TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404820.2.1
(830 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF265457.3|BF265457 HV_CEa0012F07f Hordeum vulgare seedl... 287 7e-079
gb|AV926707.1|AV926707 AV926707 K. Sato unpublished cDNA li... 240 7e-063
gb|AV934689.1|AV934689 AV934689 K. Sato unpublished cDNA li... 231 1e-062
gb|AV936387.1|AV936387 AV936387 K. Sato unpublished cDNA li... 231 1e-062
gb|BJ473617.1|BJ473617 BJ473617 K. Sato unpublished cDNA li... 231 1e-062
gb|AV927733.1|AV927733 AV927733 K. Sato unpublished cDNA li... 231 1e-062
gb|BJ477252.1|BJ477252 BJ477252 K. Sato unpublished cDNA li... 231 2e-061
gb|BJ475011.1|BJ475011 BJ475011 K. Sato unpublished cDNA li... 231 4e-061
gb|BQ661605.1|BQ661605 HM04E05u HM Hordeum vulgare subsp. v... 231 5e-060
gb|BG418430.1|BG418430 HVSMEk0022K21f Hordeum vulgare testa... 230 1e-059
gb|BM377017.2|BM377017 EBem05_SQ003_O02_R embryo, 14 DPA, n... 229 2e-059
gb|BF627189.2|BF627189 HVSMEb0004D01f Hordeum vulgare seedl... 211 4e-054
gb|AV931607.1|AV931607 AV931607 K. Sato unpublished cDNA li... 208 3e-053
gb|AV926824.1|AV926824 AV926824 K. Sato unpublished cDNA li... 204 4e-052
gb|CA018258.1|CA018258 HV08B15r HV Hordeum vulgare subsp. v... 134 3e-051
gb|BU972175.1|BU972175 HB20N14r BC Hordeum vulgare subsp. v... 182 2e-045
gb|CD663693.1|CD663693 UCRHV18_06bd04_b1 Drought-stressed D... 172 2e-042
gb|AY177665.1| Hordeum vulgare subsp. vulgare putative call... 137 2e-040
gb|AV931608.1|AV931608 AV931608 K. Sato unpublished cDNA li... 165 4e-040
gb|BG418775.1|BG418775 HVSMEk0024G07f Hordeum vulgare testa... 135 4e-040
gb|AV931716.1|AV931716 AV931716 K. Sato unpublished cDNA li... 161 3e-039
gb|AV926708.1|AV926708 AV926708 K. Sato unpublished cDNA li... 149 3e-035
gb|CD663695.1|CD663695 UCRHV18_06bd07_b1 Drought-stressed D... 144 6e-034
gb|BM374568.2|BM374568 EBpi03_SQ003_P19_R pistil, 4 DPA, no... 142 3e-033
gb|BG415664.1|BG415664 HVSMEk0007G03f Hordeum vulgare testa... 137 1e-031
gb|BG417338.1|BG417338 HVSMEk0017J08f Hordeum vulgare testa... 137 1e-031
gb|AV837078.1|AV837078 AV837078 K. Sato unpublished cDNA li... 132 2e-030
gb|BU995906.1|BU995906 HM11L21r HM Hordeum vulgare subsp. v... 130 1e-029
gb|BJ474020.1|BJ474020 BJ474020 K. Sato unpublished cDNA li... 129 2e-029
gb|BJ474554.1|BJ474554 BJ474554 K. Sato unpublished cDNA li... 129 2e-029
gb|BJ476230.1|BJ476230 BJ476230 K. Sato unpublished cDNA li... 129 2e-029
gb|CD662722.1|CD662722 UCRHV18_02df07_b1 Drought-stressed D... 129 2e-029
gb|CB882058.1|CB882058 HM11L21w HM Hordeum vulgare subsp. v... 129 2e-029
gb|BJ469981.1|BJ469981 BJ469981 K. Sato unpublished cDNA li... 123 1e-027
gb|BJ472233.1|BJ472233 BJ472233 K. Sato unpublished cDNA li... 123 1e-027
gb|BJ473277.1|BJ473277 BJ473277 K. Sato unpublished cDNA li... 123 1e-027
gb|CD663772.1|CD663772 UCRHV18_06cd06_b1 Drought-stressed D... 122 3e-027
gb|BJ471422.1|BJ471422 BJ471422 K. Sato unpublished cDNA li... 115 4e-025
gb|CB876259.1|CB876259 HX10M03w HX Hordeum vulgare subsp. v... 114 8e-025
gb|BQ754043.1|BQ754043 EBca01_SQ002_K10_R carpel, pre-anthe... 105 4e-022
gb|CB883678.1|CB883678 HQ02P09w HQ Hordeum vulgare subsp. v... 105 4e-022
gb|CA027060.1|CA027060 HZ57M12r HZ Hordeum vulgare subsp. v... 102 3e-021
>gb|BF265457.3|BF265457 HV_CEa0012F07f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0012F07f, mRNA sequence
Length = 654
Score = 287 bits (622), Expect(2) = 7e-079
Identities = 127/189 (67%), Positives = 140/189 (74%)
Frame = +3 / -3
Query: 195 LNSILGWNSETNGNQARNAIGVNNSKPMMIS*PRASALTDPHSPICEIADLIVCAIRSKP 374
+ SI WNS+TNGN ARNAIGV +S PMMIS PRA A DPHSP IA A RS+P
Sbjct: 628 VKSIXVWNSDTNGNHARNAIGVKSSSPMMISYPRARARIDPHSPTLMIAGFSA*ATRSRP 449
Query: 375 HPVGMNARMQTKMS*TVMCGIAIKIMIIEINVMNISPLISRNTSWNSALNFLLPTDTVFI 554
HPVGM ARMQT MS VM GI I+I ++E+N M ISPL SRNTSWNSALNF PTDT FI
Sbjct: 448 HPVGMKARMQTNMSWIVMWGITIRITMVEMNTMKISPLSSRNTSWNSALNFRRPTDTAFI 269
Query: 555 TSKMTKIMTHEMX*TRTLFV*VVMFK**TRPYW*IKKRNESTISRTVPRFPECLRXSCSF 734
TS M K+ TH+ *TRTL V +VM + *T PYW*+KKR STISRTVPRFPE R SCSF
Sbjct: 268 TSNMKKMTTHDKQ*TRTLLVCLVMLRW*TSPYW*MKKRTASTISRTVPRFPEYFRGSCSF 89
Query: 735 SHHDXXLFS 761
SHHD LFS
Sbjct: 88 SHHDSQLFS 62
Score = 201 bits (433), Expect = 5e-051
Identities = 87/168 (51%), Positives = 118/168 (70%)
Frame = +2 / -2
Query: 200 QHPWLELRNKREPSEECDRGEQQQAHDDLIASGKRLDRSP*PHM*NS*PHSLCYQKQTPS 379
+H LELR++REP +E DRGE+QQ HDDL+ + DR P PH + L +++Q PS
Sbjct: 623 EHXSLELRHEREPRQERDRGEEQQPHDDLVPTS*SPDRPPQPHPHDRRLQCLSHEEQAPS 444
Query: 380 SWHERKDANKDVLNCHVWDCYQDYDNRDKRYEYQPLDQPEHKLELCTEFPPAN*YSLHHE 559
WHE KDA++ VL+ HV D +D+D D+ E QPL+QPEH+LEL EFPP + +SLHH+
Sbjct: 443 RWHEGKDADEYVLDRHVGDHDKDHDGGDEHDEDQPLEQPEHELELRAEFPPTDRHSLHHQ 264
Query: 560 QNDKDYDPRDAXNQNALRVSGDVQMINKTILVNKEAQRKHYFKNSATL 703
Q ++D +P A NQ+AL V G V+M+N+ ILV++EA KHY KN ATL
Sbjct: 263 QYEEDDNP*QAINQDALGVFGYVEMVNEPILVDEEAHGKHYLKNGATL 120
Score = 167 bits (359), Expect(4) = 1e-076
Identities = 65/81 (80%), Positives = 73/81 (90%)
Frame = -2 / +3
Query: 433 PHMTVQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTP 254
PHMT+QDIFVCILAFMPTGWGLLL+AQ ++ AI +GLWGS++ALARGYEIIMGLLLFTP
Sbjct: 390 PHMTIQDIFVCILAFMPTGWGLLLVAQALKPAIMRVGLWGSIRALARGYEIIMGLLLFTP 569
Query: 253 IAFLAWFPFVSEFQPRMLFNQ 191
IAFLAWFPFVSEFQ ML +
Sbjct: 570 IAFLAWFPFVSEFQTXMLLTR 632
Score = 141 bits (302), Expect(2) = 1e-044
Identities = 60/129 (46%), Positives = 80/129 (62%)
Frame = -1 / +2
Query: 584 VGHNLCHFARDEDCISWQEEIQCRVPACVPADQGADIHNVYLYYHNLDSNPTHDSSGHLC 405
+G +L H A DE C+ EIQ VPA VPA QGAD+H V+L++ + +P HD GH+
Sbjct: 239 MGCHLLHIAGDEGCVGRSAEIQRGVPARVPAAQGADLHRVHLHHRDPYRDPPHDDPGHIR 418
Query: 404 LHPCVHANWMGFASDSTNYEVSYFTYGAMGIGQGACPRL*DHHGLAVVHPDRIPRLVPVC 225
LHPC+HAN MG A + E GA+G+ G+ + DHHG A +HPDR+P +VPV
Sbjct: 419 LHPCLHANGMGPAPRGSGTEAGDHEGGAVGVDPGSSSWVRDHHGAAALHPDRVPGVVPVR 598
Query: 224 FGVPAKDAV 198
VP DA+
Sbjct: 599 V*VPDSDAL 625
Score = 106 bits (226), Expect(4) = 1e-076
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = -2 / +3
Query: 760 EKXXXSWWEKEQEXLRHSGKRGTVLEIVLSLRFFIYQYGLVYHLNITTHTKS 605
EK SWWEKE E L++SGKRGTVLEIVL++RFFIYQYGLVYHLNIT HTKS
Sbjct: 63 EKSWESWWEKEHEPLKYSGKRGTVLEIVLAVRFFIYQYGLVYHLNITKHTKS 218
Score = 68.0 bits (142), Expect(4) = 3e-025
Identities = 31/60 (51%), Positives = 38/60 (63%)
Frame = +1 / -1
Query: 580 PTRCXKPERSSCEW*CSNDKQDHTGK*RSATKALFQEQCHAFQNA*XXPALFPTMTXXFS 759
P KP RS C W C + K+ HTG+*RSA +AL QE+CHA ++ AL PTMT FS
Sbjct: 243 PMTSNKPGRSWCVWLC*DGKRAHTGR*RSARQALSQERCHASRSISGARALSPTMTPNFS 64
Score = 58.8 bits (122), Expect(2) = 1e-044
Identities = 31/58 (53%), Positives = 34/58 (58%)
Frame = -3 / +1
Query: 762 QRKXXSHGGKKSRXXLGILESVALFLK*CFRCASLFTSMVLFII*TSPLTRRAFWFXA 589
+RK SHGG+KS SVA FL+*C CAS TSM F I T P T RA WF A
Sbjct: 61 RRKVGSHGGRKSTSP*NTPGSVAPFLR*CLPCASSSTSMGSFTIST*PNTPRASWFIA 234
Score = 46.9 bits (96), Expect(4) = 1e-076
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -2 / +3
Query: 553 MKTVSVGRRKFSAEFQLVFRL 491
MK VSVGRRKFSAEFQLVFRL
Sbjct: 270 MKAVSVGRRKFSAEFQLVFRL 332
Score = 38.6 bits (78), Expect(4) = 3e-025
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +1 / -1
Query: 202 ASLAGTPKQTGTKRGMRSG*TTASP**SHSLGQAP*PIPIAP 327
AS +GT +TGT G RSG* A+P**S + P P AP
Sbjct: 621 ASESGTQTRTGTTPGTRSG*RAAAP**SRTHELEPGSTPTAP 496
Score = 35.0 bits (70), Expect(4) = 3e-025
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1 / -1
Query: 367 ANPIQLA*TQGCKQRCPELSCVG 435
A PI LA* QGC++ CP SC G
Sbjct: 456 AGPIPLA*RQGCRRICPGSSCGG 388
Score = 28.1 bits (55), Expect(4) = 3e-025
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / -1
Query: 460 R*TL*ISAP*SAGTQAGT 513
R*T * SAP*+AGT+AGT
Sbjct: 363 R*TR*RSAP*AAGTRAGT 310
Score = 26.7 bits (52), Expect(2) = 7e-079
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / -1
Query: 168 ICRPLLKAWLNS 203
ICRP LKAWL +
Sbjct: 654 ICRPRLKAWLRA 619
Score = 23.5 bits (45), Expect(4) = 1e-076
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / +2
Query: 196 NQAFSRGLQ 170
NQAFSRGLQ
Sbjct: 626 NQAFSRGLQ 652
>gb|AV926707.1|AV926707 AV926707 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23h13 5', mRNA sequence
Length = 495
Score = 240 bits (519), Expect = 7e-063
Identities = 108/162 (66%), Positives = 118/162 (72%)
Frame = +3 / -1
Query: 276 MMIS*PRASALTDPHSPICEIADLIVCAIRSKPHPVGMNARMQTKMS*TVMCGIAIKIMI 455
MMIS PRA A DPHSP IA A RS+PHPVGM ARMQT MS VM GI I+I +
