TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405118.2.1
(1669 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE558428.1|BE558428 HV_CEb0017J24f Hordeum vulgare seedl... 274 3e-092
gb|BE194442.1|BE194442 HVSMEh0085I24f Hordeum vulgare 5-45 ... 182 5e-088
gb|BI957446.1|BI957446 HVSMEn0009J16f Hordeum vulgare rachi... 231 8e-086
gb|BU995195.1|BU995195 HM09I05r HM Hordeum vulgare subsp. v... 277 4e-082
gb|BE216591.1|BE216591 HV_CEb0010O10f Hordeum vulgare seedl... 270 2e-080
gb|BQ763191.1|BQ763191 EBro02_SQ007_C15_R root, 3 week, hyd... 258 1e-079
gb|BE214468.1|BE214468 HV_CEb0003I17f Hordeum vulgare seedl... 234 6e-079
gb|AL507638.1|AL507638 AL507638 Hordeum vulgare Barke devel... 234 7e-074
gb|BQ469466.1|BQ469466 HM04O09r HM Hordeum vulgare subsp. v... 236 3e-073
gb|BE455755.3|BE455755 HVSMEg0019K10f Hordeum vulgare pre-a... 238 9e-073
gb|BF260353.3|BF260353 HVSMEf0021M09f Hordeum vulgare seedl... 232 2e-072
gb|BQ467847.1|BQ467847 HR01B24r HR Hordeum vulgare subsp. v... 232 2e-071
gb|BI958350.1|BI958350 HVSMEn0014I18f Hordeum vulgare rachi... 211 7e-070
gb|BQ660971.1|BQ660971 HM01F04w HM Hordeum vulgare subsp. v... 260 2e-068
gb|CB881341.1|CB881341 HM09I05w HM Hordeum vulgare subsp. v... 260 2e-068
gb|CK123411.1|CK123411 BES1824103p14 BES1824 Hordeum vulgar... 179 4e-065
gb|AL506219.1|AL506219 AL506219 Hordeum vulgare Barke devel... 192 3e-063
gb|BI957127.1|BI957127 HVSMEn0007J20f Hordeum vulgare rachi... 236 3e-061
gb|BF065565.1|BF065565 HV_CEb0012M15f Hordeum vulgare seedl... 187 4e-060
gb|CA019762.1|CA019762 HV13A16r HV Hordeum vulgare subsp. v... 192 1e-058
gb|CB858813.1|CB858813 HI08G13w HI Hordeum vulgare subsp. v... 221 9e-057
gb|BM373958.2|BM373958 EBma03_SQ003_D14_R maternal, 8 DPA, ... 190 7e-056
gb|BI957159.1|BI957159 HVSMEn0007N14f Hordeum vulgare rachi... 171 2e-055
gb|BQ468460.1|BQ468460 HM01F04T HM Hordeum vulgare subsp. v... 181 2e-055
emb|X92754.1|HVCADMRNA H.vulgare mRNA for cinnamyl alcohol ... 216 3e-055
gb|BU995486.1|BU995486 HM10G11r HM Hordeum vulgare subsp. v... 179 3e-053
gb|BU997581.1|BU997581 HI08G13r HI Hordeum vulgare subsp. v... 168 9e-052
gb|CB881629.1|CB881629 HM10G11w HM Hordeum vulgare subsp. v... 203 2e-051
gb|BQ661428.1|BQ661428 HM03H06u HM Hordeum vulgare subsp. v... 195 5e-049
gb|BQ760493.1|BQ760493 EBro02_SQ005_D11_R root, 3 week, hyd... 155 2e-047
gb|BF623534.2|BF623534 HVSMEa0002J16f Hordeum vulgare seedl... 95 7e-047
gb|BU994106.1|BU994106 HM05M03r HM Hordeum vulgare subsp. v... 93 3e-040
gb|BQ661689.1|BQ661689 HM04O09u HM Hordeum vulgare subsp. v... 166 3e-040
gb|CK124014.1|CK124014 BES1824106h23 BES1824 Hordeum vulgar... 166 3e-040
gb|AL510922.1|AL510922 AL510922 Hordeum vulgare Barke devel... 164 1e-039
gb|CA014567.1|CA014567 HT11L08r HT Hordeum vulgare subsp. v... 95 2e-039
gb|BQ768318.1|BQ768318 EBro08_SQ011_J10_R root, 3 week, dro... 95 2e-039
gb|BE559002.2|BE559002 HV_CEb0022D12f Hordeum vulgare seedl... 92 7e-039
gb|BF257384.2|BF257384 HVSMEf0012L22f Hordeum vulgare seedl... 92 1e-038
gb|BI957209.1|BI957209 HVSMEn0008C08f Hordeum vulgare rachi... 96 3e-037
gb|AL504684.1|AL504684 AL504684 Hordeum vulgare Barke roots... 94 2e-036
gb|BI951701.1|BI951701 HVSMEm0002B16f Hordeum vulgare green... 91 8e-035
gb|BG300015.1|BG300015 HVSMEa0022P19f Hordeum vulgare seedl... 82 2e-033
gb|CK125801.1|CK125801 BES1824110n12 BES1824 Hordeum vulgar... 89 2e-033
gb|AL450716.1|AL450716 AL450716 Hordeum vulgare Barke etiol... 88 5e-033
gb|BG299988.1|BG299988 HVSMEa0022N15f Hordeum vulgare seedl... 95 1e-032
gb|BF620007.2|BF620007 HVSMEc0009P20f Hordeum vulgare seedl... 86 2e-032
gb|AL509635.1|AL509635 AL509635 Hordeum vulgare Barke devel... 140 2e-032
gb|BQ758620.1|BQ758620 EBma07_SQ002_F09_R maternal, 21 DPA,... 140 2e-032
gb|AV916085.1|AV916085 AV916085 K. Sato unpublished cDNA li... 93 4e-032
gb|BJ447037.1|BJ447037 BJ447037 K. Sato unpublished cDNA li... 96 7e-032
gb|AV926512.1|AV926512 AV926512 K. Sato unpublished cDNA li... 98 1e-031
gb|AL504577.1|AL504577 AL504577 Hordeum vulgare Barke roots... 96 5e-031
gb|AL507629.1|AL507629 AL507629 Hordeum vulgare Barke devel... 133 2e-030
gb|BI951294.1|BI951294 HVSMEl0025G15f Hordeum vulgare spike... 133 2e-030
gb|BM096821.2|BM096821 EBma07_SQ001_M10_R maternal, 21 DPA,... 133 2e-030
gb|BG344700.2|BG344700 HVSMEg0015E05f Hordeum vulgare pre-a... 86 4e-030
gb|AV931399.1|AV931399 AV931399 K. Sato unpublished cDNA li... 75 4e-030
gb|BF257150.3|BF257150 HVSMEf0012A06f Hordeum vulgare seedl... 86 5e-030
gb|BQ763215.1|BQ763215 EBro02_SQ007_H14_R root, 3 week, hyd... 132 5e-030
gb|BJ465038.1|BJ465038 BJ465038 K. Sato unpublished cDNA li... 88 2e-029
gb|BF617661.3|BF617661 HVSMEc0018J01f Hordeum vulgare seedl... 95 3e-029
gb|BF623988.2|BF623988 HVSMEa0008F16f Hordeum vulgare seedl... 89 3e-029
gb|BI947283.1|BI947283 HVSMEl0005A06f Hordeum vulgare spike... 70 4e-029
gb|BJ449238.1|BJ449238 BJ449238 K. Sato unpublished cDNA li... 96 9e-029
gb|BI958905.1|BI958905 HVSMEn0017C09f Hordeum vulgare rachi... 89 3e-028
gb|BF623721.2|BF623721 HVSMEa0005C09f Hordeum vulgare seedl... 89 1e-027
gb|BJ447263.1|BJ447263 BJ447263 K. Sato unpublished cDNA li... 92 2e-027
gb|BJ454765.1|BJ454765 BJ454765 K. Sato unpublished cDNA li... 92 2e-027
gb|BF255211.2|BF255211 HVSMEf0006E02f Hordeum vulgare seedl... 77 2e-027
gb|BF254987.2|BF254987 HVSMEf0005J24f Hordeum vulgare seedl... 71 7e-027
gb|BE214050.2|BE214050 HV_CEb0002A10f Hordeum vulgare seedl... 89 2e-026
gb|CB879610.1|CB879610 HP02P10w HP Hordeum vulgare subsp. v... 90 2e-026
gb|BF624454.2|BF624454 HVSMEa0016F14f Hordeum vulgare seedl... 88 2e-026
gb|AL503387.1|AL503387 AL503387 Hordeum vulgare Barke roots... 87 1e-025
gb|CB876945.1|CB876945 HP02P10T HP Hordeum vulgare subsp. v... 74 1e-024
gb|BM370236.2|BM370236 EBro08_SQ003_H20_R root, 3 week, dro... 85 1e-024
gb|BJ456704.1|BJ456704 BJ456704 K. Sato unpublished cDNA li... 75 1e-024
gb|BJ473108.1|BJ473108 BJ473108 K. Sato unpublished cDNA li... 89 1e-024
gb|BM368384.2|BM368384 EBed01_SQ002_P23_R endosperm, 6 DPA,... 73 3e-024
gb|BF630114.2|BF630114 HVSMEb0008A03f Hordeum vulgare seedl... 89 5e-024
gb|BU995847.1|BU995847 HM11I22r HM Hordeum vulgare subsp. v... 89 1e-023
gb|CA020634.1|CA020634 HZ36O20r HZ Hordeum vulgare subsp. v... 89 1e-023
gb|BU980077.1|BU980077 HA18H11r HA Hordeum vulgare subsp. v... 89 1e-023
gb|CB878272.1|CB878272 HP07O19T HP Hordeum vulgare subsp. v... 71 2e-023
gb|CA019921.1|CA019921 HV13L15r HV Hordeum vulgare subsp. v... 74 3e-023
gb|BI960551.1|BI960551 HVSMEn0025A03f Hordeum vulgare rachi... 84 1e-022
gb|BF623160.2|BF623160 HVSMEa0014P12f Hordeum vulgare seedl... 89 5e-022
gb|BI957691.1|BI957691 HVSMEn0010L07f Hordeum vulgare rachi... 54 9e-022
gb|BI955158.1|BI955158 HVSMEm0021K16f Hordeum vulgare green... 64 9e-022
gb|CA025182.1|CA025182 HZ51H02r HZ Hordeum vulgare subsp. v... 65 9e-022
gb|BU977917.1|BU977917 HA12E09r HA Hordeum vulgare subsp. v... 69 9e-022
gb|BU978527.1|BU978527 HA13H23r HA Hordeum vulgare subsp. v... 79 4e-021
gb|BU999880.1|BU999880 HS17B20u HS Hordeum vulgare subsp. v... 75 8e-021
>gb|BE558428.1|BE558428 HV_CEb0017J24f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0017J24f, mRNA sequence
Length = 830
Score = 274 bits (592), Expect(2) = 1e-080
Identities = 119/176 (67%), Positives = 124/176 (70%)
Frame = +2 / -1
Query: 1004 GVVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 1183
GV+S KCFSGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLY
Sbjct: 599 GVISQKCFSGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLY 420
Query: 1184 DQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXXYLAXXXXXXXXXXXXXXXXXIGYFE 1363
DQIFLLQYCST AL G SRQH YL +GY E
Sbjct: 419 DQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLE 240
Query: 1364 APRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 1531
APR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 239 APRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 72
Score = 192 bits (414), Expect(3) = 3e-092
Identities = 74/77 (96%), Positives = 75/77 (97%)
Frame = -2 / +1
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 1069
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQA
Sbjct: 355 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQA 534
Query: 1068 APLLCAGVTVYSPLKHF 1018
APLLCAGVTVYSPLKHF
Sbjct: 535 APLLCAGVTVYSPLKHF 585
Score = 133 bits (286), Expect(3) = 3e-092
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +1
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 73 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 252
Query: 1350 M 1348
M
Sbjct: 253 M 255
Score = 116 bits (249), Expect(3) = 1e-040
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -3
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 354 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 175
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 174 HHIFRAC 154
Score = 106 bits (227), Expect(3) = 7e-042
Identities = 51/81 (62%), Positives = 56/81 (69%)
Frame = -1 / +3
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 1070
VLPR+ +QG+R AVLQQEDLV+QRRLH A A +RL HGRR EV GEDP
Sbjct: 354 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADARRLRLRHGRRSEVRGEDPRRACAGAG 533
Query: 1069 XXXAVRWRDGVQPAEALWADD 1007
AVR RDGVQPAEAL ADD
Sbjct: 534 GAAAVRGRDGVQPAEALLADD 596
Score = 72.5 bits (152), Expect(3) = 7e-042
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +3
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 147 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 266
Score = 59.3 bits (123), Expect(3) = 1e-040
Identities = 29/72 (40%), Positives = 33/72 (45%)
Frame = +3 / -2
Query: 1035 CTPSRQRTXXXXXXXXXXXXGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXXAQ 1214
CTPSR RT GSSP+TS RRPW RR A A + A+
Sbjct: 568 CTPSRPRTAAAPPAPAQARRGSSPRTSDRRPWRRRSRLASACRRCRRRCTTRSSCCSTAR 389
Query: 1215 RWPCRGCTRGST 1250
R PC +RGST
Sbjct: 388 RSPCTAGSRGST 353
Score = 53.3 bits (110), Expect(3) = 3e-092
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = -2 / +3
Query: 951 KVAKAMGHHVTVISSSSKKRAEAMDHLGADAYL 853
+V K+MGHHVTVISS +KK A A+ HLGA YL
Sbjct: 651 EVGKSMGHHVTVISSFNKKPARALGHLGAHQYL 749
Score = 47.8 bits (98), Expect(2) = 1e-080
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = +2 / -2
Query: 848 LTRYASAPRWSIASARFLDDELITVTWWPMALAT 949
L RY APRW A A FL +ELITVTW PM L T
Sbjct: 754 LRRYWWAPRWPRARAGFLLNELITVTWCPMDLPT 653
Score = 30.9 bits (61), Expect(3) = 7e-042
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / +2
Query: 943 QGHGPPRDGDQLVVQE 896
Q HG PRDGDQLV Q+
Sbjct: 659 QIHGAPRDGDQLVQQK 706
Score = 29.9 bits (59), Expect(3) = 1e-040
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1 / -1
Query: 907 RADHRHVVAHGLGY 948
RADHRHVV HG +
Sbjct: 695 RADHRHVVPHGFAH 654
>gb|BE194442.1|BE194442 HVSMEh0085I24f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0085I24f, mRNA sequence
Length = 860
Score = 182 bits (391), Expect(2) = 5e-088
Identities = 71/75 (94%), Positives = 72/75 (96%)
Frame = -2 / +1
Query: 1242 RECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAP 1063
R+C PCKANVEQYCN KIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQAAP
Sbjct: 1 RDCRPCKANVEQYCNNKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAP 180
Query: 1062 LLCAGVTVYSPLKHF 1018
LLCAGVTVYSPLKHF
Sbjct: 181 LLCAGVTVYSPLKHF 225
Score = 164 bits (352), Expect(2) = 5e-088
Identities = 78/132 (59%), Positives = 87/132 (65%)
Frame = -2 / +1
Query: 954 VKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXDYIIDTVPVHH 775
VKVAK+MGHHVTVISSS+KKRAEA+D LGAD YLV DYIIDTVPV H
Sbjct: 289 VKVAKSMGHHVTVISSSNKKRAEAVDDLGADEYLVSSDADQMAAAADSLDYIIDTVPVKH 468
Query: 774 PLEPYXXXXXXXXXXXXXXVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDK 595
PLEPY VI EPL+FVSPM MLGRK ITGSF+GS+DET E +F ++
Sbjct: 469 PLEPYLALLKMDGKLVLMGVIAEPLNFVSPMGMLGRKTITGSFLGSLDETEEGPKFWFEQ 648
Query: 594 GLTSQIEVVKMG 559
G T Q VK G
Sbjct: 649 GATLQNGGVKNG 684
Score = 163 bits (351), Expect(2) = 1e-072
Identities = 68/79 (86%), Positives = 69/79 (87%)
Frame = +2 / -1
Query: 1004 GVVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 1183
GV+SPKCFSGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLY
Sbjct: 239 GVISPKCFSGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLY 60
Query: 1184 DQIFLLQYCSTLALQGLHS 1240
DQI LLQYCST AL G S
Sbjct: 59 DQILLLQYCSTFALHGRQS 3
Score = 131 bits (280), Expect(2) = 1e-072
Identities = 64/131 (48%), Positives = 69/131 (52%)
Frame = +2 / -1
Query: 560 PILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRGXXXXXXXXXXX 739
P LT +V+P S QN S+VSS LP KLPVM F PSI +GDTKL G
Sbjct: 683 PFLTPPFCKVAPCSNQNLGPSSVSSRLPRKLPVMVFLPSIPIGDTKLSGSAITPISTSLP 504
Query: 740 XXXXXXXXXXXGWCTGTVXXXXXXXXXXXXXXXXXXLTRYASAPRWSIASARFLDDELIT 919
G TGTV LTRY+SAPR S ASARFL DELIT
