TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404801.2.3
(1028 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF629097.2|BF629097 HVSMEb0009N21f Hordeum vulgare seedl... 412 e-118
gb|CA022160.1|CA022160 HZ42F08r HZ Hordeum vulgare subsp. v... 372 e-102
gb|BE195976.3|BE195976 HVSMEh0091A07f Hordeum vulgare 5-45 ... 319 5e-093
gb|BU969648.1|BU969648 HB12C12r BC Hordeum vulgare subsp. v... 333 8e-091
gb|BU986936.1|BU986936 HF13F11r HF Hordeum vulgare subsp. v... 311 5e-084
gb|BU974279.1|BU974279 HB27H05r BC Hordeum vulgare subsp. v... 303 1e-081
gb|BU985772.1|BU985772 HF08J07r HF Hordeum vulgare subsp. v... 301 5e-081
gb|BU975642.1|BU975642 HB31N05r BC Hordeum vulgare subsp. v... 275 2e-080
gb|CA031166.1|CA031166 HX09D06r HX Hordeum vulgare subsp. v... 263 4e-080
gb|CB876456.1|CB876456 HX11F07w HX Hordeum vulgare subsp. v... 263 4e-080
gb|AV917119.1|AV917119 AV917119 K. Sato unpublished cDNA li... 295 2e-079
gb|BU969384.1|BU969384 HB11G01r BC Hordeum vulgare subsp. v... 257 2e-078
gb|BG343570.1|BG343570 HVSMEg0006G18f Hordeum vulgare pre-a... 229 6e-075
gb|BU971417.1|BU971417 HB17I20r BC Hordeum vulgare subsp. v... 237 3e-072
gb|AV918379.1|AV918379 AV918379 K. Sato unpublished cDNA li... 235 1e-071
gb|BQ462861.1|BQ462861 HI02D22r HI Hordeum vulgare subsp. v... 268 3e-071
gb|AV918127.1|AV918127 AV918127 K. Sato unpublished cDNA li... 232 9e-071
gb|CB876294.1|CB876294 HX10N18w HX Hordeum vulgare subsp. v... 220 3e-067
gb|CB875735.1|CB875735 HX09D06w HX Hordeum vulgare subsp. v... 220 4e-067
gb|CB874380.1|CB874380 HX05B15w HX Hordeum vulgare subsp. v... 220 4e-067
gb|CB875995.1|CB875995 HX09P10w HX Hordeum vulgare subsp. v... 220 4e-067
gb|AV918025.1|AV918025 AV918025 K. Sato unpublished cDNA li... 209 6e-064
gb|BU970597.1|BU970597 HB15B24r BC Hordeum vulgare subsp. v... 222 2e-057
gb|BQ472674.1|BQ472674 HB01M23r BC Hordeum vulgare subsp. v... 179 5e-055
gb|AV931339.1|AV931339 AV931339 K. Sato unpublished cDNA li... 169 7e-052
gb|BM100617.2|BM100617 EBma01_SQ005_L23_R maternal, 4 DPA, ... 137 1e-049
gb|CA030113.1|CA030113 HX06C02r HX Hordeum vulgare subsp. v... 134 1e-043
gb|BJ451080.1|BJ451080 BJ451080 K. Sato unpublished cDNA li... 139 1e-043
gb|AV937068.1|AV937068 AV937068 K. Sato unpublished cDNA li... 135 7e-042
gb|BU971142.1|BU971142 HB16L19r BC Hordeum vulgare subsp. v... 115 2e-041
gb|AV916245.1|AV916245 AV916245 K. Sato unpublished cDNA li... 135 3e-041
gb|BE215344.1|BE215344 HV_CEb0006I15f Hordeum vulgare seedl... 104 5e-041
gb|CB876232.1|CB876232 HX10K21w HX Hordeum vulgare subsp. v... 130 3e-040
gb|BU996805.1|BU996805 HM14N04r HM Hordeum vulgare subsp. v... 122 3e-037
gb|BU976900.1|BU976900 HA10I02u HA Hordeum vulgare subsp. v... 119 4e-037
gb|BG415995.2|BG415995 HVSMEk0009F13f Hordeum vulgare testa... 134 1e-032
gb|BQ664937.1|BQ664937 HX01H11w HX Hordeum vulgare subsp. v... 109 6e-031
gb|BE194563.1|BE194563 HVSMEh0086A12f Hordeum vulgare 5-45 ... 63 3e-030
gb|BJ473415.1|BJ473415 BJ473415 K. Sato unpublished cDNA li... 132 3e-030
gb|CB874722.1|CB874722 HX06C02w HX Hordeum vulgare subsp. v... 132 3e-030
gb|CB874756.1|CB874756 HX06D16w HX Hordeum vulgare subsp. v... 129 2e-029
gb|AV921670.1|AV921670 AV921670 K. Sato unpublished cDNA li... 78 5e-029
gb|BE196054.2|BE196054 HVSMEh0091D21f Hordeum vulgare 5-45 ... 76 3e-027
gb|BQ659639.1|BQ659639 HF01C16w HF Hordeum vulgare subsp. v... 96 5e-027
gb|BG415324.2|BG415324 HVSMEk0006A22f Hordeum vulgare testa... 117 8e-026
gb|BU973725.1|BU973725 HB25M17r BC Hordeum vulgare subsp. v... 109 2e-024
gb|BU971696.1|BU971696 HB19G05r BC Hordeum vulgare subsp. v... 112 3e-024
gb|BJ468650.1|BJ468650 BJ468650 K. Sato unpublished cDNA li... 111 9e-024
gb|BU998822.1|BU998822 HI12E07r HI Hordeum vulgare subsp. v... 109 3e-023
gb|CB859263.1|CB859263 HI09O13w HI Hordeum vulgare subsp. v... 107 8e-023
gb|CD663310.1|CD663310 UCRHV18_05ad02_b1 Drought-stressed D... 78 6e-022
emb|AJ234606.1|HVU234606 Hordeum vulgare genomic DNA fragme... 52 9e-022
gb|BF265852.2|BF265852 HV_CEa0013I03f Hordeum vulgare seedl... 74 8e-021
>gb|BF629097.2|BF629097 HVSMEb0009N21f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009N21f, mRNA sequence
Length = 727
Score = 412 bits (895), Expect(2) = e-118
Identities = 165/204 (80%), Positives = 182/204 (89%)
Frame = +3 / +2
Query: 66 ISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLIDFYTSSGKRKPDQVIIFRDGVS 245
ISKYRA+V TQSPK EM+ SLFKPR EDDGLIRE LIDFYTSSGKRKPD VIIFRDGVS
Sbjct: 5 ISKYRATVHTQSPKQEMMASLFKPRGTEDDGLIRESLIDFYTSSGKRKPDHVIIFRDGVS 184
Query: 246 ESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPPGTVVDN 425
SQF QV+NIEL+QIIEACK LD+KW PKFT+I+AQKNHHT+FF P+NVPPGTVVD
Sbjct: 185 *SQFTQVINIELEQIIEACKCLDDKWEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDK 364
Query: 426 KVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAIS 605
+VCHPKNFDFYMCAHAGMIGT+RPTHYH+LHDEIGFS D+LQE VHSLSYVYQRSTTAIS
Sbjct: 365 QVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFSADELQEFVHSLSYVYQRSTTAIS 544
Query: 606 VVAPICYAHLAAAQVGQFIKFDEM 677
V API YAH+AAA VG F+KF++M
Sbjct: 545 VAAPIAYAHMAAAHVGTFMKFEDM 616
Score = 244 bits (528), Expect(2) = 5e-071
Identities = 112/219 (51%), Positives = 149/219 (68%)
Frame = -1 / -1
Query: 722 AARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQI 543
A RR P+M +RH+++L+E A++ M V S+ * APLVHIR+R+H+LL++
Sbjct: 661 AHRRVAPSMARRSVRHVLKLHEGAHVRRRHMRVRYWSSY*NRRRAPLVHIRKRVHKLLEL 482
Query: 542 IRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSV 363
+R EA LIMQ++V+ WPR +H SMRTHVE++VL MA +HH + +I W EK V
Sbjct: 481 VRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRRNIFWRICLEKSGV 302
Query: 362 MILLGNNQRELGIPFLIKKFASLDDLLQLNVQHLIKLTFANTVPEYDNLVRLSLPRTGVE 183
M+LL NN ELG+P ++K A LDDLL+LNV HL KL A+++PE DN+V L LPRT VE
Sbjct: 301 MVLLSNNDCELGLPLVVKALACLDDLLKLNVYHLGKLALADSIPEDDNVVWLPLPRTSVE 122
Query: 182 VNQTLPDQTIIFSFPWLKQ*VNHFHFW*LGADRCSVFRD 66
VN+ ++ IIFS PW KQ* +H F *L CSVFRD
Sbjct: 121 VNK*FANEAIIFSSPWFKQ*GHHLLFG*LSVHCCSVFRD 5
Score = 195 bits (421), Expect = 3e-049
Identities = 98/213 (46%), Positives = 128/213 (60%)
Frame = +2 / +1
Query: 65 YLEIQSICPHPITKNGND*LIV*ATGS*R*WSDPGVSD*LLHQFWEEKA*PSYHIQGRC* 244
+L IQS H +T+ G+D LIV* TG+*R*W ++ *LLH FWE +A P YH+QG
Sbjct: 4 HL*IQSNSAHSVTQTGDDGLIV*TTGN*R*WPHSRITY*LLH*FWEAEARPRYHLQGWSQ 183
Query: 245 RKSV*SGAEH*VATNHRGLQIS**EMESQVHVDYCPEESSH*IFHSWKAR*CPTRNCGGQ 424
K V G +H* +HRG+Q+ * ++ +QVH C EE SH IF AR C + GG
Sbjct: 184 LKPVYPGDKH*A*ADHRGMQVP*RQVGAQVHSHCCSEEPSHQIFPDKFARKCSSWYGGG* 363
Query: 425 QSLPSKELRFLHVCACWNDRDYEANSLPHPA**DRLQXXXXXXXXXFALLCVPKEHNSHI 604
S+PS+EL LHVCACW+D EAN+LP A**D LQ A LCVP+EH+
Sbjct: 364 TSVPSQEL*LLHVCACWDDWHVEANALPCSA**DWLQRGRAPGVCALAFLCVPEEHDGDF 543
Query: 605 SRCSHLLRTSGSCSGWPVHKVR*DVGDVLQSWR 703
S CS+ +R G + +H+V VG ++ WR
Sbjct: 544 SSCSNSVRAYGGGARGHLHEV*GHVGHFVEPWR 642
Score = 189 bits (407), Expect(3) = 1e-061
Identities = 88/140 (62%), Positives = 96/140 (68%)
Frame = -2 / -2
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L++VSD+SSNFM PT +GA T++AVVLLWY S LKPI
Sbjct: 642 PPWLDEVSDMSSNFMKVPTCAAAICAYAIGAATEIAVVLLWYT*ESECTNSWSSSALKPI 463
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FFWAI 344
SSCR W* VGL VPIIPACAHM*KSKF GW T LSTTVPGGT SG KNLV* FF A
Sbjct: 462 SSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGGTFSGEFVWKNLV*WFF*AT 283
Query: 343 INVNLGFHFSSRNLQASMIC 284
+ VNLG H SSR+L ASMIC
Sbjct: 282 MTVNLGSHLSSRHLHASMIC 223
Score = 173 bits (372), Expect = 2e-042
Identities = 97/191 (50%), Positives = 113/191 (59%)
Frame = +1 / +3
Query: 67 SRNTEHLSAPNHQKWK*LTHCLSHGKLKMMV*SGSV*LTSTPVLGRESLTKLSYSGTVLA 246
S NTE +H +* HCL+HG+LKMM + LTST VLG S T LS SG A
Sbjct: 6 SLNTEQQCTLSHPNRR*WPHCLNHGELKMMASFANHLLTSTLVLGSGSQTTLSSSGMESA 185
Query: 247 KVSLIRC*TLSCNKSSRLANFLMRNGIPSSR*LLPRRIITLNFSFLESQIMSHQELWWTT 426
K SL R *TLS ++SSR A+ L +G PSS+ LL RR IT +FS Q M WW
Sbjct: 186 KASLPR**TLSLSRSSRHASALTTSGSPSSQSLLLRRTITPDFSRQIRQKMFLLVRWWIN 365
Query: 427 KSAIQRTSISTCVRMLE*SGLRGQLTTTSCMMR*ASVLMICRSWCIRSLMCTKGAQQPYQ 606
K AI RT STCVRML * RGQ T CMMR AS RS C R LMCT+GA++ +Q
Sbjct: 366 KCAIPRTLTSTCVRMLG*LARRGQRITMFCMMRLASARTSSRSLCTRFLMCTRGARRRFQ 545
Query: 607 SLLPSATHIWQ 639
LL T IW+
Sbjct: 546 *LLQ*RTRIWR 578
Score = 142 bits (305), Expect(2) = 5e-039
Identities = 82/174 (47%), Positives = 94/174 (54%)
Frame = -3 / -3
Query: 699 HDWRTSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSH 520
H PT +T * P R+ EQ L CS GTHK+A+A P *S SH
Sbjct: 638 HGSTKCPTCPQTS*RCPRAPPPYARTLLEQLLKSPSCSSGTHKKASAQTPGARPR*SQSH 459
Query: 519 HAGCGSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHYLAFQE*KI*CDDSSGQ*S 340
HA G+ LAS +S QHAHTCR++SS DG L PP + H+LA KI CD SS Q
Sbjct: 458 HAEHGNALASTCQSSQHAHTCRSQSSWDGTLVYPPPYQEEHFLANLSGKIWCDGSSEQQ* 279
Query: 339 T*TWDSISHQEICKPR*FVATQCSAPD*TDFR*HRP*I**LGQAFSSQNWCRSQ 178
*TW Q C PR* QC +P *T F * P* ** G A +SQN CRSQ
Sbjct: 278 L*TWAPTCRQGTCMPR*SAQAQCLSPG*TGFS*LHP*R**RGLASASQN*CRSQ 117
Score = 60.6 bits (126), Expect(3) = 1e-061
Identities = 30/53 (56%), Positives = 32/53 (60%)
Frame = -2 / -2
Query: 223 ITWSGFLFPELV*KXXXXXXXXXXXXXXRGLNNESIISIFGDWVRTDALYFEI 65
ITWSGF FPELV*K RGLNNE+IIS GD V T ALY E+
Sbjct: 162 ITWSGFRFPELV*KSISDSRMRPSSSVPRGLNNEAIISCLGD*VCTVALYLEM 4
Score = 44.1 bits (90), Expect(2) = 5e-071
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -2 / -2
Query: 784 QQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
QQKN++L+TFSC SS T LP +V PP
Sbjct: 726 QQKNMKLITFSCSEASSGTEALPTDVWPP 640
Score = 39.1 bits (79), Expect(2) = 5e-039
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = -3 / -3
Query: 156 HHLQLPVA*TMSQSFPFLVIGCGQMLCISR 67
HHLQ PV *TM S P V C +LCI R
Sbjct: 95 HHLQFPVV*TMRPSSPVWVTECALLLCI*R 6
Score = 31.8 bits (63), Expect(2) = e-118
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +3 / +2
Query: 729 VQELPRLHEKVRSSMFFC 782
V EL LHEKV S MFFC
Sbjct: 671 VPELASLHEKVMSFMFFC 724
Score = 25.8 bits (50), Expect(3) = 1e-061
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1 / -1
Query: 782 AKEHRAPHFLMQARQLLDRNAARR 711
A+EH A HF MQ L AA R
Sbjct: 724 AEEHEAHHFFMQRGXLRH*GAAHR 653
>gb|CA022160.1|CA022160 HZ42F08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42F08
5-PRIME, mRNA sequence
Length = 520
Score = 372 bits (807), Expect = e-102
Identities = 143/159 (89%), Positives = 153/159 (96%)
Frame = +3 / +1
Query: 51 REWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLIDFYTSSGKRKPDQVIIF 230
REWPL+SKYRASVR+QSPK+EMIDSLFKP+ EDDGL+RECLIDFYTSSGKRKPDQ+IIF
Sbjct: 43 REWPLVSKYRASVRSQSPKLEMIDSLFKPQGTEDDGLVRECLIDFYTSSGKRKPDQIIIF 222
Query: 231 RDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPPG 410
RDGVSESQFNQVLNIEL QIIEACKFLDE WNPKFTLI+AQKNHHTKFF+PG PDNVPPG
Sbjct: 223 RDGVSESQFNQVLNIELDQIIEACKFLDENWNPKFTLIVAQKNHHTKFFMPGSPDNVPPG 402
Query: 411 TVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEI 527
TVVDN VCHP+N+DFYMCAHAGMIGTTRPTHYHILHDEI
Sbjct: 403 TVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEI 519
Score = 229 bits (495), Expect = 2e-059
Identities = 97/173 (56%), Positives = 129/173 (74%)
Frame = -1 / -2
Query: 527 YLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSVMILLG 348
YLIMQD+V+ WP P+HSSM HV++ + WMAD ++++S+ DI+ SR+EK V+ILL
Sbjct: 519 YLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIVRRSRHEKLCVVILLS 340
Query: 347 NNQRELGIPFLIKKFASLDDLLQLNVQHLIKLTFANTVPEYDNLVRLSLPRTGVEVNQTL 168
NNQ ELG+P I++ A L++L+ +VQHLIKL ANT+PE D+L+ SL RTGVEVN+TL
Sbjct: 339 NNQCELGVPIFIQELAGLNNLI*FDVQHLIKLALANTIPEDDDLIWFSLSRTGVEVNETL 160
Query: 167 PDQTIIFSFPWLKQ*VNHFHFW*LGADRCSVFRDKRPFTRTNNSSNRRYIRMS 9
P++ IIFS WL+Q*+ HF W*L A +FRDK PF+RTNN N YIR+S
Sbjct: 159 PNKAIIFSSLWLEQ*IYHF*LW*LRAH*SPIFRDKGPFSRTNNCCNGWYIRLS 1
Score = 181 bits (389), Expect = 7e-045
Identities = 86/157 (54%), Positives = 107/157 (68%)
Frame = +2 / +3
Query: 56 MASYLEIQSICPHPITKNGND*LIV*ATGS*R*WSDPGVSD*LLHQFWEEKA*PSYHIQG 235
MA LEI +TK ND IV AT +*R*W GVS *LLHQFW+EK +H+QG
Sbjct: 48 MAPCLEI*GFSALAVTKARNDRFIVQATRN*R*WPCSGVSH*LLHQFWKEKTRSDHHLQG 227
Query: 236 RC*RKSV*SGAEH*VATNHRGLQIS**EMESQVHVDYCPEESSH*IFHSWKAR*CPTRNC 415
C*R+ V*SGAEH + +N+ GLQ+ *++E QVH D C EES H +FH+W + CP+ +C
Sbjct: 228 WC*REPV*SGAEHRIRSNY*GLQVLG*KLEPQVHTDCCSEESPHKVFHAWIS*QCPSWHC 407
Query: 416 GGQQSLPSKELRFLHVCACWNDRDYEANSLPHPA**D 526
LPSKEL LHV +CWND D +AN+LP+PA**D
Sbjct: 408 C**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA**D 518
Score = 162 bits (349), Expect = 2e-039
Identities = 85/158 (53%), Positives = 95/158 (60%)
Frame = -3 / -1
Query: 528 LSHHAGCGSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHYLAFQE*KI*CDDSSG 349
+SHHAG G+ LA S+SFQH TC++ +SLDGR Q GH Q *K C DSS
Sbjct: 520 VSHHAGYGNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGHCQEIQA*KTLCGDSSE 341
Query: 348 Q*ST*TWDSISHQEICKPR*FVATQCSAPD*TDFR*HRP*I**LGQAFSSQNWCRSQSDT 169
Q S *TW S H C+P+*F +CSAPD*T R*H P* ** FS QNWCRSQ DT
Sbjct: 340 QQSV*TWGSNFHPRTCRPQ*FDLIRCSAPD*TGSR*HHP*R**SDLVFSFQNWCRSQ*DT 161
Query: 168 PGSDHHLQLPVA*TMSQSFPFLVIGCGQMLCISR*EAI 55
P HHLQ VA*TM+ SF LV ISR AI
Sbjct: 160 PEQGHHLQFLVA*TMNLSFLALVTASALKPYISRQGAI 47
Score = 143 bits (307), Expect(2) = 2e-056
Identities = 65/80 (81%), Positives = 69/80 (86%)
Frame = -2 / -3
Query: 526 ISSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FFWA 347
ISSCR+W* VGLVVPIIPA AHM*KS F GWQT LSTTVPGGTLSG PGMKN V *FF A
Sbjct: 518 ISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMKNFVW*FF*A 339
Query: 346 IINVNLGFHFSSRNLQASMI 287
I+VNLGF FSS+NLQAS+I
Sbjct: 338 TISVNLGFQFSSKNLQASII 279
Score = 137 bits (294), Expect = 9e-032
Identities = 81/153 (52%), Positives = 92/153 (60%)
Frame = +1 / +2
Query: 67 SRNTEHLSAPNHQKWK*LTHCLSHGKLKMMV*SGSV*LTSTPVLGRESLTKLSYSGTVLA 246
SRN A +HQ K* HC SH +LKMM GSV LTSTPVL RE+ + S SG VLA
Sbjct: 59 SRNIGLQCARSHQS*K**IHCSSHKELKMMALFGSVSLTSTPVLERENQIRSSSSGMVLA 238
Query: 247 KVSLIRC*TLSCNKSSRLANFLMRNGIPSSR*LLPRRIITLNFSFLESQIMSHQELWWTT 426
+ SLIRC*T + K R A+ M+ G PSS *LL RRI T +FS L+ MS L
Sbjct: 239 RASLIRC*TSN*IKLLRPASSWMKIGTPSSH*LLLRRITTQSFSCLDLLTMSLLALLLIM 418
Query: 427 KSAIQRTSISTCVRMLE*SGLRGQLTTTSCMMR 525
SAIQ TC MLE* G +GQ T SCMMR
Sbjct: 419 LSAIQGIMTFTCALMLE*LGQQGQHITISCMMR 517
Score = 96.8 bits (205), Expect(2) = 2e-056
Identities = 44/68 (64%), Positives = 46/68 (67%)
Frame = -2 / -3
Query: 214 SGFLFPELV*KXXXXXXXXXXXXXXRGLNNESIISIFGDWVRTDALYFEIRGHSRELTTA 35
SGFLFPELV*K GLNNESIIS FGD RT+ALYFE RGHSRE TTA
Sbjct: 206 SGFLFPELV*KSMRHSRTRPSSSVPCGLNNESIISSFGDCERTEALYFETRGHSREPTTA 27
Query: 34 ATDGTSEC 11
A DG S+C
Sbjct: 26 AMDGISDC 3
>gb|BE195976.3|BE195976 HVSMEh0091A07f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091A07f, mRNA sequence
Length = 1009