Sbjct: 495 MMISYPRARARIDPHSPTLMIAGFSA*ATRSRPHPVGMKARMQTNMSWIVMWGITIRITM 316
Query: 456 IEINVMNISPLISRNTSWNSALNFLLPTDTVFITSKMTKIMTHEMX*TRTLFV*VVMFK* 635
+E+N M ISPL SRNTSWNSALNF PTDT FITS M K+ TH+ *TRTL V +VM +
Sbjct: 315 VEMNTMKISPLSSRNTSWNSALNFRRPTDTAFITSNMKKMTTHDKQ*TRTLLVCLVMLRW 136
Query: 636 *TRPYW*IKKRNESTISRTVPRFPECLRXSCSFSHHDXXLFS 761
*T PYW*+KKR STISRTVPRFPE R SCSFSHHD L S
Sbjct: 135 *TSPYW*MKKRTASTISRTVPRFPEYFRGSCSFSHHDSQLXS 10
Score = 161 bits (347), Expect = 3e-039
Identities = 71/142 (50%), Positives = 97/142 (68%)
Frame = +2 / -3
Query: 278 DDLIASGKRLDRSP*PHM*NS*PHSLCYQKQTPSSWHERKDANKDVLNCHVWDCYQDYDN 457
DDL+ + DR P PH + L +++Q PS WHE KDA++ VL+ HV D +D+D
Sbjct: 493 DDLVPTS*SPDRPPQPHPHDRRLQCLSHEEQAPSRWHEGKDADEYVLDRHVGDHDKDHDG 314
Query: 458 RDKRYEYQPLDQPEHKLELCTEFPPAN*YSLHHEQNDKDYDPRDAXNQNALRVSGDVQMI 637
D+ E QPL+QPEH+LEL EFPP + +SLHH+Q ++D +P A NQ+AL V G V+M+
Sbjct: 313 GDEHDEDQPLEQPEHELELRAEFPPTDRHSLHHQQYEEDDNP*QAINQDALGVFGYVEMV 134
Query: 638 NKTILVNKEAQRKHYFKNSATL 703
N+ ILV++EA KHY KN ATL
Sbjct: 133 NEPILVDEEAHGKHYLKNGATL 68
Score = 110 bits (234), Expect(3) = 3e-057
Identities = 41/52 (78%), Positives = 48/52 (92%)
Frame = -2 / +2
Query: 433 PHMTVQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEII 278
PHMT+QDIFVCILAFMPTGWGLLL+AQ ++ AI +GLWGS++ALARGYEII
Sbjct: 338 PHMTIQDIFVCILAFMPTGWGLLLVAQALKPAIMRVGLWGSIRALARGYEII 493
Score = 108 bits (230), Expect(2) = 6e-034
Identities = 46/103 (44%), Positives = 62/103 (60%)
Frame = -1 / +1
Query: 584 VGHNLCHFARDEDCISWQEEIQCRVPACVPADQGADIHNVYLYYHNLDSNPTHDSSGHLC 405
+G +L H A DE C+ EIQ VPA VPA QGAD+H V+L++ + +P HD GH+
Sbjct: 187 MGCHLLHIAGDEGCVGRSAEIQRGVPARVPAAQGADLHRVHLHHRDPYRDPPHDDPGHIR 366
Query: 404 LHPCVHANWMGFASDSTNYEVSYFTYGAMGIGQGACPRL*DHH 276
LHPC+HAN MG A + E GA+G+ G+ + DHH
Sbjct: 367 LHPCLHANGMGPAPRGSGTEAGDHEGGAVGVDPGSSSWVRDHH 495
Score = 104 bits (221), Expect(3) = 3e-057
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = -2 / +2
Query: 757 KXXXSWWEKEQEXLRHSGKRGTVLEIVLSLRFFIYQYGLVYHLNITTHTKS 605
K SWWEKE E L++SGKRGTVLEIVL++RFFIYQYGLVYHLNIT HTKS
Sbjct: 14 KSWESWWEKEHEPLKYSGKRGTVLEIVLAVRFFIYQYGLVYHLNITKHTKS 166
Score = 56.1 bits (116), Expect(2) = 6e-034
Identities = 30/56 (53%), Positives = 32/56 (57%)
Frame = -3 / +3
Query: 756 KXXSHGGKKSRXXLGILESVALFLK*CFRCASLFTSMVLFII*TSPLTRRAFWFXA 589
K SHGG+KS SVA FL+*C CAS TSM F I T P T RA WF A
Sbjct: 15 KVGSHGGRKSTSP*NTPGSVAPFLR*CLPCASSSTSMGSFTIST*PNTPRASWFIA 182
Score = 46.9 bits (96), Expect(3) = 3e-057
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -2 / +2
Query: 553 MKTVSVGRRKFSAEFQLVFRL 491
MK VSVGRRKFSAEFQLVFRL
Sbjct: 218 MKAVSVGRRKFSAEFQLVFRL 280
>gb|AV934689.1|AV934689 AV934689 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal1e06 3', mRNA sequence
Length = 678
Score = 231 bits (498), Expect(2) = 1e-062
Identities = 92/106 (86%), Positives = 101/106 (95%)
Frame = -2 / -1
Query: 433 PHMTVQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTP 254
PHMT+QDIFVCILAFMPTGWGLLL+AQ ++ AI +GLWGS++ALARGYEIIMGLLLFTP
Sbjct: 585 PHMTIQDIFVCILAFMPTGWGLLLVAQALKPAIMRVGLWGSIRALARGYEIIMGLLLFTP 406
Query: 253 IAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE 116
IAFLAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRAAR+K+
Sbjct: 405 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRAARSKD 268
Score = 226 bits (489), Expect = 9e-059
Identities = 99/152 (65%), Positives = 110/152 (72%)
Frame = +3 / +2
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 221 IYLTTSYDGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 400
Query: 249 AIGVNNSKPMMIS*PRASALTDPHSPICEIADLIVCAIRSKPHPVGMNARMQTKMS*TVM 428
AIGV +S PMMIS PRA A DPHSP IA A RS+PHPVGM ARMQT MS VM
Sbjct: 401 AIGVKSSSPMMISYPRARARIDPHSPTLMIAGFSA*ATRSRPHPVGMKARMQTNMSWIVM 580
Query: 429 CGIAIKIMIIEINVMNISPLISRNTSWNSALN 524
GI I+I ++E+N M ISPL SRNTSWNSALN
Sbjct: 581 WGITIRITMVEMNTMKISPLSSRNTSWNSALN 676
Score = 163 bits (351), Expect = 1e-039
Identities = 72/137 (52%), Positives = 94/137 (68%)
Frame = +2 / +1
Query: 116 LLVPCSPVFLVSA*DTRNLQTSTEGLVEQHPWLELRNKREPSEECDRGEQQQAHDDLIAS 295
+L P PV LV D R+LQT+ EGLVE+HP LELR++REP +E DRGE+QQ HDDL+ +
Sbjct: 268 VLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPT 447
Query: 296 GKRLDRSP*PHM*NS*PHSLCYQKQTPSSWHERKDANKDVLNCHVWDCYQDYDNRDKRYE 475
DR P PH + L +++Q PS WHE KDA++ VL+ HV D +D+D D+ E
Sbjct: 448 S*SPDRPPQPHPHDRRLQCLSHEEQAPSRWHEGKDADEYVLDRHVGDHDKDHDGGDEHDE 627
Query: 476 YQPLDQPEHKLELCTEF 526
QPL+QPEH+LEL EF
Sbjct: 628 DQPLEQPEHELELRAEF 678
Score = 153 bits (328), Expect = 1e-036
Identities = 68/136 (50%), Positives = 85/136 (62%)
Frame = -1 / -3
Query: 524 IQCRVPACVPADQGADIHNVYLYYHNLDSNPTHDSSGHLCLHPCVHANWMGFASDSTNYE 345
IQ VPA VPA QGAD+H V+L++ + +P HD GH+ LHPC+HAN MG A + E
Sbjct: 676 IQRGVPARVPAAQGADLHRVHLHHRDPYRDPPHDDPGHIRLHPCLHANGMGPAPRGSGTE 497
Query: 344 VSYFTYGAMGIGQGACPRL*DHHGLAVVHPDRIPRLVPVCFGVPAKDAVQPGLQ*RSADF 165
GA+G+ G+ + DHHG A +HPDR+P +VPV VP DA+QPGLQ SAD
Sbjct: 496 AGDHEGGAVGVDPGSSSWVRDHHGAAALHPDRVPGVVPVRV*VPDSDALQPGLQPWSADL 317
Query: 164 SYPRRTQERPGCTEQG 117
P QE PG EQG
Sbjct: 316 EDPGWAQEGPGGAEQG 269
Score = 29.5 bits (58), Expect(2) = 1e-062
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2 / -1
Query: 526 KFSAEFQLVFRL 491
KFSAEFQLVFRL
Sbjct: 678 KFSAEFQLVFRL 643
>gb|AV936387.1|AV936387 AV936387 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11c09 3', mRNA sequence
Length = 650
Score = 231 bits (498), Expect(2) = 1e-062
Identities = 92/106 (86%), Positives = 101/106 (95%)
Frame = -2 / -3
Query: 433 PHMTVQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTP 254
PHMT+QDIFVCILAFMPTGWGLLL+AQ ++ AI +GLWGS++ALARGYEIIMGLLLFTP
Sbjct: 555 PHMTIQDIFVCILAFMPTGWGLLLVAQALKPAIMRVGLWGSIRALARGYEIIMGLLLFTP 376
Query: 253 IAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE 116
IAFLAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRAAR+K+
Sbjct: 375 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRAARSKD 238
Score = 229 bits (495), Expect = 1e-059
Identities = 100/153 (65%), Positives = 111/153 (72%)
Frame = +3 / +2
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 191 IYLTTSYDGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 370
Query: 249 AIGVNNSKPMMIS*PRASALTDPHSPICEIADLIVCAIRSKPHPVGMNARMQTKMS*TVM 428
AIGV +S PMMIS PRA A DPHSP IA A RS+PHPVGM ARMQT MS VM
Sbjct: 371 AIGVKSSSPMMISYPRARARIDPHSPTLMIAGFSA*ATRSRPHPVGMKARMQTNMSWIVM 550
Query: 429 CGIAIKIMIIEINVMNISPLISRNTSWNSALNF 527
GI I+I ++E+N M ISPL SRNTSWNSALNF
Sbjct: 551 WGITIRITMVEMNTMKISPLSSRNTSWNSALNF 649
Score = 163 bits (351), Expect = 1e-039
Identities = 72/137 (52%), Positives = 94/137 (68%)
Frame = +2 / +1
Query: 116 LLVPCSPVFLVSA*DTRNLQTSTEGLVEQHPWLELRNKREPSEECDRGEQQQAHDDLIAS 295
+L P PV LV D R+LQT+ EGLVE+HP LELR++REP +E DRGE+QQ HDDL+ +
Sbjct: 238 VLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPT 417
Query: 296 GKRLDRSP*PHM*NS*PHSLCYQKQTPSSWHERKDANKDVLNCHVWDCYQDYDNRDKRYE 475
DR P PH + L +++Q PS WHE KDA++ VL+ HV D +D+D D+ E
Sbjct: 418 S*SPDRPPQPHPHDRRLQCLSHEEQAPSRWHEGKDADEYVLDRHVGDHDKDHDGGDEHDE 597
Query: 476 YQPLDQPEHKLELCTEF 526
QPL+QPEH+LEL EF
Sbjct: 598 DQPLEQPEHELELRAEF 648
Score = 155 bits (333), Expect = 3e-037
Identities = 69/137 (50%), Positives = 86/137 (62%)
Frame = -1 / -2
Query: 527 EIQCRVPACVPADQGADIHNVYLYYHNLDSNPTHDSSGHLCLHPCVHANWMGFASDSTNY 348
EIQ VPA VPA QGAD+H V+L++ + +P HD GH+ LHPC+HAN MG A +
Sbjct: 649 EIQRGVPARVPAAQGADLHRVHLHHRDPYRDPPHDDPGHIRLHPCLHANGMGPAPRGSGT 470
Query: 347 EVSYFTYGAMGIGQGACPRL*DHHGLAVVHPDRIPRLVPVCFGVPAKDAVQPGLQ*RSAD 168
E GA+G+ G+ + DHHG A +HPDR+P +VPV VP DA+QPGLQ SAD
Sbjct: 469 EAGDHEGGAVGVDPGSSSWVRDHHGAAALHPDRVPGVVPVRV*VPDSDALQPGLQPWSAD 290
Query: 167 FSYPRRTQERPGCTEQG 117
P QE PG EQG
Sbjct: 289 LEDPGWAQEGPGGAEQG 239
Score = 29.5 bits (58), Expect(2) = 1e-062
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2 / -3
Query: 526 KFSAEFQLVFRL 491
KFSAEFQLVFRL
Sbjct: 648 KFSAEFQLVFRL 613
>gb|BJ473617.1|BJ473617 BJ473617 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15l17 3', mRNA sequence
Length = 633
Score = 231 bits (498), Expect(2) = 1e-062
Identities = 92/106 (86%), Positives = 101/106 (95%)
Frame = -2 / -2
Query: 433 PHMTVQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTP 254
PHMT+QDIFVCILAFMPTGWGLLL+AQ ++ AI +GLWGS++ALARGYEIIMGLLLFTP
Sbjct: 539 PHMTIQDIFVCILAFMPTGWGLLLVAQALKPAIMRVGLWGSIRALARGYEIIMGLLLFTP 360
Query: 253 IAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE 116
IAFLAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRAAR+K+
Sbjct: 359 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRAARSKD 222
Score = 229 bits (495), Expect = 1e-059
Identities = 100/153 (65%), Positives = 111/153 (72%)
Frame = +3 / +1
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 175 IYLTTSYDGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 354
Query: 249 AIGVNNSKPMMIS*PRASALTDPHSPICEIADLIVCAIRSKPHPVGMNARMQTKMS*TVM 428
AIGV +S PMMIS PRA A DPHSP IA A RS+PHPVGM ARMQT MS VM
Sbjct: 355 AIGVKSSSPMMISYPRARARIDPHSPTLMIAGFSA*ATRSRPHPVGMKARMQTNMSWIVM 534
Query: 429 CGIAIKIMIIEINVMNISPLISRNTSWNSALNF 527
GI I+I ++E+N M ISPL SRNTSWNSALNF
Sbjct: 535 WGITIRITMVEMNTMKISPLSSRNTSWNSALNF 633
Score = 163 bits (351), Expect = 1e-039
Identities = 72/137 (52%), Positives = 94/137 (68%)
Frame = +2 / +3
Query: 116 LLVPCSPVFLVSA*DTRNLQTSTEGLVEQHPWLELRNKREPSEECDRGEQQQAHDDLIAS 295
+L P PV LV D R+LQT+ EGLVE+HP LELR++REP +E DRGE+QQ HDDL+ +
Sbjct: 222 VLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPT 401
Query: 296 GKRLDRSP*PHM*NS*PHSLCYQKQTPSSWHERKDANKDVLNCHVWDCYQDYDNRDKRYE 475
DR P PH + L +++Q PS WHE KDA++ VL+ HV D +D+D D+ E
Sbjct: 402 S*SPDRPPQPHPHDRRLQCLSHEEQAPSRWHEGKDADEYVLDRHVGDHDKDHDGGDEHDE 581
Query: 476 YQPLDQPEHKLELCTEF 526
QPL+QPEH+LEL EF
Sbjct: 582 DQPLEQPEHELELRAEF 632
Score = 155 bits (333), Expect = 3e-037
Identities = 69/137 (50%), Positives = 86/137 (62%)
Frame = -1 / -1
Query: 527 EIQCRVPACVPADQGADIHNVYLYYHNLDSNPTHDSSGHLCLHPCVHANWMGFASDSTNY 348
EIQ VPA VPA QGAD+H V+L++ + +P HD GH+ LHPC+HAN MG A +
Sbjct: 633 EIQRGVPARVPAAQGADLHRVHLHHRDPYRDPPHDDPGHIRLHPCLHANGMGPAPRGSGT 454
Query: 347 EVSYFTYGAMGIGQGACPRL*DHHGLAVVHPDRIPRLVPVCFGVPAKDAVQPGLQ*RSAD 168
E GA+G+ G+ + DHHG A +HPDR+P +VPV VP DA+QPGLQ SAD
Sbjct: 453 EAGDHEGGAVGVDPGSSSWVRDHHGAAALHPDRVPGVVPVRV*VPDSDALQPGLQPWSAD 274
Query: 167 FSYPRRTQERPGCTEQG 117
P QE PG EQG
Sbjct: 273 LEDPGWAQEGPGGAEQG 223
Score = 29.5 bits (58), Expect(2) = 1e-062
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2 / -2
Query: 526 KFSAEFQLVFRL 491
KFSAEFQLVFRL
Sbjct: 632 KFSAEFQLVFRL 597
>gb|AV927733.1|AV927733 AV927733 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd3g22 3', mRNA sequence
Length = 626
Score = 231 bits (498), Expect(2) = 1e-062
Identities = 92/106 (86%), Positives = 101/106 (95%)
Frame = -2 / -3
Query: 433 PHMTVQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTP 254
PHMT+QDIFVCILAFMPTGWGLLL+AQ ++ AI +GLWGS++ALARGYEIIMGLLLFTP
Sbjct: 531 PHMTIQDIFVCILAFMPTGWGLLLVAQALKPAIMRVGLWGSIRALARGYEIIMGLLLFTP 352
Query: 253 IAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE 116
IAFLAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRAAR+K+
Sbjct: 351 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRAARSKD 214
Score = 229 bits (495), Expect = 1e-059
Identities = 100/153 (65%), Positives = 111/153 (72%)
Frame = +3 / +2
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 167 IYLTTSYDGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 346
Query: 249 AIGVNNSKPMMIS*PRASALTDPHSPICEIADLIVCAIRSKPHPVGMNARMQTKMS*TVM 428
AIGV +S PMMIS PRA A DPHSP IA A RS+PHPVGM ARMQT MS VM
Sbjct: 347 AIGVKSSSPMMISYPRARARIDPHSPTLMIAGFSA*ATRSRPHPVGMKARMQTNMSWIVM 526
Query: 429 CGIAIKIMIIEINVMNISPLISRNTSWNSALNF 527
GI I+I ++E+N M ISPL SRNTSWNSALNF
Sbjct: 527 WGITIRITMVEMNTMKISPLSSRNTSWNSALNF 625
Score = 163 bits (351), Expect = 1e-039
Identities = 72/137 (52%), Positives = 94/137 (68%)
Frame = +2 / +1
Query: 116 LLVPCSPVFLVSA*DTRNLQTSTEGLVEQHPWLELRNKREPSEECDRGEQQQAHDDLIAS 295
+L P PV LV D R+LQT+ EGLVE+HP LELR++REP +E DRGE+QQ HDDL+ +
Sbjct: 214 VLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPT 393
Query: 296 GKRLDRSP*PHM*NS*PHSLCYQKQTPSSWHERKDANKDVLNCHVWDCYQDYDNRDKRYE 475
DR P PH + L +++Q PS WHE KDA++ VL+ HV D +D+D D+ E
Sbjct: 394 S*SPDRPPQPHPHDRRLQCLSHEEQAPSRWHEGKDADEYVLDRHVGDHDKDHDGGDEHDE 573
Query: 476 YQPLDQPEHKLELCTEF 526
QPL+QPEH+LEL EF
Sbjct: 574 DQPLEQPEHELELRAEF 624
Score = 155 bits (333), Expect = 3e-037
Identities = 69/137 (50%), Positives = 86/137 (62%)
Frame = -1 / -2
Query: 527 EIQCRVPACVPADQGADIHNVYLYYHNLDSNPTHDSSGHLCLHPCVHANWMGFASDSTNY 348
EIQ VPA VPA QGAD+H V+L++ + +P HD GH+ LHPC+HAN MG A +
Sbjct: 625 EIQRGVPARVPAAQGADLHRVHLHHRDPYRDPPHDDPGHIRLHPCLHANGMGPAPRGSGT 446
Query: 347 EVSYFTYGAMGIGQGACPRL*DHHGLAVVHPDRIPRLVPVCFGVPAKDAVQPGLQ*RSAD 168
E GA+G+ G+ + DHHG A +HPDR+P +VPV VP DA+QPGLQ SAD
Sbjct: 445 EAGDHEGGAVGVDPGSSSWVRDHHGAAALHPDRVPGVVPVRV*VPDSDALQPGLQPWSAD 266
Query: 167 FSYPRRTQERPGCTEQG 117
P QE PG EQG
Sbjct: 265 LEDPGWAQEGPGGAEQG 215
Score = 29.5 bits (58), Expect(2) = 1e-062
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2 / -3
Query: 526 KFSAEFQLVFRL 491
KFSAEFQLVFRL
Sbjct: 624 KFSAEFQLVFRL 589
>gb|BJ477252.1|BJ477252 BJ477252 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40n15 3', mRNA sequence
Length = 623
Score = 231 bits (498), Expect(2) = 2e-061
Identities = 92/106 (86%), Positives = 101/106 (95%)
Frame = -2 / -1
Query: 433 PHMTVQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTP 254
PHMT+QDIFVCILAFMPTGWGLLL+AQ ++ AI +GLWGS++ALARGYEIIMGLLLFTP
Sbjct: 533 PHMTIQDIFVCILAFMPTGWGLLLVAQALKPAIMRVGLWGSIRALARGYEIIMGLLLFTP 354
Query: 253 IAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE 116
IAFLAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRAAR+K+
Sbjct: 353 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRAARSKD 216
Score = 221 bits (477), Expect = 4e-057
Identities = 97/151 (64%), Positives = 108/151 (71%)
Frame = +3 / +1
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 169 IYLTTSYDGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 348
Query: 249 AIGVNNSKPMMIS*PRASALTDPHSPICEIADLIVCAIRSKPHPVGMNARMQTKMS*TVM 428
AIGV +S PMMIS PRA A DPHSP IA A RS+PHPVGM ARMQT MS VM
Sbjct: 349 AIGVKSSSPMMISYPRARARIDPHSPTLMIAGFSA*ATRSRPHPVGMKARMQTNMSWIVM 528
Query: 429 CGIAIKIMIIEINVMNISPLISRNTSWNSAL 521
GI I+I ++E+N M ISPL SRNTSWN AL
Sbjct: 529 WGITIRITMVEMNTMKISPLSSRNTSWNFAL 621
Score = 160 bits (345), Expect = 7e-039
Identities = 71/136 (52%), Positives = 93/136 (68%)
Frame = +2 / +3
Query: 116 LLVPCSPVFLVSA*DTRNLQTSTEGLVEQHPWLELRNKREPSEECDRGEQQQAHDDLIAS 295
+L P PV LV D R+LQT+ EGLVE+HP LELR++REP +E DRGE+QQ HDDL+ +
Sbjct: 216 VLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPT 395
Query: 296 GKRLDRSP*PHM*NS*PHSLCYQKQTPSSWHERKDANKDVLNCHVWDCYQDYDNRDKRYE 475
DR P PH + L +++Q PS WHE KDA++ VL+ HV D +D+D D+ E
Sbjct: 396 S*SPDRPPQPHPHDRRLQCLSHEEQAPSRWHEGKDADEYVLDRHVGDHDKDHDGGDEHDE 575
Query: 476 YQPLDQPEHKLELCTE 523
QPL+QPEH+LEL E
Sbjct: 576 DQPLEQPEHELELRAE 623
Score = 152 bits (326), Expect = 3e-036
Identities = 67/135 (49%), Positives = 84/135 (62%)
Frame = -1 / -3
Query: 521 QCRVPACVPADQGADIHNVYLYYHNLDSNPTHDSSGHLCLHPCVHANWMGFASDSTNYEV 342
Q VPA VPA QGAD+H V+L++ + +P HD GH+ LHPC+HAN MG A + E
Sbjct: 621 QREVPARVPAAQGADLHRVHLHHRDPYRDPPHDDPGHIRLHPCLHANGMGPAPRGSGTEA 442
Query: 341 SYFTYGAMGIGQGACPRL*DHHGLAVVHPDRIPRLVPVCFGVPAKDAVQPGLQ*RSADFS 162
GA+G+ G+ + DHHG A +HPDR+P +VPV VP DA+QPGLQ SAD
Sbjct: 441 GDHEGGAVGVDPGSSSWVRDHHGAAALHPDRVPGVVPVRV*VPDSDALQPGLQPWSADLE 262
Query: 161 YPRRTQERPGCTEQG 117
P QE PG EQG
Sbjct: 261 DPGWAQEGPGGAEQG 217
Score = 25.4 bits (49), Expect(2) = 2e-061
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -2 / -1
Query: 523 FSAEFQLVFRL 491
FSA+FQLVFRL
Sbjct: 623 FSAKFQLVFRL 591
>gb|BJ475011.1|BJ475011 BJ475011 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal27j14 3', mRNA sequence
Length = 623
Score = 231 bits (498), Expect(2) = 4e-061
Identities = 92/106 (86%), Positives = 101/106 (95%)
Frame = -2 / -1
Query: 433 PHMTVQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTP 254
PHMT+QDIFVCILAFMPTGWGLLL+AQ ++ AI +GLWGS++ALARGYEIIMGLLLFTP
Sbjct: 533 PHMTIQDIFVCILAFMPTGWGLLLVAQALKPAIMRVGLWGSIRALARGYEIIMGLLLFTP 354
Query: 253 IAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE 116
IAFLAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRAAR+K+
Sbjct: 353 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRAARSKD 216
Score = 222 bits (479), Expect = 2e-057
Identities = 97/151 (64%), Positives = 108/151 (71%)
Frame = +3 / +1
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 169 IYLTTSYDGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 348
Query: 249 AIGVNNSKPMMIS*PRASALTDPHSPICEIADLIVCAIRSKPHPVGMNARMQTKMS*TVM 428
AIGV +S PMMIS PRA A DPHSP IA A RS+PHPVGM ARMQT MS VM
Sbjct: 349 AIGVKSSSPMMISYPRARARIDPHSPTLMIAGFSA*ATRSRPHPVGMKARMQTNMSWIVM 528
