TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405010.2.1
(1644 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV912893.1|AV912893 AV912893 K. Sato unpublished cDNA li... 485 e-136
gb|BU994669.1|BU994669 HM07M21r HM Hordeum vulgare subsp. v... 478 e-134
gb|BG365776.2|BG365776 HVSMEi0004C15f Hordeum vulgare 20 DA... 439 e-131
gb|BU999262.1|BU999262 HI13P05r HI Hordeum vulgare subsp. v... 458 e-128
gb|BU995366.1|BU995366 HM10A14r HM Hordeum vulgare subsp. v... 444 e-125
gb|BI958534.1|BI958534 HVSMEn0015H18f Hordeum vulgare rachi... 309 e-121
gb|BJ463324.1|BJ463324 BJ463324 K. Sato unpublished cDNA li... 433 e-120
gb|BI960436.1|BI960436 HVSMEn0024J13f Hordeum vulgare rachi... 393 e-109
gb|BE456081.2|BE456081 HVSMEg0019L02f Hordeum vulgare pre-a... 372 e-106
gb|CA019987.1|CA019987 HV14A03r HV Hordeum vulgare subsp. v... 384 e-106
gb|BI957842.1|BI957842 HVSMEn0011K03f Hordeum vulgare rachi... 384 e-106
gb|AL507105.1|AL507105 AL507105 Hordeum vulgare Barke devel... 370 e-104
gb|AL506128.1|AL506128 AL506128 Hordeum vulgare Barke devel... 347 e-101
gb|BQ765070.1|BQ765070 EBca01_SQ005_P13_R carpel, pre-anthe... 354 9e-097
gb|BM444118.1|BM444118 EBem09_SQ004_D11_R embryo, 1 Day ger... 342 3e-093
gb|BG417706.1|BG417706 HVSMEk0019D05f Hordeum vulgare testa... 338 6e-092
gb|CK123655.1|CK123655 BES1824104n08 BES1824 Hordeum vulgar... 303 1e-081
gb|BU974454.1|BU974454 HB27P18r BC Hordeum vulgare subsp. v... 300 1e-080
gb|BG299537.1|BG299537 HVSMEa0020K13f Hordeum vulgare seedl... 298 1e-080
gb|BI950324.1|BI950324 HVSMEl0020E03f Hordeum vulgare spike... 299 3e-080
gb|BI956263.1|BI956263 HVSMEn0001M04f Hordeum vulgare rachi... 283 6e-076
gb|AV917643.1|AV917643 AV917643 K. Sato unpublished cDNA li... 272 4e-072
gb|BJ462434.1|BJ462434 BJ462434 K. Sato unpublished cDNA li... 266 3e-070
gb|BJ465099.1|BJ465099 BJ465099 K. Sato unpublished cDNA li... 260 1e-068
gb|CA027982.1|CA027982 HZ60K04r HZ Hordeum vulgare subsp. v... 257 4e-068
gb|BM373982.2|BM373982 EBma03_SQ003_E19_R maternal, 8 DPA, ... 228 1e-059
gb|BM374131.2|BM374131 EBma03_SQ003_L19_R maternal, 8 DPA, ... 226 6e-059
gb|BM368508.2|BM368508 EBem08_SQ002_I21_R embryo, 40 DPA, n... 204 3e-052
gb|AL510624.1|AL510624 AL510624 Hordeum vulgare Barke devel... 163 8e-052
gb|CB881530.1|CB881530 HM10B13w HM Hordeum vulgare subsp. v... 203 3e-051
gb|AL509541.1|AL509541 AL509541 Hordeum vulgare Barke devel... 158 4e-044
gb|BF620768.2|BF620768 HVSMEc0020M20f Hordeum vulgare seedl... 174 1e-042
gb|CB880201.1|CB880201 HM05M21w HM Hordeum vulgare subsp. v... 162 4e-039
gb|BJ468230.1|BJ468230 BJ468230 K. Sato unpublished cDNA li... 137 2e-031
gb|AJ433998.1|AJ433998 AJ433998 S00002 Hordeum vulgare subs... 133 2e-030
gb|CV060478.1|CV060478 BNEL58f1 Barley EST endosperm librar... 119 4e-026
gb|BQ660689.1|BQ660689 HI04P09u HI Hordeum vulgare subsp. v... 112 6e-024
>gb|AV912893.1|AV912893 AV912893 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10n14 5', mRNA sequence
Length = 627
Score = 485 bits (1053), Expect = e-136
Identities = 198/208 (95%), Positives = 203/208 (97%)
Frame = -3 / +3
Query: 1156 DTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEPEFYVLKEDE 977
DTIYSNFIDALPVVKYCSEN KRLIHFSTCEVYGKTIGSFLPKDHPLRKE EFYVL EDE
Sbjct: 3 DTIYSNFIDALPVVKYCSENGKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLTEDE 182
Query: 976 SPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPS 797
SPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGL+FTIVRPFNWIGPRMDFIPGVDGPS
Sbjct: 183 SPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLDFTIVRPFNWIGPRMDFIPGVDGPS 362
Query: 796 EGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVVLMIENPARANGHIFNVG 617
EGVPRVLACFSNNLLRREPLKLVDGG+SQRTFVYIKDAIEAV+LMIENPARANGHIFNVG
Sbjct: 363 EGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNVG 542
Query: 616 NPNNEVTVRELAQMMTEVYANVSGEAPL 533
NP+NEVTVRELA+MMTEVYA VSGE PL
Sbjct: 543 NPDNEVTVRELAEMMTEVYAKVSGEPPL 626
Score = 362 bits (784), Expect = 4e-099
Identities = 152/208 (73%), Positives = 175/208 (84%)
Frame = +2 / -2
Query: 533 QRCLS*DICVDLCHHLGQLPNGNFIVRIPNIEDVAIGSSRIFNHQHYSFDSILDVDKGSL 712
QR LS*D+ +DLCHH QLPN +FIVR+PN+ED+ IGSSR+FNHQ SF+ ILDV+K SL
Sbjct: 626 QRGLS*DLSIDLCHHFSQLPNSDFIVRVPNVEDMTIGSSRVFNHQKNSFNGILDVNKSSL 447
Query: 713 RLTPINKLQGLSPEQIVTEASQNPRHTLARTIDTRNEIHPWPNPIKRSHDCEFKAIFCTF 892
L IN+LQGLS +IV EASQNPR+TLARTI+ RNE+HPWPNPI+RSH+ E KAIFC F
Sbjct: 446 GLAAINELQGLSA*EIVAEASQNPRNTLARTINARNEVHPWPNPIERSHNREIKAIFCAF 267
Query: 893 SKYKPLNKLLRASIGPSLFHDWTKNTGRLIFFKNIKFRFLAERVVFGEEAADGLAIDLAR 1072
SK KP NKLL A IGPSLFH+WTK+ G LIF ++IKF FLAE V+ GEEAADGLAIDLAR
Sbjct: 266 SKNKPFNKLLCARIGPSLFHNWTKDAG*LIFCQHIKFSFLAEGVILGEEAADGLAIDLAR 87
Query: 1073 GEVDETLAVLGAVLDHWECIDEVAVDGV 1156
GEVD+TLAVL AVLDH E +DEVAVDGV
Sbjct: 86 GEVDQTLAVLRAVLDHRERVDEVAVDGV 3
Score = 361 bits (783), Expect = 5e-099
Identities = 167/208 (80%), Positives = 172/208 (82%)
Frame = +3 / -3
Query: 534 SGASPETFA*TSVIIWANSLTVTSLFGFPTLKMWPLARAGFXXXXXXXXXXXLM*TKVL* 713
SG SPET A*TSVII ANSLTVTSL GFPTLK+ PLARAGF LM*TKVL
Sbjct: 625 SGGSPETLA*TSVIISANSLTVTSLSGFPTLKI*PLARAGFSIIKRTASMASLM*TKVLW 446
Query: 714 D*PPSTSFKGSLRSRLLLKQAKTRGTPSLGPSTPGMKSILGPIQLKGLTIVNSRPFSAPS 893
D PPSTSF+GSLR RLLLKQAKTRGTPSLGPSTPGMKSILGPIQLKGLTIV SRPFSAPS
Sbjct: 445 DSPPSTSFRGSLRKRLLLKQAKTRGTPSLGPSTPGMKSILGPIQLKGLTIVKSRPFSAPS 266
Query: 894 ANTSLSISCFAQA*DHLCFTIGPKIQGDSSSLRT*NXXXXXXXXXXXXKLPMVLP*TSHV 1073
A TSLSISCFA A*DHLCFTIGPK+QGDSSS+ T*N KLPMVLP*TSHV
Sbjct: 265 AKTSLSISCFAHA*DHLCFTIGPKMQGDSSSVST*NSASLRRG*SLGRKLPMVLP*TSHV 86
Query: 1074 EKWMRRLLFSEQYLTTGSASMKLL*MVS 1157
EKW+RRL FSEQYLTTGSASMKLL*MVS
Sbjct: 85 EKWIRRLPFSEQYLTTGSASMKLL*MVS 2
Score = 327 bits (708), Expect = 1e-088
Identities = 142/196 (72%), Positives = 154/196 (78%)
Frame = +1 / -1
Query: 571 SSFGPTP*R*LHCSDSQH*RCGHWLEQDFQSSALQLR*HP*CRQRFSETDPHQQASRALS 750
SSF PTP*+*LHC SQ *R HWLEQ FQSS QL+ HP*C+Q+FS T HQ+AS AL
Sbjct: 588 SSFQPTP*Q*LHCQGSQR*RYDHWLEQGFQSSKEQLQWHP*CKQKFSGTRRHQRASGALC 409
Query: 751 GADCY*SKPKPEAHPR*DHRHQE*NPSLAQSN*KVSRL*IQGHFLHLQQIQASQ*VASRK 930
DC *SKPKPE HPR*DH+ QE*+PSLAQSN*KVS+ * QGHFL LQQ QA Q* A R
Sbjct: 408 VRDCC*SKPKPEEHPR*DHQRQE*SPSLAQSN*KVSQS*NQGHFLRLQQKQAFQ*AALRT 229
Query: 931 HRTIFVSRLDQKYRATHLL*EHKIQVPCGAGGLWGGSCRWSCHRPRTWRSG*DACCSRSS 1110
HRTI VS+LDQ+ R THLL HKIQ+PCG G WGGSCRWSCHRPRTWRSG DAC S SS
Sbjct: 228 HRTISVSQLDQRCRVTHLLSAHKIQLPCGGGDPWGGSCRWSCHRPRTWRSGSDACRSPSS 49
Query: 1111 T*PLGVHR*SCCRWCQ 1158
T*P G R*SCCRWC+
Sbjct: 48 T*PPGARR*SCCRWCR 1
Score = 237 bits (512), Expect = 1e-061
Identities = 124/198 (62%), Positives = 133/198 (67%)
Frame = -1 / +1
Query: 1125 SQWSSTAPRTASVXXXXXXXXXXXXXXXXXXPKTTRSARNLNFMFLKKMSRPVFLVQS*N 946
S+WSSTA RTASV P+ T SAR LNFM +KMS P LVQ *N
Sbjct: 34 SRWSSTARRTASV*STSPRARSMARPSAASSPRITPSARKLNFMC*QKMSHPASLVQL*N 213
Query: 945 KDGPMLARSNLLRGLYLLKVQKMALNSQS*DLLIGLGQGWISFLVSMVLARVCLGFWLAS 766
+DGPM A+S+LL+GL+LLK QKMAL S+ *DL IGLGQGW SFL MVLARV LGFWLAS
Sbjct: 214 RDGPMRAQSSLLKGLFLLKAQKMALISRL*DLSIGLGQGWTSFLALMVLARVFLGFWLAS 393
Query: 765 VTICSGESP*SLLMGVSLREPLSTSRMLSKL*C**LKILLEPMATSSMLGIRTMKLPLGS 586
TI ESP*S LM S RE L TSRM KL **LK LLEPM SS LG TMK LGS
Sbjct: 394 ATISYAESP*SSLMAASPRELLFTSRMPLKLFF**LKTLLEPMVISSTLGTLTMKSLLGS 573
Query: 585 WPK**QRSTQMSQERHRW 532
W K**QRS SQE RW
Sbjct: 574 WLK**QRSMLRSQESPRW 627
Score = 185 bits (399), Expect(3) = 1e-065
Identities = 77/110 (70%), Positives = 88/110 (80%)
Frame = -2 / +2
Query: 1010 GT*ILCS*RR*VALYFWSNRETKMVLCLREATY*EACIC*RCRKWP*IHNRETF*LDWAK 831
G+*ILC+ RR*V L+ WSN ET+MVLC+R+A Y*+AC C*R RKWP* H+ ETF LDWAK
Sbjct: 149 GS*ILCADRR*VTLHLWSNCETEMVLCVRKAAY*KACFC*RRRKWP*FHDCETFQLDWAK 328
Query: 830 DGFHSWCRWS*RGCASGFGLLQ*QSAPERALEAC*WGSVSENLCLHQGCY 681
DG HSW WS*RGC+SGFGLLQ QS +RA EA *W V EN CLHQGC+
Sbjct: 329 DGLHSWR*WS*RGCSSGFGLLQQQSLTQRAPEAR*WRRVPENFCLHQGCH 478
Score = 57.9 bits (120), Expect(3) = 1e-065
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -2 / +2
Query: 1133 RCTPSGQVLLREQQASHPLLHVRGLWQDH 1047
R P GQVLL E+QAS PLLHVRGLWQDH
Sbjct: 26 RRAPGGQVLLGERQASDPLLHVRGLWQDH 112
Score = 46.9 bits (96), Expect(3) = 1e-065
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / +2
Query: 641 QWPHLQCWESEQ*SYR*GVGPNDDRGLRKCLRRGTA 534
QW +LQ WE Q*S+ *GVG NDDRGL LRR A
Sbjct: 518 QWSYLQRWEP*Q*SHC*GVG*NDDRGLC*GLRRAPA 625
>gb|BU994669.1|BU994669 HM07M21r HM Hordeum vulgare subsp. vulgare cDNA clone HM07M21
5-PRIME, mRNA sequence
Length = 652
Score = 478 bits (1039), Expect = e-134
Identities = 193/208 (92%), Positives = 203/208 (97%)
Frame = -3 / +2
Query: 1069 CEVYGKTIGSFLPKDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYACAKQLIERLVFAE 890
CEVYGKTIGSFLPKDHPLRKE EFYVL EDESPCIFGPIVKQRWSYACAKQLIERLVFAE
Sbjct: 29 CEVYGKTIGSFLPKDHPLRKEAEFYVLTEDESPCIFGPIVKQRWSYACAKQLIERLVFAE 208
Query: 889 GAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQ 710
GAENGL+FTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGG+SQ
Sbjct: 209 GAENGLDFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGESQ 388
Query: 709 RTFVYIKDAIEAVVLMIENPARANGHIFNVGNPNNEVTVRELAQMMTEVYANVSGEAPLD 530
RTFVYIKDAIEAV+LMIENPARANGHIFNVGNP+NEVTVRELA+MMTEVYA VSGE PL+
Sbjct: 389 RTFVYIKDAIEAVLLMIENPARANGHIFNVGNPDNEVTVRELAEMMTEVYAKVSGEPPLE 568
Query: 529 EPMIDVSSSQFYGEGYDDSDKRIPDMTI 446
EP+IDVS+ +FYGEGYDDSDKRIPDMT+
Sbjct: 569 EPVIDVSAKEFYGEGYDDSDKRIPDMTL 652
Score = 357 bits (773), Expect = 1e-097
Identities = 148/207 (71%), Positives = 173/207 (83%)
Frame = +2 / -1
Query: 452 HVGDPLVAIIVSFAVELTRAHVNHGLIQRCLS*DICVDLCHHLGQLPNGNFIVRIPNIED 631
HVGDPLVA++V FAVE RAHV+H L+QR LS*D+ +DLCHH QLPN +FIVR+PN+E
Sbjct: 646 HVGDPLVAVVVPFAVEFFRAHVDHRLLQRGLS*DLSIDLCHHFSQLPNSDFIVRVPNVEY 467
Query: 632 VAIGSSRIFNHQHYSFDSILDVDKGSLRLTPINKLQGLSPEQIVTEASQNPRHTLARTID 811
+ IGSSR+FNHQ SF+ ILDV+K SL L I++LQGLS +IV EASQNPR+TLARTI+
Sbjct: 466 MTIGSSRVFNHQKNSFNGILDVNKSSLGLAAIDELQGLSA*EIVAEASQNPRNTLARTIN 287
Query: 812 TRNEIHPWPNPIKRSHDCEFKAIFCTFSKYKPLNKLLRASIGPSLFHDWTKNTGRLIFFK 991
RNE+HPWPNPI+RSHD E KAIFC FSK KPLNKLL A IGPSLFH+WTK+ G LIF +
Sbjct: 286 ARNEVHPWPNPIERSHDREIKAIFCAFSKNKPLNKLLCARIGPSLFHNWTKDAG*LIFCQ 107
Query: 992 NIKFRFLAERVVFGEEAADGLAIDLAR 1072
+IKF FLAE V+ GEEAADGLAIDLAR
Sbjct: 106 HIKFSFLAEGVILGEEAADGLAIDLAR 26
Score = 312 bits (675), Expect = 4e-084
Identities = 145/186 (77%), Positives = 149/186 (80%)
Frame = +3 / -2
Query: 513 TSIMGSSSGASPETFA*TSVIIWANSLTVTSLFGFPTLKMWPLARAGFXXXXXXXXXXXL 692
TSI GSSSG SPET A*TSVII ANSLTVTSL GFPTL + PLARAGF L
Sbjct: 585 TSITGSSSGGSPETLA*TSVIISANSLTVTSLSGFPTLNI*PLARAGFSIIRRTASMASL 406
Query: 693 M*TKVL*D*PPSTSFKGSLRSRLLLKQAKTRGTPSLGPSTPGMKSILGPIQLKGLTIVNS 872
M*TKVL D PPSTSF+GSLR RLLLKQAKTRGTPSLGPSTPGMKSILGPIQLKGLTIV S
Sbjct: 405 M*TKVLWDSPPSTSFRGSLRRRLLLKQAKTRGTPSLGPSTPGMKSILGPIQLKGLTIVKS 226
Query: 873 RPFSAPSANTSLSISCFAQA*DHLCFTIGPKIQGDSSSLRT*NXXXXXXXXXXXXKLPMV 1052
RPFSAPSA TSLSISCFA A*DHLCFTIGPK+QGDSSS+ T*N KLPMV
Sbjct: 225 RPFSAPSAKTSLSISCFAHA*DHLCFTIGPKMQGDSSSVST*NSASLRRG*SLGRKLPMV 46
Query: 1053 LP*TSH 1070
LP*TSH
Sbjct: 45 LP*TSH 28
Score = 272 bits (589), Expect = 3e-072
Identities = 120/167 (71%), Positives = 131/167 (78%)
Frame = +1 / -3
Query: 571 SSFGPTP*R*LHCSDSQH*RCGHWLEQDFQSSALQLR*HP*CRQRFSETDPHQQASRALS 750
SSF PTP*+*LHC SQ * HWLEQ FQSS QL+ HP*C+Q+FS T H++AS AL
Sbjct: 527 SSFQPTP*Q*LHCQGSQR*IYDHWLEQGFQSSEEQLQWHP*CKQKFSGTRRHRRASGALC 348
Query: 751 GADCY*SKPKPEAHPR*DHRHQE*NPSLAQSN*KVSRL*IQGHFLHLQQIQASQ*VASRK 930
DC *SKPKPE HPR*DH+ QE*+PSLAQSN*KVSR * QGHFL LQQ QASQ* A R
Sbjct: 347 VGDCC*SKPKPEEHPR*DHQRQE*SPSLAQSN*KVSRS*NQGHFLRLQQKQASQ*AALRT 168
Query: 931 HRTIFVSRLDQKYRATHLL*EHKIQVPCGAGGLWGGSCRWSCHRPRT 1071
HRTI VS+LDQ+ R THLL HKIQ+PCG G WGGSCRWSCHRPRT
Sbjct: 167 HRTISVSQLDQRCRVTHLLSAHKIQLPCGGGDPWGGSCRWSCHRPRT 27
Score = 250 bits (540), Expect(2) = 7e-067
Identities = 131/193 (67%), Positives = 139/193 (72%)
Frame = -1 / +3
Query: 1029 KTTRSARNLNFMFLKKMSRPVFLVQS*NKDGPMLARSNLLRGLYLLKVQKMALNSQS*DL 850
+ T SAR LNFM +KMS P LVQ *N+DGPM A+S+LLRGL+LLK QKMAL S+S*DL
Sbjct: 69 RITPSARKLNFMC*QKMSHPASLVQL*NRDGPMRAQSSLLRGLFLLKAQKMALISRS*DL 248
Query: 849 LIGLGQGWISFLVSMVLARVCLGFWLASVTICSGESP*SLLMGVSLREPLSTSRMLSKL* 670
IGLGQGW SFL MVLARV LGFWLAS TI ESP*S M S RE L TSRM KL
Sbjct: 249 SIGLGQGWTSFLALMVLARVFLGFWLASATISYAESP*SSSMAASPRELLFTSRMPLKLF 428
Query: 669 C**LKILLEPMATSSMLGIRTMKLPLGSWPK**QRSTQMSQERHRWMSP*LT*ARVSSTA 490
**LK LLEPM S LG TMK LGSW K**QRS SQE RW S * T*AR +STA
Sbjct: 429 F**LKTLLEPMVIYSTLGTLTMKSLLGSWLK**QRSMLRSQESPRWRSL*ST*ARKNSTA 608
Query: 489 KDTMIATRGSPT* 451
K T ATRGSPT*
Sbjct: 609 KGTTTATRGSPT* 647
Score = 188 bits (406), Expect(2) = 1e-062
Identities = 78/110 (70%), Positives = 88/110 (80%)
Frame = -2 / +1
Query: 1010 GT*ILCS*RR*VALYFWSNRETKMVLCLREATY*EACIC*RCRKWP*IHNRETF*LDWAK 831
G+*ILC+ RR*V L+ WSN ET+MVLC+R+A Y*EAC C*R RKWP* H+RETF LDWAK
Sbjct: 88 GS*ILCADRR*VTLHLWSNCETEMVLCVRKAAY*EACFC*RRRKWP*FHDRETFQLDWAK 267
Query: 830 DGFHSWCRWS*RGCASGFGLLQ*QSAPERALEAC*WGSVSENLCLHQGCY 681
DG HSW WS*RGC+SGFGLLQ QS +RA EA W V EN CLHQGC+
Sbjct: 268 DGLHSWR*WS*RGCSSGFGLLQQQSPTQRAPEARRWRRVPENFCLHQGCH 417
Score = 72.5 bits (152), Expect(2) = 1e-062
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = -2 / +1
Query: 641 QWPHLQCWESEQ*SYR*GVGPNDDRGLRKCLRRGTAG*AHD*RELESVLXXXXXXXRQED 462
QW ++Q WE Q*S+ *GVG NDDRGL LRR AG A D RE E +L RQED
Sbjct: 457 QWSYIQRWEP*Q*SHC*GVG*NDDRGLC*GLRRAPAGGACDRRERERILRRRVRRQRQED 636
Query: 461 PRHD 450
PRHD
Sbjct: 637 PRHD 648
Score = 25.4 bits (49), Expect(2) = 7e-067
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 1070 VRGLWQDH 1047
VRGLWQDH
Sbjct: 28 VRGLWQDH 51
>gb|BG365776.2|BG365776 HVSMEi0004C15f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004C15f, mRNA sequence
Length = 936
Score = 439 bits (952), Expect(4) = e-131
Identities = 178/189 (94%), Positives = 182/189 (96%)
Frame = -3 / +2
Query: 1462 DLDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLAVDVYCDKIRHLVDPAPPHLAG 1283
DLDG +VAPLTICMIGAGGFIGSHLCEKLMAET+HVVLAVDVY DKIRHLVDP PPHLAG
Sbjct: 149 DLDGGAVAPLTICMIGAGGFIGSHLCEKLMAETQHVVLAVDVYSDKIRHLVDPPPPHLAG 328
Query: 1282 RISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 1103
RISFHRLNIKND RLEGL+KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS
Sbjct: 329 RISFHRLNIKNDPRLEGLVKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 508
Query: 1102 ENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYACA 923
EN KRLIHFSTCEVYGKTIGSFLPKDHPLRKE EFYVL EDESPCIFGPIVKQRWSYACA
Sbjct: 509 ENGKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLTEDESPCIFGPIVKQRWSYACA 688
Query: 922 KQLIERLVF 896
KQLIE+LVF
Sbjct: 689 KQLIEKLVF 715
Score = 332 bits (720), Expect(3) = 4e-094
Identities = 153/196 (78%), Positives = 158/196 (80%)
Frame = +3 / -1
Query: 867 NSRPFSAPSANTSLSISCFAQA*DHLCFTIGPKIQGDSSSLRT*NXXXXXXXXXXXXKLP 1046
N PF TS SISCFA A*DHLCFTIGPK+QGDSSS+ T*N KLP
Sbjct: 744 NQGPFLRLQQKTSFSISCFAHA*DHLCFTIGPKMQGDSSSVST*NSASLRXG*SLGRKLP 565
Query: 1047 MVLP*TSHVEKWMRRLLFSEQYLTTGSASMKLL*MVSRGRVL*SAGVQIAARLMVRSAIL 1226
MVLP*TSHVEKW+RRL FSEQYLTTGSASMKLL*MVS GRVL*SAGVQIAAR +VRSAIL
Sbjct: 564 MVLP*TSHVEKWIRRLPFSEQYLTTGSASMKLL*MVSSGRVL*SAGVQIAARFIVRSAIL 385
Query: 1227 MSPSSLESFLMLRRWKEMRPARCGGAGSTRWRILSQYTSTARTTWRVSAMSFSQRWEPMK 1406
PS SFLMLRRWKEMRPAR GG GSTRWRILS+ TSTARTT VSAMSFSQRWEPMK
Sbjct: 384 TRPSRRGSFLMLRRWKEMRPARWGGGGSTRWRILSE*TSTARTTCWVSAMSFSQRWEPMK 205
Query: 1407 PPAPIMQMVRGATELP 1454
PPAPIMQMV GAT P
Sbjct: 204 PPAPIMQMVSGATAPP 157
Score = 219 bits (473), Expect(3) = 5e-058
Identities = 92/132 (69%), Positives = 98/132 (74%)
Frame = +1 / -2
Query: 868 IQGHFLHLQQIQASQ*VASRKHRTIFVSRLDQKYRATHLL*EHKIQVPCGAGGLWGGSCR 1047