Score = 319 bits (691), Expect(2) = 5e-093
Identities = 124/151 (82%), Positives = 138/151 (91%)
Frame = +3 / +1
Query: 225 IFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVP 404
IFRDGVSESQF QV+NIEL+QIIEACK LD+KW PKFT+I+AQKNHHT+FF P+NVP
Sbjct: 1 IFRDGVSESQFTQVINIELEQIIEACKCLDDKWEPKFTVIVAQKNHHTRFFQTNSPENVP 180
Query: 405 PGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQ 584
PGTVVD +VCHPKNFDFYMCAHAGMIGT+RPTHYH+LHDEIGFS D+LQE VHSLSYVYQ
Sbjct: 181 PGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFSADELQEFVHSLSYVYQ 360
Query: 585 RSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
RSTTAISV API YAHLAAAQVG F+KF++M
Sbjct: 361 RSTTAISVAAPIAYAHLAAAQVGTFMKFEDM 453
Score = 189 bits (407), Expect(2) = 3e-056
Identities = 88/140 (62%), Positives = 96/140 (68%)
Frame = -2 / -3
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L++VSD+SSNFM PT +GA T++AVVLLWY S LKPI
Sbjct: 479 PPWLDEVSDMSSNFMKVPTCAAARCAYAIGAATEIAVVLLWYT*ESEWTNSWSSSALKPI 300
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FFWAI 344
SSCR W* VGL VPIIPACAHM*KSKF GW T LSTTVPGGT SG KNLV* FF A
Sbjct: 299 SSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGGTFSGEFVWKNLV*WFF*AT 120
Query: 343 INVNLGFHFSSRNLQASMIC 284
+ VNLG H SSR+L ASMIC
Sbjct: 119 MTVNLGSHLSSRHLHASMIC 60
Score = 179 bits (385), Expect(2) = 1e-049
Identities = 81/165 (49%), Positives = 114/165 (69%)
Frame = -1 / -2
Query: 722 AARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQI 543
A RR P++ +RH+++L+E A+L QM V S+ * APLVHIR+R+ +LL++
Sbjct: 498 AHRRVAPSLARRSVRHVLKLHEGAHLRRRQMRVRYWSSY*NRRRAPLVHIRKRVDKLLEL 319
Query: 542 IRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSV 363
+R EA LIMQ++V+ WPR +H SMRTHVE++VL MA +HH + +I W EK V
Sbjct: 318 VRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRRNIFWRICLEKSGV 139
Query: 362 MILLGNNQRELGIPFLIKKFASLDDLLQLNVQHLIKLTFANTVPE 228
M+LL NN ELG+P ++K A LDDLL+L+V HL KL FA+++PE
Sbjct: 138 MVLLSNNDCELGLPLVVKALACLDDLLKLDVYHLGKLAFADSIPE 4
Score = 133 bits (286), Expect = 1e-030
Identities = 69/159 (43%), Positives = 91/159 (57%)
Frame = +2 / +3
Query: 227 IQGRC*RKSV*SGAEH*VATNHRGLQIS**EMESQVHVDYCPEESSH*IFHSWKAR*CPT 406
+QG RK V G +H +HRG+Q+ * ++ +QVH C EE SH IF AR C +
Sbjct: 3 LQGWSQRKPVYPGDKHRA*ADHRGMQVP*RQVGAQVHSHCCSEEPSHQIFPDKFARKCSS 182
Query: 407 RNCGGQQSLPSKELRFLHVCACWNDRDYEANSLPHPA**DRLQXXXXXXXXXFALLCVPK 586
GG S+PS+EL LHVCACW+D EAN+LP A**D LQ A LCVP+
Sbjct: 183 WYGGG*TSVPSQEL*LLHVCACWDDWHVEANALPCSA**DWLQRGRAPGVCPLAFLCVPE 362
Query: 587 EHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQSWR 703
EH+ S CS+ +R SG + +H+V VG ++ R
Sbjct: 363 EHDGDFSSCSNSVRASGGGASGHLHEV*GHVGHFVEPGR 479
Score = 127 bits (272), Expect(2) = 2e-029
Identities = 70/151 (46%), Positives = 82/151 (54%)
Frame = -3 / -1
Query: 681 PTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGCGS 502
PT +T * PD R+ EQ L CS GTHK+A+ P *S SHHA G+
Sbjct: 457 PTCPQTS*RCPLAPPPDARTLLEQLLKSPSCSSGTHKKASGQTPGARPR*SQSHHAEHGN 278
Query: 501 ELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHYLAFQE*KI*CDDSSGQ*ST*TWDS 322
LAS +S QHAHTCR++SS DG L PP + H+LA KI CD SS Q *TW
Sbjct: 277 ALASTCQSSQHAHTCRSQSSWDGTLVYPPPYQEEHFLANLSGKIWCDGSSEQQ*L*TWAP 98
Query: 321 ISHQEICKPR*FVATQCSAPD*TDFR*HRP* 229
Q C PR* +C +P *T FR* P*
Sbjct: 97 TCRQGTCMPR*SAQARCLSPG*TGFR*LHP* 5
Score = 120 bits (257), Expect = 1e-026
Identities = 69/137 (50%), Positives = 80/137 (58%)
Frame = +1 / +2
Query: 229 SGTVLAKVSLIRC*TLSCNKSSRLANFLMRNGIPSSR*LLPRRIITLNFSFLESQIMSHQ 408
SG AK SL R *T S ++SSR A+ L +G PSS+ LL RR IT +FS Q M
Sbjct: 5 SGMESAKASLPR**TSSLSRSSRHASALTTSGSPSSQSLLLRRTITPDFSRQIRQKMFLL 184
Query: 409 ELWWTTKSAIQRTSISTCVRMLE*SGLRGQLTTTSCMMR*ASVLMICRSWCIRSLMCTKG 588
WW K AI RT STCVRML * RGQ T CMMR AS RS R LMCT+G
Sbjct: 185 VRWWINKCAIPRTLTSTCVRMLG*LARRGQRITMFCMMRLASARTSSRSLSTRFLMCTRG 364
Query: 589 AQQPYQSLLPSATHIWQ 639
A++ +Q LL T IW+
Sbjct: 365 ARRRFQ*LLQ*RTRIWR 415
Score = 50.1 bits (103), Expect(2) = 3e-056
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = -2 / -3
Query: 784 QQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
QQKN+EL TFSC RGSS T LP +V PP
Sbjct: 563 QQKNMELFTFSCSRGSSGTEALPTDVWPP 477
Score = 42.8 bits (87), Expect(2) = 5e-093
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3 / +1
Query: 729 VQELPRLHEKVRSSMFFC* 785
V ELPRLHEKV+SSMFFC*
Sbjct: 508 VPELPRLHEKVKSSMFFC* 564
Score = 38.2 bits (77), Expect(2) = 1e-049
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -1 / -2
Query: 785 SAKEHRAPHFLMQARQLLDRNAARR 711
SA+EH A HFLMQ RQL R AA R
Sbjct: 564 SAEEHGALHFLMQPRQLRHRGAAHR 490
Score = 22.1 bits (42), Expect(2) = 2e-029
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -3 / -1
Query: 735 PGPERCPP 712
P P RCPP
Sbjct: 514 PAPRRCPP 491
>gb|BU969648.1|BU969648 HB12C12r BC Hordeum vulgare subsp. vulgare cDNA clone HB12C12
5-PRIME, mRNA sequence
Length = 471
Score = 333 bits (722), Expect = 8e-091
Identities = 131/153 (85%), Positives = 142/153 (92%)
Frame = +3 / +2
Query: 150 DDGLIRECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNP 329
DDGLIRE LIDFYTSSGKRKPDQVIIFRDGVSESQF QV+NIEL+QIIEACK LD+KW P
Sbjct: 11 DDGLIRESLIDFYTSSGKRKPDQVIIFRDGVSESQFTQVINIELEQIIEACKCLDDKWEP 190
Query: 330 KFTLIIAQKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYH 509
KFT+I+AQKNHHT+FF P+NVPPGTVVD +VCHPKNFDFYMCAHAGMIGT+RPTHYH
Sbjct: 191 KFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYH 370
Query: 510 ILHDEIGFSPDDLQELVHSLSYVYQRSTTAISV 608
+LHDEIGFS D+LQE VHSLSYVYQRSTTAISV
Sbjct: 371 VLHDEIGFSADELQEFVHSLSYVYQRSTTAISV 469
Score = 190 bits (410), Expect = 9e-048
Identities = 82/147 (55%), Positives = 108/147 (73%)
Frame = -1 / -3
Query: 590 APLVHIRERMHQLLQIIRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADFVVHHS 411
APLVHIR+R+ +LL+++R EA LIMQ++V+ WPR +H SMRTHVE++VL MA +HH
Sbjct: 451 APLVHIRKRVDKLLELVRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHR 272
Query: 410 SWWDIIWLSRNEKFSVMILLGNNQRELGIPFLIKKFASLDDLLQLNVQHLIKLTFANTVP 231
+ +I W EK VM+LL NN ELG+P ++K A LDDLL+L+V HL KL FA+++P
Sbjct: 271 TRRNIFWRICLEKSGVMVLLSNNDCELGLPLVVKALACLDDLLKLDVYHLGKLAFADSIP 92
Query: 230 EYDNLVRLSLPRTGVEVNQTLPDQTII 150
E DNLV L LPRT VEVN+ P+ II
Sbjct: 91 EDDNLVWLPLPRTSVEVNK*FPN*AII 11
Score = 156 bits (336), Expect(2) = 2e-041
Identities = 73/108 (67%), Positives = 77/108 (71%)
Frame = -2 / -1
Query: 607 TDMAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPIIPACAHM*KSKFFGWQT 428
T++AVVLLWY S LKPISSCR W* VGL VPIIPACAHM*KSKF GW T
Sbjct: 468 TEIAVVLLWYT*ESEWTNSWSSSALKPISSCRTW*CVGLDVPIIPACAHM*KSKFLGWHT 289
Query: 427 LLSTTVPGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSRNLQASMIC 284
LSTTVPGGT SG KNLV* FF A + VNLG H SSR+L ASMIC
Sbjct: 288 CLSTTVPGGTFSGEFVWKNLV*WFF*ATMTVNLGSHLSSRHLHASMIC 145
Score = 150 bits (322), Expect = 1e-035
Identities = 73/152 (48%), Positives = 92/152 (60%)
Frame = +2 / +1
Query: 152 *WSDPGVSD*LLHQFWEEKA*PSYHIQGRC*RKSV*SGAEH*VATNHRGLQIS**EMESQ 331
*W + G++ *LLH FWE +A P YH+QG RK V G +H +HRG+Q+ * ++ +Q
Sbjct: 13 *WPNSGITY*LLH*FWEAEARPGYHLQGWSQRKPVYPGDKHRA*ADHRGMQVP*RQVGAQ 192
Query: 332 VHVDYCPEESSH*IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLPH 511
VH C EE SH IF AR C + GG S+PS+EL LHVCACW+D EAN+LP
Sbjct: 193 VHSHCCSEEPSHQIFPDKFARKCSSWYGGG*TSVPSQEL*LLHVCACWDDWHVEANALPC 372
Query: 512 PA**DRLQXXXXXXXXXFALLCVPKEHNSHIS 607
A**D LQ A LCVP+EH+ S
Sbjct: 373 SA**DWLQRGRAPGVCPLAFLCVPEEHDGDFS 468
Score = 141 bits (302), Expect = 7e-033
Identities = 74/147 (50%), Positives = 85/147 (57%)
Frame = -3 / -2
Query: 591 CSFGTHKRANAPAPADHQD*SLSHHAGCGSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQ 412
CS GTHK+A+ P *S SHHA G+ LAS +S QHAHTCR++SS DG L PP
Sbjct: 452 CSSGTHKKASGQTPGARPR*SQSHHAEHGNALASTCQSSQHAHTCRSQSSWDGTLVYPPP 273
Query: 411 FLVGHYLAFQE*KI*CDDSSGQ*ST*TWDSISHQEICKPR*FVATQCSAPD*TDFR*HRP 232
+ H+LA KI CD SS Q *TW Q C PR* +C +P *T FR* P
Sbjct: 272 YQEEHFLANLSGKIWCDGSSEQQ*L*TWAPTCRQGTCMPR*SAQARCLSPG*TGFR*LHP 93
Query: 231 *I**LGQAFSSQNWCRSQSDTPGSDHH 151
* ** G A +SQN CRSQ P HH
Sbjct: 92 *R**PGLASASQN*CRSQ*VIPELGHH 12
Score = 134 bits (288), Expect = 6e-031
Identities = 79/152 (51%), Positives = 91/152 (59%)
Frame = +1 / +3
Query: 151 MMV*SGSV*LTSTPVLGRESLTKLSYSGTVLAKVSLIRC*TLSCNKSSRLANFLMRNGIP 330
MM * G+ LTST VLG S T+LS SG AK SL R *T S ++SSR A+ L +G P
Sbjct: 12 MMA*FGNHLLTSTLVLGSGSQTRLSSSGMESAKASLPR**TSSLSRSSRHASALTTSGSP 191
Query: 331 SSR*LLPRRIITLNFSFLESQIMSHQELWWTTKSAIQRTSISTCVRMLE*SGLRGQLTTT 510
SS+ LL RR IT +FS Q M WW K AI RT STCVRML * RGQ T
Sbjct: 192 SSQSLLLRRTITPDFSRQIRQKMFLLVRWWINKCAIPRTLTSTCVRMLG*LARRGQRITM 371
Query: 511 SCMMR*ASVLMICRSWCIRSLMCTKGAQQPYQ 606
CMMR AS RS R LMCT+GA++ +Q
Sbjct: 372 FCMMRLASARTSSRSLSTRFLMCTRGARRRFQ 467
Score = 33.1 bits (66), Expect(2) = 2e-041
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2 / -1
Query: 223 ITWSGFLFPELV*K 182
ITWSGF FPELV*K
Sbjct: 84 ITWSGFRFPELV*K 43
>gb|BU986936.1|BU986936 HF13F11r HF Hordeum vulgare subsp. vulgare cDNA clone HF13F11
5-PRIME, mRNA sequence
Length = 664
Score = 311 bits (673), Expect = 5e-084
Identities = 124/161 (77%), Positives = 134/161 (83%)
Frame = +3 / +1
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLIDF 185
PG REWPLISKYRA+V TQSPK EM+ SLFKPR EDDGLIRE LIDF
Sbjct: 181 PGQSDRPSIAAVVSSREWPLISKYRATVHTQSPKQEMMASLFKPRGTEDDGLIRESLIDF 360
Query: 186 YTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHH 365
YTSSGKRKPDQVIIFRDGVSESQF QV+NIEL+QIIEACK LD+KW PKFT+I+AQKNHH
Sbjct: 361 YTSSGKRKPDQVIIFRDGVSESQFTQVINIELEQIIEACKCLDDKWEPKFTVIVAQKNHH 540
Query: 366 TKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGT 488
T+FF P+NVPPGTVVD +VCHPKNFDFYMCAHAGMIGT
Sbjct: 541 TRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGT 663
Score = 198 bits (426), Expect = 6e-050
Identities = 87/159 (54%), Positives = 111/159 (69%)
Frame = -1 / -2
Query: 482 DHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGIPFLIKKF 303
+H SMRTHVE++VL MA +HH + +I W EK VM+LL NN ELG+P ++K
Sbjct: 657 NHPSMRTHVEVKVLGMAHLFIHHRTRRNIFWRICLEKSGVMVLLSNNDCELGLPLVVKAL 478
Query: 302 ASLDDLLQLNVQHLIKLTFANTVPEYDNLVRLSLPRTGVEVNQTLPDQTIIFSFPWLKQ* 123
A LDDLL+L+V HL KL FA+++PE DNLV L LPRT VEVN+ P++ IIFS PW KQ*
Sbjct: 477 ACLDDLLKLDVYHLGKLAFADSIPEDDNLVWLPLPRTSVEVNK*FPNEAIIFSSPWFKQ* 298
Query: 122 VNHFHFW*LGADRCSVFRDKRPFTRTNNSSNRRYIRMSR 6
+H F *L CSVFRD+RP TRT++ SN R + + R
Sbjct: 297 GHHLLFG*LSVHCCSVFRDERPLTRTHHRSNGRPVGLPR 181
Score = 153 bits (329), Expect = 1e-036
Identities = 74/144 (51%), Positives = 95/144 (65%)
Frame = +2 / +3
Query: 50 S*MASYLEIQSICPHPITKNGND*LIV*ATGS*R*WSDPGVSD*LLHQFWEEKA*PSYHI 229
S*+AS+L IQS H +T+ G+D LIV* TG+*R*W G++ *LLH FWE +A P YH+
Sbjct: 225 S*VASHL*IQSNSAHSVTQTGDDGLIV*TTGN*R*WPHSGITY*LLH*FWEAEARPGYHL 404
Query: 230 QGRC*RKSV*SGAEH*VATNHRGLQIS**EMESQVHVDYCPEESSH*IFHSWKAR*CPTR 409
QG RK V G +H +HRG+Q+ * ++ +QVH C EE SH IF AR C +
Sbjct: 405 QGWSQRKPVYPGDKHRA*ADHRGMQVP*RQVGAQVHSHCCSEEPSHQIFPDKFARKCSSW 584
Query: 410 NCGGQQSLPSKELRFLHVCACWND 481
GG S+PS+EL LHVCACW+D
Sbjct: 585 YGGG*TSVPSQEL*LLHVCACWDD 656
Score = 138 bits (295), Expect = 7e-032
Identities = 74/142 (52%), Positives = 83/142 (58%)
Frame = -3 / -1
Query: 483 RSFQHAHTCRNRSSLDGRLCCPPQFLVGHYLAFQE*KI*CDDSSGQ*ST*TWDSISHQEI 304
+S QHAHTCR++SS DG L PP + H+LA KI CD SS Q *TW Q
Sbjct: 658 QSSQHAHTCRSQSSWDGTLVYPPPYQEEHFLANLSGKIWCDGSSEQQ*L*TWAPTCRQGT 479
Query: 303 CKPR*FVATQCSAPD*TDFR*HRP*I**LGQAFSSQNWCRSQSDTPGSDHHLQLPVA*TM 124
C PR* +C +P *T FR* P* ** G A +SQN CRSQ P HHLQ PV *TM
Sbjct: 478 CMPR*SAQARCLSPG*TGFR*LHP*R**PGLASASQN*CRSQ*VIPE*GHHLQFPVV*TM 299
Query: 123 SQSFPFLVIGCGQMLCISR*EA 58
S P V C +LCI R*EA
Sbjct: 298 RPSSPVWVTECALLLCI*R*EA 233
Score = 123 bits (263), Expect = 2e-027
Identities = 70/136 (51%), Positives = 82/136 (60%)
Frame = +1 / +2
Query: 67 SRNTEHLSAPNHQKWK*LTHCLSHGKLKMMV*SGSV*LTSTPVLGRESLTKLSYSGTVLA 246
S NTE +H +* HCL+HG+LKMM G+ LTST VLG S T+LS SG A
Sbjct: 242 SLNTEQQCTLSHPNRR*WPHCLNHGELKMMASFGNHLLTSTLVLGSGSQTRLSSSGMESA 421
Query: 247 KVSLIRC*TLSCNKSSRLANFLMRNGIPSSR*LLPRRIITLNFSFLESQIMSHQELWWTT 426
K SL R *T S ++SSR A+ L +G PSS+ LL RR IT +FS Q M WW
Sbjct: 422 KASLPR**TSSLSRSSRHASALTTSGSPSSQSLLLRRTITPDFSRQIRQKMFLLVRWWIN 601
Query: 427 KSAIQRTSISTCVRML 474
K AI RT STCVRML
Sbjct: 602 KCAIPRTLTSTCVRML 649
Score = 113 bits (241), Expect(2) = 7e-049
Identities = 51/68 (75%), Positives = 53/68 (77%)
Frame = -2 / -3
Query: 487 VPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSR 308
VPIIPACAHM*KSKF GW T LSTTVPGGT SG KNLV* FF A + VNLG H SSR
Sbjct: 662 VPIIPACAHM*KSKFLGWHTCLSTTVPGGTFSGEFVWKNLV*WFF*ATMTVNLGSHLSSR 483
Query: 307 NLQASMIC 284
+L ASMIC
Sbjct: 482 HLHASMIC 459
Score = 101 bits (215), Expect(2) = 7e-049
Identities = 46/73 (63%), Positives = 50/73 (68%)
Frame = -2 / -3
Query: 223 ITWSGFLFPELV*KXXXXXXXXXXXXXXRGLNNESIISIFGDWVRTDALYFEIRGHSREL 44
ITWSGF FPELV*K RGLNNE+IIS GD V T ALY E+RGHSREL
Sbjct: 398 ITWSGFRFPELV*KSISDSRMRPSSSVPRGLNNEAIISCLGD*VCTVALYLEMRGHSREL 219
Query: 43 TTAATDGTSECPG 5
TTAA +G S+CPG
Sbjct: 218 TTAAMEGLSDCPG 180
>gb|BU974279.1|BU974279 HB27H05r BC Hordeum vulgare subsp. vulgare cDNA clone HB27H05
5-PRIME, mRNA sequence
Length = 461
Score = 303 bits (656), Expect = 1e-081
Identities = 117/144 (81%), Positives = 131/144 (90%)
Frame = +3 / +1
Query: 246 ESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPPGTVVDN 425
ESQF QV+NIEL+QIIEACK LD+KW PKFT+I+AQKNHHT+FF P+NVPPGTVVD
Sbjct: 13 ESQFTQVINIELEQIIEACKCLDDKWEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDK 192
Query: 426 KVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAIS 605
+VCHPKNFDFYMCAHAGMIGT+RPTHYH+LHDEIGFS D+LQE VHSLSYVYQRSTTAIS
Sbjct: 193 QVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFSADELQEFVHSLSYVYQRSTTAIS 372
Query: 606 VVAPICYAHLAAAQVGQFIKFDEM 677
V API YAHLAAAQVG F+KF++M
Sbjct: 373 VAAPIAYAHLAAAQVGTFMKFEDM 444
Score = 184 bits (397), Expect = 6e-046
Identities = 86/137 (62%), Positives = 94/137 (68%)
Frame = -2 / -1
Query: 694 LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPISSC 515
L++VSD+SSNFM PT +GA T++AVVLLWY S LKPISSC
Sbjct: 461 LDEVSDMSSNFMKVPTCAAARCAYAIGAATEIAVVLLWYT*ESEWTNSWSSSALKPISSC 282
Query: 514 RMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FFWAIINV 335
R W* VGL VPIIPACAHM*KSKF GW T LSTTVPGGT SG KNLV* FF A + V
Sbjct: 281 RTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGGTFSGEFVWKNLV*WFF*ATMTV 102
Query: 334 NLGFHFSSRNLQASMIC 284
NLG H SSR+L ASMIC
Sbjct: 101 NLGSHLSSRHLHASMIC 51
Score = 165 bits (354), Expect = 5e-040
Identities = 75/147 (51%), Positives = 103/147 (70%)
Frame = -1 / -3
Query: 683 LRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDVV 504
+RH+++L+E A+L QM V S+ * APLVHIR+R+ +LL+++R EA LIMQ++V