Query: 429 CGIAIKIMIIEINVMNISPLISRNTSWNSAL 521
GI I+I ++E+N M ISPL SRNTSWN AL
Sbjct: 529 WGITIRITMVEMNTMKISPLSSRNTSWNXAL 621
Score = 160 bits (345), Expect = 7e-039
Identities = 71/136 (52%), Positives = 93/136 (68%)
Frame = +2 / +3
Query: 116 LLVPCSPVFLVSA*DTRNLQTSTEGLVEQHPWLELRNKREPSEECDRGEQQQAHDDLIAS 295
+L P PV LV D R+LQT+ EGLVE+HP LELR++REP +E DRGE+QQ HDDL+ +
Sbjct: 216 VLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPT 395
Query: 296 GKRLDRSP*PHM*NS*PHSLCYQKQTPSSWHERKDANKDVLNCHVWDCYQDYDNRDKRYE 475
DR P PH + L +++Q PS WHE KDA++ VL+ HV D +D+D D+ E
Sbjct: 396 S*SPDRPPQPHPHDRRLQCLSHEEQAPSRWHEGKDADEYVLDRHVGDHDKDHDGGDEHDE 575
Query: 476 YQPLDQPEHKLELCTE 523
QPL+QPEH+LEL E
Sbjct: 576 DQPLEQPEHELELRAE 623
Score = 151 bits (324), Expect = 5e-036
Identities = 66/132 (50%), Positives = 83/132 (62%)
Frame = -1 / -3
Query: 512 VPACVPADQGADIHNVYLYYHNLDSNPTHDSSGHLCLHPCVHANWMGFASDSTNYEVSYF 333
VPA VPA QGAD+H V+L++ + +P HD GH+ LHPC+HAN MG A + E
Sbjct: 612 VPARVPAAQGADLHRVHLHHRDPYRDPPHDDPGHIRLHPCLHANGMGPAPRGSGTEAGDH 433
Query: 332 TYGAMGIGQGACPRL*DHHGLAVVHPDRIPRLVPVCFGVPAKDAVQPGLQ*RSADFSYPR 153
GA+G+ G+ + DHHG A +HPDR+P +VPV VP DA+QPGLQ SAD P
Sbjct: 432 EGGAVGVDPGSSSWVRDHHGAAALHPDRVPGVVPVRV*VPDSDALQPGLQPWSADLEDPG 253
Query: 152 RTQERPGCTEQG 117
QE PG EQG
Sbjct: 252 WAQEGPGGAEQG 217
Score = 24.4 bits (47), Expect(2) = 4e-061
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 523 FSAEFQLVFRL 491
FSA FQLVFRL
Sbjct: 623 FSAXFQLVFRL 591
>gb|BQ661605.1|BQ661605 HM04E05u HM Hordeum vulgare subsp. vulgare cDNA clone HM04E05
3-PRIME, mRNA sequence
Length = 616
Score = 231 bits (498), Expect = 5e-060
Identities = 92/106 (86%), Positives = 101/106 (95%)
Frame = -2 / -1
Query: 433 PHMTVQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTP 254
PHMT+QDIFVCILAFMPTGWGLLL+AQ ++ AI +GLWGS++ALARGYEIIMGLLLFTP
Sbjct: 595 PHMTIQDIFVCILAFMPTGWGLLLVAQALKPAIMRVGLWGSIRALARGYEIIMGLLLFTP 416
Query: 253 IAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE 116
IAFLAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRAAR+K+
Sbjct: 415 IAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRAARSKD 278
Score = 182 bits (392), Expect = 2e-045
Identities = 81/127 (63%), Positives = 89/127 (70%)
Frame = +3 / +3
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 231 IYLTTSYYGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 410
Query: 249 AIGVNNSKPMMIS*PRASALTDPHSPICEIADLIVCAIRSKPHPVGMNARMQTKMS*TVM 428
AIGV +S PMMIS PRA A DPHSP IA A RS+PHPVGM ARMQT MS VM
Sbjct: 411 AIGVKSSSPMMISYPRARARIDPHSPTLMIAGFSA*ATRSRPHPVGMKARMQTNMSWIVM 590
Query: 429 CGIAIKI 449
GI I+I
Sbjct: 591 WGITIRI 611
Score = 132 bits (282), Expect = 3e-030
Identities = 58/113 (51%), Positives = 77/113 (68%)
Frame = +2 / +2
Query: 116 LLVPCSPVFLVSA*DTRNLQTSTEGLVEQHPWLELRNKREPSEECDRGEQQQAHDDLIAS 295
+L P PV LV D R+LQT+ EGLVE+HP LELR++REP +E DRGE+QQ HDDL+ +
Sbjct: 278 VLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPT 457
Query: 296 GKRLDRSP*PHM*NS*PHSLCYQKQTPSSWHERKDANKDVLNCHVWDCYQDYD 454
DR P PH + L +++Q PS WHE KDA++ VL+ HV D +D+D
Sbjct: 458 S*SPDRPPQPHPHDRRLQCLSHEEQAPSRWHEGKDADEYVLDRHVGDHDKDHD 616
Score = 122 bits (260), Expect = 3e-027
Identities = 53/107 (49%), Positives = 65/107 (60%)
Frame = -1 / -3
Query: 437 NPTHDSSGHLCLHPCVHANWMGFASDSTNYEVSYFTYGAMGIGQGACPRL*DHHGLAVVH 258
+P HD GH+ LHPC+HAN MG A + E GA+G+ G+ + DHHG A +H
Sbjct: 599 DPPHDDPGHIRLHPCLHANGMGPAPRGSGTEAGDHEGGAVGVDPGSSSWVRDHHGAAALH 420
Query: 257 PDRIPRLVPVCFGVPAKDAVQPGLQ*RSADFSYPRRTQERPGCTEQG 117
PDR+P +VPV VP DA+QPGLQ SAD P QE PG EQG
Sbjct: 419 PDRVPGVVPVRV*VPDSDALQPGLQPWSADLEDPGWAQEGPGGAEQG 279
>gb|BG418430.1|BG418430 HVSMEk0022K21f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0022K21f, mRNA sequence
Length = 507
Score = 230 bits (496), Expect = 1e-059
Identities = 101/150 (67%), Positives = 111/150 (74%)
Frame = +3 / -1
Query: 312 DPHSPICEIADLIVCAIRSKPHPVGMNARMQTKMS*TVMCGIAIKIMIIEINVMNISPLI 491
DPHSP IA A RS+PHPVGM ARMQT MS VM GI I+I ++E+N M ISPL
Sbjct: 504 DPHSPTLMIAGFSA*ATRSRPHPVGMKARMQTNMSWIVMWGITIRITMVEMNTMKISPLS 325
Query: 492 SRNTSWNSALNFLLPTDTVFITSKMTKIMTHEMX*TRTLFV*VVMFK**TRPYW*IKKRN 671
SRNTSWNSALNF PTDT FITS M K+ TH+ *TRTL V +VM + *T PYW*+KKR
Sbjct: 324 SRNTSWNSALNFRRPTDTAFITSNMKKMTTHDKQ*TRTLLVCLVMLRW*TSPYW*MKKRT 145
Query: 672 ESTISRTVPRFPECLRXSCSFSHHDXXLFS 761
STISRTVPRFPE R SCSFSHHD LFS
Sbjct: 144 ASTISRTVPRFPEYFRGSCSFSHHDSQLFS 55
Score = 154 bits (330), Expect = 8e-037
Identities = 67/131 (51%), Positives = 91/131 (69%)
Frame = +2 / -3
Query: 311 RSP*PHM*NS*PHSLCYQKQTPSSWHERKDANKDVLNCHVWDCYQDYDNRDKRYEYQPLD 490
R P PH + L +++Q PS WHE KDA++ VL+ HV D +D+D D+ E QPL+
Sbjct: 505 RPPQPHPHDRRLQCLSHEEQAPSRWHEGKDADEYVLDRHVGDHDKDHDGGDEHDEDQPLE 326
Query: 491 QPEHKLELCTEFPPAN*YSLHHEQNDKDYDPRDAXNQNALRVSGDVQMINKTILVNKEAQ 670
QPEH+LEL EFPP + +SLHH+Q ++D +P A NQ+AL V G V+M+N+ ILV++EA
Sbjct: 325 QPEHELELRAEFPPTDRHSLHHQQYEEDDNP*QAINQDALGVFGYVEMVNEPILVDEEAH 146
Query: 671 RKHYFKNSATL 703
KHY KN ATL
Sbjct: 145 GKHYLKNGATL 113
Score = 106 bits (226), Expect(3) = 2e-051
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = -2 / +2
Query: 760 EKXXXSWWEKEQEXLRHSGKRGTVLEIVLSLRFFIYQYGLVYHLNITTHTKS 605
EK SWWEKE E L++SGKRGTVLEIVL++RFFIYQYGLVYHLNIT HTKS
Sbjct: 56 EKSWESWWEKEHEPLKYSGKRGTVLEIVLAVRFFIYQYGLVYHLNITKHTKS 211
Score = 99.6 bits (211), Expect(2) = 4e-032
Identities = 42/91 (46%), Positives = 56/91 (61%)
Frame = -1 / +1
Query: 584 VGHNLCHFARDEDCISWQEEIQCRVPACVPADQGADIHNVYLYYHNLDSNPTHDSSGHLC 405
+G +L H A DE C+ EIQ VPA VPA QGAD+H V+L++ + +P HD GH+
Sbjct: 232 MGCHLLHIAGDEGCVGRSAEIQRGVPARVPAAQGADLHRVHLHHRDPYRDPPHDDPGHIR 411
Query: 404 LHPCVHANWMGFASDSTNYEVSYFTYGAMGI 312
LHPC+HAN MG A + E GA+G+
Sbjct: 412 LHPCLHANGMGPAPRGSGTEAGDHEGGAVGV 504
Score = 88.1 bits (186), Expect(3) = 2e-051
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = -2 / +2
Query: 433 PHMTVQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGS 311
PHMT+QDIFVCILAFMPTGWGLLL+AQ ++ AI +GLWGS
Sbjct: 383 PHMTIQDIFVCILAFMPTGWGLLLVAQALKPAIMRVGLWGS 505
Score = 58.8 bits (122), Expect(2) = 4e-032
Identities = 31/58 (53%), Positives = 34/58 (58%)
Frame = -3 / +3
Query: 762 QRKXXSHGGKKSRXXLGILESVALFLK*CFRCASLFTSMVLFII*TSPLTRRAFWFXA 589
+RK SHGG+KS SVA FL+*C CAS TSM F I T P T RA WF A
Sbjct: 54 RRKVGSHGGRKSTSP*NTPGSVAPFLR*CLPCASSSTSMGSFTIST*PNTPRASWFIA 227
Score = 46.9 bits (96), Expect(3) = 2e-051
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -2 / +2
Query: 553 MKTVSVGRRKFSAEFQLVFRL 491
MK VSVGRRKFSAEFQLVFRL
Sbjct: 263 MKAVSVGRRKFSAEFQLVFRL 325
>gb|BM377017.2|BM377017 EBem05_SQ003_O02_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_O02 5', mRNA sequence
Length = 466
Score = 229 bits (494), Expect = 2e-059
Identities = 102/153 (66%), Positives = 112/153 (73%)
Frame = +3 / -3
Query: 168 ICRPLLKAWLNSILGWNSETNGNQARNAIGVNNSKPMMIS*PRASALTDPHSPICEIADL 347
ICRP LKAWL SI WNS+TNGN ARNAIGV +S PMMI PRA A DPHSP IA
Sbjct: 464 ICRPRLKAWLKSIRVWNSDTNGNHARNAIGVKSSSPMMIWYPRARARIDPHSPTFMIAGF 285
Query: 348 IVCAIRSKPHPVGMNARMQTKMS*TVMCGIAIKIMIIEINVMNISPLISRNTSWNSALNF 527
A RS+PHPVGM ARMQT MS VM GI I+I ++E+N M ISPL SRNTSWNSALNF
Sbjct: 284 SA*ATRSRPHPVGMKARMQTNMSWIVMWGITIRITMVEMNTMKISPLSSRNTSWNSALNF 105
Query: 528 LLPTDTVFITSKMTKIMTHEMX*TRTLFV*VVM 626
PTDT FITS M K+ TH+ *TRTL V +VM
Sbjct: 104 RRPTDTAFITSNMKKMTTHDKQ*TRTLLVCLVM 6
Score = 193 bits (415), Expect(2) = 2e-056
Identities = 76/89 (85%), Positives = 84/89 (94%)
Frame = -2 / +1
Query: 433 PHMTVQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTP 254
PHMT+QDIFVCILAFMPTGWGLLL+AQ ++ AI +GLWGS++ALARGY+IIMGLLLFTP
Sbjct: 199 PHMTIQDIFVCILAFMPTGWGLLLVAQALKPAIMKVGLWGSIRALARGYQIIMGLLLFTP 378
Query: 253 IAFLAWFPFVSEFQPRMLFNQAFSRGLQI 167
IAFLAWFPFVSEFQ RMLFNQAFSRGLQI
Sbjct: 379 IAFLAWFPFVSEFQTRMLFNQAFSRGLQI 465
Score = 191 bits (412), Expect = 4e-048
Identities = 82/155 (52%), Positives = 111/155 (71%)
Frame = +2 / -2
Query: 167 NLQTSTEGLVEQHPWLELRNKREPSEECDRGEQQQAHDDLIASGKRLDRSP*PHM*NS*P 346
+LQT+ EGLVE+HP LELR++REP +E DRGE+QQ HDDL+ + DR P PH+ +
Sbjct: 465 DLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPTS*SPDRPPQPHLHDRRL 286
Query: 347 HSLCYQKQTPSSWHERKDANKDVLNCHVWDCYQDYDNRDKRYEYQPLDQPEHKLELCTEF 526
L +++Q PS WHE KDA++ VL+ HV D +D+D D+ E QPL+QPEH+LEL EF
Sbjct: 285 QCLSHEEQAPSRWHEGKDADEYVLDRHVGDHDKDHDGGDEHDEDQPLEQPEHELELRAEF 106
Query: 527 PPAN*YSLHHEQNDKDYDPRDAXNQNALRVSGDVQ 631
PP N +SLHH+Q ++D +P A NQ+AL V G V+