Sbjct: 503 SILSSAR*GSSGCFTGTVSMM*SSESAAAAIWSASELTRYSSAPRSSTASARFLLDELIT 324
Query: 920 VTWWPMALATF 952
VTWWPM LATF
Sbjct: 323 VTWWPMDLATF 291
Score = 99.1 bits (210), Expect(2) = 1e-025
Identities = 48/78 (61%), Positives = 53/78 (67%)
Frame = -1 / +3
Query: 1240 RVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXXXXX 1061
R+ +QG+R AVLQQ DLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 3 RLPAVQGERRAVLQQ*DLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPRRACAGAGGAA 182
Query: 1060 AVRWRDGVQPAEALWADD 1007
AVR RDGVQPAEAL ADD
Sbjct: 183 AVRGRDGVQPAEALRADD 236
Score = 71.2 bits (149), Expect(3) = 1e-029
Identities = 30/51 (58%), Positives = 34/51 (66%)
Frame = +1 / -3
Query: 586 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGLADDAQQHELA 738
G PL EL+ L LV A ++APRDGLPPQH H HE + L D A QHELA
Sbjct: 657 GSPLFKPELRTLLRLVQAPEKAPRDGLPPQHPHWGHEVERLRDHAHQHELA 505
Score = 56.5 bits (117), Expect(3) = 1e-029
Identities = 27/69 (39%), Positives = 31/69 (44%)
Frame = +3 / -2
Query: 1035 CTPSRQRTXXXXXXXXXXXXGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXXAQ 1214
CTPSR RT GSSP+TS RRPW RR PA A + A+
Sbjct: 208 CTPSRPRTAAAPPAPAQARRGSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSYCCSTAR 29
Query: 1215 RWPCRGCTR 1241
R PC +R
Sbjct: 28 RSPCTAGSR 2
Score = 47.3 bits (97), Expect(3) = 1e-029
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = +1 / -3
Query: 886 LRALLGRRADHRHVVAHGLGYLXXXXXXXXXXXXXXXXXRGRQPKVL 1026
L LL RADHRHVVAHGLG+L G QP+VL
Sbjct: 357 LGPLLVGRADHRHVVAHGLGHLHAHVAHAAQAQDPAAEAGGHQPEVL 217
Score = 38.6 bits (78), Expect(2) = 1e-025
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1 / +3
Query: 943 QGHGPPRDGDQLVVQEA 893
Q HGPPRDGDQLV QEA
Sbjct: 300 QVHGPPRDGDQLVQQEA 350
>gb|BI957446.1|BI957446 HVSMEn0009J16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0009J16f, mRNA sequence
Length = 646
Score = 231 bits (499), Expect(2) = 8e-086
Identities = 105/147 (71%), Positives = 111/147 (75%)
Frame = -2 / +2
Query: 954 VKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXDYIIDTVPVHH 775
VKVAK+MGHHVTVISSS+KKRAEA+D LGAD YLV DYIIDTVPV H
Sbjct: 203 VKVAKSMGHHVTVISSSNKKRAEAVDDLGADEYLVSSDADQMAAAADSLDYIIDTVPVKH 382
Query: 774 PLEPYXXXXXXXXXXXXXXVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDK 595
PLEPY VI EPLSFVSPMVMLGRK ITGSFIGS+DET EVL+FCVDK
Sbjct: 383 PLEPYLALLKMDGKLVLMGVIAEPLSFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDK 562
Query: 594 GLTSQIEVVKMGYVNEALERLERNDVR 514
GLTSQIEVVKM YVN ALE+LERNDVR
Sbjct: 563 GLTSQIEVVKMDYVNXALEKLERNDVR 643
Score = 155 bits (332), Expect(2) = 1e-065
Identities = 75/130 (57%), Positives = 78/130 (60%)
Frame = +2 / -2
Query: 563 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRGXXXXXXXXXXXX 742
ILTTSI EVSPLSTQN TS+VSSMLPMKLPVM F PSIT+GDTKL G
Sbjct: 594 ILTTSICEVSPLSTQNLRTSSVSSMLPMKLPVMVFLPSITIGDTKLSGSAITPISTSLPS 415
Query: 743 XXXXXXXXXXGWCTGTVXXXXXXXXXXXXXXXXXXLTRYASAPRWSIASARFLDDELITV 922
G TGTV LTRY+SAPR S ASARFL DELITV
Sbjct: 414 ILSSAR*GSSGCFTGTVSMM*SSESAAAAIWSASELTRYSSAPRSSTASARFLLDELITV 235
Query: 923 TWWPMALATF 952
TWWPM LATF
Sbjct: 234 TWWPMDLATF 205
Score = 116 bits (248), Expect(2) = 1e-065
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = +2 / -2
Query: 1004 GVVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVG 1156
GV+SPKCFSGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG
Sbjct: 153 GVISPKCFSGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVG 1
Score = 107 bits (228), Expect(2) = 8e-086
Identities = 44/46 (95%), Positives = 44/46 (95%)
Frame = -2 / +2
Query: 1155 PTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHF 1018
PT GGFAS MVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHF
Sbjct: 2 PTHGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHF 139
Score = 90.9 bits (192), Expect(3) = 1e-032
Identities = 38/51 (74%), Positives = 40/51 (78%)
Frame = +1 / -1
Query: 586 GEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGLADDAQQHELA 738
GEPLVDAEL+ L LV A DEAPRDGLPPQHHH HEA+ L D A QHELA
Sbjct: 571 GEPLVDAELEDLLRLVHAPDEAPRDGLPPQHHHWGHEAERLRDHAHQHELA 419
Score = 62.0 bits (129), Expect(3) = 2e-021
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = -1 / +1
Query: 1156 AHAGWIRLHHGRRPEVCGEDPXXXXXXXXXXXAVRWRDGVQPAEALWADD 1007
A A +RL HGRR EV GEDP AVR RDGVQPAEAL ADD
Sbjct: 1 ADARRLRLRHGRRSEVRGEDPRRACAGAGGAAAVRGRDGVQPAEALRADD 150
Score = 47.3 bits (97), Expect(3) = 1e-032
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = +1 / -1
Query: 886 LRALLGRRADHRHVVAHGLGYLXXXXXXXXXXXXXXXXXRGRQPKVL 1026
L LL RADHRHVVAHGLG+L G QP+VL
Sbjct: 271 LGPLLVGRADHRHVVAHGLGHLHAHVAHAAQAQDPAAEAGGHQPEVL 131
Score = 46.4 bits (95), Expect(3) = 1e-032
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = +3 / -3
Query: 1035 CTPSRQRTXXXXXXXXXXXXGSSPQTSGRRPWWRR 1139
CTPSR RT GSSP+TS RRPW RR
Sbjct: 122 CTPSRPRTAAAPPAPAQARRGSSPRTSDRRPWRRR 18
Score = 45.5 bits (93), Expect(3) = 2e-021
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = -1 / +1
Query: 643 RQHRRDR*GASVLRRQGAHLPDRGGQD 563
R+H RD G VLRRQGAHL DRG QD
Sbjct: 514 REHGRDGGGPQVLRRQGAHLADRGRQD 594
Score = 38.6 bits (78), Expect(3) = 2e-021
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1 / +1
Query: 943 QGHGPPRDGDQLVVQEA 893
Q HGPPRDGDQLV QEA
Sbjct: 214 QVHGPPRDGDQLVQQEA 264
>gb|BU995195.1|BU995195 HM09I05r HM Hordeum vulgare subsp. vulgare cDNA clone HM09I05
5-PRIME, mRNA sequence
Length = 622
Score = 277 bits (600), Expect = 1e-073
Identities = 120/176 (68%), Positives = 125/176 (71%)
Frame = +2 / -1
Query: 1004 GVVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 1183
GV+SPKCFSGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLY
Sbjct: 577 GVISPKCFSGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLY 398
Query: 1184 DQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXXYLAXXXXXXXXXXXXXXXXXIGYFE 1363
DQIFLLQYCST AL G SRQH YL +GY E
Sbjct: 397 DQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLE 218
Query: 1364 APRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 1531
APR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 217 APRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 50
Score = 192 bits (414), Expect(2) = 4e-082
Identities = 74/77 (96%), Positives = 75/77 (97%)
Frame = -2 / +3
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 1069
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQA
Sbjct: 333 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQA 512
Query: 1068 APLLCAGVTVYSPLKHF 1018
APLLCAGVTVYSPLKHF
Sbjct: 513 APLLCAGVTVYSPLKHF 563
Score = 133 bits (286), Expect(2) = 4e-082
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +3
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 51 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 230
Query: 1350 M 1348
M
Sbjct: 231 M 233
Score = 116 bits (249), Expect(2) = 2e-038
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -3
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 332 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 153
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 152 HHIFRAC 132
Score = 110 bits (234), Expect(2) = 5e-039
Identities = 52/81 (64%), Positives = 57/81 (70%)
Frame = -1 / +2
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 1070
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 332 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPRRACAGAG 511
Query: 1069 XXXAVRWRDGVQPAEALWADD 1007
AVR RDGVQPAEAL ADD
Sbjct: 512 GAAAVRGRDGVQPAEALRADD 574
Score = 72.5 bits (152), Expect(2) = 5e-039
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +2
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 125 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 244
Score = 63.8 bits (133), Expect(2) = 2e-038
Identities = 30/72 (41%), Positives = 34/72 (47%)
Frame = +3 / -2
Query: 1035 CTPSRQRTXXXXXXXXXXXXGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXXAQ 1214
CTPSR RT GSSP+TS RRPW RR PA A + A+
Sbjct: 546 CTPSRPRTAAAPPAPAQARRGSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTAR 367
Query: 1215 RWPCRGCTRGST 1250
R PC +RGST
Sbjct: 366 RSPCTAGSRGST 331
>gb|BE216591.1|BE216591 HV_CEb0010O10f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010O10f, mRNA sequence
Length = 740
Score = 270 bits (583), Expect = 2e-071
Identities = 117/176 (66%), Positives = 124/176 (70%)
Frame = +2 / -2
Query: 1004 GVVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 1183
GV+S KCF+GLYTVTPAHSSGAACSGA PAGIF+TNF STTM EA PPCVG PSV*TSLY
Sbjct: 613 GVISLKCFNGLYTVTPAHSSGAACSGASPAGIFSTNF*STTMAEAKPPCVGLPSV*TSLY 434
Query: 1184 DQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXXYLAXXXXXXXXXXXXXXXXXIGYFE 1363
DQIFLLQYCST AL G SRQH YL +GY E
Sbjct: 433 DQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLE 254
Query: 1364 APRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 1531
APR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 253 APRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 86
Score = 187 bits (402), Expect(2) = 2e-080
Identities = 72/76 (94%), Positives = 73/76 (96%)
Frame = -2 / +3
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 1069
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFV KIPAGLAPEQA
Sbjct: 369 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVEKIPAGLAPEQA 548
Query: 1068 APLLCAGVTVYSPLKH 1021
APLLCAGVTVYSPLKH
Sbjct: 549 APLLCAGVTVYSPLKH 596
Score = 133 bits (286), Expect(2) = 2e-080
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +3
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 87 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 266
Query: 1350 M 1348
M
Sbjct: 267 M 269
Score = 116 bits (249), Expect(2) = 2e-038
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -1
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 368 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 189
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 188 HHIFRAC 168
Score = 108 bits (230), Expect(2) = 2e-038
Identities = 51/81 (62%), Positives = 56/81 (69%)
Frame = -1 / +2
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 1070
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 368 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPRRACAGAG 547
Query: 1069 XXXAVRWRDGVQPAEALWADD 1007
AVR RDGVQP EAL ADD
Sbjct: 548 GAAAVRGRDGVQPVEALEADD 610
Score = 72.5 bits (152), Expect(2) = 2e-038
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +2
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 161 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 280
Score = 63.8 bits (133), Expect(2) = 2e-038
Identities = 30/72 (41%), Positives = 34/72 (47%)
Frame = +3 / -3
Query: 1035 CTPSRQRTXXXXXXXXXXXXGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXXAQ 1214
CTPSR RT GSSP+TS RRPW RR PA A + A+
Sbjct: 582 CTPSRPRTAAAPPAPAQARRGSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTAR 403
Query: 1215 RWPCRGCTRGST 1250
R PC +RGST
Sbjct: 402 RSPCTAGSRGST 367
>gb|BQ763191.1|BQ763191 EBro02_SQ007_C15_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_C15 5', mRNA sequence
Length = 578
Score = 258 bits (557), Expect = 8e-068
Identities = 113/168 (67%), Positives = 117/168 (69%)
Frame = +2 / -3
Query: 1028 SGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQY 1207
SGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLYDQIFLLQY
Sbjct: 576 SGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLYDQIFLLQY 397
Query: 1208 CSTLALQGLHSRQHXXXXXXXXXXXXXYLAXXXXXXXXXXXXXXXXXIGYFEAPRWFLAW 1387
CST AL G SRQH YL +GY EAPR FL W
Sbjct: 396 CSTFALHGRQSRQHPTITPTPTTSLTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFLTW 217
Query: 1388 WMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 1531
WMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 216 WMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 73
Score = 184 bits (396), Expect(2) = 1e-079
Identities = 74/90 (82%), Positives = 76/90 (84%)
Frame = -2 / +2
Query: 1296 AKYXXXXXXXXXXXXGCCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVD 1117
+KY GCCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVD
Sbjct: 308 SKYRVSDVVGVGVIVGCCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVD 487
Query: 1116 QKFVVKIPAGLAPEQAAPLLCAGVTVYSPL 1027
QKFVVKIPAGLAPEQAAPLLCAGVTVYSPL
Sbjct: 488 QKFVVKIPAGLAPEQAAPLLCAGVTVYSPL 577
Score = 133 bits (286), Expect(2) = 1e-079
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +2
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 74 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 253
Query: 1350 M 1348
M
Sbjct: 254 M 256
Score = 116 bits (249), Expect(2) = 2e-038
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -2
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 355 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 176
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 175 HHIFRAC 155
