TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2169937.2.1
(891 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|M96939.1|BLYGLCNHV Hordeum vulgare glucan endo-1,3-beta-... 235 3e-066
gb|BQ766726.1|BQ766726 EBro08_SQ006_O23_R root, 3 week, dro... 235 3e-066
gb|BQ768478.1|BQ768478 EBro08_SQ011_G22_R root, 3 week, dro... 235 4e-066
gb|M96938.1|BLYGLCNHI Hordeum vulgare glucan endo-1,3-beta-... 204 2e-062
gb|AF479647.2| Hordeum vulgare subsp. vulgare beta-1,3-gluc... 214 2e-061
emb|AJ271367.1|HVU271367 Hordeum vulgare mRNA for beta-1,3-... 214 2e-061
gb|AF515785.1| Hordeum vulgare subsp. vulgare beta-1,3-gluc... 214 2e-061
gb|BE601595.2|BE601595 HVSMEh0098M24f Hordeum vulgare 5-45 ... 214 2e-061
gb|BU981210.1|BU981210 HA22P03r HA Hordeum vulgare subsp. v... 217 3e-061
gb|CB879505.1|CB879505 HP02I04w HP Hordeum vulgare subsp. v... 210 4e-061
gb|CB877331.1|CB877331 HP04H07T HP Hordeum vulgare subsp. v... 210 1e-058
gb|BF263831.2|BF263831 HV_CEa0007M17f Hordeum vulgare seedl... 210 5e-057
gb|BJ461506.1|BJ461506 BJ461506 K. Sato unpublished cDNA li... 208 9e-057
gb|AV911030.1|AV911030 AV911030 K. Sato unpublished cDNA li... 208 9e-057
gb|BJ458099.1|BJ458099 BJ458099 K. Sato unpublished cDNA li... 208 9e-057
gb|BJ460297.1|BJ460297 BJ460297 K. Sato unpublished cDNA li... 208 9e-057
gb|BJ452749.1|BJ452749 BJ452749 K. Sato unpublished cDNA li... 208 9e-057
gb|BJ452679.1|BJ452679 BJ452679 K. Sato unpublished cDNA li... 207 2e-056
gb|AL510583.1|AL510583 AL510583 Hordeum vulgare Barke devel... 217 6e-056
gb|CB879474.1|CB879474 HP02G13w HP Hordeum vulgare subsp. v... 210 7e-056
gb|BJ456958.1|BJ456958 BJ456958 K. Sato unpublished cDNA li... 204 1e-055
gb|CB876783.1|CB876783 HP02G13T HP Hordeum vulgare subsp. v... 210 4e-054
gb|AV931182.1|AV931182 AV931182 K. Sato unpublished cDNA li... 191 2e-053
gb|BU981251.1|BU981251 HA23B03r HA Hordeum vulgare subsp. v... 189 6e-053
gb|BJ449523.1|BJ449523 BJ449523 K. Sato unpublished cDNA li... 195 9e-053
gb|BU980481.1|BU980481 HA20M14r HA Hordeum vulgare subsp. v... 176 1e-051
gb|BF258041.2|BF258041 HVSMEf0014J07f Hordeum vulgare seedl... 176 4e-051
gb|BQ766640.1|BQ766640 EBro08_SQ006_O15_R root, 3 week, dro... 199 2e-050
gb|CB878498.1|CB878498 HP08L24T HP Hordeum vulgare subsp. v... 194 4e-049
gb|BJ460231.1|BJ460231 BJ460231 K. Sato unpublished cDNA li... 194 6e-049
gb|BF260325.2|BF260325 HVSMEf0021L05f Hordeum vulgare seedl... 193 8e-049
gb|AY239038.1| Hordeum vulgare subsp. vulgare clone CEa0006... 175 3e-048
gb|AL500833.1|AL500833 AL500833 Hordeum vulgare Barke roots... 190 8e-048
gb|AY239039.1| Hordeum vulgare subsp. vulgare clone SMEm002... 173 2e-047
gb|BJ454422.1|BJ454422 BJ454422 K. Sato unpublished cDNA li... 173 2e-047
gb|BJ450923.1|BJ450923 BJ450923 K. Sato unpublished cDNA li... 173 2e-047