Sbjct: 450 VRHVLKLHEGAHLRRRQMRVRYWSSY*NRRRAPLVHIRKRVDKLLELVRAEANLIMQNMV 271
Query: 503 VSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGI 324
+ WPR +H SMRTHVE++VL MA +HH + +I W EK VM+LL NN ELG+
Sbjct: 270 MRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRRNIFWRICLEKSGVMVLLSNNDCELGL 91
Query: 323 PFLIKKFASLDDLLQLNVQHLIKLTFA 243
P ++K A LDDLL+L+V HL KL FA
Sbjct: 90 PLVVKALACLDDLLKLDVYHLGKLAFA 10
Score = 133 bits (285), Expect = 2e-030
Identities = 67/150 (44%), Positives = 88/150 (58%)
Frame = +2 / +3
Query: 245 RKSV*SGAEH*VATNHRGLQIS**EMESQVHVDYCPEESSH*IFHSWKAR*CPTRNCGGQ 424
RK V G +H +HRG+Q+ * ++ +QVH C EE SH IF AR C + GG
Sbjct: 12 RKPVYPGDKHRA*ADHRGMQVP*RQVGAQVHSHCCSEEPSHQIFPDKFARKCSSWYGGG* 191
Query: 425 QSLPSKELRFLHVCACWNDRDYEANSLPHPA**DRLQXXXXXXXXXFALLCVPKEHNSHI 604
S+PS+EL LHVCACW+D EAN+LP A**D LQ A LCVP+EH+
Sbjct: 192 TSVPSQEL*LLHVCACWDDWHVEANALPCSA**DWLQRGRAPGVCPLAFLCVPEEHDGDF 371
Query: 605 SRCSHLLRTSGSCSGWPVHKVR*DVGDVLQ 694
S CS+ +R SG +G +H+V VG ++
Sbjct: 372 SSCSNSVRASGGGAGGHLHEV*GHVGHFVE 461
Score = 129 bits (276), Expect = 3e-029
Identities = 68/146 (46%), Positives = 80/146 (54%)
Frame = -3 / -2
Query: 681 PTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGCGS 502
PT +T * P PD R+ EQ L CS GTHK+A+ P *S SHHA G+
Sbjct: 448 PTCPQTS*RCPPAPPPDARTLLEQLLKSPSCSSGTHKKASGQTPGARPR*SQSHHAEHGN 269
Query: 501 ELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHYLAFQE*KI*CDDSSGQ*ST*TWDS 322
LAS +S QHAHTCR++SS DG L PP + H+LA KI CD SS Q *TW
Sbjct: 268 ALASTCQSSQHAHTCRSQSSWDGTLVYPPPYQEEHFLANLSGKIWCDGSSEQQ*L*TWAP 89
Query: 321 ISHQEICKPR*FVATQCSAPD*TDFR 244
Q C PR* +C +P *T FR
Sbjct: 88 TCRQGTCMPR*SAQARCLSPG*TGFR 11
Score = 118 bits (252), Expect = 6e-026
Identities = 67/132 (50%), Positives = 78/132 (59%)
Frame = +1 / +2
Query: 244 AKVSLIRC*TLSCNKSSRLANFLMRNGIPSSR*LLPRRIITLNFSFLESQIMSHQELWWT 423
AK SL R *T S ++SSR A+ L +G PSS+ LL RR IT +FS Q M WW
Sbjct: 11 AKASLPR**TSSLSRSSRHASALTTSGSPSSQSLLLRRTITPDFSRQIRQKMFLLVRWWI 190
Query: 424 TKSAIQRTSISTCVRMLE*SGLRGQLTTTSCMMR*ASVLMICRSWCIRSLMCTKGAQQPY 603
K AI RT STCVRML * RGQ T CMMR AS RS R LMCT+GA++ +
Sbjct: 191 NKCAIPRTLTSTCVRMLG*LARRGQRITMFCMMRLASARTSSRSLSTRFLMCTRGARRRF 370
Query: 604 QSLLPSATHIWQ 639
Q LL T IW+
Sbjct: 371 Q*LLQ*RTRIWR 406
>gb|BU985772.1|BU985772 HF08J07r HF Hordeum vulgare subsp. vulgare cDNA clone HF08J07
5-PRIME, mRNA sequence
Length = 493
Score = 301 bits (651), Expect = 5e-081
Identities = 116/143 (81%), Positives = 130/143 (90%)
Frame = +3 / +1
Query: 249 SQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPPGTVVDNK 428
SQF QV+NIEL+QIIEACK LD+KW PKFT+I+AQKNHHT+FF P+NVPPGTVVD +
Sbjct: 1 SQFTQVINIELEQIIEACKCLDDKWEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQ 180
Query: 429 VCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISV 608
VCHPKNFDFYMCAHAGMIGT+RPTHYH+LHDEIGFS D+LQE VHSLSYVYQRSTTAISV
Sbjct: 181 VCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFSADELQEFVHSLSYVYQRSTTAISV 360
Query: 609 VAPICYAHLAAAQVGQFIKFDEM 677
API YAHLAAAQVG F+KF++M
Sbjct: 361 AAPIAYAHLAAAQVGTFMKFEDM 429
Score = 189 bits (407), Expect(2) = 7e-048
Identities = 88/140 (62%), Positives = 96/140 (68%)
Frame = -2 / -3
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L++VSD+SSNFM PT +GA T++AVVLLWY S LKPI
Sbjct: 455 PPWLDEVSDMSSNFMKVPTCAAARCAYAIGAATEIAVVLLWYT*ESEWTNSWSSSALKPI 276
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FFWAI 344
SSCR W* VGL VPIIPACAHM*KSKF GW T LSTTVPGGT SG KNLV* FF A
Sbjct: 275 SSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGGTFSGEFVWKNLV*WFF*AT 96
Query: 343 INVNLGFHFSSRNLQASMIC 284
+ VNLG H SSR+L ASMIC
Sbjct: 95 MTVNLGSHLSSRHLHASMIC 36
Score = 166 bits (358), Expect = 1e-040
Identities = 77/157 (49%), Positives = 107/157 (68%)
Frame = -1 / -2
Query: 722 AARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQI 543
A RR P++ +RH+++L+E A+L QM V S+ * APLVHIR+R+ +LL++
Sbjct: 474 AHRRVAPSLARRSVRHVLKLHEGAHLRRRQMRVRYWSSY*NRRRAPLVHIRKRVDKLLEL 295
Query: 542 IRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSV 363
+R EA LIMQ++V+ WPR +H SMRTHVE++VL MA +HH + +I W EK V
Sbjct: 294 VRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRRNIFWRICLEKSGV 115
Query: 362 MILLGNNQRELGIPFLIKKFASLDDLLQLNVQHLIKL 252
M+LL NN ELG+P ++K A LDDLL+L+V HL KL
Sbjct: 114 MVLLSNNDCELGLPLVVKALACLDDLLKLDVYHLGKL 4
Score = 130 bits (279), Expect = 1e-029
Identities = 65/147 (44%), Positives = 86/147 (58%)
Frame = +2 / +3
Query: 263 GAEH*VATNHRGLQIS**EMESQVHVDYCPEESSH*IFHSWKAR*CPTRNCGGQQSLPSK 442
G +H +HRG+Q+ * ++ +QVH C EE SH IF AR C + GG S+PS+
Sbjct: 15 GDKHRA*ADHRGMQVP*RQVGAQVHSHCCSEEPSHQIFPDKFARKCSSWYGGG*TSVPSQ 194
Query: 443 ELRFLHVCACWNDRDYEANSLPHPA**DRLQXXXXXXXXXFALLCVPKEHNSHISRCSHL 622
EL LHVCACW+D EAN+LP A**D LQ A LCVP+EH+ S CS+
Sbjct: 195 EL*LLHVCACWDDWHVEANALPCSA**DWLQRGRAPGVCPLAFLCVPEEHDGDFSSCSNS 374
Query: 623 LRTSGSCSGWPVHKVR*DVGDVLQSWR 703
+R SG +G +H+V VG ++ R
Sbjct: 375 VRASGGGAGGHLHEV*GHVGHFVEPGR 455
Score = 124 bits (266), Expect = 7e-028
Identities = 66/143 (46%), Positives = 78/143 (54%)
Frame = -3 / -1
Query: 681 PTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGCGS 502
PT +T * P PD R+ EQ L CS GTHK+A+ P *S SHHA G+
Sbjct: 433 PTCPQTS*RCPPAPPPDARTLLEQLLKSPSCSSGTHKKASGQTPGARPR*SQSHHAEHGN 254
Query: 501 ELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHYLAFQE*KI*CDDSSGQ*ST*TWDS 322
LAS +S QHAHTCR++SS DG L PP + H+LA KI CD SS Q *TW
Sbjct: 253 ALASTCQSSQHAHTCRSQSSWDGTLVYPPPYQEEHFLANLSGKIWCDGSSEQQ*L*TWAP 74
Query: 321 ISHQEICKPR*FVATQCSAPD*T 253
Q C PR* +C +P *T
Sbjct: 73 TCRQGTCMPR*SAQARCLSPG*T 5
Score = 114 bits (243), Expect = 1e-024
Identities = 65/129 (50%), Positives = 76/129 (58%)
Frame = +1 / +2
Query: 253 SLIRC*TLSCNKSSRLANFLMRNGIPSSR*LLPRRIITLNFSFLESQIMSHQELWWTTKS 432
SL R *T S ++SSR A+ L +G PSS+ LL RR IT +FS Q M WW K
Sbjct: 5 SLPR**TSSLSRSSRHASALTTSGSPSSQSLLLRRTITPDFSRQIRQKMFLLVRWWINKC 184
Query: 433 AIQRTSISTCVRMLE*SGLRGQLTTTSCMMR*ASVLMICRSWCIRSLMCTKGAQQPYQSL 612
AI RT STCVRML * RGQ T CMMR AS RS R LMCT+GA++ +Q L
Sbjct: 185 AIPRTLTSTCVRMLG*LARRGQRITMFCMMRLASARTSSRSLSTRFLMCTRGARRRFQ*L 364
Query: 613 LPSATHIWQ 639
L T IW+
Sbjct: 365 LQ*RTRIWR 391
Score = 22.1 bits (42), Expect(2) = 7e-048
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -3 / -1
Query: 735 PGPERCPP 712
P P RCPP
Sbjct: 490 PAPRRCPP 467
>gb|BU975642.1|BU975642 HB31N05r BC Hordeum vulgare subsp. vulgare cDNA clone HB31N05
5-PRIME, mRNA sequence
Length = 617
Score = 275 bits (595), Expect(2) = 2e-080
Identities = 105/129 (81%), Positives = 117/129 (90%)
Frame = +3 / +2
Query: 291 IEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAH 470
IEACK LD+KW PKFT+I+AQKNHHT+FF P+NVPPGTVVD +VCHPKNFDFYMCAH
Sbjct: 11 IEACKCLDDKWEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAH 190
Query: 471 AGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQV 650
AGMIGT+RPTHYH+LHDEIGFS D+LQE VHSLSYVYQRSTTAISV API YAHLAAAQV
Sbjct: 191 AGMIGTSRPTHYHVLHDEIGFSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQV 370
Query: 651 GQFIKFDEM 677
G F+KF++M
Sbjct: 371 GTFMKFEDM 397
Score = 182 bits (392), Expect(2) = 9e-055
Identities = 85/139 (61%), Positives = 95/139 (68%)
Frame = -2 / -3
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L++VSD+SSNFM PT +GA T++AVVLLWY S LKPI
Sbjct: 423 PPWLDEVSDMSSNFMKVPTCAAARCAYAIGAATEIAVVLLWYT*ESEWTNSWSSSALKPI 244
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FFWAI 344
SSCR W* VGL VPIIPACAHM*KSKF GW T LSTTVPGGT SG KNLV* FF A
Sbjct: 243 SSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGGTFSGEFVWKNLV*WFF*AT 64
Query: 343 INVNLGFHFSSRNLQASMI 287
+ VNLG H SSR+L AS++
Sbjct: 63 MTVNLGSHLSSRHLHASIL 7
Score = 148 bits (318), Expect(2) = 5e-042
Identities = 68/144 (47%), Positives = 96/144 (66%)
Frame = -1 / -2
Query: 722 AARRSMPAMTGGRLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQI 543
A RR P++ +RH+++L+E A+L QM V S+ * APLVHIR+R+ +LL++
Sbjct: 442 AHRRVAPSLARRSVRHVLKLHEGAHLRRRQMRVRYWSSY*NRRRAPLVHIRKRVDKLLEL 263
Query: 542 IRTEAYLIMQDVVVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSV 363
+R EA LIMQ++V+ WPR +H SMRTHVE++VL MA +HH + +I W EK V
Sbjct: 262 VRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRRNIFWRICLEKSGV 83
Query: 362 MILLGNNQRELGIPFLIKKFASLD 291
M+LL NN ELG+P ++K A LD
Sbjct: 82 MVLLSNNDCELGLPLVVKALACLD 11
Score = 124 bits (265), Expect = 9e-028
Identities = 62/137 (45%), Positives = 81/137 (59%)
Frame = +2 / +1
Query: 293 RGLQIS**EMESQVHVDYCPEESSH*IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCAC 472
RG+Q+ * ++ +QVH C EE SH IF AR C + GG S+PS+EL LHVCAC
Sbjct: 13 RGMQVP*RQVGAQVHSHCCSEEPSHQIFPDKFARKCSSWYGGG*TSVPSQEL*LLHVCAC 192
Query: 473 WNDRDYEANSLPHPA**DRLQXXXXXXXXXFALLCVPKEHNSHISRCSHLLRTSGSCSGW 652
W+D EAN+LP A**D LQ A LCVP+EH+ S CS+ +R SG +G
Sbjct: 193 WDDWHVEANALPCSA**DWLQRGRAPGVCPLAFLCVPEEHDGDFSSCSNSVRASGGGAGG 372
Query: 653 PVHKVR*DVGDVLQSWR 703
+H+V VG ++ R
Sbjct: 373 HLHEV*GHVGHFVEPGR 423
Score = 116 bits (247), Expect(2) = 5e-026
Identities = 61/130 (46%), Positives = 71/130 (54%)
Frame = -3 / -1
Query: 681 PTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGCGS 502
PT +T * P PD R+ EQ L CS GTHK+A+ P *S SHHA G+
Sbjct: 401 PTCPQTS*RCPPAPPPDARTLLEQLLKSPSCSSGTHKKASGQTPGARPR*SQSHHAEHGN 222
Query: 501 ELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHYLAFQE*KI*CDDSSGQ*ST*TWDS 322
LAS +S QHAHTCR++SS DG L PP + H+LA KI CD SS Q *TW
Sbjct: 221 ALASTCQSSQHAHTCRSQSSWDGTLVYPPPYQEEHFLANLSGKIWCDGSSEQQ*L*TWAP 42
Query: 321 ISHQEICKPR 292
Q C PR
Sbjct: 41 TCRQGTCMPR 12
Score = 105 bits (225), Expect = 3e-022
Identities = 58/118 (49%), Positives = 68/118 (57%)
Frame = +1 / +3
Query: 286 KSSRLANFLMRNGIPSSR*LLPRRIITLNFSFLESQIMSHQELWWTTKSAIQRTSISTCV 465
+ SR A+ L +G PSS+ LL RR IT +FS Q M WW K AI RT STCV
Sbjct: 6 RGSRHASALTTSGSPSSQSLLLRRTITPDFSRQIRQKMFLLVRWWINKCAIPRTLTSTCV 185
Query: 466 RMLE*SGLRGQLTTTSCMMR*ASVLMICRSWCIRSLMCTKGAQQPYQSLLPSATHIWQ 639
RML * RGQ T CMMR AS RS R LMCT+GA++ +Q LL T IW+
Sbjct: 186 RMLG*LARRGQRITMFCMMRLASARTSSRSLSTRFLMCTRGARRRFQ*LLQ*RTRIWR 359
Score = 51.9 bits (107), Expect(2) = 9e-055
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -2 / -3
Query: 784 QQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
QQKN+ELLTFSC RGSS T LP +V PP
Sbjct: 507 QQKNMELLTFSCSRGSSGTEALPTDVWPP 421
Score = 45.1 bits (92), Expect(2) = 2e-080
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3 / +2
Query: 729 VQELPRLHEKVRSSMFFC*AVVLL 800
V ELPRLHEKVRSSMFFC* LL
Sbjct: 452 VPELPRLHEKVRSSMFFC*WARLL 523
Score = 43.2 bits (88), Expect(2) = 5e-042
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -1 / -2
Query: 830 ITRGVHHPPKK*NHGSAKEHRAPHFLMQARQLLDRNAARR 711
+T+ H ++ SA+EH APHFLMQ RQL R AA R
Sbjct: 553 VTKVSIHQVRQQPSPSAEEHGAPHFLMQPRQLRHRGAAHR 434
Score = 22.1 bits (42), Expect(2) = 5e-026
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -3 / -1
Query: 735 PGPERCPP 712
P P RCPP
Sbjct: 458 PAPRRCPP 435
>gb|CA031166.1|CA031166 HX09D06r HX Hordeum vulgare subsp. vulgare cDNA clone HX09D06
5-PRIME, mRNA sequence
Length = 647
Score = 263 bits (569), Expect(2) = 4e-080
Identities = 102/114 (89%), Positives = 109/114 (95%)
Frame = +3 / +1
Query: 336 TLIIAQKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHIL 515
TLI+AQKNHHTKFF+PG PDNVPPGTVVDN VCHP+N+DFYMCAHAGMIGTTRPTHYHIL
Sbjct: 40 TLIVAQKNHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHIL 219
Query: 516 HDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
HDEI F+ DDLQ+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 220 HDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 381
Score = 180 bits (388), Expect(2) = 6e-054
Identities = 73/123 (59%), Positives = 96/123 (78%)
Frame = -1 / -3
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDV 507
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD+
Sbjct: 390 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQDM 211
Query: 506 VVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSVMILLGNNQRELG 327
V+ WP P+HSSM HV++ + WMAD ++++S+ DI+ SR+EK V+ILL NNQ G
Sbjct: 210 VMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIVRRSRHEKLCVVILLSNNQCNWG 31
Query: 326 IPF 318
F
Sbjct: 30 SNF 22
Score = 166 bits (358), Expect(2) = 7e-045
Identities = 82/123 (66%), Positives = 87/123 (70%)
Frame = -2 / -1
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L+DVSDISSNFMN T *Q+G TTD+AVVLLWY S K I
Sbjct: 407 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 228
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FFWAI 344
SSCR+W* VGLVVPIIPA AHM*KS F GWQT LSTTVPGGTLSG PGMKN V *FF A
Sbjct: 227 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMKNFVW*FF*AT 48
Query: 343 INV 335
I+V
Sbjct: 47 ISV 39
Score = 144 bits (309), Expect = 8e-034
Identities = 68/120 (56%), Positives = 82/120 (68%)
Frame = +2 / +3
Query: 335 HVDYCPEESSH*IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLPHP 514
+ D C EES H +FH+W + CP+ +C LPSKEL LHV +CWND D +AN+LP+P
Sbjct: 39 YTDCCSEESPHKVFHAWIS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYP 218
Query: 515 A**DRLQXXXXXXXXXFALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQ 694
A**D L FALLCVPKEHNS+IS S+LL TS SCSG VHKV *DV DV++
Sbjct: 219 A**DTLCRG*PAGSCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVE 398
Score = 143 bits (307), Expect = 1e-033
Identities = 70/118 (59%), Positives = 79/118 (66%)
Frame = -3 / -2
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGC 508
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 391 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGY 212
Query: 507 GSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHYLAFQE*KI*CDDSSGQ*ST* 334
G+ LA S+SFQH TC++ +SLDGR Q GH Q *K C DSS Q S *
Sbjct: 211 GNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGHCQEIQA*KTLCGDSSEQQSV* 38
Score = 105 bits (223), Expect = 6e-022
Identities = 57/104 (54%), Positives = 60/104 (57%)
Frame = +1 / +2
Query: 328 PSSR*LLPRRIITLNFSFLESQIMSHQELWWTTKSAIQRTSISTCVRMLE*SGLRGQLTT 507
P *LL RRI T +FS L+ MS L SAIQ TC MLE* G +GQ T
Sbjct: 32 PQLH*LLLRRITTQSFSCLDLLTMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHIT 211
Query: 508 TSCMMR*ASVLMICRSWCIRSLMCTKGAQQPYQSLLPSATHIWQ 639
SCMMR M CR CIRSLMCTKGAQQ YQ L SA HI Q
Sbjct: 212 ISCMMRYTLPRMTCRILCIRSLMCTKGAQQQYQLFLQSAMHILQ 343
Score = 55.6 bits (115), Expect(2) = 4e-080
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / +1
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 433 PVQELPRLHEKVRSSMFFC*ALVAL 507
Score = 51.0 bits (105), Expect(2) = 6e-054
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / -1
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 518 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 405
