSCNFSQWSTYSTAHI*NLHSWFQTKLQG 378
T ST S ++LLSP YLV VV+QS N* AKS NFS YSTA I NLH WFQ KL G
Sbjct: 566 TSSTKSYRPIKLLSPSYLVVVVVQSSN*GGAKSRNFS*RPAYSTADIQNLHPWFQLKL*G 387
Query: 377 KKMLMSLDAFT*GFSIPSVSKVEGFTPTILIEASGKIIVFINHISIVGLPCFLLPSIVSM 198
+K+L+ D F * FS P VSKVEGFTP IL+EAS KIIVFINHI +VG P FLLPSI+SM
Sbjct: 386 QKVLVPFDTFP*RFSTPPVSKVEGFTPAILVEASSKIIVFINHIGVVGFPRFLLPSIISM 207
Query: 197 IFLILID 177
IFLIL+D
Sbjct: 206 IFLILVD 186
Score = 138 bits (295), Expect = 4e-032
Identities = 77/127 (60%), Positives = 83/127 (65%)
Frame = +1 / +1
Query: 178 SMSMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKAS 357
S SMRNIMD MEGRR +G+PT IWLINTMIL LAS SM GVNPSTLLT G+EN K S
Sbjct: 187 STSMRNIMDIMEGRRNRGNPTTPIWLINTMILLLASTSMAGVNPSTLLTGGVENL*GKVS 366
Query: 358 SDMSIFLPCNLV*NQE*RF*MWAVE*VDH*EKXXXXXXXXXPD*ITTNTR*PGERSSTV* 537
+ S F P +L *NQ *RF M AVE* *EK D* TT TR* GERS
Sbjct: 367 NGTSTFWPYSLS*NQG*RFWMSAVE*AGR*EKLRDLAPPQLLD*TTTTTR*LGERSLIGL 546
Query: 538 QELVEHV 558
+LVE V
Sbjct: 547 *DLVELV 567
Score = 106 bits (226), Expect(2) = 6e-035
Identities = 46/80 (57%), Positives = 54/80 (67%)
Frame = +2 / +2
Query: 317 CSQMEWRILT*KHQAT*AFSCPATWFETRNEGFRCGLWNRWTTERNCKI*LNFSYRIE*Q 496
CSQ+EWRI K+Q A S P ETR+EGF C LWNR +RNC+I*L+ SY IE Q
Sbjct: 326 CSQVEWRIFKGKYQTARALSGPTA*VETRDEGFGCRLWNRRAVKRNCEI*LHLSYWIEQQ 505
Query: 497 RIPDNQGKGAQPFSRN*WNM 556
R+PDN GKGA R *WN+
Sbjct: 506 RLPDN*GKGA*SVCRT*WNL 565
Score = 60.6 bits (126), Expect(2) = 6e-035
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +2 / +2
Query: 161 TGHLIRR*V*EISWILWREGGSKEVQLY*YG**IL*SCH* 280
T + R V*EISWILWREGG +E+QL+ YG**IL*SC+*
Sbjct: 170 TSQIGGRRV*EISWILWREGGIEEIQLHRYG**IL*SCY* 289
>gb|CA012169.1|CA012169 HT04K11r HT Hordeum vulgare subsp. vulgare cDNA clone HT04K11
5-PRIME, mRNA sequence
Length = 507
Score = 261 bits (565), Expect = 2e-069
Identities = 104/111 (93%), Positives = 108/111 (97%)
Frame = +3 / +3
Query: 225 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 404
+RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW+GESLRESIKRHEHFLALQL LKPG
Sbjct: 174 SRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWSGESLRESIKRHEHFLALQLELKPG 353
Query: 405 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTC 557
MKVLDVGCGIGGPLREIARFSSTSVTGLNNN+YQITRGKELNR G+SGTC
Sbjct: 354 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNDYQITRGKELNRSVGLSGTC 506
Score = 229 bits (494), Expect = 1e-059
Identities = 99/109 (90%), Positives = 101/109 (92%)
Frame = -2 / -3
Query: 553 VPLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRAR 374
VPL P RLSSFPLVIW SLLFNPVTEVELNLAISL+GPPIPQPTSKTFIPGF SCRAR
Sbjct: 502 VPLSPTDRLSSFPLVIW*SLLFNPVTEVELNLAISLNGPPIPQPTSKTFIPGFNSSCRAR 323
Query: 373 KCSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 227
KCSCRL+LS KDSP HL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL
Sbjct: 322 KCSCRLILSLKDSPLHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 176
Score = 191 bits (411), Expect = 4e-048
Identities = 85/127 (66%), Positives = 94/127 (74%)
Frame = -3 / -1
Query: 558 HMFH*FLLNG*APFPWLSGIRCYSIR*LKLS*ILQFLSVVHLFHSPHLKPSFLVSNQVAG 379
H FH* L *APFP LSG RC SI+*L+ S*I QFL LFHS H KPS LVS Q G