gb|AV909148.1|AV909148 AV909148 K. Sato unpublished cDNA li... 175 9e-047
gb|BI957130.1|BI957130 HVSMEn0007K04f Hordeum vulgare rachi... 184 5e-046
gb|BJ462228.1|BJ462228 BJ462228 K. Sato unpublished cDNA li... 173 1e-043
gb|AL509694.1|AL509694 AL509694 Hordeum vulgare Barke devel... 166 8e-042
gb|BJ456617.1|BJ456617 BJ456617 K. Sato unpublished cDNA li... 89 2e-040
emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanas... 127 2e-036
gb|AV926710.1|AV926710 AV926710 K. Sato unpublished cDNA li... 127 2e-036
gb|AV925542.1|AV925542 AV925542 K. Sato unpublished cDNA li... 127 2e-036
gb|CA018533.1|CA018533 HV08O12r HV Hordeum vulgare subsp. v... 127 2e-036
gb|BQ465340.1|BQ465340 HU03F15r HU Hordeum vulgare subsp. v... 127 2e-036
gb|BF256955.3|BF256955 HVSMEf0011H13f Hordeum vulgare seedl... 129 8e-036
gb|BJ453971.1|BJ453971 BJ453971 K. Sato unpublished cDNA li... 138 8e-036
emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D... 127 4e-035
emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucana... 127 4e-035
gb|BJ546633.1|BJ546633 BJ546633 K. Sato unpublished cDNA li... 127 1e-034
gb|CB877858.1|CB877858 HP06G23T HP Hordeum vulgare subsp. v... 127 1e-034
gb|BJ455256.1|BJ455256 BJ455256 K. Sato unpublished cDNA li... 146 1e-034
gb|BJ449157.1|BJ449157 BJ449157 K. Sato unpublished cDNA li... 89 2e-034
gb|BI950595.1|BI950595 HVSMEl0021J13f Hordeum vulgare spike... 126 5e-034
gb|BQ767737.1|BQ767737 EBro08_SQ009_P13_R root, 3 week, dro... 144 7e-034
gb|CK125397.1|CK125397 BES1824107o07 BES1824 Hordeum vulgar... 128 2e-033
gb|AV927218.1|AV927218 AV927218 K. Sato unpublished cDNA li... 127 2e-033
gb|BI950008.1|BI950008 HVSMEl0017K22f Hordeum vulgare spike... 127 2e-033
gb|BF258044.2|BF258044 HVSMEf0014J13f Hordeum vulgare seedl... 123 4e-033
gb|BG415255.2|BG415255 HVSMEk0005L24f Hordeum vulgare testa... 127 6e-033
gb|BF258566.3|BF258566 HVSMEf0016B09f Hordeum vulgare seedl... 125 2e-032
gb|CB884203.1|CB884203 HV10H06u HV Hordeum vulgare subsp. v... 124 2e-032
gb|CB884213.1|CB884213 HV14A09u HV Hordeum vulgare subsp. v... 124 2e-032
gb|CK125687.1|CK125687 BES1824110a22 BES1824 Hordeum vulgar... 121 4e-032
gb|BI950007.1|BI950007 HVSMEl0017K20f Hordeum vulgare spike... 123 4e-032
gb|DW474925.1|DW474925 1-n92 Subtracted libraries from epid... 122 7e-032
gb|AV923570.1|AV923570 AV923570 K. Sato unpublished cDNA li... 122 1e-031
gb|AV928494.1|AV928494 AV928494 K. Sato unpublished cDNA li... 120 5e-031
gb|CB884195.1|CB884195 HV09B24r HV Hordeum vulgare subsp. v... 116 3e-030
gb|BJ545156.1|BJ545156 BJ545156 K. Sato unpublished cDNA li... 123 4e-030
gb|AV927361.1|AV927361 AV927361 K. Sato unpublished cDNA li... 109 7e-028
gb|BJ545434.1|BJ545434 BJ545434 K. Sato unpublished cDNA li... 109 7e-028
gb|BI952205.1|BI952205 HVSMEm0005A04f Hordeum vulgare green... 70 2e-027