I+G F + QASQ*VA R HRTI VS+LDQ+ R THLL HKIQ+PCG G WGGSCR
Sbjct: 743 IKGLFCAFSKKQASQ*VALRTHRTISVSQLDQRCRVTHLLSAHKIQLPCGXGDPWGGSCR 564
Query: 1048 WSCHRPRTWRSG*DACCSRSST*PLGVHR*SCCRWCQGGECCSPPACR*PPG*WSDRPS* 1227
WSCHRPRTWRSG DAC S SST*P G R*SCCRWC+ CCSPPACR PPG SDRPS*
Sbjct: 563 WSCHRPRTWRSGSDACRSPSST*PPGARR*SCCRWCRAAACCSPPACRSPPGLSSDRPS* 384
Query: 1228 *APRAWSHS*C* 1263
PR S*C*
Sbjct: 383 RGPRGGGRS*C* 348
Score = 153 bits (328), Expect(4) = 6e-079
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = +2 / -3
Query: 1211 QIGHLDEPLEPGVILDVKAVEGDAPREVRRRGVDEVADLIAVYVDGEDDMARLGHELLAE 1390
QIGHLDE LE GV+LDV+AVEGDAP EV RR VDEVADL+ V VDGEDD+ LGHELLAE
Sbjct: 400 QIGHLDEALEAGVVLDVEAVEGDAPGEVGRRRVDEVADLVGVDVDGEDDVLGLGHELLAE 221
Query: 1391 VGADEAAGANHADGEGRDGVAVQI 1462
VGADEAAGA+HADGE R G AVQI
Sbjct: 220 VGADEAAGADHADGERRHGAAVQI 149
Score = 151 bits (324), Expect(4) = 6e-079
Identities = 68/96 (70%), Positives = 78/96 (81%)
Frame = +2 / -3
Query: 872 KAIFCTFSKYKPLNKLLRASIGPSLFHDWTKNTGRLIFFKNIKFRFLAERVVFGEEAADG 1051
+A +K K LNKLL A IGPSLFH+WTK+ G LIF ++IKF FLAE V+ GEEAADG
Sbjct: 739 RAFSAPSAKNKLLNKLLCARIGPSLFHNWTKDAG*LIFCQHIKFSFLAEXVILGEEAADG 560
Query: 1052 LAIDLARGEVDETLAVLGAVLDHWECIDEVAVDGVK 1159
LAIDLARGEVD+TLAVL AVLDH E +DEVAVDGV+
Sbjct: 559 LAIDLARGEVDQTLAVLRAVLDHRERVDEVAVDGVE 452
Score = 114 bits (243), Expect(3) = 6e-026
Identities = 59/131 (45%), Positives = 68/131 (51%)
Frame = -1 / +3
Query: 1260 TSRMTPGSRGSSRWPI*PSTWXXXXXXXXXXXXXXXXXXXXXSMHSQWSSTAPRTASVXX 1081
TSR TP SR SSRWPI* TW S S+WSSTA RTASV
Sbjct: 351 TSRTTPASRASSRWPI*R*TWRRSARRRTTTRGRSTPSTATSSTRSRWSSTARRTASV*S 530
Query: 1080 XXXXXXXXXXXXXXXXPKTTRSARNLNFMFLKKMSRPVFLVQS*NKDGPMLARSNLLRGL 901
P+ T SAR LNFM +KMS P LVQ *N+DGPM A+SNLLR L
Sbjct: 531 TSPRARSMARPSAASSPRITXSARKLNFMC*QKMSHPASLVQL*NRDGPMRAQSNLLRSL 710
Query: 900 YLLKVQKMALN 868
+ + + AL+
Sbjct: 711 FFAEGAEKALD 743
Score = 92.7 bits (196), Expect(4) = 2e-038
Identities = 42/70 (60%), Positives = 44/70 (62%)
Frame = -2 / +1
Query: 1256 QE*LQARGAHQDGRSDHQPGGYLHAGGXXXXXXXXXXXXXHRCTPSGQVLLREQQASHPL 1077
QE RG QDGRSD +PGG LHAGG HR P GQVLL E+QAS PL
Sbjct: 355 QERPPPRGPRQDGRSDDKPGGDLHAGGLQHAAARHHLQQLHRRAPGGQVLLGERQASDPL 534
Query: 1076 LHVRGLWQDH 1047
LHVRGLWQDH
Sbjct: 535 LHVRGLWQDH 564
Score = 68.4 bits (143), Expect(4) = 2e-038
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = -2 / +1
Query: 1010 GT*ILCS*RR*VALYFWSNRETKMVLCLREATY*EACIC*RCRKWP 873
G+*ILC+ RR*V L+ WSN ET+MVLC+R+ATY*EAC + +K P
Sbjct: 601 GS*ILCADRR*VTLHLWSNCETEMVLCVRKATY*EACFLLKAQKRP 738
Score = 34.5 bits (69), Expect(4) = e-131
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -3 / +3
Query: 916 LIERLVFAEGAENGLEFTIVRPFNWIGPR 830
L+ L FAEGAE L+FT R FN G +
Sbjct: 696 LLRSLFFAEGAEKALDFTNGRTFNLYGAK 782
Score = 34.1 bits (68), Expect(4) = e-131
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -3 / +3
Query: 787 PRVLACFSNNLLRREPLKLVDGGQSQRT 704
P VLA F+NN L R+PL+ G+SQ+T
Sbjct: 828 PGVLAWFNNNPLTRKPLEPFMAGRSQKT 911
Score = 30.4 bits (60), Expect(4) = 2e-038
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2 / +2
Query: 896 C*RCRKWP*IHNRETF*LDWAK 831
C*R RK P* H RE * W K
Sbjct: 716 C*RRRKGP*FHQRENL*FVWGK 781
Score = 29.9 bits (59), Expect(3) = 5e-058
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -2
Query: 1417 QSCRW*GARRSCRPDP 1464
+SCRW* A R RPDP
Sbjct: 194 RSCRW*AAPRRRRPDP 147
Score = 28.1 bits (55), Expect(3) = 4e-094
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -2
Query: 813 PGMKSILGPIQLKG 854
PG KSIL PIQ+KG
Sbjct: 800 PGKKSILCPIQIKG 759
Score = 25.8 bits (50), Expect(3) = 6e-026
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3 / +1
Query: 1618 RHRLLTRQAPLPRRTPCRGASRAH 1547
R R L RQ P PRR RAH
Sbjct: 262 RRRRLLRQDPPPRRPAAAPPRRAH 333
Score = 24.9 bits (48), Expect(4) = 2e-038
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1 / +1
Query: 795 RVCLGFWLASVTICSGESP*SL 730
R LGFWL TI E+P +L
Sbjct: 820 RGVLGFWLGLTTILLRENPLNL 885
Score = 24.9 bits (48), Expect(4) = 6e-079
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2 / -2
Query: 836 PNPIKRSHDCEFKAIFCTFSK 898
P IK S E K +FC FSK
Sbjct: 776 PIQIKGSPVGEIKGLFCAFSK 714
Score = 24.9 bits (48), Expect(3) = 4e-094
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3 / -3
Query: 702 KVL*D*PPSTSFKGSLRSRLLLKQAKTRG 788
KV D P +G L LLL QAKT G
Sbjct: 913 KVFWDLPAMKGSRGFLVRGLLLNQAKTPG 827
Score = 24.0 bits (46), Expect(4) = 6e-079
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1 / -1
Query: 703 RFSETDPHQQASRALSGADCY*SKPKPE 786
+FS P + S DC *+KPKP+
Sbjct: 912 KFSGIFPP*KVQGVFS*EDCC*TKPKPQ 829
Score = 22.6 bits (43), Expect(3) = 6e-026
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2 / +3
Query: 863 NRETF*LDWAKDGFHSW 813
N TF L AKDG SW
Sbjct: 750 NGRTFNLYGAKDGLLSW 800
Score = 22.6 bits (43), Expect(4) = e-131
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3 / +3
Query: 1585 PRRTPCRGASRAHSPSRATXTR 1520
P P R AHSPSR R
Sbjct: 18 PSPNPTRPDPHAHSPSRRGSDR 83
Score = 21.7 bits (41), Expect(3) = 5e-058
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1 / -1
Query: 1537 GTGNARGSLPGTGFSW 1584
GTGNARG W
Sbjct: 66 GTGNARGDRVWLDLGW 19
>gb|BU999262.1|BU999262 HI13P05r HI Hordeum vulgare subsp. vulgare cDNA clone HI13P05
5-PRIME, mRNA sequence
Length = 642
Score = 458 bits (995), Expect = e-128
Identities = 187/197 (94%), Positives = 190/197 (96%)
Frame = -3 / +3
Query: 1462 DLDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLAVDVYCDKIRHLVDPAPPHLAG 1283
DLDG +VAPLTICMIGAGGFIGSHLCEKLMAET+HVVLAVDVY DKIRHLVDP PPHLAG
Sbjct: 51 DLDGGAVAPLTICMIGAGGFIGSHLCEKLMAETQHVVLAVDVYSDKIRHLVDPPPPHLAG 230
Query: 1282 RISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 1103
RISFHRLNIKND RLEGL+KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS
Sbjct: 231 RISFHRLNIKNDPRLEGLVKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 410
Query: 1102 ENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYACA 923
EN KRLIHFSTCEVYGKTIGSFLPKDHPLRKE EFYVL EDESPCIFGPIVKQRWSYACA
Sbjct: 411 ENGKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLTEDESPCIFGPIVKQRWSYACA 590
Query: 922 KQLIERLVFAEGAENGL 872
KQLIERLVFAEGAENGL
Sbjct: 591 KQLIERLVFAEGAENGL 641
Score = 348 bits (755), Expect = 4e-095
Identities = 158/194 (81%), Positives = 163/194 (84%)
Frame = +3 / -3
Query: 873 RPFSAPSANTSLSISCFAQA*DHLCFTIGPKIQGDSSSLRT*NXXXXXXXXXXXXKLPMV 1052
RPFSAPSA TSLSISCFA A*DHLCFTIGPK+QGDSSS+ T*N KLPMV
Sbjct: 640 RPFSAPSAKTSLSISCFAHA*DHLCFTIGPKMQGDSSSVST*NSASLRRG*SLGRKLPMV 461
Query: 1053 LP*TSHVEKWMRRLLFSEQYLTTGSASMKLL*MVSRGRVL*SAGVQIAARLMVRSAILMS 1232
LP*TSHVEKW+RRL FSEQYLTTGSASMKLL*MVS GRVL*SAGVQIAAR +VRSAIL
Sbjct: 460 LP*TSHVEKWIRRLPFSEQYLTTGSASMKLL*MVSSGRVL*SAGVQIAARFIVRSAILTR 281
Query: 1233 PSSLESFLMLRRWKEMRPARCGGAGSTRWRILSQYTSTARTTWRVSAMSFSQRWEPMKPP 1412
PS SFLMLRRWKEMRPAR GG GSTRWRILS+ TSTARTT VSAMSFSQRWEPMKPP
Sbjct: 280 PSRRGSFLMLRRWKEMRPARWGGGGSTRWRILSE*TSTARTTCWVSAMSFSQRWEPMKPP 101
Query: 1413 APIMQMVRGATELP 1454
APIMQMV GAT P
Sbjct: 100 APIMQMVSGATAPP 59
Score = 232 bits (500), Expect(2) = 9e-062
Identities = 96/131 (73%), Positives = 100/131 (76%)
Frame = +1 / -1
Query: 871 QGHFLHLQQIQASQ*VASRKHRTIFVSRLDQKYRATHLL*EHKIQVPCGAGGLWGGSCRW 1050
QGHFL LQQ QASQ* A R HRTI VS+LDQ+ R THLL HKIQ+PCG G WGGSCRW
Sbjct: 642 QGHFLRLQQKQASQ*AALRTHRTISVSQLDQRCRVTHLLSAHKIQLPCGGGDPWGGSCRW 463
Query: 1051 SCHRPRTWRSG*DACCSRSST*PLGVHR*SCCRWCQGGECCSPPACR*PPG*WSDRPS** 1230
SCHRPRTWRSG DAC S SST*P G R*SCCRWC+ CCSPPACR PPG SDRPS*
Sbjct: 462 SCHRPRTWRSGSDACRSPSST*PPGARR*SCCRWCRAAACCSPPACRSPPGLSSDRPS*R 283
Query: 1231 APRAWSHS*C* 1263
PR S*C*
Sbjct: 282 GPRGGGRS*C* 250
Score = 171 bits (369), Expect(2) = 1e-081
Identities = 75/96 (78%), Positives = 83/96 (86%)
Frame = +2 / -2
Query: 872 KAIFCTFSKYKPLNKLLRASIGPSLFHDWTKNTGRLIFFKNIKFRFLAERVVFGEEAADG 1051
KAIFC FSK KPLNKLL A IGPSLFH+WTK+ G LIF ++IKF FLAE V+ GEEAADG
Sbjct: 641 KAIFCAFSKNKPLNKLLCARIGPSLFHNWTKDAG*LIFCQHIKFSFLAEGVILGEEAADG 462
Query: 1052 LAIDLARGEVDETLAVLGAVLDHWECIDEVAVDGVK 1159
LAIDLARGEVD+TLAVL AVLDH E +DEVAVDGV+
Sbjct: 461 LAIDLARGEVDQTLAVLRAVLDHRERVDEVAVDGVE 354
Score = 153 bits (328), Expect(2) = 1e-081
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = +2 / -2
Query: 1211 QIGHLDEPLEPGVILDVKAVEGDAPREVRRRGVDEVADLIAVYVDGEDDMARLGHELLAE 1390
QIGHLDE LE GV+LDV+AVEGDAP EV RR VDEVADL+ V VDGEDD+ LGHELLAE
Sbjct: 302 QIGHLDEALEAGVVLDVEAVEGDAPGEVGRRRVDEVADLVGVDVDGEDDVLGLGHELLAE 123
Query: 1391 VGADEAAGANHADGEGRDGVAVQI 1462
VGADEAAGA+HADGE R G AVQI
Sbjct: 122 VGADEAAGADHADGERRHGAAVQI 51
Score = 128 bits (274), Expect = 9e-029
Identities = 65/130 (50%), Positives = 72/130 (55%)
Frame = -1 / +1
Query: 1260 TSRMTPGSRGSSRWPI*PSTWXXXXXXXXXXXXXXXXXXXXXSMHSQWSSTAPRTASVXX 1081
TSR TP SR SSRWPI* TW S S+WSSTA RTASV
Sbjct: 253 TSRTTPASRASSRWPI*R*TWRRSARRRTTTRGRSTPSTATSSTRSRWSSTARRTASV*S 432
Query: 1080 XXXXXXXXXXXXXXXXPKTTRSARNLNFMFLKKMSRPVFLVQS*NKDGPMLARSNLLRGL 901
P+ T SAR LNFM +KMS P LVQ *N+DGPM A+S+LLRGL
Sbjct: 433 TSPRARSMARPSAASSPRITPSARKLNFMC*QKMSHPASLVQL*NRDGPMRAQSSLLRGL 612
Query: 900 YLLKVQKMAL 871
+LLK QKMAL
Sbjct: 613 FLLKAQKMAL 642
Score = 92.7 bits (196), Expect(3) = 3e-037
Identities = 42/70 (60%), Positives = 44/70 (62%)
Frame = -2 / +2
Query: 1256 QE*LQARGAHQDGRSDHQPGGYLHAGGXXXXXXXXXXXXXHRCTPSGQVLLREQQASHPL 1077
QE RG QDGRSD +PGG LHAGG HR P GQVLL E+QAS PL
Sbjct: 257 QERPPPRGPRQDGRSDDKPGGDLHAGGLQHAAARHHLQQLHRRAPGGQVLLGERQASDPL 436
Query: 1076 LHVRGLWQDH 1047
LHVRGLWQDH
Sbjct: 437 LHVRGLWQDH 466
Score = 81.3 bits (171), Expect(3) = 3e-037
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = -2 / +2
Query: 1010 GT*ILCS*RR*VALYFWSNRETKMVLCLREATY*EACIC*RCRKWP 873
G+*ILC+ RR*V L+ WSN ET+MVLC+R+A Y*EAC C*R RKWP
Sbjct: 503 GS*ILCADRR*VTLHLWSNCETEMVLCVRKAAY*EACFC*RRRKWP 640
Score = 29.9 bits (59), Expect(2) = 9e-062
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -1
Query: 1417 QSCRW*GARRSCRPDP 1464
+SCRW* A R RPDP
Sbjct: 96 RSCRW*AAPRRRRPDP 49
Score = 25.8 bits (50), Expect(3) = 3e-037
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3 / +2
Query: 1618 RHRLLTRQAPLPRRTPCRGASRAH 1547
R R L RQ P PRR RAH
Sbjct: 164 RRRRLLRQDPPPRRPAAAPPRRAH 235
>gb|BU995366.1|BU995366 HM10A14r HM Hordeum vulgare subsp. vulgare cDNA clone HM10A14
5-PRIME, mRNA sequence
Length = 633
Score = 444 bits (963), Expect(2) = e-125
Identities = 179/194 (92%), Positives = 189/194 (97%)
Frame = -3 / +1
Query: 1033 PKDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVR 854
P+DHPLRKE EFYVL EDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGL+FTIVR
Sbjct: 52 PQDHPLRKEAEFYVLTEDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLDFTIVR 231
Query: 853 PFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEA 674
PFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGG+SQRTFVYIKDAIEA
Sbjct: 232 PFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEA 411
Query: 673 VVLMIENPARANGHIFNVGNPNNEVTVRELAQMMTEVYANVSGEAPLDEPMIDVSSSQFY 494
V+LMIENPARANGHIFNVGNP+NEVTVRELA+MMTEVYA VSGE PL+EP+IDVS+ +FY
Sbjct: 412 VLLMIENPARANGHIFNVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVIDVSAKEFY 591
Query: 493 GEGYDDSDKRIPDM 452
GEGYDDSDKRIPDM
Sbjct: 592 GEGYDDSDKRIPDM 633
Score = 329 bits (713), Expect(2) = 6e-097
Identities = 135/196 (68%), Positives = 161/196 (82%)
Frame = +2 / -1
Query: 452 HVGDPLVAIIVSFAVELTRAHVNHGLIQRCLS*DICVDLCHHLGQLPNGNFIVRIPNIED 631
HVGDPLVA++V FAVE RAHV+H L+QR LS*D+ +DLCHH QLPN +FIVR+PN+E
Sbjct: 633 HVGDPLVAVVVPFAVEFFRAHVDHRLLQRGLS*DLSIDLCHHFSQLPNSDFIVRVPNVEY 454
Query: 632 VAIGSSRIFNHQHYSFDSILDVDKGSLRLTPINKLQGLSPEQIVTEASQNPRHTLARTID 811
+ IGSSR+FNHQ SF+ ILDV+K SL L I++LQGLS +IV EASQNPR+TLARTI+
Sbjct: 453 MTIGSSRVFNHQKNSFNGILDVNKSSLGLAAIDELQGLSA*EIVAEASQNPRNTLARTIN 274
Query: 812 TRNEIHPWPNPIKRSHDCEFKAIFCTFSKYKPLNKLLRASIGPSLFHDWTKNTGRLIFFK 991
RNE+HPWPNPI+RSHD E KAIFC FSK KPLNKLL A IGPSLFH+WTK+ G LIF +
Sbjct: 273 ARNEVHPWPNPIERSHDREIKAIFCAFSKNKPLNKLLCARIGPSLFHNWTKDAG*LIFCQ 94
Query: 992 NIKFRFLAERVVFGEE 1039
+IKF FLAE V+ G +
Sbjct: 93 HIKFSFLAEGVILGRK 46
Score = 292 bits (632), Expect(2) = 6e-082
Identities = 134/163 (82%), Positives = 138/163 (84%)
Frame = +3 / -2
Query: 513 TSIMGSSSGASPETFA*TSVIIWANSLTVTSLFGFPTLKMWPLARAGFXXXXXXXXXXXL 692
TSI GSSSG SPET A*TSVII ANSLTVTSL GFPTL + PLARAGF L
Sbjct: 572 TSITGSSSGGSPETLA*TSVIISANSLTVTSLSGFPTLNI*PLARAGFSIIRRTASMASL 393
Query: 693 M*TKVL*D*PPSTSFKGSLRSRLLLKQAKTRGTPSLGPSTPGMKSILGPIQLKGLTIVNS 872
M*TKVL D PPSTSF+GSLR RLLLKQAKTRGTPSLGPSTPGMKSILGPIQLKGLTIV S
Sbjct: 392 M*TKVLWDSPPSTSFRGSLRRRLLLKQAKTRGTPSLGPSTPGMKSILGPIQLKGLTIVKS 213
Query: 873 RPFSAPSANTSLSISCFAQA*DHLCFTIGPKIQGDSSSLRT*N 1001
RPFSAPSA TSLSISCFA A*DHLCFTIGPK+QGDSSS+ T*N
Sbjct: 212 RPFSAPSAKTSLSISCFAHA*DHLCFTIGPKMQGDSSSVST*N 84
Score = 249 bits (539), Expect = 2e-065
Identities = 130/192 (67%), Positives = 138/192 (71%)
Frame = -1 / +2
Query: 1029 KTTRSARNLNFMFLKKMSRPVFLVQS*NKDGPMLARSNLLRGLYLLKVQKMALNSQS*DL 850
+ T SAR LNFM +KMS P LVQ *N+DGPM A+S+LLRGL+LLK QKMAL S+S*DL
Sbjct: 56 RITPSARKLNFMC*QKMSHPASLVQL*NRDGPMRAQSSLLRGLFLLKAQKMALISRS*DL 235
Query: 849 LIGLGQGWISFLVSMVLARVCLGFWLASVTICSGESP*SLLMGVSLREPLSTSRMLSKL* 670
IGLGQGW SFL MVLARV LGFWLAS TI ESP*S M S RE L TSRM KL
Sbjct: 236 SIGLGQGWTSFLALMVLARVFLGFWLASATISYAESP*SSSMAASPRELLFTSRMPLKLF 415
Query: 669 C**LKILLEPMATSSMLGIRTMKLPLGSWPK**QRSTQMSQERHRWMSP*LT*ARVSSTA 490
**LK LLEPM S LG TMK LGSW K**QRS SQE RW S * T*AR +STA
Sbjct: 416 F**LKTLLEPMVIYSTLGTLTMKSLLGSWLK**QRSMLRSQESPRWRSL*ST*ARKNSTA 595
Query: 489 KDTMIATRGSPT 454
K T ATRGSPT
Sbjct: 596 KGTTTATRGSPT 631
Score = 231 bits (498), Expect(2) = 8e-062
Identities = 106/151 (70%), Positives = 117/151 (77%)
Frame = +1 / -3
Query: 571 SSFGPTP*R*LHCSDSQH*RCGHWLEQDFQSSALQLR*HP*CRQRFSETDPHQQASRALS 750
SSF PTP*+*LHC SQ * HWLEQ FQSS QL+ HP*C+Q+FS T H++AS AL
Sbjct: 514 SSFQPTP*Q*LHCQGSQR*IYDHWLEQGFQSSEEQLQWHP*CKQKFSGTRRHRRASGALC 335
Query: 751 GADCY*SKPKPEAHPR*DHRHQE*NPSLAQSN*KVSRL*IQGHFLHLQQIQASQ*VASRK 930
DC *SKPKPE HPR*DH+ QE*+PSLAQSN*KVSR * QGHFL LQQ QASQ* A R
Sbjct: 334 VGDCC*SKPKPEEHPR*DHQRQE*SPSLAQSN*KVSRS*NQGHFLRLQQKQASQ*AALRT 155
Query: 931 HRTIFVSRLDQKYRATHLL*EHKIQVPCGAG 1023
HRTI VS+LDQ+ R THLL HKIQ+PCG G
Sbjct: 154 HRTISVSQLDQRCRVTHLLSAHKIQLPCGGG 62
Score = 188 bits (406), Expect(3) = 7e-068
Identities = 78/110 (70%), Positives = 88/110 (80%)
Frame = -2 / +3
Query: 1010 GT*ILCS*RR*VALYFWSNRETKMVLCLREATY*EACIC*RCRKWP*IHNRETF*LDWAK 831
G+*ILC+ RR*V L+ WSN ET+MVLC+R+A Y*EAC C*R RKWP* H+RETF LDWAK
Sbjct: 75 GS*ILCADRR*VTLHLWSNCETEMVLCVRKAAY*EACFC*RRRKWP*FHDRETFQLDWAK 254
Query: 830 DGFHSWCRWS*RGCASGFGLLQ*QSAPERALEAC*WGSVSENLCLHQGCY 681
DG HSW WS*RGC+SGFGLLQ QS +RA EA W V EN CLHQGC+
Sbjct: 255 DGLHSWR*WS*RGCSSGFGLLQQQSPTQRAPEARRWRRVPENFCLHQGCH 404
Score = 69.8 bits (146), Expect(3) = 7e-068
Identities = 36/63 (57%), Positives = 40/63 (63%)
Frame = -2 / +3
Query: 641 QWPHLQCWESEQ*SYR*GVGPNDDRGLRKCLRRGTAG*AHD*RELESVLXXXXXXXRQED 462
QW ++Q WE Q*S+ *GVG NDDRGL LRR AG A D RE E +L RQED
Sbjct: 444 QWSYIQRWEP*Q*SHC*GVG*NDDRGLC*GLRRAPAGGACDRRERERILRRRVRRQRQED 623
Query: 461 PRH 453
PRH
Sbjct: 624 PRH 632
Score = 46.4 bits (95), Expect(2) = 6e-097
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1 / -2
Query: 1030 WGGSCRWSCHRPRT 1071
WGGSCRWSCHRPRT
Sbjct: 56 WGGSCRWSCHRPRT 15
Score = 39.1 bits (79), Expect(3) = 7e-068
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3 / +2
Query: 1069 CEVYGKTIGSFLPKDHPLRKEPEF 998
CEVYGKTIGSFLP+ P ++ F
Sbjct: 17 CEVYGKTIGSFLPRITPSARKLNF 88
Score = 33.6 bits (67), Expect(2) = 6e-082
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2 / -3
Query: 1031 GEEAADGLAIDLAR 1072
GEEAADGLAIDLAR
Sbjct: 55 GEEAADGLAIDLAR 14
Score = 27.6 bits (54), Expect(2) = 8e-062
