TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404801.2.1
(867 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA031166.1|CA031166 HX09D06r HX Hordeum vulgare subsp. v... 258 1e-077
gb|CB876456.1|CB876456 HX11F07w HX Hordeum vulgare subsp. v... 258 1e-077
gb|BU969384.1|BU969384 HB11G01r BC Hordeum vulgare subsp. v... 252 8e-076
gb|BU975642.1|BU975642 HB31N05r BC Hordeum vulgare subsp. v... 243 1e-071
gb|BE195976.3|BE195976 HVSMEh0091A07f Hordeum vulgare 5-45 ... 243 4e-071
gb|BU971417.1|BU971417 HB17I20r BC Hordeum vulgare subsp. v... 232 9e-070
gb|AV918379.1|AV918379 AV918379 K. Sato unpublished cDNA li... 230 4e-069
gb|AV918127.1|AV918127 AV918127 K. Sato unpublished cDNA li... 227 3e-068
gb|BQ462861.1|BQ462861 HI02D22r HI Hordeum vulgare subsp. v... 255 2e-067
gb|BF629097.2|BF629097 HVSMEb0009N21f Hordeum vulgare seedl... 240 6e-066
gb|CB876294.1|CB876294 HX10N18w HX Hordeum vulgare subsp. v... 215 1e-064
gb|CB875735.1|CB875735 HX09D06w HX Hordeum vulgare subsp. v... 215 1e-064
gb|CB874380.1|CB874380 HX05B15w HX Hordeum vulgare subsp. v... 215 1e-064
gb|CB875995.1|CB875995 HX09P10w HX Hordeum vulgare subsp. v... 215 1e-064
gb|BU974279.1|BU974279 HB27H05r BC Hordeum vulgare subsp. v... 243 1e-063
gb|BU985772.1|BU985772 HF08J07r HF Hordeum vulgare subsp. v... 243 1e-063
gb|AV918025.1|AV918025 AV918025 K. Sato unpublished cDNA li... 204 1e-061
gb|BQ472674.1|BQ472674 HB01M23r BC Hordeum vulgare subsp. v... 178 1e-053
gb|BU969648.1|BU969648 HB12C12r BC Hordeum vulgare subsp. v... 201 4e-051
gb|AV931339.1|AV931339 AV931339 K. Sato unpublished cDNA li... 166 5e-050
gb|CA022160.1|CA022160 HZ42F08r HZ Hordeum vulgare subsp. v... 168 4e-041
gb|AV937068.1|AV937068 AV937068 K. Sato unpublished cDNA li... 134 2e-040
gb|CB876232.1|CB876232 HX10K21w HX Hordeum vulgare subsp. v... 128 8e-039
gb|BU976900.1|BU976900 HA10I02u HA Hordeum vulgare subsp. v... 118 1e-035
gb|BM100617.2|BM100617 EBma01_SQ005_L23_R maternal, 4 DPA, ... 134 2e-034
gb|BJ451080.1|BJ451080 BJ451080 K. Sato unpublished cDNA li... 137 3e-034
gb|CA030113.1|CA030113 HX06C02r HX Hordeum vulgare subsp. v... 131 1e-032
gb|BG415995.2|BG415995 HVSMEk0009F13f Hordeum vulgare testa... 131 7e-032
gb|AV916245.1|AV916245 AV916245 K. Sato unpublished cDNA li... 131 2e-031
gb|BQ664937.1|BQ664937 HX01H11w HX Hordeum vulgare subsp. v... 108 3e-031
gb|BJ473415.1|BJ473415 BJ473415 K. Sato unpublished cDNA li... 129 2e-029
gb|CB874722.1|CB874722 HX06C02w HX Hordeum vulgare subsp. v... 129 2e-029
gb|BU996805.1|BU996805 HM14N04r HM Hordeum vulgare subsp. v... 118 5e-029
gb|CB874756.1|CB874756 HX06D16w HX Hordeum vulgare subsp. v... 127 8e-029
gb|AV921670.1|AV921670 AV921670 K. Sato unpublished cDNA li... 76 5e-028
gb|BU971142.1|BU971142 HB16L19r BC Hordeum vulgare subsp. v... 112 9e-028
gb|BQ659639.1|BQ659639 HF01C16w HF Hordeum vulgare subsp. v... 95 3e-027
gb|BU986936.1|BU986936 HF13F11r HF Hordeum vulgare subsp. v... 116 2e-025
gb|BG415324.2|BG415324 HVSMEk0006A22f Hordeum vulgare testa... 115 4e-025
gb|BU973725.1|BU973725 HB25M17r BC Hordeum vulgare subsp. v... 110 9e-025
gb|BJ468650.1|BJ468650 BJ468650 K. Sato unpublished cDNA li... 111 4e-024
gb|BE215344.1|BE215344 HV_CEb0006I15f Hordeum vulgare seedl... 101 1e-023
gb|CB859263.1|CB859263 HI09O13w HI Hordeum vulgare subsp. v... 108 4e-023
gb|CD663310.1|CD663310 UCRHV18_05ad02_b1 Drought-stressed D... 78 6e-021
emb|AJ234606.1|HVU234606 Hordeum vulgare genomic DNA fragme... 52 6e-021
>gb|CA031166.1|CA031166 HX09D06r HX Hordeum vulgare subsp. vulgare cDNA clone HX09D06
5-PRIME, mRNA sequence
Length = 647
Score = 258 bits (558), Expect(2) = 1e-077
Identities = 101/114 (88%), Positives = 107/114 (93%)
Frame = +1 / +1
Query: 130 TLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHIL 309
TLI+AQKNHHTKFF+PG PDNVP GTVVDN VCHPRN+DFYMC+HAGMIGTTRPTHYHIL
Sbjct: 40 TLIVAQKNHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHIL 219
Query: 310 HDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
HDEI F DDLQ+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 220 HDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 381
Score = 184 bits (397), Expect(2) = 1e-054
Identities = 73/130 (56%), Positives = 98/130 (75%)
Frame = -1 / -3
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 402 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 223
Query: 312 MQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNIIWLSRNEKFSVVILLGNDQ 133
MQD+++ WP PNHSSM HV++ +PWM D ++NNSA +I+ SR+EK VVILL N+Q
Sbjct: 222 MQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIVRRSRHEKLCVVILLSNNQ 43
Query: 132 CELGIHFSSR 103
C G +F R
Sbjct: 42 CNWGSNFHPR 13
Score = 181 bits (389), Expect(2) = 2e-050
Identities = 87/123 (70%), Positives = 92/123 (74%)
Frame = -2 / -1
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 407 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 228
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFWAM 138
SSCR+ * VGLVVPIIPA HM*KS FLG QT LSTTVP GTLSG PGMKN VW*FF A
Sbjct: 227 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMKNFVW*FF*AT 48
Query: 137 INV 129
I+V
Sbjct: 47 ISV 39
Score = 136 bits (292), Expect = 1e-031
Identities = 71/129 (55%), Positives = 83/129 (64%)
Frame = -3 / -2
Query: 478 SPTSRRTL*TAQPGRLQGGRSRWEQQLIWLLCSFGTRKRASAPAPAGHQD*SLSRHAGCD 299
S TS +TL*TA P +LQ SR E+QLI LLCSFGT KRA+A PAGH S+S HAG
Sbjct: 388 SRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGYG 209
Query: 298 SELAW*SQSFQHVNTCRNRSSLDDRLCCQQQCRLEHYLAFQE*KI*CGDSSGQ*SM*TWD 119
+ LA SQSFQH TC++ +SLD R QQQC+ H Q *K CGDSS Q S+*
Sbjct: 208 NVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGHCQEIQA*KTLCGDSSEQQSV*LGF 29
Query: 118 SFLIKNLQA 92
F KN +A
Sbjct: 28 QFSSKNPRA 2
Score = 117 bits (251), Expect(2) = 6e-030
Identities = 68/127 (53%), Positives = 72/127 (56%)
Frame = +2 / +2
Query: 98 QILDEK*IPSSH*SLPRRITTLNFSFLESQIMFQPALLLTTKSVIQGTSISTCVHMLE*L 277
++L K P H* L RRITT +FS L+ M ALLL S IQG TC MLE*L
Sbjct: 8 RVLG*KLEPQLH*LLLRRITTQSFSCLDLLTMSLLALLLIMLSAIQGIMTFTCALMLE*L 187
Query: 278 GLPGQLTITSCMTR*ASILMTCRSWCTRSLTCTKGAQQPYQLLLPSATPTLQPPRLGSS* 457
G GQ SCM R MTCR C RSL CTKGAQQ YQL L SA LQ R SS*
Sbjct: 188 GQQGQHITISCMMRYTLPRMTCRILCIRSLMCTKGAQQQYQLFLQSAMHILQLLRWRSS* 367
Query: 458 SSTRCRR 478
S RC R
Sbjct: 368 SLMRCPR 388
Score = 98.2 bits (208), Expect(2) = 3e-025
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = +3 / +3
Query: 234 KELRFLHVFTCWNDWDYQANSLSHPA*RDRLQS**PXXXXXXXXXRVPKEHNSHISCCSH 413
KEL LHV +CWNDWD +AN+L +PA* D L *P VPKEHNS+ISC S+
Sbjct: 144 KEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLCVPKEHNSNISCFSN 323
Query: 414 LLRPPCSRPGWAVHKVRRDVGDFI*P 491
LL CS G AVHKV DV D + P
Sbjct: 324 LLCTSCSCSGGAVHKV**DVRDVVEP 401
Score = 51.9 bits (107), Expect(2) = 1e-077
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / +1
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 433 PVQELPRLHEKVRSSMFFC*A 495
Score = 48.7 bits (100), Expect(2) = 1e-054
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / -1
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 512 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 405
Score = 38.6 bits (78), Expect(2) = 2e-050
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / -3
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 492 SAEEHAAADFLMETRQLLHRAAGSRGV 412
Score = 36.8 bits (74), Expect(2) = 3e-025
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3 / +3
Query: 102 FLMRNESQVHIDHCPEESPH*IFHSW 179
FL N + + D C EESPH +FH+W
Sbjct: 12 FLDENWNPSYTDCCSEESPHKVFHAW 89
Score = 33.1 bits (66), Expect(2) = 6e-030
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / +2
Query: 473 RRLHLAMGGIPRRAASLSRSCPVCMRK*GAPCSSAEQ 583
RR + P A+ RSC V MRK A CSSAE+
Sbjct: 386 RRRRARVVATPLLPAARCRSCLVSMRKSAAACSSAER 496
>gb|CB876456.1|CB876456 HX11F07w HX Hordeum vulgare subsp. vulgare cDNA clone HX11F07
3-PRIME, mRNA sequence
Length = 641
Score = 258 bits (558), Expect(2) = 1e-077
Identities = 101/114 (88%), Positives = 107/114 (93%)
Frame = +1 / -2
Query: 130 TLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHIL 309
TLI+AQKNHHTKFF+PG PDNVP GTVVDN VCHPRN+DFYMC+HAGMIGTTRPTHYHIL
Sbjct: 640 TLIVAQKNHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHIL 461
Query: 310 HDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
HDEI F DDLQ+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 460 HDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 299
Score = 181 bits (389), Expect(2) = 2e-053
Identities = 87/123 (70%), Positives = 92/123 (74%)
Frame = -2 / +3
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 273 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 452
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFWAM 138
SSCR+ * VGLVVPIIPA HM*KS FLG QT LSTTVP GTLSG PGMKN VW*FF A
Sbjct: 453 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMKNFVW*FF*AT 632
Query: 137 INV 129
I+V
Sbjct: 633 ISV 641
Score = 179 bits (385), Expect(2) = 6e-050
Identities = 70/121 (57%), Positives = 94/121 (77%)
Frame = -1 / +2
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 278 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 457
Query: 312 MQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNIIWLSRNEKFSVVILLGNDQ 133
MQD+++ WP PNHSSM HV++ +PWM D ++NNSA +I+ SR+EK VVILL N+Q
Sbjct: 458 MQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIVRRSRHEKLCVVILLSNNQ 637
Query: 132 C 130
C
Sbjct: 638 C 640
Score = 132 bits (282), Expect = 3e-030
Identities = 66/116 (56%), Positives = 77/116 (66%)
Frame = -3 / +1
Query: 478 SPTSRRTL*TAQPGRLQGGRSRWEQQLIWLLCSFGTRKRASAPAPAGHQD*SLSRHAGCD 299
S TS +TL*TA P +LQ SR E+QLI LLCSFGT KRA+A PAGH S+S HAG
Sbjct: 292 SRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGYG 471
Query: 298 SELAW*SQSFQHVNTCRNRSSLDDRLCCQQQCRLEHYLAFQE*KI*CGDSSGQ*SM 131
+ LA SQSFQH TC++ +SLD R QQQC+ H Q *K CGDSS Q S+
Sbjct: 472 NVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGHCQEIQA*KTLCGDSSEQQSV 639
Score = 115 bits (245), Expect(2) = 4e-029
Identities = 65/116 (56%), Positives = 67/116 (57%)
Frame = +2 / -3
Query: 131 H*SLPRRITTLNFSFLESQIMFQPALLLTTKSVIQGTSISTCVHMLE*LGLPGQLTITSC 310
H* L RRITT +FS L+ M ALLL S IQG TC MLE*LG GQ SC
Sbjct: 639 H*LLLRRITTQSFSCLDLLTMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISC 460
Query: 311 MTR*ASILMTCRSWCTRSLTCTKGAQQPYQLLLPSATPTLQPPRLGSS*SSTRCRR 478
M R MTCR C RSL CTKGAQQ YQL L SA LQ R SS*S RC R
Sbjct: 459 MMRYTLPRMTCRILCIRSLMCTKGAQQQYQLFLQSAMHILQLLRWRSS*SLMRCPR 292
Score = 98.2 bits (208), Expect(2) = 6e-025
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = +3 / -1
Query: 234 KELRFLHVFTCWNDWDYQANSLSHPA*RDRLQS**PXXXXXXXXXRVPKEHNSHISCCSH 413