gb|CB879078.1|CB879078 HP10O03T HP Hordeum vulgare subsp. v... 110 2e-027
gb|BF253425.2|BF253425 HVSMEf0001G05f Hordeum vulgare seedl... 113 3e-027
gb|CB879399.1|CB879399 HP02B03w HP Hordeum vulgare subsp. v... 107 3e-027
gb|CB884196.1|CB884196 HV09B24u HV Hordeum vulgare subsp. v... 106 4e-027
gb|CB884210.1|CB884210 HV12O06u HV Hordeum vulgare subsp. v... 106 4e-027
gb|CD663219.1|CD663219 UCRHV18_04da12_b1 Drought-stressed D... 105 8e-027
gb|BQ664638.1|BQ664638 HV04D23u HV Hordeum vulgare subsp. v... 104 2e-026
gb|AV929134.1|AV929134 AV929134 K. Sato unpublished cDNA li... 103 4e-026
gb|AV930490.1|AV930490 AV930490 K. Sato unpublished cDNA li... 103 4e-026
gb|BJ543926.1|BJ543926 BJ543926 K. Sato unpublished cDNA li... 103 6e-026
gb|BJ548188.1|BJ548188 BJ548188 K. Sato unpublished cDNA li... 102 1e-025
gb|BJ450676.1|BJ450676 BJ450676 K. Sato unpublished cDNA li... 102 5e-025
gb|BQ468175.1|BQ468175 HP01E06T HP Hordeum vulgare subsp. v... 100 7e-025
gb|BI778131.2|BI778131 EBro07_SQ002_F02_R root, 3 week, red... 101 7e-025
gb|BQ661884.1|BQ661884 HP01K19w HP Hordeum vulgare subsp. v... 98 2e-024
gb|BI954588.1|BI954588 HVSMEm0018L20f Hordeum vulgare green... 88 2e-024
gb|AV928013.1|AV928013 AV928013 K. Sato unpublished cDNA li... 70 4e-024
gb|BJ447497.1|BJ447497 BJ447497 K. Sato unpublished cDNA li... 111 6e-024
gb|BF064576.1|BF064576 HV_CEb0015P01f Hordeum vulgare seedl... 92 8e-024
gb|AV923914.1|AV923914 AV923914 K. Sato unpublished cDNA li... 101 8e-024
gb|AL504555.1|AL504555 AL504555 Hordeum vulgare Barke roots... 64 1e-023
gb|BI949774.1|BI949774 HVSMEl0015O24f Hordeum vulgare spike... 79 4e-023
gb|BI960657.1|BI960657 HVSMEn0025K09f Hordeum vulgare rachi... 59 1e-022
gb|AL450912.1|AL450912 AL450912 Hordeum vulgare Barke etiol... 106 2e-022
gb|AL500117.1|AL500117 AL500117 Hordeum vulgare Barke etiol... 106 2e-022
gb|AV928558.1|AV928558 AV928558 K. Sato unpublished cDNA li... 70 2e-022
gb|AV928246.1|AV928246 AV928246 K. Sato unpublished cDNA li... 70 6e-022
gb|BG310053.1|BG310053 HVSMEc0016D10f Hordeum vulgare seedl... 89 1e-021
gb|BQ664706.1|BQ664706 HV04H18u HV Hordeum vulgare subsp. v... 61 2e-021
gb|BI947339.1|BI947339 HVSMEl0005D01f Hordeum vulgare spike... 92 5e-021
>gb|M96939.1|BLYGLCNHV Hordeum vulgare glucan endo-1,3-beta-glucosidase (isoenzyme V) mRNA,
complete cds
Length = 1230
Score = 235 bits (507), Expect(3) = 3e-066
Identities = 92/119 (77%), Positives = 103/119 (86%)
Frame = +2 / +1
Query: 341 QPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNA 520
QPGTTVRDNGNGL Y +LFDAMVD++ AALEKAG PNVRVVVSE GWPSAGGFGASV+NA
Sbjct: 649 QPGTTVRDNGNGLTYTSLFDAMVDSIYAALEKAGTPNVRVVVSESGWPSAGGFGASVENA 828
Query: 521 RKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
R YNQGLIDH+ GTPKR G +ET++FAMFNEN+K GD E+NFGLF+ NKQPVYP F