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 1038 KLPMVLP*TSH 1070
KLPMVLP*TSH
Sbjct: 48 KLPMVLP*TSH 16
Score = 25.4 bits (49), Expect(2) = e-125
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 1070 VRGLWQDH 1047
VRGLWQDH
Sbjct: 16 VRGLWQDH 39
>gb|BI958534.1|BI958534 HVSMEn0015H18f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0015H18f,
mRNA sequence
Length = 571
Score = 309 bits (669), Expect(2) = e-121
Identities = 125/131 (95%), Positives = 128/131 (97%)
Frame = -3 / +2
Query: 1042 SFLPKDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFT 863
SFLPKDHPLRKE EFYVL EDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGL+FT
Sbjct: 179 SFLPKDHPLRKEAEFYVLTEDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLDFT 358
Query: 862 IVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDA 683
IVRPFNWIGPRMDFIPGVDGPSEGVPRVLACF NNLLRREPLKLVDGG+SQRTFVYIKDA
Sbjct: 359 IVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFXNNLLRREPLKLVDGGESQRTFVYIKDA 538
Query: 682 IEAVVLMIENP 650
IEAV+LMIENP
Sbjct: 539 IEAVLLMIENP 571
Score = 222 bits (480), Expect(2) = 9e-087
Identities = 93/131 (70%), Positives = 108/131 (82%)
Frame = +2 / -1
Query: 650 RIFNHQHYSFDSILDVDKGSLRLTPINKLQGLSPEQIVTEASQNPRHTLARTIDTRNEIH 829
R+FNHQ SF+ ILDV+K SL L I++LQGLS +IV EASQNPR+TLARTI+ RNE+H
Sbjct: 571 RVFNHQKNSFNGILDVNKSSLGLAAIDELQGLSA*EIVXEASQNPRNTLARTINARNEVH 392
Query: 830 PWPNPIKRSHDCEFKAIFCTFSKYKPLNKLLRASIGPSLFHDWTKNTGRLIFFKNIKFRF 1009
PWPNPI+RSHD E KAIFC FSK KPLNKLL A IGPSLFH+WTK+ G LIF ++IKF F
Sbjct: 391 PWPNPIERSHDREIKAIFCAFSKNKPLNKLLCARIGPSLFHNWTKDAG*LIFCQHIKFSF 212
Query: 1010 LAERVVFGEEA 1042
LAE V+ GEEA
Sbjct: 211 LAEGVILGEEA 179
Score = 213 bits (460), Expect(2) = 3e-082
Identities = 95/117 (81%), Positives = 98/117 (83%)
Frame = +3 / -2
Query: 651 GFXXXXXXXXXXXLM*TKVL*D*PPSTSFKGSLRSRLLLKQAKTRGTPSLGPSTPGMKSI 830
GF LM*TKVL D PPSTSF+GSLR RLL KQAKTRGTPSLGPSTPGMKSI
Sbjct: 570 GFSIIRRTASMASLM*TKVLWDSPPSTSFRGSLRRRLLXKQAKTRGTPSLGPSTPGMKSI 391
Query: 831 LGPIQLKGLTIVNSRPFSAPSANTSLSISCFAQA*DHLCFTIGPKIQGDSSSLRT*N 1001
LGPIQLKGLTIV SRPFSAPSA TSLSISCFA A*DHLCFTIGPK+QGDSSS+ T*N
Sbjct: 390 LGPIQLKGLTIVKSRPFSAPSAKTSLSISCFAHA*DHLCFTIGPKMQGDSSSVST*N 220
Score = 198 bits (426), Expect(2) = 7e-067
Identities = 90/129 (69%), Positives = 100/129 (77%)
Frame = +1 / -3
Query: 655 FQSSALQLR*HP*CRQRFSETDPHQQASRALSGADCY*SKPKPEAHPR*DHRHQE*NPSL 834
FQSS QL+ HP*C+Q+F T H++AS AL DC *SKPKPE HPR*DH+ QE*+PSL
Sbjct: 566 FQSSEEQLQWHP*CKQKFFGTRRHRRASGALCVGDCX*SKPKPEEHPR*DHQRQE*SPSL 387
Query: 835 AQSN*KVSRL*IQGHFLHLQQIQASQ*VASRKHRTIFVSRLDQKYRATHLL*EHKIQVPC 1014
AQSN*KVSR * QGHFL LQQ QASQ* A R HRTI VS+LDQ+ R THLL HKIQ+PC
Sbjct: 386 AQSN*KVSRS*NQGHFLRLQQKQASQ*AALRTHRTISVSQLDQRCRVTHLLSAHKIQLPC 207
Query: 1015 GAGGLWGGS 1041
G G WGGS
Sbjct: 206 GGGDPWGGS 180
Score = 184 bits (396), Expect(2) = 2e-063
Identities = 76/110 (69%), Positives = 87/110 (79%)
Frame = -2 / +1
Query: 1010 GT*ILCS*RR*VALYFWSNRETKMVLCLREATY*EACIC*RCRKWP*IHNRETF*LDWAK 831
G+*ILC+ RR*V L+ WSN ET+MVLC+R+A Y*EAC C*R RKWP* H+RETF LDWAK
Sbjct: 211 GS*ILCADRR*VTLHLWSNCETEMVLCVRKAAY*EACFC*RRRKWP*FHDRETFQLDWAK 390
Query: 830 DGFHSWCRWS*RGCASGFGLLQ*QSAPERALEAC*WGSVSENLCLHQGCY 681
DG HSW WS*RGC+SGFGLL QS +RA EA W V +N CLHQGC+
Sbjct: 391 DGLHSWR*WS*RGCSSGFGLLXQQSPTQRAPEARRWRRVPKNFCLHQGCH 540
Score = 167 bits (359), Expect(2) = 4e-044
Identities = 85/125 (68%), Positives = 93/125 (74%)
Frame = -1 / +3
Query: 1029 KTTRSARNLNFMFLKKMSRPVFLVQS*NKDGPMLARSNLLRGLYLLKVQKMALNSQS*DL 850
+ T SAR LNFM +KMS P LVQ *N+DGPM A+S+LLRGL+LLK QKMAL S+S*DL
Sbjct: 192 RITPSARKLNFMC*QKMSHPASLVQL*NRDGPMRAQSSLLRGLFLLKAQKMALISRS*DL 371
Query: 849 LIGLGQGWISFLVSMVLARVCLGFWLASVTICSGESP*SLLMGVSLREPLSTSRMLSKL* 670
IGLGQGW SFL MVLARV LGFWLAS TI ESP*S M S +E L TSRM KL
Sbjct: 372 SIGLGQGWTSFLALMVLARVFLGFWLASXTISYAESP*SSSMAASPKELLFTSRMPLKLF 551
Query: 669 C**LK 655
**LK
Sbjct: 552 F**LK 566
Score = 147 bits (315), Expect(2) = e-121
Identities = 59/67 (88%), Positives = 60/67 (89%)
Frame = -3 / +1
Query: 1219 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGS 1040
ADLTINLA ICTPADYNTRPLDTIYSNFIDALPVVKYCSEN KRLIHFSTCEVYGKTIG
Sbjct: 1 ADLTINLAGICTPADYNTRPLDTIYSNFIDALPVVKYCSENGKRLIHFSTCEVYGKTIGE 180
Query: 1039 FLPKDHP 1019
P+ P
Sbjct: 181 LPPQGSP 201
Score = 119 bits (254), Expect(2) = 9e-087
Identities = 45/58 (77%), Positives = 46/58 (79%)
Frame = +1 / -1
Query: 1045 RWSCHRPRTWRSG*DACCSRSST*PLGVHR*SCCRWCQGGECCSPPACR*PPG*WSDR 1218
RWSCHRPRTWRSG DAC S SST*P G R*SCCRWC+ CCSPPACR PPG SDR
Sbjct: 175 RWSCHRPRTWRSGSDACRSPSST*PPGARR*SCCRWCRAAACCSPPACRSPPGLSSDR 2
Score = 113 bits (241), Expect(2) = 3e-082
Identities = 52/58 (89%), Positives = 54/58 (93%)
Frame = +3 / -3
Query: 1044 PMVLP*TSHVEKWMRRLLFSEQYLTTGSASMKLL*MVSRGRVL*SAGVQIAARLMVRS 1217
PMVLP*TSHVEKW+RRL FSEQYLTTGSASMKLL*MVS GRVL*SAGVQI AR +VRS
Sbjct: 176 PMVLP*TSHVEKWIRRLPFSEQYLTTGSASMKLL*MVSSGRVL*SAGVQIPARFIVRS 3
Score = 79.9 bits (168), Expect(2) = 2e-063
Identities = 35/57 (61%), Positives = 37/57 (64%)
Frame = -2 / +3
Query: 1217 RSDHQPGGYLHAGGXXXXXXXXXXXXXHRCTPSGQVLLREQQASHPLLHVRGLWQDH 1047
RSD +PGG LHAGG HR P GQVLL E+QAS PLLHVRGLWQDH
Sbjct: 3 RSDDKPGGDLHAGGLQHAAARHHLQQLHRRAPGGQVLLGERQASDPLLHVRGLWQDH 173
Score = 77.6 bits (163), Expect(2) = 7e-067
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +2 / -2
Query: 1031 GEEAADGLAIDLARGEVDETLAVLGAVLDHWECIDEVAVDGVK 1159
G + ADGLAIDLARGEVD+TLAVL AVLDH E +DEVAVDGV+
Sbjct: 189 GRKLADGLAIDLARGEVDQTLAVLRAVLDHRERVDEVAVDGVE 61
Score = 32.2 bits (64), Expect(2) = 4e-044
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -1 / +2
Query: 1218 PI*PSTWXXXXXXXXXXXXXXXXXXXXXSMHSQWSSTAPRTASV 1087
PI* TW S S+WSSTA RTASV
Sbjct: 2 PI*R*TWRGSARRRTTTRGRSTPSTATSSTRSRWSSTARRTASV 133
>gb|BJ463324.1|BJ463324 BJ463324 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags26p10 5', mRNA sequence
Length = 595
Score = 433 bits (940), Expect = e-120
Identities = 176/190 (92%), Positives = 185/190 (97%)
Frame = -3 / +1
Query: 1063 VYGKTIGSFLPKDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYACAKQLIERLVFAEGA 884
VYGKTIGSFLPKDHPLRKE EFYVL EDESPCIFGPIVKQRWSYACAKQLIERLVFAEGA
Sbjct: 25 VYGKTIGSFLPKDHPLRKEAEFYVLTEDESPCIFGPIVKQRWSYACAKQLIERLVFAEGA 204
Query: 883 ENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRT 704
ENGL+FTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGG+SQRT
Sbjct: 205 ENGLDFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGESQRT 384
Query: 703 FVYIKDAIEAVVLMIENPARANGHIFNVGNPNNEVTVRELAQMMTEVYANVSGEAPLDEP 524
FVYIKDAIEAV+LMIENPARANGHIFNVGNP+NEVTVRELA+MMTEVYA VSGE PL+EP
Sbjct: 385 FVYIKDAIEAVLLMIENPARANGHIFNVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEP 564
Query: 523 MIDVSSSQFY 494
+IDVS+ +FY
Sbjct: 565 VIDVSAKEFY 594
Score = 323 bits (699), Expect = 2e-087
Identities = 133/190 (70%), Positives = 156/190 (82%)
Frame = +2 / -2
Query: 494 VELTRAHVNHGLIQRCLS*DICVDLCHHLGQLPNGNFIVRIPNIEDVAIGSSRIFNHQHY 673
VE R HV+H L+QR LS*D+ +DLCHH QLPN +FIVR+PN+ED+ IGSSR+FNHQ
Sbjct: 594 VEFFRTHVDHRLLQRGLS*DLSIDLCHHFSQLPNSDFIVRVPNVEDMTIGSSRVFNHQKN 415
Query: 674 SFDSILDVDKGSLRLTPINKLQGLSPEQIVTEASQNPRHTLARTIDTRNEIHPWPNPIKR 853
SF+ ILDV+K SL L IN+LQGLS +IV EASQNPR+TLARTI+ RNE+HPWPNPI+R
Sbjct: 414 SFNGILDVNKSSLGLAAINELQGLSA*EIVAEASQNPRNTLARTINARNEVHPWPNPIER 235
Query: 854 SHDCEFKAIFCTFSKYKPLNKLLRASIGPSLFHDWTKNTGRLIFFKNIKFRFLAERVVFG 1033
SH+ E KAIFC FSK KP NKLL A IGPSLFH+WTK+ G LIF ++IKF FLAE V+ G
Sbjct: 234 SHNREIKAIFCAFSKNKPFNKLLCARIGPSLFHNWTKDAG*LIFCQHIKFSFLAEGVILG 55
Query: 1034 EEAADGLAID 1063
EEAADGLAID
Sbjct: 54 EEAADGLAID 25
Score = 309 bits (669), Expect = 3e-083
Identities = 144/184 (78%), Positives = 148/184 (80%)
Frame = +3 / -3
Query: 513 TSIMGSSSGASPETFA*TSVIIWANSLTVTSLFGFPTLKMWPLARAGFXXXXXXXXXXXL 692
TSI GSSSG SPET A*TSVII ANSLTVTSL GFPTLK+ PLARAGF L
Sbjct: 575 TSITGSSSGGSPETLA*TSVIISANSLTVTSLSGFPTLKI*PLARAGFSIIKRTASMASL 396
Query: 693 M*TKVL*D*PPSTSFKGSLRSRLLLKQAKTRGTPSLGPSTPGMKSILGPIQLKGLTIVNS 872
M*TKVL D PPSTSF+GSLR RLLLKQAKTRGTPSLGPSTPGMKSILGPIQLKGLTIV S
Sbjct: 395 M*TKVLWDSPPSTSFRGSLRKRLLLKQAKTRGTPSLGPSTPGMKSILGPIQLKGLTIVKS 216
Query: 873 RPFSAPSANTSLSISCFAQA*DHLCFTIGPKIQGDSSSLRT*NXXXXXXXXXXXXKLPMV 1052
RPFSAPSA TSLSISCFA A*DHLCFTIGPK+QGDSSS+ T*N KLPMV
Sbjct: 215 RPFSAPSAKTSLSISCFAHA*DHLCFTIGPKMQGDSSSVST*NSASLRRG*SLGRKLPMV 36
Query: 1053 LP*T 1064
LP*T
Sbjct: 35 LP*T 24
Score = 268 bits (580), Expect = 5e-071
Identities = 118/165 (71%), Positives = 129/165 (78%)
Frame = +1 / -1
Query: 571 SSFGPTP*R*LHCSDSQH*RCGHWLEQDFQSSALQLR*HP*CRQRFSETDPHQQASRALS 750
SSF PTP*+*LHC SQ *R HWLEQ FQSS QL+ HP*C+Q+FS T HQ+AS AL
Sbjct: 517 SSFQPTP*Q*LHCQGSQR*RYDHWLEQGFQSSKEQLQWHP*CKQKFSGTRRHQRASGALC 338
Query: 751 GADCY*SKPKPEAHPR*DHRHQE*NPSLAQSN*KVSRL*IQGHFLHLQQIQASQ*VASRK 930
DC *SKPKPE HPR*DH+ QE*+PSLAQSN*KVS+ * QGHFL LQQ QA Q* A R
Sbjct: 337 VRDCC*SKPKPEEHPR*DHQRQE*SPSLAQSN*KVSQS*NQGHFLRLQQKQAFQ*AALRT 158
Query: 931 HRTIFVSRLDQKYRATHLL*EHKIQVPCGAGGLWGGSCRWSCHRP 1065
HRTI VS+LDQ+ R THLL HKIQ+PCG G WGGSCRWSCHRP
Sbjct: 157 HRTISVSQLDQRCRVTHLLSAHKIQLPCGGGDPWGGSCRWSCHRP 23
Score = 227 bits (491), Expect = 1e-058
Identities = 119/179 (66%), Positives = 128/179 (71%)
Frame = -1 / +2
Query: 1029 KTTRSARNLNFMFLKKMSRPVFLVQS*NKDGPMLARSNLLRGLYLLKVQKMALNSQS*DL 850
+ T SAR LNFM +KMS P LVQ *N+DGPM A+S+LL+GL+LLK QKMAL S+ *DL
Sbjct: 59 RITPSARKLNFMC*QKMSHPASLVQL*NRDGPMRAQSSLLKGLFLLKAQKMALISRL*DL 238
Query: 849 LIGLGQGWISFLVSMVLARVCLGFWLASVTICSGESP*SLLMGVSLREPLSTSRMLSKL* 670
IGLGQGW SFL MVLARV LGFWLAS TI ESP*S LM S RE L TSRM KL
Sbjct: 239 SIGLGQGWTSFLALMVLARVFLGFWLASATISYAESP*SSLMAASPRELLFTSRMPLKLF 418
Query: 669 C**LKILLEPMATSSMLGIRTMKLPLGSWPK**QRSTQMSQERHRWMSP*LT*ARVSST 493
**LK LLEPM SS LG TMK LGSW K**QRS SQE RW S * T* R +ST
Sbjct: 419 F**LKTLLEPMVISSTLGTLTMKSLLGSWLK**QRSMLRSQESPRWRSL*ST*VRKNST 595
Score = 185 bits (399), Expect(2) = 2e-057
Identities = 77/110 (70%), Positives = 88/110 (80%)
Frame = -2 / +3
Query: 1010 GT*ILCS*RR*VALYFWSNRETKMVLCLREATY*EACIC*RCRKWP*IHNRETF*LDWAK 831
G+*ILC+ RR*V L+ WSN ET+MVLC+R+A Y*+AC C*R RKWP* H+ ETF LDWAK
Sbjct: 78 GS*ILCADRR*VTLHLWSNCETEMVLCVRKAAY*KACFC*RRRKWP*FHDCETFQLDWAK 257
Query: 830 DGFHSWCRWS*RGCASGFGLLQ*QSAPERALEAC*WGSVSENLCLHQGCY 681
DG HSW WS*RGC+SGFGLLQ QS +RA EA *W V EN CLHQGC+
Sbjct: 258 DGLHSWR*WS*RGCSSGFGLLQQQSLTQRAPEAR*WRRVPENFCLHQGCH 407
Score = 58.3 bits (121), Expect(2) = 2e-057
Identities = 30/49 (61%), Positives = 33/49 (67%)
Frame = -2 / +3
Query: 641 QWPHLQCWESEQ*SYR*GVGPNDDRGLRKCLRRGTAG*AHD*RELESVL 495
QW +LQ WE Q*S+ *GVG NDDRGL LRR AG A D RE E +L
Sbjct: 447 QWSYLQRWEP*Q*SHC*GVG*NDDRGLC*GLRRAPAGGACDRRECERIL 593
>gb|BI960436.1|BI960436 HVSMEn0024J13f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0024J13f,
mRNA sequence
Length = 660
Score = 393 bits (852), Expect(2) = e-109
Identities = 159/170 (93%), Positives = 163/170 (95%)
Frame = -3 / +2
Query: 1462 DLDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLAVDVYCDKIRHLVDPAPPHLAG 1283
DLDG +VAPLTICMIGAGGFIGSHLCEKLMAET+HVVLAVDVY DKIRHLVDP PPHLAG
Sbjct: 149 DLDGGAVAPLTICMIGAGGFIGSHLCEKLMAETQHVVLAVDVYSDKIRHLVDPPPPHLAG 328
Query: 1282 RISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 1103
RISFHRLNIKND RLEGL+KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS
Sbjct: 329 RISFHRLNIKNDPRLEGLVKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 508
Query: 1102 ENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEPEFYVLKEDESPCIFGPI 953
EN KRLIHFSTCEVYGKTIGSFLPKDHPLR+E EFYVL EDESPCIFGPI
Sbjct: 509 ENGKRLIHFSTCEVYGKTIGSFLPKDHPLRREAEFYVLTEDESPCIFGPI 658
Score = 292 bits (632), Expect = 4e-078
Identities = 134/168 (79%), Positives = 139/168 (82%)
Frame = +3 / -1
Query: 951 TIGPKIQGDSSSLRT*NXXXXXXXXXXXXKLPMVLP*TSHVEKWMRRLLFSEQYLTTGSA 1130
TIGPK+QGDSSS+ T*N KLPMVLP*TSHVEKW+RRL FSEQYLTTGSA
Sbjct: 660 TIGPKMQGDSSSVST*NSASLRRG*SLGRKLPMVLP*TSHVEKWIRRLPFSEQYLTTGSA 481
Query: 1131 SMKLL*MVSRGRVL*SAGVQIAARLMVRSAILMSPSSLESFLMLRRWKEMRPARCGGAGS 1310
SMKLL*MVS GRVL*SAGVQIAAR +VRSAIL PS SFLMLRRWKEMRPAR GG GS
Sbjct: 480 SMKLL*MVSSGRVL*SAGVQIAARFIVRSAILTRPSRRGSFLMLRRWKEMRPARWGGGGS 301
Query: 1311 TRWRILSQYTSTARTTWRVSAMSFSQRWEPMKPPAPIMQMVRGATELP 1454
TRWRILS+ TSTARTT VSAMSFSQRWEPMKPPAPIMQMV GAT P
Sbjct: 300 TRWRILSE*TSTARTTCWVSAMSFSQRWEPMKPPAPIMQMVSGATAPP 157
Score = 189 bits (407), Expect(2) = 5e-049
Identities = 75/104 (72%), Positives = 79/104 (75%)
Frame = +1 / -2
Query: 952 RLDQKYRATHLL*EHKIQVPCGAGGLWGGSCRWSCHRPRTWRSG*DACCSRSST*PLGVH 1131
+LDQ+ R THLL HKIQ+PCG G WGGSCRWSCHRPRTWRSG DAC S SST*P G
Sbjct: 659 QLDQRCRVTHLLSAHKIQLPCGGGDPWGGSCRWSCHRPRTWRSGSDACRSPSST*PPGAR 480
Query: 1132 R*SCCRWCQGGECCSPPACR*PPG*WSDRPS**APRAWSHS*C* 1263
R*SCCRWC+ CCSPPACR PPG SDRPS* PR S*C*
Sbjct: 479 R*SCCRWCRAAACCSPPACRSPPGLSSDRPS*RGPRGGGRS*C* 348
Score = 153 bits (328), Expect(2) = 6e-065
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = +2 / -3
Query: 1211 QIGHLDEPLEPGVILDVKAVEGDAPREVRRRGVDEVADLIAVYVDGEDDMARLGHELLAE 1390
QIGHLDE LE GV+LDV+AVEGDAP EV RR VDEVADL+ V VDGEDD+ LGHELLAE
Sbjct: 400 QIGHLDEALEAGVVLDVEAVEGDAPGEVGRRRVDEVADLVGVDVDGEDDVLGLGHELLAE 221
Query: 1391 VGADEAAGANHADGEGRDGVAVQI 1462
VGADEAAGA+HADGE R G AVQI
Sbjct: 220 VGADEAAGADHADGERRHGAAVQI 149
Score = 116 bits (247), Expect(2) = 6e-065
Identities = 51/69 (73%), Positives = 59/69 (85%)
Frame = +2 / -3
Query: 953 DWTKNTGRLIFFKNIKFRFLAERVVFGEEAADGLAIDLARGEVDETLAVLGAVLDHWECI 1132
+WTK+ G LIF ++IKF F AE V+ GEEAADGLAIDLARGEVD+TLAVL AVLDH E +
Sbjct: 658 NWTKDAG*LIFCQHIKFSFPAEGVILGEEAADGLAIDLARGEVDQTLAVLRAVLDHRERV 479
Query: 1133 DEVAVDGVK 1159
DEVAVDGV+
Sbjct: 478 DEVAVDGVE 452
Score = 92.7 bits (196), Expect(3) = 1e-022
Identities = 42/70 (60%), Positives = 44/70 (62%)
Frame = -2 / +1
Query: 1256 QE*LQARGAHQDGRSDHQPGGYLHAGGXXXXXXXXXXXXXHRCTPSGQVLLREQQASHPL 1077
QE RG QDGRSD +PGG LHAGG HR P GQVLL E+QAS PL
Sbjct: 355 QERPPPRGPRQDGRSDDKPGGDLHAGGLQHAAARHHLQQLHRRAPGGQVLLGERQASDPL 534
Query: 1076 LHVRGLWQDH 1047
LHVRGLWQDH
Sbjct: 535 LHVRGLWQDH 564
Score = 32.2 bits (64), Expect(3) = 1e-022
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2 / +1
Query: 1010 GT*ILCS*RR*VALYFWSN 954
G+*ILC+ RR*V L+ WSN
Sbjct: 601 GS*ILCADRR*VTLHLWSN 657
Score = 29.9 bits (59), Expect(2) = 5e-049
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -2
Query: 1417 QSCRW*GARRSCRPDP 1464
+SCRW* A R RPDP
Sbjct: 194 RSCRW*AAPRRRRPDP 147
Score = 25.8 bits (50), Expect(3) = 1e-022
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3 / +1
Query: 1618 RHRLLTRQAPLPRRTPCRGASRAH 1547
R R L RQ P PRR RAH
Sbjct: 262 RRRRLLRQDPPPRRPAAAPPRRAH 333
Score = 23.1 bits (44), Expect(2) = e-109
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3 / +3
Query: 1579 RTPCRGASRAHSPSRATXTR 1520
R P R AHSPSR R
Sbjct: 24 RNPTRPDPHAHSPSRRGSDR 83
>gb|BE456081.2|BE456081 HVSMEg0019L02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019L02f, mRNA sequence
Length = 876
Score = 372 bits (806), Expect(3) = e-106
Identities = 159/208 (76%), Positives = 171/208 (82%)
Frame = -3 / +3
Query: 1462 DLDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLAVDVYCDKIRHLVDPAPPHLAG 1283
DLDG +VAPLTICMIGAGGFIGSHLCEKLMAET+HVVLAVDVY DKIRHLVDP P HLAG
Sbjct: 180 DLDGGAVAPLTICMIGAGGFIGSHLCEKLMAETQHVVLAVDVYSDKIRHLVDPPPSHLAG 359
Query: 1282 RISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 1103
RI FHRLNIKND RLEGL+KMADLTINLAAICTPADYNTR LDTIYSNFIDALPVVKYCS
Sbjct: 360 RIFFHRLNIKNDPRLEGLVKMADLTINLAAICTPADYNTRALDTIYSNFIDALPVVKYCS 539
Query: 1102 ENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYACA 923
E +RLIHF TCEVYG+TIGSFLP+D P K EFYVL EDE +F VKQR Y
Sbjct: 540 EKRQRLIHFFTCEVYGQTIGSFLPQDQPPPKGAEFYVLTEDEITLLFCSNVKQRMVYCGP 719