Score = 34.5 bits (69), Expect(2) = 7e-045
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / -3
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 492 SAEEHAAADFLMETRQLLHRAAGSRGV 412
>gb|CB876456.1|CB876456 HX11F07w HX Hordeum vulgare subsp. vulgare cDNA clone HX11F07
3-PRIME, mRNA sequence
Length = 641
Score = 263 bits (569), Expect(2) = 4e-080
Identities = 102/114 (89%), Positives = 109/114 (95%)
Frame = +3 / -2
Query: 336 TLIIAQKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHIL 515
TLI+AQKNHHTKFF+PG PDNVPPGTVVDN VCHP+N+DFYMCAHAGMIGTTRPTHYHIL
Sbjct: 640 TLIVAQKNHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHIL 461
Query: 516 HDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
HDEI F+ DDLQ+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 460 HDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 299
Score = 179 bits (385), Expect(2) = 2e-053
Identities = 71/116 (61%), Positives = 94/116 (81%)
Frame = -1 / +2
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDV 507
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD+
Sbjct: 290 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQDM 469
Query: 506 VVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSVMILLGNNQ 339
V+ WP P+HSSM HV++ + WMAD ++++S+ DI+ SR+EK V+ILL NNQ
Sbjct: 470 VMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIVRRSRHEKLCVVILLSNNQ 637
Score = 166 bits (358), Expect(2) = 7e-045
Identities = 82/123 (66%), Positives = 87/123 (70%)
Frame = -2 / +3
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L+DVSDISSNFMN T *Q+G TTD+AVVLLWY S K I
Sbjct: 273 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 452
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FFWAI 344
SSCR+W* VGLVVPIIPA AHM*KS F GWQT LSTTVPGGTLSG PGMKN V *FF A
Sbjct: 453 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMKNFVW*FF*AT 632
Query: 343 INV 335
I+V
Sbjct: 633 ISV 641
Score = 147 bits (315), Expect = 1e-034
Identities = 69/120 (57%), Positives = 82/120 (68%)
Frame = +2 / -1
Query: 335 HVDYCPEESSH*IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLPHP 514
H D C EES H +FH+W + CP+ +C LPSKEL LHV +CWND D +AN+LP+P
Sbjct: 641 HTDCCSEESPHKVFHAWIS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYP 462
Query: 515 A**DRLQXXXXXXXXXFALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQ 694
A**D L FALLCVPKEHNS+IS S+LL TS SCSG VHKV *DV DV++
Sbjct: 461 A**DTLCRG*PAGSCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVE 282
Score = 143 bits (306), Expect = 2e-033
Identities = 68/114 (59%), Positives = 77/114 (67%)
Frame = -3 / +1
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGC 508
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 289 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGY 468
Query: 507 GSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHYLAFQE*KI*CDDSSGQ 346
G+ LA S+SFQH TC++ +SLDGR Q GH Q *K C DSS Q
Sbjct: 469 GNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGHCQEIQA*KTLCGDSSEQ 630
Score = 102 bits (218), Expect = 3e-021
Identities = 56/100 (56%), Positives = 59/100 (59%)
Frame = +1 / -3
Query: 340 *LLPRRIITLNFSFLESQIMSHQELWWTTKSAIQRTSISTCVRMLE*SGLRGQLTTTSCM 519
*LL RRI T +FS L+ MS L SAIQ TC MLE* G +GQ T SCM
Sbjct: 636 *LLLRRITTQSFSCLDLLTMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCM 457
Query: 520 MR*ASVLMICRSWCIRSLMCTKGAQQPYQSLLPSATHIWQ 639
MR M CR CIRSLMCTKGAQQ YQ L SA HI Q
Sbjct: 456 MRYTLPRMTCRILCIRSLMCTKGAQQQYQLFLQSAMHILQ 337
Score = 55.6 bits (115), Expect(2) = 4e-080
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -2
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 247 PVQELPRLHEKVRSSMFFC*ALVAL 173
Score = 51.0 bits (105), Expect(2) = 2e-053
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +3
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 162 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 275
Score = 34.5 bits (69), Expect(2) = 7e-045
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / +2
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 188 SAEEHAAADFLMETRQLLHRAAGSRGV 268
>gb|AV917119.1|AV917119 AV917119 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20n15 5', mRNA sequence
Length = 593
Score = 295 bits (639), Expect = 2e-079
Identities = 117/144 (81%), Positives = 125/144 (86%)
Frame = +3 / +1
Query: 3 SPGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLID 182
SPG REWPL+SKYRASVR+QSPK+EMIDSLFKP+ EDDGL+RECLID
Sbjct: 160 SPGQSDIPSIAAVVGSREWPLVSKYRASVRSQSPKLEMIDSLFKPQGTEDDGLVRECLID 339
Query: 183 FYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNH 362
FYTSSGKRKPDQ+IIFRDGVSESQFNQVLNIEL QIIEACKFLDE WNPKFTLI+AQKNH
Sbjct: 340 FYTSSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDENWNPKFTLIVAQKNH 519
Query: 363 HTKFFIPGKPDNVPPGTVVDNKVC 434
HTKFF+PG PDNVPPGTVVDN VC
Sbjct: 520 HTKFFMPGSPDNVPPGTVVDNAVC 591
Score = 182 bits (393), Expect = 2e-045
Identities = 80/143 (55%), Positives = 106/143 (74%)
Frame = -1 / -3
Query: 434 ADFVVHHSSWWDIIWLSRNEKFSVMILLGNNQRELGIPFLIKKFASLDDLLQLNVQHLIK 255
AD ++++S+ DI+ SR+EK V+ILL NNQ ELG+P I++ A L++L+ +VQHLIK
Sbjct: 591 ADSIINNSARRDIVRRSRHEKLCVVILLSNNQCELGVPIFIQELAGLNNLI*FDVQHLIK 412
Query: 254 LTFANTVPEYDNLVRLSLPRTGVEVNQTLPDQTIIFSFPWLKQ*VNHFHFW*LGADRCSV 75
L ANT+PE D+L+ SL RTGVEVN+TLP++ IIFS WL+Q*+ HF W*L A +
Sbjct: 411 LALANTIPEDDDLIWFSLSRTGVEVNETLPNKAIIFSSLWLEQ*IYHF*LW*LRAH*SPI 232
Query: 74 FRDKRPFTRTNNSSNRRYIRMSR 6
FRDK PF+RTNN N YIR+SR
Sbjct: 231 FRDKGPFSRTNNCCNGWYIRLSR 163
Score = 134 bits (288), Expect = 6e-031
Identities = 63/120 (52%), Positives = 80/120 (66%)
Frame = +2 / +3
Query: 56 MASYLEIQSICPHPITKNGND*LIV*ATGS*R*WSDPGVSD*LLHQFWEEKA*PSYHIQG 235
MA LEI +TK ND IV AT +*R*W GVS *LLHQFW+EK +H+QG
Sbjct: 213 MAPCLEI*GFSALAVTKARNDRFIVQATRN*R*WPCSGVSH*LLHQFWKEKTRSDHHLQG 392
Query: 236 RC*RKSV*SGAEH*VATNHRGLQIS**EMESQVHVDYCPEESSH*IFHSWKAR*CPTRNC 415
C*R+ V*SGAEH + +N+ GLQ+ *++E QVH D C EES H +FH+W + CP+ +C
Sbjct: 393 WC*REPV*SGAEHRIRSNY*GLQVLG*KLEPQVHTDCCSEESPHKVFHAWIS*QCPSWHC 572
Score = 119 bits (254), Expect = 3e-026
Identities = 67/127 (52%), Positives = 71/127 (55%)
Frame = -3 / -2
Query: 435 GRLCCPPQFLVGHYLAFQE*KI*CDDSSGQ*ST*TWDSISHQEICKPR*FVATQCSAPD* 256
GR Q GH Q *K C DSS Q S *TW S H C+P+*F +CSAPD*
Sbjct: 592 GRQHYQQQCQEGHCQEIQA*KTLCGDSSEQQSV*TWGSNFHPRTCRPQ*FDLIRCSAPD* 413
Query: 255 TDFR*HRP*I**LGQAFSSQNWCRSQSDTPGSDHHLQLPVA*TMSQSFPFLVIGCGQMLC 76
T R*H P* ** FS QNWCRSQ DTP HHLQ VA*TM+ SF LV
Sbjct: 412 TGSR*HHP*R**SDLVFSFQNWCRSQ*DTPEQGHHLQFLVA*TMNLSFLALVTASALKPY 233
Query: 75 ISR*EAI 55
ISR AI
Sbjct: 232 ISRQGAI 212
Score = 105 bits (225), Expect = 3e-022
Identities = 61/112 (54%), Positives = 71/112 (63%)
Frame = +1 / +2
Query: 67 SRNTEHLSAPNHQKWK*LTHCLSHGKLKMMV*SGSV*LTSTPVLGRESLTKLSYSGTVLA 246
SRN A +HQ K* HC SH +LKMM GSV LTSTPVL RE+ + S SG VLA
Sbjct: 224 SRNIGLQCARSHQS*K**IHCSSHKELKMMALFGSVSLTSTPVLERENQIRSSSSGMVLA 403
Query: 247 KVSLIRC*TLSCNKSSRLANFLMRNGIPSSR*LLPRRIITLNFSFLESQIMS 402
+ SLIRC*T + K R A+ M+ G PSS *LL RRI T +FS L+ MS
Sbjct: 404 RASLIRC*TSN*IKLLRPASSWMKIGTPSSH*LLLRRITTQSFSCLDLLTMS 559
Score = 105 bits (224), Expect(2) = 2e-043
Identities = 47/71 (66%), Positives = 49/71 (69%)
Frame = -2 / -1
Query: 214 SGFLFPELV*KXXXXXXXXXXXXXXRGLNNESIISIFGDWVRTDALYFEIRGHSRELTTA 35
SGFLFPELV*K GLNNESIIS FGD RT+ALYFE RGHSRE TTA
Sbjct: 371 SGFLFPELV*KSMRHSRTRPSSSVPCGLNNESIISSFGDCERTEALYFETRGHSREPTTA 192
Query: 34 ATDGTSECPGD 2
A DG S+CPGD
Sbjct: 191 AMDGISDCPGD 159
Score = 91.3 bits (193), Expect(2) = 2e-043
Identities = 40/50 (80%), Positives = 43/50 (86%)
Frame = -2 / -1
Query: 436 WQTLLSTTVPGGTLSGFPGMKNLV**FFWAIINVNLGFHFSSRNLQASMI 287
WQT LSTTVPGGTLSG PGMKN V *FF A I+VNLGF FSS+NLQAS+I
Sbjct: 593 WQTALSTTVPGGTLSGDPGMKNFVW*FF*ATISVNLGFQFSSKNLQASII 444
>gb|BU969384.1|BU969384 HB11G01r BC Hordeum vulgare subsp. vulgare cDNA clone HB11G01
5-PRIME, mRNA sequence
Length = 548
Score = 257 bits (556), Expect(2) = 2e-078
Identities = 99/111 (89%), Positives = 106/111 (95%)
Frame = +3 / +3
Query: 345 IAQKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDE 524
+AQKNHHTKFF+PG PDNVPPGTVVDN VCHP+N+DFYMCAHAGMIGTTRPTHYHILHDE
Sbjct: 12 VAQKNHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDE 191
Query: 525 IGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
I F+ DDLQ+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 192 IHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 344
Score = 174 bits (374), Expect(2) = 5e-052
Identities = 69/114 (60%), Positives = 92/114 (80%)
Frame = -1 / -1
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDV 507
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD+
Sbjct: 353 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQDM 174
Query: 506 VVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEKFSVMILLGN 345
V+ WP P+HSSM HV++ + WMAD ++++S+ DI+ SR+EK V+ILL N
Sbjct: 173 VMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIVRRSRHEKLCVVILLSN 12
Score = 163 bits (350), Expect(2) = 8e-044
Identities = 79/117 (67%), Positives = 83/117 (70%)
Frame = -2 / -2
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L+DVSDISSNFMN T *Q+G TTD+AVVLLWY S K I
Sbjct: 370 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 191
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV**FF 353
SSCR+W* VGLVVPIIPA AHM*KS F GWQT LSTTVPGGTLSG PGMKN V *FF
Sbjct: 190 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMKNFVW*FF 20
Score = 143 bits (306), Expect = 2e-033
Identities = 68/114 (59%), Positives = 77/114 (67%)
Frame = -3 / -3
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGC 508
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 354 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGY 175
Query: 507 GSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHYLAFQE*KI*CDDSSGQ 346
G+ LA S+SFQH TC++ +SLDGR Q GH Q *K C DSS Q
Sbjct: 174 GNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGHCQEIQA*KTLCGDSSEQ 13
Score = 141 bits (303), Expect = 5e-033
Identities = 67/116 (57%), Positives = 80/116 (68%)
Frame = +2 / +2
Query: 347 CPEESSH*IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLPHPA**D 526
C EES H +FH+W + CP+ +C LPSKEL LHV +CWND D +AN+LP+PA**D
Sbjct: 14 CSEESPHKVFHAWIS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA**D 193
Query: 527 RLQXXXXXXXXXFALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQ 694
L FALLCVPKEHNS+IS S+LL TS SCSG VHKV *DV DV++
Sbjct: 194 TLCRG*PAGSCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVE 361
Score = 100 bits (214), Expect = 1e-020
Identities = 54/99 (54%), Positives = 58/99 (58%)
Frame = +1 / +1
Query: 343 LLPRRIITLNFSFLESQIMSHQELWWTTKSAIQRTSISTCVRMLE*SGLRGQLTTTSCMM 522
+L RRI T +FS L+ MS L SAIQ TC MLE* G +GQ T SCMM
Sbjct: 10 VLLRRITTQSFSCLDLLTMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCMM 189
Query: 523 R*ASVLMICRSWCIRSLMCTKGAQQPYQSLLPSATHIWQ 639
R M CR CIRSLMCTKGAQQ YQ L SA HI Q
Sbjct: 190 RYTLPRMTCRILCIRSLMCTKGAQQQYQLFLQSAMHILQ 306
Score = 55.6 bits (115), Expect(2) = 2e-078
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / +3
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 396 PVQELPRLHEKVRSSMFFC*ALVAL 470
Score = 51.0 bits (105), Expect(2) = 5e-052
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / -2
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 481 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 368
Score = 34.5 bits (69), Expect(2) = 8e-044
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / -1
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 455 SAEEHAAADFLMETRQLLHRAAGSRGV 375
>gb|BG343570.1|BG343570 HVSMEg0006G18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006G18f, mRNA sequence
Length = 1070
Score = 229 bits (494), Expect(3) = 6e-075
Identities = 94/119 (78%), Positives = 100/119 (84%)
Frame = +3 / +1
Query: 3 SPGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLID 182
SPG REWPL+SKYRASVR+QSPK+EMIDSLFKP+ EDDGL+RECLID
Sbjct: 292 SPGQSDIPSIAAVVGSREWPLVSKYRASVRSQSPKLEMIDSLFKPQGTEDDGLVRECLID 471
Query: 183 FYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKN 359
FYTSSGKRKPDQ IIFRDGVSESQFNQVLNIEL QIIEACK LDE WNPKFTLI+AQKN
Sbjct: 472 FYTSSGKRKPDQNIIFRDGVSESQFNQVLNIELDQIIEACKVLDENWNPKFTLIVAQKN 648
Score = 161 bits (346), Expect(4) = 8e-056
Identities = 71/118 (60%), Positives = 87/118 (73%)
Frame = -1 / -3
Query: 359 ILLGNNQRELGIPFLIKKFASLDDLLQLNVQHLIKLTFANTVPEYDNLVRLSLPRTGVEV 180
ILL NNQ ELG+P I+ FA L++L+ +VQHLIKL ANT+PE D L+ SL RTGVEV
Sbjct: 648 ILLSNNQCELGVPIFIQDFAGLNNLI*FDVQHLIKLALANTIPEDDILIWFSLSRTGVEV 469
Query: 179 NQTLPDQTIIFSFPWLKQ*VNHFHFW*LGADRCSVFRDKRPFTRTNNSSNRRYIRMSR 6
N+TLP++ IIFS WL+Q*+ HF W*L A +FRDK PF+RTNN N YIR+SR
Sbjct: 468 NETLPNKAIIFSSLWLEQ*IYHF*LW*LRAH*SPIFRDKGPFSRTNNCCNGWYIRLSR 295
Score = 111 bits (238), Expect(3) = 4e-031
Identities = 56/101 (55%), Positives = 66/101 (65%)
Frame = +2 / +3
Query: 56 MASYLEIQSICPHPITKNGND*LIV*ATGS*R*WSDPGVSD*LLHQFWEEKA*PSYHIQG 235
MA LEI +TK ND IV AT +*R*W GVS *LLHQFW+EK YH+QG
Sbjct: 345 MAPCLEI*GFSALAVTKARNDRFIVQATRN*R*WPCSGVSH*LLHQFWKEKTRSEYHLQG 524
Query: 236 RC*RKSV*SGAEH*VATNHRGLQIS**EMESQVHVDYCPEE 358
C*R+ V*SGAEH + +N+ GLQ *++E QVH D C EE
Sbjct: 525 WC*REPV*SGAEHRIRSNY*GLQSLG*KLEPQVHTDCCSEE 647
Score = 105 bits (224), Expect(3) = 1e-032
Identities = 47/71 (66%), Positives = 49/71 (69%)
Frame = -2 / -1
Query: 214 SGFLFPELV*KXXXXXXXXXXXXXXRGLNNESIISIFGDWVRTDALYFEIRGHSRELTTA 35
SGFLFPELV*K GLNNESIIS FGD RT+ALYFE RGHSRE TTA
Sbjct: 503 SGFLFPELV*KSMRHSRTRPSSSVPCGLNNESIISSFGDCERTEALYFETRGHSREPTTA 324
Query: 34 ATDGTSECPGD 2
A DG S+CPGD
Sbjct: 323 AMDGISDCPGD 291
Score = 105 bits (223), Expect = 6e-022
Identities = 56/101 (55%), Positives = 61/101 (60%)
Frame = -3 / -2
Query: 357 SSGQ*ST*TWDSISHQEICKPR*FVATQCSAPD*TDFR*HRP*I**LGQAFSSQNWCRSQ 178
SS Q S *TW S H +C+P+*F +CSAPD*T R*H P* * FS QNWCRSQ
Sbjct: 646 SSEQQSV*TWGSNFHPRLCRPQ*FDLIRCSAPD*TGSR*HHP*R*YSDLVFSFQNWCRSQ 467
Query: 177 SDTPGSDHHLQLPVA*TMSQSFPFLVIGCGQMLCISR*EAI 55
DTP HHLQ VA*TM+ SF LV ISR AI
Sbjct: 466 *DTPEQGHHLQFLVA*TMNLSFLALVTASALKPYISRQGAI 344
Score = 59.7 bits (124), Expect(3) = 6e-075
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +3 / +1
Query: 492 RPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVA 614
R THYH LHDE + DDLQ+L HSLSYVY RS VV+
Sbjct: 778 RATHYHXLHDENTLAADDLQDLGHSLSYVYXRSQQPYQVVS 900
Score = 44.6 bits (91), Expect(4) = 8e-056
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = -2 / -2
Query: 487 VPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV 365
VPII + + F GWQT LSTTV GT PGMKN V
Sbjct: 775 VPIISSMSAHVXVIFPGWQTALSTTVQXGTCQXDPGMKNXV 653
Score = 42.8 bits (87), Expect(4) = 8e-056
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = -1 / -3