Score = 98.2 bits (208), Expect(2) = 2e-035
Identities = 46/74 (62%), Positives = 51/74 (68%)
Frame = -1 / +1
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 1070
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 355 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPRRACAGAG 534
Query: 1069 XXXAVRWRDGVQPA 1028
AVR RDGVQPA
Sbjct: 535 GAAAVRGRDGVQPA 576
Score = 72.5 bits (152), Expect(2) = 2e-035
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +1
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 148 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 267
Score = 63.8 bits (133), Expect(2) = 2e-038
Identities = 30/72 (41%), Positives = 34/72 (47%)
Frame = +3 / -1
Query: 1035 CTPSRQRTXXXXXXXXXXXXGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXXAQ 1214
CTPSR RT GSSP+TS RRPW RR PA A + A+
Sbjct: 569 CTPSRPRTAAAPPAPAQARRGSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTAR 390
Query: 1215 RWPCRGCTRGST 1250
R PC +RGST
Sbjct: 389 RSPCTAGSRGST 354
>gb|BE214468.1|BE214468 HV_CEb0003I17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003I17f, mRNA sequence
Length = 723
Score = 234 bits (505), Expect(2) = 5e-063
Identities = 103/161 (63%), Positives = 107/161 (66%)
Frame = +2 / -1
Query: 1049 PAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQ 1228
PAHS GAACSGA PAGIFT NF ST M EA PPCVG PSV*TSLYDQIFLLQYCST AL
Sbjct: 558 PAHSRGAACSGASPAGIFTPNF*STAMAEAKPPCVGLPSV*TSLYDQIFLLQYCSTFALH 379
Query: 1229 GLHSRQHXXXXXXXXXXXXXYLAXXXXXXXXXXXXXXXXXIGYFEAPRWFLAWWMSVWQI 1408
G SRQH YL +GY EAPR FL WWMSVWQ+
Sbjct: 378 GRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFLTWWMSVWQM 199
Query: 1409 PQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 1531
PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 198 PQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 76
Score = 162 bits (349), Expect(4) = 6e-079
Identities = 62/67 (92%), Positives = 63/67 (94%)
Frame = -2 / +2
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 1069
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS M VDQKF VKIPAGLAPEQA
Sbjct: 359 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMAVDQKFGVKIPAGLAPEQA 538
Query: 1068 APLLCAG 1048
APLLCAG
Sbjct: 539 APLLCAG 559
Score = 133 bits (286), Expect(4) = 6e-079
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +2
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 77 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 256
Query: 1350 M 1348
M
Sbjct: 257 M 259
Score = 116 bits (249), Expect(4) = 1e-041
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -3
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 358 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 179
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 178 HHIFRAC 158
Score = 78.0 bits (164), Expect(2) = 2e-029
Identities = 38/66 (57%), Positives = 43/66 (65%)
Frame = -1 / +1
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 1070
VLPR+ +QG+R AVLQQEDLV+QRRLH A A +RL HGRR EV GEDP
Sbjct: 358 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADARRLRLRHGRRSEVRGEDPRRACAGAS 537
Query: 1069 XXXAVR 1052
AVR
Sbjct: 538 GAPAVR 555
Score = 72.5 bits (152), Expect(2) = 2e-029
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +1
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 151 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 270
Score = 41.4 bits (84), Expect(4) = 1e-041
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +2 / -3
Query: 1004 GVVSPKCFSGLYTVTPAHSSGAACSGARPAG 1096
GV SPKCFSGLYTVT G +P G
Sbjct: 604 GVFSPKCFSGLYTVTARAQQGRRLLRRKPGG 512
Score = 40.9 bits (83), Expect(4) = 1e-041
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1 / -3
Query: 1096 DLHHKLLVDDHGGGESTLRGPSI 1164
DLH +LL+D HGGGE+ LR P++
Sbjct: 511 DLHPELLIDGHGGGEAALRRPAV 443
Score = 29.9 bits (59), Expect(4) = 6e-079
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1 / +2
Query: 1048 RDGVQPAEALWADD 1007
RDGVQPAEAL A+D
Sbjct: 560 RDGVQPAEALRAED 601
Score = 28.6 bits (56), Expect(2) = 5e-063
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 896 FLDDELITVTWWPMALATF 952
F ++LI V+ WPM LATF
Sbjct: 712 FFLEKLIPVSGWPMELATF 656
Score = 27.6 bits (54), Expect(4) = 1e-041
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +1 / -2
Query: 907 RADHRHVVAHGLGYLXXXXXXXXXXXXXXXXXRGRQPKVL 1026
+AD R +AHG+G+ G QP+VL
Sbjct: 701 KADPRQWLAHGIGHFQAHVAHAAQAQDPAAEAGGLQPEVL 582
Score = 26.7 bits (52), Expect(4) = 6e-079
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / +2
Query: 943 QGHGPPRDGDQLVVQEA 893
Q HGP DGDQL +E+
Sbjct: 665 QFHGPTTDGDQLFQKES 715
>gb|AL507638.1|AL507638 AL507638 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06G20V 5',
mRNA sequence
Length = 699
Score = 234 bits (506), Expect(2) = 2e-061
Identities = 104/161 (64%), Positives = 108/161 (67%)
Frame = +2 / -2
Query: 1049 PAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQ 1228
P SSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLYDQIFLLQYCST AL
Sbjct: 563 PRTSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLYDQIFLLQYCSTFALH 384
Query: 1229 GLHSRQHXXXXXXXXXXXXXYLAXXXXXXXXXXXXXXXXXIGYFEAPRWFLAWWMSVWQI 1408
G SRQH YL +GY EAPR FL WWMSVWQ+
Sbjct: 383 GRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFLTWWMSVWQM 204
Query: 1409 PQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 1531
PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 203 PQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 81
Score = 160 bits (345), Expect(3) = 7e-074
Identities = 62/67 (92%), Positives = 63/67 (94%)
Frame = -2 / +1
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 1069
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQA
Sbjct: 364 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQA 543
Query: 1068 APLLCAG 1048
APLL G
Sbjct: 544 APLLVRG 564
Score = 133 bits (286), Expect(3) = 7e-074
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +1
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 82 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 261
Query: 1350 M 1348
M
Sbjct: 262 M 264
Score = 116 bits (249), Expect(3) = 6e-038
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -1
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 363 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 184
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 183 HHIFRAC 163
Score = 81.3 bits (171), Expect(3) = 3e-035
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = -1 / +3
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDP 1094
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 363 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDP 518
Score = 72.5 bits (152), Expect(3) = 3e-035
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +3
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 156 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 275
Score = 50.1 bits (103), Expect(3) = 6e-038
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = +3 / -3
Query: 1095 GSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXXAQRWPCRGCTRGST 1250
GSSP+TS RRPW RR PA A + A+R PC +RGST
Sbjct: 517 GSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTARRSPCTAGSRGST 362
Score = 34.1 bits (68), Expect(3) = 3e-035
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / +2
Query: 1095 PAGLAPEQAAPLLCAGVTVYSPLK 1024
P GL + LCAGVTVYSPL+
Sbjct: 518 PPGLRRSRRRRCLCAGVTVYSPLE 589
Score = 29.9 bits (59), Expect(3) = 6e-038
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2 / -1
Query: 1028 SGLYTVTPAHSSGAACSGARPAG 1096
SGLYTVTPAH +P G
Sbjct: 585 SGLYTVTPAHKQRRRLLRRKPGG 517
Score = 23.1 bits (44), Expect(3) = 7e-074
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +1
Query: 1057 VRWRDGVQPA 1028
VR RDGVQPA
Sbjct: 556 VRGRDGVQPA 585
Score = 23.1 bits (44), Expect(2) = 2e-061
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2 / -3
Query: 1004 GVVSPKCF 1027
GV+SPKCF
Sbjct: 610 GVISPKCF 587
>gb|BQ469466.1|BQ469466 HM04O09r HM Hordeum vulgare subsp. vulgare cDNA clone HM04O09
5-PRIME, mRNA sequence
Length = 554
Score = 236 bits (510), Expect = 3e-061
Identities = 104/159 (65%), Positives = 108/159 (67%)
Frame = +2 / -2
Query: 1055 HSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGL 1234
HSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLYDQIFLLQYCST AL G
Sbjct: 553 HSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLYDQIFLLQYCSTFALHGR 374
Query: 1235 HSRQHXXXXXXXXXXXXXYLAXXXXXXXXXXXXXXXXXIGYFEAPRWFLAWWMSVWQIPQ 1414
SRQH YL +GY EAPR FL WWMSVWQ+PQ
Sbjct: 373 QSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQ 194
Query: 1415 *STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 1531
TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 193 YLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 77
Score = 163 bits (350), Expect(2) = 3e-073
Identities = 62/65 (95%), Positives = 63/65 (96%)
Frame = -2 / +3
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 1069
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQA
Sbjct: 360 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQA 539
Query: 1068 APLLC 1054
APLLC
Sbjct: 540 APLLC 554
Score = 133 bits (286), Expect(2) = 3e-073
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +3
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 78 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 257
Query: 1350 M 1348
M
Sbjct: 258 M 260
Score = 116 bits (249), Expect(2) = 2e-034
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -1
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 359 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 180
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 179 HHIFRAC 159
Score = 81.3 bits (171), Expect(2) = 2e-030
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = -1 / +2
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDP 1094
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 359 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDP 514
Score = 72.5 bits (152), Expect(2) = 2e-030
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +2
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 152 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 271
Score = 50.1 bits (103), Expect(2) = 2e-034
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = +3 / -3
Query: 1095 GSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXXAQRWPCRGCTRGST 1250
GSSP+TS RRPW RR PA A + A+R PC +RGST
Sbjct: 513 GSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTARRSPCTAGSRGST 358
>gb|BE455755.3|BE455755 HVSMEg0019K10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019K10f, mRNA sequence
Length = 837
Score = 238 bits (514), Expect(2) = 5e-063
Identities = 106/176 (60%), Positives = 112/176 (63%)
Frame = +2 / -2
Query: 1004 GVVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 1183
G + C GLY PAHSSGAACSG GIFTTNF STTM EA PPCVG PSV*TSLY
Sbjct: 602 GSSAKSCSRGLYPSRPAHSSGAACSGESRRGIFTTNF*STTMAEAKPPCVGLPSV*TSLY 423
Query: 1184 DQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXXYLAXXXXXXXXXXXXXXXXXIGYFE 1363
DQIFLLQYCST AL G SRQH YL +GY E
Sbjct: 422 DQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCLGTMGYLE 243
Query: 1364 APRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 1531
APR FL WWMSVWQ+PQ TF TT SGPVFLRV *G+R PVASLAAHP T +S+A
Sbjct: 242 APRSFLTWWMSVWQMPQYLTFNTTFSGPVFLRVYV*GKRWPVASLAAHPVTVVSEA 75
Score = 166 bits (357), Expect(2) = 9e-073
Identities = 64/75 (85%), Positives = 68/75 (90%)
Frame = -2 / +1
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 1069
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIP L+PEQA
Sbjct: 358 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPRRLSPEQA 537
Query: 1068 APLLCAGVTVYSPLK 1024
APLLCAG Y+PL+
Sbjct: 538 APLLCAGRDGYNPLE 582
Score = 128 bits (275), Expect(2) = 9e-073
Identities = 50/61 (81%), Positives = 53/61 (86%)
Frame = -2 / +1
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHL PY+YTLR TGPE+VV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 76 ASETTVTGWAARDATGHLFPYTYTLRKTGPENVVLKVKYCGICHTDIHQVKNDLGASKYP 255
Query: 1350 M 1348
M
Sbjct: 256 M 258
Score = 116 bits (249), Expect(2) = 9e-036
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -1
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 357 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 178
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 177 HHIFRAC 157
Score = 84.9 bits (179), Expect(2) = 4e-031
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = -1 / +3
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 1070
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 357 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPPPAFAGAS 536
Query: 1069 XXXAVRWRDGVQP 1031
AVR VQP
Sbjct: 537 GAAAVRGP*RVQP 575