Query: 922 KQLIERLVFAEGAENGLEFTIVRPFNWI 839
K+LIE++ FA G + G FTI R F +
Sbjct: 720 KELIEKVGFAGGPQKGPWFTIGRTFQLV 803
Score = 282 bits (610), Expect(2) = 3e-079
Identities = 136/202 (67%), Positives = 146/202 (72%)
Frame = +3 / -3
Query: 849 KGLTIVNSRPFSAPSANTSLSISCFAQA*DHLCFTIGPKIQGDSSSLRT*NXXXXXXXXX 1028
K L +VN PF P A + SIS * LCFT+ K + SSS+ T*N
Sbjct: 793 KVLPMVNQGPFWGPPAKPTFSISSLGPQ*TILCFTLEQKSKVISSSVST*NSAPFGGG*S 614
Query: 1029 XXXKLPMVLP*TSHVEKWMRRLLFSEQYLTTGSASMKLL*MVSRGRVL*SAGVQIAARLM 1208
KLPMV P*TSHV+KW+ R FSEQYLTTGSASMKLL*MVS RVL*SAGVQIAAR +
Sbjct: 613 WGRKLPMVCP*TSHVKKWINRCRFSEQYLTTGSASMKLL*MVSSARVL*SAGVQIAARFI 434
Query: 1209 VRSAILMSPSSLESFLMLRRWKEMRPARCGGAGSTRWRILSQYTSTARTTWRVSAMSFSQ 1388
VRSAIL PS SFLMLRRWK+MRPAR G GSTRWRILS+ TSTARTT VSAMSFSQ
Sbjct: 433 VRSAILTRPSRRGSFLMLRRWKKMRPARWDGGGSTRWRILSE*TSTARTTCWVSAMSFSQ 254
Query: 1389 RWEPMKPPAPIMQMVRGATELP 1454
RWEPMKPPAPIMQMV GAT P
Sbjct: 253 RWEPMKPPAPIMQMVSGATAPP 188
Score = 144 bits (309), Expect(2) = 2e-059
Identities = 64/84 (76%), Positives = 70/84 (83%)
Frame = +2 / -2
Query: 1211 QIGHLDEPLEPGVILDVKAVEGDAPREVRRRGVDEVADLIAVYVDGEDDMARLGHELLAE 1390
QIGHLDE LE GV+LDV+AVE DAP +V RR V EVADL+ V VDGEDD+ LGHELLAE
Sbjct: 431 QIGHLDEALEAGVVLDVEAVEEDAPGKVGRRRVXEVADLVGVDVDGEDDVLGLGHELLAE 252
Query: 1391 VGADEAAGANHADGEGRDGVAVQI 1462
VGADEAAGA+HADGE R G AVQI
Sbjct: 251 VGADEAAGADHADGERRHGAAVQI 180
Score = 118 bits (253), Expect(4) = 3e-035
Identities = 51/75 (68%), Positives = 52/75 (69%)
Frame = +1 / -1
Query: 1039 SCRWSCHRPRTWRSG*DACCSRSST*PLGVHR*SCCRWCQGGECCSPPACR*PPG*WSDR 1218
SCRWS HRPRT RSG A S SST*P R*SCCRWC+ CCSPPACR PPG SDR
Sbjct: 603 SCRWSAHRPRT*RSGSTAAVSPSST*PREARR*SCCRWCRAPACCSPPACRSPPGLSSDR 424
Query: 1219 PS**APRAWSHS*C* 1263
PS* PR S*C*
Sbjct: 423 PS*RGPRGGGRS*C* 379
Score = 106 bits (227), Expect(2) = 4e-023
Identities = 59/136 (43%), Positives = 69/136 (50%)
Frame = -2 / +2
Query: 1256 QE*LQARGAHQDGRSDHQPGGYLHAGGXXXXXXXXXXXXXHRCTPSGQVLLREQQASHPL 1077
QE RG QDGRSD +PGG LHAGG HR GQVLL E A PL
Sbjct: 386 QERPPPRGPRQDGRSDDKPGGDLHAGGLQHAGARHHLQQLHRRASRGQVLLGETAAVDPL 565
Query: 1076 LHVRGLWQDHXXXXXXXXXXXQGT*ILCS*RR*VALYFWSNRETKMVLCLREATY*EACI 897
LHVRGLW DH +G+*ILC+ RR* L ET+ L + TY*+
Sbjct: 566 LHVRGLWADHRQLSSPGSTPSEGS*ILCADRR*DNLALLFQCETENGLLRAQRTY*KGWF 745
Query: 896 C*RCRKWP*IHNRETF 849
C R K +++RE F
Sbjct: 746 CWRAPKGALVYHRENF 793
Score = 105 bits (225), Expect(2) = 2e-059
Identities = 53/108 (49%), Positives = 67/108 (62%)
Frame = +2 / -2
Query: 836 PNPIKRSHDCEFKAIFCTFSKYKPLNKLLRASIGPSLFHDWTKNTGRLIFFKNIKFRFLA 1015
PN +K S D + + SK NK +I SLFH TK G LIF ++IKF L
Sbjct: 806 PNQLKSSPDGKPGPLLGPSSKTNLFNKFFGPAIDHSLFHIGTKEQGYLIFCQHIKFSSLR 627
Query: 1016 ERVVFGEEAADGLAIDLARGEVDETLAVLGAVLDHWECIDEVAVDGVK 1159
++ G++AADGL IDLAR EVD+ L L AVLDH + +DEVAVDGV+
Sbjct: 626 RGLILGKKAADGLPIDLAREEVDQPLPFLRAVLDHGKRVDEVAVDGVE 483
Score = 73.9 bits (155), Expect(2) = 2e-021
Identities = 33/89 (37%), Positives = 46/89 (51%)
Frame = -3 / +1
Query: 1057 GKTIGSFLPKDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAEN 878
G+ +F P+ +PLR+E F ++ PC F P+ + WS A K L++RLV EG +
Sbjct: 586 GRPSAAFFPRINPLRRELNFMC*QKMR*PCSFVPM*NREWSIAGPKNLLKRLVLLEGPKR 765
Query: 877 GLEFTIVRPFNWIGPRMDFIPGVDGPSEG 791
G FNW G +M I G DG G
Sbjct: 766 GPGLPSGELFNWFGAKMGLISGADGAHPG 852
Score = 49.2 bits (101), Expect(2) = 2e-021
Identities = 24/57 (42%), Positives = 24/57 (42%)
Frame = -1 / +1
Query: 1260 TSRMTPGSRGSSRWPI*PSTWXXXXXXXXXXXXXXXXXXXXXSMHSQWSSTAPRTAS 1090
TSR TP SR SSRWPI* TW S WSSTA R S
Sbjct: 382 TSRTTPASRASSRWPI*R*TWRRSARRRTTTRGRSTPSTATSSTRFPWSSTARRNGS 552
Score = 42.8 bits (87), Expect(4) = 3e-035
Identities = 24/54 (44%), Positives = 32/54 (59%)
Frame = +1 / -1
Query: 850 KVSRL*IQGHFLHLQQIQASQ*VASRKHRTIFVSRLDQKYRATHLL*EHKIQVP 1011
K SR * + F LQQ Q Q*V ++R VS +++ R +HLL HKIQ+P
Sbjct: 792 KFSRW*TRAPFGALQQNQPFQ*VLWARNRPFSVSHWNKRARLSHLLSAHKIQLP 631
Score = 34.5 bits (69), Expect(2) = 3e-079
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3 / -1
Query: 771 QAKTRGTPSLGPSTPGMKSILGP 839
Q K GTP +GP +PG KS LGP
Sbjct: 873 QPKPGGTPWMGPISPGNKSHLGP 805
Score = 33.1 bits (66), Expect(3) = e-106
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3 / +2
Query: 841 IGPRMDFIPGVDGPSEGVP 785
+GPR D PG+ GP +GVP
Sbjct: 803 LGPRWDLFPGLMGPIQGVP 859
Score = 29.9 bits (59), Expect(4) = 3e-035
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -1
Query: 1417 QSCRW*GARRSCRPDP 1464
+SCRW* A R RPDP
Sbjct: 225 RSCRW*AAPRRRRPDP 178
Score = 22.6 bits (43), Expect(3) = e-106
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3 / +1
Query: 1585 PRRTPCRGASRAHSPSRATXTR 1520
P P R AHSPSR R
Sbjct: 49 PSPNPTRPDPHAHSPSRRGSDR 114
Score = 22.1 bits (42), Expect(2) = 4e-023
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3 / +3
Query: 805 GPSEGVPRVL 776
GPS G PRVL
Sbjct: 840 GPSRGFPRVL 869
Score = 21.7 bits (41), Expect(4) = 3e-035
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1 / -3
Query: 1537 GTGNARGSLPGTGFSW 1584
GTGNARG W
Sbjct: 97 GTGNARGDRVWLDLGW 50
>gb|CA019987.1|CA019987 HV14A03r HV Hordeum vulgare subsp. vulgare cDNA clone HV14A03
5-PRIME, mRNA sequence
Length = 655
Score = 384 bits (832), Expect(2) = e-106
Identities = 156/166 (93%), Positives = 159/166 (95%)
Frame = -3 / +3
Query: 1459 LDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLAVDVYCDKIRHLVDPAPPHLAGR 1280
LDG +VAPLTICMIGAGGFIGSHLCEKLMAET+HVVLAVDVY DKIRHLVDP PPHLAGR
Sbjct: 156 LDGGAVAPLTICMIGAGGFIGSHLCEKLMAETQHVVLAVDVYSDKIRHLVDPPPPHLAGR 335
Query: 1279 ISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE 1100
ISFHRLNIKND RLEGL+KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE
Sbjct: 336 ISFHRLNIKNDPRLEGLVKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE 515
Query: 1099 NSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEPEFYVLKEDESPCIF 962
N KRLIHFSTCEVYGKTIGSFLPKDHPLRKE EFYVL EDESPCIF
Sbjct: 516 NGKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLTEDESPCIF 653
Score = 285 bits (617), Expect = 4e-076
Identities = 131/165 (79%), Positives = 136/165 (82%)
Frame = +3 / -1
Query: 960 PKIQGDSSSLRT*NXXXXXXXXXXXXKLPMVLP*TSHVEKWMRRLLFSEQYLTTGSASMK 1139
PK+QGDSSS+ T*N KLPMVLP*TSHVEKW+RRL FSEQYLTTGSASMK
Sbjct: 655 PKMQGDSSSVST*NSASLRRG*SLGRKLPMVLP*TSHVEKWIRRLPFSEQYLTTGSASMK 476
Query: 1140 LL*MVSRGRVL*SAGVQIAARLMVRSAILMSPSSLESFLMLRRWKEMRPARCGGAGSTRW 1319
LL*MVS GRVL*SAGVQIAAR +VRSAIL PS SFLMLRRWKEMRPAR GG GSTRW
Sbjct: 475 LL*MVSSGRVL*SAGVQIAARFIVRSAILTRPSRRGSFLMLRRWKEMRPARWGGGGSTRW 296
Query: 1320 RILSQYTSTARTTWRVSAMSFSQRWEPMKPPAPIMQMVRGATELP 1454
RILS+ TSTARTT VSAMSFSQRWEPMKPPAPIMQMV GAT P
Sbjct: 295 RILSE*TSTARTTCWVSAMSFSQRWEPMKPPAPIMQMVSGATAPP 161
Score = 184 bits (396), Expect(3) = 7e-048
Identities = 73/101 (72%), Positives = 76/101 (75%)
Frame = +1 / -2
Query: 961 QKYRATHLL*EHKIQVPCGAGGLWGGSCRWSCHRPRTWRSG*DACCSRSST*PLGVHR*S 1140
Q+ R THLL HKIQ+PCG G WGGSCRWSCHRPRTWRSG DAC S SST*P G R*S
Sbjct: 654 QRCRVTHLLSAHKIQLPCGGGDPWGGSCRWSCHRPRTWRSGSDACRSPSST*PPGARR*S 475
Query: 1141 CCRWCQGGECCSPPACR*PPG*WSDRPS**APRAWSHS*C* 1263
CCRWC+ CCSPPACR PPG SDRPS* PR S*C*
Sbjct: 474 CCRWCRAAACCSPPACRSPPGLSSDRPS*RGPRGGGRS*C* 352
Score = 151 bits (324), Expect(2) = 5e-063
Identities = 66/83 (79%), Positives = 71/83 (85%)
Frame = +2 / -3
Query: 1211 QIGHLDEPLEPGVILDVKAVEGDAPREVRRRGVDEVADLIAVYVDGEDDMARLGHELLAE 1390
QIGHLDE LE GV+LDV+AVEGDAP EV RR VDEVADL+ V VDGEDD+ LGHELLAE
Sbjct: 404 QIGHLDEALEAGVVLDVEAVEGDAPGEVGRRRVDEVADLVGVDVDGEDDVLGLGHELLAE 225
Query: 1391 VGADEAAGANHADGEGRDGVAVQ 1459
VGADEAAGA+HADGE R G AVQ
Sbjct: 224 VGADEAAGADHADGERRHGAAVQ 156
Score = 111 bits (237), Expect(2) = 5e-063
Identities = 50/66 (75%), Positives = 57/66 (86%)
Frame = +2 / -3
Query: 962 KNTGRLIFFKNIKFRFLAERVVFGEEAADGLAIDLARGEVDETLAVLGAVLDHWECIDEV 1141
K+ G LIF ++IKF FLAE V+ GEEAADGLAIDLARGEVD+TLAVL AVLDH E +DEV
Sbjct: 653 KDAG*LIFCQHIKFSFLAEGVILGEEAADGLAIDLARGEVDQTLAVLRAVLDHRERVDEV 474
Query: 1142 AVDGVK 1159
AVDGV+
Sbjct: 473 AVDGVE 456
Score = 92.7 bits (196), Expect(3) = 2e-021
Identities = 42/70 (60%), Positives = 44/70 (62%)
Frame = -2 / +2
Query: 1256 QE*LQARGAHQDGRSDHQPGGYLHAGGXXXXXXXXXXXXXHRCTPSGQVLLREQQASHPL 1077
QE RG QDGRSD +PGG LHAGG HR P GQVLL E+QAS PL
Sbjct: 359 QERPPPRGPRQDGRSDDKPGGDLHAGGLQHAAARHHLQQLHRRAPGGQVLLGERQASDPL 538
Query: 1076 LHVRGLWQDH 1047
LHVRGLWQDH
Sbjct: 539 LHVRGLWQDH 568
Score = 29.9 bits (59), Expect(3) = 7e-048
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -2
Query: 1417 QSCRW*GARRSCRPDP 1464
+SCRW* A R RPDP
Sbjct: 198 RSCRW*AAPRRRRPDP 151
Score = 27.6 bits (54), Expect(3) = 2e-021
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2 / +2
Query: 1010 GT*ILCS*RR*VALYFW 960
G+*ILC+ RR*V L+ W
Sbjct: 605 GS*ILCADRR*VTLHLW 655
Score = 25.8 bits (50), Expect(3) = 2e-021
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3 / +2
Query: 1618 RHRLLTRQAPLPRRTPCRGASRAH 1547
R R L RQ P PRR RAH
Sbjct: 266 RRRRLLRQDPPPRRPAAAPPRRAH 337
Score = 22.6 bits (43), Expect(2) = e-106
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3 / +1
Query: 1585 PRRTPCRGASRAHSPSRATXTR 1520
P P R AHSPSR R
Sbjct: 22 PSPNPTRPDPHAHSPSRRGSDR 87
Score = 21.7 bits (41), Expect(3) = 7e-048
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1 / -1
Query: 1537 GTGNARGSLPGTGFSW 1584
GTGNARG W
Sbjct: 70 GTGNARGDRVWLDLGW 23
>gb|BI957842.1|BI957842 HVSMEn0011K03f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0011K03f,
mRNA sequence
Length = 1321
Score = 384 bits (833), Expect = e-106
Identities = 156/176 (88%), Positives = 161/176 (91%)
Frame = -3 / +2
Query: 1363 RHVVLAVDVYCDKIRHLVDPAPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICT 1184
+HVVLAVDVY DKIRHLVDP+PPH AGRISFHRLNIKND RLEGL+KMADLTINLAAICT
Sbjct: 2 QHVVLAVDVYSDKIRHLVDPSPPHRAGRISFHRLNIKNDPRLEGLVKMADLTINLAAICT 181
Query: 1183 PADYNTRPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEP 1004
PADYNTRPLDTIYSNFIDALPVVKYCSEN KRLIHFSTCEVYGKTIGSFLPKDHPLRKE
Sbjct: 182 PADYNTRPLDTIYSNFIDALPVVKYCSENGKRLIHFSTCEVYGKTIGSFLPKDHPLRKEA 361
Query: 1003 EFYVLKEDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIG 836
EFYVL EDESPCIFGPIVKQRW+YACAKQLIERL FAE NGL+F I RP W G
Sbjct: 362 EFYVLTEDESPCIFGPIVKQRWAYACAKQLIERLAFAECTXNGLDFAIRRPLAWDG 529
Score = 281 bits (609), Expect = 5e-075
Identities = 130/176 (73%), Positives = 137/176 (77%)
Frame = +3 / -2
Query: 831 LGPIQLKGLTIVNSRPFSAPSANTSLSISCFAQA*DHLCFTIGPKIQGDSSSLRT*NXXX 1010
L P +GL + SRPF SA SLSISCFA A* HLCFTIGPK+QGDSSS+ T*N
Sbjct: 534 LAPSHARGLRMAKSRPFXVHSAKASLSISCFAHA*AHLCFTIGPKMQGDSSSVST*NSAS 355
Query: 1011 XXXXXXXXXKLPMVLP*TSHVEKWMRRLLFSEQYLTTGSASMKLL*MVSRGRVL*SAGVQ 1190
KLPMVLP*TSHVEKW+RR FSEQYLTTGSASMKLL*MVS GRVL*SAGVQ
Sbjct: 354 LRRG*SLGRKLPMVLP*TSHVEKWIRRFPFSEQYLTTGSASMKLL*MVSSGRVL*SAGVQ 175
Query: 1191 IAARLMVRSAILMSPSSLESFLMLRRWKEMRPARCGGAGSTRWRILSQYTSTARTT 1358
IAAR +VRSAIL PS SFLMLRRWKEMRPAR GG GSTRWRILS+ TSTARTT
Sbjct: 174 IAARFIVRSAILTRPSRRGSFLMLRRWKEMRPARWGGDGSTRWRILSE*TSTARTT 7
Score = 212 bits (458), Expect = 4e-054
Identities = 89/129 (68%), Positives = 94/129 (72%)
Frame = +1 / -3
Query: 877 HFLHLQQIQASQ*VASRKHRTIFVSRLDQKYRATHLL*EHKIQVPCGAGGLWGGSCRWSC 1056
H +QQ ASQ* A R HR IFVS+LDQ+ R THLL HKIQ+PCG G WGGSCRWSC
Sbjct: 488 HLXCIQQKLASQ*AALRTHRPIFVSQLDQRCRVTHLLSAHKIQLPCGGGDPWGGSCRWSC 309
Query: 1057 HRPRTWRSG*DACCSRSST*PLGVHR*SCCRWCQGGECCSPPACR*PPG*WSDRPS**AP 1236
HRPRTWRSG DA S SST*P G R*SCCRWC+ CCSPPACR PPG SDRPS* P
Sbjct: 308 HRPRTWRSGSDASRSPSST*PPGARR*SCCRWCRAAACCSPPACRSPPGLSSDRPS*RGP 129
Query: 1237 RAWSHS*C* 1263
R S*C*
Sbjct: 128 RGGGRS*C* 102
Score = 168 bits (361), Expect(2) = 3e-061
Identities = 76/108 (70%), Positives = 85/108 (78%)
Frame = +2 / -1
Query: 836 PNPIKRSHDCEFKAIFCTFSKYKPLNKLLRASIGPSLFHDWTKNTGRLIFFKNIKFRFLA 1015
P P +RS D E I C FSK PLNKLL A IGPSLFH+WTK+ G LIF ++IKF FLA
Sbjct: 529 PIPCERSTDGEI*TIXCAFSKS*PLNKLLCARIGPSLFHNWTKDAG*LIFCQHIKFSFLA 350
Query: 1016 ERVVFGEEAADGLAIDLARGEVDETLAVLGAVLDHWECIDEVAVDGVK 1159
E V+ GEEAADGLAIDLARGEVD+TL VL AVLDH E +DEVAVDGV+
Sbjct: 349 EGVILGEEAADGLAIDLARGEVDQTLPVLRAVLDHRERVDEVAVDGVE 206
Score = 118 bits (253), Expect(2) = 3e-026
Identities = 65/142 (45%), Positives = 72/142 (50%)
Frame = -1 / +3
Query: 1260 TSRMTPGSRGSSRWPI*PSTWXXXXXXXXXXXXXXXXXXXXXSMHSQWSSTAPRTASVXX 1081
TSR TP SR SSRWPI* TW S S+WSSTA RT SV
Sbjct: 105 TSRTTPASRASSRWPI*R*TWRRSARRRTTTRGRSTPSTATSSTRSRWSSTARRTGSV*S 284
Query: 1080 XXXXXXXXXXXXXXXXPKTTRSARNLNFMFLKKMSRPVFLVQS*NKDGPMLARSNLLRGL 901
P+ T SAR LNFM +KMS P LVQ *NKDGPM A+S+LLRG
Sbjct: 285 TSPRARSMARPSAASSPRITPSARKLNFMC*QKMSHPASLVQL*NKDGPMRAQSSLLRG* 464
Query: 900 YLLKVQKMALNSQS*DLLIGLG 835
LL +M S S DL G+G
Sbjct: 465 LLLNAXQMV*ISPSVDLSHGMG 530
Score = 91.3 bits (193), Expect(2) = 6e-032
Identities = 41/70 (58%), Positives = 44/70 (62%)
Frame = -2 / +1
Query: 1256 QE*LQARGAHQDGRSDHQPGGYLHAGGXXXXXXXXXXXXXHRCTPSGQVLLREQQASHPL 1077
QE RG QDGRSD +PGG LHAGG HR P GQVLL E++AS PL
Sbjct: 109 QERPPPRGPRQDGRSDDKPGGDLHAGGLQHAAARHHLQQLHRRAPGGQVLLGEREASDPL 288
Query: 1076 LHVRGLWQDH 1047
LHVRGLWQDH
Sbjct: 289 LHVRGLWQDH 318
Score = 88.6 bits (187), Expect(2) = 3e-061
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = +2 / -1
Query: 1211 QIGHLDEPLEPGVILDVKAVEGDAPREVRRRGVDEVADLIAVYVDGEDDM 1360
QIGHLDE LE GV+LDV+AVEGDAP V RR VDEVADL+ V VDGEDD+
Sbjct: 154 QIGHLDEALEAGVVLDVEAVEGDAPGAVGRRRVDEVADLVGVDVDGEDDV 5
Score = 67.5 bits (141), Expect(2) = 6e-032
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = -2 / +1
Query: 1010 GT*ILCS*RR*VALYFWSNRETKMVLCLREATY*EACIC*RCRKWP*IHNRETF*LDWAK 831
G+*ILC+ RR*V L+ WSN ETKM LC+R+A Y*EA C* KW + T + W +
Sbjct: 355 GS*ILCADRR*VTLHLWSNCETKMGLCVRKAAY*EASFC*MHXKWSRFRHP*TSRMGWGQ 534
Score = 25.4 bits (49), Expect(2) = 3e-026
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3 / +1
Query: 1618 RHRLLTRQAPLPRRTPCRGASRAH 1547
R R L RQ P PRR RAH
Sbjct: 16 RRRRLLRQDPPPRRPVAAPPRRAH 87
>gb|AL507105.1|AL507105 AL507105 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05I02T 5',
mRNA sequence
Length = 699
Score = 370 bits (803), Expect(2) = e-104
Identities = 151/161 (93%), Positives = 154/161 (95%)
Frame = -3 / +3
Query: 1462 DLDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLAVDVYCDKIRHLVDPAPPHLAG 1283
DLDG +VAPLTICMIGAGGFIGSHLCEKLMAET+HVVLAVDVY DKIRHLVDP PPHLAG
Sbjct: 126 DLDGGAVAPLTICMIGAGGFIGSHLCEKLMAETQHVVLAVDVYSDKIRHLVDPPPPHLAG 305
Query: 1282 RISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 1103
RISFHRLNIKND RLEGL+KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS
Sbjct: 306 RISFHRLNIKNDPRLEGLVKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 485
Query: 1102 ENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEPEFYVLKED 980
EN KRLIHFSTCEVYGKTIGSFLPKDHPLRKE EFYVL ED
Sbjct: 486 ENGKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLTED 608
Score = 271 bits (587), Expect(2) = 3e-074
Identities = 126/159 (79%), Positives = 130/159 (81%)
Frame = +3 / -3
Query: 978 SSSLRT*NXXXXXXXXXXXXKLPMVLP*TSHVEKWMRRLLFSEQYLTTGSASMKLL*MVS 1157
SSS+ T*N KLPMVLP*TSHVEKW+RRL FSEQYLTTGSASMKLL*MVS
Sbjct: 610 SSSVST*NSASLRRG*SLGRKLPMVLP*TSHVEKWIRRLPFSEQYLTTGSASMKLL*MVS 431
Query: 1158 RGRVL*SAGVQIAARLMVRSAILMSPSSLESFLMLRRWKEMRPARCGGAGSTRWRILSQY 1337
GRVL*SAGVQIAAR +VRSAIL PS SFLMLRRWKEMRPAR GG GSTRWRILS+
Sbjct: 430 SGRVL*SAGVQIAARFIVRSAILTRPSRRGSFLMLRRWKEMRPARWGGGGSTRWRILSE* 251
Query: 1338 TSTARTTWRVSAMSFSQRWEPMKPPAPIMQMVRGATELP 1454
TSTARTT VSAMSFSQRWEPMKPPAPIMQMV GAT P
Sbjct: 250 TSTARTTCWVSAMSFSQRWEPMKPPAPIMQMVSGATAPP 134
Score = 177 bits (381), Expect(2) = 2e-045
Identities = 70/95 (73%), Positives = 72/95 (75%)
Frame = +1 / -1
Query: 979 HLL*EHKIQVPCGAGGLWGGSCRWSCHRPRTWRSG*DACCSRSST*PLGVHR*SCCRWCQ 1158