Sbjct: 105 PPTNRHSLHHQQYEEDDNP*QAINQDALGVFGYVE 1
Score = 160 bits (345), Expect = 7e-039
Identities = 68/139 (48%), Positives = 89/139 (64%)
Frame = -1 / +3
Query: 584 VGHNLCHFARDEDCISWQEEIQCRVPACVPADQGADIHNVYLYYHNLDSNPTHDSSGHLC 405
+G +L H A DE C+ W EIQ VPA VPA QGAD+H V+L++ + +P HD GH+
Sbjct: 48 MGCHLLHIAGDEGCVGWSAEIQRGVPARVPAAQGADLHRVHLHHRDPYRDPPHDDPGHIR 227
Query: 404 LHPCVHANWMGFASDSTNYEVSYFTYGAMGIGQGACPRL*DHHGLAVVHPDRIPRLVPVC 225
LHPC+HAN MG A ++ E GA+G+ G+ + DHHG A +HPDR+P +VPV
Sbjct: 228 LHPCLHANGMGPAPRGSSTEAGDHEGGAVGVDPGSSSWVPDHHGAAALHPDRVPGVVPVR 407
Query: 224 FGVPAKDAVQPGLQ*RSAD 168
VP DA+QP LQ SAD
Sbjct: 408 V*VPDSDALQPSLQPWSAD 464
Score = 46.9 bits (96), Expect(2) = 2e-056
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -2 / +1
Query: 553 MKTVSVGRRKFSAEFQLVFRL 491
MK VSVGRRKFSAEFQLVFRL
Sbjct: 79 MKAVSVGRRKFSAEFQLVFRL 141
>gb|BF627189.2|BF627189 HVSMEb0004D01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004D01f, mRNA sequence
Length = 765
Score = 211 bits (455), Expect = 4e-054
Identities = 91/133 (68%), Positives = 102/133 (76%)
Frame = +3 / -2
Query: 363 RSKPHPVGMNARMQTKMS*TVMCGIAIKIMIIEINVMNISPLISRNTSWNSALNFLLPTD 542
RS+PHPVGM AR+ T MS VM GI I+I ++E+N M ISPL SRNTSWNSALNF PTD
Sbjct: 578 RSRPHPVGMKARIHTNMSWIVMWGITIRITMVEMNTMKISPLSSRNTSWNSALNFRRPTD 399
Query: 543 TVFITSKMTKIMTHEMX*TRTLFV*VVMFK**TRPYW*IKKRNESTISRTVPRFPECLRX 722
T FITS M K+ TH+ *TRTL V +VM + *T PYW*+KKR STISRTVPRFPE R
Sbjct: 398 TAFITSNMKKMTTHDKQ*TRTLLVCLVMLRW*TSPYW*MKKRTASTISRTVPRFPEYFRG 219
Query: 723 SCSFSHHDXXLFS 761
SCSFSHHD LFS
Sbjct: 218 SCSFSHHDSQLFS 180
Score = 146 bits (314), Expect = 1e-034
Identities = 61/115 (53%), Positives = 84/115 (73%)
Frame = +2 / -1
Query: 359 YQKQTPSSWHERKDANKDVLNCHVWDCYQDYDNRDKRYEYQPLDQPEHKLELCTEFPPAN 538
+++Q PS WHE KD ++ VL+ HV D +D+D D+ E QPL+QPEH+LEL EFPP +
Sbjct: 582 HEEQAPSRWHEGKDPHEYVLDRHVGDHDKDHDGGDEHDEDQPLEQPEHELELRAEFPPTD 403
Query: 539 *YSLHHEQNDKDYDPRDAXNQNALRVSGDVQMINKTILVNKEAQRKHYFKNSATL 703
+SLHH+Q ++D +P A NQ+AL V G V+M+N+ ILV++EA KHY KN ATL
Sbjct: 402 RHSLHHQQYEEDDNP*QAINQDALGVFGYVEMVNEPILVDEEAHGKHYLKNGATL 238
Score = 106 bits (226), Expect(2) = 6e-043
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = -2 / +1
Query: 760 EKXXXSWWEKEQEXLRHSGKRGTVLEIVLSLRFFIYQYGLVYHLNITTHTKS 605
EK SWWEKE E L++SGKRGTVLEIVL++RFFIYQYGLVYHLNIT HTKS
Sbjct: 181 EKSWESWWEKEHEPLKYSGKRGTVLEIVLAVRFFIYQYGLVYHLNITKHTKS 336
Score = 88.1 bits (186), Expect(2) = 6e-043
Identities = 35/71 (49%), Positives = 47/71 (66%)
Frame = -1 / +3
Query: 584 VGHNLCHFARDEDCISWQEEIQCRVPACVPADQGADIHNVYLYYHNLDSNPTHDSSGHLC 405
+G +L H A DE C+ EIQ VPA VPA QGAD+H V+L++ + +P HD GH+
Sbjct: 357 MGCHLLHIAGDEGCVGRSAEIQRGVPARVPAAQGADLHRVHLHHRDPYRDPPHDDPGHIR 536
Query: 404 LHPCVHANWMG 372
+ PC+HAN MG
Sbjct: 537 VDPCLHANGMG 569
Score = 62.9 bits (131), Expect(3) = 6e-030
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = -2 / +1
Query: 433 PHMTVQDIFVCILAFMPTGWGLLLIAQTMRSAI 335
PHMT+QDIFV ILAFMPTGWGLLL+ + AI
Sbjct: 508 PHMTIQDIFVWILAFMPTGWGLLLVGSGLEPAI 606
Score = 58.8 bits (122), Expect(3) = 6e-030
Identities = 31/58 (53%), Positives = 34/58 (58%)
Frame = -3 / +2
Query: 762 QRKXXSHGGKKSRXXLGILESVALFLK*CFRCASLFTSMVLFII*TSPLTRRAFWFXA 589
+RK SHGG+KS SVA FL+*C CAS TSM F I T P T RA WF A
Sbjct: 179 RRKVGSHGGRKSTSP*NTPGSVAPFLR*CLPCASSSTSMGSFTIST*PNTPRASWFIA 352
Score = 46.9 bits (96), Expect(3) = 6e-030
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -2 / +1
Query: 553 MKTVSVGRRKFSAEFQLVFRL 491
MK VSVGRRKFSAEFQLVFRL
Sbjct: 388 MKAVSVGRRKFSAEFQLVFRL 450
>gb|AV931607.1|AV931607 AV931607 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23h13 3', mRNA sequence
Length = 508
Score = 208 bits (449), Expect = 3e-053
Identities = 84/97 (86%), Positives = 92/97 (94%)
Frame = -2 / -2
Query: 406 VCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTPIAFLAWFPF 227
VCILAFMPTGWGLLL+AQ ++ AI +GLWGS++ALARGYEIIMGLLLFTPIAFLAWFPF
Sbjct: 507 VCILAFMPTGWGLLLVAQALKPAIMRVGLWGSIRALARGYEIIMGLLLFTPIAFLAWFPF 328
Query: 226 VSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE 116
VSEFQ RMLFNQAFSRGLQISRILGGHKKDRAAR+K+
Sbjct: 327 VSEFQTRMLFNQAFSRGLQISRILGGHKKDRAARSKD 217
Score = 168 bits (362), Expect = 3e-041
Identities = 73/113 (64%), Positives = 80/113 (70%)
Frame = +3 / +2
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 170 IYLTTSYDGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 349
Query: 249 AIGVNNSKPMMIS*PRASALTDPHSPICEIADLIVCAIRSKPHPVGMNARMQT 407
AIGV +S PMMIS PRA A DPHSP IA A RS+PHPVGM ARMQT
Sbjct: 350 AIGVKSSSPMMISYPRARARIDPHSPTLMIAGFSA*ATRSRPHPVGMKARMQT 508
Score = 118 bits (253), Expect(2) = 2e-026
Identities = 51/97 (52%), Positives = 66/97 (68%)
Frame = +2 / +1
Query: 116 LLVPCSPVFLVSA*DTRNLQTSTEGLVEQHPWLELRNKREPSEECDRGEQQQAHDDLIAS 295
+L P PV LV D R+LQT+ EGLVE+HP LELR++REP +E DRGE+QQ HDDL+ +
Sbjct: 217 VLAPRRPVLLVPTQDPRDLQTTAEGLVEEHPSLELRHEREPRQERDRGEEQQPHDDLVPT 396
Query: 296 GKRLDRSP*PHM*NS*PHSLCYQKQTPSSWHERKDAN 406
DR P PH + L +++Q PS WHE KDA+
Sbjct: 397 S*SPDRPPQPHPHDRRLQCLSHEEQAPSRWHEGKDAD 507
Score = 106 bits (227), Expect = 1e-022
Identities = 48/96 (50%), Positives = 58/96 (60%)
Frame = -1 / -1
Query: 404 LHPCVHANWMGFASDSTNYEVSYFTYGAMGIGQGACPRL*DHHGLAVVHPDRIPRLVPVC 225
LHPC+HAN MG A + E GA+G+ G+ + DHHG A +HPDR+P +VPV
Sbjct: 505 LHPCLHANGMGPAPRGSGTEAGDHEGGAVGVDPGSSSWVRDHHGAAALHPDRVPGVVPVR 326
Query: 224 FGVPAKDAVQPGLQ*RSADFSYPRRTQERPGCTEQG 117
VP DA+QPGLQ SAD P QE PG EQG
Sbjct: 325 V*VPDSDALQPGLQPWSADLEDPGWAQEGPGGAEQG 218
Score = 21.7 bits (41), Expect(2) = 2e-026
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 7 CNIQPGIIT 33
CN+QPGI T
Sbjct: 86 CNLQPGIHT 112
>gb|AV926824.1|AV926824 AV926824 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23o13 5', mRNA sequence
Length = 413
Score = 204 bits (441), Expect = 4e-052
Identities = 91/135 (67%), Positives = 101/135 (74%)
Frame = +3 / -2
Query: 336 IADLIVCAIRSKPHPVGMNARMQTKMS*TVMCGIAIKIMIIEINVMNISPLISRNTSWNS 515
IA A RS+PHPVGM ARMQT MS VM GI I+I ++E+N M ISPL SRNTSWNS
Sbjct: 406 IAGFSA*ATRSRPHPVGMKARMQTNMSWIVMWGITIRITMVEMNTMKISPLSSRNTSWNS 227
Query: 516 ALNFLLPTDTVFITSKMTKIMTHEMX*TRTLFV*VVMFK**TRPYW*IKKRNESTISRTV 695
ALNF PTDT FITS M K+ TH+ *TRTL V +VM + *T PYW*+KKR STISRTV
Sbjct: 226 ALNFRRPTDTAFITSNMKKMTTHDKQ*TRTLLVCLVMLRW*TSPYW*MKKRTASTISRTV 47
Query: 696 PRFPECLRXSCSFSH 740
PRFPE R SCSFSH
Sbjct: 46 PRFPEYFRGSCSFSH 2
Score = 150 bits (322), Expect = 1e-035
Identities = 63/117 (53%), Positives = 86/117 (73%)
Frame = +2 / -1
Query: 353 LCYQKQTPSSWHERKDANKDVLNCHVWDCYQDYDNRDKRYEYQPLDQPEHKLELCTEFPP 532
L +++Q PS WHE KDA++ VL+ HV D +D+D D+ E QPL+QPEH+LEL EFPP
Sbjct: 389 LSHEEQAPSRWHEGKDADEYVLDRHVGDHDKDHDGGDEHDEDQPLEQPEHELELRAEFPP 210
Query: 533 AN*YSLHHEQNDKDYDPRDAXNQNALRVSGDVQMINKTILVNKEAQRKHYFKNSATL 703
+ +SLHH+Q ++D +P A NQ+AL V G V+M+N+ ILV++EA KHY KN ATL
Sbjct: 209 TDRHSLHHQQYEEDDNP*QAINQDALGVFGYVEMVNEPILVDEEAHGKHYLKNGATL 39
Score = 96.4 bits (204), Expect(3) = 3e-044
Identities = 38/45 (84%), Positives = 42/45 (93%)
Frame = -2 / +3
Query: 739 WEKEQEXLRHSGKRGTVLEIVLSLRFFIYQYGLVYHLNITTHTKS 605
WEKE E L++SGKRGTVLEIVL++RFFIYQYGLVYHLNIT HTKS
Sbjct: 3 WEKEHEPLKYSGKRGTVLEIVLAVRFFIYQYGLVYHLNITKHTKS 137
Score = 94.1 bits (199), Expect(2) = 1e-027
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = -1 / +2
Query: 584 VGHNLCHFARDEDCISWQEEIQCRVPACVPADQGADIHNVYLYYHNLDSNPTHDSSGHLC 405
+G +L H A DE C+ EIQ VPA VPA QGAD+H V+L++ + +P HD GH+
Sbjct: 158 MGCHLLHIAGDEGCVGRSAEIQRGVPARVPAAQGADLHRVHLHHRDPYRDPPHDDPGHIR 337
Query: 404 LHPCVHANWMGFASDSTNYE 345
LHPC+HAN MG A + E
Sbjct: 338 LHPCLHANGMGPAPRGSGTE 397
Score = 73.9 bits (155), Expect(3) = 3e-044
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = -2 / +3
Query: 433 PHMTVQDIFVCILAFMPTGWGLLLIAQTMRSAI 335
PHMT+QDIFVCILAFMPTGWGLLL+AQ ++ AI
Sbjct: 309 PHMTIQDIFVCILAFMPTGWGLLLVAQALKPAI 407
Score = 49.2 bits (101), Expect(2) = 1e-027
Identities = 27/51 (52%), Positives = 29/51 (56%)
Frame = -3 / +1
Query: 741 GGKKSRXXLGILESVALFLK*CFRCASLFTSMVLFII*TSPLTRRAFWFXA 589
GG+KS SVA FL+*C CAS TSM F I T P T RA WF A
Sbjct: 1 GGRKSTSP*NTPGSVAPFLR*CLPCASSSTSMGSFTIST*PNTPRASWFIA 153
Score = 46.9 bits (96), Expect(3) = 3e-044
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -2 / +3
Query: 553 MKTVSVGRRKFSAEFQLVFRL 491
MK VSVGRRKFSAEFQLVFRL
Sbjct: 189 MKAVSVGRRKFSAEFQLVFRL 251
>gb|CA018258.1|CA018258 HV08B15r HV Hordeum vulgare subsp. vulgare cDNA clone HV08B15
5-PRIME, mRNA sequence