Score = 71.2 bits (149), Expect(2) = 4e-031
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = -1 / +3
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*+CG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 150 QENRP*KCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPKA 269
Score = 54.7 bits (113), Expect(2) = 9e-036
Identities = 27/72 (37%), Positives = 31/72 (43%)
Frame = +3 / -3
Query: 1035 CTPSRQRTXXXXXXXXXXXXGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXXAQ 1214
CT RT GSSP+TS RRPW RR PA A + A+
Sbjct: 571 CTRHGPRTAAAPLAPAKAGGGSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTAR 392
Query: 1215 RWPCRGCTRGST 1250
R PC +RGST
Sbjct: 391 RSPCTAGSRGST 356
Score = 24.4 bits (47), Expect(2) = 5e-063
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2 / -3
Query: 848 LTRYASAPRWSIASARFLDDELITVTWWPMALATF 952
LTR+ A S A L +LI W LATF
Sbjct: 760 LTRFLLAASLSTALGPLLFGQLIPRHVWAQGLATF 656
>gb|BF260353.3|BF260353 HVSMEf0021M09f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0021M09f, mRNA sequence
Length = 539
Score = 232 bits (501), Expect = 4e-060
Identities = 103/159 (64%), Positives = 107/159 (67%)
Frame = +2 / -1
Query: 1055 HSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGL 1234
HSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLYDQIFLLQYCST AL G
Sbjct: 536 HSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLYDQIFLLQYCSTFALHGR 357
Query: 1235 HSRQHXXXXXXXXXXXXXYLAXXXXXXXXXXXXXXXXXIGYFEAPRWFLAWWMSVWQIPQ 1414
SRQH YL +GY EA R FL WWMSVWQ+PQ
Sbjct: 356 QSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAXRSFLTWWMSVWQMPQ 177
Query: 1415 *STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 1531
TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 176 YLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 60
Score = 163 bits (350), Expect(2) = 2e-072
Identities = 62/65 (95%), Positives = 63/65 (96%)
Frame = -2 / +1
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 1069
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQA
Sbjct: 343 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQA 522
Query: 1068 APLLC 1054
APLLC
Sbjct: 523 APLLC 537
Score = 130 bits (279), Expect(2) = 2e-072
Identities = 51/61 (83%), Positives = 53/61 (86%)
Frame = -2 / +1
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN L ASKYP
Sbjct: 61 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLXASKYP 240
Query: 1350 M 1348
M
Sbjct: 241 M 243
Score = 116 bits (249), Expect(2) = 1e-034
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -3
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 342 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 163
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 162 HHIFRAC 142
Score = 82.2 bits (173), Expect(2) = 7e-031
Identities = 39/66 (59%), Positives = 44/66 (66%)
Frame = -1 / +3
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 1070
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 342 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPRRACAGAG 521
Query: 1069 XXXAVR 1052
AVR
Sbjct: 522 GAAAVR 539
Score = 73.0 bits (153), Expect(2) = 7e-031
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +3
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 135 QENRP*RCGVEG*ILRHLPHGHPPGQERPXCFQVSHGPRA 254
Score = 50.6 bits (104), Expect(2) = 1e-034
Identities = 25/66 (37%), Positives = 29/66 (43%)
Frame = +3 / -2
Query: 1053 RTXXXXXXXXXXXXGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXXAQRWPCRG 1232
RT GSSP+TS RRPW RR PA A + A+R PC
Sbjct: 538 RTAAAPPAPAQARRGSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTARRSPCTA 359
Query: 1233 CTRGST 1250
+RGST
Sbjct: 358 GSRGST 341
>gb|BQ467847.1|BQ467847 HR01B24r HR Hordeum vulgare subsp. vulgare cDNA clone HR01B24
5-PRIME, mRNA sequence
Length = 558
Score = 232 bits (502), Expect = 3e-060
Identities = 103/158 (65%), Positives = 107/158 (67%)
Frame = +2 / -1
Query: 1058 SSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLH 1237
SSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLYDQIFLLQYCST AL G
Sbjct: 558 SSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLYDQIFLLQYCSTFALHGRQ 379
Query: 1238 SRQHXXXXXXXXXXXXXYLAXXXXXXXXXXXXXXXXXIGYFEAPRWFLAWWMSVWQIPQ* 1417
SRQH YL +GY EAPR FL WWMSVWQ+PQ
Sbjct: 378 SRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQY 199
Query: 1418 STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 1531
TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 198 LTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 85
Score = 157 bits (337), Expect(2) = 2e-071
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = -2 / +2
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 1069
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQA
Sbjct: 368 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQA 547
Query: 1068 APL 1060
APL
Sbjct: 548 APL 556
Score = 133 bits (286), Expect(2) = 2e-071
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +2
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 86 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 265
Query: 1350 M 1348
M
Sbjct: 266 M 268
Score = 116 bits (249), Expect(2) = 2e-034
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -3
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 367 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 188
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 187 HHIFRAC 167
Score = 81.3 bits (171), Expect(2) = 2e-030
Identities = 36/52 (69%), Positives = 41/52 (78%)
Frame = -1 / +1
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDP 1094
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 367 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDP 522
Score = 72.5 bits (152), Expect(2) = 2e-030
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +1
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 160 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 279
Score = 50.1 bits (103), Expect(2) = 2e-034
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = +3 / -2
Query: 1095 GSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXXAQRWPCRGCTRGST 1250
GSSP+TS RRPW RR PA A + A+R PC +RGST
Sbjct: 521 GSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTARRSPCTAGSRGST 366
>gb|BI958350.1|BI958350 HVSMEn0014I18f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0014I18f,
mRNA sequence
Length = 671
Score = 211 bits (455), Expect = 1e-053
Identities = 97/172 (56%), Positives = 104/172 (60%)
Frame = +2 / -1
Query: 1016 PKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIF 1195
P + +V P + G A SGA PAGI NF S TM EA PPCVG PSV* SLYDQIF
Sbjct: 593 PYPLHXMNSVIPPLTIGPAXSGASPAGILPANF*SRTMAEAKPPCVGLPSV*MSLYDQIF 414
Query: 1196 LLQYCSTLALQGLHSRQHXXXXXXXXXXXXXYLAXXXXXXXXXXXXXXXXXIGYFEAPRW 1375
LLQYCST AL G SRQH YL +GY EAPR
Sbjct: 413 LLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLEAPRS 234
Query: 1376 FLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFLSDA 1531
FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLAAHP T +S+A
Sbjct: 233 FLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVVSEA 78
Score = 151 bits (325), Expect(2) = 7e-070
Identities = 55/71 (77%), Positives = 62/71 (87%)
Frame = -2 / +1
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 1069
CCR+C PCKANVEQYCNKKIWSYND+YTDGRPTQGGFAS MV+DQKF KIPAGLAPE A
Sbjct: 361 CCRDCRPCKANVEQYCNKKIWSYNDIYTDGRPTQGGFASAMVLDQKFAGKIPAGLAPEXA 540
Query: 1068 APLLCAGVTVY 1036
P++ G+T +
Sbjct: 541 GPMVSGGITEF 573
Score = 133 bits (286), Expect(2) = 7e-070
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +1
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 79 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 258
Query: 1350 M 1348
M
Sbjct: 259 M 261
Score = 116 bits (249), Expect(2) = 8e-032
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -3
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 360 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 181
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 180 HHIFRAC 160
Score = 72.5 bits (152), Expect(2) = 2e-026
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +3
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 153 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 272
Score = 68.0 bits (142), Expect(2) = 2e-026
Identities = 32/52 (61%), Positives = 37/52 (71%)
Frame = -1 / +3
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDP 1094
VLPR+ +QG+R AVLQQEDLV+QR LH A AG +RL HG R EV DP
Sbjct: 360 VLPRLPAVQGERRAVLQQEDLVVQRHLHRRQADAGRLRLRHGPRSEVRW*DP 515
Score = 41.4 bits (84), Expect(2) = 8e-032
Identities = 23/71 (32%), Positives = 29/71 (40%)
Frame = +3 / -2
Query: 1038 TPSRQRTXXXXXXXXXXXXGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXXAQR 1217
TP +R+ GS +TS R PW RR PA A + A+R
Sbjct: 571 TPLFRRSPSAPPVQAQARRGSYQRTSDRGPWRRRSRPASACRRCRCRCTTRSSCCSTARR 392
Query: 1218 WPCRGCTRGST 1250
PC +RGST
Sbjct: 391 SPCTAGSRGST 359
>gb|BQ660971.1|BQ660971 HM01F04w HM Hordeum vulgare subsp. vulgare cDNA clone HM01F04
3-PRIME, mRNA sequence
Length = 600
Score = 260 bits (562), Expect = 2e-068
Identities = 117/159 (73%), Positives = 124/159 (77%)
Frame = -2 / -2
Query: 954 VKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXDYIIDTVPVHH 775
VKVAK+MGHHVTVISSS+KKRAEA+D LGAD YLV DYIIDTVPV H
Sbjct: 590 VKVAKSMGHHVTVISSSNKKRAEAVDDLGADEYLVSSDADQMAAAADSLDYIIDTVPVKH 411
Query: 774 PLEPYXXXXXXXXXXXXXXVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDK 595
PLEPY VI EPLSFVSPMVMLGRK ITGSFIGS+DET EVL+FCVDK
Sbjct: 410 PLEPYLALLKMDGKLVLMGVIAEPLSFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDK 231
Query: 594 GLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 478
GLTSQIEVVKM YVN+ALERLERNDVRYRFVVDVAGSN+
Sbjct: 230 GLTSQIEVVKMDYVNQALERLERNDVRYRFVVDVAGSNL 114
Score = 155 bits (332), Expect = 9e-037
Identities = 75/130 (57%), Positives = 78/130 (60%)
Frame = +2 / +1
Query: 563 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRGXXXXXXXXXXXX 742
ILTTSI EVSPLSTQN TS+VSSMLPMKLPVM F PSIT+GDTKL G
Sbjct: 199 ILTTSICEVSPLSTQNLRTSSVSSMLPMKLPVMVFLPSITIGDTKLSGSAITPISTSLPS 378
Query: 743 XXXXXXXXXXGWCTGTVXXXXXXXXXXXXXXXXXXLTRYASAPRWSIASARFLDDELITV 922
G TGTV LTRY+SAPR S ASARFL DELITV
Sbjct: 379 ILSSAR*GSSGCFTGTVSMM*SSESAAAAIWSASELTRYSSAPRSSTASARFLLDELITV 558
Query: 923 TWWPMALATF 952
TWWPM LATF
Sbjct: 559 TWWPMDLATF 588
Score = 95.5 bits (202), Expect(2) = 3e-024
Identities = 42/70 (60%), Positives = 46/70 (65%)
Frame = +1 / +3
Query: 529 LQPLQRXXXXXXXXXXXXGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGL 708
L+PL+R GEPLVDAEL+ L LV A DEAPRDGLPPQHHH HEA+ L
Sbjct: 165 LEPLERLVDVVHLDDLDLRGEPLVDAELEDLLRLVHAPDEAPRDGLPPQHHHWGHEAERL 344
Query: 709 ADDAQQHELA 738
D A QHELA
Sbjct: 345 RDHAHQHELA 374
Score = 40.5 bits (82), Expect(2) = 3e-024
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +1 / +3
Query: 886 LRALLGRRADHRHVVAHGLGYL 951
L LL RADHRHVVAHGLG+L
Sbjct: 522 LGPLLVGRADHRHVVAHGLGHL 587
>gb|CB881341.1|CB881341 HM09I05w HM Hordeum vulgare subsp. vulgare cDNA clone HM09I05
3-PRIME, mRNA sequence
Length = 621
Score = 260 bits (562), Expect = 2e-068
Identities = 117/159 (73%), Positives = 124/159 (77%)
Frame = -2 / -2
Query: 954 VKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXDYIIDTVPVHH 775
VKVAK+MGHHVTVISSS+KKRAEA+D LGAD YLV DYIIDTVPV H
Sbjct: 611 VKVAKSMGHHVTVISSSNKKRAEAVDDLGADEYLVSSDADQMAAAADSLDYIIDTVPVKH 432
Query: 774 PLEPYXXXXXXXXXXXXXXVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDK 595
PLEPY VI EPLSFVSPMVMLGRK ITGSFIGS+DET EVL+FCVDK
Sbjct: 431 PLEPYLALLKMDGKLVLMGVIAEPLSFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDK 252
Query: 594 GLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 478
GLTSQIEVVKM YVN+ALERLERNDVRYRFVVDVAGSN+
Sbjct: 251 GLTSQIEVVKMDYVNQALERLERNDVRYRFVVDVAGSNL 135
Score = 155 bits (332), Expect = 9e-037
Identities = 75/130 (57%), Positives = 78/130 (60%)
Frame = +2 / +1
Query: 563 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRGXXXXXXXXXXXX 742
ILTTSI EVSPLSTQN TS+VSSMLPMKLPVM F PSIT+GDTKL G
Sbjct: 220 ILTTSICEVSPLSTQNLRTSSVSSMLPMKLPVMVFLPSITIGDTKLSGSAITPISTSLPS 399
Query: 743 XXXXXXXXXXGWCTGTVXXXXXXXXXXXXXXXXXXLTRYASAPRWSIASARFLDDELITV 922
G TGTV LTRY+SAPR S ASARFL DELITV
Sbjct: 400 ILSSAR*GSSGCFTGTVSMM*SSESAAAAIWSASELTRYSSAPRSSTASARFLLDELITV 579
Query: 923 TWWPMALATF 952
TWWPM LATF
Sbjct: 580 TWWPMDLATF 609
Score = 95.5 bits (202), Expect(2) = 3e-024
Identities = 42/70 (60%), Positives = 46/70 (65%)
Frame = +1 / +3
Query: 529 LQPLQRXXXXXXXXXXXXGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGL 708
L+PL+R GEPLVDAEL+ L LV A DEAPRDGLPPQHHH HEA+ L
Sbjct: 186 LEPLERLVDVVHLDDLDLRGEPLVDAELEDLLRLVHAPDEAPRDGLPPQHHHWGHEAERL 365
Query: 709 ADDAQQHELA 738
D A QHELA
Sbjct: 366 RDHAHQHELA 395
Score = 40.5 bits (82), Expect(2) = 3e-024