HLL HKIQ+PCG G WGGSCRWSCHRPRTWRSG DAC S SST*P G R*SCCRWC+
Sbjct: 609 HLLSAHKIQLPCGGGDPWGGSCRWSCHRPRTWRSGSDACRSPSST*PPGARR*SCCRWCR 430
Query: 1159 GGECCSPPACR*PPG*WSDRPS**APRAWSHS*C* 1263
CCSPPACR PPG SDRPS* PR S*C*
Sbjct: 429 AAACCSPPACRSPPGLSSDRPS*RGPRGGGRS*C* 325
Score = 153 bits (328), Expect(3) = 7e-065
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = +2 / -2
Query: 1211 QIGHLDEPLEPGVILDVKAVEGDAPREVRRRGVDEVADLIAVYVDGEDDMARLGHELLAE 1390
QIGHLDE LE GV+LDV+AVEGDAP EV RR VDEVADL+ V VDGEDD+ LGHELLAE
Sbjct: 377 QIGHLDEALEAGVVLDVEAVEGDAPGEVGRRRVDEVADLVGVDVDGEDDVLGLGHELLAE 198
Query: 1391 VGADEAAGANHADGEGRDGVAVQI 1462
VGADEAAGA+HADGE R G AVQI
Sbjct: 197 VGADEAAGADHADGERRHGAAVQI 126
Score = 108 bits (230), Expect(3) = 7e-065
Identities = 49/66 (74%), Positives = 55/66 (83%)
Frame = +2 / -2
Query: 962 KNTGRLIFFKNIKFRFLAERVVFGEEAADGLAIDLARGEVDETLAVLGAVLDHWECIDEV 1141
K G IF ++IKF FLAE V+ GEEAADGLAIDLARGEVD+TLAVL AVLDH E +DEV
Sbjct: 626 KMQGDXIFCQHIKFSFLAEGVILGEEAADGLAIDLARGEVDQTLAVLRAVLDHRERVDEV 447
Query: 1142 AVDGVK 1159
AVDGV+
Sbjct: 446 AVDGVE 429
Score = 29.9 bits (59), Expect(2) = 2e-045
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -1
Query: 1417 QSCRW*GARRSCRPDP 1464
+SCRW* A R RPDP
Sbjct: 171 RSCRW*AAPRRRRPDP 124
Score = 29.5 bits (58), Expect(2) = e-104
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +2
Query: 973 PCIFGPIVKQRW 938
P FGPIVKQRW
Sbjct: 617 PASFGPIVKQRW 652
Score = 28.6 bits (56), Expect(2) = 3e-074
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / -1
Query: 939 HLCFTIGPKIQG 974
HLCFTIGPK G
Sbjct: 651 HLCFTIGPKDAG 616
Score = 26.3 bits (51), Expect(3) = 7e-065
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / -3
Query: 938 PSLFHDWTK 964
PSLFH+WTK
Sbjct: 652 PSLFHNWTK 626
>gb|AL506128.1|AL506128 AL506128 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02C03T 5',
mRNA sequence
Length = 670
Score = 347 bits (753), Expect(3) = e-101
Identities = 141/149 (94%), Positives = 144/149 (96%)
Frame = -3 / +1
Query: 1462 DLDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLAVDVYCDKIRHLVDPAPPHLAG 1283
DLDG +VAPLTICMIGAGGFIGSHLCEKLMAET+HVVLAVDVY DKIRHLVDP PPHLAG
Sbjct: 151 DLDGGAVAPLTICMIGAGGFIGSHLCEKLMAETQHVVLAVDVYSDKIRHLVDPPPPHLAG 330
Query: 1282 RISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 1103
RISFHRLNIKND RLEGL+KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS
Sbjct: 331 RISFHRLNIKNDPRLEGLVKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 510
Query: 1102 ENSKRLIHFSTCEVYGKTIGSFLPKDHPL 1016
EN KRLIHFSTCEVYGKTIGSFLPKDHPL
Sbjct: 511 ENGKRLIHFSTCEVYGKTIGSFLPKDHPL 597
Score = 265 bits (574), Expect(3) = 6e-076
Identities = 120/139 (86%), Positives = 123/139 (88%)
Frame = +3 / -3
Query: 1038 KLPMVLP*TSHVEKWMRRLLFSEQYLTTGSASMKLL*MVSRGRVL*SAGVQIAARLMVRS 1217
KLPMVLP*TSHVEKW+RRL FSEQYLTTGSASMKLL*MVS GRVL*SAGVQIAAR +VRS
Sbjct: 575 KLPMVLP*TSHVEKWIRRLPFSEQYLTTGSASMKLL*MVSSGRVL*SAGVQIAARFIVRS 396
Query: 1218 AILMSPSSLESFLMLRRWKEMRPARCGGAGSTRWRILSQYTSTARTTWRVSAMSFSQRWE 1397
AIL PS SFLMLRRWKEMRPAR GG GSTRWRILS+ TSTARTT VSAMSFSQRWE
Sbjct: 395 AILTRPSRRGSFLMLRRWKEMRPARWGGGGSTRWRILSE*TSTARTTCWVSAMSFSQRWE 216
Query: 1398 PMKPPAPIMQMVRGATELP 1454
PMKPPAPIMQMV GAT P
Sbjct: 215 PMKPPAPIMQMVSGATAPP 159
Score = 153 bits (328), Expect(3) = 7e-059
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = +2 / -2
Query: 1211 QIGHLDEPLEPGVILDVKAVEGDAPREVRRRGVDEVADLIAVYVDGEDDMARLGHELLAE 1390
QIGHLDE LE GV+LDV+AVEGDAP EV RR VDEVADL+ V VDGEDD+ LGHELLAE
Sbjct: 402 QIGHLDEALEAGVVLDVEAVEGDAPGEVGRRRVDEVADLVGVDVDGEDDVLGLGHELLAE 223
Query: 1391 VGADEAAGANHADGEGRDGVAVQI 1462
VGADEAAGA+HADGE R G AVQI
Sbjct: 222 VGADEAAGADHADGERRHGAAVQI 151
Score = 151 bits (325), Expect(3) = 3e-038
Identities = 60/81 (74%), Positives = 61/81 (75%)
Frame = +1 / -1
Query: 1021 GGLWGGSCRWSCHRPRTWRSG*DACCSRSST*PLGVHR*SCCRWCQGGECCSPPACR*PP 1200
G WGGSCRWSCHRPRTWRSG DAC S SST*P G R*SCCRWC+ CCSPPACR PP
Sbjct: 592 GDPWGGSCRWSCHRPRTWRSGSDACRSPSST*PPGARR*SCCRWCRAAACCSPPACRSPP 413
Query: 1201 G*WSDRPS**APRAWSHS*C* 1263
G SDRPS* PR S*C*
Sbjct: 412 GLSSDRPS*RGPRGGGRS*C* 350
Score = 92.7 bits (196), Expect(3) = 2e-021
Identities = 42/70 (60%), Positives = 44/70 (62%)
Frame = -2 / +3
Query: 1256 QE*LQARGAHQDGRSDHQPGGYLHAGGXXXXXXXXXXXXXHRCTPSGQVLLREQQASHPL 1077
QE RG QDGRSD +PGG LHAGG HR P GQVLL E+QAS PL
Sbjct: 357 QERPPPRGPRQDGRSDDKPGGDLHAGGLQHAAARHHLQQLHRRAPGGQVLLGERQASDPL 536
Query: 1076 LHVRGLWQDH 1047
LHVRGLWQDH
Sbjct: 537 LHVRGLWQDH 566
Score = 88.1 bits (186), Expect(3) = 7e-059
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +2 / -2
Query: 1010 LAERVVFGEEAADGLAIDLARGEVDETLAVLGAVLDHWECIDEVAVDGVK 1159
L + V+ GEEAADGLAIDLARGEVD+TLAVL AVLDH E +DEVAVDGV+
Sbjct: 603 LRKGVILGEEAADGLAIDLARGEVDQTLAVLRAVLDHRERVDEVAVDGVE 454
Score = 38.2 bits (77), Expect(3) = e-101
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / +2
Query: 1033 PKDHPLRKEPEFYVLKEDESP 971
P+ P RKE EFYVL EDESP
Sbjct: 581 PRITPFRKEAEFYVLTEDESP 643
Score = 35.4 bits (71), Expect(3) = 6e-076
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1 / -3
Query: 970 RATHLL*EHKIQVPCGAG 1023
R THLL HKIQ+PCG G
Sbjct: 644 RVTHLLSAHKIQLPCGRG 591
Score = 29.9 bits (59), Expect(3) = 3e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -1
Query: 1417 QSCRW*GARRSCRPDP 1464
+SCRW* A R RPDP
Sbjct: 196 RSCRW*AAPRRRRPDP 149
Score = 27.6 bits (54), Expect(3) = 2e-021
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3 / +3
Query: 1021 PLRKEPEFYVLKEDESPCIFGPIVK 947
P ++ F ++ PCIFGPIVK
Sbjct: 594 PSARKLNFMC*QKMSHPCIFGPIVK 668
Score = 26.3 bits (51), Expect(3) = 7e-059
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / -1
Query: 962 KNTGRLIFFKNIKFRFLAE 1018
K G LIF ++IKF FLAE
Sbjct: 652 KMQG*LIFCQHIKFSFLAE 596
Score = 25.8 bits (50), Expect(3) = 2e-021
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3 / +3
Query: 1618 RHRLLTRQAPLPRRTPCRGASRAH 1547
R R L RQ P PRR RAH
Sbjct: 264 RRRRLLRQDPPPRRPAAAPPRRAH 335
Score = 23.5 bits (45), Expect(3) = 6e-076
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3 / -1
Query: 948 FTIGPKIQG 974
FTIGPK+QG
Sbjct: 667 FTIGPKMQG 641
Score = 22.6 bits (43), Expect(3) = e-101
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3 / +2
Query: 1585 PRRTPCRGASRAHSPSRATXTR 1520
P P R AHSPSR R
Sbjct: 20 PSPNPTRPDPHAHSPSRRGSDR 85
Score = 21.7 bits (41), Expect(3) = 3e-038
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1 / -3
Query: 1537 GTGNARGSLPGTGFSW 1584
GTGNARG W
Sbjct: 68 GTGNARGDRVWLDLDW 21
>gb|BQ765070.1|BQ765070 EBca01_SQ005_P13_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_P13 5', mRNA sequence
Length = 458
Score = 354 bits (767), Expect = 9e-097
Identities = 143/149 (95%), Positives = 147/149 (98%)
Frame = -3 / +3
Query: 1057 GKTIGSFLPKDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAEN 878
GKTIGSFLPKDHPLRKE EFYVL EDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAEN
Sbjct: 12 GKTIGSFLPKDHPLRKEAEFYVLTEDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAEN 191
Query: 877 GLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFV 698
GL+FTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTFV
Sbjct: 192 GLDFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRRKPLKLVDGGESQRTFV 371
Query: 697 YIKDAIEAVVLMIENPARANGHIFNVGNP 611
YIKDAIEAV+LMIENPARANGHIFNVGNP
Sbjct: 372 YIKDAIEAVLLMIENPARANGHIFNVGNP 458
Score = 256 bits (554), Expect = 2e-067
Identities = 106/149 (71%), Positives = 124/149 (83%)
Frame = +2 / -1
Query: 611 RIPNIEDVAIGSSRIFNHQHYSFDSILDVDKGSLRLTPINKLQGLSPEQIVTEASQNPRH 790
R+PN+ED+ IGSSR+FNHQ SF+ ILDV+K SL L IN+LQGLS +IV EASQNPR+
Sbjct: 458 RVPNVEDMTIGSSRVFNHQKNSFNGILDVNKSSLGLAAINELQGLSA*EIVAEASQNPRN 279
Query: 791 TLARTIDTRNEIHPWPNPIKRSHDCEFKAIFCTFSKYKPLNKLLRASIGPSLFHDWTKNT 970
TLARTI+ RNE+HPWPNPI+RSH+ E KAIFC FSK KP NKLL A IGPSLFH+WTK+
Sbjct: 278 TLARTINARNEVHPWPNPIERSHNREIKAIFCAFSKNKPFNKLLCARIGPSLFHNWTKDA 99
Query: 971 GRLIFFKNIKFRFLAERVVFGEEAADGLA 1057
G LIF ++IKF FLAE V+ GEEAADGLA
Sbjct: 98 G*LIFCQHIKFSFLAEGVILGEEAADGLA 12
Score = 249 bits (539), Expect = 2e-065
Identities = 113/149 (75%), Positives = 117/149 (78%)
Frame = +3 / -2
Query: 612 GFPTLKMWPLARAGFXXXXXXXXXXXLM*TKVL*D*PPSTSFKGSLRSRLLLKQAKTRGT 791
GFPTLK+ PLARAGF LM*TKVL D PPSTSF+G LR RLLLKQAKTRGT
Sbjct: 457 GFPTLKI*PLARAGFSIIKRTASMASLM*TKVLWDSPPSTSFRGFLRKRLLLKQAKTRGT 278
Query: 792 PSLGPSTPGMKSILGPIQLKGLTIVNSRPFSAPSANTSLSISCFAQA*DHLCFTIGPKIQ 971
PSLGPSTPGMKSILGPIQLKGLTIV SRPFSAPSA TSLSISCFA A*DHLCFTIGPK+Q
Sbjct: 277 PSLGPSTPGMKSILGPIQLKGLTIVKSRPFSAPSAKTSLSISCFAHA*DHLCFTIGPKMQ 98
Query: 972 GDSSSLRT*NXXXXXXXXXXXXKLPMVLP 1058
GDSSS+ T*N KLPMVLP
Sbjct: 97 GDSSSVST*NSASLRRG*SLGRKLPMVLP 11
Score = 232 bits (502), Expect = 3e-060
Identities = 103/147 (70%), Positives = 113/147 (76%)
Frame = +1 / -3
Query: 616 SQH*RCGHWLEQDFQSSALQLR*HP*CRQRFSETDPHQQASRALSGADCY*SKPKPEAHP 795
SQ *R HWLEQ FQSS QL+ HP*C+Q+FS T HQ+AS A DC *SKPKPE HP
Sbjct: 453 SQR*RYDHWLEQGFQSSKEQLQWHP*CKQKFSGTRRHQRASGAFCVRDCC*SKPKPEEHP 274
Query: 796 R*DHRHQE*NPSLAQSN*KVSRL*IQGHFLHLQQIQASQ*VASRKHRTIFVSRLDQKYRA 975
R*DH+ QE*+PSLAQSN*KVS+ * QGHFL LQQ QA Q* A R HRTI VS+LDQ+ R
Sbjct: 273 R*DHQRQE*SPSLAQSN*KVSQS*NQGHFLRLQQKQAFQ*AALRTHRTISVSQLDQRCRV 94
Query: 976 THLL*EHKIQVPCGAGGLWGGSCRWSC 1056
THLL HKIQ+PCG G WGGSCRWSC
Sbjct: 93 THLLSAHKIQLPCGGGDPWGGSCRWSC 13
Score = 186 bits (400), Expect = 4e-046
Identities = 94/138 (68%), Positives = 102/138 (73%)
Frame = -1 / +1
Query: 1029 KTTRSARNLNFMFLKKMSRPVFLVQS*NKDGPMLARSNLLRGLYLLKVQKMALNSQS*DL 850
+ T SAR LNFM +KMS P LVQ *N+DGPM A+S+LL+GL+LLK QKMAL S+ *DL
Sbjct: 40 RITPSARKLNFMC*QKMSHPASLVQL*NRDGPMRAQSSLLKGLFLLKAQKMALISRL*DL 219
Query: 849 LIGLGQGWISFLVSMVLARVCLGFWLASVTICSGESP*SLLMGVSLREPLSTSRMLSKL* 670
IGLGQGW SFL MVLARV LGFWLAS TI ESP*S LM S RE L TSRM KL
Sbjct: 220 SIGLGQGWTSFLALMVLARVFLGFWLASATISYAESP*SSLMAASPRELLFTSRMPLKLF 399
Query: 669 C**LKILLEPMATSSMLG 616
**LK LLEPM SS LG
Sbjct: 400 F**LKTLLEPMVISSTLG 453
Score = 184 bits (396), Expect = 1e-045
Identities = 76/110 (69%), Positives = 88/110 (80%)
Frame = -2 / +2
Query: 1010 GT*ILCS*RR*VALYFWSNRETKMVLCLREATY*EACIC*RCRKWP*IHNRETF*LDWAK 831
G+*ILC+ RR*V L+ WSN ET+MVLC+R+A Y*+AC C*R RKWP* H+ ETF LDWAK
Sbjct: 59 GS*ILCADRR*VTLHLWSNCETEMVLCVRKAAY*KACFC*RRRKWP*FHDCETFQLDWAK 238
Query: 830 DGFHSWCRWS*RGCASGFGLLQ*QSAPERALEAC*WGSVSENLCLHQGCY 681
DG HSW WS*RGC+SGFGLLQ QS ++A EA *W V EN CLHQGC+
Sbjct: 239 DGLHSWR*WS*RGCSSGFGLLQQQSLTQKAPEAR*WRRVPENFCLHQGCH 388
>gb|BM444118.1|BM444118 EBem09_SQ004_D11_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ004_D11 5', mRNA sequence
Length = 449
Score = 342 bits (741), Expect = 3e-093
Identities = 140/149 (93%), Positives = 146/149 (97%)
Frame = -3 / +2
Query: 964 FGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVP 785
FGPIVKQRWSYACAKQLIERLVFAEGAENGL+FTIVRPFNWIGPRMDFIPGVDGPSEGVP
Sbjct: 2 FGPIVKQRWSYACAKQLIERLVFAEGAENGLDFTIVRPFNWIGPRMDFIPGVDGPSEGVP 181
Query: 784 RVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVVLMIENPARANGHIFNVGNPNN 605
RVLACFSNNLLRREPLKLVDGG+SQRTFVYIKDAIEAV+LMIENPARANGHIFNVGNP+N
Sbjct: 182 RVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPDN 361
Query: 604 EVTVRELAQMMTEVYANVSGEAPLDEPMI 518
EVTVRELA MMTEVYA VSGE PL+EP+I
Sbjct: 362 EVTVRELADMMTEVYAKVSGEPPLEEPVI 448
Score = 271 bits (587), Expect = 6e-072
Identities = 124/149 (83%), Positives = 126/149 (84%)
Frame = +3 / -3
Query: 519 IMGSSSGASPETFA*TSVIIWANSLTVTSLFGFPTLKMWPLARAGFXXXXXXXXXXXLM* 698
I GSSSG SPET A*TSVII ANSLTVTSL GFPTLK+ PLARAGF LM*
Sbjct: 447 ITGSSSGGSPETLA*TSVIISANSLTVTSLSGFPTLKI*PLARAGFSIIKRTASMASLM* 268
Query: 699 TKVL*D*PPSTSFKGSLRSRLLLKQAKTRGTPSLGPSTPGMKSILGPIQLKGLTIVNSRP 878
TKVL D PPSTSF+GSLR RLLLKQAKTRGTPSLGPSTPGMKSILGPIQLKGLTIV SRP
Sbjct: 267 TKVLWDSPPSTSFRGSLRKRLLLKQAKTRGTPSLGPSTPGMKSILGPIQLKGLTIVKSRP 88
Query: 879 FSAPSANTSLSISCFAQA*DHLCFTIGPK 965
FSAPSA TSLSISCFA A*DHLCFTIGPK
Sbjct: 87 FSAPSAKTSLSISCFAHA*DHLCFTIGPK 1
Score = 263 bits (568), Expect = 2e-069
Identities = 105/149 (70%), Positives = 125/149 (83%)
Frame = +2 / -2
Query: 518 NHGLIQRCLS*DICVDLCHHLGQLPNGNFIVRIPNIEDVAIGSSRIFNHQHYSFDSILDV 697
+H L+QR LS*D+ +DLCHH+ QLPN +FIVR+PN+ED+ IGSSR+FNHQ SF+ ILDV
Sbjct: 448 DHRLLQRGLS*DLSIDLCHHISQLPNSDFIVRVPNVEDMTIGSSRVFNHQKNSFNGILDV 269
Query: 698 DKGSLRLTPINKLQGLSPEQIVTEASQNPRHTLARTIDTRNEIHPWPNPIKRSHDCEFKA 877
+K SL L IN+LQGLS +IV EASQNPR+TLARTI+ RNE+HPWPNPI+RSH+ E KA
Sbjct: 268 NKSSLGLAAINELQGLSA*EIVAEASQNPRNTLARTINARNEVHPWPNPIERSHNREIKA 89
Query: 878 IFCTFSKYKPLNKLLRASIGPSLFHDWTK 964
IFC FSK KP NKLL A IGPSLFH+WTK
Sbjct: 88 IFCAFSKNKPFNKLLCARIGPSLFHNWTK 2
Score = 197 bits (424), Expect = 2e-049
Identities = 92/131 (70%), Positives = 102/131 (77%)
Frame = +1 / -1
Query: 571 SSFGPTP*R*LHCSDSQH*RCGHWLEQDFQSSALQLR*HP*CRQRFSETDPHQQASRALS 750
SS+ PTP*+*LHC SQ *R HWLEQ FQSS QL+ HP*C+Q+FS T HQ+AS AL
Sbjct: 395 SSYQPTP*Q*LHCQGSQR*RYDHWLEQGFQSSKEQLQWHP*CKQKFSGTRRHQRASGALC 216
Query: 751 GADCY*SKPKPEAHPR*DHRHQE*NPSLAQSN*KVSRL*IQGHFLHLQQIQASQ*VASRK 930
DC *SKPKPE HPR*DH+ QE*+PSLAQSN*KVS+ * QGHFL LQQ QA Q* A R
Sbjct: 215 VRDCC*SKPKPEEHPR*DHQRQE*SPSLAQSN*KVSQS*NQGHFLRLQQKQAFQ*AALRT 36
Query: 931 HRTIFVSRLDQ 963
HRTI VS+LDQ
Sbjct: 35 HRTISVSQLDQ 3
Score = 193 bits (416), Expect = 2e-048
Identities = 100/146 (68%), Positives = 106/146 (72%)
Frame = -1 / +3
Query: 963 LVQS*NKDGPMLARSNLLRGLYLLKVQKMALNSQS*DLLIGLGQGWISFLVSMVLARVCL 784
LVQ *N+DGPM A+S+LL+GL+LLK QKMAL S+ *DL IGLGQGW SFL MVLARV L
Sbjct: 3 LVQL*NRDGPMRAQSSLLKGLFLLKAQKMALISRL*DLSIGLGQGWTSFLALMVLARVFL 182
Query: 783 GFWLASVTICSGESP*SLLMGVSLREPLSTSRMLSKL*C**LKILLEPMATSSMLGIRTM 604
GFWLAS TI ESP*S LM S RE L TSRM KL **LK LLEPM SS LG TM
Sbjct: 183 GFWLASATISYAESP*SSLMAASPRELLFTSRMPLKLFF**LKTLLEPMVISSTLGTLTM 362
Query: 603 KLPLGSWPK**QRSTQMSQERHRWMS 526
K LGSW **QRS SQE RW S
Sbjct: 363 KSLLGSWLI**QRSMLRSQESPRWRS 440
Score = 166 bits (356), Expect(2) = 3e-048
Identities = 67/94 (71%), Positives = 75/94 (79%)
Frame = -2 / +1
Query: 962 WSNRETKMVLCLREATY*EACIC*RCRKWP*IHNRETF*LDWAKDGFHSWCRWS*RGCAS 783
WSN ET+MVLC+R+A Y*+AC C*R RKWP* H+ ETF LDWAKDG HSW WS*RGC+S
Sbjct: 4 WSNCETEMVLCVRKAAY*KACFC*RRRKWP*FHDCETFQLDWAKDGLHSWR*WS*RGCSS 183
Query: 782 GFGLLQ*QSAPERALEAC*WGSVSENLCLHQGCY 681
GFGLLQ QS +RA EA *W V EN CLHQGC+
Sbjct: 184 GFGLLQQQSLTQRAPEAR*WRRVPENFCLHQGCH 285
Score = 47.3 bits (97), Expect(2) = 3e-048
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = -2 / +1
Query: 641 QWPHLQCWESEQ*SYR*GVGPNDDRGLRKCLRRGTAG*AHD 519
QW +LQ WE Q*S+ *GVG DDRGL LRR AG A D
Sbjct: 325 QWSYLQRWEP*Q*SHC*GVG*YDDRGLC*GLRRAPAGGACD 447
>gb|BG417706.1|BG417706 HVSMEk0019D05f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0019D05f, mRNA sequence
Length = 445
Score = 338 bits (732), Expect = 6e-092
Identities = 135/148 (91%), Positives = 144/148 (97%)
Frame = -3 / +2
Query: 844 WIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVVL 665
WIGPRMDFIPGVDGPSEGVPRVLACF NNLLRREPLKLVDGG+SQRTFVYIKDAIEAV+L
Sbjct: 2 WIGPRMDFIPGVDGPSEGVPRVLACFXNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLL 181
Query: 664 MIENPARANGHIFNVGNPNNEVTVRELAQMMTEVYANVSGEAPLDEPMIDVSSSQFYGEG 485
MIENPARANGHIFNVGNP+NEVTVRELA+MMTEVYA VSGE PL+EP+IDVS+ +FYGEG
Sbjct: 182 MIENPARANGHIFNVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVIDVSAKEFYGEG 361
Query: 484 YDDSDKRIPDMTIINKQLGWNPKTPLKD 401
YDDSDKRIPDMT+INKQLGWNPKTPLKD
Sbjct: 362 YDDSDKRIPDMTLINKQLGWNPKTPLKD 445
Score = 245 bits (529), Expect = 6e-064
Identities = 101/148 (68%), Positives = 121/148 (81%)
Frame = +2 / -1
Query: 401 ILERRLWVPT*LLVDYSHVGDPLVAIIVSFAVELTRAHVNHGLIQRCLS*DICVDLCHHL 580
+LER L VP *LLVD HVGDPLVA++V FAVE RAHV+H L+QR LS*D+ +DLCHH