Sbjct: 507 HKFH*VLQTD*APFP*LSGSRCCSIQ*LRWS*ISQFLLTARLFHSRHPKPSSLVSTQAVG 328
Query: 378 QENAHVA*CFHVRILHSICEQSGRIHPNHTHRS*WQDHSIY*PYQYSWTSLLPPSLHSIH 199
E+A * F ++ILHS CEQSGRIHP+HT RS* QDHSIY*PY+ SW S +PPSLH+IH
Sbjct: 327 PESARAV*YFPLKILHSTCEQSGRIHPSHTRRS**QDHSIY*PYRCSWISSIPPSLHNIH 148
Query: 198 DISHTHR 178
DISHT R
Sbjct: 147 DISHTRR 127
Score = 184 bits (396), Expect = 4e-046
Identities = 85/127 (66%), Positives = 95/127 (74%)
Frame = -1 / -2
Query: 557 TCSTNSC*TVELLSPGYLVFVVIQSGN*S*AKSCNFSQWSTYSTAHI*NLHSWFQTKLQG 378
T ST S ++LLSP YLV VV+QS N* AKS NFS YSTA I NLH WFQ KL G
Sbjct: 506 TSSTKSYRPIKLLSPSYLVVVVVQSSN*GGAKSRNFS*RPAYSTADIQNLHPWFQLKL*G 327
Query: 377 KKMLMSLDAFT*GFSIPSVSKVEGFTPTILIEASGKIIVFINHISIVGLPCFLLPSIVSM 198
+K+L+ D F * FS P VSKVEGFTP IL+EAS KIIVFINHI +VG P FLLPSI+SM
Sbjct: 326 QKVLVPFDTFP*RFSTPPVSKVEGFTPAILVEASSKIIVFINHIGVVGFPRFLLPSIISM 147
Query: 197 IFLILID 177
IFLIL+D
Sbjct: 146 IFLILVD 126
Score = 138 bits (295), Expect = 4e-032
Identities = 77/127 (60%), Positives = 83/127 (65%)
Frame = +1 / +1
Query: 178 SMSMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKAS 357
S SMRNIMD MEGRR +G+PT IWLINTMIL LAS SM GVNPSTLLT G+EN K S
Sbjct: 127 STSMRNIMDIMEGRRNRGNPTTPIWLINTMILLLASTSMAGVNPSTLLTGGVENL*GKVS 306
Query: 358 SDMSIFLPCNLV*NQE*RF*MWAVE*VDH*EKXXXXXXXXXPD*ITTNTR*PGERSSTV* 537
+ S F P +L *NQ *RF M AVE* *EK D* TT TR* GERS
Sbjct: 307 NGTSTFWPYSLS*NQG*RFWMSAVE*AGR*EKLRDLAPPQLLD*TTTTTR*LGERSLIGL 486
Query: 538 QELVEHV 558
+LVE V
Sbjct: 487 *DLVELV 507
Score = 106 bits (226), Expect(2) = 6e-035
Identities = 46/80 (57%), Positives = 54/80 (67%)
Frame = +2 / +2
Query: 317 CSQMEWRILT*KHQAT*AFSCPATWFETRNEGFRCGLWNRWTTERNCKI*LNFSYRIE*Q 496
CSQ+EWRI K+Q A S P ETR+EGF C LWNR +RNC+I*L+ SY IE Q
Sbjct: 266 CSQVEWRIFKGKYQTARALSGPTA*VETRDEGFGCRLWNRRAVKRNCEI*LHLSYWIEQQ 445
Query: 497 RIPDNQGKGAQPFSRN*WNM 556
R+PDN GKGA R *WN+
Sbjct: 446 RLPDN*GKGA*SVCRT*WNL 505
Score = 60.6 bits (126), Expect(2) = 6e-035
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +2 / +2
Query: 161 TGHLIRR*V*EISWILWREGGSKEVQLY*YG**IL*SCH* 280
T + R V*EISWILWREGG +E+QL+ YG**IL*SC+*
Sbjct: 110 TSQIGGRRV*EISWILWREGGIEEIQLHRYG**IL*SCY* 229
>gb|AV917169.1|AV917169 AV917169 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8c03 5', mRNA sequence
Length = 503
Score = 197 bits (425), Expect(2) = 4e-065
Identities = 78/82 (95%), Positives = 80/82 (97%)
Frame = +3 / +1
Query: 225 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 404
+RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW+GESLRESIKRHEHFLALQL LKPG
Sbjct: 22 SRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWSGESLRESIKRHEHFLALQLELKPG 201
Query: 405 MKVLDVGCGIGGPLREIARFSS 470
MKVLDVGCGIGGPLREIARF S
Sbjct: 202 MKVLDVGCGIGGPLREIARFRS 267
Score = 173 bits (372), Expect(2) = 6e-054
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = -2 / -1
Query: 466 LNLAISLSGPPIPQPTSKTFIPGFKPSCRARKCSCRLMLSRKDSPFHL*AKWKDSPQPYS 287
LNLAISL+GPPIPQPTSKTFIPGF SCRARKCSCRL+LS KDSP HL*AKWKDSPQPYS
Sbjct: 263 LNLAISLNGPPIPQPTSKTFIPGFNSSCRARKCSCRLILSLKDSPLHL*AKWKDSPQPYS 84
Query: 286 *KLVARS*YLLTISV*LDFL 227
*KLVARS*YLLTISV*LDFL
Sbjct: 83 *KLVARS*YLLTISV*LDFL 24
Score = 133 bits (286), Expect(2) = 5e-039
Identities = 58/88 (65%), Positives = 65/88 (73%)