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +1 / +3
Query: 886 LRALLGRRADHRHVVAHGLGYL 951
L LL RADHRHVVAHGLG+L
Sbjct: 543 LGPLLVGRADHRHVVAHGLGHL 608
>gb|CK123411.1|CK123411 BES1824103p14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P143 5-PRIME, mRNA sequence
Length = 620
Score = 179 bits (385), Expect(4) = 7e-056
Identities = 79/130 (60%), Positives = 83/130 (63%)
Frame = +2 / -2
Query: 1142 PPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXXYLAXXXXXXXX 1321
PPCVG PSV*TSLYDQIFLLQYCST AL G SRQH YL
Sbjct: 460 PPCVGLPSV*TSLYDQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTT 281
Query: 1322 XXXXXXXXXIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLA 1501
+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLA
Sbjct: 280 SPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLA 101
Query: 1502 AHPTTFLSDA 1531
AHP T +S+A
Sbjct: 100 AHPVTVVSEA 71
Score = 133 bits (286), Expect(4) = 4e-065
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +3
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 72 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 251
Query: 1350 M 1348
M
Sbjct: 252 M 254
Score = 116 bits (249), Expect(2) = 9e-027
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -1
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 353 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 174
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 173 HHIFRAC 153
Score = 101 bits (216), Expect(4) = 4e-065
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = -2 / +3
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGF 1138
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGF
Sbjct: 354 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGF 464
Score = 72.5 bits (152), Expect(2) = 4e-022
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +2
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 146 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 265
Score = 53.3 bits (110), Expect(2) = 4e-022
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / +2
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAG 1145
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG
Sbjct: 353 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAG 457
Score = 45.1 bits (92), Expect(4) = 4e-065
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -2 / +3
Query: 1095 PAGLAPEQAAPLLCAGVTVYSP 1030
P GLAP QAAPLLCAGVTV P
Sbjct: 510 PPGLAPXQAAPLLCAGVTVVQP 575
Score = 40.5 bits (82), Expect(4) = 7e-056
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +2 / -2
Query: 1031 GLYTVTPAHSSGAACSGARPAG 1096
G TVTPAHSSGAA SGA P G
Sbjct: 574 GCTTVTPAHSSGAAXSGAXPGG 509
Score = 31.8 bits (63), Expect(4) = 7e-056
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / -3
Query: 1108 KLLVDDHGGGES 1143
KLL+DDHGGGES
Sbjct: 495 KLLIDDHGGGES 460
Score = 25.8 bits (50), Expect(4) = 4e-065
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -2 / +1
Query: 1149 QGGFASTMVVDQKF 1108
+ FAS MVVDQKF
Sbjct: 454 RAAFASAMVVDQKF 495
Score = 24.4 bits (47), Expect(2) = 9e-027
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / -2
Query: 1107 QTSGRRPWWRRIHP 1148
+TS RRPW RR P
Sbjct: 496 ETSDRRPWRRRKPP 455
Score = 24.0 bits (46), Expect(4) = 7e-056
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2 / -3
Query: 1004 GVVSPKCFSG 1033
GV+ PKCF G
Sbjct: 603 GVIXPKCFXG 574
>gb|AL506219.1|AL506219 AL506219 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02G17T 5',
mRNA sequence
Length = 538
Score = 192 bits (413), Expect(2) = 3e-052
Identities = 85/138 (61%), Positives = 89/138 (64%)
Frame = +2 / -2
Query: 1118 STTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXXYLA 1297
STTM EA PPCVG PSV*TSLYDQIFLLQYCST AL G SRQH YL
Sbjct: 462 STTMAEAKPPCVGLPSV*TSLYDQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLL 283
Query: 1298 XXXXXXXXXXXXXXXXXIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GE 1477
+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GE
Sbjct: 282 TSGPTSTTSPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GE 103
Query: 1478 RCPVASLAAHPTTFLSDA 1531
R PVASLAAHP T +S+A
Sbjct: 102 RWPVASLAAHPVTVVSEA 49
Score = 133 bits (286), Expect(3) = 3e-063
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +2
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 50 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 229
Query: 1350 M 1348
M
Sbjct: 230 M 232
Score = 116 bits (249), Expect(3) = 3e-063
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = -2 / +2
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQK 1111
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQ+
Sbjct: 332 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQE 469
Score = 116 bits (249), Expect(3) = 7e-032
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -1
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 331 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 152
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 151 HHIFRAC 131
Score = 72.5 bits (152), Expect(3) = 1e-028
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +1
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 124 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 243
Score = 68.0 bits (142), Expect(3) = 1e-028
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = -1 / +1
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRR 1118
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR
Sbjct: 331 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRR 462
Score = 36.3 bits (73), Expect(3) = 7e-032
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +3 / -3
Query: 1119 RRPWWRRIHPAWAVHQXXXXXXXXXXXXXXAQRWPCRGCTRGST 1250
RRPW RR PA A + A+R PC +RGST
Sbjct: 461 RRPWRRRSRPASACRRCRRRCTTRSSCCSTARRSPCTAGSRGST 330
Score = 34.5 bits (69), Expect(2) = 3e-052
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / -3
Query: 1049 PAHSSGAACSGARPAGIF 1102
P ++GAACSGA PAGIF
Sbjct: 533 PRTAAGAACSGASPAGIF 480
Score = 31.3 bits (62), Expect(3) = 3e-063
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -2 / +1
Query: 1101 KIPAGLAPEQAAPLLCAG 1048
KIPAGLAPE AAP G
Sbjct: 481 KIPAGLAPEXAAPAAVRG 534
Score = 24.9 bits (48), Expect(3) = 1e-028
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2 / +2
Query: 1095 PAGLAPEQAAPLLCAGV 1045
P GL PLLCAGV
Sbjct: 488 PPGLRRSXRRPLLCAGV 538
Score = 23.1 bits (44), Expect(3) = 7e-032
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2 / -2
Query: 1046 TPAHSSGAACSGARPAG 1096
TPAHSSG +P G
Sbjct: 537 TPAHSSGRRXLRRKPGG 487
>gb|BI957127.1|BI957127 HVSMEn0007J20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007J20f, mRNA sequence
Length = 876
Score = 236 bits (509), Expect = 3e-061
Identities = 108/153 (70%), Positives = 114/153 (74%)
Frame = -2 / +2
Query: 951 KVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXDYIIDTVPVHHP 772
KVAK+MGHHVTVISSS++KRAEA+D LGAD YLV DYIIDTVPV HP
Sbjct: 2 KVAKSMGHHVTVISSSNRKRAEAVDDLGADEYLVSSDADQMAAAADSLDYIIDTVPVKHP 181
Query: 771 LEPYXXXXXXXXXXXXXXVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKG 592
LEPY VI EPLSFVSPMVMLGRK ITGSFIGS+DET EVL+FCVDKG
Sbjct: 182 LEPYLALLKMDGKLVLMGVIAEPLSFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDKG 361
Query: 591 LTSQIEVVKMGYVNEALERLERNDVRYRFVVDV 493
LTSQI VVKM YVN ALERLERNDVRYRF V V
Sbjct: 362 LTSQIYVVKMDYVNHALERLERNDVRYRFGVYV 460
Score = 151 bits (324), Expect = 1e-035
Identities = 74/130 (56%), Positives = 77/130 (59%)
Frame = +2 / -1
Query: 563 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRGXXXXXXXXXXXX 742
ILTT I EVSPLSTQN TS+VSSMLPMKLPVM F PSIT+GDTKL G
Sbjct: 390 ILTT*ICEVSPLSTQNLRTSSVSSMLPMKLPVMVFLPSITIGDTKLSGSAITPISTSLPS 211
Query: 743 XXXXXXXXXXGWCTGTVXXXXXXXXXXXXXXXXXXLTRYASAPRWSIASARFLDDELITV 922
G TGTV LTRY+SAPR S ASARFL DELITV
Sbjct: 210 ILSSAR*GSSGCFTGTVSMM*SSESAAAAIWSASELTRYSSAPRSSTASARFLLDELITV 31
Query: 923 TWWPMALATF 952
TWWPM LATF
Sbjct: 30 TWWPMDLATF 1
Score = 95.5 bits (202), Expect(2) = 2e-023
Identities = 42/70 (60%), Positives = 46/70 (65%)
Frame = +1 / -3
Query: 529 LQPLQRXXXXXXXXXXXXGGEPLVDAELKHLSGLVDAADEAPRDGLPPQHHHGRHEAQGL 708
L+PL+R GEPLVDAEL+ L LV A DEAPRDGLPPQHHH HEA+ L
Sbjct: 424 LEPLERMVDVVHLDDIDLRGEPLVDAELEDLLRLVHAPDEAPRDGLPPQHHHWGHEAERL 245
Query: 709 ADDAQQHELA 738
D A QHELA
Sbjct: 244 RDHAHQHELA 215
Score = 38.6 bits (78), Expect(2) = 2e-023
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1 / -3
Query: 907 RADHRHVVAHGLGYL 951
RADHRHVVAHGLG+L
Sbjct: 46 RADHRHVVAHGLGHL 2
>gb|BF065565.1|BF065565 HV_CEb0012M15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012M15f, mRNA sequence
Length = 745
Score = 187 bits (403), Expect(2) = 4e-060
Identities = 72/76 (94%), Positives = 73/76 (96%)
Frame = -2 / +1
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 1069
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPE A
Sbjct: 259 CCRDCPPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEHA 438
Query: 1068 APLLCAGVTVYSPLKH 1021
APLLCAGVTVYSPLKH
Sbjct: 439 APLLCAGVTVYSPLKH 486
Score = 171 bits (368), Expect(2) = 8e-055
Identities = 73/97 (75%), Positives = 74/97 (76%)
Frame = +2 / -3
Query: 1004 GVVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 1183
G +SPKCFSGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLY
Sbjct: 503 GSISPKCFSGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLY 324
Query: 1184 DQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXXYL 1294
DQIFLLQYCST AL G SRQH YL
Sbjct: 323 DQIFLLQYCSTFALHGGQSRQHPTITPTPTTSPTRYL 213
Score = 106 bits (227), Expect(2) = 9e-027
Identities = 51/80 (63%), Positives = 56/80 (70%)
Frame = -1 / +3
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 1070
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 258 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPRRACAGAC 437
Query: 1069 XXXAVRWRDGVQPAEALWAD 1010
AVR RDGVQPAEAL AD
Sbjct: 438 GAAAVRGRDGVQPAEALRAD 497
Score = 65.7 bits (137), Expect(2) = 4e-060
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -2 / +2
Query: 954 VKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYL 853
VKVAK+MGHHVTV+ SS+KKRAEA+D LGAD YL
Sbjct: 554 VKVAKSMGHHVTVMQSSNKKRAEAVDDLGADKYL 655
Score = 63.8 bits (133), Expect(2) = 8e-055
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +2 / -2
Query: 848 LTRYASAPRWSIASARFLDDELITVTWWPMALATF 952
L RY SAPR S ASARFL D+ ITVTWWPM LATF
Sbjct: 660 LKRYLSAPRSSTASARFLLDDCITVTWWPMDLATF 556
Score = 62.9 bits (131), Expect(3) = 3e-022
Identities = 30/72 (41%), Positives = 33/72 (45%)
Frame = +3 / -1
Query: 1035 CTPSRQRTXXXXXXXXXXXXGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXXAQ 1214
CTPSR RT GSSP+TS RRPW RR PA A + A
Sbjct: 472 CTPSRPRTAAAPHAPAQARRGSSPRTSDRRPWRRRSRPASACRRCRRRCTTRSSCCSTAL 293
Query: 1215 RWPCRGCTRGST 1250
R PC +RGST
Sbjct: 292 RSPCTAGSRGST 257
Score = 47.8 bits (98), Expect(3) = 3e-022
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1 / -2
Query: 1249 PNDHPDAYHVADAVLGHLGPDLH 1317
P+DHP A HVADAVL HL PDLH
Sbjct: 258 PHDHPHADHVADAVLAHLRPDLH 190
Score = 34.5 bits (69), Expect(2) = 9e-027
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1 / +1
Query: 943 QGHGPPRDGDQLVVQEA 893
Q HGPPRDGD +V QEA
Sbjct: 565 QVHGPPRDGDAVVQQEA 615
Score = 33.1 bits (66), Expect(3) = 3e-022
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / -1
Query: 886 LRALLGRRADHRHVVAHGLGY 948
L LL R HRHVVAHGLG+
Sbjct: 622 LGPLLVGRLHHRHVVAHGLGH 560
>gb|CA019762.1|CA019762 HV13A16r HV Hordeum vulgare subsp. vulgare cDNA clone HV13A16
5-PRIME, mRNA sequence
Length = 501
Score = 192 bits (413), Expect = 6e-048
Identities = 85/138 (61%), Positives = 89/138 (64%)
Frame = +2 / -2
Query: 1118 STTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXXYLA 1297
STTM EA PPCVG PSV*TSLYDQIFLLQYCST AL G SRQH YL
Sbjct: 500 STTMAEAKPPCVGLPSV*TSLYDQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLL 321
Query: 1298 XXXXXXXXXXXXXXXXXIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GE 1477
+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GE
Sbjct: 320 TSGPTSTTSPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GE 141
Query: 1478 RCPVASLAAHPTTFLSDA 1531
R PVASLAAHP T +S+A
Sbjct: 140 RWPVASLAAHPVTVVSEA 87
Score = 133 bits (286), Expect(2) = 1e-058
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +1
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 88 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 267
Query: 1350 M 1348
M
Sbjct: 268 M 270
Score = 116 bits (249), Expect(2) = 2e-030
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -1
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 369 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 190
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 189 HHIFRAC 169
Score = 114 bits (243), Expect(2) = 1e-058
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = -2 / +1
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVD 1117