Query: 590 APLVHIRERMHQLLQIIRTEAYLIMQDVVVSWPRSP 483
AP VHIRE M ++LQ+I + LIMQ +V+ P SP
Sbjct: 876 APXVHIREGMPKILQVIGGKCILIMQXMVMCGPVSP 769
Score = 39.6 bits (80), Expect(3) = 1e-032
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -2 / -1
Query: 358 FFWAIINVNLGFHFSSRNLQASMI 287
FF A I+VNLGF FSS+ LQAS+I
Sbjct: 647 FF*ATISVNLGFQFSSKTLQASII 576
Score = 38.6 bits (78), Expect(3) = 1e-032
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -3 / -2
Query: 588 SFGTHKRANAPAPADHQD*SLSHHAGCGS 502
S GTHKR NA PA H+ SHHA G+
Sbjct: 874 SXGTHKRGNAQDPASHRRQVYSHHAXYGN 788
Score = 33.1 bits (66), Expect(3) = 4e-031
Identities = 18/36 (50%), Positives = 18/36 (50%)
Frame = +1 / +2
Query: 484 GLRGQLTTTSCMMR*ASVLMICRSWCIRSLMCTKGA 591
G G T CMMR M CR I SLMCT GA
Sbjct: 770 GDTGPHITIXCMMRIHLPPMTCRILGIPSLMCTXGA 877
Score = 31.8 bits (63), Expect(3) = 6e-075
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3 / +2
Query: 441 KNFDFYMCAHAGMIGTTRP 497
+ +D YMCAHAG G T P
Sbjct: 728 RKYDXYMCAHAGNDGDTGP 784
Score = 28.1 bits (55), Expect(3) = 4e-031
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +2 / +2
Query: 365 H*IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRD 487
H +FH+W CP +C LPS++ ND D
Sbjct: 653 HXVFHAWIXLTCPXLHCC**CCLPSRKYDXYMCAHAGNDGD 775
Score = 25.8 bits (50), Expect(4) = 8e-056
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -1 / -3
Query: 743 RQLLDRNAARRSMPAMTGGRLRHLIELYELANLSSCQM 630
R+ L AR+ + R +L++LYE+ L+SC++
Sbjct: 1026 REQLCPAVARKCVQQPVRXRSGNLLKLYEMRPLNSCKV 913
>gb|BU971417.1|BU971417 HB17I20r BC Hordeum vulgare subsp. vulgare cDNA clone HB17I20
5-PRIME, mRNA sequence
Length = 502
Score = 237 bits (512), Expect(2) = 3e-072
Identities = 92/103 (89%), Positives = 98/103 (95%)
Frame = +3 / +2
Query: 369 KFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDL 548
KFF+PG PDNVPPGTVVDN VCHP+N+DFYMCAHAGMIGTTRPTHYHILHDEI F+ DDL
Sbjct: 11 KFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDL 190
Query: 549 QELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
Q+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 191 QDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 319
Score = 164 bits (352), Expect(2) = 5e-049
Identities = 64/105 (60%), Positives = 86/105 (81%)
Frame = -1 / -1
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDV 507
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD+
Sbjct: 328 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQDM 149
Query: 506 VVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEK 372
V+ WP P+HSSM HV++ + WMAD ++++S+ DI+ SR+EK
Sbjct: 148 VMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIVRRSRHEK 14
Score = 157 bits (338), Expect(2) = 4e-042
Identities = 75/113 (66%), Positives = 80/113 (70%)
Frame = -2 / -2
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L+DVSDISSNFMN T *Q+G TTD+AVVLLWY S K I
Sbjct: 345 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 166
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKNLV 365
SSCR+W* VGLVVPIIPA AHM*KS F GWQT LSTTVPGGTLSG PGMKN +
Sbjct: 165 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMKNFL 7
Score = 133 bits (286), Expect = 1e-030
Identities = 63/105 (60%), Positives = 72/105 (68%)
Frame = -3 / -3
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGC 508
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 329 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGY 150
Query: 507 GSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHYLAFQE*K 373
G+ LA S+SFQH TC++ +SLDGR Q GH Q *K
Sbjct: 149 GNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGHCQEIQA*K 15
Score = 130 bits (278), Expect = 1e-029
Identities = 62/108 (57%), Positives = 75/108 (69%)
Frame = +2 / +1
Query: 371 IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLPHPA**DRLQXXXXX 550
+FH+W + CP+ +C LPSKEL LHV +CWND D +AN+LP+PA**D L
Sbjct: 13 VFHAWIS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PA 192
Query: 551 XXXXFALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQ 694
FALLCVPKEHNS+IS S+LL TS SCSG VHKV *DV DV++
Sbjct: 193 GSCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVE 336
Score = 55.6 bits (115), Expect(2) = 3e-072
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / +2
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 371 PVQELPRLHEKVRSSMFFC*ALVAL 445
Score = 51.0 bits (105), Expect(2) = 5e-049
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / -2
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 456 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 343
Score = 34.5 bits (69), Expect(2) = 4e-042
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / -1
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 430 SAEEHAAADFLMETRQLLHRAAGSRGV 350
>gb|AV918379.1|AV918379 AV918379 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20n15 3', mRNA sequence
Length = 662
Score = 235 bits (507), Expect(2) = 1e-071
Identities = 91/102 (89%), Positives = 97/102 (95%)
Frame = +3 / -2
Query: 372 FFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQ 551
FF+PG PDNVPPGTVVDN VCHP+N+DFYMCAHAGMIGTTRPTHYHILHDEI F+ DDLQ
Sbjct: 661 FFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQ 482
Query: 552 ELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 481 DLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 356
Score = 164 bits (352), Expect(2) = 5e-049
Identities = 64/105 (60%), Positives = 86/105 (81%)
Frame = -1 / +2
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDV 507
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD+
Sbjct: 347 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQDM 526
Query: 506 VVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNEK 372
V+ WP P+HSSM HV++ + WMAD ++++S+ DI+ SR+EK
Sbjct: 527 VMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIVRRSRHEK 661
Score = 157 bits (337), Expect(2) = 5e-042
Identities = 75/111 (67%), Positives = 79/111 (71%)
Frame = -2 / +3
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L+DVSDISSNFMN T *Q+G TTD+AVVLLWY S K I
Sbjct: 330 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 509
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMKN 371
SSCR+W* VGLVVPIIPA AHM*KS F GWQT LSTTVPGGTLSG PGMKN
Sbjct: 510 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMKN 662
Score = 133 bits (286), Expect = 1e-030
Identities = 63/105 (60%), Positives = 72/105 (68%)
Frame = -3 / +1
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGC 508
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 346 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGY 525
Query: 507 GSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHYLAFQE*K 373
G+ LA S+SFQH TC++ +SLDGR Q GH Q *K
Sbjct: 526 GNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGHCQEIQA*K 660
Score = 130 bits (278), Expect = 1e-029
Identities = 62/108 (57%), Positives = 75/108 (69%)
Frame = +2 / -1
Query: 371 IFHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLPHPA**DRLQXXXXX 550
+FH+W + CP+ +C LPSKEL LHV +CWND D +AN+LP+PA**D L
Sbjct: 662 VFHAWIS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PA 483
Query: 551 XXXXFALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQ 694
FALLCVPKEHNS+IS S+LL TS SCSG VHKV *DV DV++
Sbjct: 482 GSCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVE 339
Score = 55.6 bits (115), Expect(2) = 1e-071
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -2
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 304 PVQELPRLHEKVRSSMFFC*ALVAL 230
Score = 51.0 bits (105), Expect(2) = 5e-049
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +3
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 219 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 332
Score = 34.5 bits (69), Expect(2) = 5e-042
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / +2
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 245 SAEEHAAADFLMETRQLLHRAAGSRGV 325
>gb|BQ462861.1|BQ462861 HI02D22r HI Hordeum vulgare subsp. vulgare cDNA clone HI02D22
5-PRIME, mRNA sequence
Length = 615
Score = 268 bits (580), Expect = 3e-071
Identities = 112/178 (62%), Positives = 133/178 (74%)
Frame = +3 / +1
Query: 267 LNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFFIPGKPDNVPPGTVVDNKVCHPKN 446
+N+E+ QII+A + + + PK T+IIAQKNHHTK F PDNVP GTVVD+ + HPK
Sbjct: 10 VNLEVDQIIKAYQNMGQGPPPKITVIIAQKNHHTKLFQADAPDNVPAGTVVDSGIVHPKQ 189
Query: 447 FDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICY 626
+DFYMCAHAG IGT+RPTHYH+L D+IGF+PD+LQ+LV SLSYVYQRSTTAISVVAPICY
Sbjct: 190 YDFYMCAHAGPIGTSRPTHYHVLLDQIGFTPDELQKLVLSLSYVYQRSTTAISVVAPICY 369
Query: 627 AHLAAAQVGQFIKFDEMXXXXXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC*AVVLL 800
AHLAAAQ+ QFIKF+E V ELPRLH V SSMFFC* +L+
Sbjct: 370 AHLAAAQMSQFIKFEEFADTSSGSGVPSSSTAATVPELPRLHSDVCSSMFFC*RGLLV 543
Score = 139 bits (299), Expect = 2e-032
Identities = 81/158 (51%), Positives = 91/158 (57%)
Frame = -2 / -2
Query: 799 SKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP*LEDVSDISSNFMNWPTXXXXXXX*Q 620
+K+ QQKNIEL T C RGSS T + P ++VS SSNFMNW *Q
Sbjct: 542 TKSPRQQKNIELQTSECSRGSSGTVAAVDDEGTPLPDEVSANSSNFMNWLICAAARCA*Q 363
Query: 619 MGATTDMAVVLLWYXXXXXXXXXXXXSGLKPISSCRMW**VGLVVPIIPACAHM*KSKFF 440
+GATTD+AVVLLWY SG+KPI S + * VGL VPI PA AHM*KS F
Sbjct: 362 IGATTDIAVVLLWYT*ESERTSFWSSSGVKPI*SSKT**WVGLEVPIGPA*AHM*KSYCF 183
Query: 439 GWQTLLSTTVPGGTLSGFPGMKNLV**FFWAIINVNLG 326
G STTVP GTLSG + V *FF AII V G
Sbjct: 182 G*TIPESTTVPAGTLSGASAWNSFVW*FF*AIITVIFG 69
>gb|AV918127.1|AV918127 AV918127 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17p11 3', mRNA sequence
Length = 702
Score = 232 bits (501), Expect(2) = 9e-071
Identities = 90/101 (89%), Positives = 96/101 (95%)
Frame = +3 / -3
Query: 375 FIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQE 554
F+PG PDNVPPGTVVDN VCHP+N+DFYMCAHAGMIGTTRPTHYHILHDEI F+ DDLQ+
Sbjct: 700 FMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQD 521
Query: 555 LVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 520 LVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 398
Score = 161 bits (347), Expect(2) = 3e-048
Identities = 63/104 (60%), Positives = 85/104 (81%)
Frame = -1 / +2
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDV 507
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD+
Sbjct: 389 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQDM 568
Query: 506 VVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDIIWLSRNE 375
V+ WP P+HSSM HV++ + WMAD ++++S+ DI+ SR+E
Sbjct: 569 VMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIVRRSRHE 700
Score = 154 bits (331), Expect(2) = 3e-041
Identities = 74/110 (67%), Positives = 78/110 (70%)
Frame = -2 / +3
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L+DVSDISSNFMN T *Q+G TTD+AVVLLWY S K I
Sbjct: 372 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 551
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLSGFPGMK 374
SSCR+W* VGLVVPIIPA AHM*KS F GWQT LSTTVPGGTLSG PGMK
Sbjct: 552 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMK 701
Score = 133 bits (286), Expect = 1e-030
Identities = 63/105 (60%), Positives = 72/105 (68%)
Frame = -3 / +1
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGC 508
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 388 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGY 567
Query: 507 GSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGHYLAFQE*K 373
G+ LA S+SFQH TC++ +SLDGR Q GH Q *K
Sbjct: 568 GNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGHCQEIQA*K 702
Score = 128 bits (275), Expect = 4e-029
Identities = 62/107 (57%), Positives = 74/107 (69%)
Frame = +2 / -2
Query: 374 FHSWKAR*CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLPHPA**DRLQXXXXXX 553
FH+W + CP+ +C LPSKEL LHV +CWND D +AN+LP+PA**D L
Sbjct: 701 FHAWIS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAG 522
Query: 554 XXXFALLCVPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQ 694
FALLCVPKEHNS+IS S+LL TS SCSG VHKV *DV DV++
Sbjct: 521 SCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVE 381
Score = 55.6 bits (115), Expect(2) = 9e-071
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -3
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 346 PVQELPRLHEKVRSSMFFC*ALVAL 272
Score = 51.0 bits (105), Expect(2) = 3e-048
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +3
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 261 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 374
Score = 34.5 bits (69), Expect(2) = 3e-041
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / +2
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 287 SAEEHAAADFLMETRQLLHRAAGSRGV 367
>gb|CB876294.1|CB876294 HX10N18w HX Hordeum vulgare subsp. vulgare cDNA clone HX10N18
3-PRIME, mRNA sequence
Length = 676
Score = 220 bits (475), Expect(2) = 3e-067
Identities = 86/96 (89%), Positives = 91/96 (94%)
Frame = +3 / -1
Query: 390 PDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSL 569
PDNVPPGTVVDN VCHP+N+DFYMCAHAGMIGTT PTHYHILHDEI F+ DDLQ+LVHSL
Sbjct: 676 PDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTXPTHYHILHDEIHFAADDLQDLVHSL 497
Query: 570 SYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
SYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 496 SYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 389
Score = 153 bits (328), Expect(2) = 1e-045
Identities = 59/98 (60%), Positives = 80/98 (81%)
Frame = -1 / +2
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDV 507
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD+
Sbjct: 380 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQDM 559
Query: 506 VVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDII 393
V+ W P+HSSM HV++ + WMAD ++++S+ DI+
Sbjct: 560 VMCWXCCPNHSSMSAHVKVIIPWMADSIINNSARRDIV 673
Score = 142 bits (305), Expect(2) = 1e-037
Identities = 69/104 (66%), Positives = 73/104 (70%)
Frame = -2 / +3
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L+DVSDISSNFMN T *Q+G TTD+AVVLLWY S K I
Sbjct: 363 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 542
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTLS 392
SSCR+W* VGLVVPIIPA AHM*KS F GWQT LSTTVPGGTLS
Sbjct: 543 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLS 674
Score = 129 bits (277), Expect = 2e-029
Identities = 59/97 (60%), Positives = 68/97 (70%)
Frame = -3 / +1
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGC 508
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 379 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGY 558
Query: 507 GSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGH 397
G+ L S+SFQH TC++ +SLDGR Q GH
Sbjct: 559 GNVLXLLSQSFQHERTCKSHNSLDGRQHYQQQCQEGH 669
Score = 119 bits (255), Expect = 2e-026