Sbjct: 829 RNYNQGLIDHIRSGTPKRPGAIETYIFAMFNENRKPGDEVERNFGLFFPNKQPVYPTTF 1005
Score = 118 bits (253), Expect(4) = 7e-033
Identities = 52/82 (63%), Positives = 55/82 (67%)
Frame = -1 / -2
Query: 690 IGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALS 511
+G TGCLL K PKF S SP F FSLNMA VS P GVP WS+SPWL FRA S
Sbjct: 998 VG*TGCLLGKKSPKFLSTSSPGFLFSLNMANMYVSIAPGRFGVPLRMWSISPWL*FRAFS 819
Query: 510 TLAPKPPAEGQPXSDTTTLTLG 445
T AP PPA+G P SDTTTLT G
Sbjct: 818 TDAPNPPADGHPLSDTTTLTFG 753
Score = 30.9 bits (61), Expect(3) = 3e-066
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1 / +1
Query: 253 AXGXRXSPNVYPYFAYRDN 309
+ G NVYPYFAYRD+
Sbjct: 556 STGAPFLANVYPYFAYRDD 612
Score = 30.4 bits (60), Expect(4) = 7e-033
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3 / -1
Query: 466 HDDPDVGRAGLLERGDD 416
H PDV RAGLL+RG D
Sbjct: 774 HHHPDVRRAGLLQRGVD 724
Score = 25.4 bits (49), Expect(3) = 3e-066
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +3
Query: 310 PRDISWVRHVPAGHH 354
P + +RH PAGHH
Sbjct: 618 PEHPAQLRHAPAGHH 662
Score = 24.4 bits (47), Expect(4) = 7e-033
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3 / -3
Query: 310 GCPGTRSKGTRLAXXG 263
G PG RSKGTR G
Sbjct: 613 GRPGRRSKGTRWPGTG 566
Score = 22.6 bits (43), Expect(4) = 7e-033
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 361 PDGGARLERGV 329
P GARLERGV
Sbjct: 669 PHRGARLERGV 637
>gb|BQ766726.1|BQ766726 EBro08_SQ006_O23_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ006_O23 5', mRNA sequence
Length = 599
Score = 235 bits (507), Expect(3) = 3e-066
Identities = 92/119 (77%), Positives = 103/119 (86%)
Frame = +2 / +3
Query: 341 QPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNA 520
QPGTTVRDNGNGL Y +LFDAMVD++ AALEKAG PNVRVVVSE GWPSAGGFGASV+NA
Sbjct: 147 QPGTTVRDNGNGLTYTSLFDAMVDSIYAALEKAGTPNVRVVVSESGWPSAGGFGASVENA 326
Query: 521 RKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
R YNQGLIDH+ GTPKR G +ET++FAMFNEN+K GD E+NFGLF+ NKQPVYP F
Sbjct: 327 RNYNQGLIDHIRSGTPKRPGAIETYIFAMFNENRKPGDEVERNFGLFFPNKQPVYPTTF 503
Score = 118 bits (253), Expect(4) = 7e-033
Identities = 52/82 (63%), Positives = 55/82 (67%)
Frame = -1 / -2
Query: 690 IGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALS 511
+G TGCLL K PKF S SP F FSLNMA VS P GVP WS+SPWL FRA S
Sbjct: 496 VG*TGCLLGKKSPKFLSTSSPGFLFSLNMANMYVSIAPGRFGVPLRMWSISPWL*FRAFS 317
Query: 510 TLAPKPPAEGQPXSDTTTLTLG 445
T AP PPA+G P SDTTTLT G
Sbjct: 316 TDAPNPPADGHPLSDTTTLTFG 251
Score = 30.9 bits (61), Expect(3) = 3e-066
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1 / +3
Query: 253 AXGXRXSPNVYPYFAYRDN 309
+ G NVYPYFAYRD+
Sbjct: 54 STGAPFLANVYPYFAYRDD 110
Score = 30.4 bits (60), Expect(4) = 7e-033
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3 / -1
Query: 466 HDDPDVGRAGLLERGDD 416
H PDV RAGLL+RG D