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAS MVVD
Sbjct: 370 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASAMVVD 501
Score = 72.5 bits (152), Expect(2) = 2e-026
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +3
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 162 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 281
Score = 68.0 bits (142), Expect(2) = 2e-026
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = -1 / +3
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRR 1118
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR
Sbjct: 369 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRR 500
Score = 36.3 bits (73), Expect(2) = 2e-030
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +3 / -3
Query: 1119 RRPWWRRIHPAWAVHQXXXXXXXXXXXXXXAQRWPCRGCTRGST 1250
RRPW RR PA A + A+R PC +RGST
Sbjct: 499 RRPWRRRSRPASACRRCRRRCTTRSSCCSTARRSPCTAGSRGST 368
>gb|CB858813.1|CB858813 HI08G13w HI Hordeum vulgare subsp. vulgare cDNA clone HI08G13
3-PRIME, mRNA sequence
Length = 579
Score = 221 bits (477), Expect = 9e-057
Identities = 100/140 (71%), Positives = 105/140 (75%)
Frame = -2 / -3
Query: 897 KRAEAMDHLGADAYLVXXXXXXXXXXXXXXDYIIDTVPVHHPLEPYXXXXXXXXXXXXXX 718
KRAEA+D LGAD YLV DYIIDTVPV HPLEPY
Sbjct: 577 KRAEAVDDLGADEYLVSSDADQMAAAADSLDYIIDTVPVKHPLEPYLALLKMDGKLVLMG 398
Query: 717 VIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALE 538
VI EPLSFVSPMVMLGRK ITGSFIGS+DET EVL+FCVDKGLTSQIEVVKM YVN+ALE
Sbjct: 397 VIAEPLSFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDKGLTSQIEVVKMDYVNQALE 218
Query: 537 RLERNDVRYRFVVDVAGSNV 478
RLERNDVRYRFVVDVAGSN+
Sbjct: 217 RLERNDVRYRFVVDVAGSNL 158
Score = 116 bits (248), Expect = 3e-025
Identities = 59/112 (52%), Positives = 62/112 (55%)
Frame = +2 / +3
Query: 563 ILTTSIWEVSPLSTQN*STSAVSSMLPMKLPVMAFRPSITMGDTKLRGXXXXXXXXXXXX 742
ILTTSI EVSPLSTQN TS+VSSMLPMKLPVM F PSIT+GDTKL G
Sbjct: 243 ILTTSICEVSPLSTQNLRTSSVSSMLPMKLPVMVFLPSITIGDTKLSGSAITPISTSLPS 422
Query: 743 XXXXXXXXXXGWCTGTVXXXXXXXXXXXXXXXXXXLTRYASAPRWSIASARF 898
G TGTV LTRY+SAPR S ASARF
Sbjct: 423 ILSSAR*GSSGCFTGTVSMM*SSESAAAAIWSASELTRYSSAPRSSTASARF 578
>gb|BM373958.2|BM373958 EBma03_SQ003_D14_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_D14 5', mRNA sequence
Length = 428
Score = 190 bits (410), Expect(3) = 7e-056
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = -2 / +2
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQA 1069
CCR+C PCKANVEQYCNKKIWS+NDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQA
Sbjct: 131 CCRDCRPCKANVEQYCNKKIWSFNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQA 310
Query: 1068 APLLCAGVTVYSPLKHF 1018
APLLCAGVTVYSPLKHF
Sbjct: 311 APLLCAGVTVYSPLKHF 361
Score = 183 bits (394), Expect = 3e-045
Identities = 80/125 (64%), Positives = 82/125 (65%)
Frame = +2 / -3
Query: 1004 GVVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 1183
GV+SPKCFSGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSL
Sbjct: 375 GVISPKCFSGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLN 196
Query: 1184 DQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXXYLAXXXXXXXXXXXXXXXXXIGYFE 1363
DQIFLLQYCST AL G SRQH YL +GY E
Sbjct: 195 DQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPTTSCPGTMGYLE 16
Query: 1364 APRWF 1378
APR F
Sbjct: 15 APRSF 1
Score = 110 bits (234), Expect = 3e-023
Identities = 52/81 (64%), Positives = 57/81 (70%)
Frame = -1 / +1
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEVCGEDPXXXXXXXX 1070
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +RL HGRR EV GEDP
Sbjct: 130 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLRLRHGRRSEVRGEDPRRACAGAG 309
Query: 1069 XXXAVRWRDGVQPAEALWADD 1007
AVR RDGVQPAEAL ADD
Sbjct: 310 GAAAVRGRDGVQPAEALRADD 372
Score = 76.7 bits (161), Expect(2) = 3e-026
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = +1 / -2
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVV 1377
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VV
Sbjct: 130 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVV 2
Score = 62.9 bits (131), Expect(2) = 3e-026
Identities = 30/72 (41%), Positives = 34/72 (47%)
Frame = +3 / -1
Query: 1035 CTPSRQRTXXXXXXXXXXXXGSSPQTSGRRPWWRRIHPAWAVHQXXXXXXXXXXXXXXAQ 1214
CTPSR RT GSSP+TS RRPW RR PA A + A+
Sbjct: 344 CTPSRPRTAAAPPAPAQARRGSSPRTSDRRPWRRRSRPASACRRCRRR*TTRSSCCSTAR 165
Query: 1215 RWPCRGCTRGST 1250
R PC +RGST
Sbjct: 164 RSPCTAGSRGST 129
Score = 42.3 bits (86), Expect(3) = 7e-056
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -3 / +3
Query: 1364 LQSILWSLGTRWSARWWRSG 1305
L SI WS G RW ARWWRSG
Sbjct: 15 LPSIPWSQGMRWLARWWRSG 74
Score = 24.4 bits (47), Expect(3) = 7e-056
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +2
Query: 1377 NHLGASKYPM 1348
N LGASKYPM
Sbjct: 2 NDLGASKYPM 31
>gb|BI957159.1|BI957159 HVSMEn0007N14f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0007N14f,
mRNA sequence
Length = 849
Score = 171 bits (369), Expect = 7e-042
Identities = 83/149 (55%), Positives = 89/149 (59%)
Frame = +2 / -2
Query: 1085 RPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXX 1264
R GI +F S TMV A PP VG SV*TSLY QI +LQY ST AL GL SRQH
Sbjct: 509 RTEGILN*HF*SKTMV*AXPP*VGLLSV*TSLYAQILVLQYWSTFALHGLQSRQHPAITP 330
Query: 1265 XXXXXXXXYLAXXXXXXXXXXXXXXXXXIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSG 1444
YL +GY EAPR FL WWMSVWQ+PQ TF TTSSG
Sbjct: 329 TPTTSPTRYLVTSGPTSTTSPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSG 150
Query: 1445 PVFLRV*E*GERCPVASLAAHPTTFLSDA 1531
PVFLRV *GER PVASLAAHP T +S+A
Sbjct: 149 PVFLRVYV*GERWPVASLAAHPVTVVSEA 63
Score = 133 bits (286), Expect(2) = 2e-055
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +1
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 64 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 243
Query: 1350 M 1348
M
Sbjct: 244 M 246
Score = 117 bits (250), Expect = 2e-025
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = +1 / -1
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P DHP A HVADAVLGHL PD HHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 345 PRDHPHADHVADAVLGHLRPDFHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 166
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 165 HHIFRAC 145
Score = 103 bits (220), Expect(2) = 2e-055
Identities = 38/55 (69%), Positives = 44/55 (80%)
Frame = -2 / +1
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGL 1084
CCR+C PCKANV+QYC+ KIW+YNDVYTD +PT GG A TMV DQK KIP+ L
Sbjct: 346 CCRDCRPCKANVDQYCSTKIWAYNDVYTDSKPTHGGXAYTMVFDQKC*FKIPSVL 510
Score = 72.5 bits (152), Expect(2) = 3e-022
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +3
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 138 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 257
Score = 53.8 bits (111), Expect(2) = 3e-022
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = -1 / +3
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIRLHHGRRPEV 1109
VLPR+Q +Q +R VLQ +DL +QRRLH A++ RLHHG EV
Sbjct: 345 VLPRLQAVQSERRPVLQHQDLGVQRRLHRQQANSWRXRLHHGL*SEV 485
>gb|BQ468460.1|BQ468460 HM01F04T HM Hordeum vulgare subsp. vulgare cDNA clone HM01F04
5-PRIME, mRNA sequence
Length = 469
Score = 181 bits (389), Expect = 1e-044
Identities = 80/132 (60%), Positives = 84/132 (63%)
Frame = +2 / -3
Query: 1136 ANPPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXXYLAXXXXXX 1315
A PPCVG PSV*TSLYDQIFLLQYCST AL G SRQH YL
Sbjct: 467 AKPPCVGLPSV*TSLYDQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTS 288
Query: 1316 XXXXXXXXXXXIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVAS 1495
+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVAS
Sbjct: 287 TTSPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVAS 108
Query: 1496 LAAHPTTFLSDA 1531
LAAHP T +S+A
Sbjct: 107 LAAHPVTVVSEA 72
Score = 133 bits (286), Expect(2) = 2e-055
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +1
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 73 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 252
Query: 1350 M 1348
M
Sbjct: 253 M 255
Score = 116 bits (249), Expect(2) = 6e-027
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -2
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 354 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 175
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 174 HHIFRAC 154
Score = 103 bits (220), Expect(2) = 2e-055
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = -2 / +1
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFA 1135
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFA
Sbjct: 355 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFA 468
Score = 72.5 bits (152), Expect(2) = 1e-022
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +3
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 147 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 266
Score = 55.1 bits (114), Expect(2) = 1e-022
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = -1 / +3
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAGWIR 1136
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG +R
Sbjct: 354 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAGRLR 467
Score = 24.9 bits (48), Expect(2) = 6e-027
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +3 / -1
Query: 1134 RRIHPAWAVHQXXXXXXXXXXXXXXAQRWPCRGCTRGST 1250
RR PA A + A+R PC +RGST
Sbjct: 469 RRSRPASACRRCRRRCTTRSSCCSTARRSPCTAGSRGST 353
>emb|X92754.1|HVCADMRNA H.vulgare mRNA for cinnamyl alcohol dehydrogenase
Length = 458
Score = 216 bits (466), Expect = 3e-055
Identities = 95/149 (63%), Positives = 108/149 (72%)
Frame = -2 / +1
Query: 954 VKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXDYIIDTVPVHH 775
VK+AKAMGHHVTVISSS KKR EA++HLGAD YLV DYIIDTVPV H
Sbjct: 10 VKIAKAMGHHVTVISSSDKKRQEALEHLGADDYLVSSDSTRMQEVADSLDYIIDTVPVFH 189
Query: 774 PLEPYXXXXXXXXXXXXXXVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDK 595
PLEPY VI PL F++P+VMLGRK ITGSF+GSI ET E+L+FC +K
Sbjct: 190 PLEPYLSLLRLDGKLILMGVINTPLQFLTPVVMLGRKTITGSFVGSIKETEEMLEFCKEK 369
Query: 594 GLTSQIEVVKMGYVNEALERLERNDVRYR 508
GL+S IEVVKM YVN+ALERLE+NDVRYR
Sbjct: 370 GLSSMIEVVKMDYVNKALERLEKNDVRYR 456
>gb|BU995486.1|BU995486 HM10G11r HM Hordeum vulgare subsp. vulgare cDNA clone HM10G11
5-PRIME, mRNA sequence
Length = 439
Score = 179 bits (385), Expect = 4e-044
Identities = 79/130 (60%), Positives = 83/130 (63%)
Frame = +2 / -1
Query: 1142 PPCVGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXXYLAXXXXXXXX 1321
PPCVG PSV*TSLYDQIFLLQYCST AL G SRQH YL
Sbjct: 439 PPCVGLPSV*TSLYDQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTT 260
Query: 1322 XXXXXXXXXIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLA 1501
+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLA
Sbjct: 259 SPTTSCPGTMGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLA 80
Query: 1502 AHPTTFLSDA 1531
AHP T +S+A
Sbjct: 79 AHPVTVVSEA 50
Score = 133 bits (286), Expect(2) = 3e-053
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +3
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 51 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 230
Query: 1350 M 1348
M
Sbjct: 231 M 233
Score = 116 bits (249), Expect = 3e-025
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -3
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 332 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 153
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 152 HHIFRAC 132
Score = 96.4 bits (204), Expect(2) = 3e-053
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -2 / +3
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQG 1144
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPTQG
Sbjct: 333 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPTQG 437
Score = 72.5 bits (152), Expect(2) = 4e-022
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +2
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 125 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 244
Score = 53.3 bits (110), Expect(2) = 4e-022
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / +2
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH*WTAHAG 1145
VLPR+ +QG+R AVLQQEDLV+QRRLH A AG
Sbjct: 332 VLPRLPAVQGERRAVLQQEDLVVQRRLHRRQADAG 436
>gb|BU997581.1|BU997581 HI08G13r HI Hordeum vulgare subsp. vulgare cDNA clone HI08G13
5-PRIME, mRNA sequence
Length = 529
Score = 168 bits (362), Expect = 7e-041
Identities = 76/127 (59%), Positives = 80/127 (62%)
Frame = +2 / -2
Query: 1151 VGRPSV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXXYLAXXXXXXXXXXX 1330
VG PSV*TSLYDQIFLLQYCST AL G SRQH YL
Sbjct: 528 VGLPSV*TSLYDQIFLLQYCSTFALHGRQSRQHPTITPTPTTSPTRYLLTSGPTSTTSPT 349
Query: 1331 XXXXXXIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHP 1510
+GY EAPR FL WWMSVWQ+PQ TF TTSSGPVFLRV *GER PVASLAAHP