KEL LHV +CWNDWD +AN+L +PA* D L *P VPKEHNS+ISC S+
Sbjct: 536 KEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLCVPKEHNSNISCFSN 357
Query: 414 LLRPPCSRPGWAVHKVRRDVGDFI*P 491
LL CS G AVHKV DV D + P
Sbjct: 356 LLCTSCSCSGGAVHKV**DVRDVVEP 279
Score = 51.9 bits (107), Expect(2) = 1e-077
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -2
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 247 PVQELPRLHEKVRSSMFFC*A 185
Score = 48.7 bits (100), Expect(2) = 2e-053
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / +3
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 168 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 275
Score = 38.6 bits (78), Expect(2) = 6e-050
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +2
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 188 SAEEHAAADFLMETRQLLHRAAGSRGV 268
Score = 35.9 bits (72), Expect(2) = 6e-025
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3 / -1
Query: 129 HIDHCPEESPH*IFHSW 179
H D C EESPH +FH+W
Sbjct: 641 HTDCCSEESPHKVFHAW 591
Score = 33.1 bits (66), Expect(2) = 4e-029
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / -3
Query: 473 RRLHLAMGGIPRRAASLSRSCPVCMRK*GAPCSSAEQ 583
RR + P A+ RSC V MRK A CSSAE+
Sbjct: 294 RRRRARVVATPLLPAARCRSCLVSMRKSAAACSSAER 184
>gb|BU969384.1|BU969384 HB11G01r BC Hordeum vulgare subsp. vulgare cDNA clone HB11G01
5-PRIME, mRNA sequence
Length = 548
Score = 252 bits (545), Expect(2) = 8e-076
Identities = 98/111 (88%), Positives = 104/111 (93%)
Frame = +1 / +3
Query: 139 IAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDE 318
+AQKNHHTKFF+PG PDNVP GTVVDN VCHPRN+DFYMC+HAGMIGTTRPTHYHILHDE
Sbjct: 12 VAQKNHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDE 191
Query: 319 IGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
I F DDLQ+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 192 IHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 344
Score = 177 bits (381), Expect(2) = 2e-052
Identities = 84/117 (71%), Positives = 88/117 (75%)
Frame = -2 / -2
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 370 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 191
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FF 147
SSCR+ * VGLVVPIIPA HM*KS FLG QT LSTTVP GTLSG PGMKN VW*FF
Sbjct: 190 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMKNFVW*FF 20
Score = 176 bits (378), Expect(2) = 6e-049
Identities = 69/121 (57%), Positives = 92/121 (76%)
Frame = -1 / -1
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 365 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 186
Query: 312 MQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNIIWLSRNEKFSVVILLGNDQ 133
MQD+++ WP PNHSSM HV++ +PWM D ++NNSA +I+ SR+EK VVILL N
Sbjct: 185 MQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIVRRSRHEKLCVVILLSNTS 6
Query: 132 C 130
C
Sbjct: 5 C 3
Score = 131 bits (281), Expect = 5e-030
Identities = 65/113 (57%), Positives = 75/113 (66%)
Frame = -3 / -3
Query: 478 SPTSRRTL*TAQPGRLQGGRSRWEQQLIWLLCSFGTRKRASAPAPAGHQD*SLSRHAGCD 299
S TS +TL*TA P +LQ SR E+QLI LLCSFGT KRA+A PAGH S+S HAG
Sbjct: 351 SRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGYG 172
Query: 298 SELAW*SQSFQHVNTCRNRSSLDDRLCCQQQCRLEHYLAFQE*KI*CGDSSGQ 140
+ LA SQSFQH TC++ +SLD R QQQC+ H Q *K CGDSS Q
Sbjct: 171 NVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGHCQEIQA*KTLCGDSSEQ 13
Score = 112 bits (240), Expect(2) = 2e-028
Identities = 64/116 (55%), Positives = 66/116 (56%)
Frame = +2 / +1
Query: 131 H*SLPRRITTLNFSFLESQIMFQPALLLTTKSVIQGTSISTCVHMLE*LGLPGQLTITSC 310
H L RRITT +FS L+ M ALLL S IQG TC MLE*LG GQ SC
Sbjct: 4 HEVLLRRITTQSFSCLDLLTMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISC 183
Query: 311 MTR*ASILMTCRSWCTRSLTCTKGAQQPYQLLLPSATPTLQPPRLGSS*SSTRCRR 478
M R MTCR C RSL CTKGAQQ YQL L SA LQ R SS*S RC R
Sbjct: 184 MMRYTLPRMTCRILCIRSLMCTKGAQQQYQLFLQSAMHILQLLRWRSS*SLMRCPR 351
Score = 98.2 bits (208), Expect(2) = 1e-023
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = +3 / +2
Query: 234 KELRFLHVFTCWNDWDYQANSLSHPA*RDRLQS**PXXXXXXXXXRVPKEHNSHISCCSH 413
KEL LHV +CWNDWD +AN+L +PA* D L *P VPKEHNS+ISC S+
Sbjct: 107 KEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLCVPKEHNSNISCFSN 286
Query: 414 LLRPPCSRPGWAVHKVRRDVGDFI*P 491
LL CS G AVHKV DV D + P
Sbjct: 287 LLCTSCSCSGGAVHKV**DVRDVVEP 364
Score = 51.9 bits (107), Expect(2) = 8e-076
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / +3
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 396 PVQELPRLHEKVRSSMFFC*A 458
Score = 48.7 bits (100), Expect(2) = 2e-052
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / -2
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 475 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 368
Score = 38.6 bits (78), Expect(2) = 6e-049
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / -1
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 455 SAEEHAAADFLMETRQLLHRAAGSRGV 375
Score = 33.1 bits (66), Expect(2) = 2e-028
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / +1
Query: 473 RRLHLAMGGIPRRAASLSRSCPVCMRK*GAPCSSAEQ 583
RR + P A+ RSC V MRK A CSSAE+
Sbjct: 349 RRRRARVVATPLLPAARCRSCLVSMRKSAAACSSAER 459
Score = 31.3 bits (62), Expect(2) = 1e-023
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 141 CPEESPH*IFHSW 179
C EESPH +FH+W
Sbjct: 14 CSEESPHKVFHAW 52
>gb|BU975642.1|BU975642 HB31N05r BC Hordeum vulgare subsp. vulgare cDNA clone HB31N05
5-PRIME, mRNA sequence
Length = 617
Score = 243 bits (525), Expect(2) = 1e-071
Identities = 92/117 (78%), Positives = 106/117 (90%)
Frame = +1 / +2
Query: 121 PKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHY 300
PKFT+I+AQKNHHT+FF P+NVP GTVVD +VCHP+NFDFYMC+HAGMIGT+RPTHY
Sbjct: 47 PKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHY 226
Query: 301 HILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
H+LHDEIGF+ D+LQE VHSLSYVYQRSTTAISV API YAHLAAAQVG F+KF++M
Sbjct: 227 HVLHDEIGFSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDM 397
Score = 166 bits (358), Expect(2) = 3e-051
Identities = 82/126 (65%), Positives = 87/126 (69%)
Frame = -2 / -3
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLDEVSD+SSNFM PT AAAR A +GA T++AVVLLWY S LKPI
Sbjct: 423 PPWLDEVSDMSSNFMKVPTCAAARCAYAIGAATEIAVVLLWYT*ESEWTNSWSSSALKPI 244
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFWAM 138
SSCR * VGL VPIIPAC HM*KSKFLG T LSTTVP GT SG KNLV FF A
Sbjct: 243 SSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGGTFSGEFVWKNLV*WFF*AT 64
Query: 137 INVNLG 120
+ VNLG
Sbjct: 63 MTVNLG 46
Score = 120 bits (257), Expect(2) = 3e-035
Identities = 56/133 (42%), Positives = 86/133 (64%)
Frame = -1 / -2
Query: 516 AARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQV 337
A RR P +AR S+RH+++L+E +L ++ V S+ * APLVH+R+RV +LL++
Sbjct: 442 AHRRVAPSLARRSVRHVLKLHEGAHLRRRQMRVRYWSSY*NRRRAPLVHIRKRVDKLLEL 263
Query: 336 IRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNIIWLSRNEKFSV 157
+R EA L+MQ++++ WP NH SM THVE++V M +++ NI W EK V
Sbjct: 262 VRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRRNIFWRICLEKSGV 83
Query: 156 VILLGNDQCELGI 118
++LL N+ CELG+
Sbjct: 82 MVLLSNNDCELGL 44
Score = 79.4 bits (167), Expect(2) = 6e-022
Identities = 55/133 (41%), Positives = 63/133 (47%)
Frame = +2 / +3
Query: 122 PSSH*SLPRRITTLNFSFLESQIMFQPALLLTTKSVIQGTSISTCVHMLE*LGLPGQLTI 301
PSS L RR T +FS Q MF K I T STCV ML *L GQ
Sbjct: 48 PSSQSLLLRRTITPDFSRQIRQKMFLLVRWWINKCAIPRTLTSTCVRMLG*LARRGQRIT 227
Query: 302 TSCMTR*ASILMTCRSWCTRSLTCTKGAQQPYQLLLPSATPTLQPPRLGSS*SSTRCRRL 481
CM R AS + RS TR L CT+GA++ +Q LL T + R S*S CR L
Sbjct: 228 MFCMMRLASARTSSRSLSTRFLMCTRGARRRFQ*LLQ*RTRIWRRRRWAPS*SLRTCRTL 407
Query: 482 HLAMGGIPRRAAS 520
A G RR A+
Sbjct: 408 RRAREGATRRWAA 446
Score = 55.6 bits (115), Expect(2) = 3e-051
Identities = 24/35 (68%), Positives = 25/35 (71%)
Frame = -2 / -3
Query: 596 DTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
D A QQKNMELLTFSC RGSS T LP +V PP
Sbjct: 525 DNSRAHQQKNMELLTFSCSRGSSGTEALPTDVWPP 421
Score = 48.3 bits (99), Expect(2) = 3e-035
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = -1 / -2
Query: 588 PCCSAEEHGAPHFLMQTGQLLDRDAARRGMPP 493
P SAEEHGAPHFLMQ QL R AA R + P
Sbjct: 517 PSPSAEEHGAPHFLMQPRQLRHRGAAHRRVAP 422
Score = 46.9 bits (96), Expect(2) = 1e-071
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = +2 / +3
Query: 494 GGIPRRAASLSRSCPVCMRK*GAPCSSAEQQGMC 595
G R AA RSC CMRK*GAPCSSA+ G C
Sbjct: 423 GATRRWAAPRCRSCLGCMRK*GAPCSSADGLGCC 524
Score = 44.6 bits (91), Expect(2) = 6e-022
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +1 / +2
Query: 523 VQELPRLHEKVRSSMFFC*AA 585
V ELPRLHEKVRSSMFFC* A
Sbjct: 452 VPELPRLHEKVRSSMFFC*WA 514
>gb|BE195976.3|BE195976 HVSMEh0091A07f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091A07f, mRNA sequence
Length = 1009
Score = 243 bits (525), Expect(2) = 4e-071
Identities = 92/117 (78%), Positives = 106/117 (90%)
Frame = +1 / +1
Query: 121 PKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHY 300
PKFT+I+AQKNHHT+FF P+NVP GTVVD +VCHP+NFDFYMC+HAGMIGT+RPTHY
Sbjct: 103 PKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHY 282
Query: 301 HILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
H+LHDEIGF+ D+LQE VHSLSYVYQRSTTAISV API YAHLAAAQVG F+KF++M
Sbjct: 283 HVLHDEIGFSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDM 453
Score = 166 bits (358), Expect(2) = 2e-051
Identities = 82/126 (65%), Positives = 87/126 (69%)
Frame = -2 / -3
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLDEVSD+SSNFM PT AAAR A +GA T++AVVLLWY S LKPI
Sbjct: 479 PPWLDEVSDMSSNFMKVPTCAAARCAYAIGAATEIAVVLLWYT*ESEWTNSWSSSALKPI 300
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFWAM 138
SSCR * VGL VPIIPAC HM*KSKFLG T LSTTVP GT SG KNLV FF A
Sbjct: 299 SSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGGTFSGEFVWKNLV*WFF*AT 120
Query: 137 INVNLG 120
+ VNLG
Sbjct: 119 MTVNLG 102
Score = 120 bits (257), Expect(2) = 1e-034
Identities = 56/133 (42%), Positives = 86/133 (64%)
Frame = -1 / -2
Query: 516 AARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQV 337
A RR P +AR S+RH+++L+E +L ++ V S+ * APLVH+R+RV +LL++
Sbjct: 498 AHRRVAPSLARRSVRHVLKLHEGAHLRRRQMRVRYWSSY*NRRRAPLVHIRKRVDKLLEL 319
Query: 336 IRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNIIWLSRNEKFSV 157
+R EA L+MQ++++ WP NH SM THVE++V M +++ NI W EK V
Sbjct: 318 VRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRRNIFWRICLEKSGV 139
Query: 156 VILLGNDQCELGI 118
++LL N+ CELG+
Sbjct: 138 MVLLSNNDCELGL 100
Score = 78.0 bits (164), Expect(2) = 2e-021
Identities = 54/133 (40%), Positives = 63/133 (47%)
Frame = +2 / +2