Sbjct: 272 HHHPDVRRAGLLQRGVD 222
Score = 25.4 bits (49), Expect(3) = 3e-066
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +2
Query: 310 PRDISWVRHVPAGHH 354
P + +RH PAGHH
Sbjct: 116 PEHPAQLRHAPAGHH 160
Score = 24.4 bits (47), Expect(4) = 7e-033
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3 / -3
Query: 310 GCPGTRSKGTRLAXXG 263
G PG RSKGTR G
Sbjct: 111 GRPGRRSKGTRWPGTG 64
Score = 22.6 bits (43), Expect(4) = 7e-033
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 361 PDGGARLERGV 329
P GARLERGV
Sbjct: 167 PHRGARLERGV 135
>gb|BQ768478.1|BQ768478 EBro08_SQ011_G22_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_G22 5', mRNA sequence
Length = 592
Score = 235 bits (507), Expect(3) = 4e-066
Identities = 92/119 (77%), Positives = 103/119 (86%)
Frame = +2 / +2
Query: 341 QPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNA 520
QPGTTVRDNGNGL Y +LFDAMVD++ AALEKAG PNVRVVVSE GWPSAGGFGASV+NA
Sbjct: 77 QPGTTVRDNGNGLTYTSLFDAMVDSIYAALEKAGTPNVRVVVSESGWPSAGGFGASVENA 256
Query: 521 RKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
R YNQGLIDH+ GTPKR G +ET++FAMFNEN+K GD E+NFGLF+ NKQPVYP F
Sbjct: 257 RNYNQGLIDHIRSGTPKRPGAIETYIFAMFNENRKPGDEVERNFGLFFPNKQPVYPTTF 433
Score = 118 bits (253), Expect(5) = 1e-035
Identities = 52/82 (63%), Positives = 55/82 (67%)
Frame = -1 / -2
Query: 690 IGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALS 511
+G TGCLL K PKF S SP F FSLNMA VS P GVP WS+SPWL FRA S
Sbjct: 426 VG*TGCLLGKKSPKFLSTSSPGFLFSLNMANMYVSIAPGRFGVPLRMWSISPWL*FRAFS 247
Query: 510 TLAPKPPAEGQPXSDTTTLTLG 445
T AP PPA+G P SDTTTLT G
Sbjct: 246 TDAPNPPADGHPLSDTTTLTFG 181
Score = 30.4 bits (60), Expect(5) = 1e-035
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3 / -1
Query: 466 HDDPDVGRAGLLERGDD 416
H PDV RAGLL+RG D
Sbjct: 202 HHHPDVRRAGLLQRGVD 152
Score = 30.4 bits (60), Expect(3) = 4e-066
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 277 NVYPYFAYRDN 309
NVYPYFAYRD+
Sbjct: 8 NVYPYFAYRDD 40
Score = 27.2 bits (53), Expect(5) = 1e-035
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3 / -1
Query: 889 FLHQNSISFYSSYIDRVRAYKLIAPLLHK 803
F Q+ FY+SY++R +K+I+ +HK
Sbjct: 568 FRWQSMHPFYASYVNRR*LFKIIS*SIHK 482
Score = 25.4 bits (49), Expect(3) = 4e-066
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1 / +1
Query: 310 PRDISWVRHVPAGHH 354
P + +RH PAGHH
Sbjct: 46 PEHPAQLRHAPAGHH 90
Score = 23.5 bits (45), Expect(5) = 1e-035
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 310 GCPGTRSKGTR 278
G PG RSKGTR
Sbjct: 41 GRPGRRSKGTR 9
Score = 22.6 bits (43), Expect(5) = 1e-035
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 361 PDGGARLERGV 329
P GARLERGV
Sbjct: 97 PHRGARLERGV 65
>gb|M96938.1|BLYGLCNHI Hordeum vulgare glucan endo-1,3-beta-glucosidase (isoenzyme I)
mRNA, 3' end
Length = 1025
Score = 204 bits (440), Expect(3) = 2e-062