Sbjct: 445 VLERGLGVPP*LLVDQGHVGDPLVAVVVPFAVEFFRAHVDHRLLQRGLS*DLSIDLCHHF 266
Query: 581 GQLPNGNFIVRIPNIEDVAIGSSRIFNHQHYSFDSILDVDKGSLRLTPINKLQGLSPEQI 760
QLPN +FIVR+PN+E + IGSSR+FNHQ SF+ ILDV+K SL L I++LQGLS +I
Sbjct: 265 SQLPNSDFIVRVPNVEYMTIGSSRVFNHQKNSFNGILDVNKSSLGLAAIDELQGLSA*EI 86
Query: 761 VTEASQNPRHTLARTIDTRNEIHPWPNP 844
V EASQNPR+TLARTI+ RNE+HPWPNP
Sbjct: 85 VXEASQNPRNTLARTINARNEVHPWPNP 2
Score = 185 bits (399), Expect(2) = 1e-047
Identities = 87/111 (78%), Positives = 89/111 (80%)
Frame = +3 / -2
Query: 513 TSIMGSSSGASPETFA*TSVIIWANSLTVTSLFGFPTLKMWPLARAGFXXXXXXXXXXXL 692
TSI GSSSG SPET A*TSVII ANSLTVTSL GFPTL + PLARAGF L
Sbjct: 333 TSITGSSSGGSPETLA*TSVIISANSLTVTSLSGFPTLNI*PLARAGFSIIRRTASMASL 154
Query: 693 M*TKVL*D*PPSTSFKGSLRSRLLLKQAKTRGTPSLGPSTPGMKSILGPIQ 845
M*TKVL D PPSTSF+GSLR RLL KQAKTRGTPSLGPSTPGMKSILGPIQ
Sbjct: 153 M*TKVLWDSPPSTSFRGSLRRRLLXKQAKTRGTPSLGPSTPGMKSILGPIQ 1
Score = 182 bits (393), Expect = 3e-045
Identities = 101/147 (68%), Positives = 102/147 (69%)
Frame = -1 / +3
Query: 843 GLGQGWISFLVSMVLARVCLGFWLASVTICSGESP*SLLMGVSLREPLSTSRMLSKL*C* 664
GLGQGW SFL MVLARV LGFWLAS TI ESP*S M S RE L TSRM KL *
Sbjct: 3 GLGQGWTSFLALMVLARVFLGFWLASXTISYAESP*SSSMAASPRELLFTSRMPLKLFF* 182
Query: 663 *LKILLEPMATSSMLGIRTMKLPLGSWPK**QRSTQMSQERHRWMSP*LT*ARVSSTAKD 484
*LK LLEPM S LG TMK LGSW K**QRS SQE RW S * T*AR +STAK
Sbjct: 183 *LKTLLEPMVIYSTLGTLTMKSLLGSWLK**QRSMLRSQESPRWRSL*ST*ARKNSTAKG 362
Query: 483 TMIATRGSPT*L*STSS*VGTQRRLSR 403
T ATRGSPT* *STSS* GT R LSR
Sbjct: 363 TTTATRGSPT*P*STSS*GGTPRPLSR 443
Score = 138 bits (297), Expect = 6e-032
Identities = 62/91 (68%), Positives = 70/91 (76%)
Frame = +1 / -3
Query: 571 SSFGPTP*R*LHCSDSQH*RCGHWLEQDFQSSALQLR*HP*CRQRFSETDPHQQASRALS 750
SSF PTP*+*LHC SQ * HWLEQ FQSS QL+ HP*C+Q+FS T H++AS AL
Sbjct: 275 SSFQPTP*Q*LHCQGSQR*IYDHWLEQGFQSSEEQLQWHP*CKQKFSGTRRHRRASGALC 96
Query: 751 GADCY*SKPKPEAHPR*DHRHQE*NPSLAQS 843
DC *SKPKPE HPR*DH+ QE*+PSLAQS
Sbjct: 95 VGDCX*SKPKPEEHPR*DHQRQE*SPSLAQS 3
Score = 97.7 bits (207), Expect(2) = 3e-042
Identities = 48/80 (60%), Positives = 55/80 (68%)
Frame = -2 / +1
Query: 641 QWPHLQCWESEQ*SYR*GVGPNDDRGLRKCLRRGTAG*AHD*RELESVLXXXXXXXRQED 462
QW ++Q WE Q*S+ *GVG NDDRGL LRR AG A D RE E +L RQED
Sbjct: 205 QWSYIQRWEP*Q*SHC*GVG*NDDRGLC*GLRRAPAGGACDRRERERILRRRVRRQRQED 384
Query: 461 PRHDYNQQAARLEPKDASQG 402
PRHD +QQAAR+EP+D SQG
Sbjct: 385 PRHDPDQQAARVEPQDPSQG 444
Score = 95.5 bits (202), Expect(2) = 3e-042
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = -2 / +1
Query: 845 LDWAKDGFHSWCRWS*RGCASGFGLLQ*QSAPERALEAC*WGSVSENLCLHQGCY 681
LDWAKDG HSW WS*RGC+SGFGLL QS +RA EA W V EN CLHQGC+
Sbjct: 1 LDWAKDGLHSWR*WS*RGCSSGFGLLXQQSPTQRAPEARRWRRVPENFCLHQGCH 165
Score = 25.8 bits (50), Expect(2) = 1e-047
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / -2
Query: 420 GFQPSCLLIIVM 455
GF PSCLLI VM
Sbjct: 426 GFHPSCLLIRVM 391
>gb|CK123655.1|CK123655 BES1824104n08 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N084 5-PRIME, mRNA sequence
Length = 704
Score = 303 bits (657), Expect = 1e-081
Identities = 124/141 (87%), Positives = 135/141 (95%)
Frame = -3 / +1
Query: 742 PLKLVDGGQSQRTFVYIKDAIEAVVLMIENPARANGHIFNVGNPNNEVTVRELAQMMTEV 563
PLKLVDGG+SQRTFVYIKDAIEAV+LMIENPARANGHIFNVGNP+NEVTVRELA+MMTEV
Sbjct: 13 PLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPDNEVTVRELAEMMTEV 192
Query: 562 YANVSGEAPLDEPMIDVSSSQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLETTL 383
YA VSGE PL+EP+IDVS+ +FYGEGYDDSDKRIPDMT+INKQLGWNPKTPLKDLLETTL
Sbjct: 193 YAKVSGEPPLEEPVIDVSAKEFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTL 372
Query: 382 TYQHKTYKEAVKRQMSQASAS 320
TYQHKTYKEAVK QM A+A+
Sbjct: 373 TYQHKTYKEAVKTQMCLATAT 435
Score = 202 bits (435), Expect = 5e-051
Identities = 86/134 (64%), Positives = 103/134 (76%)
Frame = +2 / -3
Query: 338 HLPFHSFFVCLVLIRQRCLQQILERRLWVPT*LLVDYSHVGDPLVAIIVSFAVELTRAHV 517
HL F VCLVL+ Q LQQ+LER L VP *LLVD HVGDPLVA++V FAVE RAHV
Sbjct: 417 HLCLDGFLVCLVLVGQSRLQQVLERGLGVPP*LLVDQGHVGDPLVAVVVPFAVEFFRAHV 238
Query: 518 NHGLIQRCLS*DICVDLCHHLGQLPNGNFIVRIPNIEDVAIGSSRIFNHQHYSFDSILDV 697
+H L+QR LS*D+ +DLCHH QLPN +FIVR+PN+E + IGSSR+FNHQ SF+ ILDV
Sbjct: 237 DHRLLQRGLS*DLSIDLCHHFSQLPNSDFIVRVPNVEYMTIGSSRVFNHQKNSFNGILDV 58
Query: 698 DKGSLRLTPINKLQ 739
+K SL L I++LQ
Sbjct: 57 NKSSLGLAAIDELQ 16
Score = 144 bits (308), Expect = 2e-033
Identities = 83/126 (65%), Positives = 85/126 (67%)
Frame = -1 / +2
Query: 738 *SLLMGVSLREPLSTSRMLSKL*C**LKILLEPMATSSMLGIRTMKLPLGSWPK**QRST 559
*S M S RE L TSRM KL **LK LLEPM S LG TMK LGSW K**QRS
Sbjct: 17 *SSSMAASPRELLFTSRMPLKLFF**LKTLLEPMVIYSTLGTLTMKSLLGSWLK**QRSM 196
Query: 558 QMSQERHRWMSP*LT*ARVSSTAKDTMIATRGSPT*L*STSS*VGTQRRLSRICWRQR*R 379
SQE RW S * T*AR +STAK T ATRGSPT* *STSS* GT R LSR CWR+ *
Sbjct: 197 LRSQESPRWRSL*ST*ARKNSTAKGTTTATRGSPT*P*STSS*GGTPRPLSRTCWRRL*P 376
Query: 378 ISTRHT 361
STRHT
Sbjct: 377 TSTRHT 394
Score = 124 bits (266), Expect(2) = 8e-032
Identities = 60/104 (57%), Positives = 73/104 (70%)
Frame = -2 / +3
Query: 641 QWPHLQCWESEQ*SYR*GVGPNDDRGLRKCLRRGTAG*AHD*RELESVLXXXXXXXRQED 462
QW ++Q WE Q*S+ *GVG NDDRGL LRR AG A D RE E +L RQED
Sbjct: 114 QWSYIQRWEP*Q*SHC*GVG*NDDRGLC*GLRRAPAGGACDRRERERILRRRVRRQRQED 293
Query: 461 PRHDYNQQAARLEPKDASQGSAGDNADVSAQDIQRSCEKANVAG 330
PRHD +QQAAR+EP+D SQG AGD++D+ AQDIQ S + +V+G
Sbjct: 294 PRHDPDQQAARVEPQDPSQGPAGDDSDLPAQDIQGSRQDTDVSG 425
Score = 112 bits (239), Expect(3) = 6e-033
Identities = 55/77 (71%), Positives = 56/77 (72%)
Frame = +3 / -1
Query: 513 TSIMGSSSGASPETFA*TSVIIWANSLTVTSLFGFPTLKMWPLARAGFXXXXXXXXXXXL 692
TSI GSSSG SPET A*TSVII ANSLTVTSL GFPTL + PLARAGF L
Sbjct: 242 TSITGSSSGGSPETLA*TSVIISANSLTVTSLSGFPTLNI*PLARAGFSIIRRTASMASL 63
Query: 693 M*TKVL*D*PPSTSFKG 743
M*TKVL D PPSTSF G
Sbjct: 62 M*TKVLWDSPPSTSFSG 12
Score = 41.8 bits (85), Expect(3) = 6e-033
Identities = 21/36 (58%), Positives = 22/36 (61%)
Frame = +1 / -2
Query: 331 PATFAFSQLLCMSCADTSALSPADP*EASLGSNLAA 438
P T +L CMSCA S SPA P*E S GS LAA
Sbjct: 424 PDTSVS*RLPCMSCAGRSESSPAGP*EGSWGSTLAA 317
Score = 33.6 bits (67), Expect(2) = 8e-032
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2 / +3
Query: 737 EAC*WGSVSENLCLHQGCY 681
EA W V EN CLHQGC+
Sbjct: 18 EARRWRRVPENFCLHQGCH 74
Score = 25.8 bits (50), Expect(3) = 6e-033
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / -1
Query: 420 GFQPSCLLIIVM 455
GF PSCLLI VM
Sbjct: 335 GFHPSCLLIRVM 300
>gb|BU974454.1|BU974454 HB27P18r BC Hordeum vulgare subsp. vulgare cDNA clone HB27P18
5-PRIME, mRNA sequence
Length = 458
Score = 300 bits (650), Expect = 1e-080
Identities = 123/140 (87%), Positives = 134/140 (95%)
Frame = -3 / +2
Query: 739 LKLVDGGQSQRTFVYIKDAIEAVVLMIENPARANGHIFNVGNPNNEVTVRELAQMMTEVY 560
LKLVDGG+SQRTFVYIKDAIEAV+LMIENPARANGHIFNVGNP+NEVTVRELA+MMTEVY
Sbjct: 11 LKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPDNEVTVRELAEMMTEVY 190
Query: 559 ANVSGEAPLDEPMIDVSSSQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLETTLT 380
A VSGE PL+EP+IDVS+ +FYGEGYDDSDKRIPDMT+INKQLGWNPKTPLKDLLETTLT
Sbjct: 191 AKVSGEPPLEEPVIDVSAKEFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLT 370
Query: 379 YQHKTYKEAVKRQMSQASAS 320
YQHKTYKEAVK QM A+A+
Sbjct: 371 YQHKTYKEAVKTQMCLATAT 430
Score = 202 bits (435), Expect = 5e-051
Identities = 86/134 (64%), Positives = 103/134 (76%)
Frame = +2 / -2
Query: 338 HLPFHSFFVCLVLIRQRCLQQILERRLWVPT*LLVDYSHVGDPLVAIIVSFAVELTRAHV 517
HL F VCLVL+ Q LQQ+LER L VP *LLVD HVGDPLVA++V FAVE RAHV
Sbjct: 412 HLCLDGFLVCLVLVGQSRLQQVLERGLGVPP*LLVDQGHVGDPLVAVVVPFAVEFFRAHV 233
Query: 518 NHGLIQRCLS*DICVDLCHHLGQLPNGNFIVRIPNIEDVAIGSSRIFNHQHYSFDSILDV 697
+H L+QR LS*D+ +DLCHH QLPN +FIVR+PN+E + IGSSR+FNHQ SF+ ILDV
Sbjct: 232 DHRLLQRGLS*DLSIDLCHHFSQLPNSDFIVRVPNVEYMTIGSSRVFNHQKNSFNGILDV 53
Query: 698 DKGSLRLTPINKLQ 739
+K SL L I++LQ
Sbjct: 52 NKSSLGLAAIDELQ 11
Score = 144 bits (308), Expect = 2e-033
Identities = 83/126 (65%), Positives = 85/126 (67%)
Frame = -1 / +3
Query: 738 *SLLMGVSLREPLSTSRMLSKL*C**LKILLEPMATSSMLGIRTMKLPLGSWPK**QRST 559
*S M S RE L TSRM KL **LK LLEPM S LG TMK LGSW K**QRS
Sbjct: 12 *SSSMAASPRELLFTSRMPLKLFF**LKTLLEPMVIYSTLGTLTMKSLLGSWLK**QRSM 191
Query: 558 QMSQERHRWMSP*LT*ARVSSTAKDTMIATRGSPT*L*STSS*VGTQRRLSRICWRQR*R 379
SQE RW S * T*AR +STAK T ATRGSPT* *STSS* GT R LSR CWR+ *
Sbjct: 192 LRSQESPRWRSL*ST*ARKNSTAKGTTTATRGSPT*P*STSS*GGTPRPLSRTCWRRL*P 371
Query: 378 ISTRHT 361
STRHT
Sbjct: 372 TSTRHT 389
Score = 124 bits (266), Expect(2) = 8e-032
Identities = 60/104 (57%), Positives = 73/104 (70%)
Frame = -2 / +1
Query: 641 QWPHLQCWESEQ*SYR*GVGPNDDRGLRKCLRRGTAG*AHD*RELESVLXXXXXXXRQED 462
QW ++Q WE Q*S+ *GVG NDDRGL LRR AG A D RE E +L RQED
Sbjct: 109 QWSYIQRWEP*Q*SHC*GVG*NDDRGLC*GLRRAPAGGACDRRERERILRRRVRRQRQED 288
Query: 461 PRHDYNQQAARLEPKDASQGSAGDNADVSAQDIQRSCEKANVAG 330
PRHD +QQAAR+EP+D SQG AGD++D+ AQDIQ S + +V+G
Sbjct: 289 PRHDPDQQAARVEPQDPSQGPAGDDSDLPAQDIQGSRQDTDVSG 420
Score = 109 bits (233), Expect(3) = 4e-032
Identities = 54/75 (72%), Positives = 55/75 (73%)
Frame = +3 / -3
Query: 513 TSIMGSSSGASPETFA*TSVIIWANSLTVTSLFGFPTLKMWPLARAGFXXXXXXXXXXXL 692
TSI GSSSG SPET A*TSVII ANSLTVTSL GFPTL + PLARAGF L
Sbjct: 237 TSITGSSSGGSPETLA*TSVIISANSLTVTSLSGFPTLNI*PLARAGFSIIRRTASMASL 58
Query: 693 M*TKVL*D*PPSTSF 737
M*TKVL D PPSTSF
Sbjct: 57 M*TKVLWDSPPSTSF 13
Score = 41.8 bits (85), Expect(3) = 4e-032
Identities = 21/36 (58%), Positives = 22/36 (61%)
Frame = +1 / -1
Query: 331 PATFAFSQLLCMSCADTSALSPADP*EASLGSNLAA 438
P T +L CMSCA S SPA P*E S GS LAA
Sbjct: 419 PDTSVS*RLPCMSCAGRSESSPAGP*EGSWGSTLAA 312
Score = 33.6 bits (67), Expect(2) = 8e-032
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2 / +1
Query: 737 EAC*WGSVSENLCLHQGCY 681
EA W V EN CLHQGC+
Sbjct: 13 EARRWRRVPENFCLHQGCH 69
Score = 25.8 bits (50), Expect(3) = 4e-032
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / -3
Query: 420 GFQPSCLLIIVM 455
GF PSCLLI VM
Sbjct: 330 GFHPSCLLIRVM 295
>gb|BG299537.1|BG299537 HVSMEa0020K13f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0020K13f, mRNA sequence
Length = 607
Score = 298 bits (646), Expect(2) = 1e-080
Identities = 123/148 (83%), Positives = 131/148 (88%)
Frame = -3 / +3
Query: 1462 DLDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLAVDVYCDKIRHLVDPAPPHLAG 1283
DLDG +VAPLTICMIGAGGFIGSHLCEKLMAET+HVVLAVDVY DKIRHLVDP PP+LAG
Sbjct: 150 DLDGGAVAPLTICMIGAGGFIGSHLCEKLMAETQHVVLAVDVYSDKIRHLVDPPPPNLAG 329
Query: 1282 RISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 1103
R+SFHRLNIKND RLEGL+KMADLTINLAAICTPADYNTRPLDTIYSNFID LPVVKY
Sbjct: 330 RMSFHRLNIKNDPRLEGLVKMADLTINLAAICTPADYNTRPLDTIYSNFIDPLPVVKYLL 509
Query: 1102 ENSKRLIHFSTCEVYGKTIGSFLPKDHP 1019
EN KRLIHFSTCEV + + P+ P
Sbjct: 510 ENGKRLIHFSTCEVLARPSAASFPRITP 593
Score = 242 bits (522), Expect(2) = 2e-068
Identities = 108/131 (82%), Positives = 113/131 (86%)
Frame = +3 / -1
Query: 1062 TSHVEKWMRRLLFSEQYLTTGSASMKLL*MVSRGRVL*SAGVQIAARLMVRSAILMSPSS 1241
TSHVEKW+RRL FS +YLTTGS SMKLL*MVS GRVL*SAGVQIAAR +VRSAIL PS
Sbjct: 550 TSHVEKWIRRLPFSSKYLTTGSGSMKLL*MVSSGRVL*SAGVQIAARFIVRSAILTRPSR 371
Query: 1242 LESFLMLRRWKEMRPARCGGAGSTRWRILSQYTSTARTTWRVSAMSFSQRWEPMKPPAPI 1421
SFLMLRRWK+MRPAR GG GSTRWRILS+ TSTARTT VSAMSFSQRWEPMKPPAPI
Sbjct: 370 RGSFLMLRRWKDMRPARLGGGGSTRWRILSE*TSTARTTCWVSAMSFSQRWEPMKPPAPI 191
Query: 1422 MQMVRGATELP 1454
MQMV GAT P
Sbjct: 190 MQMVSGATAPP 158
Score = 141 bits (302), Expect(3) = 4e-048
Identities = 62/84 (73%), Positives = 68/84 (80%)
Frame = +2 / -3
Query: 1211 QIGHLDEPLEPGVILDVKAVEGDAPREVRRRGVDEVADLIAVYVDGEDDMARLGHELLAE 1390
QIGHLDE LE GV+LDV+AVEG AP +V RR V EVADL+ V VDGEDD+ GHEL AE
Sbjct: 401 QIGHLDEALEAGVVLDVEAVEGHAPGKVGRRRVXEVADLVGVDVDGEDDVLGFGHELFAE 222
Query: 1391 VGADEAAGANHADGEGRDGVAVQI 1462
VGADEAAGA+HADGE R G AVQI
Sbjct: 221 VGADEAAGADHADGERRHGAAVQI 150
Score = 116 bits (249), Expect(3) = 5e-028
Identities = 48/68 (70%), Positives = 51/68 (75%)
Frame = +1 / -2
Query: 1060 RPRTWRSG*DACCSRSST*PLGVHR*SCCRWCQGGECCSPPACR*PPG*WSDRPS**APR 1239
RPRTW+SG DAC SR+ST*P G R*SCCRWC+ CCSPPACR PPG SDRPS* PR
Sbjct: 552 RPRTWKSGSDACRSRAST*PPGAGR*SCCRWCRAAACCSPPACRSPPGLSSDRPS*RGPR 373
Query: 1240 AWSHS*C* 1263
S*C*
Sbjct: 372 GGGRS*C* 349
Score = 57.9 bits (120), Expect(3) = 4e-048
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +2 / -3
Query: 1061 DLARGEVDETLAVLGAVLDHWECIDEVAVDGVK 1159
DLARG+VD+TLAVL VLDH E +DEVAVDGV+
Sbjct: 551 DLARGKVDQTLAVLEQVLDHRERVDEVAVDGVE 453
Score = 39.1 bits (79), Expect(2) = 2e-068
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1 / -3
Query: 1009 PCGAGGLWGGSCRWSC 1056
PCG G W GSCRWSC
Sbjct: 602 PCGGGYPWEGSCRWSC 555
Score = 32.2 bits (64), Expect(3) = 4e-048
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2 / -1
Query: 1007 FLAERVVFGEEAADGLA 1057
FLAE V+ G+EAADGLA
Sbjct: 604 FLAEGVILGKEAADGLA 554
Score = 29.9 bits (59), Expect(3) = 5e-028
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -2
Query: 1417 QSCRW*GARRSCRPDP 1464
+SCRW* A R RPDP
Sbjct: 195 RSCRW*AAPRRRRPDP 148
Score = 22.6 bits (43), Expect(2) = 1e-080
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3 / +1
Query: 1585 PRRTPCRGASRAHSPSRATXTR 1520
P P R AHSPSR R
Sbjct: 19 PSPNPTRPDPHAHSPSRRGSDR 84
Score = 21.7 bits (41), Expect(3) = 5e-028
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1 / -1
Query: 1537 GTGNARGSLPGTGFSW 1584
GTGNARG W
Sbjct: 67 GTGNARGDRVWLDLGW 20
>gb|BI950324.1|BI950324 HVSMEl0020E03f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0020E03f, mRNA sequence
Length = 469
Score = 299 bits (647), Expect = 3e-080
Identities = 124/154 (80%), Positives = 131/154 (85%)
Frame = -3 / +1
Query: 1228 IKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKT 1049
+KMADLTINLAAIC PADYNTRPLDTIYSNFIDALPVVKYCSEN KRLIHFSTCEVYGKT
Sbjct: 1 VKMADLTINLAAICAPADYNTRPLDTIYSNFIDALPVVKYCSENGKRLIHFSTCEVYGKT 180
Query: 1048 IGSFLPKDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLE 869
IGSFLPKDHPLRKE EFYVL EDESPCIFGPIVKQRWSYACAKQLIER FAEGA+NGL+
Sbjct: 181 IGSFLPKDHPLRKEAEFYVLTEDESPCIFGPIVKQRWSYACAKQLIERACFAEGADNGLD 360
Query: 868 FTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACF 767
FTIV+ F+ +G V + GV V ACF
Sbjct: 361 FTIVKTFH*LGQGWTSFLAVMALARGVXWVFACF 462
Score = 214 bits (462), Expect(2) = 2e-061
Identities = 92/132 (69%), Positives = 97/132 (73%)
Frame = +1 / -1
Query: 832 LAQSN*KVSRL*IQGHFLHLQQIQASQ*VASRKHRTIFVSRLDQKYRATHLL*EHKIQVP 1011
L N K SR * QGH L LQQ + SQ* A R HRTI VS+LDQ+ R THLL HKIQ+P
Sbjct: 397 LGPINGKFSRS*NQGHCLRLQQNKPSQ*AALRTHRTISVSQLDQRCRVTHLLSAHKIQLP 218
Query: 1012 CGAGGLWGGSCRWSCHRPRTWRSG*DACCSRSST*PLGVHR*SCCRWCQGGECCSPPACR 1191
CG G WGGSCRWSCHRPRTWRSG DAC S SST*P G R*SCCRWC+ CCSPPA R
Sbjct: 217 CGGGDPWGGSCRWSCHRPRTWRSGSDACRSPSST*PPGARR*SCCRWCRAAACCSPPARR 38
Query: 1192 *PPG*WSDRPS* 1227
PPG SDRPS*
Sbjct: 37 SPPGLSSDRPS* 2
Score = 211 bits (455), Expect(2) = 9e-059
Identities = 99/130 (76%), Positives = 104/130 (80%)
Frame = +3 / -3
Query: 837 PIQLKGLTIVNSRPFSAPSANTSLSISCFAQA*DHLCFTIGPKIQGDSSSLRT*NXXXXX 1016
P Q K TIV SRP SAPSA +LSISCFA A*DHLCFTIGPK+QGDSSS+ T*N
Sbjct: 392 PNQWKVFTIVKSRPLSAPSAKQALSISCFAHA*DHLCFTIGPKMQGDSSSVST*NSASLR 213
Query: 1017 XXXXXXXKLPMVLP*TSHVEKWMRRLLFSEQYLTTGSASMKLL*MVSRGRVL*SAGVQIA 1196
KLPMVLP*TSHVEKW+RRL FSEQYLTTGSASMKLL*MVS GRVL*SAG QIA
Sbjct: 212 RG*SLGRKLPMVLP*TSHVEKWIRRLPFSEQYLTTGSASMKLL*MVSSGRVL*SAGAQIA 33
Query: 1197 ARLMVRSAIL 1226
AR +VRSAIL
Sbjct: 32 ARFIVRSAIL 3
Score = 173 bits (373), Expect(2) = 9e-046
Identities = 76/101 (75%), Positives = 84/101 (83%)
Frame = +2 / -2
Query: 857 HDCEFKAIFCTFSKYKPLNKLLRASIGPSLFHDWTKNTGRLIFFKNIKFRFLAERVVFGE 1036
HD E KAI C FSK PLNKLL A IGPSLFH+WTK+ G LIF ++IKF FLAE V+ GE
Sbjct: 372 HDREIKAIVCAFSKTSPLNKLLCARIGPSLFHNWTKDAG*LIFCQHIKFSFLAEGVILGE 193