Frame = -3 / -2
Query: 468 S*ILQFLSVVHLFHSPHLKPSFLVSNQVAGQENAHVA*CFHVRILHSICEQSGRIHPNHT 289
S*I QFL LFHS H KPS LVS Q G E+A * F ++ILHS CEQSGRIHP+HT
Sbjct: 265 S*ISQFLLTARLFHSRHPKPSSLVSTQAVGPESARAV*YFPLKILHSTCEQSGRIHPSHT 86
Query: 288 HRS*WQDHSIY*PYQYSWTSLLPPSLHS 205
RS* QDHSIY*PY+ SW S +PPSLH+
Sbjct: 85 RRS**QDHSIY*PYRCSWISSIPPSLHN 2
Score = 132 bits (282), Expect(2) = 9e-038
Identities = 59/87 (67%), Positives = 65/87 (74%)
Frame = -1 / -3
Query: 464 KSCNFSQWSTYSTAHI*NLHSWFQTKLQGKKMLMSLDAFT*GFSIPSVSKVEGFTPTILI 285
KS NFS YSTA I NLH WFQ KL G+K+L+ D F * FS P VSKVEGFTP IL+
Sbjct: 261 KSRNFS*RPAYSTADIQNLHPWFQLKL*GQKVLVPFDTFP*RFSTPPVSKVEGFTPAILV 82
Query: 284 EASGKIIVFINHISIVGLPCFLLPSIV 204
EAS KIIVFINHI +VG P FLLPSI+
Sbjct: 81 EASSKIIVFINHIGVVGFPRFLLPSII 1
Score = 105 bits (225), Expect(2) = 2e-031
Identities = 54/82 (65%), Positives = 59/82 (71%)
Frame = +1 / +2
Query: 208 MEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKASSDMSIFLPCN 387
MEGRR +G+PT IWLINTMIL LAS SM GVNPSTLLT G+EN K S+ S F P +
Sbjct: 5 MEGRRNRGNPTTPIWLINTMILLLASTSMAGVNPSTLLTGGVENL*GKVSNGTSTFWPYS 184
Query: 388 LV*NQE*RF*MWAVE*VDH*EK 453
L *NQ *RF M AVE* *EK
Sbjct: 185 LS*NQG*RFWMSAVE*AGR*EK 250
Score = 70.7 bits (148), Expect(2) = 4e-065
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +3 / +3
Query: 522 ELNRLAGISGTCDFVKADFMKMPFDDNTFDA 614
ELNR G+SGTCDFVKADFMKMPF DNTFDA
Sbjct: 264 ELNRSVGLSGTCDFVKADFMKMPFSDNTFDA 356
Score = 57.4 bits (119), Expect(2) = 6e-054
Identities = 26/31 (83%), Positives = 26/31 (83%)
Frame = -2 / -2
Query: 613 ASKVLSSNGIFMKSALTKSHVPLIPAKRLSS 521
ASKVLS NGIFMKSALTKS VPL P RLSS
Sbjct: 355 ASKVLSENGIFMKSALTKSQVPLSPTDRLSS 263
Score = 49.6 bits (102), Expect(2) = 2e-031
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = +2 / +2
Query: 521 GAQPFSRN*WNM*FCQGGLHEDAVR*QHF*C 613
GA R *WN+*FCQG LHEDA+ * HF*C
Sbjct: 263 GA*SVCRT*WNL*FCQGRLHEDAIL**HF*C 355
Score = 46.9 bits (96), Expect(2) = 5e-039
Identities = 22/31 (70%), Positives = 22/31 (70%)
Frame = -3 / -3
Query: 612 HQKCCHRTASS*SPP*QNHMFH*FLLNG*AP 520
HQKC R ASS*S P*QNH FH* L *AP
Sbjct: 354 HQKCYQRMASS*SLP*QNHKFH*VLQTD*AP 262
Score = 44.6 bits (91), Expect(2) = 9e-038
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = -1 / -1
Query: 614 SIKSVVIERHLHEVRLDKITCSTNSC*TVELLS 516
SIKSV+ E HLHEV LDKIT ST S ++LL+
Sbjct: 356 SIKSVIREWHLHEVCLDKITSSTKSYRPIKLLN 258
>gb|BE215659.3|BE215659 HV_CEb0007L14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0007L14f, mRNA sequence
Length = 523
Score = 238 bits (515), Expect = 2e-062
Identities = 95/103 (92%), Positives = 98/103 (95%)
Frame = +3 / +1
Query: 225 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 404
+RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW+GESLRESIKRHEHFLALQL LKPG
Sbjct: 214 SRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWSGESLRESIKRHEHFLALQLELKPG 393
Query: 405 MKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKELNR 533
MKVLDVGCGIGGPLRE SSTSVTGLNNN+YQITRGKELNR
Sbjct: 394 MKVLDVGCGIGGPLREXCEISSTSVTGLNNNDYQITRGKELNR 522
Score = 209 bits (450), Expect = 1e-053
Identities = 91/102 (89%), Positives = 93/102 (91%)
Frame = -2 / -3