Identities = 87/120 (72%), Positives = 95/120 (79%)
Frame = +2 / +1
Query: 350 TTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKY 529
TTVRD GL LFDAMVDAVVAALE++GAP VRVVVSE GWPSA GF A+ DNAR Y
Sbjct: 568 TTVRDPNTGLTSQCLFDAMVDAVVAALERSGAPGVRVVVSESGWPSASGFAATADNARAY 747
Query: 530 NQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN*LR 709
NQGLIDHVG GTPKR G LET++FAMFNEN K G+ TEK+FGLF +K P YPIRF * R
Sbjct: 748 NQGLIDHVGGGTPKRPGALETYIFAMFNENFKTGELTEKHFGLFNPDKSPAYPIRFQ*RR 927
Score = 119 bits (254), Expect(3) = 8e-031
Identities = 58/116 (50%), Positives = 63/116 (54%)
Frame = -1 / -1
Query: 696 NRIGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRA 517
NR+GY G L PK FSV SP FSLNMAK VS+ P LLGVP PTWS+SPWLY A
Sbjct: 914 NRMGYAGDLSGLNSPKCFSVSSPVLKFSLNMAKMYVSNAPGLLGVPPPTWSISPWLYALA 735
Query: 516 LSTLAPKPPAEGQPXSDTTTLTLGXXXXXXXXXXXXXXXSNXXXXXXXXXXXLTVV 349
LS +A P A+G P SDTTTLT G SN TVV
Sbjct: 734 LSAVAANPLADGHPLSDTTTLTPGAPDRSSAATTASTMASNRHCEVSPVLGSRTVV 567
Score = 51.9 bits (107), Expect(3) = 2e-062
Identities = 22/51 (43%), Positives = 25/51 (49%)
Frame = +1 / +1
Query: 169 FDVVANFVPAXKGSFGKGTCGTSRATWRAXGXRXSPNVYPYFAYRDNPRDI 321
FD V N P G F + + G NVYPYFAY+DNPRDI
Sbjct: 382 FDAVTNTFPPSNGVFAQAYMTDVARLLASTGAPLLTNVYPYFAYKDNPRDI 534
Score = 28.6 bits (56), Expect(3) = 8e-031
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3 / -2
Query: 319 CRAGCPGTRSKGTR 278
C AGCP RS+GTR
Sbjct: 532 CPAGCPCRRSRGTR 491
Score = 24.0 bits (46), Expect(3) = 8e-031
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3 / -1
Query: 286 GTRLAXXGXPVPAK*RATSRMYPSRRTP 203
G L G PV A RATS M TP
Sbjct: 500 GYTLVSSGAPVLASSRATSVM*ACANTP 417
Score = 22.1 bits (42), Expect(3) = 2e-062
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +3
Query: 328 VRHVPAGHH 354
+R VPAGHH
Sbjct: 543 LRDVPAGHH 569
>gb|AF479647.2| Hordeum vulgare subsp. vulgare beta-1,3-glucanase gene, complete cds
Length = 2135
Score = 214 bits (461), Expect(3) = 2e-061
Identities = 88/120 (73%), Positives = 98/120 (81%)
Frame = +2 / +1
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDN 517
FQPGTTVRD NGL Y +LFDAMVDAV AALEKAGAP V+VVVSE GWPSAGGF AS N
Sbjct: 1627 FQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAGGFAASAGN 1806
Query: 518 ARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
AR YNQGLI+HVG GTPK+ LET++FAMFNENQK GD TE++FGLF +K P Y I+F
Sbjct: 1807 ARTYNQGLINHVGGGTPKKREALETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNIQF 1986
Score = 128 bits (275), Expect(3) = 2e-033
Identities = 59/116 (50%), Positives = 61/116 (52%)
Frame = -1 / -1
Query: 684 YTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTL 505
Y G L K PK SV SP FWFSLNMAK VSS LGVP PTW +SPWLY RAL
Sbjct: 1973 YAGDLSGLKSPKLLSVASPVFWFSLNMAKMYVSSASRFLGVPPPTWLISPWLYVRALPAD 1794
Query: 504 APKPPAEGQPXSDTTTLTLGXXXXXXXXXXXXXXXSNXXXXXXXXXXXLTVVPGWN 337