Identities = 58/99 (58%), Positives = 68/99 (68%)
Frame = +2 / -3
Query: 398 CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLPHPA**DRLQXXXXXXXXXFALLC 577
CP+ +C LPSKEL LHV +CWND D + N+LP+PA**D L FALLC
Sbjct: 668 CPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKXNTLPYPA**DTLCRG*PAGSCAFALLC 489
Query: 578 VPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQ 694
VPKEHNS+IS S+LL TS SCSG VHKV *DV DV++
Sbjct: 488 VPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVE 372
Score = 55.6 bits (115), Expect(2) = 3e-067
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -1
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 337 PVQELPRLHEKVRSSMFFC*ALVAL 263
Score = 51.0 bits (105), Expect(2) = 1e-045
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +3
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 252 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 365
Score = 34.5 bits (69), Expect(2) = 1e-037
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / +2
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 278 SAEEHAAADFLMETRQLLHRAAGSRGV 358
>gb|CB875735.1|CB875735 HX09D06w HX Hordeum vulgare subsp. vulgare cDNA clone HX09D06
3-PRIME, mRNA sequence
Length = 674
Score = 220 bits (474), Expect(2) = 4e-067
Identities = 86/95 (90%), Positives = 91/95 (95%)
Frame = +3 / -1
Query: 393 DNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLS 572
DNVPPGTVVDN VCHP+N+DFYMCAHAGMIGTTRPTHYHILHDEI F+ DDLQ+LVHSLS
Sbjct: 674 DNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLS 495
Query: 573 YVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
YVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 494 YVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 390
Score = 157 bits (337), Expect(2) = 6e-047
Identities = 60/98 (61%), Positives = 81/98 (82%)
Frame = -1 / +3
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDV 507
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD+
Sbjct: 381 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQDM 560
Query: 506 VVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDII 393
V+ WP P+HSSM HV++ + WMAD ++++S+ DI+
Sbjct: 561 VMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIV 674
Score = 140 bits (301), Expect(2) = 4e-037
Identities = 68/103 (66%), Positives = 72/103 (69%)
Frame = -2 / +1
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L+DVSDISSNFMN T *Q+G TTD+AVVLLWY S K I
Sbjct: 364 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 543
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTL 395
SSCR+W* VGLVVPIIPA AHM*KS F GWQT LSTTVPGGTL
Sbjct: 544 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTL 672
Score = 131 bits (281), Expect = 6e-030
Identities = 60/97 (61%), Positives = 69/97 (71%)
Frame = -3 / +2
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGC 508
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 380 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGY 559
Query: 507 GSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGH 397
G+ LA S+SFQH TC++ +SLDGR Q GH
Sbjct: 560 GNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGH 670
Score = 121 bits (259), Expect = 6e-027
Identities = 59/99 (59%), Positives = 69/99 (69%)
Frame = +2 / -3
Query: 398 CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLPHPA**DRLQXXXXXXXXXFALLC 577
CP+ +C LPSKEL LHV +CWND D +AN+LP+PA**D L FALLC
Sbjct: 669 CPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLC 490
Query: 578 VPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQ 694
VPKEHNS+IS S+LL TS SCSG VHKV *DV DV++
Sbjct: 489 VPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVE 373
Score = 55.6 bits (115), Expect(2) = 4e-067
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -1
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 338 PVQELPRLHEKVRSSMFFC*ALVAL 264
Score = 51.0 bits (105), Expect(2) = 6e-047
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +1
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 253 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 366
Score = 34.5 bits (69), Expect(2) = 4e-037
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / +3
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 279 SAEEHAAADFLMETRQLLHRAAGSRGV 359
>gb|CB874380.1|CB874380 HX05B15w HX Hordeum vulgare subsp. vulgare cDNA clone HX05B15
3-PRIME, mRNA sequence
Length = 626
Score = 220 bits (474), Expect(2) = 4e-067
Identities = 86/95 (90%), Positives = 91/95 (95%)
Frame = +3 / -1
Query: 393 DNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLS 572
DNVPPGTVVDN VCHP+N+DFYMCAHAGMIGTTRPTHYHILHDEI F+ DDLQ+LVHSLS
Sbjct: 626 DNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLS 447
Query: 573 YVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
YVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 446 YVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 342
Score = 157 bits (337), Expect(2) = 6e-047
Identities = 60/98 (61%), Positives = 81/98 (82%)
Frame = -1 / +3
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDV 507
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD+
Sbjct: 333 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQDM 512
Query: 506 VVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDII 393
V+ WP P+HSSM HV++ + WMAD ++++S+ DI+
Sbjct: 513 VMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIV 626
Score = 140 bits (301), Expect(2) = 4e-037
Identities = 68/103 (66%), Positives = 72/103 (69%)
Frame = -2 / +1
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L+DVSDISSNFMN T *Q+G TTD+AVVLLWY S K I
Sbjct: 316 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 495
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTL 395
SSCR+W* VGLVVPIIPA AHM*KS F GWQT LSTTVPGGTL
Sbjct: 496 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTL 624
Score = 131 bits (281), Expect = 6e-030
Identities = 60/97 (61%), Positives = 69/97 (71%)
Frame = -3 / +2
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGC 508
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 332 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGY 511
Query: 507 GSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGH 397
G+ LA S+SFQH TC++ +SLDGR Q GH
Sbjct: 512 GNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGH 622
Score = 121 bits (259), Expect = 6e-027
Identities = 59/99 (59%), Positives = 69/99 (69%)
Frame = +2 / -3
Query: 398 CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLPHPA**DRLQXXXXXXXXXFALLC 577
CP+ +C LPSKEL LHV +CWND D +AN+LP+PA**D L FALLC
Sbjct: 621 CPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLC 442
Query: 578 VPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQ 694
VPKEHNS+IS S+LL TS SCSG VHKV *DV DV++
Sbjct: 441 VPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVE 325
Score = 55.6 bits (115), Expect(2) = 4e-067
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -1
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 290 PVQELPRLHEKVRSSMFFC*ALVAL 216
Score = 51.0 bits (105), Expect(2) = 6e-047
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +1
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 205 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 318
Score = 34.5 bits (69), Expect(2) = 4e-037
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / +3
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 231 SAEEHAAADFLMETRQLLHRAAGSRGV 311
>gb|CB875995.1|CB875995 HX09P10w HX Hordeum vulgare subsp. vulgare cDNA clone HX09P10
3-PRIME, mRNA sequence
Length = 626
Score = 220 bits (474), Expect(2) = 4e-067
Identities = 86/95 (90%), Positives = 91/95 (95%)
Frame = +3 / -1
Query: 393 DNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLS 572
DNVPPGTVVDN VCHP+N+DFYMCAHAGMIGTTRPTHYHILHDEI F+ DDLQ+LVHSLS
Sbjct: 626 DNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLS 447
Query: 573 YVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
YVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 446 YVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 342
Score = 157 bits (337), Expect(2) = 6e-047
Identities = 60/98 (61%), Positives = 81/98 (82%)
Frame = -1 / +3
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDV 507
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD+
Sbjct: 333 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQDM 512
Query: 506 VVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSSWWDII 393
V+ WP P+HSSM HV++ + WMAD ++++S+ DI+
Sbjct: 513 VMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIV 626
Score = 140 bits (301), Expect(2) = 4e-037
Identities = 68/103 (66%), Positives = 72/103 (69%)
Frame = -2 / +1
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L+DVSDISSNFMN T *Q+G TTD+AVVLLWY S K I
Sbjct: 316 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 495
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPGGTL 395
SSCR+W* VGLVVPIIPA AHM*KS F GWQT LSTTVPGGTL
Sbjct: 496 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTL 624
Score = 131 bits (281), Expect = 6e-030
Identities = 60/97 (61%), Positives = 69/97 (71%)
Frame = -3 / +2
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGC 508
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 332 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGY 511
Query: 507 GSELAS*SRSFQHAHTCRNRSSLDGRLCCPPQFLVGH 397
G+ LA S+SFQH TC++ +SLDGR Q GH
Sbjct: 512 GNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGH 622
Score = 121 bits (259), Expect = 6e-027
Identities = 59/99 (59%), Positives = 69/99 (69%)
Frame = +2 / -3
Query: 398 CPTRNCGGQQSLPSKELRFLHVCACWNDRDYEANSLPHPA**DRLQXXXXXXXXXFALLC 577
CP+ +C LPSKEL LHV +CWND D +AN+LP+PA**D L FALLC
Sbjct: 621 CPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLC 442
Query: 578 VPKEHNSHISRCSHLLRTSGSCSGWPVHKVR*DVGDVLQ 694
VPKEHNS+IS S+LL TS SCSG VHKV *DV DV++
Sbjct: 441 VPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVE 325
Score = 55.6 bits (115), Expect(2) = 4e-067
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -1
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 290 PVQELPRLHEKVRSSMFFC*ALVAL 216
Score = 51.0 bits (105), Expect(2) = 6e-047
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +1
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 205 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 318
Score = 34.5 bits (69), Expect(2) = 4e-037
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / +3
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 231 SAEEHAAADFLMETRQLLHRAAGSRGV 311
>gb|AV918025.1|AV918025 AV918025 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17h21 3', mRNA sequence
Length = 653
Score = 209 bits (451), Expect(2) = 6e-064
Identities = 82/91 (90%), Positives = 87/91 (95%)
Frame = +3 / -2
Query: 405 PGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQ 584
PGTVVDN VCHP+N+DFYMCAHAGMIGTTRPTHYHILHDEI F+ DDLQ+LVHSLSYVYQ
Sbjct: 652 PGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSYVYQ 473
Query: 585 RSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
RSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 472 RSTTAISVVSPICYAHLAAAQVAQFIKFDEM 380
Score = 154 bits (330), Expect(2) = 5e-046
Identities = 58/93 (62%), Positives = 78/93 (83%)
Frame = -1 / +2
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDV 507
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD+
Sbjct: 371 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQDM 550
Query: 506 VVSWPRSPDHSSMRTHVEIEVLWMADFVVHHSS 408
V+ WP P+HSSM HV++ + WMAD ++++S+
Sbjct: 551 VMCWPCCPNHSSMSAHVKVIIPWMADSIINNSA 649
Score = 133 bits (286), Expect(2) = 5e-035
Identities = 65/100 (65%), Positives = 69/100 (69%)
Frame = -2 / +3
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L+DVSDISSNFMN T *Q+G TTD+AVVLLWY S K I
Sbjct: 354 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 533
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKFFGWQTLLSTTVPG 404
SSCR+W* VGLVVPIIPA AHM*KS F GWQT LSTTVPG
Sbjct: 534 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPG 653
Score = 129 bits (277), Expect = 2e-029
Identities = 57/86 (66%), Positives = 66/86 (76%)
Frame = -3 / +1
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGC 508
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 370 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGY 549
Query: 507 GSELAS*SRSFQHAHTCRNRSSLDGR 430
G+ LA S+SFQH TC++ +SLDGR
Sbjct: 550 GNVLALLSQSFQHERTCKSHNSLDGR 627
Score = 117 bits (250), Expect = 1e-025
Identities = 56/88 (63%), Positives = 64/88 (72%)
Frame = +2 / -1
Query: 431 LPSKELRFLHVCACWNDRDYEANSLPHPA**DRLQXXXXXXXXXFALLCVPKEHNSHISR 610
LPSKEL LHV +CWND D +AN+LP+PA**D L FALLCVPKEHNS+IS
Sbjct: 626 LPSKEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLCVPKEHNSNISC 447
Query: 611 CSHLLRTSGSCSGWPVHKVR*DVGDVLQ 694
S+LL TS SCSG VHKV *DV DV++
Sbjct: 446 FSNLLCTSCSCSGGAVHKV**DVRDVVE 363
Score = 55.6 bits (115), Expect(2) = 6e-064
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -2
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 328 PVQELPRLHEKVRSSMFFC*ALVAL 254
Score = 51.0 bits (105), Expect(2) = 5e-046
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +3
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 243 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 356
Score = 34.5 bits (69), Expect(2) = 5e-035
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / +2
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 269 SAEEHAAADFLMETRQLLHRAAGSRGV 349
>gb|BU970597.1|BU970597 HB15B24r BC Hordeum vulgare subsp. vulgare cDNA clone HB15B24
5-PRIME, mRNA sequence
Length = 455
Score = 222 bits (480), Expect = 2e-057
Identities = 90/113 (79%), Positives = 96/113 (84%)
Frame = +3 / +3
Query: 3 SPGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLID 182
SPG REWPL+SKYRASVR+QSPK+EMIDSLFKP+ EDDGL+RECLID
Sbjct: 117 SPGQSDIPSIAAVVGSREWPLVSKYRASVRSQSPKLEMIDSLFKPQGTEDDGLVRECLID 296
Query: 183 FYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTL 341
FYTSSGKRKPDQ+IIFRDGVSESQFNQVLNIEL QIIEACKFLDE WNPKFTL
Sbjct: 297 FYTSSGKRKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDENWNPKFTL 455
Score = 150 bits (322), Expect = 1e-035
Identities = 65/112 (58%), Positives = 83/112 (74%)
Frame = -1 / -1
Query: 341 QRELGIPFLIKKFASLDDLLQLNVQHLIKLTFANTVPEYDNLVRLSLPRTGVEVNQTLPD 162
Q ELG+P I++ A L++L+ +VQHLIKL ANT+PE D+L+ SL RTGVEVN+TLP+
Sbjct: 455 QCELGVPIFIQELAGLNNLI*FDVQHLIKLALANTIPEDDDLIWFSLSRTGVEVNETLPN 276
Query: 161 QTIIFSFPWLKQ*VNHFHFW*LGADRCSVFRDKRPFTRTNNSSNRRYIRMSR 6
+ IIFS WL+Q*+ HF W*L A +FRDK PF+RTNN N YIR+SR
Sbjct: 275 KAIIFSSLWLEQ*IYHF*LW*LRAH*SPIFRDKGPFSRTNNCCNGWYIRLSR 120
Score = 105 bits (224), Expect(2) = 7e-027