Query: 532 RLSSFPLVIWYSLLFNPVTEVELNLAISLSGPPIPQPTSKTFIPGFKPSCRARKCSCRLM 353
RLSSFPLVIW SLLFNPVTEVEL SL+GPPIPQPTSKTFIPGF SCRARKCSCRL+
Sbjct: 521 RLSSFPLVIW*SLLFNPVTEVELISQXSLNGPPIPQPTSKTFIPGFNSSCRARKCSCRLI 342
Query: 352 LSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 227
LS KDSP HL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL
Sbjct: 341 LSLKDSPLHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 216
Score = 172 bits (371), Expect = 1e-042
Identities = 78/118 (66%), Positives = 88/118 (74%)
Frame = -1 / -2
Query: 530 VELLSPGYLVFVVIQSGN*S*AKSCNFSQWSTYSTAHI*NLHSWFQTKLQGKKMLMSLDA 351
++LLSP YLV VV+QS N* A FS YSTA I NLH WFQ KL G+K+L+ D
Sbjct: 519 IKLLSPSYLVVVVVQSSN*GGANLAXFS*RPAYSTADIQNLHPWFQLKL*GQKVLVPFDT 340
Query: 350 FT*GFSIPSVSKVEGFTPTILIEASGKIIVFINHISIVGLPCFLLPSIVSMIFLILID 177
F * FS P VSKVEGFTP IL+EAS KIIVFINHI +VG P FLLPSI+SMIFLIL+D
Sbjct: 339 FP*RFSTPPVSKVEGFTPAILVEASSKIIVFINHIGVVGFPRFLLPSIISMIFLILVD 166
Score = 170 bits (365), Expect = 8e-042
Identities = 76/117 (64%), Positives = 85/117 (72%)
Frame = -3 / -1
Query: 528 *APFPWLSGIRCYSIR*LKLS*ILQFLSVVHLFHSPHLKPSFLVSNQVAGQENAHVA*CF 349
*APFP L G RC SI+*L+ S* L LFHS H KPS LVS Q G E+A * F
Sbjct: 517 *APFP*LFGSRCCSIQ*LRWS*SRNXLLTARLFHSRHPKPSSLVSTQAVGPESARAV*YF 338
Query: 348 HVRILHSICEQSGRIHPNHTHRS*WQDHSIY*PYQYSWTSLLPPSLHSIHDISHTHR 178
++ILHS CEQSGRIHP+HT RS* QDHSIY*PY+ SW S +PPSLH+IHDISHT R
Sbjct: 337 PLKILHSTCEQSGRIHPSHTRRS**QDHSIY*PYRCSWISSIPPSLHNIHDISHTRR 167
Score = 133 bits (285), Expect = 8e-031
Identities = 71/116 (61%), Positives = 77/116 (66%)
Frame = +1 / +2
Query: 178 SMSMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKAS 357
S SMRNIMD MEGRR +G+PT IWLINTMIL LAS SM GVNPSTLLT G+EN K S
Sbjct: 167 STSMRNIMDIMEGRRNRGNPTTPIWLINTMILLLASTSMAGVNPSTLLTGGVENL*GKVS 346
Query: 358 SDMSIFLPCNLV*NQE*RF*MWAVE*VDH*EKXXXXXXXXXPD*ITTNTR*PGERS 525
+ S F P +L *NQ *RF M AVE* *E D* TT T+* GERS
Sbjct: 347 NGTSTFWPYSLS*NQG*RFWMSAVE*AGR*EXIARLAPPQLLD*TTTTTK*LGERS 514
Score = 85.4 bits (180), Expect(2) = 1e-028
Identities = 38/70 (54%), Positives = 46/70 (65%)
Frame = +2 / +3
Query: 317 CSQMEWRILT*KHQAT*AFSCPATWFETRNEGFRCGLWNRWTTERNCKI*LNFSYRIE*Q 496
CSQ+EWRI K+Q A S P ETR+EGF C LWNR +R + *L+ SY IE Q
Sbjct: 306 CSQVEWRIFKGKYQTARALSGPTA*VETRDEGFGCRLWNRRAVKRXLRD*LHLSYWIEQQ 485
Query: 497 RIPDNQGKGA 526
R+P+N GKGA
Sbjct: 486 RLPNN*GKGA 515
Score = 60.6 bits (126), Expect(2) = 1e-028
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +2 / +3
Query: 161 TGHLIRR*V*EISWILWREGGSKEVQLY*YG**IL*SCH* 280
T + R V*EISWILWREGG +E+QL+ YG**IL*SC+*
Sbjct: 150 TSQIGGRRV*EISWILWREGGIEEIQLHRYG**IL*SCY* 269
>gb|BU990099.1|BU990099 HF24B10r HF Hordeum vulgare subsp. vulgare cDNA clone HF24B10
5-PRIME, mRNA sequence
Length = 592
Score = 205 bits (442), Expect = 2e-052
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = +3 / +2
Query: 345 RESIKRHEHFLALQLGLKPGMKVLDVGCGIGGPLREIARFSSTSVTGLNNNEYQITRGKE 524
RESIKRHEHFLALQL LKPGMKVLDVGCGIGGPLREIARFSSTSVTGLNNN+YQITRGKE
Sbjct: 2 RESIKRHEHFLALQLELKPGMKVLDVGCGIGGPLREIARFSSTSVTGLNNNDYQITRGKE 181
Query: 525 LNRLAGISGTCDFVKADFMKMPFDDNTFDA 614
LNR G+SGTCDFVKADFMKMPF DNTFDA
Sbjct: 182 LNRSVGLSGTCDFVKADFMKMPFSDNTFDA 271
Score = 185 bits (398), Expect = 2e-046