Length = 654
Score = 134 bits (288), Expect(3) = 3e-051
Identities = 60/79 (75%), Positives = 67/79 (84%)
Frame = +3 / -1
Query: 378 PVGMNARMQTKMS*TVMCGIAIKIMIIEINVMNISPLISRNTSWNSALNFLLPTDTVFIT 557
PVGM ARMQTKMS TVM IA+KI+ +E+NVMNISPLISR TSWNSALN LLPTDTVFIT
Sbjct: 654 PVGMKARMQTKMSRTVM*AIAVKIIRMEMNVMNISPLISRKTSWNSALNLLLPTDTVFIT 475
Query: 558 SKMTKIMTHEMX*TRTLFV 614
S MT+I THE *T TL++
Sbjct: 474 SSMTRITTHEKP*TSTLWL 418
Score = 106 bits (226), Expect(2) = 2e-033
Identities = 43/77 (55%), Positives = 61/77 (79%)
Frame = +2 / -3
Query: 380 SWHERKDANKDVLNCHVWDCYQDYDNRDKRYEYQPLDQPEHKLELCTEFPPAN*YSLHHE 559
S HE +DA+KDV +CHV DC DY + D+ YEY+PLDQPE +LEL E PPA+*+ LH++
Sbjct: 652 SRHESEDADKDVEDCHVSDCC*DYKDGDECYEYKPLDQPEDELELRAEPPPAD*HGLHNK 473
Query: 560 QNDKDYDPRDAXNQNAL 610
Q+D++++P +A NQ+AL
Sbjct: 472 QHDQNHNP*EAVNQHAL 422
Score = 98.2 bits (208), Expect(2) = 3e-042
Identities = 38/47 (80%), Positives = 42/47 (89%)
Frame = -2 / +2
Query: 760 EKXXXSWWEKEQEXLRHSGKRGTVLEIVLSLRFFIYQYGLVYHLNIT 620
EK SWW+KEQ LRHSGKRGT+LEI+L+LRFFIYQYGLVYHLNIT
Sbjct: 269 EKSWESWWDKEQGPLRHSGKRGTILEILLALRFFIYQYGLVYHLNIT 409
Score = 94.1 bits (199), Expect(2) = 3e-042
Identities = 38/63 (60%), Positives = 48/63 (76%)
Frame = -1 / +1
Query: 566 HFARDEDCISWQEEIQCRVPACVPADQGADIHNVYLYYHNLDSNPTHDSSGHLCLHPCVH 387
H A ED +S QEE+Q VPA +PADQGA IHN++L+ +NL+SN +HDS HLCLHP H
Sbjct: 466 HAACYEDRVSRQEEVQRGVPARLPADQGAYIHNIHLHPYNLNSNRSHDSPRHLCLHPRFH 645
Query: 386 ANW 378
A+W
Sbjct: 646 ADW 654
Score = 82.2 bits (173), Expect(3) = 3e-051
Identities = 33/48 (68%), Positives = 37/48 (77%)
Frame = +3 / -1
Query: 618 VVMFK**TRPYW*IKKRNESTISRTVPRFPECLRXSCSFSHHDXXLFS 761
+V+FK* T PYW*+KKRN +ISR VPRFPEC R CS SHHD LFS
Sbjct: 411 LVIFK*YTSPYW*MKKRNARSISRMVPRFPECRRGPCSLSHHDSQLFS 268
Score = 60.2 bits (125), Expect(3) = 3e-024
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -1 / +1
Query: 761 REKXXVMVGKRAGXS*AFWKAWHCS*NSAFVALLYLPVWSC 639
REK ++VG+RAG S A W+AWH S*N++ +A L+LPV +C
Sbjct: 268 REKLGIVVGQRAGTSSALWEAWHHS*NTSSIAFLHLPVRAC 390
Score = 56.1 bits (116), Expect(2) = 2e-033
Identities = 26/48 (54%), Positives = 30/48 (62%)
Frame = +1 / -2
Query: 619 W*CSNDKQDHTGK*RSATKALFQEQCHAFQNA*XXPALFPTMTXXFSL 762
W SND Q TG+*R+A +FQE CHA Q+A PAL PT FSL
Sbjct: 410 WLYSNDTQARTGR*RNAMLEVFQEWCHASQSAEEVPALCPTTIPSFSL 267
Score = 47.8 bits (98), Expect(3) = 3e-024
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = -2 / +2
Query: 553 MKTVSVGRRKFSAEFQLVFRL 491
MKTVSVGRR+FSAEFQLVFRL
Sbjct: 479 MKTVSVGRRRFSAEFQLVFRL 541
Score = 41.4 bits (84), Expect(3) = 3e-024
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -2 / +2
Query: 430 HMTVQDIFVCILAFMPT 380
HMTV DIFVCILAFMPT
Sbjct: 602 HMTVLDIFVCILAFMPT 652
Score = 24.0 bits (46), Expect(3) = 3e-051
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1 / -3
Query: 736 PTMTXXFSLXXXNTSTXXDXLIPVXXVI 819
P F NTST D L+P+ V+
Sbjct: 292 PPRFPAFLWRHTNTSTVTDPLVPISPVV 209
>gb|BU972175.1|BU972175 HB20N14r BC Hordeum vulgare subsp. vulgare cDNA clone HB20N14
5-PRIME, mRNA sequence
Length = 373
Score = 182 bits (393), Expect = 2e-045
Identities = 75/108 (69%), Positives = 88/108 (81%)
Frame = -2 / +3
Query: 421 VQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTPIAFL 242
++DI VC LAF+PTGWG+LLIAQ GLWGSV+ALAR YE+IMG+LLFTPI L
Sbjct: 27 IKDILVCFLAFLPTGWGILLIAQPCIPLFRVTGLWGSVRALARAYEVIMGMLLFTPITVL 206
Query: 241 AWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE*VADAA 98
+WFPFVSEFQ RMLFNQAFSRGLQISRILGG KK+RA+ K+*++ A
Sbjct: 207 SWFPFVSEFQTRMLFNQAFSRGLQISRILGGQKKERASSTKD*LSSFA 350
Score = 138 bits (297), Expect = 3e-032
Identities = 62/100 (62%), Positives = 66/100 (66%)
Frame = +3 / -1
Query: 117 SLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARNAIGVNNSKPMMIS*PR 296
SL ARSF PPRIR+IC PLL AWLNSI WNSET GN R IGV S PM+ S R
Sbjct: 331 SLVLEARSFF*PPRIRDICSPLLNAWLNSIRVWNSETKGNHDRTVIGVKRSIPMITSYAR 152
Query: 297 ASALTDPHSPICEIADLIVCAIRSKPHPVGMNARMQTKMS 416
A A TDPHSP+ + CAI S PHPVG NAR QT MS
Sbjct: 151 ARARTDPHSPVTRKRGMQGCAISSIPHPVGKNARKQTSMS 32
>gb|CD663693.1|CD663693 UCRHV18_06bd04_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_06bd04, mRNA sequence
Length = 550
Score = 172 bits (370), Expect = 2e-042
Identities = 70/83 (84%), Positives = 78/83 (93%)
Frame = -2 / -1
Query: 364 LIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQPRMLFNQAF 185
L+AQ ++ AI +GLWGS++ALARGYEIIMGLLLFTPIAFLAWFPFVSEFQ RMLFNQAF
Sbjct: 550 LVAQALKPAIMRVGLWGSIRALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAF 371
Query: 184 SRGLQISRILGGHKKDRAARNKE 116
SRGLQISRILGGHKKDRAAR+K+
Sbjct: 370 SRGLQISRILGGHKKDRAARSKD 302
Score = 137 bits (293), Expect(2) = 1e-031
Identities = 59/91 (64%), Positives = 65/91 (71%)
Frame = +3 / +3
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 255 IYLTTSYYGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 434
Query: 249 AIGVNNSKPMMIS*PRASALTDPHSPICEIA 341
AIGV +S PMMIS PRA A DPHSP IA
Sbjct: 435 AIGVKSSSPMMISYPRARARIDPHSPTLMIA 527
Score = 21.7 bits (41), Expect(2) = 1e-031
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +3
Query: 7 CNIQPGIIT 33
CN+QPGI T
Sbjct: 171 CNLQPGIHT 197
>gb|AY177665.1| Hordeum vulgare subsp. vulgare putative callose synthase mRNA,
complete cds
Length = 6180
Score = 137 bits (293), Expect(2) = 2e-040
Identities = 57/130 (43%), Positives = 79/130 (60%)
Frame = -2 / +3
Query: 526 KFSAEFQLVFRLXXXXXXXXXXXXXXXXXXIPHMTVQDIFVCILAFMPTGWGLLLIAQTM 347
K FQL RL I + V D+ ILA++PTGWG+L IA
Sbjct: 5439 KAMVHFQLFLRLVKSIALLVVLAGLVVAIAITRLAVVDVLASILAYVPTGWGILSIAVAW 5618
Query: 346 RSAISHMGLWGSVKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQPRMLFNQAFSRGLQI 167
+ + +GLW +V++LAR Y+ MG+++F PIA +WFPF+S FQ R+LFNQAFSRGL+I
Sbjct: 5619 KPIVKRLGLWKTVRSLARLYDAGMGMIIFVPIAICSWFPFISTFQTRLLFNQAFSRGLEI 5798
Query: 166 SRILGGHKKD 137
S IL G+ ++
Sbjct: 5799 SLILAGNNQN 5828
Score = 49.2 bits (101), Expect(2) = 2e-040
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -2 / +3
Query: 700 RGTVLEIVLSLRFFIYQYGLVYHLNITTHT 611
RG +LE +LSLRFFI+QYG+VYH+ + +
Sbjct: 5268 RGRILETILSLRFFIFQYGVVYHMKASNES 5357
>gb|AV931608.1|AV931608 AV931608 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23h14 3', mRNA sequence
Length = 358
Score = 165 bits (354), Expect = 4e-040
Identities = 67/80 (83%), Positives = 74/80 (92%)
Frame = -2 / -3
Query: 355 QTMRSAISHMGLWGSVKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQPRMLFNQAFSRG 176
Q ++ AI +GLWGS++ALARGYEIIMG LLFTPIAFLAWFPFVSEFQ RMLFNQAFSRG
Sbjct: 356 QALKPAIMRVGLWGSIRALARGYEIIMGXLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRG 177
Query: 175 LQISRILGGHKKDRAARNKE 116
LQISRILGGHKKDRAAR+K+
Sbjct: 176 LQISRILGGHKKDRAARSKD 117
Score = 135 bits (289), Expect = 3e-031
Identities = 58/91 (63%), Positives = 64/91 (70%)
Frame = +3 / +1
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 70 IYLTTSYDGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 249
Query: 249 AIGVNNSKPMMIS*PRASALTDPHSPICEIA 341
AIGV +S PMMIS PRA A DPH P IA
Sbjct: 250 AIGVKSSXPMMISYPRARARIDPHXPTLMIA 342
>gb|BG418775.1|BG418775 HVSMEk0024G07f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0024G07f, mRNA sequence
Length = 834
Score = 135 bits (290), Expect(2) = 4e-040
Identities = 57/126 (45%), Positives = 76/126 (60%)
Frame = -2 / +2
Query: 526 KFSAEFQLVFRLXXXXXXXXXXXXXXXXXXIPHMTVQDIFVCILAFMPTGWGLLLIAQTM 347
K FQL RL I + V D+ ILA++PTGWG+L IA
Sbjct: 269 KAMVHFQLFLRLVKSIALLVVLAGLVVAIAITRLAVVDVLASILAYVPTGWGILSIAVAW 448
Query: 346 RSAISHMGLWGSVKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQPRMLFNQAFSRGLQI 167
+ + +GLW +V++LAR Y+ MG+++F PIA +WFPF+S FQ R+LFNQAFSRGL+I
Sbjct: 449 KPIVKRLGLWKTVRSLARLYDAGMGMIIFVPIAICSWFPFISTFQTRLLFNQAFSRGLEI 628
Query: 166 SRILGG 149
S IL G
Sbjct: 629 SLILAG 646
Score = 49.2 bits (101), Expect(2) = 4e-040
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -2 / +2
Query: 700 RGTVLEIVLSLRFFIYQYGLVYHLNITTHT 611
RG +LE +LSLRFFI+QYG+VYH+ + +
Sbjct: 98 RGRILETILSLRFFIFQYGVVYHMKASNES 187
>gb|AV931716.1|AV931716 AV931716 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23o13 3', mRNA sequence
Length = 413
Score = 161 bits (347), Expect = 3e-039
Identities = 66/74 (89%), Positives = 71/74 (95%)
Frame = -2 / -1
Query: 337 ISHMGLWGSVKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQPRMLFNQAFSRGLQISRI 158
I +GLWGS++ALARGYEIIMGLLLFTPIAFLAWFPFVSEFQ RMLFNQAFSRGLQISRI
Sbjct: 413 IMRVGLWGSIRALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRI 234