Query: 122 PSSH*SLPRRITTLNFSFLESQIMFQPALLLTTKSVIQGTSISTCVHMLE*LGLPGQLTI 301
PSS L RR T +FS Q MF K I T STCV ML *L GQ
Sbjct: 104 PSSQSLLLRRTITPDFSRQIRQKMFLLVRWWINKCAIPRTLTSTCVRMLG*LARRGQRIT 283
Query: 302 TSCMTR*ASILMTCRSWCTRSLTCTKGAQQPYQLLLPSATPTLQPPRLGSS*SSTRCRRL 481
CM R AS + RS TR L CT+GA++ +Q LL T + + S*S CR L
Sbjct: 284 MFCMMRLASARTSSRSLSTRFLMCTRGARRRFQ*LLQ*RTRIWRRRKWAPS*SLRTCRTL 463
Query: 482 HLAMGGIPRRAAS 520
A G RR A+
Sbjct: 464 RRAREGATRRWAA 502
Score = 56.1 bits (116), Expect(2) = 2e-051
Identities = 24/35 (68%), Positives = 25/35 (71%)
Frame = -2 / -3
Query: 596 DTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
DT A QQKNMEL TFSC RGSS T LP +V PP
Sbjct: 581 DTSRAHQQKNMELFTFSCSRGSSGTEALPTDVWPP 477
Score = 46.0 bits (94), Expect(2) = 1e-034
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = -1 / -2
Query: 594 HIPCCSAEEHGAPHFLMQTGQLLDRDAARRGMPP 493
H P SAEEHGA HFLMQ QL R AA R + P
Sbjct: 579 HKPSPSAEEHGALHFLMQPRQLRHRGAAHRRVAP 478
Score = 45.5 bits (93), Expect(2) = 4e-071
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = +2 / +2
Query: 494 GGIPRRAASLSRSCPVCMRK*GAPCSSAEQQGMCPL 601
G R AA RSC CMRK* APCSSA+ G+C L
Sbjct: 479 GATRRWAAPRCRSCLGCMRK*RAPCSSADGLGLCRL 586
Score = 44.6 bits (91), Expect(2) = 2e-021
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +1 / +1
Query: 523 VQELPRLHEKVRSSMFFC*AAGNVS 597
V ELPRLHEKV+SSMFFC* A VS
Sbjct: 508 VPELPRLHEKVKSSMFFC*WARLVS 582
>gb|BU971417.1|BU971417 HB17I20r BC Hordeum vulgare subsp. vulgare cDNA clone HB17I20
5-PRIME, mRNA sequence
Length = 502
Score = 232 bits (501), Expect(2) = 9e-070
Identities = 91/103 (88%), Positives = 96/103 (93%)
Frame = +1 / +2
Query: 163 KFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDL 342
KFF+PG PDNVP GTVVDN VCHPRN+DFYMC+HAGMIGTTRPTHYHILHDEI F DDL
Sbjct: 11 KFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDL 190
Query: 343 QELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
Q+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 191 QDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 319
Score = 165 bits (354), Expect(2) = 1e-048
Identities = 79/113 (69%), Positives = 84/113 (74%)
Frame = -2 / -2
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 345 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 166
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLV 159
SSCR+ * VGLVVPIIPA HM*KS FLG QT LSTTVP GTLSG PGMKN +
Sbjct: 165 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMKNFL 7
Score = 160 bits (345), Expect(2) = 2e-044
Identities = 62/109 (56%), Positives = 85/109 (77%)
Frame = -1 / -1
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 340 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 161
Query: 312 MQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNIIWLSRNEK 166
MQD+++ WP PNHSSM HV++ +PWM D ++NNSA +I+ SR+EK
Sbjct: 160 MQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIVRRSRHEK 14
Score = 119 bits (254), Expect = 2e-026
Identities = 59/104 (56%), Positives = 69/104 (66%)
Frame = -3 / -3
Query: 478 SPTSRRTL*TAQPGRLQGGRSRWEQQLIWLLCSFGTRKRASAPAPAGHQD*SLSRHAGCD 299
S TS +TL*TA P +LQ SR E+QLI LLCSFGT KRA+A PAGH S+S HAG
Sbjct: 326 SRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGYG 147
Query: 298 SELAW*SQSFQHVNTCRNRSSLDDRLCCQQQCRLEHYLAFQE*K 167
+ LA SQSFQH TC++ +SLD R QQQC+ H Q *K
Sbjct: 146 NVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGHCQEIQA*K 15
Score = 101 bits (215), Expect(2) = 5e-025
Identities = 57/105 (54%), Positives = 59/105 (56%)
Frame = +2 / +3
Query: 164 NFSFLESQIMFQPALLLTTKSVIQGTSISTCVHMLE*LGLPGQLTITSCMTR*ASILMTC 343
+FS L+ M ALLL S IQG TC MLE*LG GQ SCM R MTC
Sbjct: 12 SFSCLDLLTMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCMMRYTLPRMTC 191
Query: 344 RSWCTRSLTCTKGAQQPYQLLLPSATPTLQPPRLGSS*SSTRCRR 478
R C RSL CTKGAQQ YQL L SA LQ R SS*S RC R
Sbjct: 192 RILCIRSLMCTKGAQQQYQLFLQSAMHILQLLRWRSS*SLMRCPR 326
Score = 51.9 bits (107), Expect(2) = 9e-070
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / +2
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 371 PVQELPRLHEKVRSSMFFC*A 433
Score = 48.7 bits (100), Expect(2) = 1e-048
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / -2
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 450 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 343
Score = 38.6 bits (78), Expect(2) = 2e-044
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / -1
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 430 SAEEHAAADFLMETRQLLHRAAGSRGV 350
Score = 33.1 bits (66), Expect(2) = 5e-025
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / +3
Query: 473 RRLHLAMGGIPRRAASLSRSCPVCMRK*GAPCSSAEQ 583
RR + P A+ RSC V MRK A CSSAE+
Sbjct: 324 RRRRARVVATPLLPAARCRSCLVSMRKSAAACSSAER 434
>gb|AV918379.1|AV918379 AV918379 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20n15 3', mRNA sequence
Length = 662
Score = 230 bits (496), Expect(2) = 4e-069
Identities = 90/102 (88%), Positives = 95/102 (93%)
Frame = +1 / -2
Query: 166 FFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQ 345
FF+PG PDNVP GTVVDN VCHPRN+DFYMC+HAGMIGTTRPTHYHILHDEI F DDLQ
Sbjct: 661 FFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQ 482
Query: 346 ELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 481 DLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 356
Score = 164 bits (353), Expect(2) = 2e-048
Identities = 79/111 (71%), Positives = 83/111 (74%)
Frame = -2 / +3
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 330 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 509
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKN 165
SSCR+ * VGLVVPIIPA HM*KS FLG QT LSTTVP GTLSG PGMKN
Sbjct: 510 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMKN 662
Score = 160 bits (345), Expect(2) = 2e-044
Identities = 62/109 (56%), Positives = 85/109 (77%)
Frame = -1 / +2
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 335 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 514
Query: 312 MQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNIIWLSRNEK 166
MQD+++ WP PNHSSM HV++ +PWM D ++NNSA +I+ SR+EK
Sbjct: 515 MQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIVRRSRHEK 661
Score = 119 bits (254), Expect = 2e-026
Identities = 59/104 (56%), Positives = 69/104 (66%)
Frame = -3 / +1
Query: 478 SPTSRRTL*TAQPGRLQGGRSRWEQQLIWLLCSFGTRKRASAPAPAGHQD*SLSRHAGCD 299
S TS +TL*TA P +LQ SR E+QLI LLCSFGT KRA+A PAGH S+S HAG
Sbjct: 349 SRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGYG 528
Query: 298 SELAW*SQSFQHVNTCRNRSSLDDRLCCQQQCRLEHYLAFQE*K 167
+ LA SQSFQH TC++ +SLD R QQQC+ H Q *K
Sbjct: 529 NVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGHCQEIQA*K 660
Score = 100 bits (214), Expect(2) = 6e-025
Identities = 57/104 (54%), Positives = 58/104 (55%)
Frame = +2 / -3
Query: 167 FSFLESQIMFQPALLLTTKSVIQGTSISTCVHMLE*LGLPGQLTITSCMTR*ASILMTCR 346
FS L+ M ALLL S IQG TC MLE*LG GQ SCM R MTCR
Sbjct: 660 FSCLDLLTMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCMMRYTLPRMTCR 481
Query: 347 SWCTRSLTCTKGAQQPYQLLLPSATPTLQPPRLGSS*SSTRCRR 478
C RSL CTKGAQQ YQL L SA LQ R SS*S RC R
Sbjct: 480 ILCIRSLMCTKGAQQQYQLFLQSAMHILQLLRWRSS*SLMRCPR 349
Score = 51.9 bits (107), Expect(2) = 4e-069
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -2
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 304 PVQELPRLHEKVRSSMFFC*A 242
Score = 48.7 bits (100), Expect(2) = 2e-048
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / +3
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 225 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 332
Score = 38.6 bits (78), Expect(2) = 2e-044
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +2
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 245 SAEEHAAADFLMETRQLLHRAAGSRGV 325
Score = 33.1 bits (66), Expect(2) = 6e-025
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / -3
Query: 473 RRLHLAMGGIPRRAASLSRSCPVCMRK*GAPCSSAEQ 583
RR + P A+ RSC V MRK A CSSAE+
Sbjct: 351 RRRRARVVATPLLPAARCRSCLVSMRKSAAACSSAER 241
>gb|AV918127.1|AV918127 AV918127 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17p11 3', mRNA sequence
Length = 702
Score = 227 bits (490), Expect(2) = 3e-068
Identities = 89/101 (88%), Positives = 94/101 (93%)
Frame = +1 / -3
Query: 169 FIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQE 348
F+PG PDNVP GTVVDN VCHPRN+DFYMC+HAGMIGTTRPTHYHILHDEI F DDLQ+
Sbjct: 700 FMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQD 521
Query: 349 LVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 520 LVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 398
Score = 161 bits (347), Expect(2) = 1e-047
Identities = 78/110 (70%), Positives = 82/110 (74%)
Frame = -2 / +3
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 372 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 551
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMK 168
SSCR+ * VGLVVPIIPA HM*KS FLG QT LSTTVP GTLSG PGMK
Sbjct: 552 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMK 701
Score = 158 bits (340), Expect(2) = 9e-044
Identities = 61/108 (56%), Positives = 84/108 (77%)
Frame = -1 / +2
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 377 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 556
Query: 312 MQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNIIWLSRNE 169
MQD+++ WP PNHSSM HV++ +PWM D ++NNSA +I+ SR+E
Sbjct: 557 MQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIVRRSRHE 700
Score = 119 bits (254), Expect = 2e-026
Identities = 59/104 (56%), Positives = 69/104 (66%)
Frame = -3 / +1
Query: 478 SPTSRRTL*TAQPGRLQGGRSRWEQQLIWLLCSFGTRKRASAPAPAGHQD*SLSRHAGCD 299
S TS +TL*TA P +LQ SR E+QLI LLCSFGT KRA+A PAGH S+S HAG
Sbjct: 391 SRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGYG 570
Query: 298 SELAW*SQSFQHVNTCRNRSSLDDRLCCQQQCRLEHYLAFQE*K 167
+ LA SQSFQH TC++ +SLD R QQQC+ H Q *K
Sbjct: 571 NVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGHCQEIQA*K 702
Score = 100 bits (214), Expect(2) = 6e-025
Identities = 57/104 (54%), Positives = 58/104 (55%)
Frame = +2 / -1
Query: 167 FSFLESQIMFQPALLLTTKSVIQGTSISTCVHMLE*LGLPGQLTITSCMTR*ASILMTCR 346
FS L+ M ALLL S IQG TC MLE*LG GQ SCM R MTCR
Sbjct: 702 FSCLDLLTMSLLALLLIMLSAIQGIMTFTCALMLE*LGQQGQHITISCMMRYTLPRMTCR 523
Query: 347 SWCTRSLTCTKGAQQPYQLLLPSATPTLQPPRLGSS*SSTRCRR 478
C RSL CTKGAQQ YQL L SA LQ R SS*S RC R
Sbjct: 522 ILCIRSLMCTKGAQQQYQLFLQSAMHILQLLRWRSS*SLMRCPR 391
Score = 51.9 bits (107), Expect(2) = 3e-068
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -3
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 346 PVQELPRLHEKVRSSMFFC*A 284
Score = 48.7 bits (100), Expect(2) = 1e-047
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / +3