Query: 1037 EAADGLAIDLARGEVDETLAVLGAVLDHWECIDEVAVDGVK 1159
EAADGLAIDLARGEVD+TLAVL AVLDH E +DEVAVDGV+
Sbjct: 192 EAADGLAIDLARGEVDQTLAVLRAVLDHRERVDEVAVDGVE 70
Score = 111 bits (238), Expect(2) = 1e-030
Identities = 61/128 (47%), Positives = 68/128 (53%)
Frame = -1 / +2
Query: 1227 SRWPI*PSTWXXXXXXXXXXXXXXXXXXXXXSMHSQWSSTAPRTASVXXXXXXXXXXXXX 1048
SRWPI* TW S S+WSSTA RTASV
Sbjct: 2 SRWPI*R*TWRRSARRRTTTRGRSTPSTATSSTRSRWSSTARRTASV*STSPRARSMARP 181
Query: 1047 XXXXXPKTTRSARNLNFMFLKKMSRPVFLVQS*NKDGPMLARSNLLRGLYLLKVQKMALN 868
P+ T SAR LNFM +KMS P LVQ *N+DGPM A+S+LLRGL LLK Q MAL
Sbjct: 182 SAASSPRITPSARKLNFMC*QKMSHPASLVQL*NRDGPMRAQSSLLRGLVLLKAQTMALI 361
Query: 867 SQS*DLLI 844
S+S* L I
Sbjct: 362 SRS*KLSI 385
Score = 84.9 bits (179), Expect(3) = 1e-042
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = -2 / +3
Query: 1010 GT*ILCS*RR*VALYFWSNRETKMVLCLREATY*EACIC*RCRKWP*IHNRETF 849
G+*ILC+ RR*V L+ WSN ET+MVLC+R+A Y*E C*R R+WP* H+RE F
Sbjct: 219 GS*ILCADRR*VTLHLWSNCETEMVLCVRKAAY*EGLFC*RRRQWP*FHDRENF 380
Score = 84.0 bits (177), Expect(3) = 1e-042
Identities = 37/60 (61%), Positives = 39/60 (65%)
Frame = -2 / +3
Query: 1226 QDGRSDHQPGGYLHAGGXXXXXXXXXXXXXHRCTPSGQVLLREQQASHPLLHVRGLWQDH 1047
QDGRSD +PGG L AGG HR P GQVLL E+QAS PLLHVRGLWQDH
Sbjct: 3 QDGRSDDKPGGDLRAGGLQHAAARHHLQQLHRRAPGGQVLLGERQASDPLLHVRGLWQDH 182
Score = 43.7 bits (89), Expect(3) = 1e-042
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = -3 / +3
Query: 850 FNWIGPRMDFIPGVDGPSEG 791
F IGPRMDFIPG DGPSEG
Sbjct: 378 FPLIGPRMDFIPGGDGPSEG 437
Score = 42.8 bits (87), Expect(2) = 1e-030
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / +2
Query: 845 LDWAKDGFHSWCRWS*RGCASGF 777
+DWAKDG HSW W *RG GF
Sbjct: 383 IDWAKDGLHSWR*WP*RGVXLGF 451
Score = 42.8 bits (87), Expect(2) = 2e-061
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +3 / -1
Query: 777 KTRGTPSLGPSTPGMKSILGPIQLK 851
K + PSLGPS PGMKSILGPI K
Sbjct: 451 KPKXHPSLGPSPPGMKSILGPINGK 377
Score = 37.3 bits (75), Expect(2) = 9e-059
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 794 LARTIDTRNEIHPWPNPIK 850
LAR I RNE+HPWPN K
Sbjct: 434 LARAITARNEVHPWPNQWK 378
Score = 31.3 bits (62), Expect(2) = 9e-046
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / -2
Query: 781 PEAHPR*DHRHQE*NPSLAQS 843
P PR* H QE*+PSLAQS
Sbjct: 447 PXNTPR*GHHRQE*SPSLAQS 385
>gb|BI956263.1|BI956263 HVSMEn0001M04f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0001M04f,
mRNA sequence
Length = 605
Score = 283 bits (612), Expect(2) = 6e-076
Identities = 120/156 (76%), Positives = 130/156 (83%)
Frame = -3 / +3
Query: 1462 DLDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLAVDVYCDKIRHLVDPAPPHLAG 1283
DLDG +VAPLTICMIGAGGFIGSHLCEKLMAET+HVVLAVDVY DKIRHLVDP PPHLAG
Sbjct: 138 DLDGGAVAPLTICMIGAGGFIGSHLCEKLMAETQHVVLAVDVYSDKIRHLVDPPPPHLAG 317
Query: 1282 RISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 1103
RISFHRLNIKND RLEGL+KMADLTINLAAICTPADYNTR +DTIY NFIDALPVVKY
Sbjct: 318 RISFHRLNIKNDPRLEGLVKMADLTINLAAICTPADYNTRAVDTIYKNFIDALPVVKYWL 497
Query: 1102 ENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEPEFY 995
EN + L HF T + + + I F + PL K F+
Sbjct: 498 ENREPLNHFFTFQGFWQNIRKFPSQGSPLPKGT*FF 605
Score = 210 bits (453), Expect = 2e-053
Identities = 99/129 (76%), Positives = 105/129 (81%)
Frame = +3 / -2
Query: 1068 HVEKWMRRLLFSEQYLTTGSASMKLL*MVSRGRVL*SAGVQIAARLMVRSAILMSPSSLE 1247
+V+K +R FS QYLTTGSAS+K L*MVS RVL*SAGVQIAAR +VRSAIL PS
Sbjct: 532 NVKK*LRGSRFSNQYLTTGSASIKFL*MVSTARVL*SAGVQIAARFIVRSAILTRPSRRG 353
Query: 1248 SFLMLRRWKEMRPARCGGAGSTRWRILSQYTSTARTTWRVSAMSFSQRWEPMKPPAPIMQ 1427
SFLML RWKEMRPAR GG GSTR RILS+ TSTARTT VSAMSFSQRWEPMKPPAPIMQ
Sbjct: 352 SFLMLSRWKEMRPARWGGGGSTRCRILSE*TSTARTTCWVSAMSFSQRWEPMKPPAPIMQ 173
Query: 1428 MVRGATELP 1454
MV GAT P
Sbjct: 172 MVSGATAPP 146
Score = 143 bits (307), Expect(3) = 3e-039
Identities = 63/84 (75%), Positives = 69/84 (82%)
Frame = +2 / -1
Query: 1211 QIGHLDEPLEPGVILDVKAVEGDAPREVRRRGVDEVADLIAVYVDGEDDMARLGHELLAE 1390
QIGHLDE LE GV+LDV+ VEGDAP +V RR V EV DL+ V VDGEDD+ LGHELLAE
Sbjct: 389 QIGHLDEALEAGVVLDVEPVEGDAPGKVGRRRVXEVPDLVGVDVDGEDDVLGLGHELLAE 210
Query: 1391 VGADEAAGANHADGEGRDGVAVQI 1462
VGADEAAGA+HADGE R G AVQI
Sbjct: 209 VGADEAAGADHADGERRHGAAVQI 138
Score = 35.4 bits (71), Expect(3) = 3e-039
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2 / -1
Query: 1031 GEEAADGLAIDLARGEVDETLAVLGAVLDHWECIDEVAVDGV 1156
G + + L L R EV + LAVL VLDH + +++V VDGV
Sbjct: 569 GRKLPNVLPKALEREEVIKRLAVLQPVLDHRKRVNKVLVDGV 444
Score = 22.6 bits (43), Expect(3) = 3e-039
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1 / -3
Query: 1171 CSPPACR*PP 1200
C PPAC PP
Sbjct: 447 CQPPACCSPP 418
Score = 22.6 bits (43), Expect(2) = 6e-076
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3 / +1
Query: 1585 PRRTPCRGASRAHSPSRATXTR 1520
P P R AHSPSR R
Sbjct: 7 PSPNPTRPDPHAHSPSRRGSDR 72
>gb|AV917643.1|AV917643 AV917643 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10n14 3', mRNA sequence
Length = 663
Score = 272 bits (588), Expect = 4e-072
Identities = 111/127 (87%), Positives = 121/127 (95%)
Frame = -3 / -3
Query: 700 VYIKDAIEAVVLMIENPARANGHIFNVGNPNNEVTVRELAQMMTEVYANVSGEAPLDEPM 521
VYIKDAIEAV+LMIENPARANGHIFNVGNP+NEVTVRELA+MMTEVYA VSGE PL+EP+
Sbjct: 661 VYIKDAIEAVLLMIENPARANGHIFNVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPV 482
Query: 520 IDVSSSQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKRQ 341
IDVS+ +FYGEGYDDSDKRIPDMT+INKQLGWNPKTPLKDLLETTLTYQHKTYKEAVK Q
Sbjct: 481 IDVSAKEFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKTQ 302
Query: 340 MSQASAS 320
M A+A+
Sbjct: 301 MCLATAT 281
Score = 186 bits (400), Expect = 4e-046
Identities = 78/121 (64%), Positives = 93/121 (76%)
Frame = +2 / +2
Query: 338 HLPFHSFFVCLVLIRQRCLQQILERRLWVPT*LLVDYSHVGDPLVAIIVSFAVELTRAHV 517
HL SF V LVL+ Q LQQ+LER L VP *LLVD HVGDPLV ++V FAVE R HV
Sbjct: 299 HLRLDSFLVGLVLVGQSRLQQVLERGLGVPP*LLVDQGHVGDPLVTVVVPFAVEFFRTHV 478
Query: 518 NHGLIQRCLS*DICVDLCHHLGQLPNGNFIVRIPNIEDVAIGSSRIFNHQHYSFDSILDV 697
+H L+QR LS*D+ +DLCHH QLPN +FIVR+PN+ED+ IGSSR+FNHQ SF+ ILDV
Sbjct: 479 DHRLLQRGLS*DLSIDLCHHFSQLPNSDFIVRVPNVEDMTIGSSRVFNHQKNSFNGILDV 658
Query: 698 D 700
+
Sbjct: 659 N 661
Score = 132 bits (282), Expect = 7e-030
Identities = 75/114 (65%), Positives = 77/114 (67%)
Frame = -1 / -1
Query: 702 LSTSRMLSKL*C**LKILLEPMATSSMLGIRTMKLPLGSWPK**QRSTQMSQERHRWMSP 523
L TSRM KL **LK LLEPM SS LG TMK LGSW K**QRS SQE RW S
Sbjct: 663 LFTSRMPLKLFF**LKTLLEPMVISSTLGTLTMKSLLGSWLK**QRSMLRSQESPRWRSL 484
Query: 522 *LT*ARVSSTAKDTMIATRGSPT*L*STSS*VGTQRRLSRICWRQR*RISTRHT 361
* T* R +STAK T TRGSPT* *STSS* GT R LSR CWR+ * STR T
Sbjct: 483 *ST*VRKNSTAKGTTTVTRGSPT*P*STSS*GGTPRPLSRTCWRRL*PTSTRPT 322
Score = 131 bits (280), Expect(2) = 2e-030
Identities = 61/104 (58%), Positives = 74/104 (71%)
Frame = -2 / -2
Query: 641 QWPHLQCWESEQ*SYR*GVGPNDDRGLRKCLRRGTAG*AHD*RELESVLXXXXXXXRQED 462
QW +LQ WE Q*S+ *GVG NDDRGL LRR AG A D RE E +L QED
Sbjct: 602 QWSYLQRWEP*Q*SHC*GVG*NDDRGLC*GLRRAPAGGACDRRECERILRRRVRRQ*QED 423
Query: 461 PRHDYNQQAARLEPKDASQGSAGDNADVSAQDIQRSCEKANVAG 330
PRHD +QQAAR+EP+D SQG AGD++D+ AQD+Q SC+ A+V+G
Sbjct: 422 PRHDPDQQAARVEPQDPSQGPAGDDSDLPAQDLQGSCQDADVSG 291
Score = 91.8 bits (194), Expect(3) = 4e-027
Identities = 45/63 (71%), Positives = 46/63 (73%)
Frame = +3 / +3
Query: 513 TSIMGSSSGASPETFA*TSVIIWANSLTVTSLFGFPTLKMWPLARAGFXXXXXXXXXXXL 692
TSI GSSSG SPET A*TSVII ANSLTVTSL GFPTLK+ PLARAGF L
Sbjct: 474 TSITGSSSGGSPETLA*TSVIISANSLTVTSLSGFPTLKI*PLARAGFSIIKRTASMASL 653
Query: 693 M*T 701
M*T
Sbjct: 654 M*T 662
Score = 42.8 bits (87), Expect(3) = 4e-027
Identities = 22/36 (61%), Positives = 22/36 (61%)
Frame = +1 / +1
Query: 331 PATFAFSQLLCMSCADTSALSPADP*EASLGSNLAA 438
P T A QL C SCA S SPA P*E S GS LAA
Sbjct: 292 PDTSAS*QLPCRSCAGRSESSPAGP*EGSWGSTLAA 399
Score = 25.8 bits (50), Expect(3) = 4e-027
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 420 GFQPSCLLIIVM 455
GF PSCLLI VM
Sbjct: 381 GFHPSCLLIRVM 416
Score = 22.6 bits (43), Expect(2) = 2e-030
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -2 / -2
Query: 701 CLHQGCY 681
CLHQGC+
Sbjct: 662 CLHQGCH 642
>gb|BJ462434.1|BJ462434 BJ462434 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags28d08 5', mRNA sequence
Length = 380
Score = 266 bits (575), Expect = 3e-070
Identities = 107/118 (90%), Positives = 115/118 (97%)
Frame = -3 / +1
Query: 709 RTFVYIKDAIEAVVLMIENPARANGHIFNVGNPNNEVTVRELAQMMTEVYANVSGEAPLD 530
RTFVYIKDAIEAV+LMIENPARANGHIFNVGNP+NEVTVRELA+MMTEVYA VSGE PL+
Sbjct: 25 RTFVYIKDAIEAVLLMIENPARANGHIFNVGNPDNEVTVRELAEMMTEVYAKVSGEPPLE 204
Query: 529 EPMIDVSSSQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLETTLTYQHKTYKE 356
EP+IDVS+ +FYGEGYDDSDKRIPDMT+INKQLGWNPKTPLKDLLETTLTYQHKTYKE
Sbjct: 205 EPVIDVSAKEFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKTYKE 378
Score = 181 bits (390), Expect = 9e-045
Identities = 76/118 (64%), Positives = 91/118 (77%)
Frame = +2 / -3
Query: 356 FFVCLVLIRQRCLQQILERRLWVPT*LLVDYSHVGDPLVAIIVSFAVELTRAHVNHGLIQ 535
F V LVL+ Q LQQ+L R L VP *LLVD HVGDPLV ++V FAVE R HV+H L+Q
Sbjct: 378 FLVGLVLVGQSRLQQVLXRGLGVPP*LLVDQGHVGDPLVTVVVPFAVEFFRTHVDHRLLQ 199
Query: 536 RCLS*DICVDLCHHLGQLPNGNFIVRIPNIEDVAIGSSRIFNHQHYSFDSILDVDKGS 709
R LS*D+ +DLCHH QLPN +FIVR+PN+ED+ IGSSR+FNHQ SF+ ILDV+K S
Sbjct: 198 RGLS*DLSIDLCHHFSQLPNSDFIVRVPNVEDMTIGSSRVFNHQKNSFNGILDVNKSS 25
Score = 131 bits (280), Expect = 1e-029
Identities = 75/116 (64%), Positives = 77/116 (66%)
Frame = -1 / +2
Query: 708 EPLSTSRMLSKL*C**LKILLEPMATSSMLGIRTMKLPLGSWPK**QRSTQMSQERHRWM 529
E L TSRM KL **LK LLEPM SS LG TMK LGSW K**QRS SQE RW
Sbjct: 26 ELLFTSRMPLKLFF**LKTLLEPMVISSTLGTLTMKSLLGSWLK**QRSMLRSQESPRWR 205
Query: 528 SP*LT*ARVSSTAKDTMIATRGSPT*L*STSS*VGTQRRLSRICWRQR*RISTRHT 361
S * T* R +STAK T TRGSPT* *STSS* GT R L R CWR+ * STR T
Sbjct: 206 SL*ST*VRKNSTAKGTTTVTRGSPT*P*STSS*GGTPRPLXRTCWRRL*PTSTRPT 373
Score = 116 bits (248), Expect(2) = 6e-027
Identities = 56/96 (58%), Positives = 66/96 (68%)
Frame = -2 / +3
Query: 641 QWPHLQCWESEQ*SYR*GVGPNDDRGLRKCLRRGTAG*AHD*RELESVLXXXXXXXRQED 462
QW +LQ WE Q*S+ *GVG NDDRGL LRR AG A D RE E +L QED
Sbjct: 93 QWSYLQRWEP*Q*SHC*GVG*NDDRGLC*GLRRAPAGGACDRRECERILRRRVRRQ*QED 272
Query: 461 PRHDYNQQAARLEPKDASQGSAGDNADVSAQDIQRS 354
PRHD +QQAAR+EP+D S G AGD++D+ AQD+Q S
Sbjct: 273 PRHDPDQQAARVEPQDPSXGPAGDDSDLPAQDLQGS 380
Score = 97.7 bits (207), Expect(3) = 9e-027
Identities = 48/66 (72%), Positives = 49/66 (74%)
Frame = +3 / -1
Query: 513 TSIMGSSSGASPETFA*TSVIIWANSLTVTSLFGFPTLKMWPLARAGFXXXXXXXXXXXL 692
TSI GSSSG SPET A*TSVII ANSLTVTSL GFPTLK+ PLARAGF L
Sbjct: 221 TSITGSSSGGSPETLA*TSVIISANSLTVTSLSGFPTLKI*PLARAGFSIIKRTASMASL 42
Query: 693 M*TKVL 710
M*TKVL
Sbjct: 41 M*TKVL 24
Score = 35.4 bits (71), Expect(3) = 9e-027
Identities = 17/28 (60%), Positives = 17/28 (60%)
Frame = +1 / -2
Query: 355 LLCMSCADTSALSPADP*EASLGSNLAA 438
L C SCA S SPA P E S GS LAA
Sbjct: 379 LPCRSCAGRSESSPAGPXEGSWGSTLAA 296
Score = 25.8 bits (50), Expect(3) = 9e-027
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / -1
Query: 420 GFQPSCLLIIVM 455
GF PSCLLI VM
Sbjct: 314 GFHPSCLLIRVM 279
Score = 25.4 bits (49), Expect(2) = 6e-027
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2 / +3
Query: 707 NLCLHQGCY 681
N CLHQGC+
Sbjct: 27 NFCLHQGCH 53
>gb|BJ465099.1|BJ465099 BJ465099 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37m02 5', mRNA sequence
Length = 446
Score = 260 bits (563), Expect = 1e-068
Identities = 106/124 (85%), Positives = 117/124 (94%)
Frame = -3 / +1
Query: 691 KDAIEAVVLMIENPARANGHIFNVGNPNNEVTVRELAQMMTEVYANVSGEAPLDEPMIDV 512
+ AIEAV+LMIENPARANGHIFNVGNP+NEVTVRELA+MMTEVYA VSGE PL+EP+IDV
Sbjct: 43 RXAIEAVLLMIENPARANGHIFNVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVIDV 222
Query: 511 SSSQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKRQMSQ 332
S+ +FYGEGYDDSDKRIPDMT+INKQLGWNPKTPLKDLLETTLTYQHKTYKEAVK QM
Sbjct: 223 SAKEFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKTQMCL 402
Query: 331 ASAS 320
A+A+
Sbjct: 403 ATAT 414
Score = 177 bits (381), Expect = 2e-043
Identities = 74/115 (64%), Positives = 88/115 (76%)
Frame = +2 / -3
Query: 338 HLPFHSFFVCLVLIRQRCLQQILERRLWVPT*LLVDYSHVGDPLVAIIVSFAVELTRAHV 517
HL SF V LVL+ Q LQQ+LER L VP *LLVD HVGDPLV ++V FAVE R HV
Sbjct: 396 HLRLDSFLVGLVLVGQSRLQQVLERGLGVPP*LLVDQGHVGDPLVTVVVPFAVEFFRTHV 217
Query: 518 NHGLIQRCLS*DICVDLCHHLGQLPNGNFIVRIPNIEDVAIGSSRIFNHQHYSFD 682
+H L+QR LS*D+ +DLCHH QLPN +FIVR+PN+ED+ IGSSR+FNHQ SF+
Sbjct: 216 DHRLLQRGLS*DLSIDLCHHFSQLPNSDFIVRVPNVEDMTIGSSRVFNHQKNSFN 52
Score = 131 bits (280), Expect = 1e-029
Identities = 61/104 (58%), Positives = 74/104 (71%)
Frame = -2 / +3
Query: 641 QWPHLQCWESEQ*SYR*GVGPNDDRGLRKCLRRGTAG*AHD*RELESVLXXXXXXXRQED 462
QW +LQ WE Q*S+ *GVG NDDRGL LRR AG A D RE E +L QED
Sbjct: 93 QWSYLQRWEP*Q*SHC*GVG*NDDRGLC*GLRRAPAGGACDRRECERILRRRVRRQ*QED 272
Query: 461 PRHDYNQQAARLEPKDASQGSAGDNADVSAQDIQRSCEKANVAG 330
PRHD +QQAAR+EP+D SQG AGD++D+ AQD+Q SC+ A+V+G
Sbjct: 273 PRHDPDQQAARVEPQDPSQGPAGDDSDLPAQDLQGSCQDADVSG 404
Score = 124 bits (266), Expect = 1e-027
Identities = 70/106 (66%), Positives = 72/106 (67%)
Frame = -1 / +2
Query: 678 KL*C**LKILLEPMATSSMLGIRTMKLPLGSWPK**QRSTQMSQERHRWMSP*LT*ARVS 499
KL **LK LLEPM SS LG TMK LGSW K**QRS SQE RW S * T* R +
Sbjct: 56 KLFF**LKTLLEPMVISSTLGTLTMKSLLGSWLK**QRSMLRSQESPRWRSL*ST*VRKN 235
Query: 498 STAKDTMIATRGSPT*L*STSS*VGTQRRLSRICWRQR*RISTRHT 361
STAK T TRGSPT* *STSS* GT R LSR CWR+ * STR T
Sbjct: 236 STAKGTTTVTRGSPT*P*STSS*GGTPRPLSRTCWRRL*PTSTRPT 373
Score = 87.2 bits (184), Expect(3) = 8e-026
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = +3 / -1
Query: 513 TSIMGSSSGASPETFA*TSVIIWANSLTVTSLFGFPTLKMWPLARAGF 656
TSI GSSSG SPET A*TSVII ANSLTVTSL GFPTLK+ PLARAGF
Sbjct: 221 TSITGSSSGGSPETLA*TSVIISANSLTVTSLSGFPTLKI*PLARAGF 78
Score = 42.8 bits (87), Expect(3) = 8e-026
Identities = 22/36 (61%), Positives = 22/36 (61%)
Frame = +1 / -2
Query: 331 PATFAFSQLLCMSCADTSALSPADP*EASLGSNLAA 438
P T A QL C SCA S SPA P*E S GS LAA
Sbjct: 403 PDTSAS*QLPCRSCAGRSESSPAGP*EGSWGSTLAA 296
Score = 25.8 bits (50), Expect(3) = 8e-026
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / -1
Query: 420 GFQPSCLLIIVM 455
GF PSCLLI VM
Sbjct: 314 GFHPSCLLIRVM 279
>gb|CA027982.1|CA027982 HZ60K04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ60K04
5-PRIME, mRNA sequence
Length = 484
Score = 257 bits (555), Expect(2) = 4e-068
Identities = 105/112 (93%), Positives = 108/112 (96%)
Frame = -3 / +1
Query: 1462 DLDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLAVDVYCDKIRHLVDPAPPHLAG 1283
DLDG +VAPLTICMIGAGGFIGSHLCEKLMAET+HVVLAVDVY DKIRHLVDP PPHLAG
Sbjct: 148 DLDGGAVAPLTICMIGAGGFIGSHLCEKLMAETQHVVLAVDVYSDKIRHLVDPPPPHLAG 327
Query: 1282 RISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 1127
RISFHRLNIKND RLEGL+KMADLTINLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 328 RISFHRLNIKNDPRLEGLVKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 483
Score = 200 bits (432), Expect = 1e-050
Identities = 92/109 (84%), Positives = 94/109 (86%)
Frame = +3 / -3
Query: 1128 ASMKLL*MVSRGRVL*SAGVQIAARLMVRSAILMSPSSLESFLMLRRWKEMRPARCGGAG 1307
ASMKLL*MVS GRVL*SAGVQIAAR +VRSAIL PS SFLMLRRWKEMRPAR GG G
Sbjct: 482 ASMKLL*MVSSGRVL*SAGVQIAARFIVRSAILTRPSRRGSFLMLRRWKEMRPARWGGGG 303
Query: 1308 STRWRILSQYTSTARTTWRVSAMSFSQRWEPMKPPAPIMQMVRGATELP 1454
STRWRILS+ TSTARTT VSAMSFSQRWEPMKPPAPIMQMV GAT P
Sbjct: 302 STRWRILSE*TSTARTTCWVSAMSFSQRWEPMKPPAPIMQMVSGATAPP 156
Score = 153 bits (328), Expect(2) = 5e-037
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = +2 / -2
Query: 1211 QIGHLDEPLEPGVILDVKAVEGDAPREVRRRGVDEVADLIAVYVDGEDDMARLGHELLAE 1390
QIGHLDE LE GV+LDV+AVEGDAP EV RR VDEVADL+ V VDGEDD+ LGHELLAE