Query: 157 LGGHKKDRAARNKE 116
LGGHKKDRAAR+K+
Sbjct: 233 LGGHKKDRAARSKD 192
Score = 135 bits (290), Expect(2) = 2e-031
Identities = 57/86 (66%), Positives = 63/86 (73%)
Frame = +3 / +1
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 145 IYLTTSYDGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 324
Query: 249 AIGVNNSKPMMIS*PRASALTDPHSP 326
AIGV +S PMMIS PRA A DPHSP
Sbjct: 325 AIGVKSSSPMMISYPRARARIDPHSP 402
Score = 21.7 bits (41), Expect(2) = 2e-031
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 7 CNIQPGIIT 33
CN+QPGI T
Sbjct: 61 CNLQPGIHT 87
>gb|AV926708.1|AV926708 AV926708 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23h14 5', mRNA sequence
Length = 300
Score = 149 bits (319), Expect = 3e-035
Identities = 65/93 (69%), Positives = 70/93 (75%)
Frame = +3 / -3
Query: 477 ISPLISRNTSWNSALNFLLPTDTVFITSKMTKIMTHEMX*TRTLFV*VVMFK**TRPYW* 656
ISPL SR TSWNSA NF PTDT FITS M K+ TH+ *TRTL V +VM + *T PYW*
Sbjct: 295 ISPLSSRXTSWNSAXNFRRPTDTAFITSNMKKMTTHDKQ*TRTLLVCLVMLRW*TSPYW* 116
Query: 657 IKKRNESTISRTVPRFPECLRXSCSFSHHDXXL 755
+KKR STISRTVPRFPE R SCSFSHHD L
Sbjct: 115 MKKRTASTISRTVPRFPEYFRGSCSFSHHDSQL 17
Score = 105 bits (224), Expect = 3e-022
Identities = 44/77 (57%), Positives = 58/77 (75%)
Frame = +2 / -2
Query: 473 EYQPLDQPEHKLELCTEFPPAN*YSLHHEQNDKDYDPRDAXNQNALRVSGDVQMINKTIL 652
E QPL+QP H+LEL EFPP + +SLHH+Q ++D +P A NQ+AL V G V+M+N+ IL
Sbjct: 299 EDQPLEQPXHELELRXEFPPTDRHSLHHQQYEEDDNP*QAINQDALGVFGYVEMVNEPIL 120
Query: 653 VNKEAQRKHYFKNSATL 703
V++EA KHY KN ATL
Sbjct: 119 VDEEAHGKHYLKNGATL 69
Score = 104 bits (221), Expect(2) = 9e-029
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = -2 / +3
Query: 757 KXXXSWWEKEQEXLRHSGKRGTVLEIVLSLRFFIYQYGLVYHLNITTHTKS 605
K SWWEKE E L++SGKRGTVLEIVL++RFFIYQYGLVYHLNIT HTKS
Sbjct: 15 KSWESWWEKEHEPLKYSGKRGTVLEIVLAVRFFIYQYGLVYHLNITKHTKS 167
Score = 42.8 bits (87), Expect(2) = 9e-029
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = -1 / +2
Query: 584 VGHNLCHFARDEDCISWQEEIQCRVPACVPADQGADI 474
+G +L H A DE C+ EI VPA VPA QGAD+
Sbjct: 188 MGCHLLHIAGDEGCVGRSAEIXRGVPARVPAAQGADL 298
>gb|CD663695.1|CD663695 UCRHV18_06bd07_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_06bd07, mRNA sequence
Length = 506
Score = 144 bits (309), Expect = 6e-034
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = -2 / -3
Query: 307 KALARGYEIIMGLLLFTPIAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAA 128
+ALARGYEIIMGLLLFTPIAFLAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRAA
Sbjct: 498 RALARGYEIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRAA 319
Query: 127 RNKE 116
R+K+
Sbjct: 318 RSKD 307
Score = 122 bits (260), Expect(2) = 3e-027
Identities = 52/79 (65%), Positives = 58/79 (73%)
Frame = +3 / +2
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 260 IYLTTSYYGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 439
Query: 249 AIGVNNSKPMMIS*PRASA 305
AIGV +S PMMIS PRA A
Sbjct: 440 AIGVKSSSPMMISYPRARA 496
Score = 21.7 bits (41), Expect(2) = 3e-027
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 7 CNIQPGIIT 33
CN+QPGI T
Sbjct: 176 CNLQPGIHT 202
>gb|BM374568.2|BM374568 EBpi03_SQ003_P19_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ003_P19 5', mRNA sequence
Length = 425
Score = 142 bits (304), Expect = 3e-033
Identities = 58/76 (76%), Positives = 67/76 (88%)
Frame = -2 / +1
Query: 325 GLWGSVKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGH 146
GLWGSV+ALAR YE+IMG+LLFTPI L+WFPFVSEFQ RMLFNQAFSRGLQISRILGG
Sbjct: 16 GLWGSVRALARAYEVIMGMLLFTPITVLSWFPFVSEFQTRMLFNQAFSRGLQISRILGGQ 195
Query: 145 KKDRAARNKE*VADAA 98
KK+RA+ K+*++ A
Sbjct: 196 KKERASSTKD*LSSFA 243
Score = 106 bits (226), Expect = 2e-022
Identities = 46/71 (64%), Positives = 49/71 (69%)
Frame = +3 / -1
Query: 117 SLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARNAIGVNNSKPMMIS*PR 296
SL ARSF PPRIR+IC PLL AWLNSI WNSET GN R IGV S PM+ S R
Sbjct: 224 SLVLEARSFF*PPRIRDICSPLLNAWLNSIRVWNSETKGNHDRTVIGVKRSIPMITSYAR 45
Query: 297 ASALTDPHSPI 329
A A TDPHSP+
Sbjct: 44 ARARTDPHSPV 12
>gb|BG415664.1|BG415664 HVSMEk0007G03f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0007G03f, mRNA sequence
Length = 641
Score = 137 bits (293), Expect = 1e-031
Identities = 57/130 (43%), Positives = 79/130 (60%)
Frame = -2 / -2
Query: 526 KFSAEFQLVFRLXXXXXXXXXXXXXXXXXXIPHMTVQDIFVCILAFMPTGWGLLLIAQTM 347
K FQL RL I + V D+ ILA++PTGWG+L IA
Sbjct: 613 KAMVHFQLFLRLVKSNALLVVLAGLVVAIAITRLAVVDVLASILAYVPTGWGILSIAVAW 434
Query: 346 RSAISHMGLWGSVKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQPRMLFNQAFSRGLQI 167
+ + +GLW +V++LAR Y+ MG+++F PIA +WFPF+S FQ R+LFNQAFSRGL+I
Sbjct: 433 KPIVKRLGLWKTVRSLARLYDAGMGMIIFVPIAICSWFPFISTFQTRLLFNQAFSRGLEI 254
Query: 166 SRILGGHKKD 137
S IL G+ ++
Sbjct: 253 SLILAGNNQN 224
>gb|BG417338.1|BG417338 HVSMEk0017J08f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0017J08f, mRNA sequence
Length = 839
Score = 137 bits (293), Expect = 1e-031
Identities = 57/130 (43%), Positives = 79/130 (60%)
Frame = -2 / +2
Query: 526 KFSAEFQLVFRLXXXXXXXXXXXXXXXXXXIPHMTVQDIFVCILAFMPTGWGLLLIAQTM 347
K FQL RL I + V D+ ILA++PTGWG+L IA
Sbjct: 47 KAMVHFQLFLRLVKSIALLVVLAGLVVAIAITRLAVVDVLASILAYVPTGWGILSIAVAW 226
Query: 346 RSAISHMGLWGSVKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQPRMLFNQAFSRGLQI 167
+ + +GLW +V++LAR Y+ MG+++F PIA +WFPF+S FQ R+LFNQAFSRGL+I
Sbjct: 227 KPIVKRLGLWKTVRSLARLYDAGMGMIIFVPIAICSWFPFISTFQTRLLFNQAFSRGLEI 406
Query: 166 SRILGGHKKD 137
S IL G+ ++
Sbjct: 407 SLILAGNNQN 436
>gb|AV837078.1|AV837078 AV837078 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd19k01, mRNA
sequence
Length = 618
Score = 132 bits (283), Expect = 2e-030
Identities = 50/97 (51%), Positives = 72/97 (74%)
Frame = -2 / -3
Query: 427 MTVQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTPIA 248
+ V D+ ILA++PTGWG+L IA + + +GLW +V++LAR Y+ MG+++F PIA
Sbjct: 601 LAVVDVLASILAYVPTGWGILSIAVAWKPIVKRLGLWKTVRSLARLYDAGMGMIIFVPIA 422
Query: 247 FLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKD 137
+WFPF+S FQ R+LFNQAFSRGL+IS IL G+ ++
Sbjct: 421 ICSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNQN 311
>gb|BU995906.1|BU995906 HM11L21r HM Hordeum vulgare subsp. vulgare cDNA clone HM11L21
5-PRIME, mRNA sequence
Length = 641
Score = 130 bits (278), Expect = 1e-029
Identities = 50/98 (51%), Positives = 71/98 (72%)
Frame = -2 / +3
Query: 427 MTVQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTPIA 248
+T+ D+F LAF+ TGW +L +A T + + +GLW SV+ ++R Y+ MG ++F PI
Sbjct: 66 LTIADLFASALAFLATGWCILCLAITWKRVVKTLGLWDSVREISRMYDAGMGAVIFAPIV 245
Query: 247 FLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDR 134
F +WFPFVS FQ R+LFNQAFSRGL+IS IL G+K ++
Sbjct: 246 FFSWFPFVSTFQSRILFNQAFSRGLEISLILAGNKANQ 359
>gb|BJ474020.1|BJ474020 BJ474020 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18e21 3', mRNA sequence
Length = 393
Score = 129 bits (277), Expect = 2e-029
Identities = 54/57 (94%), Positives = 56/57 (98%)
Frame = -2 / -2
Query: 286 EIIMGLLLFTPIAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE 116
EIIMGLLLFTPIAFLAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRAAR+K+
Sbjct: 392 EIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRAARSKD 222
Score = 115 bits (246), Expect(2) = 2e-025
Identities = 48/73 (65%), Positives = 54/73 (73%)
Frame = +3 / +1
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 175 IYLTTSYDGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 354
Query: 249 AIGVNNSKPMMIS 287
AIGV +S PMMIS
Sbjct: 355 AIGVKSSSPMMIS 393
Score = 21.7 bits (41), Expect(2) = 2e-025
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 7 CNIQPGIIT 33
CN+QPGI T
Sbjct: 91 CNLQPGIHT 117
>gb|BJ474554.1|BJ474554 BJ474554 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal14k06 3', mRNA sequence
Length = 415
Score = 129 bits (277), Expect = 2e-029
Identities = 54/57 (94%), Positives = 56/57 (98%)
Frame = -2 / -2
Query: 286 EIIMGLLLFTPIAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE 116
EIIMGLLLFTPIAFLAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRAAR+K+
Sbjct: 414 EIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRAARSKD 244
Score = 115 bits (246), Expect(2) = 2e-025
Identities = 48/73 (65%), Positives = 54/73 (73%)
Frame = +3 / +2
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 197 IYLTTSYDGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 376
Query: 249 AIGVNNSKPMMIS 287