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 267 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 374
Score = 38.6 bits (78), Expect(2) = 9e-044
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +2
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 287 SAEEHAAADFLMETRQLLHRAAGSRGV 367
Score = 33.1 bits (66), Expect(2) = 6e-025
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / -1
Query: 473 RRLHLAMGGIPRRAASLSRSCPVCMRK*GAPCSSAEQ 583
RR + P A+ RSC V MRK A CSSAE+
Sbjct: 393 RRRRARVVATPLLPAARCRSCLVSMRKSAAACSSAER 283
>gb|BQ462861.1|BQ462861 HI02D22r HI Hordeum vulgare subsp. vulgare cDNA clone HI02D22
5-PRIME, mRNA sequence
Length = 615
Score = 255 bits (552), Expect = 2e-067
Identities = 104/153 (67%), Positives = 117/153 (76%)
Frame = +1 / +1
Query: 121 PKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHY 300
PK T+IIAQKNHHTK F PDNVPAGTVVD+ + HP+ +DFYMC+HAG IGT+RPTHY
Sbjct: 70 PKITVIIAQKNHHTKLFQADAPDNVPAGTVVDSGIVHPKQYDFYMCAHAGPIGTSRPTHY 249
Query: 301 HILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEMXXX 480
H+L D+IGF PD+LQ+LV SLSYVYQRSTTAISVVAPICYAHLAAAQ+ QFIKF+E
Sbjct: 250 HVLLDQIGFTPDELQKLVLSLSYVYQRSTTAISVVAPICYAHLAAAQMSQFIKFEEFADT 429
Query: 481 XXXXXXXXXXXXVPVQELPRLHEKVRSSMFFC* 579
V ELPRLH V SSMFFC*
Sbjct: 430 SSGSGVPSSSTAATVPELPRLHSDVCSSMFFC* 528
Score = 153 bits (329), Expect = 1e-036
Identities = 86/153 (56%), Positives = 94/153 (61%)
Frame = -2 / -2
Query: 578 QQKNMELLTFSCRRGSSWTGTLPAEVCPPWLDEVSDISSNFMNCPTWAAARWA*QMGATT 399
QQKN+EL T C RGSS T + P DEVS SSNFMN AAAR A*Q+GATT
Sbjct: 527 QQKNIELQTSECSRGSSGTVAAVDDEGTPLPDEVSANSSNFMNWLICAAARCA*QIGATT 348
Query: 398 DMAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QTL 219
D+AVVLLWY SG+KPI S + ** VGL VPI PA HM*KS G*
Sbjct: 347 DIAVVLLWYT*ESERTSFWSSSGVKPI*SSKT**WVGLEVPIGPA*AHM*KSYCFG*TIP 168
Query: 218 LSTTVPAGTLSGFPGMKNLVW*FFWAMINVNLG 120
STTVPAGTLSG + VW*FF A+I V G
Sbjct: 167 ESTTVPAGTLSGASAWNSFVW*FF*AIITVIFG 69
Score = 104 bits (222), Expect = 6e-022
Identities = 54/121 (44%), Positives = 71/121 (58%)
Frame = -1 / -1
Query: 486 R*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLVMQ 307
R*S+ L+E YEL +L CKV V D ++ Y APLVH+ +R + L+ I E L+ Q
Sbjct: 435 R*SISKLLEFYELAHLRCCKVRVTDRCHHRYCSGAPLVHIGKRKN*FLEFIWCETNLIKQ 256
Query: 306 DVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNIIWLSRNEKFSVVILLGNDQCE 127
D+I+ P S M THVEI + M + V+ S WNIIW E+F VVILL N+ C
Sbjct: 255 DMIMGGP*GAYRSRMSTHVEIILFRMNNTRVHYSPSWNIIWCISLEQFRVVILLSNNNCN 76
Query: 126 L 124
L
Sbjct: 75 L 73
>gb|BF629097.2|BF629097 HVSMEb0009N21f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009N21f, mRNA sequence
Length = 727
Score = 240 bits (518), Expect(2) = 6e-066
Identities = 90/117 (76%), Positives = 105/117 (89%)
Frame = +1 / +2
Query: 121 PKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHY 300
PKFT+I+AQKNHHT+FF P+NVP GTVVD +VCHP+NFDFYMC+HAGMIGT+RPTHY
Sbjct: 266 PKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHY 445
Query: 301 HILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
H+LHDEIGF+ D+LQE VHSLSYVYQRSTTAISV API YAH+AAA VG F+KF++M
Sbjct: 446 HVLHDEIGFSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHMAAAHVGTFMKFEDM 616
Score = 163 bits (350), Expect(2) = 3e-047
Identities = 81/126 (64%), Positives = 86/126 (68%)
Frame = -2 / -2
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLDEVSD+SSNFM PT AAA A +GA T++AVVLLWY S LKPI
Sbjct: 642 PPWLDEVSDMSSNFMKVPTCAAAICAYAIGAATEIAVVLLWYT*ESECTNSWSSSALKPI 463
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFWAM 138
SSCR * VGL VPIIPAC HM*KSKFLG T LSTTVP GT SG KNLV FF A
Sbjct: 462 SSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGGTFSGEFVWKNLV*WFF*AT 283
Query: 137 INVNLG 120
+ VNLG
Sbjct: 282 MTVNLG 265
Score = 107 bits (228), Expect(3) = 9e-030
Identities = 42/89 (47%), Positives = 62/89 (69%)
Frame = -1 / -1
Query: 384 APLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNS 205
APLVH+R+RVH+LL+++R EA L+MQ++++ WP NH SM THVE++V M +++
Sbjct: 529 APLVHIRKRVHKLLELVRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHR 350
Query: 204 AGWNIIWLSRNEKFSVVILLGNDQCELGI 118
NI W EK V++LL N+ CELG+
Sbjct: 349 TRRNIFWRICLEKSGVMVLLSNNDCELGL 263
Score = 46.0 bits (94), Expect(2) = 3e-047
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -2 / -2
Query: 578 QQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
QQKNM+L+TFSC SS T LP +V PP
Sbjct: 726 QQKNMKLITFSCSEASSGTEALPTDVWPP 640
Score = 32.2 bits (64), Expect(3) = 9e-030
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -1 / -1
Query: 576 AEEHGAPHFLMQTGQLLDRDAARRGMPP 493
AEEH A HF MQ G L AA R + P
Sbjct: 724 AEEHEAHHFFMQRGXLRH*GAAHRRVAP 641
Score = 31.3 bits (62), Expect(2) = 6e-066
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2 / +3
Query: 494 GGIPRRAASLSRSCPVCMRK*GAPCSSA 577
G R AA RS P CM+K* A CSSA
Sbjct: 642 GATRRWAAPQCRSXPRCMKK**ASCSSA 725
Score = 28.6 bits (56), Expect(3) = 9e-030
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -1 / -1
Query: 516 AARRGMPPMAR*SLRHLVELYE 451
A RR P MAR S+RH+++L+E
Sbjct: 661 AHRRVAPSMARRSVRHVLKLHE 596
>gb|CB876294.1|CB876294 HX10N18w HX Hordeum vulgare subsp. vulgare cDNA clone HX10N18
3-PRIME, mRNA sequence
Length = 676
Score = 215 bits (464), Expect(2) = 1e-064
Identities = 85/96 (88%), Positives = 89/96 (92%)
Frame = +1 / -1
Query: 184 PDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSL 363
PDNVP GTVVDN VCHPRN+DFYMC+HAGMIGTT PTHYHILHDEI F DDLQ+LVHSL
Sbjct: 676 PDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTXPTHYHILHDEIHFAADDLQDLVHSL 497
Query: 364 SYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
SYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 496 SYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 389
Score = 149 bits (321), Expect(2) = 4e-041
Identities = 57/102 (55%), Positives = 79/102 (77%)
Frame = -1 / +2
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 368 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 547
Query: 312 MQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNII 187
MQD+++ W PNHSSM HV++ +PWM D ++NNSA +I+
Sbjct: 548 MQDMVMCWXCCPNHSSMSAHVKVIIPWMADSIINNSARRDIV 673
Score = 149 bits (321), Expect(2) = 4e-044
Identities = 73/104 (70%), Positives = 77/104 (74%)
Frame = -2 / +3
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 363 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 542
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLS 186
SSCR+ * VGLVVPIIPA HM*KS FLG QT LSTTVP GTLS
Sbjct: 543 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLS 674
Score = 115 bits (245), Expect = 4e-025
Identities = 55/96 (57%), Positives = 65/96 (67%)
Frame = -3 / +1
Query: 478 SPTSRRTL*TAQPGRLQGGRSRWEQQLIWLLCSFGTRKRASAPAPAGHQD*SLSRHAGCD 299
S TS +TL*TA P +LQ SR E+QLI LLCSFGT KRA+A PAGH S+S HAG
Sbjct: 382 SRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGYG 561
Query: 298 SELAW*SQSFQHVNTCRNRSSLDDRLCCQQQCRLEH 191
+ L SQSFQH TC++ +SLD R QQQC+ H
Sbjct: 562 NVLXLLSQSFQHERTCKSHNSLDGRQHYQQQCQEGH 669
Score = 96.4 bits (204), Expect(2) = 1e-023
Identities = 46/86 (53%), Positives = 53/86 (61%)
Frame = +3 / -3
Query: 234 KELRFLHVFTCWNDWDYQANSLSHPA*RDRLQS**PXXXXXXXXXRVPKEHNSHISCCSH 413
KEL LHV +CWNDWD + N+L +PA* D L *P VPKEHNS+ISC S+
Sbjct: 626 KEL*LLHVRSCWNDWDNKXNTLPYPA**DTLCRG*PAGSCAFALLCVPKEHNSNISCFSN 447
Query: 414 LLRPPCSRPGWAVHKVRRDVGDFI*P 491
LL CS G AVHKV DV D + P
Sbjct: 446 LLCTSCSCSGGAVHKV**DVRDVVEP 369
Score = 51.9 bits (107), Expect(2) = 1e-064
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 337 PVQELPRLHEKVRSSMFFC*A 275
Score = 48.7 bits (100), Expect(2) = 4e-044
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / +3
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 258 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 365
Score = 38.6 bits (78), Expect(2) = 4e-041
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +2
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 278 SAEEHAAADFLMETRQLLHRAAGSRGV 358
Score = 33.1 bits (66), Expect(2) = 1e-023
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / -2
Query: 473 RRLHLAMGGIPRRAASLSRSCPVCMRK*GAPCSSAEQ 583
RR + P A+ RSC V MRK A CSSAE+
Sbjct: 384 RRRRARVVATPLLPAARCRSCLVSMRKSAAACSSAER 274
>gb|CB875735.1|CB875735 HX09D06w HX Hordeum vulgare subsp. vulgare cDNA clone HX09D06
3-PRIME, mRNA sequence
Length = 674
Score = 215 bits (463), Expect(2) = 1e-064
Identities = 85/95 (89%), Positives = 89/95 (93%)
Frame = +1 / -1
Query: 187 DNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLS 366
DNVP GTVVDN VCHPRN+DFYMC+HAGMIGTTRPTHYHILHDEI F DDLQ+LVHSLS
Sbjct: 674 DNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLS 495
Query: 367 YVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
YVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 494 YVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 390
Score = 154 bits (330), Expect(2) = 2e-045
Identities = 58/102 (56%), Positives = 80/102 (78%)
Frame = -1 / +3
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 369 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 548
Query: 312 MQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNII 187
MQD+++ WP PNHSSM HV++ +PWM D ++NNSA +I+
Sbjct: 549 MQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIV 674
Score = 148 bits (317), Expect(2) = 1e-040
Identities = 72/103 (69%), Positives = 76/103 (73%)
Frame = -2 / +1
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 364 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 543
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTL 189
SSCR+ * VGLVVPIIPA HM*KS FLG QT LSTTVP GTL
Sbjct: 544 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTL 672
Score = 116 bits (249), Expect = 1e-025
Identities = 56/96 (58%), Positives = 66/96 (68%)
Frame = -3 / +2
Query: 478 SPTSRRTL*TAQPGRLQGGRSRWEQQLIWLLCSFGTRKRASAPAPAGHQD*SLSRHAGCD 299
S TS +TL*TA P +LQ SR E+QLI LLCSFGT KRA+A PAGH S+S HAG
Sbjct: 383 SRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGYG 562
Query: 298 SELAW*SQSFQHVNTCRNRSSLDDRLCCQQQCRLEH 191
+ LA SQSFQH TC++ +SLD R QQQC+ H
Sbjct: 563 NVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGH 670
Score = 98.2 bits (208), Expect(2) = 4e-024
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = +3 / -3
Query: 234 KELRFLHVFTCWNDWDYQANSLSHPA*RDRLQS**PXXXXXXXXXRVPKEHNSHISCCSH 413
KEL LHV +CWNDWD +AN+L +PA* D L *P VPKEHNS+ISC S+
Sbjct: 627 KEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLCVPKEHNSNISCFSN 448
Query: 414 LLRPPCSRPGWAVHKVRRDVGDFI*P 491
LL CS G AVHKV DV D + P
Sbjct: 447 LLCTSCSCSGGAVHKV**DVRDVVEP 370
Score = 51.9 bits (107), Expect(2) = 1e-064