Identities = 79/89 (88%), Positives = 81/89 (91%)
Frame = -2 / -2
Query: 613 ASKVLSSNGIFMKSALTKSHVPLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSGPP 434
ASKVLS NGIFMKSALTKS VPL P RLSSFPLVIW SLLFNPVTEVELNLAISL+GPP
Sbjct: 270 ASKVLSENGIFMKSALTKSQVPLSPTDRLSSFPLVIW*SLLFNPVTEVELNLAISLNGPP 91
Query: 433 IPQPTSKTFIPGFKPSCRARKCSCRLMLS 347
IPQPTSKTFIPGF SCRARKCSCRL+LS
Sbjct: 90 IPQPTSKTFIPGFNSSCRARKCSCRLILS 4
Score = 122 bits (261), Expect = 2e-027
Identities = 54/88 (61%), Positives = 62/88 (70%)
Frame = +2 / +1
Query: 350 KHQAT*AFSCPATWFETRNEGFRCGLWNRWTTERNCKI*LNFSYRIE*QRIPDNQGKGAQ 529
K+Q A S P ETR+EGF C LWNR +RNC+I*L+ SY IE QR+PDN GKGA
Sbjct: 7 KYQTARALSGPTA*VETRDEGFGCRLWNRRAVKRNCEI*LHLSYWIEQQRLPDN*GKGA* 186
Query: 530 PFSRN*WNM*FCQGGLHEDAVR*QHF*C 613
R *WN+*FCQG LHEDA+ * HF*C
Sbjct: 187 SVCRT*WNL*FCQGRLHEDAIL**HF*C 270
Score = 116 bits (247), Expect = 1e-025
Identities = 56/89 (62%), Positives = 63/89 (70%)
Frame = -1 / -1
Query: 614 SIKSVVIERHLHEVRLDKITCSTNSC*TVELLSPGYLVFVVIQSGN*S*AKSCNFSQWST 435
SIKSV+ E HLHEV LDKIT ST S ++LLSP YLV VV+QS N* AKS NFS
Sbjct: 271 SIKSVIREWHLHEVCLDKITSSTKSYRPIKLLSPSYLVVVVVQSSN*GGAKSRNFS*RPA 92
Query: 434 YSTAHI*NLHSWFQTKLQGKKMLMSLDAF 348
YSTA I NLH WFQ KL G+K+L+ D F
Sbjct: 91 YSTADIQNLHPWFQLKL*GQKVLVPFDTF 5
Score = 112 bits (239), Expect = 2e-024
Identities = 56/88 (63%), Positives = 59/88 (67%)
Frame = -3 / -3
Query: 612 HQKCCHRTASS*SPP*QNHMFH*FLLNG*APFPWLSGIRCYSIR*LKLS*ILQFLSVVHL 433
HQKC R ASS*S P*QNH FH* L *APFP LSG RC SI+*L+ S*I QFL L
Sbjct: 269 HQKCYQRMASS*SLP*QNHKFH*VLQTD*APFP*LSGSRCCSIQ*LRWS*ISQFLLTARL 90
Query: 432 FHSPHLKPSFLVSNQVAGQENAHVA*CF 349
FHS H KPS LVS Q G E+A * F
Sbjct: 89 FHSRHPKPSSLVSTQAVGPESARAV*YF 6
>gb|BQ468511.1|BQ468511 HM01H13T HM Hordeum vulgare subsp. vulgare cDNA clone HM01H13
5-PRIME, mRNA sequence
Length = 525
Score = 177 bits (382), Expect = 4e-044
Identities = 69/72 (95%), Positives = 71/72 (98%)
Frame = +3 / +2
Query: 225 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPG 404
+RKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW+GESLRESIKRHEHFLALQL LKPG
Sbjct: 308 SRKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWSGESLRESIKRHEHFLALQLELKPG 487
Query: 405 MKVLDVGCGIGG 440
MKVLDVGCGIGG
Sbjct: 488 MKVLDVGCGIGG 523
Score = 159 bits (341), Expect = 2e-038
Identities = 67/72 (93%), Positives = 68/72 (94%)
Frame = -2 / -1
Query: 442 GPPIPQPTSKTFIPGFKPSCRARKCSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS* 263
GPPIPQPTSKTFIPGF SCRARKCSCRL+LS KDSP HL*AKWKDSPQPYS*KLVARS*
Sbjct: 525 GPPIPQPTSKTFIPGFNSSCRARKCSCRLILSLKDSPLHL*AKWKDSPQPYS*KLVARS* 346
Query: 262 YLLTISV*LDFL 227
YLLTISV*LDFL
Sbjct: 345 YLLTISV*LDFL 310
Score = 141 bits (303), Expect = 3e-033
Identities = 61/86 (70%), Positives = 68/86 (79%)
Frame = -1 / -3
Query: 434 YSTAHI*NLHSWFQTKLQGKKMLMSLDAFT*GFSIPSVSKVEGFTPTILIEASGKIIVFI 255
YS A I NLH WFQ KL G+K+L+ D F * FS P VSKVEGFTP IL+EAS KIIVFI
Sbjct: 517 YSAADIQNLHPWFQLKL*GQKVLVPFDTFP*RFSTPPVSKVEGFTPAILVEASSKIIVFI 338
Query: 254 NHISIVGLPCFLLPSIVSMIFLILID 177
NHI +VG P FLLPSI+SMIFLIL+D
Sbjct: 337 NHIGVVGFPRFLLPSIISMIFLILVD 260
Score = 141 bits (302), Expect = 4e-033
Identities = 59/86 (68%), Positives = 66/86 (76%)
Frame = -3 / -2