Sbjct: 399 QIGHLDEALEAGVVLDVEAVEGDAPGEVGRRRVDEVADLVGVDVDGEDDVLGLGHELLAE 220
Query: 1391 VGADEAAGANHADGEGRDGVAVQI 1462
VGADEAAGA+HADGE R G AVQI
Sbjct: 219 VGADEAAGADHADGERRHGAAVQI 148
Score = 22.6 bits (43), Expect(2) = 4e-068
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3 / +2
Query: 1585 PRRTPCRGASRAHSPSRATXTR 1520
P P R AHSPSR R
Sbjct: 17 PSPNPTRPDPHAHSPSRRGSDR 82
Score = 22.6 bits (43), Expect(2) = 5e-037
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / -2
Query: 1130 IDEVAVDGVK 1159
+DEVAVDGV+
Sbjct: 480 VDEVAVDGVE 451
>gb|BM373982.2|BM373982 EBma03_SQ003_E19_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_E19 5', mRNA sequence
Length = 450
Score = 228 bits (493), Expect(2) = 1e-059
Identities = 96/120 (80%), Positives = 100/120 (83%)
Frame = -3 / +2
Query: 1525 TRGRRTHMXXXXXXXXXXXXLDLDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLA 1346
TR RR +DLDG +VAPLTICMIGAGGFIGSHLCEKLMAET+HVVLA
Sbjct: 89 TRPRRATAGGARESMASGGRVDLDGGAVAPLTICMIGAGGFIGSHLCEKLMAETQHVVLA 268
Query: 1345 VDVYCDKIRHLVDPAPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNT 1166
VDVY DKIRHLVDP PPHLAGRISFHRLNIKND RLEGL+KMADLTINLAAICTPADYNT
Sbjct: 269 VDVYSDKIRHLVDPPPPHLAGRISFHRLNIKNDPRLEGLVKMADLTINLAAICTPADYNT 448
Score = 180 bits (387), Expect = 2e-044
Identities = 81/97 (83%), Positives = 83/97 (85%)
Frame = +3 / -1
Query: 1164 RVL*SAGVQIAARLMVRSAILMSPSSLESFLMLRRWKEMRPARCGGAGSTRWRILSQYTS 1343
RVL*SAGVQIAAR +VRSAIL PS SFLMLRRWKEMRPAR GG GSTRWRILS+ TS
Sbjct: 450 RVL*SAGVQIAARFIVRSAILTRPSRRGSFLMLRRWKEMRPARWGGGGSTRWRILSE*TS 271
Query: 1344 TARTTWRVSAMSFSQRWEPMKPPAPIMQMVRGATELP 1454
TARTT VSAMSFSQRWEPMKPPAPIMQMV GAT P
Sbjct: 270 TARTTCWVSAMSFSQRWEPMKPPAPIMQMVSGATAPP 160
Score = 153 bits (328), Expect = 3e-036
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = +2 / -3
Query: 1211 QIGHLDEPLEPGVILDVKAVEGDAPREVRRRGVDEVADLIAVYVDGEDDMARLGHELLAE 1390
QIGHLDE LE GV+LDV+AVEGDAP EV RR VDEVADL+ V VDGEDD+ LGHELLAE
Sbjct: 403 QIGHLDEALEAGVVLDVEAVEGDAPGEVGRRRVDEVADLVGVDVDGEDDVLGLGHELLAE 224
Query: 1391 VGADEAAGANHADGEGRDGVAVQI 1462
VGADEAAGA+HADGE R G AVQI
Sbjct: 223 VGADEAAGADHADGERRHGAAVQI 152
Score = 22.6 bits (43), Expect(2) = 1e-059
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3 / +3
Query: 1585 PRRTPCRGASRAHSPSRATXTR 1520
P P R AHSPSR R
Sbjct: 21 PSPNPTRPDPHAHSPSRRGSDR 86
>gb|BM374131.2|BM374131 EBma03_SQ003_L19_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_L19 5', mRNA sequence
Length = 509
Score = 226 bits (488), Expect(2) = 6e-059
Identities = 95/119 (79%), Positives = 99/119 (83%)
Frame = -3 / +1
Query: 1525 TRGRRTHMXXXXXXXXXXXXLDLDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLA 1346
TR RR +DLDG +VAPLTICMIGAGGFIGSHLCEKLMAET+HVVLA
Sbjct: 151 TRPRRATAGGARESMASGGRVDLDGGAVAPLTICMIGAGGFIGSHLCEKLMAETQHVVLA 330
Query: 1345 VDVYCDKIRHLVDPAPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYN 1169
VDVY DKIRHLVDP PPHLAGRISFHRLNIKND RLEGL+KMADLTINLAAICTPADYN
Sbjct: 331 VDVYSDKIRHLVDPPPPHLAGRISFHRLNIKNDPRLEGLVKMADLTINLAAICTPADYN 507
Score = 177 bits (382), Expect = 1e-043
Identities = 80/96 (83%), Positives = 82/96 (85%)
Frame = +3 / -1
Query: 1167 VL*SAGVQIAARLMVRSAILMSPSSLESFLMLRRWKEMRPARCGGAGSTRWRILSQYTST 1346
VL*SAGVQIAAR +VRSAIL PS SFLMLRRWKEMRPAR GG GSTRWRILS+ TST
Sbjct: 509 VL*SAGVQIAARFIVRSAILTRPSRRGSFLMLRRWKEMRPARWGGGGSTRWRILSE*TST 330
Query: 1347 ARTTWRVSAMSFSQRWEPMKPPAPIMQMVRGATELP 1454
ARTT VSAMSFSQRWEPMKPPAPIMQMV GAT P
Sbjct: 329 ARTTCWVSAMSFSQRWEPMKPPAPIMQMVSGATAPP 222
Score = 153 bits (328), Expect = 3e-036
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = +2 / -3
Query: 1211 QIGHLDEPLEPGVILDVKAVEGDAPREVRRRGVDEVADLIAVYVDGEDDMARLGHELLAE 1390
QIGHLDE LE GV+LDV+AVEGDAP EV RR VDEVADL+ V VDGEDD+ LGHELLAE
Sbjct: 465 QIGHLDEALEAGVVLDVEAVEGDAPGEVGRRRVDEVADLVGVDVDGEDDVLGLGHELLAE 286
Query: 1391 VGADEAAGANHADGEGRDGVAVQI 1462
VGADEAAGA+HADGE R G AVQI
Sbjct: 285 VGADEAAGADHADGERRHGAAVQI 214
Score = 22.6 bits (43), Expect(2) = 6e-059
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3 / +2
Query: 1585 PRRTPCRGASRAHSPSRATXTR 1520
P P R AHSPSR R
Sbjct: 83 PSPNPTRPDPHAHSPSRRGSDR 148
>gb|BM368508.2|BM368508 EBem08_SQ002_I21_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ002_I21 5', mRNA sequence
Length = 424
Score = 204 bits (439), Expect(2) = 3e-052
Identities = 87/112 (77%), Positives = 91/112 (81%)
Frame = -3 / +3
Query: 1525 TRGRRTHMXXXXXXXXXXXXLDLDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLA 1346
TR RR +DLDG +VAPLTICMIGAGGFIGSHLCEKLMAET+HVVLA
Sbjct: 87 TRPRRATAGGAREIMASGGRVDLDGGAVAPLTICMIGAGGFIGSHLCEKLMAETQHVVLA 266
Query: 1345 VDVYCDKIRHLVDPAPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAI 1190
VDVY DKIRHLVDP PPHLAGRISFHRLNIKND RLEGL+KMADLTINLA I
Sbjct: 267 VDVYSDKIRHLVDPPPPHLAGRISFHRLNIKNDPRLEGLVKMADLTINLAGI 422
Score = 158 bits (339), Expect = 1e-037
Identities = 70/89 (78%), Positives = 72/89 (80%)
Frame = +3 / -1
Query: 1188 QIAARLMVRSAILMSPSSLESFLMLRRWKEMRPARCGGAGSTRWRILSQYTSTARTTWRV 1367
QI AR +VRSAIL PS SFLML RWKEMRPAR GG GSTRWRILS+ TSTARTT V
Sbjct: 424 QIPARFIVRSAILTRPSRRGSFLMLSRWKEMRPARWGGGGSTRWRILSE*TSTARTTCWV 245
Query: 1368 SAMSFSQRWEPMKPPAPIMQMVRGATELP 1454
SAMSFSQRWEPM PPAPIMQMV GAT P
Sbjct: 244 SAMSFSQRWEPMNPPAPIMQMVSGATAPP 158
Score = 148 bits (318), Expect = 8e-035
Identities = 65/84 (77%), Positives = 70/84 (83%)
Frame = +2 / -3
Query: 1211 QIGHLDEPLEPGVILDVKAVEGDAPREVRRRGVDEVADLIAVYVDGEDDMARLGHELLAE 1390
QIGHLDE LE GV+LDV+ VEGDAP EV RR VDEVADL+ V VDGEDD+ LGHELLAE
Sbjct: 401 QIGHLDEALEAGVVLDVEPVEGDAPGEVGRRRVDEVADLVGVDVDGEDDVLGLGHELLAE 222
Query: 1391 VGADEAAGANHADGEGRDGVAVQI 1462
VGADE AGA+HADGE R G AVQI
Sbjct: 221 VGADEPAGADHADGERRHGAAVQI 150
Score = 22.6 bits (43), Expect(2) = 3e-052
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3 / +1
Query: 1585 PRRTPCRGASRAHSPSRATXTR 1520
P P R AHSPSR R
Sbjct: 19 PSPNPTRPDPHAHSPSRRGSDR 84
>gb|AL510624.1|AL510624 AL510624 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05I02u 3',
mRNA sequence
Length = 641
Score = 163 bits (350), Expect(4) = 8e-052
Identities = 65/78 (83%), Positives = 72/78 (92%)
Frame = -3 / -3
Query: 553 VSGEAPLDEPMIDVSSSQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLETTLTYQ 374
VSGE PL+EP+IDVS+ + YGEGYDDSDKRIPDMT+INKQLGWNPKTPLKDLLETTLTYQ
Sbjct: 483 VSGEPPLEEPVIDVSAKEXYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQ 304
Query: 373 HKTYKEAVKRQMSQASAS 320
HKTYKEAVK QM A+A+
Sbjct: 303 HKTYKEAVKTQMCLATAT 250
Score = 104 bits (221), Expect(3) = 2e-029
Identities = 47/73 (64%), Positives = 54/73 (73%)
Frame = +2 / +1
Query: 338 HLPFHSFFVCLVLIRQRCLQQILERRLWVPT*LLVDYSHVGDPLVAIIVSFAVELTRAHV 517
HL F VCLVL+ Q LQQ+LER L VP *LLVD HVGDPLVA++V FAV RAHV
Sbjct: 268 HLCLDGFLVCLVLVGQSRLQQVLERGLGVPP*LLVDQGHVGDPLVAVVVPFAVXFFRAHV 447
Query: 518 NHGLIQRCLS*DI 556
+H L+QR LS*D+
Sbjct: 448 DHRLLQRGLS*DL 486
Score = 46.0 bits (94), Expect(4) = 8e-052
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = -3 / -2
Query: 622 VGNPNNEVTVRELAQMMTEVYA 557
+G P+NEVTVRELA+MMTEVYA
Sbjct: 553 LGTPDNEVTVRELAEMMTEVYA 488
Score = 40.0 bits (81), Expect(3) = 2e-029
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2 / +2
Query: 554 ICVDLCHHLGQLPNGNFIVR 613
+ +DLCHH QLPN +FIVR
Sbjct: 485 LSIDLCHHFSQLPNSDFIVR 544
Score = 27.2 bits (53), Expect(4) = 8e-052
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -3 / -3
Query: 682 IEAVVLMIENPA 647
IEAV+LMIENPA
Sbjct: 615 IEAVLLMIENPA 580
Score = 25.4 bits (49), Expect(4) = 8e-052
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 643 ANGHIFNVGNP 611
AN HI NVGNP
Sbjct: 575 ANXHIXNVGNP 543
Score = 24.0 bits (46), Expect(3) = 2e-029
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2 / +1
Query: 638 IGSSRIFNHQHYSFD 682
+ SR+FNHQ SF+
Sbjct: 571 LAPSRVFNHQKNSFN 615
>gb|CB881530.1|CB881530 HM10B13w HM Hordeum vulgare subsp. vulgare cDNA clone HM10B13
3-PRIME, mRNA sequence
Length = 590
Score = 203 bits (437), Expect = 3e-051
Identities = 82/97 (84%), Positives = 91/97 (93%)
Frame = -3 / -1
Query: 610 NNEVTVRELAQMMTEVYANVSGEAPLDEPMIDVSSSQFYGEGYDDSDKRIPDMTIINKQL 431
+NEVTVRELA+MMTEVYA VSGE PL+EP+IDVS+ +FYGEGYDDSDKRIPDMT+INKQL
Sbjct: 590 DNEVTVRELAEMMTEVYAKVSGEPPLEEPVIDVSAKEFYGEGYDDSDKRIPDMTLINKQL 411
Query: 430 GWNPKTPLKDLLETTLTYQHKTYKEAVKRQMSQASAS 320
GWNPKTPLKDLLETTLTYQHKTYKEAVK QM A+A+
Sbjct: 410 GWNPKTPLKDLLETTLTYQHKTYKEAVKTQMCLATAT 300
Score = 140 bits (301), Expect = 2e-032
Identities = 60/91 (65%), Positives = 69/91 (75%)
Frame = +2 / +3
Query: 338 HLPFHSFFVCLVLIRQRCLQQILERRLWVPT*LLVDYSHVGDPLVAIIVSFAVELTRAHV 517
HL F VCLVL+ Q LQQ+LER L VP *LLVD HVGDPLVA++V FAVE RAHV
Sbjct: 318 HLCLDGFLVCLVLVGQSRLQQVLERGLGVPP*LLVDQGHVGDPLVAVVVPFAVEFFRAHV 497
Query: 518 NHGLIQRCLS*DICVDLCHHLGQLPNGNFIV 610
+H L+QR LS*D+ +DLCHH QLPN +FIV
Sbjct: 498 DHRLLQRGLS*DLSIDLCHHFSQLPNSDFIV 590
Score = 110 bits (234), Expect = 3e-023
Identities = 55/93 (59%), Positives = 66/93 (70%)
Frame = -2 / -3
Query: 608 Q*SYR*GVGPNDDRGLRKCLRRGTAG*AHD*RELESVLXXXXXXXRQEDPRHDYNQQAAR 429
Q*S+ *GVG NDDRGL LRR AG A D RE E +L RQEDPRHD +QQAAR
Sbjct: 588 Q*SHC*GVG*NDDRGLC*GLRRAPAGGACDRRERERILRRRVRRQRQEDPRHDPDQQAAR 409
Query: 428 LEPKDASQGSAGDNADVSAQDIQRSCEKANVAG 330
+EP+D SQG AGD++D+ AQDIQ S + +V+G
Sbjct: 408 VEPQDPSQGPAGDDSDLPAQDIQGSRQDTDVSG 310
Score = 109 bits (233), Expect = 4e-023
Identities = 58/83 (69%), Positives = 60/83 (72%)
Frame = -1 / -2
Query: 609 TMKLPLGSWPK**QRSTQMSQERHRWMSP*LT*ARVSSTAKDTMIATRGSPT*L*STSS* 430
TMK LGSW K**QRS SQE RW S * T*AR +STAK T ATRGSPT* *STSS*
Sbjct: 589 TMKSLLGSWLK**QRSMLRSQESPRWRSL*ST*ARKNSTAKGTTTATRGSPT*P*STSS* 410
Query: 429 VGTQRRLSRICWRQR*RISTRHT 361
GT R LSR CWR+ * STRHT
Sbjct: 409 GGTPRPLSRTCWRRL*PTSTRHT 341
>gb|AL509541.1|AL509541 AL509541 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02C03u 3',
mRNA sequence
Length = 534
Score = 158 bits (339), Expect(2) = 4e-044
Identities = 62/73 (84%), Positives = 69/73 (94%)
Frame = -3 / -3
Query: 538 PLDEPMIDVSSSQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLETTLTYQHKTYK 359
PL+EP+IDVS+ +FYGEGYDDSDKRIPDMT+INKQLGWNPKTPLKDLLETTLTYQHKTYK
Sbjct: 445 PLEEPVIDVSAKEFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKTYK 266
Query: 358 EAVKRQMSQASAS 320
EAVK QM A+A+
Sbjct: 265 EAVKTQMCLATAT 227
Score = 100 bits (213), Expect(2) = 8e-026
Identities = 44/67 (65%), Positives = 50/67 (74%)
Frame = +2 / +2
Query: 338 HLPFHSFFVCLVLIRQRCLQQILERRLWVPT*LLVDYSHVGDPLVAIIVSFAVELTRAHV 517
HL F VCLVL+ Q LQQ+LER L VP *LLVD HVGDPLVA++V FAVE RAHV
Sbjct: 245 HLCLDGFLVCLVLVGQSRLQQVLERGLGVPP*LLVDQGHVGDPLVAVVVPFAVEFFRAHV 424
Query: 518 NHGLIQR 538
+H L+QR
Sbjct: 425 DHRLLQR 445
Score = 41.4 bits (84), Expect(2) = 4e-044
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -3 / -2
Query: 595 VRELAQMMTEVYANVSGEAP 536
VRELA+MMTEVYA VSGE P
Sbjct: 503 VRELAEMMTEVYAKVSGEPP 444
Score = 37.7 bits (76), Expect(2) = 8e-026
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / +3
Query: 542 LS*DICVDLCHHLGQLPN 595
LS*D+ +DLCHH QLPN
Sbjct: 450 LS*DLSIDLCHHFSQLPN 503
>gb|BF620768.2|BF620768 HVSMEc0020M20f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0020M20f, mRNA sequence
Length = 678
Score = 174 bits (374), Expect = 1e-042
Identities = 71/88 (80%), Positives = 77/88 (87%)
Frame = -3 / +1
Query: 1462 DLDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLAVDVYCDKIRHLVDPAPPHLAG 1283
DLDG +V PLTICMIG GGFIGSHLCEKLMAET HVVLAVDVY DKIRHLV+P PPHLA
Sbjct: 142 DLDGGAVPPLTICMIGTGGFIGSHLCEKLMAETPHVVLAVDVYSDKIRHLVEPPPPHLAR 321
Query: 1282 RISFHRLNIKNDSRLEGLIKMADLTINL 1199
ISFH LNIKND RL+GL+KMADL ++L
Sbjct: 322 HISFHHLNIKNDPRLKGLVKMADLGLSL 405
Score = 141 bits (302), Expect = 1e-032
Identities = 62/81 (76%), Positives = 63/81 (77%)
Frame = +3 / -2
Query: 1212 RSAILMSPSSLESFLMLRRWKEMRPARCGGAGSTRWRILSQYTSTARTTWRVSAMSFSQR 1391
RSAIL P SFLMLR WKEM AR GG GSTRWRILS+ TSTARTTW VSAMSFSQR
Sbjct: 392 RSAILTRPLRRGSFLMLRWWKEMCLARWGGGGSTRWRILSE*TSTARTTWGVSAMSFSQR 213
Query: 1392 WEPMKPPAPIMQMVRGATELP 1454
WEPMKPP PIMQMV G T P
Sbjct: 212 WEPMKPPVPIMQMVSGGTAPP 150
Score = 136 bits (292), Expect = 3e-031
Identities = 60/82 (73%), Positives = 66/82 (80%)
Frame = +2 / -1
Query: 1211 QIGHLDEPLEPGVILDVKAVEGDAPREVRRRGVDEVADLIAVYVDGEDDMARLGHELLAE 1390
QIGHLDE LE GV+LDV+ VEGD EV RR + EVADL+ V VDGEDD+ LGHELLAE
Sbjct: 393 QIGHLDEALEAGVVLDVEVVEGDVSGEVGRRRLYEVADLVGVDVDGEDDVGGLGHELLAE 214
Query: 1391 VGADEAAGANHADGEGRDGVAV 1456
VGADEAAGA+HADGE R G AV
Sbjct: 213 VGADEAAGADHADGERRHGAAV 148
>gb|CB880201.1|CB880201 HM05M21w HM Hordeum vulgare subsp. vulgare cDNA clone HM05M21
3-PRIME, mRNA sequence
Length = 527
Score = 162 bits (349), Expect = 4e-039
Identities = 64/76 (84%), Positives = 71/76 (93%)
Frame = -3 / -1
Query: 547 GEAPLDEPMIDVSSSQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLETTLTYQHK 368
GE PL+EP+IDVS+ +FYGEGYDDSDKRIPDMT+INKQLGWNPKTPLKDLLETTLTYQHK
Sbjct: 527 GEPPLEEPVIDVSAKEFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHK 348
Query: 367 TYKEAVKRQMSQASAS 320
TYKEAVK QM A+A+
Sbjct: 347 TYKEAVKTQMCLATAT 300
Score = 102 bits (218), Expect = 5e-021
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = +2 / +3
Query: 338 HLPFHSFFVCLVLIRQRCLQQILERRLWVPT*LLVDYSHVGDPLVAIIVSFAVELTRAHV 517
HL F VCLVL+ Q LQQ+LER L VP *LLVD HVGDPLVA++V FAVE RAHV
Sbjct: 318 HLCLDGFLVCLVLVGQSRLQQVLERGLGVPP*LLVDQGHVGDPLVAVVVPFAVEFFRAHV 497
Query: 518 NHGLIQRCLS 547
+H L+QR LS
Sbjct: 498 DHRLLQRGLS 527
>gb|BJ468230.1|BJ468230 BJ468230 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37m02 3', mRNA sequence
Length = 608
Score = 137 bits (294), Expect = 2e-031
Identities = 54/61 (88%), Positives = 58/61 (95%)
Frame = -3 / -3
Query: 502 QFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKRQMSQASA 323
+FYGEGYDDSDKRIPDMT+INKQLGWNPKTPLKDLLETTLTYQHKTYKEAVK QM A+A
Sbjct: 606 EFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKTQMCLATA 427
Query: 322 S 320
+
Sbjct: 426 T 424
>gb|AJ433998.1|AJ433998 AJ433998 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200071E08F1, mRNA sequence
Length = 431
Score = 133 bits (286), Expect = 2e-030
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = -3 / +1
Query: 496 YGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKRQMSQASAS 320
YGEGYDDSDKRIPDMT+INKQLGWNPKTPLKDLLETTLTYQHKTYKEAVK QM A+A+
Sbjct: 1 YGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKTQMCLATAT 177
>gb|CV060478.1|CV060478 BNEL58f1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL58f1 5' similar to OJ1656_A11.18,
mRNA sequence
Length = 559
Score = 119 bits (255), Expect = 4e-026
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = -3 / -3
Query: 481 DDSDKRIPDMTIINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKRQMSQASAS 320
DDSDKRIPDMT+INKQLGWNPKTPLKDLLETTLTYQHKTYKEAVK QM A+A+
Sbjct: 389 DDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKTQMCLATAT 228
>gb|BQ660689.1|BQ660689 HI04P09u HI Hordeum vulgare subsp. vulgare cDNA clone HI04P09
3-PRIME, mRNA sequence
Length = 501
Score = 112 bits (239), Expect = 6e-024
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = -3 / -2
Query: 472 DKRIPDMTIINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKRQMSQASAS 320
DKRIPDMT+INKQLGWNPKTPLKDLLETTLTYQHKTYKEAVK QM A+A+
Sbjct: 500 DKRIPDMTLINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKTQMCLATAT 348
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 728,375,308
Number of Sequences: 312970
Number of extensions: 12327562
Number of successful extensions: 112698
Number of sequences better than 1.0e-020: 51
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 20448554907
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)