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 338 PVQELPRLHEKVRSSMFFC*A 276
Score = 48.7 bits (100), Expect(2) = 2e-045
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / +1
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 259 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 366
Score = 38.6 bits (78), Expect(2) = 1e-040
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +3
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 279 SAEEHAAADFLMETRQLLHRAAGSRGV 359
Score = 33.1 bits (66), Expect(2) = 4e-024
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / -2
Query: 473 RRLHLAMGGIPRRAASLSRSCPVCMRK*GAPCSSAEQ 583
RR + P A+ RSC V MRK A CSSAE+
Sbjct: 385 RRRRARVVATPLLPAARCRSCLVSMRKSAAACSSAER 275
>gb|CB874380.1|CB874380 HX05B15w HX Hordeum vulgare subsp. vulgare cDNA clone HX05B15
3-PRIME, mRNA sequence
Length = 626
Score = 215 bits (463), Expect(2) = 1e-064
Identities = 85/95 (89%), Positives = 89/95 (93%)
Frame = +1 / -1
Query: 187 DNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLS 366
DNVP GTVVDN VCHPRN+DFYMC+HAGMIGTTRPTHYHILHDEI F DDLQ+LVHSLS
Sbjct: 626 DNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLS 447
Query: 367 YVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
YVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 446 YVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 342
Score = 154 bits (330), Expect(2) = 2e-045
Identities = 58/102 (56%), Positives = 80/102 (78%)
Frame = -1 / +3
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 321 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 500
Query: 312 MQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNII 187
MQD+++ WP PNHSSM HV++ +PWM D ++NNSA +I+
Sbjct: 501 MQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIV 626
Score = 148 bits (317), Expect(2) = 1e-040
Identities = 72/103 (69%), Positives = 76/103 (73%)
Frame = -2 / +1
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 316 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 495
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTL 189
SSCR+ * VGLVVPIIPA HM*KS FLG QT LSTTVP GTL
Sbjct: 496 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTL 624
Score = 116 bits (249), Expect = 1e-025
Identities = 56/96 (58%), Positives = 66/96 (68%)
Frame = -3 / +2
Query: 478 SPTSRRTL*TAQPGRLQGGRSRWEQQLIWLLCSFGTRKRASAPAPAGHQD*SLSRHAGCD 299
S TS +TL*TA P +LQ SR E+QLI LLCSFGT KRA+A PAGH S+S HAG
Sbjct: 335 SRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGYG 514
Query: 298 SELAW*SQSFQHVNTCRNRSSLDDRLCCQQQCRLEH 191
+ LA SQSFQH TC++ +SLD R QQQC+ H
Sbjct: 515 NVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGH 622
Score = 98.2 bits (208), Expect(2) = 4e-024
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = +3 / -3
Query: 234 KELRFLHVFTCWNDWDYQANSLSHPA*RDRLQS**PXXXXXXXXXRVPKEHNSHISCCSH 413
KEL LHV +CWNDWD +AN+L +PA* D L *P VPKEHNS+ISC S+
Sbjct: 579 KEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLCVPKEHNSNISCFSN 400
Query: 414 LLRPPCSRPGWAVHKVRRDVGDFI*P 491
LL CS G AVHKV DV D + P
Sbjct: 399 LLCTSCSCSGGAVHKV**DVRDVVEP 322
Score = 51.9 bits (107), Expect(2) = 1e-064
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 290 PVQELPRLHEKVRSSMFFC*A 228
Score = 48.7 bits (100), Expect(2) = 2e-045
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / +1
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 211 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 318
Score = 38.6 bits (78), Expect(2) = 1e-040
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +3
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 231 SAEEHAAADFLMETRQLLHRAAGSRGV 311
Score = 33.1 bits (66), Expect(2) = 4e-024
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / -2
Query: 473 RRLHLAMGGIPRRAASLSRSCPVCMRK*GAPCSSAEQ 583
RR + P A+ RSC V MRK A CSSAE+
Sbjct: 337 RRRRARVVATPLLPAARCRSCLVSMRKSAAACSSAER 227
>gb|CB875995.1|CB875995 HX09P10w HX Hordeum vulgare subsp. vulgare cDNA clone HX09P10
3-PRIME, mRNA sequence
Length = 626
Score = 215 bits (463), Expect(2) = 1e-064
Identities = 85/95 (89%), Positives = 89/95 (93%)
Frame = +1 / -1
Query: 187 DNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLS 366
DNVP GTVVDN VCHPRN+DFYMC+HAGMIGTTRPTHYHILHDEI F DDLQ+LVHSLS
Sbjct: 626 DNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLS 447
Query: 367 YVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
YVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 446 YVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 342
Score = 154 bits (330), Expect(2) = 2e-045
Identities = 58/102 (56%), Positives = 80/102 (78%)
Frame = -1 / +3
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 321 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 500
Query: 312 MQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNII 187
MQD+++ WP PNHSSM HV++ +PWM D ++NNSA +I+
Sbjct: 501 MQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIV 626
Score = 148 bits (317), Expect(2) = 1e-040
Identities = 72/103 (69%), Positives = 76/103 (73%)
Frame = -2 / +1
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 316 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 495
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTL 189
SSCR+ * VGLVVPIIPA HM*KS FLG QT LSTTVP GTL
Sbjct: 496 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTL 624
Score = 116 bits (249), Expect = 1e-025
Identities = 56/96 (58%), Positives = 66/96 (68%)
Frame = -3 / +2
Query: 478 SPTSRRTL*TAQPGRLQGGRSRWEQQLIWLLCSFGTRKRASAPAPAGHQD*SLSRHAGCD 299
S TS +TL*TA P +LQ SR E+QLI LLCSFGT KRA+A PAGH S+S HAG
Sbjct: 335 SRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGYG 514
Query: 298 SELAW*SQSFQHVNTCRNRSSLDDRLCCQQQCRLEH 191
+ LA SQSFQH TC++ +SLD R QQQC+ H
Sbjct: 515 NVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQEGH 622
Score = 98.2 bits (208), Expect(2) = 4e-024
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = +3 / -3
Query: 234 KELRFLHVFTCWNDWDYQANSLSHPA*RDRLQS**PXXXXXXXXXRVPKEHNSHISCCSH 413
KEL LHV +CWNDWD +AN+L +PA* D L *P VPKEHNS+ISC S+
Sbjct: 579 KEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLCVPKEHNSNISCFSN 400
Query: 414 LLRPPCSRPGWAVHKVRRDVGDFI*P 491
LL CS G AVHKV DV D + P
Sbjct: 399 LLCTSCSCSGGAVHKV**DVRDVVEP 322
Score = 51.9 bits (107), Expect(2) = 1e-064
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 290 PVQELPRLHEKVRSSMFFC*A 228
Score = 48.7 bits (100), Expect(2) = 2e-045
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / +1
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 211 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 318
Score = 38.6 bits (78), Expect(2) = 1e-040
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +3
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 231 SAEEHAAADFLMETRQLLHRAAGSRGV 311
Score = 33.1 bits (66), Expect(2) = 4e-024
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / -2
Query: 473 RRLHLAMGGIPRRAASLSRSCPVCMRK*GAPCSSAEQ 583
RR + P A+ RSC V MRK A CSSAE+
Sbjct: 337 RRRRARVVATPLLPAARCRSCLVSMRKSAAACSSAER 227
>gb|BU974279.1|BU974279 HB27H05r BC Hordeum vulgare subsp. vulgare cDNA clone HB27H05
5-PRIME, mRNA sequence
Length = 461
Score = 243 bits (525), Expect = 1e-063
Identities = 92/117 (78%), Positives = 106/117 (90%)
Frame = +1 / +1
Query: 121 PKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHY 300
PKFT+I+AQKNHHT+FF P+NVP GTVVD +VCHP+NFDFYMC+HAGMIGT+RPTHY
Sbjct: 94 PKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHY 273
Query: 301 HILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
H+LHDEIGF+ D+LQE VHSLSYVYQRSTTAISV API YAHLAAAQVG F+KF++M
Sbjct: 274 HVLHDEIGFSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDM 444
Score = 155 bits (333), Expect = 3e-037
Identities = 79/123 (64%), Positives = 84/123 (68%)
Frame = -2 / -1
Query: 488 LDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPISSC 309
LDEVSD+SSNFM PT AAAR A +GA T++AVVLLWY S LKPISSC
Sbjct: 461 LDEVSDMSSNFMKVPTCAAARCAYAIGAATEIAVVLLWYT*ESEWTNSWSSSALKPISSC 282
Query: 308 RM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFWAMINV 129
R * VGL VPIIPAC HM*KSKFLG T LSTTVP GT SG KNLV FF A + V
Sbjct: 281 RTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGGTFSGEFVWKNLV*WFF*ATMTV 102
Query: 128 NLG 120
NLG
Sbjct: 101 NLG 93
Score = 111 bits (237), Expect = 5e-024
Identities = 51/123 (41%), Positives = 80/123 (65%)
Frame = -1 / -3
Query: 486 R*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLVMQ 307
R S+RH+++L+E +L ++ V S+ * APLVH+R+RV +LL+++R EA L+MQ
Sbjct: 459 RRSVRHVLKLHEGAHLRRRQMRVRYWSSY*NRRRAPLVHIRKRVDKLLELVRAEANLIMQ 280
Query: 306 DVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNIIWLSRNEKFSVVILLGNDQCE 127
++++ WP NH SM THVE++V M +++ NI W EK V++LL N+ CE
Sbjct: 279 NMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRRNIFWRICLEKSGVMVLLSNNDCE 100
Query: 126 LGI 118
LG+
Sbjct: 99 LGL 91
>gb|BU985772.1|BU985772 HF08J07r HF Hordeum vulgare subsp. vulgare cDNA clone HF08J07
5-PRIME, mRNA sequence
Length = 493
Score = 243 bits (525), Expect = 1e-063
Identities = 92/117 (78%), Positives = 106/117 (90%)
Frame = +1 / +1
Query: 121 PKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHY 300
PKFT+I+AQKNHHT+FF P+NVP GTVVD +VCHP+NFDFYMC+HAGMIGT+RPTHY
Sbjct: 79 PKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHY 258
Query: 301 HILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
H+LHDEIGF+ D+LQE VHSLSYVYQRSTTAISV API YAHLAAAQVG F+KF++M
Sbjct: 259 HVLHDEIGFSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDM 429
Score = 166 bits (358), Expect = 1e-040
Identities = 82/126 (65%), Positives = 87/126 (69%)
Frame = -2 / -3
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLDEVSD+SSNFM PT AAAR A +GA T++AVVLLWY S LKPI
Sbjct: 455 PPWLDEVSDMSSNFMKVPTCAAARCAYAIGAATEIAVVLLWYT*ESEWTNSWSSSALKPI 276
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFWAM 138
SSCR * VGL VPIIPAC HM*KSKFLG T LSTTVP GT SG KNLV FF A
Sbjct: 275 SSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGGTFSGEFVWKNLV*WFF*AT 96
Query: 137 INVNLG 120
+ VNLG
Sbjct: 95 MTVNLG 78
Score = 120 bits (257), Expect = 9e-027
Identities = 56/133 (42%), Positives = 86/133 (64%)
Frame = -1 / -2
Query: 516 AARRGMPPMAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQV 337
A RR P +AR S+RH+++L+E +L ++ V S+ * APLVH+R+RV +LL++
Sbjct: 474 AHRRVAPSLARRSVRHVLKLHEGAHLRRRQMRVRYWSSY*NRRRAPLVHIRKRVDKLLEL 295
Query: 336 IRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNIIWLSRNEKFSV 157
+R EA L+MQ++++ WP NH SM THVE++V M +++ NI W EK V
Sbjct: 294 VRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRRNIFWRICLEKSGV 115
Query: 156 VILLGNDQCELGI 118
++LL N+ CELG+
Sbjct: 114 MVLLSNNDCELGL 76