Query: 435 LFHSPHLKPSFLVSNQVAGQENAHVA*CFHVRILHSICEQSGRIHPNHTHRS*WQDHSIY 256
LF S H KPS LVS Q G E+A * F ++ILHS CEQSGRIHP+HT RS* QDHSIY
Sbjct: 518 LFRSRHPKPSSLVSTQAVGPESARAV*YFPLKILHSTCEQSGRIHPSHTRRS**QDHSIY 339
Query: 255 *PYQYSWTSLLPPSLHSIHDISHTHR 178
*PY+ SW S +PPSLH+IHDISHT R
Sbjct: 338 *PYRCSWISSIPPSLHNIHDISHTRR 261
Score = 116 bits (248), Expect = 1e-025
Identities = 58/86 (67%), Positives = 63/86 (73%)
Frame = +1 / +3
Query: 178 SMSMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKAS 357
S SMRNIMD MEGRR +G+PT IWLINTMIL LAS SM GVNPSTLLT G+EN K S
Sbjct: 261 STSMRNIMDIMEGRRNRGNPTTPIWLINTMILLLASTSMAGVNPSTLLTGGVENL*GKVS 440
Query: 358 SDMSIFLPCNLV*NQE*RF*MWAVE* 435
+ S F P +L *NQ *RF M A E*
Sbjct: 441 NGTSTFWPYSLS*NQG*RFWMSAAE* 518
>gb|BF257939.2|BF257939 HVSMEf0014E17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0014E17f, mRNA sequence
Length = 571
Score = 144 bits (310), Expect = 3e-034
Identities = 56/120 (46%), Positives = 79/120 (65%)
Frame = +3 / +2
Query: 252 VNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPGMKVLDVGCG 431
V+ +Y+L T YE+GWG+SFHF+ G S RE+ + HE +A L +PG ++LDVGCG
Sbjct: 56 VDTFYNLVTDIYEWGWGQSFHFSPSLPGRSHREATRVHEERVADLLEARPGKRLLDVGCG 235
Query: 432 IGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKMPFDDNTFD 611
+GGP+R IA S + V G+ NEYQ+ R + NR+AG+ C+ V +FM MP D +FD
Sbjct: 236 VGGPMRAIAAHSGSDVVGITINEYQVNRARSHNRMAGLDNQCEVVCGNFMAMPVPDASFD 415
>gb|BQ756038.1|BQ756038 EBem05_SQ001_G05_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ001_G05 5', mRNA sequence
Length = 406
Score = 142 bits (304), Expect = 2e-033
Identities = 55/59 (93%), Positives = 57/59 (96%)
Frame = +3 / +2
Query: 225 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKP 401
+RKSNYTDM NKYYDLATSFYEYGWGESFHFAHRW+GESLRESIKRHEHFLALQL LKP
Sbjct: 230 SRKSNYTDMGNKYYDLATSFYEYGWGESFHFAHRWSGESLRESIKRHEHFLALQLELKP 406
Score = 124 bits (266), Expect = 4e-028
Identities = 53/75 (70%), Positives = 60/75 (80%)
Frame = -1 / -1
Query: 401 WFQTKLQGKKMLMSLDAFT*GFSIPSVSKVEGFTPTILIEASGKIIVFINHISIVGLPCF 222
WFQ KL G+K+L+ D F * FS P VSKVEGFTP IL+EAS KIIVFI HI +VG P F
Sbjct: 406 WFQLKL*GQKVLVPFDTFP*RFSTPPVSKVEGFTPAILVEASSKIIVFITHIGVVGFPRF 227
Query: 221 LLPSIVSMIFLILID 177
LLPSI+SMIFLIL+D
Sbjct: 226 LLPSIISMIFLILVD 182
Score = 122 bits (262), Expect = 1e-027
Identities = 50/74 (67%), Positives = 57/74 (77%)
Frame = -3 / -3
Query: 399 VSNQVAGQENAHVA*CFHVRILHSICEQSGRIHPNHTHRS*WQDHSIY*PYQYSWTSLLP 220
VS Q G E+A * F ++ILHS CEQSGRIHP+HT RS* QDHSIY PY+ SW S +P
Sbjct: 404 VSTQAVGPESARAV*YFPLKILHSTCEQSGRIHPSHTRRS**QDHSIYYPYRCSWISSIP 225
Query: 219 PSLHSIHDISHTHR 178
PSLH+IHDISHT R
Sbjct: 224 PSLHNIHDISHTRR 183
Score = 120 bits (256), Expect = 8e-027
Identities = 52/58 (89%), Positives = 53/58 (91%)
Frame = -2 / -2
Query: 400 GFKPSCRARKCSCRLMLSRKDSPFHL*AKWKDSPQPYS*KLVARS*YLLTISV*LDFL 227
GF SCRARKCSCRL+LS KDSP HL*AKWKDSPQPYS*KLVARS*YLL ISV*LDFL
Sbjct: 405 GFNSSCRARKCSCRLILSLKDSPLHL*AKWKDSPQPYS*KLVARS*YLLPISV*LDFL 232
Score = 104 bits (222), Expect = 4e-022
Identities = 49/74 (66%), Positives = 55/74 (74%)
Frame = +1 / +3
Query: 178 SMSMRNIMDTMEGRRKQGSPTILIWLINTMILPLASMSMVGVNPSTLLTDGMENPYVKAS 357
S SMRNIMD MEGRR +G+PT IW+INTMIL LAS SM GVNPSTLLT G+EN K S