Identities = 47/71 (66%), Positives = 49/71 (69%)
Frame = -2 / -2
Query: 214 SGFLFPELV*KXXXXXXXXXXXXXXRGLNNESIISIFGDWVRTDALYFEIRGHSRELTTA 35
SGFLFPELV*K GLNNESIIS FGD RT+ALYFE RGHSRE TTA
Sbjct: 328 SGFLFPELV*KSMRHSRTRPSSSVPCGLNNESIISSFGDCERTEALYFETRGHSREPTTA 149
Query: 34 ATDGTSECPGD 2
A DG S+CPGD
Sbjct: 148 AMDGISDCPGD 116
Score = 101 bits (216), Expect = 5e-021
Identities = 51/94 (54%), Positives = 63/94 (67%)
Frame = +2 / +2
Query: 56 MASYLEIQSICPHPITKNGND*LIV*ATGS*R*WSDPGVSD*LLHQFWEEKA*PSYHIQG 235
MA LEI +TK ND IV AT +*R*W GVS *LLHQFW+EK +H+QG
Sbjct: 170 MAPCLEI*GFSALAVTKARNDRFIVQATRN*R*WPCSGVSH*LLHQFWKEKTRSDHHLQG 349
Query: 236 RC*RKSV*SGAEH*VATNHRGLQIS**EMESQVH 337
C*R+ V*SGAEH + +N+ GLQ+ *++E QVH
Sbjct: 350 WC*REPV*SGAEHRIRSNY*GLQVLG*KLEPQVH 451
Score = 100 bits (214), Expect = 1e-020
Identities = 53/94 (56%), Positives = 57/94 (60%)
Frame = -3 / -3
Query: 336 *TWDSISHQEICKPR*FVATQCSAPD*TDFR*HRP*I**LGQAFSSQNWCRSQSDTPGSD 157
*TW S H C+P+*F +CSAPD*T R*H P* ** FS QNWCRSQ DTP
Sbjct: 450 *TWGSNFHPRTCRPQ*FDLIRCSAPD*TGSR*HHP*R**SDLVFSFQNWCRSQ*DTPEQG 271
Query: 156 HHLQLPVA*TMSQSFPFLVIGCGQMLCISR*EAI 55
HHLQ VA*TM+ SF LV ISR AI
Sbjct: 270 HHLQFLVA*TMNLSFLALVTASALKPYISRQGAI 169
Score = 35.4 bits (71), Expect(2) = 7e-027
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -2 / -2
Query: 340 NVNLGFHFSSRNLQASMI 287
+VNLGF FSS+NLQAS+I
Sbjct: 454 SVNLGFQFSSKNLQASII 401
>gb|BQ472674.1|BQ472674 HB01M23r BC Hordeum vulgare subsp. vulgare cDNA clone HB01M23
5-PRIME, mRNA sequence
Length = 581
Score = 179 bits (386), Expect(2) = 5e-055
Identities = 71/79 (89%), Positives = 76/79 (96%)
Frame = +3 / -1
Query: 441 KNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPI 620
+N+DFYMCAHAGMIGTTRPTHYHILHDEI F+ DDLQ+LVHSLSYVYQRSTTAISVV+PI
Sbjct: 581 RNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPI 402
Query: 621 CYAHLAAAQVGQFIKFDEM 677
CYAHLAAAQV QFIKFDEM
Sbjct: 401 CYAHLAAAQVAQFIKFDEM 345
Score = 138 bits (296), Expect(2) = 2e-041
Identities = 53/79 (67%), Positives = 67/79 (84%)
Frame = -1 / +3
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDV 507
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD+
Sbjct: 336 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQDM 515
Query: 506 VVSWPRSPDHSSMRTHVEI 450
V+ WP P+HSSM HV++
Sbjct: 516 VMCWPCCPNHSSMSAHVKV 572
Score = 120 bits (256), Expect(2) = 6e-031
Identities = 53/82 (64%), Positives = 62/82 (75%)
Frame = -3 / +2
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGC 508
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 335 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGY 514
Query: 507 GSELAS*SRSFQHAHTCRNRSS 442
G+ LA S+SFQH TC++ +S
Sbjct: 515 GNVLALLSQSFQHERTCKSHNS 580
Score = 108 bits (230), Expect = 6e-023
Identities = 52/84 (61%), Positives = 60/84 (71%)
Frame = +2 / -3
Query: 443 ELRFLHVCACWNDRDYEANSLPHPA**DRLQXXXXXXXXXFALLCVPKEHNSHISRCSHL 622
EL LHV +CWND D +AN+LP+PA**D L FALLCVPKEHNS+IS S+L
Sbjct: 579 EL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLCVPKEHNSNISCFSNL 400
Query: 623 LRTSGSCSGWPVHKVR*DVGDVLQ 694
L TS SCSG VHKV *DV DV++
Sbjct: 399 LCTSCSCSGGAVHKV**DVRDVVE 328
Score = 105 bits (225), Expect = 3e-022
Identities = 54/87 (62%), Positives = 58/87 (66%)
Frame = -2 / +1
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L+DVSDISSNFMN T *Q+G TTD+AVVLLWY S K I
Sbjct: 319 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 498
Query: 523 SSCRMW**VGLVVPIIPACAHM*KSKF 443
SSCR+W* VGLVVPIIPA AHM*KS F
Sbjct: 499 SSCRIW*CVGLVVPIIPA*AHM*KS*F 579
Score = 55.6 bits (115), Expect(2) = 5e-055
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -1
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 293 PVQELPRLHEKVRSSMFFC*ALVAL 219
Score = 51.0 bits (105), Expect(2) = 2e-041
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +1
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 208 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 321
Score = 34.5 bits (69), Expect(2) = 6e-031
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / +3
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 234 SAEEHAAADFLMETRQLLHRAAGSRGV 314
>gb|AV931339.1|AV931339 AV931339 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19h01 3', mRNA sequence
Length = 607
Score = 169 bits (363), Expect(2) = 7e-052
Identities = 68/74 (91%), Positives = 71/74 (95%)
Frame = +3 / -1
Query: 456 YMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHL 635
YMCAHAGMIGTTRPTHYHILHDEI F+ DDLQ+LVHSLSYVYQRSTTAISVV+PICYAHL
Sbjct: 607 YMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHL 428
Query: 636 AAAQVGQFIKFDEM 677
AAAQV QFIKFDEM
Sbjct: 427 AAAQVAQFIKFDEM 386
Score = 136 bits (292), Expect(2) = 8e-041
Identities = 53/77 (68%), Positives = 65/77 (84%)
Frame = -1 / +2
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDV 507
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD+
Sbjct: 377 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQDM 556
Query: 506 VVSWPRSPDHSSMRTHV 456
V+ WP P+HSSM HV
Sbjct: 557 VMCWPCCPNHSSMSAHV 607
Score = 116 bits (248), Expect(2) = 7e-030
Identities = 52/77 (67%), Positives = 58/77 (75%)
Frame = -3 / +1
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGC 508
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 376 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGY 555
Query: 507 GSELAS*SRSFQHAHTC 457
G+ LA S+SFQH TC
Sbjct: 556 GNVLALLSQSFQHERTC 606
Score = 104 bits (221), Expect = 1e-021
Identities = 49/79 (62%), Positives = 57/79 (72%)
Frame = +2 / -3
Query: 458 HVCACWNDRDYEANSLPHPA**DRLQXXXXXXXXXFALLCVPKEHNSHISRCSHLLRTSG 637
HV +CWND D +AN+LP+PA**D L FALLCVPKEHNS+IS S+LL TS
Sbjct: 605 HVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLCVPKEHNSNISCFSNLLCTSC 426
Query: 638 SCSGWPVHKVR*DVGDVLQ 694
SCSG VHKV *DV DV++
Sbjct: 425 SCSGGAVHKV**DVRDVVE 369
Score = 55.6 bits (115), Expect(2) = 7e-052
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -1
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 334 PVQELPRLHEKVRSSMFFC*ALVAL 260
Score = 51.0 bits (105), Expect(2) = 8e-041
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +3
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 249 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 362
Score = 34.5 bits (69), Expect(2) = 7e-030
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / +2
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 275 SAEEHAAADFLMETRQLLHRAAGSRGV 355
>gb|BM100617.2|BM100617 EBma01_SQ005_L23_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ005_L23 5', mRNA sequence
Length = 670
Score = 137 bits (294), Expect(3) = 1e-049
Identities = 51/85 (60%), Positives = 64/85 (75%)
Frame = +3 / +3
Query: 387 KPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHS 566
K N+ PGTVVD +CHP FDFY+C+HAG+ GT+RPTHYH+L DE GF+ D LQ+L ++
Sbjct: 411 KSGNILPGTVVDTNICHPTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQLTNN 590
Query: 567 LSYVYQRSTTAISVVAPICYAHLAA 641
L Y Y R T ++SVV P YAHLAA
Sbjct: 591 LCYTYARCTRSVSVVPPAYYAHLAA 665
Score = 73.9 bits (155), Expect(3) = 1e-049
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +3 / +3
Query: 207 KPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
KP ++I +RDGVSE QF QVL E+ I +AC L + PK T ++ QK HHT+ F
Sbjct: 213 KPSRIIFYRDGVSEGQFAQVLMYEMDAIRKACASLQADYQPKVTFVVVQKRHHTRLF 383
Score = 24.4 bits (47), Expect(3) = 1e-049
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3 / +3
Query: 156 GLIRECLIDFYTSSG 200
G+IRE L+ FY +G
Sbjct: 165 GMIRELLVSFYKKTG 209
>gb|CA030113.1|CA030113 HX06C02r HX Hordeum vulgare subsp. vulgare cDNA clone HX06C02
5-PRIME, mRNA sequence
Length = 624
Score = 134 bits (287), Expect(2) = 1e-043
Identities = 51/105 (48%), Positives = 72/105 (68%)
Frame = +3 / +3
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N+H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 162 NNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 341
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFD 671
D+LQ L ++L Y Y R T ++S+V P YAHLAA + +++ D
Sbjct: 342 ADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 476
Score = 62.9 bits (131), Expect(2) = 1e-043
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +3 / +3
Query: 231 RDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 12 RDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 158
>gb|BJ451080.1|BJ451080 BJ451080 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak32j21 5', mRNA sequence
Length = 576
Score = 139 bits (299), Expect(2) = 1e-043
Identities = 52/105 (49%), Positives = 73/105 (69%)
Frame = +3 / +1
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
NH+ + + K N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 157 NHNDQRSVDRKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 336
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFD 671
D LQ L ++L Y Y R T ++S+V P YAHLAA + +++ D
Sbjct: 337 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMELD 471
Score = 57.4 bits (119), Expect(2) = 1e-043
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +3 / +1
Query: 237 GVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
GVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 10 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 150
>gb|AV937068.1|AV937068 AV937068 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal9a21 3', mRNA sequence
Length = 587
Score = 135 bits (290), Expect(2) = 7e-042
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +3 / -1
Query: 495 PTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDE 674
PTHYHILHDEI F+ DDLQ+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDE
Sbjct: 587 PTHYHILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDE 408
Query: 675 M 677
M
Sbjct: 407 M 405
Score = 116 bits (249), Expect(2) = 6e-035
Identities = 45/64 (70%), Positives = 56/64 (87%)
Frame = -1 / +3
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDV 507
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD+
Sbjct: 396 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQDM 575
Query: 506 VVSW 495
V+ W
Sbjct: 576 VMCW 587
Score = 98.7 bits (209), Expect(2) = 1e-024
Identities = 44/64 (68%), Positives = 49/64 (76%)
Frame = -3 / +2
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGC 508
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 395 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGY 574
Query: 507 GSEL 496
G+ L
Sbjct: 575 GNVL 586
Score = 55.6 bits (115), Expect(2) = 7e-042
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -1
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 353 PVQELPRLHEKVRSSMFFC*ALVAL 279
Score = 51.0 bits (105), Expect(2) = 6e-035
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +1
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 268 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 381
Score = 34.5 bits (69), Expect(2) = 1e-024
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / +3
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 294 SAEEHAAADFLMETRQLLHRAAGSRGV 374
>gb|BU971142.1|BU971142 HB16L19r BC Hordeum vulgare subsp. vulgare cDNA clone HB16L19
5-PRIME, mRNA sequence
Length = 470
Score = 115 bits (245), Expect(2) = 2e-041
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +3 / +1
Query: 387 KPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHS 566
K N+ PGTVVD +CHP FDFY+C+HAG+ GT+RPTHYH+L DE GF+ D LQ+L ++
Sbjct: 262 KSGNILPGTVVDTNICHPTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQLTNN 441
Query: 567 LSYVYQRST 593
L Y Y R T
Sbjct: 442 LCYTYARCT 468
Score = 74.8 bits (157), Expect(2) = 2e-041
Identities = 31/76 (40%), Positives = 44/76 (57%)
Frame = +3 / +1
Query: 150 DDGLIRECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNP 329
+DG + L+ + KP ++I +RDGVSE QF QVL E+ I +AC L + P
Sbjct: 7 EDGGMMRELLVSFYKKTGYKPSRIIFYRDGVSEGQFAQVLMYEMDAIRKACASLQADYQP 186
Query: 330 KFTLIIAQKNHHTKFF 377
K T ++ QK HHT+ F
Sbjct: 187 KVTFVVVQKRHHTRLF 234
>gb|AV916245.1|AV916245 AV916245 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12e13 5', mRNA sequence
Length = 481
Score = 135 bits (289), Expect(2) = 3e-041
Identities = 50/85 (58%), Positives = 64/85 (75%)
Frame = +3 / +1
Query: 387 KPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHS 566
K N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE FS D++Q L ++
Sbjct: 193 KSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEMQTLTNN 372
Query: 567 LSYVYQRSTTAISVVAPICYAHLAA 641
L Y Y R T ++SVV P YAHLAA
Sbjct: 373 LCYTYARCTRSVSVVPPAYYAHLAA 447
Score = 53.8 bits (111), Expect(2) = 3e-041
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +3 / +2
Query: 237 GVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHT 368
GVSE QF QVL EL I +AC L+ + P T ++ QK HHT
Sbjct: 17 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHT 148
>gb|BE215344.1|BE215344 HV_CEb0006I15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006I15f, mRNA sequence
Length = 679
Score = 104 bits (221), Expect(3) = 5e-041
Identities = 39/82 (47%), Positives = 54/82 (65%)
Frame = +3 / +2
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N+H + N+ PGTVVD+K+CHP FDFY+C HAG+ GT+RP +YH+L DE F+
Sbjct: 338 NNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCNHAGIQGTSRPANYHVLWDENKFT 517
Query: 537 PDDLQELVHSLSYVYQRSTTAI 602
D+LQ L L Y Y + T ++
Sbjct: 518 ADELQTLKKKLCYNYAKGTRSV 583
Score = 72.1 bits (151), Expect(3) = 5e-041
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +3 / +2
Query: 204 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
+KP ++I ++DGVSE QF QVL EL I +AC L+ + P T ++ QK HHT+ F
Sbjct: 161 QKPQRIIFYKDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF 334
Score = 30.4 bits (60), Expect(3) = 5e-041
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +3 / +2
Query: 57 WPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLIDFYTSSGKRKPDQ 218
WP ++KY + Q+ + E+I FK + G + +I S KR Q
Sbjct: 2 WPEVTKYAGLISAQAHRQELIQDPFKVWQDPQRGTVTGGMIKELLISFKRATGQ 163
>gb|CB876232.1|CB876232 HX10K21w HX Hordeum vulgare subsp. vulgare cDNA clone HX10K21
3-PRIME, mRNA sequence
Length = 584
Score = 130 bits (278), Expect(2) = 3e-040
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = +3 / -3
Query: 501 HYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
HYHILHDEI F+ DDLQ+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 582 HYHILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 406
Score = 112 bits (239), Expect(2) = 1e-033
Identities = 44/62 (70%), Positives = 55/62 (88%)
Frame = -1 / +1
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQDV 507
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD+