>gb|AV918025.1|AV918025 AV918025 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17h21 3', mRNA sequence
Length = 653
Score = 204 bits (441), Expect(2) = 1e-061
Identities = 81/90 (90%), Positives = 85/90 (94%)
Frame = +1 / -2
Query: 202 GTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQR 381
GTVVDN VCHPRN+DFYMC+HAGMIGTTRPTHYHILHDEI F DDLQ+LVHSLSYVYQR
Sbjct: 649 GTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSYVYQR 470
Query: 382 STTAISVVAPICYAHLAAAQVGQFIKFDEM 471
STTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 469 STTAISVVSPICYAHLAAAQVAQFIKFDEM 380
Score = 152 bits (327), Expect(2) = 5e-045
Identities = 57/97 (58%), Positives = 77/97 (79%)
Frame = -1 / +2
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 359 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 538
Query: 312 MQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSA 202
MQD+++ WP PNHSSM HV++ +PWM D ++NNSA
Sbjct: 539 MQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSA 649
Score = 141 bits (302), Expect(2) = 1e-038
Identities = 69/99 (69%), Positives = 73/99 (73%)
Frame = -2 / +3
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 354 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 533
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVP 201
SSCR+ * VGLVVPIIPA HM*KS FLG QT LSTTVP
Sbjct: 534 SSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVP 650
Score = 115 bits (246), Expect = 3e-025
Identities = 55/93 (59%), Positives = 65/93 (69%)
Frame = -3 / +1
Query: 478 SPTSRRTL*TAQPGRLQGGRSRWEQQLIWLLCSFGTRKRASAPAPAGHQD*SLSRHAGCD 299
S TS +TL*TA P +LQ SR E+QLI LLCSFGT KRA+A PAGH S+S HAG
Sbjct: 373 SRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGYG 552
Query: 298 SELAW*SQSFQHVNTCRNRSSLDDRLCCQQQCR 200
+ LA SQSFQH TC++ +SLD R QQQC+
Sbjct: 553 NVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQ 651
Score = 98.2 bits (208), Expect(2) = 4e-024
Identities = 47/86 (54%), Positives = 54/86 (62%)
Frame = +3 / -1
Query: 234 KELRFLHVFTCWNDWDYQANSLSHPA*RDRLQS**PXXXXXXXXXRVPKEHNSHISCCSH 413
KEL LHV +CWNDWD +AN+L +PA* D L *P VPKEHNS+ISC S+
Sbjct: 617 KEL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLCVPKEHNSNISCFSN 438
Query: 414 LLRPPCSRPGWAVHKVRRDVGDFI*P 491
LL CS G AVHKV DV D + P
Sbjct: 437 LLCTSCSCSGGAVHKV**DVRDVVEP 360
Score = 51.9 bits (107), Expect(2) = 1e-061
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -2
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 328 PVQELPRLHEKVRSSMFFC*A 266
Score = 48.7 bits (100), Expect(2) = 5e-045
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / +3
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 249 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 356
Score = 38.6 bits (78), Expect(2) = 1e-038
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +2
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 269 SAEEHAAADFLMETRQLLHRAAGSRGV 349
Score = 33.1 bits (66), Expect(2) = 4e-024
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / -3
Query: 473 RRLHLAMGGIPRRAASLSRSCPVCMRK*GAPCSSAEQ 583
RR + P A+ RSC V MRK A CSSAE+
Sbjct: 375 RRRRARVVATPLLPAARCRSCLVSMRKSAAACSSAER 265
>gb|BQ472674.1|BQ472674 HB01M23r BC Hordeum vulgare subsp. vulgare cDNA clone HB01M23
5-PRIME, mRNA sequence
Length = 581
Score = 178 bits (383), Expect(2) = 1e-053
Identities = 71/79 (89%), Positives = 75/79 (94%)
Frame = +1 / -1
Query: 235 RNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPI 414
RN+DFYMC+HAGMIGTTRPTHYHILHDEI F DDLQ+LVHSLSYVYQRSTTAISVV+PI
Sbjct: 581 RNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPI 402
Query: 415 CYAHLAAAQVGQFIKFDEM 471
CYAHLAAAQV QFIKFDEM
Sbjct: 401 CYAHLAAAQVAQFIKFDEM 345
Score = 131 bits (281), Expect(2) = 1e-038
Identities = 50/86 (58%), Positives = 68/86 (79%)
Frame = -1 / +3
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 324 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 503
Query: 312 MQDVIVSWPGSPNHSSM*THVEIEVP 235
MQD+++ WP PNHSSM HV++ +P
Sbjct: 504 MQDMVMCWPCCPNHSSMSAHVKVIIP 581
Score = 121 bits (258), Expect(2) = 1e-032
Identities = 59/87 (67%), Positives = 63/87 (72%)
Frame = -2 / +1
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 319 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 498
Query: 317 SSCRM***VGLVVPIIPACEHM*KSKF 237
SSCR+ * VGLVVPIIPA HM*KS F
Sbjct: 499 SSCRIW*CVGLVVPIIPA*AHM*KS*F 579
Score = 100 bits (214), Expect = 8e-021
Identities = 48/81 (59%), Positives = 57/81 (70%)
Frame = -3 / +2
Query: 478 SPTSRRTL*TAQPGRLQGGRSRWEQQLIWLLCSFGTRKRASAPAPAGHQD*SLSRHAGCD 299
S TS +TL*TA P +LQ SR E+QLI LLCSFGT KRA+A PAGH S+S HAG
Sbjct: 338 SRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSFGTHKRANAQDPAGHPRQSVSHHAGYG 517
Query: 298 SELAW*SQSFQHVNTCRNRSS 236
+ LA SQSFQH TC++ +S
Sbjct: 518 NVLALLSQSFQHERTCKSHNS 580
Score = 95.9 bits (203), Expect(2) = 2e-023
Identities = 46/85 (54%), Positives = 53/85 (62%)
Frame = +3 / -3
Query: 237 ELRFLHVFTCWNDWDYQANSLSHPA*RDRLQS**PXXXXXXXXXRVPKEHNSHISCCSHL 416
EL LHV +CWNDWD +AN+L +PA* D L *P VPKEHNS+ISC S+L
Sbjct: 579 EL*LLHVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLCVPKEHNSNISCFSNL 400
Query: 417 LRPPCSRPGWAVHKVRRDVGDFI*P 491
L CS G AVHKV DV D + P
Sbjct: 399 LCTSCSCSGGAVHKV**DVRDVVEP 325
Score = 51.9 bits (107), Expect(2) = 1e-053
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 293 PVQELPRLHEKVRSSMFFC*A 231
Score = 48.7 bits (100), Expect(2) = 1e-038
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / +1
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 214 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 321
Score = 38.6 bits (78), Expect(2) = 1e-032
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +3
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 234 SAEEHAAADFLMETRQLLHRAAGSRGV 314
Score = 33.1 bits (66), Expect(2) = 2e-023
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / -2
Query: 473 RRLHLAMGGIPRRAASLSRSCPVCMRK*GAPCSSAEQ 583
RR + P A+ RSC V MRK A CSSAE+
Sbjct: 340 RRRRARVVATPLLPAARCRSCLVSMRKSAAACSSAER 230
>gb|BU969648.1|BU969648 HB12C12r BC Hordeum vulgare subsp. vulgare cDNA clone HB12C12
5-PRIME, mRNA sequence
Length = 471
Score = 201 bits (434), Expect = 4e-051
Identities = 75/94 (79%), Positives = 86/94 (91%)
Frame = +1 / +2
Query: 121 PKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHY 300
PKFT+I+AQKNHHT+FF P+NVP GTVVD +VCHP+NFDFYMC+HAGMIGT+RPTHY
Sbjct: 188 PKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHY 367
Query: 301 HILHDEIGFNPDDLQELVHSLSYVYQRSTTAISV 402
H+LHDEIGF+ D+LQE VHSLSYVYQRSTTAISV
Sbjct: 368 HVLHDEIGFSADELQEFVHSLSYVYQRSTTAISV 469
Score = 114 bits (244), Expect = 6e-025
Identities = 59/94 (62%), Positives = 62/94 (65%)
Frame = -2 / -1
Query: 401 TDMAVVLLWYXXXXXXXXXXXXSGLKPISSCRM***VGLVVPIIPACEHM*KSKFLG*QT 222
T++AVVLLWY S LKPISSCR * VGL VPIIPAC HM*KSKFLG T
Sbjct: 468 TEIAVVLLWYT*ESEWTNSWSSSALKPISSCRTW*CVGLDVPIIPACAHM*KSKFLGWHT 289
Query: 221 LLSTTVPAGTLSGFPGMKNLVW*FFWAMINVNLG 120
LSTTVP GT SG KNLV FF A + VNLG
Sbjct: 288 CLSTTVPGGTFSGEFVWKNLV*WFF*ATMTVNLG 187
Score = 103 bits (219), Expect = 2e-021
Identities = 41/89 (46%), Positives = 61/89 (68%)
Frame = -1 / -3
Query: 384 APLVHVRERVHQLLQVIRIEAYLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNS 205
APLVH+R+RV +LL+++R EA L+MQ++++ WP NH SM THVE++V M +++
Sbjct: 451 APLVHIRKRVDKLLELVRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHR 272
Query: 204 AGWNIIWLSRNEKFSVVILLGNDQCELGI 118
NI W EK V++LL N+ CELG+
Sbjct: 271 TRRNIFWRICLEKSGVMVLLSNNDCELGL 185
>gb|AV931339.1|AV931339 AV931339 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19h01 3', mRNA sequence
Length = 607
Score = 166 bits (357), Expect(2) = 5e-050
Identities = 67/74 (90%), Positives = 70/74 (94%)
Frame = +1 / -1
Query: 250 YMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHL 429
YMC+HAGMIGTTRPTHYHILHDEI F DDLQ+LVHSLSYVYQRSTTAISVV+PICYAHL
Sbjct: 607 YMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHL 428
Query: 430 AAAQVGQFIKFDEM 471
AAAQV QFIKFDEM
Sbjct: 427 AAAQVAQFIKFDEM 386
Score = 126 bits (270), Expect(2) = 3e-037
Identities = 49/81 (60%), Positives = 64/81 (79%)
Frame = -1 / +2
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 365 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 544
Query: 312 MQDVIVSWPGSPNHSSM*THV 250
MQD+++ WP PNHSSM HV
Sbjct: 545 MQDMVMCWPCCPNHSSMSAHV 607
Score = 115 bits (246), Expect(2) = 6e-031
Identities = 55/82 (67%), Positives = 59/82 (71%)
Frame = -2 / +3
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 360 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 539
Query: 317 SSCRM***VGLVVPIIPACEHM 252
SSCR+ * VGLVVPIIPA HM
Sbjct: 540 SSCRIW*CVGLVVPIIPA*AHM 605
Score = 91.8 bits (194), Expect(2) = 3e-022
Identities = 43/80 (53%), Positives = 50/80 (62%)
Frame = +3 / -3
Query: 252 HVFTCWNDWDYQANSLSHPA*RDRLQS**PXXXXXXXXXRVPKEHNSHISCCSHLLRPPC 431
HV +CWNDWD +AN+L +PA* D L *P VPKEHNS+ISC S+LL C
Sbjct: 605 HVRSCWNDWDNKANTLPYPA**DTLCRG*PAGSCAFALLCVPKEHNSNISCFSNLLCTSC 426
Query: 432 SRPGWAVHKVRRDVGDFI*P 491
S G AVHKV DV D + P
Sbjct: 425 SCSGGAVHKV**DVRDVVEP 366
Score = 51.9 bits (107), Expect(2) = 5e-050
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 334 PVQELPRLHEKVRSSMFFC*A 272
Score = 48.7 bits (100), Expect(2) = 3e-037
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / +3
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 255 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 362
Score = 38.6 bits (78), Expect(2) = 6e-031
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +2
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 275 SAEEHAAADFLMETRQLLHRAAGSRGV 355
Score = 33.1 bits (66), Expect(2) = 3e-022
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2 / -2
Query: 473 RRLHLAMGGIPRRAASLSRSCPVCMRK*GAPCSSAEQ 583
RR + P A+ RSC V MRK A CSSAE+
Sbjct: 381 RRRRARVVATPLLPAARCRSCLVSMRKSAAACSSAER 271
>gb|CA022160.1|CA022160 HZ42F08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42F08
5-PRIME, mRNA sequence
Length = 520
Score = 168 bits (361), Expect = 4e-041
Identities = 61/68 (89%), Positives = 65/68 (95%)
Frame = +1 / +1
Query: 118 NPKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTH 297
NPKFTLI+AQKNHHTKFF+PG PDNVP GTVVDN VCHPRN+DFYMC+HAGMIGTTRPTH
Sbjct: 316 NPKFTLIVAQKNHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTH 495
Query: 298 YHILHDEI 321
YHILHDEI
Sbjct: 496 YHILHDEI 519
Score = 113 bits (241), Expect = 2e-024
Identities = 54/68 (79%), Positives = 56/68 (82%)
Frame = -2 / -3
Query: 320 ISSCRM***VGLVVPIIPACEHM*KSKFLG*QTLLSTTVPAGTLSGFPGMKNLVW*FFWA 141
ISSCR+ * VGLVVPIIPA HM*KS FLG QT LSTTVP GTLSG PGMKN VW*FF A
Sbjct: 518 ISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMKNFVW*FF*A 339