Sbjct: 183 STSMRNIMDIMEGRRNRGNPTTPIWVINTMILLLASTSMAGVNPSTLLTGGVENL*GKVS 362
Query: 358 SDMSIFLPCNLV*N 399
+ S F P +L *N
Sbjct: 363 NGTSTFWPYSLS*N 404
>gb|BQ472834.1|BQ472834 HB01F10r BC Hordeum vulgare subsp. vulgare cDNA clone HB01F10
5-PRIME, mRNA sequence
Length = 404
Score = 131 bits (281), Expect = 3e-030
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +3 / +2
Query: 441 PLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKMPFDDNTFDA 614
PLREIARFSSTSVTGLNNN+YQITRGKELNR G+SGTCDFVKADFMKMPF DNTFDA
Sbjct: 2 PLREIARFSSTSVTGLNNNDYQITRGKELNRSVGLSGTCDFVKADFMKMPFSDNTFDA 175
Score = 113 bits (242), Expect = 7e-025
Identities = 51/58 (87%), Positives = 52/58 (89%)
Frame = -2 / -3
Query: 613 ASKVLSSNGIFMKSALTKSHVPLIPAKRLSSFPLVIWYSLLFNPVTEVELNLAISLSG 440
ASKVLS NGIFMKSALTKS VPL P RLSSFPLVIW SLLFNPVTEVELNLAISL+G
Sbjct: 174 ASKVLSENGIFMKSALTKSQVPLSPTDRLSSFPLVIW*SLLFNPVTEVELNLAISLNG 1
>gb|BF266844.2|BF266844 HV_CEa0016D13f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0016D13f, mRNA sequence
Length = 571
Score = 127 bits (272), Expect = 5e-029
Identities = 51/119 (42%), Positives = 71/119 (59%)
Frame = +3 / +3
Query: 252 VNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPGMKVLDVGCG 431
V+ +Y+L T YE+GWG+SFHF+ G S R++ + HE + L +PG +VLDVGCG
Sbjct: 24 VDTFYNLVTDIYEWGWGQSFHFSPSLPGRSHRDATRVHEERVXDLLAARPGHRVLDVGCG 203
Query: 432 IGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKMPFDDNTF 608
+GGP+R I S V G N+YQ+ R + NR A + C +FM MPFD+ F
Sbjct: 204 VGGPMRAIGAHSGAHVVGFTINKYQVNRARAHNRKASVDTHCKGGCGNFMAMPFDNTFF 380
>gb|CA021300.1|CA021300 HZ39L04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39L04
5-PRIME, mRNA sequence
Length = 398
Score = 127 bits (271), Expect = 7e-029
Identities = 50/112 (44%), Positives = 71/112 (63%)
Frame = +3 / +2
Query: 252 VNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPGMKVLDVGCG 431
V+ +Y+L T Y++GWG+SFHF+ G S R++ + HE +A L +PG +VLDVGCG
Sbjct: 62 VDTFYNLVTDIYDWGWGQSFHFSPSLPGRSHRDATRVHEERVADLLAARPGHRVLDVGCG 241
Query: 432 IGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKM 587
+GGP+R IA S V G+ NEYQ+ R + NR A + C+ V +FM M
Sbjct: 242 VGGPMRAIAAHSGAHVVGITINEYQVNRARAHNRKARLDAQCEVVCGNFMAM 397
>gb|BE602586.2|BE602586 HVSMEh0100C21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0100C21f, mRNA sequence
Length = 740
Score = 122 bits (262), Expect = 1e-027
Identities = 51/120 (42%), Positives = 72/120 (60%)
Frame = +3 / +2
Query: 252 VNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPGMKVLDVGCG 431
V+ +Y+L T YE+GWG+SFHF+ G S R++ + HE +A L +PG +VLDVGCG
Sbjct: 167 VDTFYNLVTDIYEWGWGQSFHFSPSLPGRSHRDATRVHEERVADLLADRPGHRVLDVGCG 346
Query: 432 IGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKMPFDDNTFD 611
+ P+R IA + G+ NEYQ+ R + R A + C+ V +FM MPF D FD
Sbjct: 347 VSVPMRAIAAHYGAHLVGITINEYQVNRARSHIR*ARLDAHCEVVCGNFMAMPFHDAFFD 526
>gb|CA023543.1|CA023543 HZ46J08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46J08
5-PRIME, mRNA sequence
Length = 376
Score = 117 bits (251), Expect = 4e-026
Identities = 44/47 (93%), Positives = 46/47 (97%)
Frame = +3 / +1
Query: 225 ARKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRH 365
+ KSNYTDMVNKYYDLATSFYEYGWGESFHFAHRW+GESLRESIKRH