Sbjct: 348 TSCPGTMGYLEAPRSFLTWWMSVWQMPQYLTFNTTSSGPVFLRVYV*GERWPVASLAAHP 169
Query: 1511 TTFLSDA 1531
T +S+A
Sbjct: 168 VTVVSEA 148
Score = 133 bits (286), Expect(2) = 9e-052
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -2 / +2
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+KV YCGICHTDIHQ KN LGASKYP
Sbjct: 149 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKVKYCGICHTDIHQVKNDLGASKYP 328
Query: 1350 M 1348
M
Sbjct: 329 M 331
Score = 116 bits (249), Expect = 3e-025
Identities = 49/67 (73%), Positives = 55/67 (82%)
Frame = +1 / -1
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL HL PDLHHLA+HL+P DH IL S +VVL LVDVRVA+ AV +L
Sbjct: 430 PHDHPHADHVADAVLAHLRPDLHHLANHLMPWDHGILGSTQVVLDLVDVRVANAAVFNLQ 251
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 250 HHIFRAC 230
Score = 91.3 bits (193), Expect(2) = 9e-052
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = -2 / +2
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTDGRPT 1150
CCR+C PCKANVEQYCNKKIWSYNDVYTDGRPT
Sbjct: 431 CCRDCRPCKANVEQYCNKKIWSYNDVYTDGRPT 529
Score = 72.5 bits (152), Expect(2) = 2e-021
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = -1 / +1
Query: 1456 QEHRP*RCGGEGALLRDLPHGHPPGQEPPRGFKVSYGPWA 1337
QE+RP*RCG EG +LR LPHGHPPGQE P F+VS+GP A
Sbjct: 223 QENRP*RCGVEG*ILRHLPHGHPPGQERPGCFQVSHGPRA 342
Score = 51.0 bits (105), Expect(2) = 2e-021
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -1 / +1
Query: 1249 VLPRVQPLQGQR*AVLQQEDLVIQRRLH 1166
VLPR+ +QG+R AVLQQEDLV+QRRLH
Sbjct: 430 VLPRLPAVQGERRAVLQQEDLVVQRRLH 513
>gb|CB881629.1|CB881629 HM10G11w HM Hordeum vulgare subsp. vulgare cDNA clone HM10G11
3-PRIME, mRNA sequence
Length = 524
Score = 203 bits (438), Expect = 2e-051
Identities = 92/130 (70%), Positives = 96/130 (73%)
Frame = -2 / -1
Query: 867 ADAYLVXXXXXXXXXXXXXXDYIIDTVPVHHPLEPYXXXXXXXXXXXXXXVIGEPLSFVS 688
AD YLV DYIIDTVPV HPLEPY VI EPLSFVS
Sbjct: 524 ADEYLVSSDADQMAAAADSLDYIIDTVPVKHPLEPYLALLKMDGKLVLMGVIAEPLSFVS 345
Query: 687 PMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYR 508
PMVMLGRK ITGSFIGS+DET EVL+FCVDKGLTSQIEVVKM YVN+ALERLERNDVRYR
Sbjct: 344 PMVMLGRKTITGSFIGSMDETEEVLKFCVDKGLTSQIEVVKMDYVNQALERLERNDVRYR 165
Query: 507 FVVDVAGSNV 478
FVVDVAGSN+
Sbjct: 164 FVVDVAGSNL 135
>gb|BQ661428.1|BQ661428 HM03H06u HM Hordeum vulgare subsp. vulgare cDNA clone HM03H06
3-PRIME, mRNA sequence
Length = 486
Score = 195 bits (421), Expect = 5e-049
Identities = 86/109 (78%), Positives = 90/109 (82%)
Frame = -2 / -2
Query: 804 YIIDTVPVHHPLEPYXXXXXXXXXXXXXXVIGEPLSFVSPMVMLGRKAITGSFIGSIDET 625
YIIDTVPV HPLEPY VI EPLSFVSPMVMLGRK ITGSFIGS+DET
Sbjct: 440 YIIDTVPVKHPLEPYLALLKMDGKLVLMGVIAEPLSFVSPMVMLGRKTITGSFIGSMDET 261
Query: 624 AEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNV 478
EVL+FCVDKGLTSQIEVVKM YVN+ALERLERNDVRYRFVVDVAGSN+
Sbjct: 260 EEVLKFCVDKGLTSQIEVVKMDYVNQALERLERNDVRYRFVVDVAGSNL 114
>gb|BQ760493.1|BQ760493 EBro02_SQ005_D11_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_D11 5', mRNA sequence
Length = 434
Score = 155 bits (334), Expect = 5e-037
Identities = 71/123 (57%), Positives = 75/123 (60%)
Frame = +2 / -2
Query: 1163 SV*TSLYDQIFLLQYCSTLALQGLHSRQHXXXXXXXXXXXXXYLAXXXXXXXXXXXXXXX 1342
SV*TSLYDQIFLLQYCST AL G RQH YL
Sbjct: 433 SV*TSLYDQIFLLQYCSTFALHGRQWRQHPTITPTPTMSPTRYLLTSGPTSTTSPTTSCR 254
Query: 1343 XXIGYFEAPRWFLAWWMSVWQIPQ*STFTTTSSGPVFLRV*E*GERCPVASLAAHPTTFL 1522
+GY EAPR FL WWMSVWQ+PQ F TTSSGPVFLRV *GER PVASLAAHP T +
Sbjct: 253 GTMGYLEAPRSFLTWWMSVWQMPQYLPFNTTSSGPVFLRVYV*GERWPVASLAAHPVTVV 74
Query: 1523 SDA 1531
S+A
Sbjct: 73 SEA 65
Score = 130 bits (279), Expect(2) = 2e-047
Identities = 51/61 (83%), Positives = 53/61 (86%)
Frame = -2 / +3
Query: 1530 ASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYP 1351
ASE V GWAARDATGHLSPY+YTLR TGPEDVV+K YCGICHTDIHQ KN LGASKYP
Sbjct: 66 ASETTVTGWAARDATGHLSPYTYTLRKTGPEDVVLKGKYCGICHTDIHQVKNDLGASKYP 245
Query: 1350 M 1348
M
Sbjct: 246 M 248
Score = 113 bits (242), Expect = 2e-024
Identities = 47/67 (70%), Positives = 52/67 (77%)
Frame = +1 / -1
Query: 1249 PNDHPDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLH 1428
P+DHP A HVADAVL H GPDLHH A+H +P DH IL S +VVL LVDVRVA+ AV L
Sbjct: 347 PHDHPHADHVADAVLAHFGPDLHHFANHFMPWDHGILGSTQVVLDLVDVRVANAAVFTLQ 168
Query: 1429 HHIFRAC 1449
HHIFRAC
Sbjct: 167 HHIFRAC 147
Score = 79.9 bits (168), Expect(2) = 2e-047
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = -2 / +3
Query: 1248 CCRECSPCKANVEQYCNKKIWSYNDVYTD 1162
CCR C PCKANVEQYCNKKIWSYNDVYTD
Sbjct: 348 CCRHCRPCKANVEQYCNKKIWSYNDVYTD 434
>gb|BF623534.2|BF623534 HVSMEa0002J16f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0002J16f, mRNA sequence
Length = 834
Score = 95.0 bits (201), Expect(3) = 7e-047
Identities = 36/76 (47%), Positives = 49/76 (64%)
Frame = -2 / +2
Query: 1245 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 1066
CR C C E YC+ + + N V DG TQGGF+ +VV+Q +V+++P L+ AA
Sbjct: 353 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFSDVLVVNQDYVLRVPESLSLAGAA 532
Query: 1065 PLLCAGVTVYSPLKHF 1018
PLLCAGVTVYSP+ +
Sbjct: 533 PLLCAGVTVYSPMMQY 580
Score = 88.1 bits (186), Expect(3) = 7e-047
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = -2 / +2
Query: 1512 VGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 1348
+GWAARD +G LSPYS++ R EDV +KVL+CGICHTD+H AKN G + YP+
Sbjct: 86 LGWAARDESGLLSPYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEWGNALYPI 250
Score = 59.3 bits (123), Expect(4) = 5e-023
Identities = 35/81 (43%), Positives = 40/81 (49%)
Frame = +2 / -1
Query: 1004 GVVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 1183
G + P C GLYTVTPA S+GAA + R +G T W TT PP V PS T L
Sbjct: 594 GALRPYCIIGLYTVTPAQSNGAAPARDRLSGTRRT*SWLTTSTSEKPPWVVAPS*STPLE 415
Query: 1184 DQIFLLQYCSTLALQGLHSRQ 1246
+ Q S LQ H RQ
Sbjct: 414 VSTRVEQ*FSYPLLQVPHERQ 352
Score = 44.1 bits (90), Expect(3) = 7e-047
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = -2 / +2
Query: 954 VKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLV 850
VK KA G VT ISSS +KR EA++ L ADA+LV
Sbjct: 644 VKFGKAFGMTVTGISSSPRKREEALERLCADAFLV 748
Score = 41.4 bits (84), Expect(4) = 5e-023
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = +2 / -1
Query: 1367 PRWFLAWWMSVWQIPQ*STFTTTSS 1441
P FLA W SVWQIPQ ST TSS
Sbjct: 231 PHSFLAMWRSVWQIPQKSTLIVTSS 157
Score = 40.0 bits (81), Expect(4) = 5e-023
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +2 / -1
Query: 848 LTRYASAPRWSIASARFLDDELITVTWWPMAL 943
LT+ ASA R S AS+RFL DELI VT P AL
Sbjct: 750 LTKNASAQRRSSASSRFLGDELIPVTVIPNAL 655
Score = 22.6 bits (43), Expect(4) = 5e-023
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2 / -1
Query: 1469 *GERCPVASLAAHPT 1513
*GER P +SLAA P+
Sbjct: 129 *GERRPDSSLAAQPS 85
>gb|BU994106.1|BU994106 HM05M03r HM Hordeum vulgare subsp. vulgare cDNA clone HM05M03
5-PRIME, mRNA sequence
Length = 648
Score = 92.7 bits (196), Expect(3) = 3e-040
Identities = 34/75 (45%), Positives = 50/75 (66%)
Frame = -2 / +2
Query: 1245 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 1066
C+ C C E +C I++YN V DG T GG++S +VV ++FVV+ P + ++ A
Sbjct: 308 CQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHGGYSSMVVVHERFVVRFPDAMPLDKGA 487
Query: 1065 PLLCAGVTVYSPLKH 1021
PLLCAG+TVYSP+K+
Sbjct: 488 PLLCAGITVYSPMKY 532
Score = 88.6 bits (187), Expect(3) = 3e-040
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = -2 / +2
Query: 1521 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 1348
+K VG AA DA+G LSP + T R+TG +DV++K+LYCGICH+D+H KN +KYPM
Sbjct: 32 KKAVGLAALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPM 205
Score = 67.0 bits (140), Expect(3) = 2e-021
Identities = 33/59 (55%), Positives = 38/59 (64%)
Frame = +1 / -3
Query: 1261 PDAYHVADAVLGHLGPDLHHLADHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 1437
PD VA LGH+ DL LA LVPRDH +L VVL V VRVADPAV++L+H I
Sbjct: 292 PDTDTVAGLELGHVLADLGDLAGDLVPRDHGVLSVLPVVLDAVQVRVADPAVQNLYHDI 116
Score = 50.1 bits (103), Expect(3) = 2e-021
Identities = 28/59 (47%), Positives = 30/59 (50%)
Frame = +2 / -1
Query: 1004 GVVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSL 1180
G SP F GLYTV PAHS GA S +G TT TT + PP V PS T L
Sbjct: 549 GTFSPWYFMGLYTVMPAHSRGAPLSSGMASGNRTTKRSCTTTMLE*PPWVTVPSRSTEL 373
Score = 23.5 bits (45), Expect(3) = 3e-040
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2 / +2
Query: 954 VKVAKAMGHHVTVISS 907
VK KA G VTVISS
Sbjct: 599 VKFGKAFGMKVTVISS 646
Score = 23.5 bits (45), Expect(3) = 2e-021
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / -1
Query: 905 DELITVTWWPMAL 943
DELITVT+ P AL
Sbjct: 648 DELITVTFIPKAL 610
>gb|BQ661689.1|BQ661689 HM04O09u HM Hordeum vulgare subsp. vulgare cDNA clone HM04O09
3-PRIME, mRNA sequence
Length = 525
Score = 166 bits (357), Expect = 3e-040
Identities = 71/79 (89%), Positives = 75/79 (94%)
Frame = -2 / -2
Query: 714 IGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALER 535
I EPLSFVSPMVMLGRK ITGSFIGS+DET EVL+FCVDKGLTSQIEVVKM YVN+ALER
Sbjct: 473 IAEPLSFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDKGLTSQIEVVKMDYVNQALER 294
Query: 534 LERNDVRYRFVVDVAGSNV 478
LERNDVRYRFVVDVAGSN+
Sbjct: 293 LERNDVRYRFVVDVAGSNL 237
>gb|CK124014.1|CK124014 BES1824106h23 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010H236 5-PRIME, mRNA sequence
Length = 509
Score = 166 bits (357), Expect = 3e-040
Identities = 71/79 (89%), Positives = 75/79 (94%)
Frame = -2 / +2
Query: 714 IGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALER 535
I EPLSFVSPMVMLGRK ITGSFIGS+DET EVL+FCVDKGLTSQIEVVKM YVN+ALER
Sbjct: 47 IAEPLSFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDKGLTSQIEVVKMDYVNQALER 226
Query: 534 LERNDVRYRFVVDVAGSNV 478
LERNDVRYRFVVDVAGSN+
Sbjct: 227 LERNDVRYRFVVDVAGSNL 283
>gb|AL510922.1|AL510922 AL510922 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06G20u 3',
mRNA sequence
Length = 474
Score = 164 bits (353), Expect = 1e-039
Identities = 70/79 (88%), Positives = 74/79 (93%)
Frame = -2 / -2
Query: 714 IGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALER 535
I EPL FVSPMVMLGRK ITGSFIGS+DET EVL+FCVDKGLTSQIEVVKM YVN+ALER
Sbjct: 401 IAEPLXFVSPMVMLGRKTITGSFIGSMDETEEVLKFCVDKGLTSQIEVVKMDYVNQALER 222
Query: 534 LERNDVRYRFVVDVAGSNV 478
LERNDVRYRFVVDVAGSN+
Sbjct: 221 LERNDVRYRFVVDVAGSNL 165
>gb|CA014567.1|CA014567 HT11L08r HT Hordeum vulgare subsp. vulgare cDNA clone HT11L08
5-PRIME, mRNA sequence
Length = 622
Score = 95.0 bits (201), Expect(2) = 2e-039
Identities = 36/76 (47%), Positives = 49/76 (64%)
Frame = -2 / +3
Query: 1245 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 1066
CR C C E YC+ + + N V DG TQGGF+ +VV+Q +V+++P L+ AA
Sbjct: 360 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFSDVLVVNQDYVLRVPESLSLAGAA 539
Query: 1065 PLLCAGVTVYSPLKHF 1018
PLLCAGVTVYSP+ +
Sbjct: 540 PLLCAGVTVYSPMMQY 587
Score = 89.0 bits (188), Expect(2) = 2e-039
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = -2 / +3
Query: 1548 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 1369
+ S+ +GWAARD +G LSPYS++ R EDV +KVL+CGICHTD+H AKN
Sbjct: 57 SEQSSMEKGTPALGWAARDESGLLSPYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEW 236
Query: 1368 GASKYPM 1348
G + YP+
Sbjct: 237 GNALYPI 257
>gb|BQ768318.1|BQ768318 EBro08_SQ011_J10_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_J10 5', mRNA sequence
Length = 589
Score = 95.0 bits (201), Expect(2) = 2e-039
Identities = 36/76 (47%), Positives = 49/76 (64%)
Frame = -2 / +1
Query: 1245 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 1066
CR C C E YC+ + + N V DG TQGGF+ +VV+Q +V+++P L+ AA
Sbjct: 349 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFSDVLVVNQDYVLRVPESLSLAGAA 528
Query: 1065 PLLCAGVTVYSPLKHF 1018
PLLCAGVTVYSP+ +
Sbjct: 529 PLLCAGVTVYSPMMQY 576
Score = 89.0 bits (188), Expect(2) = 2e-039
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = -2 / +1
Query: 1548 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 1369
+ S+ +GWAARD +G LSPYS++ R EDV +KVL+CGICHTD+H AKN
Sbjct: 46 SEQSSMEKGTPALGWAARDESGLLSPYSFSRRARKDEDVTIKVLFCGICHTDLHIAKNEW 225
Query: 1368 GASKYPM 1348
G + YP+
Sbjct: 226 GNALYPI 246
>gb|BE559002.2|BE559002 HV_CEb0022D12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022D12f, mRNA sequence
Length = 694
Score = 92.3 bits (195), Expect(3) = 7e-039
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = -2 / +3
Query: 1245 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 1066
CR C C + + +C + + + V DG TQGGF+ +VVD+ +VV++P GL + AA
Sbjct: 198 CRSCVSCSSGHDNHCPTLVLTCSAVDYDGATTQGGFSDVLVVDKGYVVRVPEGLPLDGAA 377
Query: 1065 PLLCAGVTVYSPLKHF 1018
PLLCAGVTVYSP+ F
Sbjct: 378 PLLCAGVTVYSPMMEF 425
Score = 65.2 bits (136), Expect(3) = 3e-021
Identities = 36/75 (48%), Positives = 42/75 (56%)
Frame = +2 / -1
Query: 1004 GVVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 1183
G + P GLYTVTPA SSGAA S RP+G TT STT NPP V PS T+L