Query: 140 MINVNLGF 117
I+VNLGF
Sbjct: 338 TISVNLGF 315
Score = 105 bits (223), Expect = 5e-022
Identities = 39/68 (57%), Positives = 53/68 (77%)
Frame = -1 / -2
Query: 321 YLVMQDVIVSWPGSPNHSSM*THVEIEVPWMTDFVVNNSAGWNIIWLSRNEKFSVVILLG 142
YL+MQD+++ WP PNHSSM HV++ +PWM D ++NNSA +I+ SR+EK VVILL
Sbjct: 519 YLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADSIINNSARRDIVRRSRHEKLCVVILLS 340
Query: 141 NDQCELGI 118
N+QCELG+
Sbjct: 339 NNQCELGV 316
>gb|AV937068.1|AV937068 AV937068 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal9a21 3', mRNA sequence
Length = 587
Score = 134 bits (287), Expect(2) = 2e-040
Identities = 55/61 (90%), Positives = 57/61 (93%)
Frame = +1 / -1
Query: 289 PTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDE 468
PTHYHILHDEI F DDLQ+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDE
Sbjct: 587 PTHYHILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDE 408
Query: 469 M 471
M
Sbjct: 407 M 405
Score = 105 bits (225), Expect(2) = 5e-031
Identities = 40/68 (58%), Positives = 55/68 (80%)
Frame = -1 / +3
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 384 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 563
Query: 312 MQDVIVSW 289
MQD+++ W
Sbjct: 564 MQDMVMCW 587
Score = 93.2 bits (197), Expect(2) = 3e-024
Identities = 42/65 (64%), Positives = 46/65 (70%)
Frame = -2 / +1
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 379 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 558
Query: 317 SSCRM 303
SSCR+
Sbjct: 559 SSCRI 573
Score = 51.9 bits (107), Expect(2) = 2e-040
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -1
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 353 PVQELPRLHEKVRSSMFFC*A 291
Score = 48.7 bits (100), Expect(2) = 5e-031
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / +1
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 274 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 381
Score = 38.6 bits (78), Expect(2) = 3e-024
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +3
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 294 SAEEHAAADFLMETRQLLHRAAGSRGV 374
>gb|CB876232.1|CB876232 HX10K21w HX Hordeum vulgare subsp. vulgare cDNA clone HX10K21
3-PRIME, mRNA sequence
Length = 584
Score = 128 bits (275), Expect(2) = 8e-039
Identities = 53/59 (89%), Positives = 55/59 (93%)
Frame = +1 / -3
Query: 295 HYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
HYHILHDEI F DDLQ+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 582 HYHILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 406
Score = 101 bits (215), Expect(2) = 1e-029
Identities = 39/66 (59%), Positives = 54/66 (81%)
Frame = -1 / +1
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 385 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 564
Query: 312 MQDVIV 295
MQD+++
Sbjct: 565 MQDMVM 582
Score = 93.2 bits (197), Expect(2) = 3e-024
Identities = 42/65 (64%), Positives = 46/65 (70%)
Frame = -2 / +2
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 380 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 559
Query: 317 SSCRM 303
SSCR+
Sbjct: 560 SSCRI 574
Score = 51.9 bits (107), Expect(2) = 8e-039
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -3
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 354 PVQELPRLHEKVRSSMFFC*A 292
Score = 48.7 bits (100), Expect(2) = 1e-029
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / +2
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 275 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 382
Score = 38.6 bits (78), Expect(2) = 3e-024
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +1
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 295 SAEEHAAADFLMETRQLLHRAAGSRGV 375
>gb|BU976900.1|BU976900 HA10I02u HA Hordeum vulgare subsp. vulgare cDNA clone HA10I02
3-PRIME, mRNA sequence
Length = 514
Score = 118 bits (252), Expect(2) = 1e-035
Identities = 50/56 (89%), Positives = 52/56 (92%)
Frame = +1 / -3
Query: 304 ILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
ILHDEI F DDLQ+LVHSLSYVYQRSTTAISVV+PICYAHLAAAQV QFIKFDEM
Sbjct: 512 ILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEM 345
Score = 99.1 bits (210), Expect(2) = 5e-029
Identities = 39/63 (61%), Positives = 51/63 (80%)
Frame = -1 / +3
Query: 492 MAR*SLRHLVELYELPNLGGCKVGVADGSNN*YGCCAPLVHVRERVHQLLQVIRIEAYLV 313
+AR L HL++LYEL +L CK+ +AD NN*Y CCAPLVH+RER+H++LQVIR + YL+
Sbjct: 324 LARRRLGHLIKLYELRHLSSCKMCIADWRNN*YCCCAPLVHIRERMHKILQVIRGKVYLI 503
Query: 312 MQD 304
MQD
Sbjct: 504 MQD 512
Score = 93.2 bits (197), Expect(2) = 3e-024
Identities = 42/65 (64%), Positives = 46/65 (70%)
Frame = -2 / +1
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLD+VSDISSNFMNC T AAAR A*Q+G TTD+AVVLLWY S K I
Sbjct: 319 PPWLDDVSDISSNFMNCAT*AAARCA*QIGETTDIAVVLLWYT*ESECTRSCRSSAAKCI 498
Query: 317 SSCRM 303
SSCR+
Sbjct: 499 SSCRI 513
Score = 51.9 bits (107), Expect(2) = 1e-035
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1 / -3
Query: 520 PVQELPRLHEKVRSSMFFC*A 582
PVQELPRLHEKVRSSMFFC*A
Sbjct: 293 PVQELPRLHEKVRSSMFFC*A 231
Score = 48.7 bits (100), Expect(2) = 5e-029
Identities = 23/36 (63%), Positives = 25/36 (69%)
Frame = -2 / +1
Query: 599 RDTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
R + +AQQKNM L TFS RRGSS TG L EV PP
Sbjct: 214 RASATSAQQKNMLLRTFSWRRGSSCTGPLAVEVWPP 321
Score = 38.6 bits (78), Expect(2) = 3e-024
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -1 / +3
Query: 579 SAEEHGAPHFLMQTGQLLDRDAARRGM 499
SAEEH A FLM+T QLL R A RG+
Sbjct: 234 SAEEHAAADFLMETRQLLHRAAGSRGV 314
>gb|BM100617.2|BM100617 EBma01_SQ005_L23_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ005_L23 5', mRNA sequence
Length = 670
Score = 134 bits (288), Expect(2) = 2e-034
Identities = 51/85 (60%), Positives = 62/85 (72%)
Frame = +1 / +3
Query: 181 KPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHS 360
K N+ GTVVD +CHP FDFY+CSHAG+ GT+RPTHYH+L DE GF D LQ+L ++
Sbjct: 411 KSGNILPGTVVDTNICHPTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQLTNN 590
Query: 361 LSYVYQRSTTAISVVAPICYAHLAA 435
L Y Y R T ++SVV P YAHLAA
Sbjct: 591 LCYTYARCTRSVSVVPPAYYAHLAA 665
Score = 31.3 bits (62), Expect(2) = 2e-034
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1 / +3
Query: 112 EMNPKFTLIIAQKNHHTKFF 171
+ PK T ++ QK HHT+ F
Sbjct: 324 DYQPKVTFVVVQKRHHTRLF 383
>gb|BJ451080.1|BJ451080 BJ451080 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak32j21 5', mRNA sequence
Length = 576
Score = 137 bits (293), Expect(2) = 3e-034
Identities = 52/105 (49%), Positives = 71/105 (67%)
Frame = +1 / +1
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
NH+ + + K N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 157 NHNDQRSVDRKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 336
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFD 465
D LQ L ++L Y Y R T ++S+V P YAHLAA + +++ D
Sbjct: 337 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMELD 471
Score = 28.1 bits (55), Expect(2) = 3e-034
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +1
Query: 121 PKFTLIIAQKNHHTKFF 171
P T ++ QK HHT+ F
Sbjct: 100 PPVTFVVVQKRHHTRLF 150
>gb|CA030113.1|CA030113 HX06C02r HX Hordeum vulgare subsp. vulgare cDNA clone HX06C02
5-PRIME, mRNA sequence
Length = 624
Score = 131 bits (281), Expect(2) = 1e-032
Identities = 51/105 (48%), Positives = 70/105 (66%)
Frame = +1 / +3
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N+H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 162 NNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 341
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFD 465
D+LQ L ++L Y Y R T ++S+V P YAHLAA + +++ D
Sbjct: 342 ADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 476
Score = 28.1 bits (55), Expect(2) = 1e-032
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +3
Query: 121 PKFTLIIAQKNHHTKFF 171
P T ++ QK HHT+ F
Sbjct: 108 PPVTFVVVQKRHHTRLF 158
>gb|BG415995.2|BG415995 HVSMEk0009F13f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0009F13f, mRNA sequence
Length = 970
Score = 131 bits (281), Expect(2) = 7e-032
Identities = 51/105 (48%), Positives = 70/105 (66%)
Frame = +1 / +1
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N+H + N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F
Sbjct: 49 NNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFT 228
Query: 331 PDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFD 465
D+LQ L ++L Y Y R T ++S+V P YAHLAA + +++ D
Sbjct: 229 ADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 363
Score = 25.8 bits (50), Expect(2) = 7e-032
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1 / +1
Query: 130 TLIIAQKNHHTKFF 171
T ++ QK HHT+ F
Sbjct: 4 TFVVVQKRHHTRLF 45
>gb|AV916245.1|AV916245 AV916245 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12e13 5', mRNA sequence
Length = 481
Score = 131 bits (281), Expect(2) = 2e-031
Identities = 49/85 (57%), Positives = 63/85 (74%)
Frame = +1 / +1
Query: 181 KPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHS 360
K N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F+ D++Q L ++
Sbjct: 193 KSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEMQTLTNN 372
Query: 361 LSYVYQRSTTAISVVAPICYAHLAA 435
L Y Y R T ++SVV P YAHLAA
Sbjct: 373 LCYTYARCTRSVSVVPPAYYAHLAA 447
Score = 24.4 bits (47), Expect(2) = 2e-031
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1 / +2
Query: 121 PKFTLIIAQKNHHT 162
P T ++ QK HHT
Sbjct: 107 PPVTFVVVQKRHHT 148
>gb|BQ664937.1|BQ664937 HX01H11w HX Hordeum vulgare subsp. vulgare cDNA clone HX01H11
3-PRIME, mRNA sequence
Length = 669
Score = 108 bits (230), Expect(2) = 3e-031
Identities = 44/54 (81%), Positives = 49/54 (90%)
Frame = +1 / -2
Query: 310 HDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
HDEIGF+ D+LQE VHSLSYVYQRSTTAISV API YAHLAAAQVG F+KF++M
Sbjct: 668 HDEIGFSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDM 507
Score = 88.1 bits (186), Expect(2) = 9e-028
Identities = 39/63 (61%), Positives = 43/63 (68%)
Frame = -2 / +1
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWYXXXXXXXXXXXXSGLKPI 318
PPWLDEVSD+SSNFM PT AAAR A +GA T++AVVLLWY S LKPI
Sbjct: 481 PPWLDEVSDMSSNFMKVPTCAAARCAYAIGAATEIAVVLLWYT*ESEWTNSWSSSALKPI 660
Query: 317 SSC 309
SSC
Sbjct: 661 SSC 669
Score = 55.6 bits (115), Expect(2) = 9e-028
Identities = 24/35 (68%), Positives = 25/35 (71%)
Frame = -2 / +1
Query: 596 DTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
D A QQKNMELLTFSC RGSS T LP +V PP
Sbjct: 379 DNSRAHQQKNMELLTFSCSRGSSGTEALPTDVWPP 483
Score = 46.9 bits (96), Expect(2) = 3e-031
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = +2 / -3
Query: 494 GGIPRRAASLSRSCPVCMRK*GAPCSSAEQQGMC 595