A PPA+G P SDTTT T G SN TVVPGWN
Sbjct: 1793 AANPPADGHPLSDTTTFTAGAPAFSSAAYTASTIASNRDV*VSPLFWSRTVVPGWN 1626
Score = 39.1 bits (79), Expect(3) = 2e-061
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +1 / +1
Query: 253 AXGXRXSPNVYPYFAYRDNPRDIS 324
+ G NVYPYFAYRDNP IS
Sbjct: 1540 STGAPLLANVYPYFAYRDNPGSIS 1611
Score = 27.2 bits (53), Expect(3) = 2e-033
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3 / -2
Query: 322 *CRAGCPGTRSKGTR 278
*C GC GTRS+G R
Sbjct: 1609 *CSRGCHGTRSRGRR 1565
Score = 24.9 bits (48), Expect(3) = 2e-033
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -3 / -1
Query: 286 GTRLAXXGXPVPAK*RATSRMYPSRRTP 203
G LA G PV A+ RATS M TP
Sbjct: 1574 G*TLASSGAPVLARSRATSVM*AFLNTP 1491
Score = 22.1 bits (42), Expect(3) = 2e-061
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +3
Query: 328 VRHVPAGHH 354
+R VPAGHH
Sbjct: 1617 LRDVPAGHH 1643
>emb|AJ271367.1|HVU271367 Hordeum vulgare mRNA for beta-1,3-glucanase
Length = 1257
Score = 214 bits (461), Expect(3) = 2e-061
Identities = 88/120 (73%), Positives = 98/120 (81%)
Frame = +2 / +2
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDN 517
FQPGTTVRD NGL Y +LFDAMVDAV AALEKAGAP V+VVVSE GWPSAGGF AS N
Sbjct: 692 FQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAGGFAASAGN 871
Query: 518 ARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
AR YNQGLI+HVG GTPK+ LET++FAMFNENQK GD TE++FGLF +K P Y I+F
Sbjct: 872 ARTYNQGLINHVGGGTPKKREALETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNIQF 1051
Score = 128 bits (275), Expect(3) = 2e-033
Identities = 59/116 (50%), Positives = 61/116 (52%)
Frame = -1 / -1
Query: 684 YTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTL 505
Y G L K PK SV SP FWFSLNMAK VSS LGVP PTW +SPWLY RAL
Sbjct: 1038 YAGDLSGLKSPKLLSVASPVFWFSLNMAKMYVSSASRFLGVPPPTWLISPWLYVRALPAD 859
Query: 504 APKPPAEGQPXSDTTTLTLGXXXXXXXXXXXXXXXSNXXXXXXXXXXXLTVVPGWN 337
A PPA+G P SDTTT T G SN TVVPGWN
Sbjct: 858 AANPPADGHPLSDTTTFTAGAPAFSSAAYTASTIASNRDV*VSPLFWSRTVVPGWN 691
Score = 39.1 bits (79), Expect(3) = 2e-061
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +1 / +2
Query: 253 AXGXRXSPNVYPYFAYRDNPRDIS 324
+ G NVYPYFAYRDNP IS
Sbjct: 605 STGAPLLANVYPYFAYRDNPGSIS 676
Score = 27.2 bits (53), Expect(3) = 2e-033
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3 / -2
Query: 322 *CRAGCPGTRSKGTR 278
*C GC GTRS+G R
Sbjct: 674 *CSRGCHGTRSRGRR 630
Score = 24.9 bits (48), Expect(3) = 2e-033
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -3 / -1
Query: 286 GTRLAXXGXPVPAK*RATSRMYPSRRTP 203
G LA G PV A+ RATS M TP
Sbjct: 639 G*TLASSGAPVLARSRATSVM*AFLNTP 556
Score = 22.1 bits (42), Expect(3) = 2e-061
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 328 VRHVPAGHH 354
+R VPAGHH
Sbjct: 682 LRDVPAGHH 708