Sbjct: 235 SXKSNYTDMVNKYYDLATSFYEYGWGESFHFAHRWSGESLRESIKRH 375
Score = 113 bits (241), Expect = 1e-024
Identities = 44/58 (75%), Positives = 50/58 (86%)
Frame = -3 / -1
Query: 351 FHVRILHSICEQSGRIHPNHTHRS*WQDHSIY*PYQYSWTSLLPPSLHSIHDISHTHR 178
F ++ILHS CEQSGRIHP+HT RS* QDHSIY*PY+ SW S +PPSLH+IHDISHT R
Sbjct: 361 FPLKILHSTCEQSGRIHPSHTRRS**QDHSIY*PYRCSWISXIPPSLHNIHDISHTRR 188
Score = 104 bits (221), Expect = 6e-022
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = -1 / -2
Query: 356 DAFT*GFSIPSVSKVEGFTPTILIEASGKIIVFINHISIVGLPCFLLPSIVSMIFLILID 177
D F * FS P VSKVEGFTP IL+EAS KIIVFINHI +VG FLLPSI+SMIFLIL+D
Sbjct: 366 DTFP*RFSTPPVSKVEGFTPAILVEASSKIIVFINHIGVVGFXXFLLPSIISMIFLILVD 187
>gb|BQ757070.1|BQ757070 EBem10_SQ002_L08_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ002_L08 5', mRNA sequence
Length = 242
Score = 117 bits (250), Expect = 6e-026
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = +3 / +2
Query: 309 FHFAHRWNGESLRESIKRHEHFLALQLGLKPGMKVLDVGCGIGGPLRE 452
FHFAHRW+GESLRESIKRHEHFLALQL LKPGMKVLDVGCGIGGPLRE
Sbjct: 98 FHFAHRWSGESLRESIKRHEHFLALQLELKPGMKVLDVGCGIGGPLRE 241
Score = 107 bits (229), Expect = 5e-023
Identities = 42/48 (87%), Positives = 44/48 (91%)
Frame = -2 / -3
Query: 451 SLSGPPIPQPTSKTFIPGFKPSCRARKCSCRLMLSRKDSPFHL*AKWK 308
SL+GPPIPQPTSKTFIPGF SCRARKCSCRL+LS KDSP HL*AKWK
Sbjct: 240 SLNGPPIPQPTSKTFIPGFNSSCRARKCSCRLILSLKDSPLHL*AKWK 97
>gb|BF259042.2|BF259042 HVSMEf0017H19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017H19f, mRNA sequence
Length = 797
Score = 115 bits (245), Expect = 3e-025
Identities = 48/118 (40%), Positives = 67/118 (56%)
Frame = +3 / +2
Query: 252 VNKYYDLATSFYEYGWGESFHFAHRWNGESLRESIKRHEHFLALQLGLKPGMKVLDVGCG 431
V+ +Y+L T YE+GWG+SFHF+ G S RE+ + HE +A L +PG ++LDVGCG
Sbjct: 302 VDTFYNLVTDIYEWGWGQSFHFSPSLPGRSHREATRVHEERVADLLEARPGKRLLDVGCG 481
Query: 432 IGGPLREIARFSSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKMPFDDNT 605
+G P+R IA V G+ NEYQ+ R + NR AG+ + A F T
Sbjct: 482 VGWPMRAIAAHFGCDVVGITINEYQVNRARSHNRKAGLDSNARWCAATSWPCRFQKRT 655
>gb|CA028533.1|CA028533 HZ62F08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62F08
5-PRIME, mRNA sequence
Length = 344
Score = 113 bits (241), Expect = 1e-024
Identities = 45/50 (90%), Positives = 47/50 (94%)
Frame = +3 / +1
Query: 465 SSTSVTGLNNNEYQITRGKELNRLAGISGTCDFVKADFMKMPFDDNTFDA 614
SSTSVTGLNNN+YQITRGKELNR G+SGTCDFVKADFMKMPF DNTFDA
Sbjct: 1 SSTSVTGLNNNDYQITRGKELNRSVGLSGTCDFVKADFMKMPFSDNTFDA 150
>gb|BU975772.1|BU975772 HB32E04r BC Hordeum vulgare subsp. vulgare cDNA clone HB32E04
5-PRIME, mRNA sequence
Length = 521
Score = 101 bits (215), Expect = 4e-021
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +3 / +1
Query: 483 GLNNNEYQITRGKELNRLAGISGTCDFVKADFMKMPFDDNTFDA 614
GLNNN+YQITRGKELNR G+SGTCDFVKADFMKMPF DNTFDA
Sbjct: 13 GLNNNDYQITRGKELNRSVGLSGTCDFVKADFMKMPFSDNTFDA 144
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 242,873,560
Number of Sequences: 312970
Number of extensions: 3532309
Number of successful extensions: 47402
Number of sequences better than 1.0e-020: 32
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6489756477
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)