G R AA RSC CMRK*GAPCSSA+ G C
Sbjct: 481 GATRRWAAPRCRSCLGCMRK*GAPCSSADGLGCC 380
>gb|BJ473415.1|BJ473415 BJ473415 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12f16 3', mRNA sequence
Length = 588
Score = 129 bits (277), Expect = 2e-029
Identities = 49/92 (53%), Positives = 66/92 (71%)
Frame = +1 / -3
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D+LQ L ++L Y
Sbjct: 559 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCY 380
Query: 370 VYQRSTTAISVVAPICYAHLAAAQVGQFIKFD 465
Y R T ++S+V P YAHLAA + +++ D
Sbjct: 379 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 284
>gb|CB874722.1|CB874722 HX06C02w HX Hordeum vulgare subsp. vulgare cDNA clone HX06C02
3-PRIME, mRNA sequence
Length = 645
Score = 129 bits (277), Expect = 2e-029
Identities = 49/92 (53%), Positives = 66/92 (71%)
Frame = +1 / -2
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
N+ GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D+LQ L ++L Y
Sbjct: 608 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCY 429
Query: 370 VYQRSTTAISVVAPICYAHLAAAQVGQFIKFD 465
Y R T ++S+V P YAHLAA + +++ D
Sbjct: 428 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 333
>gb|BU996805.1|BU996805 HM14N04r HM Hordeum vulgare subsp. vulgare cDNA clone HM14N04
5-PRIME, mRNA sequence
Length = 612
Score = 118 bits (252), Expect(2) = 5e-029
Identities = 43/82 (52%), Positives = 56/82 (68%)
Frame = +1 / +2
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSY 369
NV GTVVD ++CHP FDF++CSHAG+ GT+RP HYH+L D+ F+ DDLQ L ++L Y
Sbjct: 278 NVMPGTVVDRQICHPTEFDFFLCSHAGIKGTSRPAHYHVLRDDNNFSADDLQSLTNNLCY 457
Query: 370 VYQRSTTAISVVAPICYAHLAA 435
Y T ++S P YAH A
Sbjct: 458 TYASCTRSVSTAPPAYYAHKLA 523
Score = 29.5 bits (58), Expect(2) = 5e-029
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1 / +2
Query: 115 MNPKFTLIIAQKNHHTKFF 171
+ P T I+ QK HHT+ F
Sbjct: 188 VKPPITFIVVQKRHHTRLF 244
>gb|CB874756.1|CB874756 HX06D16w HX Hordeum vulgare subsp. vulgare cDNA clone HX06D16
3-PRIME, mRNA sequence
Length = 635
Score = 127 bits (272), Expect = 8e-029
Identities = 48/88 (54%), Positives = 64/88 (72%)
Frame = +1 / -3
Query: 202 GTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQR 381
GTVVD+K+CHP FDFY+CSHAG+ GT+RP HYH+L DE F D+LQ L ++L Y Y R
Sbjct: 591 GTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYAR 412
Query: 382 STTAISVVAPICYAHLAAAQVGQFIKFD 465
T ++S+V P YAHLAA + +++ D
Sbjct: 411 CTRSVSIVPPAYYAHLAAFRARFYMEPD 328
>gb|AV921670.1|AV921670 AV921670 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12e13 3', mRNA sequence
Length = 589
Score = 76.2 bits (160), Expect(3) = 5e-028
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +1 / -2
Query: 277 GTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
GT+RP HYH+L DE F+ D++Q L ++L Y Y R T ++SVV P YAHLAA
Sbjct: 501 GTSRPAHYHVLWDENNFSADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAA 343
Score = 59.7 bits (124), Expect(3) = 5e-028
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +1 / -1
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSHAGMIG 279
N+ GTVVD+K+CHP FDFY+CSHAG+ G
Sbjct: 589 NILPGTVVDSKICHPTEFDFYLCSHAGIPG 500
Score = 26.3 bits (51), Expect(3) = 5e-028
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1 / -2
Query: 523 VQELPRLHEKVRSSMFFC* 579
V+ LP + EKV+ MF+C*
Sbjct: 261 VKPLPAVKEKVKRVMFYC* 205
>gb|BU971142.1|BU971142 HB16L19r BC Hordeum vulgare subsp. vulgare cDNA clone HB16L19
5-PRIME, mRNA sequence
Length = 470
Score = 112 bits (239), Expect(2) = 9e-028
Identities = 41/69 (59%), Positives = 50/69 (72%)
Frame = +1 / +1
Query: 181 KPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHS 360
K N+ GTVVD +CHP FDFY+CSHAG+ GT+RPTHYH+L DE GF D LQ+L ++
Sbjct: 262 KSGNILPGTVVDTNICHPTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQLTNN 441
Query: 361 LSYVYQRST 387
L Y Y R T
Sbjct: 442 LCYTYARCT 468
Score = 31.3 bits (62), Expect(2) = 9e-028
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1 / +1
Query: 112 EMNPKFTLIIAQKNHHTKFF 171
+ PK T ++ QK HHT+ F
Sbjct: 175 DYQPKVTFVVVQKRHHTRLF 234
>gb|BQ659639.1|BQ659639 HF01C16w HF Hordeum vulgare subsp. vulgare cDNA clone HF01C16
3-PRIME, mRNA sequence
Length = 623
Score = 95.0 bits (201), Expect(2) = 3e-027
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = +1 / -2
Query: 325 FNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
F+ D+LQE VHSLSYVYQRSTTAISV API YAHLAAAQVG F+KF++M
Sbjct: 622 FSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDM 476
Score = 76.2 bits (160), Expect(2) = 3e-024
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = -2 / +3
Query: 497 PPWLDEVSDISSNFMNCPTWAAARWA*QMGATTDMAVVLLWY 372
PPWLDEVSD+SSNFM PT AAAR A +GA T++AVVLLWY
Sbjct: 450 PPWLDEVSDMSSNFMKVPTCAAARCAYAIGAATEIAVVLLWY 575
Score = 55.6 bits (115), Expect(2) = 3e-024
Identities = 24/35 (68%), Positives = 25/35 (71%)
Frame = -2 / +3
Query: 596 DTFPAAQQKNMELLTFSCRRGSSWTGTLPAEVCPP 492
D A QQKNMELLTFSC RGSS T LP +V PP
Sbjct: 348 DNSRAHQQKNMELLTFSCSRGSSGTEALPTDVWPP 452
Score = 46.9 bits (96), Expect(2) = 3e-027
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = +2 / -3
Query: 494 GGIPRRAASLSRSCPVCMRK*GAPCSSAEQQGMC 595
G R AA RSC CMRK*GAPCSSA+ G C
Sbjct: 450 GATRRWAAPRCRSCLGCMRK*GAPCSSADGLGCC 349
>gb|BU986936.1|BU986936 HF13F11r HF Hordeum vulgare subsp. vulgare cDNA clone HF13F11
5-PRIME, mRNA sequence
Length = 664
Score = 116 bits (247), Expect = 2e-025
Identities = 41/54 (75%), Positives = 48/54 (88%)
Frame = +1 / +1
Query: 121 PKFTLIIAQKNHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGT 282
PKFT+I+AQKNHHT+FF P+NVP GTVVD +VCHP+NFDFYMC+HAGMIGT
Sbjct: 502 PKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGT 663
>gb|BG415324.2|BG415324 HVSMEk0006A22f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0006A22f, mRNA sequence
Length = 639
Score = 115 bits (245), Expect = 4e-025
Identities = 45/85 (52%), Positives = 60/85 (70%)
Frame = +1 / +2
Query: 181 KPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHS 360
K NV GTVVD ++ P +DFY+CSH G+IGT+RPTHY+ L DE G+ DDLQ LV++
Sbjct: 2 KNGNVLPGTVVDTRIVDPVTYDFYLCSHNGLIGTSRPTHYYNLMDEHGYGSDDLQRLVYN 181
Query: 361 LSYVYQRSTTAISVVAPICYAHLAA 435
L +V+ R T +S+ P+ YA LAA
Sbjct: 182 LCFVFARCTKPVSLATPVYYADLAA 256
>gb|BU973725.1|BU973725 HB25M17r BC Hordeum vulgare subsp. vulgare cDNA clone HB25M17
5-PRIME, mRNA sequence
Length = 506
Score = 110 bits (235), Expect(2) = 9e-025
Identities = 42/68 (61%), Positives = 51/68 (75%)
Frame = +1 / +1
Query: 232 PRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVVAP 411
P FDFY+CSHAG+ GT+RPTHYH+L DE GF D LQ+L ++L Y Y R T ++SVV P
Sbjct: 13 PTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQLTNNLCYTYARCTRSVSVVPP 192
Query: 412 ICYAHLAA 435
YAHLAA
Sbjct: 193 AYYAHLAA 216
Score = 24.9 bits (48), Expect(2) = 9e-025
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1 / +1
Query: 532 LPRLHEKVRSSMFFC* 579
LPR+ + V+ MF+C*
Sbjct: 343 LPRIRDNVKEVMFYC* 390
>gb|BJ468650.1|BJ468650 BJ468650 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39l05 3', mRNA sequence
Length = 673
Score = 111 bits (238), Expect = 4e-024
Identities = 42/80 (52%), Positives = 56/80 (70%)
Frame = +1 / -3
Query: 226 CHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRSTTAISVV 405
CHP FDFY+CSHAG+ GT+RP HYH+L DE F D+LQ L ++L Y Y R T ++S+V
Sbjct: 671 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIV 492
Query: 406 APICYAHLAAAQVGQFIKFD 465
P YAHLAA + +++ D
Sbjct: 491 PPAYYAHLAAFRARFYMEPD 432
>gb|BE215344.1|BE215344 HV_CEb0006I15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006I15f, mRNA sequence
Length = 679
Score = 101 bits (215), Expect(2) = 1e-023
Identities = 38/82 (46%), Positives = 53/82 (64%)
Frame = +1 / +2
Query: 151 NHHTKFFIPGKPDNVPAGTVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFN 330
N+H + N+ GTVVD+K+CHP FDFY+C+HAG+ GT+RP +YH+L DE F
Sbjct: 338 NNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCNHAGIQGTSRPANYHVLWDENKFT 517
Query: 331 PDDLQELVHSLSYVYQRSTTAI 396
D+LQ L L Y Y + T ++
Sbjct: 518 ADELQTLKKKLCYNYAKGTRSV 583
Score = 28.1 bits (55), Expect(2) = 1e-023
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1 / +2
Query: 121 PKFTLIIAQKNHHTKFF 171
P T ++ QK HHT+ F
Sbjct: 284 PPVTFVVVQKRHHTRLF 334
>gb|CB859263.1|CB859263 HI09O13w HI Hordeum vulgare subsp. vulgare cDNA clone HI09O13
3-PRIME, mRNA sequence
Length = 544
Score = 108 bits (231), Expect = 4e-023
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +1 / -2
Query: 205 TVVDNKVCHPRNFDFYMCSHAGMIGTTRPTHYHILHDEIGFNPDDLQELVHSLSYVYQRS 384
TVVD ++ P +DFY+CSH G+IGT+RPTHY+ L DE G+ DDLQ LV++L +V+ R
Sbjct: 543 TVVDTRIVDPVTYDFYLCSHNGLIGTSRPTHYYNLMDEHGYGSDDLQRLVYNLCFVFARC 364
Query: 385 TTAISVVAPICYAHLAA 435
T +S+ P+ YA LAA
Sbjct: 363 TKPVSLATPVYYADLAA 313
>gb|CD663310.1|CD663310 UCRHV18_05ad02_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_05ad02, mRNA sequence
Length = 537
Score = 77.6 bits (163), Expect(2) = 6e-021
Identities = 33/42 (78%), Positives = 35/42 (83%)
Frame = +1 / -3
Query: 346 ELVHSLSYVYQRSTTAISVVAPICYAHLAAAQVGQFIKFDEM 471
+ VHSL YV+QRS TAISVV PI YAH A AQVGQFIKFDEM
Sbjct: 526 DFVHSLFYVFQRSPTAISVVFPIWYAHFATAQVGQFIKFDEM 401
Score = 43.2 bits (88), Expect(2) = 6e-021
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1 / -3
Query: 520 PVQELPRLHEKVRSSMFFC* 579
PVQE+P HEKVRSSMFFC*
Sbjct: 349 PVQEVPCFHEKVRSSMFFC* 290
>emb|AJ234606.1|HVU234606 Hordeum vulgare genomic DNA fragment; clone MWG0876.uni
Length = 486
Score = 51.9 bits (107), Expect(4) = 6e-021
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +1 / -2
Query: 313 DEIGFNPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAA 435
DE F D++Q+L+H+L Y + R T +S+V P YAHLAA
Sbjct: 311 DENKFQSDEVQQLIHNLCYTFVRCTRPVSLVPPAYYAHLAA 189
Score = 48.3 bits (99), Expect(4) = 6e-021
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1 / -1
Query: 190 NVPAGTVVDNKVCHPRNFDFYMCSH 264
N+P GTVVD + H R FDFY+CSH
Sbjct: 432 NIPPGTVVDTVITHXREFDFYLCSH 358
Score = 31.8 bits (63), Expect(4) = 6e-021
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1 / -3
Query: 268 GMIGTTRPTHYHILHDEIGFNP 333
G GT+RPTHYHIL +P
Sbjct: 355 GTKGTSRPTHYHILLTRTSSSP 290
Score = 23.1 bits (44), Expect(4) = 6e-021
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1 / -2
Query: 532 LPRLHEKVRSSMFFC* 579
LP+L + V+ MF+C*
Sbjct: 98 LPKLTDSVKRLMFYC* 51
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 455,415,753
Number of Sequences: 312970
Number of extensions: 8444036
Number of successful extensions: 69998
Number of sequences better than 1.0e-020: 58
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 9936482404
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)