Sbjct: 439 GALRPNSIIGLYTVTPAQSSGAAPSRGRPSGTRTT*PLSTTSTSENPPWVVAPS*STALQ 260
Query: 1184 DQIFLLQYCSTLALQ 1228
+ + Q+ S LQ
Sbjct: 259 VRTSVGQWLSCPLLQ 215
Score = 54.7 bits (113), Expect(3) = 7e-039
Identities = 30/61 (49%), Positives = 33/61 (54%)
Frame = -2 / +3
Query: 954 VKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXDYIIDTVPVHH 775
VK KA G VTVISSS +KR EA+ LGADA+LV D IIDTV
Sbjct: 489 VKFGKAFGMTVTVISSSPRKREEAVKRLGADAFLVSQDPEQMKAAAGTMDGIIDTVSAGP 668
Query: 774 P 772
P
Sbjct: 669 P 671
Score = 53.3 bits (110), Expect(3) = 7e-039
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = -2 / +3
Query: 1437 DVVVKVLYCGICHTDIHQAKNHLGASKYPM 1348
DV +KVL+CGICHTD+H KN G + YP+
Sbjct: 6 DVTIKVLFCGICHTDLHIVKNEWGNALYPV 95
Score = 41.4 bits (84), Expect(3) = 3e-021
Identities = 21/32 (65%), Positives = 23/32 (71%)
Frame = +2 / -1
Query: 848 LTRYASAPRWSIASARFLDDELITVTWWPMAL 943
LT+ ASAP AS+RFL DELITVT P AL
Sbjct: 595 LTKNASAPSRLTASSRFLGDELITVTVIPNAL 500
Score = 33.6 bits (67), Expect(3) = 3e-021
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1 / -3
Query: 1327 DHLVPRDHRIL*SPEVVLGLVDVRVADPAVEHLHHHI 1437
++L+P D + +VL ++V VADPA EHL HI
Sbjct: 116 NNLMPGDDGVEGVSPLVLDDMEVGVADPAEEHLDRHI 6
>gb|BF257384.2|BF257384 HVSMEf0012L22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0012L22f, mRNA sequence
Length = 538
Score = 92.3 bits (195), Expect(2) = 1e-038
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = -2 / +1
Query: 1245 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 1066
CR C C + + +C + + + V DG TQGGF+ +VVD+ +VV++P GL + AA
Sbjct: 310 CRSCVSCSSGHDNHCPTLVLTCSAVDYDGATTQGGFSDVLVVDKGYVVRVPEGLPLDGAA 489
Query: 1065 PLLCAGVTVYSPLKHF 1018
PLLCAGVTVYSP+ F
Sbjct: 490 PLLCAGVTVYSPMMEF 537
Score = 89.0 bits (188), Expect(2) = 1e-038
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = -2 / +1
Query: 1548 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 1369
++ S+A +GWAA+D +G LSPYS++ R +DV +KVL+CGICHTD+H KN
Sbjct: 7 SKQSSMAKGMPAIGWAAKDTSGVLSPYSFSRRAQKDDDVTIKVLFCGICHTDLHIVKNEW 186
Query: 1368 GASKYPM 1348
G + YP+
Sbjct: 187 GNALYPV 207
>gb|BI957209.1|BI957209 HVSMEn0008C08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0008C08f, mRNA sequence
Length = 651
Score = 96.4 bits (204), Expect(3) = 3e-037
Identities = 50/102 (49%), Positives = 53/102 (51%)
Frame = -2 / +2
Query: 954 VKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXDYIIDTVPVHH 775
VKVAK+MGHHVTVISSS+KKRAEA+D L AD YLV DY IDT PV
Sbjct: 200 VKVAKSMGHHVTVISSSNKKRAEAVDDLXADEYLVSSDADQMAAAADSLDYNIDTXPVKQ 379
Query: 774 PLEPYXXXXXXXXXXXXXXVIGEPLSFVSPMVMLGRKAITGS 649
PLEPY I EPL F G K GS
Sbjct: 380 PLEPYLALLKMDGKLMLMGDIPEPLIFWFQW*SWGGKTFPGS 505
Score = 78.5 bits (165), Expect(3) = 3e-030
Identities = 31/48 (64%), Positives = 34/48 (70%)
Frame = +2 / -1
Query: 1004 GVVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPP 1147
GV+SPKCFSGLYTVTPAHSSGAACSG++P G EA PP
Sbjct: 150 GVISPKCFSGLYTVTPAHSSGAACSGSKPGGDLHHELLIDDQAEAKPP 7
Score = 69.8 bits (146), Expect(3) = 3e-030
Identities = 33/60 (55%), Positives = 34/60 (56%)
Frame = +2 / -1
Query: 773 GWCTGTVXXXXXXXXXXXXXXXXXXLTRYASAPRWSIASARFLDDELITVTWWPMALATF 952
G TG V LTRY+SA R S ASARFL DELITVTWWPM LATF
Sbjct: 381 GCFTGXVSIL*SSESAAAAIWSASELTRYSSAXRSSTASARFLLDELITVTWWPMDLATF 202
Score = 61.6 bits (128), Expect(3) = 3e-037
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -2 / +2
Query: 1095 PAGLAPEQAAPLLCAGVTVYSPLKHF 1018
P GL PEQAAPLLCAGVTVYSPLKHF
Sbjct: 59 PPGLLPEQAAPLLCAGVTVYSPLKHF 136
Score = 36.8 bits (74), Expect(3) = 3e-037
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = -2 / +1
Query: 1128 MVVDQKFVVKIPAGLA 1081
+VVDQKFVVKIPAGLA
Sbjct: 25 LVVDQKFVVKIPAGLA 72
Score = 22.6 bits (43), Expect(3) = 3e-030
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1 / -3
Query: 649 APRDGLPPQHHHGRHEAQGLADDAQQHELA 738
A R+G E GL D A QHELA
Sbjct: 505 ASREGFSSPASPLEPEY*GLRDIAHQHELA 416
>gb|AL504684.1|AL504684 AL504684 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06B04V 5', mRNA sequence
Length = 700
Score = 94.1 bits (199), Expect(2) = 2e-036
Identities = 35/74 (47%), Positives = 50/74 (67%)
Frame = -2 / +2
Query: 1245 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 1066
C +C C ++ E YC+K +YN V+ DG T GG++S V ++FVV+IP L + A
Sbjct: 383 CLDCEQCDSSQENYCDKVALTYNGVFWDGSITYGGYSSMYVAHKRFVVRIPDSLPLDXXA 562
Query: 1065 PLLCAGVTVYSPLK 1024
PLLCAG+TVY+P+K
Sbjct: 563 PLLCAGITVYTPMK 604
Score = 79.9 bits (168), Expect(2) = 2e-036
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = -2 / +2
Query: 1515 VVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 1348
V GWAA D +G + PY++ R G +DV +KVLYCG+CHTD+H N G + YP+
Sbjct: 113 VSGWAAMDESGTMVPYAFKRRENGVDDVTIKVLYCGMCHTDLHFINNDWGITMYPV 280
>gb|BI951701.1|BI951701 HVSMEm0002B16f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0002B16f, mRNA sequence
Length = 829
Score = 90.9 bits (192), Expect(3) = 8e-035
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = -2 / +3
Query: 1245 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 1066
CR C C + + +C + + + V DG TQGGF+ +VVD+ +VV++P GL + AA
Sbjct: 426 CRSCVSCSSGHDNHCPTLVLTCSAVDYDGATTQGGFSDVLVVDKGYVVRVPGGLPLDGAA 605
Query: 1065 PLLCAGVTVYSPLKHF 1018
PLLCAGVTVYSP+ F
Sbjct: 606 PLLCAGVTVYSPMIGF 653
Score = 54.2 bits (112), Expect(3) = 8e-035
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -2 / +3
Query: 1440 EDVVVKVLYCGICHTDIHQAKNHLGASKYPM 1348
+DV +KVL+CGICHTD+H KN G + YP+
Sbjct: 231 DDVTIKVLFCGICHTDLHIVKNEWGNALYPV 323
Score = 41.4 bits (84), Expect(3) = 8e-035
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -2 / +3
Query: 1548 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNT 1447
++ S+A +GWAA+D +G LSPYS++ R++
Sbjct: 33 SKQSSMAKGMPAIGWAAKDTSGVLSPYSFSRRSS 134
>gb|BG300015.1|BG300015 HVSMEa0022P19f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0022P19f, mRNA sequence
Length = 809
Score = 82.2 bits (173), Expect(2) = 2e-033
Identities = 32/67 (47%), Positives = 43/67 (64%)
Frame = -2 / +1
Query: 1548 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 1369
+ S+ +GWAARD +G LSPYS++ R EDV +KVL+CGI HTD+H KN
Sbjct: 46 SEQSSMEKGTPALGWAARDESGLLSPYSFSRRARKDEDVTIKVLFCGIWHTDLHIGKNEW 225
Query: 1368 GASKYPM 1348
G + YP+
Sbjct: 226 GNALYPI 246
Score = 81.7 bits (172), Expect(2) = 2e-033
Identities = 32/75 (42%), Positives = 45/75 (60%)
Frame = -2 / +1
Query: 1245 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 1066
CR C C E YC+ + ++N V DG TQ GF+ +VV+Q FV+++P L+ A
Sbjct: 349 CRSCCTCSKGYENYCSTLVLTFNGVDYDGATTQWGFSDVLVVNQDFVLRVPESLSLAGAG 528
Query: 1065 PLLCAGVTVYSPLKH 1021
P + +GVTV SPL H
Sbjct: 529 PFVLSGVTVSSPLIH 573
>gb|CK125801.1|CK125801 BES1824110n12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N1210 5-PRIME, mRNA sequence
Length = 795
Score = 88.6 bits (187), Expect(3) = 2e-033
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = -2 / +2
Query: 1521 RKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPM 1348
+K VG AA DA+G LSP + T R+TG +DV++K+LYCGICH+D+H KN +KYPM
Sbjct: 164 KKAVGLAALDASGRLSPLAITRRSTGDDDVMIKILYCGICHSDLHSIKNDWKNAKYPM 337
Score = 57.4 bits (119), Expect(3) = 2e-033
Identities = 23/58 (39%), Positives = 32/58 (55%)
Frame = -2 / +2
Query: 1245 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQ 1072
C+ C C E +C I++YN V DG T GG++S VV ++FVV+ P A Q
Sbjct: 440 CQSCESCDKGFENHCPGIIFTYNSVDRDGTVTHGGYSSMXVVHERFVVRFPGRHAAGQ 613
Score = 35.4 bits (71), Expect(3) = 2e-033
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -2 / +3
Query: 1077 EQAAPLLCAGVTVYSP 1030
++ APLLCAG+TVYSP
Sbjct: 609 DKGAPLLCAGITVYSP 656
>gb|AL450716.1|AL450716 AL450716 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK03O12u 5', mRNA sequence
Length = 500
Score = 87.7 bits (185), Expect(2) = 5e-033
Identities = 32/63 (50%), Positives = 44/63 (69%)
Frame = -2 / +2
Query: 1536 SLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASK 1357
S+A +GWAA+D +G LSPYS++ R +DV +KVL+CGICHTD+H KN G +
Sbjct: 8 SMAKGMPAIGWAAKDTSGVLSPYSFSRRAQKDDDVTIKVLFCGICHTDLHIVKNEWGNAL 187
Query: 1356 YPM 1348
YP+
Sbjct: 188 YPV 196
Score = 74.8 bits (157), Expect(2) = 5e-033
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = -2 / +2
Query: 1245 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 1066
CR C C + + +C + + + V DG TQGGF+ +VVD+ +VV++P GL AA
Sbjct: 299 CRSCVSCSSGHDNHCPTLVLTCSAVDYDGATTQGGFSDVLVVDKGYVVRVPEGLPLYGAA 478
Query: 1065 PLLCAGV 1045
PLLCAGV
Sbjct: 479 PLLCAGV 499
>gb|BG299988.1|BG299988 HVSMEa0022N15f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0022N15f, mRNA sequence
Length = 787
Score = 95.0 bits (201), Expect(2) = 1e-032
Identities = 36/76 (47%), Positives = 49/76 (64%)
Frame = -2 / +3
Query: 1245 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 1066
CR C C E YC+ + + N V DG TQGGF+ +VV+Q +V+++P L+ AA
Sbjct: 102 CRSCGTCSKGYENYCSTLVLTSNGVDYDGATTQGGFSDVLVVNQDYVLRVPESLSLAGAA 281
Query: 1065 PLLCAGVTVYSPLKHF 1018
PLLCAGVTVYSP+ +
Sbjct: 282 PLLCAGVTVYSPMMQY 329
Score = 66.1 bits (138), Expect(2) = 1e-032
Identities = 33/64 (51%), Positives = 37/64 (57%)
Frame = -2 / +3
Query: 954 VKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXDYIIDTVPVHH 775
VK KA G VTVISSS +KR EA++ LGADA+LV D IIDTV H
Sbjct: 393 VKFGKAFGMTVTVISSSPRKREEALERLGADAFLVSQDAEQMKAAAGTMDGIIDTVSAGH 572
Query: 774 PLEP 763
PL P
Sbjct: 573 PLVP 584
>gb|BF620007.2|BF620007 HVSMEc0009P20f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0009P20f, mRNA sequence
Length = 601
Score = 86.3 bits (182), Expect(2) = 2e-032
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = -2 / +3
Query: 1548 NRMGSLASERKVVGWAARDATGHLSPYSYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHL 1369
+ S+ +GWAARD +G LSPYS++ R EDV + VL+CGICHTD+H AKN
Sbjct: 45 SEQSSMDKGTPALGWAARDESGLLSPYSFSRRARKDEDVTINVLFCGICHTDLHIAKNEW 224
Query: 1368 GASKYPM 1348
G + YP+
Sbjct: 225 GNALYPI 245
Score = 74.4 bits (156), Expect(2) = 2e-032
Identities = 30/72 (41%), Positives = 40/72 (55%)
Frame = -2 / +3
Query: 1245 CRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 1066
CR C C E YC + + + V DG TQ GF+ +VV+Q +V+ +P L+ A
Sbjct: 348 CRSCGTCSKGYENYCCTLVLTCDGVDYDGSTTQRGFSDVLVVNQDYVLLVPESLSLTGAG 527
Query: 1065 PLLCAGVTVYSP 1030
PLLC G TVY P
Sbjct: 528 PLLCTGGTVYRP 563
>gb|AL509635.1|AL509635 AL509635 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02G17u 3',
mRNA sequence
Length = 443
Score = 140 bits (300), Expect = 2e-032
Identities = 60/68 (88%), Positives = 64/68 (94%)
Frame = -2 / -2
Query: 681 VMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFV 502
VMLGRK ITGSFIGS+DET EVL+ CVDKGLTSQIEVVKM YVN+ALERLERNDVRYRFV
Sbjct: 442 VMLGRKTITGSFIGSMDETEEVLKXCVDKGLTSQIEVVKMDYVNQALERLERNDVRYRFV 263
Query: 501 VDVAGSNV 478
VDVAGSN+
Sbjct: 262 VDVAGSNL 239
>gb|BQ758620.1|BQ758620 EBma07_SQ002_F09_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_F09 5', mRNA sequence
Length = 240
Score = 140 bits (300), Expect = 2e-032
Identities = 56/57 (98%), Positives = 56/57 (98%)
Frame = -2 / +3
Query: 1188 WSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHF 1018
WSYNDVYTDGRPTQGGFAS MVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHF
Sbjct: 3 WSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKHF 173
Score = 137 bits (293), Expect = 2e-031
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +2 / -3
Query: 1004 GVVSPKCFSGLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEANPPCVGRPSV*TSLY 1183
GV+SPKCFSGLYTVTPAHSSGAACSGA PAGIFTTNF STTM EA PPCVG PSV*TSLY
Sbjct: 187 GVISPKCFSGLYTVTPAHSSGAACSGASPAGIFTTNF*STTMAEAKPPCVGLPSV*TSLY 8
Query: 1184 DQ 1189
DQ
Sbjct: 7 DQ 2
>gb|AV916085.1|AV916085 AV916085 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1g09 5', mRNA sequence
Length = 616
Score = 93.2 bits (197), Expect(2) = 4e-032
Identities = 38/77 (49%), Positives = 55/77 (71%)
Frame = -2 / +2
Query: 708 EPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLE 529
EPL+ + ++ G K + G+ +GS+ + +L F G+T+ +EVVKM YVN A+ERLE
Sbjct: 278 EPLALPAYAIIGGGKRLAGNGVGSVRDCQAMLDFAGKHGITADVEVVKMDYVNTAVERLE 457
Query: 528 RNDVRYRFVVDVAGSNV 478
+NDVRYRFV+DVAGS +
Sbjct: 458 KNDVRYRFVIDVAGSQL 508
Score = 66.1 bits (138), Expect(2) = 4e-032
Identities = 33/64 (51%), Positives = 37/64 (57%)
Frame = -2 / +2
Query: 954 VKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVXXXXXXXXXXXXXXDYIIDTVPVHH 775
VK KA G VTVISSS +KR EA++ LGADA+LV D IIDTV H
Sbjct: 32 VKFGKAFGMTVTVISSSPRKREEALERLGADAFLVSQDAEQMKAAAGTMDGIIDTVSAGH 211
Query: 774 PLEP 763
PL P
Sbjct: 212 PLVP 223
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 559,787,513
Number of Sequences: 312970
Number of extensions: 7622180
Number of successful extensions: 102632
Number of sequences better than 1.0e-020: 125
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 20780377299
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)