AIGV +S PMMIS
Sbjct: 377 AIGVKSSSPMMIS 415
Score = 21.7 bits (41), Expect(2) = 2e-025
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 7 CNIQPGIIT 33
CN+QPGI T
Sbjct: 113 CNLQPGIHT 139
>gb|BJ476230.1|BJ476230 BJ476230 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal32p02 3', mRNA sequence
Length = 414
Score = 129 bits (277), Expect = 2e-029
Identities = 54/57 (94%), Positives = 56/57 (98%)
Frame = -2 / -2
Query: 286 EIIMGLLLFTPIAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE 116
EIIMGLLLFTPIAFLAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRAAR+K+
Sbjct: 413 EIIMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRAARSKD 243
Score = 115 bits (246), Expect(2) = 2e-025
Identities = 48/73 (65%), Positives = 54/73 (73%)
Frame = +3 / +1
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 196 IYLTTSYDGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 375
Query: 249 AIGVNNSKPMMIS 287
AIGV +S PMMIS
Sbjct: 376 AIGVKSSSPMMIS 414
Score = 21.7 bits (41), Expect(2) = 2e-025
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 7 CNIQPGIIT 33
CN+QPGI T
Sbjct: 112 CNLQPGIHT 138
>gb|CD662722.1|CD662722 UCRHV18_02df07_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_02df07, mRNA sequence
Length = 676
Score = 129 bits (277), Expect = 2e-029
Identities = 50/99 (50%), Positives = 70/99 (70%)
Frame = -2 / -2
Query: 430 HMTVQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTPI 251
H + D+F LAF+ TGW +L +A T + + +GLW SV+ ++R Y+ MG ++F PI
Sbjct: 675 HEAIADLFASALAFLATGWCILCLAITWKRVVKTLGLWDSVREISRMYDAGMGAVIFAPI 496
Query: 250 AFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDR 134
F +WFPFVS FQ R+LFNQAFSRGL+IS IL G+K ++
Sbjct: 495 VFFSWFPFVSTFQSRILFNQAFSRGLEISLILAGNKANQ 379
>gb|CB882058.1|CB882058 HM11L21w HM Hordeum vulgare subsp. vulgare cDNA clone HM11L21
3-PRIME, mRNA sequence
Length = 585
Score = 129 bits (276), Expect = 2e-029
Identities = 50/97 (51%), Positives = 70/97 (72%)
Frame = -2 / -1
Query: 424 TVQDIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTPIAF 245
T+ D+F LAF+ TGW +L +A T + + +GLW SV+ ++R Y+ MG ++F PI F
Sbjct: 576 TIADLFASALAFLATGWCILCLAITWKRVVKTLGLWDSVREISRMYDAGMGAVIFAPIVF 397
Query: 244 LAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDR 134
+WFPFVS FQ R+LFNQAFSRGL+IS IL G+K ++
Sbjct: 396 FSWFPFVSTFQSRILFNQAFSRGLEISLILAGNKANQ 286
>gb|BJ469981.1|BJ469981 BJ469981 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal14k06 5', mRNA sequence
Length = 483
Score = 123 bits (264), Expect = 1e-027
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = -2 / +1
Query: 277 MGLLLFTPIAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE 116
MGLLLFTPIAFLAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRAAR+K+
Sbjct: 22 MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRAARSKD 183
Score = 109 bits (233), Expect(2) = 1e-023
Identities = 45/70 (64%), Positives = 51/70 (72%)
Frame = +3 / -2
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 230 IYLTTSYDGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 51
Query: 249 AIGVNNSKPM 278
AIGV +S PM
Sbjct: 50 AIGVKSSSPM 21
Score = 21.7 bits (41), Expect(2) = 1e-023
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / -2
Query: 7 CNIQPGIIT 33
CN+QPGI T
Sbjct: 314 CNLQPGIHT 288
>gb|BJ472233.1|BJ472233 BJ472233 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal32p02 5', mRNA sequence
Length = 471
Score = 123 bits (264), Expect = 1e-027
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = -2 / +1
Query: 277 MGLLLFTPIAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE 116
MGLLLFTPIAFLAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRAAR+K+
Sbjct: 10 MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRAARSKD 171
Score = 109 bits (233), Expect(2) = 1e-023
Identities = 45/70 (64%), Positives = 51/70 (72%)
Frame = +3 / -2
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 218 IYLTTSYDGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 39
Query: 249 AIGVNNSKPM 278
AIGV +S PM
Sbjct: 38 AIGVKSSSPM 9
Score = 21.7 bits (41), Expect(2) = 1e-023
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / -2
Query: 7 CNIQPGIIT 33
CN+QPGI T
Sbjct: 302 CNLQPGIHT 276
>gb|BJ473277.1|BJ473277 BJ473277 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41i04 5', mRNA sequence
Length = 474
Score = 123 bits (264), Expect = 1e-027
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = -2 / +1
Query: 277 MGLLLFTPIAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE 116
MGLLLFTPIAFLAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRAAR+K+
Sbjct: 13 MGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRAARSKD 174
Score = 109 bits (233), Expect(2) = 1e-023
Identities = 45/70 (64%), Positives = 51/70 (72%)
Frame = +3 / -2
Query: 69 LYVGQHYQAHAASATHSLFRAARSFLCPPRIREICRPLLKAWLNSILGWNSETNGNQARN 248
+Y+ Y + + SL RAARSFLCPPRI EICRP LKAWL SI WNS+TNGN ARN
Sbjct: 221 IYLTTSYDGNLSIYLSSLLRAARSFLCPPRILEICRPRLKAWLKSIRVWNSDTNGNHARN 42
Query: 249 AIGVNNSKPM 278
AIGV +S PM
Sbjct: 41 AIGVKSSSPM 12
Score = 21.7 bits (41), Expect(2) = 1e-023
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / -2
Query: 7 CNIQPGIIT 33
CN+QPGI T
Sbjct: 305 CNLQPGIHT 279
>gb|CD663772.1|CD663772 UCRHV18_06cd06_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_06cd06, mRNA sequence
Length = 639
Score = 122 bits (261), Expect = 3e-027
Identities = 46/93 (49%), Positives = 67/93 (72%)
Frame = -2 / -1
Query: 415 DIFVCILAFMPTGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTPIAFLAW 236
D+ ILA++PTGWG+ IA + + +GLW +V++LA Y+ MG+++F PIA +W
Sbjct: 627 DVLASILAYVPTGWGIFSIAVAWKPIVKRLGLWKTVRSLAPLYDAGMGMIIFVPIAICSW 448
Query: 235 FPFVSEFQPRMLFNQAFSRGLQISRILGGHKKD 137
FPF+S FQ R+LFNQAFSRGL+I IL G+ ++
Sbjct: 447 FPFISPFQTRLLFNQAFSRGLEIFFILAGNNQN 349
>gb|BJ471422.1|BJ471422 BJ471422 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18e21 5', mRNA sequence
Length = 447
Score = 115 bits (245), Expect = 4e-025
Identities = 47/52 (90%), Positives = 49/52 (94%)
Frame = -2 / +1
Query: 271 LLLFTPIAFLAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE 116
LLLFTPI FLAWFPFV EFQ RMLFNQAFSRGLQISRILGGHKKDRAAR+K+
Sbjct: 1 LLLFTPIXFLAWFPFVXEFQTRMLFNQAFSRGLQISRILGGHKKDRAARSKD 156
>gb|CB876259.1|CB876259 HX10M03w HX Hordeum vulgare subsp. vulgare cDNA clone HX10M03
3-PRIME, mRNA sequence
Length = 559
Score = 114 bits (243), Expect = 8e-025
Identities = 43/81 (53%), Positives = 61/81 (75%)
Frame = -2 / -3
Query: 379 GWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTPIAFLAWFPFVSEFQPRML 200
GWG+L IA + + +GLW +V++LAR Y+ MG+++F PIA +WFPF+S FQ R+L
Sbjct: 557 GWGILSIAVAWKPIVKRLGLWKTVRSLARLYDAGMGMIIFVPIAICSWFPFISTFQTRLL 378
Query: 199 FNQAFSRGLQISRILGGHKKD 137
FNQAFSRGL+IS IL G+ ++
Sbjct: 377 FNQAFSRGLEISLILAGNNQN 315
>gb|BQ754043.1|BQ754043 EBca01_SQ002_K10_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ002_K10 5', mRNA sequence
Length = 440
Score = 105 bits (223), Expect = 4e-022
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -2 / +3
Query: 244 LAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE*VAD 104
LAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRA RNKE*V D
Sbjct: 24 LAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRATRNKE*VED 164
>gb|CB883678.1|CB883678 HQ02P09w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02P09
3-PRIME, mRNA sequence
Length = 541
Score = 105 bits (223), Expect = 4e-022
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -2 / +1
Query: 244 LAWFPFVSEFQPRMLFNQAFSRGLQISRILGGHKKDRAARNKE*VAD 104
LAWFPFVSEFQ RMLFNQAFSRGLQISRILGGHKKDRA RNKE*V D
Sbjct: 31 LAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRATRNKE*VED 171
>gb|CA027060.1|CA027060 HZ57M12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57M12
5-PRIME, mRNA sequence
Length = 384
Score = 102 bits (217), Expect = 3e-021
Identities = 40/50 (80%), Positives = 44/50 (88%)
Frame = -2 / +1
Query: 760 EKXXXSWWEKEQEXLRHSGKRGTVLEIVLSLRFFIYQYGLVYHLNITTHT 611
EK SWWEKE E L++SGKRGTVLEIVL++RFFIYQYGLVYHLNIT HT
Sbjct: 235 EKSWESWWEKEHEPLKYSGKRGTVLEIVLAVRFFIYQYGLVYHLNITKHT 384
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 346,418,688
Number of Sequences: 312970
Number of extensions: 4944909
Number of successful extensions: 34394
Number of sequences better than 1.0e-020: 58
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 9431237536
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)