Sbjct: 397 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQDM 576
Query: 506 VV 501
V+
Sbjct: 577 VM 582
Score = 97.7 bits (207), Expect(2) = 3e-024
Identities = 43/62 (69%), Positives = 48/62 (77%)
Frame = -3 / +3
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAGC 508
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 396 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGY 575
Query: 507 GS 502
G+
Sbjct: 576 GN 581
Score = 55.6 bits (115), Expect(2) = 3e-040
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -3
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 354 PVQELPRLHEKVRSSMFFC*ALVAL 280
Score = 51.0 bits (105), Expect(2) = 1e-033
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +2
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 269 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 382
Score = 34.5 bits (69), Expect(2) = 3e-024
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / +1
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 295 SAEEHAAADFLMETRQLLHRAAGSRGV 375
>gb|BU996805.1|BU996805 HM14N04r HM Hordeum vulgare subsp. vulgare cDNA clone HM14N04
5-PRIME, mRNA sequence
Length = 612
Score = 122 bits (260), Expect(2) = 3e-037
Identities = 44/82 (53%), Positives = 57/82 (69%)
Frame = +3 / +2
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
NV PGTVVD ++CHP FDF++C+HAG+ GT+RP HYH+L D+ FS DDLQ L ++L Y
Sbjct: 278 NVMPGTVVDRQICHPTEFDFFLCSHAGIKGTSRPAHYHVLRDDNNFSADDLQSLTNNLCY 457
Query: 576 VYQRSTTAISVVAPICYAHLAA 641
Y T ++S P YAH A
Sbjct: 458 TYASCTRSVSTAPPAYYAHKLA 523
Score = 53.8 bits (111), Expect(2) = 3e-037
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +3 / +2
Query: 162 IRECLIDFYTSSGKRKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTL 341
I + L+ + K KP Q+I +RDGVSE QF VL E+ +I +A K L P +
Sbjct: 32 IAKKLLLSFEQHSKHKPQQLIFYRDGVSEGQFRMVLENEIPEIEKAWKALYNVKPPITFI 211
Query: 342 IIAQKNHHTKFFIPGK 389
++ +++H F GK
Sbjct: 212 VVQKRHHTRLFPSDGK 259
>gb|BU976900.1|BU976900 HA10I02u HA Hordeum vulgare subsp. vulgare cDNA clone HA10I02
3-PRIME, mRNA sequence
Length = 514
Score = 119 bits (255), Expect(2) = 4e-037
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +3 / -3
Query: 510 ILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
ILHDEI F+ DDLQ+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 512 ILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 345
Score = 109 bits (233), Expect(2) = 1e-032
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = -1 / +3
Query: 686 RLRHLIELYELANLSSCQMCVADGSND*YGCCAPLVHIRERMHQLLQIIRTEAYLIMQD 510
RL HLI+LYEL +LSSC+MC+AD N+*Y CCAPLVHIRERMH++LQ+IR + YLIMQD
Sbjct: 336 RLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLIMQD 512
Score = 95.5 bits (202), Expect(2) = 1e-023
Identities = 42/59 (71%), Positives = 46/59 (77%)
Frame = -3 / +2
Query: 687 TSPTSHRTL*TGQPEQLPDVRSRWEQRLIWLLCSFGTHKRANAPAPADHQD*SLSHHAG 511
TS TSH+TL*T PEQL DV SR E++LI LLCSFGTHKRANA PA H S+SHHAG
Sbjct: 335 TSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAG 511
Score = 55.6 bits (115), Expect(2) = 4e-037
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3 / -3
Query: 726 PVQELPRLHEKVRSSMFFC*AVVLL 800
PVQELPRLHEKVRSSMFFC*A+V L
Sbjct: 293 PVQELPRLHEKVRSSMFFC*ALVAL 219
Score = 51.0 bits (105), Expect(2) = 1e-032
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +1
Query: 811 IHQKSKTTAQQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
+ + S T+AQQKN+ L TFS RRGSS TG L EV PP
Sbjct: 208 LERASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 321
Score = 34.5 bits (69), Expect(2) = 1e-023
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1 / +3
Query: 785 SAKEHRAPHFLMQARQLLDRNAARRSM 705
SA+EH A FLM+ RQLL R A R +
Sbjct: 234 SAEEHAAADFLMETRQLLHRAAGSRGV 314
>gb|BG415995.2|BG415995 HVSMEk0009F13f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0009F13f, mRNA sequence
Length = 970
Score = 134 bits (287), Expect(2) = 1e-032
Identities = 51/105 (48%), Positives = 72/105 (68%)
Frame = +3 / +1
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFS 536
N+H + N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+
Sbjct: 49 NNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 228
Query: 537 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFD 671
D+LQ L ++L Y Y R T ++S+V P YAHLAA + +++ D
Sbjct: 229 ADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 363
Score = 25.8 bits (50), Expect(2) = 1e-032
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 336 TLIIAQKNHHTKFF 377
T ++ QK HHT+ F
Sbjct: 4 TFVVVQKRHHTRLF 45
>gb|BQ664937.1|BQ664937 HX01H11w HX Hordeum vulgare subsp. vulgare cDNA clone HX01H11
3-PRIME, mRNA sequence
Length = 669
Score = 109 bits (233), Expect(2) = 6e-031
Identities = 45/54 (83%), Positives = 49/54 (90%)
Frame = +3 / -2
Query: 516 HDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
HDEIGFS D+LQE VHSLSYVYQRSTTAISV API YAHLAAAQVG F+KF++M
Sbjct: 668 HDEIGFSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDM 507
Score = 68.4 bits (143), Expect(2) = 9e-021
Identities = 31/63 (49%), Positives = 37/63 (58%)
Frame = -2 / +1
Query: 703 PP*LEDVSDISSNFMNWPTXXXXXXX*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 524
PP L++VSD+SSNFM PT +GA T++AVVLLWY S LKPI
Sbjct: 481 PPWLDEVSDMSSNFMKVPTCAAARCAYAIGAATEIAVVLLWYT*ESEWTNSWSSSALKPI 660
Query: 523 SSC 515
SSC
Sbjct: 661 SSC 669
Score = 51.9 bits (107), Expect(2) = 9e-021
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -2 / +1
Query: 784 QQKNIELLTFSCRRGSSWTGTLPAEVCPP 698
QQKN+ELLTFSC RGSS T LP +V PP
Sbjct: 397 QQKNMELLTFSCSRGSSGTEALPTDVWPP 483
Score = 45.1 bits (92), Expect(2) = 6e-031
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3 / -2
Query: 729 VQELPRLHEKVRSSMFFC*AVVLL 800
V ELPRLHEKVRSSMFFC* LL
Sbjct: 452 VPELPRLHEKVRSSMFFC*WARLL 381
>gb|BE194563.1|BE194563 HVSMEh0086A12f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0086A12f, mRNA sequence
Length = 841
Score = 63.4 bits (132), Expect(4) = 3e-030
Identities = 27/46 (58%), Positives = 28/46 (60%)
Frame = +3 / +3
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPRE 143
PG REWPLISKYRASV TQSPK EM+ SLF P E
Sbjct: 348 PGQSDRPSIAAVVSSREWPLISKYRASVHTQSPKHEMMASLFNPGE 485
Score = 54.7 bits (113), Expect(4) = 3e-030
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +3 / +3
Query: 198 GKRKPDQVIIFRDGVSESQFNQVLNIEL 281
G RKP+QVIIFRDGVSE+ F QV+NIEL
Sbjct: 540 GSRKPNQVIIFRDGVSENPFTQVINIEL 623
Score = 43.7 bits (89), Expect(4) = 3e-030
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3 / +2
Query: 135 PREAEDDGLIRECLIDFYTSSGK 203
PR EDDGLIRE LIDF T+SGK
Sbjct: 476 PRGTEDDGLIRESLIDFSTTSGK 544
Score = 25.8 bits (50), Expect(4) = 3e-030
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3 / +3
Query: 324 NPKFTLIIAQKNHHTKFFIPGKPDNVP 404
NP ++A KN KFF P++VP
Sbjct: 669 NPSSQSLLA*KNPSPKFFHTNFPEHVP 749
>gb|BJ473415.1|BJ473415 BJ473415 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12f16 3', mRNA sequence
Length = 588
Score = 132 bits (283), Expect = 3e-030
Identities = 49/92 (53%), Positives = 68/92 (73%)
Frame = +3 / -3
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D+LQ L ++L Y
Sbjct: 559 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCY 380
Query: 576 VYQRSTTAISVVAPICYAHLAAAQVGQFIKFD 671
Y R T ++S+V P YAHLAA + +++ D
Sbjct: 379 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 284
>gb|CB874722.1|CB874722 HX06C02w HX Hordeum vulgare subsp. vulgare cDNA clone HX06C02
3-PRIME, mRNA sequence
Length = 645
Score = 132 bits (283), Expect = 3e-030
Identities = 49/92 (53%), Positives = 68/92 (73%)
Frame = +3 / -2
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSY 575
N+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D+LQ L ++L Y
Sbjct: 608 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCY 429
Query: 576 VYQRSTTAISVVAPICYAHLAAAQVGQFIKFD 671
Y R T ++S+V P YAHLAA + +++ D
Sbjct: 428 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 333
>gb|CB874756.1|CB874756 HX06D16w HX Hordeum vulgare subsp. vulgare cDNA clone HX06D16
3-PRIME, mRNA sequence
Length = 635
Score = 129 bits (277), Expect = 2e-029
Identities = 48/91 (52%), Positives = 67/91 (73%)
Frame = +3 / -3
Query: 399 VPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYV 578
+ PGTVVD+K+CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D+LQ L ++L Y
Sbjct: 600 ILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYT 421
Query: 579 YQRSTTAISVVAPICYAHLAAAQVGQFIKFD 671
Y R T ++S+V P YAHLAA + +++ D
Sbjct: 420 YARCTRSVSIVPPAYYAHLAAFRARFYMEPD 328
>gb|AV921670.1|AV921670 AV921670 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12e13 3', mRNA sequence
Length = 589
Score = 77.6 bits (163), Expect(3) = 5e-029
Identities = 30/53 (56%), Positives = 38/53 (71%)
Frame = +3 / -2
Query: 483 GTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 641
GT+RP HYH+L DE FS D++Q L ++L Y Y R T ++SVV P YAHLAA
Sbjct: 501 GTSRPAHYHVLWDENNFSADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAA 343
Score = 62.0 bits (129), Expect(3) = 5e-029
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +3 / -1
Query: 396 NVPPGTVVDNKVCHPKNFDFYMCAHAGMIG 485
N+ PGTVVD+K+CHP FDFY+C+HAG+ G
Sbjct: 589 NILPGTVVDSKICHPTEFDFYLCSHAGIPG 500
Score = 26.3 bits (51), Expect(3) = 5e-029
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3 / -2
Query: 729 VQELPRLHEKVRSSMFFC* 785
V+ LP + EKV+ MF+C*
Sbjct: 261 VKPLPAVKEKVKRVMFYC* 205
>gb|BE196054.2|BE196054 HVSMEh0091D21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091D21f, mRNA sequence
Length = 914
Score = 76.2 bits (160), Expect(3) = 3e-027
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +3 / +1
Query: 204 RKPDQVIIFRDGVSESQFNQVLNIELQQIIEACKFLDEKWNPKFTLIIAQKNHHTKFF 377
+KP ++I +RDGVSE QF QVL EL I +AC L+ + P T ++ QK HHTK F
Sbjct: 226 QKPQRIIFYRDGVSEGQFYQVLRYELDAIRKACASLEPNYQPPVTFVVVQKRHHTKLF 399
Score = 45.1 bits (92), Expect(3) = 3e-027
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3 / +1
Query: 357 NHHTKFFIPGKPDNVPPGTVVDNKVCHPKNFDFYMCAHA 473
N+H + N+ PGT +K+ HP FDFY+C+HA
Sbjct: 403 NNHNDQRTGDRSGNILPGTGGGSKIWHPNEFDFYLCSHA 519
Score = 38.6 bits (78), Expect(3) = 3e-027
Identities = 19/71 (26%), Positives = 29/71 (40%)
Frame = +3 / +1
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLIDF 185
PG ++WP ++KY V Q+ + E+I LFK + G + +I
Sbjct: 16 PGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMIKE 195
Query: 186 YTSSGKRKPDQ 218
S KR Q
Sbjct: 196 LLISFKRATGQ 228
>gb|BQ659639.1|BQ659639 HF01C16w HF Hordeum vulgare subsp. vulgare cDNA clone HF01C16
3-PRIME, mRNA sequence
Length = 623
Score = 96.4 bits (204), Expect(2) = 5e-027
Identities = 40/49 (81%), Positives = 44/49 (89%)
Frame = +3 / -2
Query: 531 FSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 677
FS D+LQE VHSLSYVYQRSTTAISV API YAHLAAAQVG F+KF++M
Sbjct: 622 FSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDM 476
Score = 45.1 bits (92), Expect(2) = 5e-027
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3 / -2
Query: 729 VQELPRLHEKVRSSMFFC*AVVLL 800
V ELPRLHEKVRSSMFFC* LL
Sbjct: 421 VPELPRLHEKVRSSMFFC*WARLL 350
>gb|BG415324.2|BG415324 HVSMEk0006A22f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0006A22f, mRNA sequence
Length = 639
Score = 117 bits (251), Expect = 8e-026
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +3 / +2
Query: 387 KPDNVPPGTVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHS 566
K NV PGTVVD ++ P +DFY+C+H G+IGT+RPTHY+ L DE G+ DDLQ LV++
Sbjct: 2 KNGNVLPGTVVDTRIVDPVTYDFYLCSHNGLIGTSRPTHYYNLMDEHGYGSDDLQRLVYN 181
Query: 567 LSYVYQRSTTAISVVAPICYAHLAA 641
L +V+ R T +S+ P+ YA LAA
Sbjct: 182 LCFVFARCTKPVSLATPVYYADLAA 256
>gb|BU973725.1|BU973725 HB25M17r BC Hordeum vulgare subsp. vulgare cDNA clone HB25M17
5-PRIME, mRNA sequence
Length = 506
Score = 109 bits (233), Expect(2) = 2e-024
Identities = 41/68 (60%), Positives = 52/68 (76%)
Frame = +3 / +1
Query: 438 PKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAP 617
P FDFY+C+HAG+ GT+RPTHYH+L DE GF+ D LQ+L ++L Y Y R T ++SVV P
Sbjct: 13 PTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQLTNNLCYTYARCTRSVSVVPP 192
Query: 618 ICYAHLAA 641
YAHLAA
Sbjct: 193 AYYAHLAA 216
Score = 24.9 bits (48), Expect(2) = 2e-024
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3 / +1
Query: 738 LPRLHEKVRSSMFFC* 785
LPR+ + V+ MF+C*
Sbjct: 343 LPRIRDNVKEVMFYC* 390
>gb|BU971696.1|BU971696 HB19G05r BC Hordeum vulgare subsp. vulgare cDNA clone HB19G05
5-PRIME, mRNA sequence
Length = 644
Score = 112 bits (240), Expect = 3e-024
Identities = 45/65 (69%), Positives = 50/65 (76%)
Frame = +3 / +1
Query: 3 SPGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLID 182
SPG REWPL+SKYRASVR+QSPK+EMIDSLFKP+ EDDGL+RECLID
Sbjct: 448 SPGQSDIPSIAAVVGSREWPLVSKYRASVRSQSPKLEMIDSLFKPQGTEDDGLVRECLID 627
Query: 183 FYTSS 197
FYTSS
Sbjct: 628 FYTSS 642
>gb|BJ468650.1|BJ468650 BJ468650 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39l05 3', mRNA sequence
Length = 673
Score = 111 bits (236), Expect = 9e-024
Identities = 41/80 (51%), Positives = 57/80 (71%)
Frame = +3 / -3
Query: 432 CHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAISVV 611
CHP FDFY+C+HAG+ GT+RP HYH+L DE F+ D+LQ L ++L Y Y R T ++S+V
Sbjct: 671 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIV 492
Query: 612 APICYAHLAAAQVGQFIKFD 671
P YAHLAA + +++ D
Sbjct: 491 PPAYYAHLAAFRARFYMEPD 432
>gb|BU998822.1|BU998822 HI12E07r HI Hordeum vulgare subsp. vulgare cDNA clone HI12E07
5-PRIME, mRNA sequence
Length = 556
Score = 109 bits (232), Expect = 3e-023
Identities = 46/67 (68%), Positives = 48/67 (71%)
Frame = +3 / +2
Query: 6 PGHXXXXXXXXXXXXREWPLISKYRASVRTQSPKMEMIDSLFKPREAEDDGLIRECLIDF 185
PG REWPLISKYRA+V TQSPK EM+ SLFKPR EDDGLIRE LIDF
Sbjct: 356 PGQSDRPSIAAVVSSREWPLISKYRATVHTQSPKQEMMASLFKPRGTEDDGLIRESLIDF 535
Query: 186 YTSSGKR 206
YTSSGKR
Sbjct: 536 YTSSGKR 556
>gb|CB859263.1|CB859263 HI09O13w HI Hordeum vulgare subsp. vulgare cDNA clone HI09O13
3-PRIME, mRNA sequence
Length = 544
Score = 107 bits (229), Expect = 8e-023
Identities = 40/77 (51%), Positives = 56/77 (72%)
Frame = +3 / -2
Query: 411 TVVDNKVCHPKNFDFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRS 590
TVVD ++ P +DFY+C+H G+IGT+RPTHY+ L DE G+ DDLQ LV++L +V+ R
Sbjct: 543 TVVDTRIVDPVTYDFYLCSHNGLIGTSRPTHYYNLMDEHGYGSDDLQRLVYNLCFVFARC 364
Query: 591 TTAISVVAPICYAHLAA 641
T +S+ P+ YA LAA
Sbjct: 363 TKPVSLATPVYYADLAA 313
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 500,538,701
Number of Sequences: 312970
Number of extensions: 7987159
Number of successful extensions: 45659
Number of sequences better than 1.0e-020: 68
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 12210084310
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)