>gb|AF515785.1| Hordeum vulgare subsp. vulgare beta-1,3-glucanase II mRNA, complete
cds
Length = 1215
Score = 214 bits (461), Expect(3) = 2e-061
Identities = 88/120 (73%), Positives = 98/120 (81%)
Frame = +2 / +2
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDN 517
FQPGTTVRD NGL Y +LFDAMVDAV AALEKAGAP V+VVVSE GWPSAGGF AS N
Sbjct: 689 FQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAGGFAASAGN 868
Query: 518 ARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
AR YNQGLI+HVG GTPK+ LET++FAMFNENQK GD TE++FGLF +K P Y I+F
Sbjct: 869 ARTYNQGLINHVGGGTPKKREALETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNIQF 1048
Score = 128 bits (275), Expect(3) = 2e-033
Identities = 59/116 (50%), Positives = 61/116 (52%)
Frame = -1 / -1
Query: 684 YTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTL 505
Y G L K PK SV SP FWFSLNMAK VSS LGVP PTW +SPWLY RAL
Sbjct: 1035 YAGDLSGLKSPKLLSVASPVFWFSLNMAKMYVSSASRFLGVPPPTWLISPWLYVRALPAD 856
Query: 504 APKPPAEGQPXSDTTTLTLGXXXXXXXXXXXXXXXSNXXXXXXXXXXXLTVVPGWN 337
A PPA+G P SDTTT T G SN TVVPGWN
Sbjct: 855 AANPPADGHPLSDTTTFTAGAPAFSSAAYTASTIASNRDV*VSPLFWSRTVVPGWN 688
Score = 39.1 bits (79), Expect(3) = 2e-061
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +1 / +2
Query: 253 AXGXRXSPNVYPYFAYRDNPRDIS 324
+ G NVYPYFAYRDNP IS
Sbjct: 602 STGAPLLANVYPYFAYRDNPGSIS 673
Score = 27.2 bits (53), Expect(3) = 2e-033
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3 / -2
Query: 322 *CRAGCPGTRSKGTR 278
*C GC GTRS+G R
Sbjct: 671 *CSRGCHGTRSRGRR 627
Score = 24.9 bits (48), Expect(3) = 2e-033
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -3 / -1
Query: 286 GTRLAXXGXPVPAK*RATSRMYPSRRTP 203
G LA G PV A+ RATS M TP
Sbjct: 636 G*TLASSGAPVLARSRATSVM*AFLNTP 553
Score = 22.1 bits (42), Expect(3) = 2e-061
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 328 VRHVPAGHH 354
+R VPAGHH
Sbjct: 679 LRDVPAGHH 705
>gb|BE601595.2|BE601595 HVSMEh0098M24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0098M24f, mRNA sequence
Length = 636
Score = 214 bits (461), Expect(3) = 2e-061
Identities = 88/120 (73%), Positives = 98/120 (81%)
Frame = +2 / +2
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDN 517
FQPGTTVRD NGL Y +LFDAMVDAV AALEKAGAP V+VVVSE GWPSAGGF AS N
Sbjct: 131 FQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAGGFAASAGN 310
Query: 518 ARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
AR YNQGLI+HVG GTPK+ LET++FAMFNENQK GD TE++FGLF +K P Y I+F
Sbjct: 311 ARTYNQGLINHVGGGTPKKREALETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNIQF 490
Score = 128 bits (275), Expect(3) = 4e-033
Identities = 59/116 (50%), Positives = 61/116 (52%)
Frame = -1 / -1
Query: 684 YTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTL 505
Y G L K PK SV SP FWFSLNMAK VSS LGVP PTW +SPWLY RAL
Sbjct: 477 YAGDLSGLKSPKLLSVASPVFWFSLNMAKMYVSSASRFLGVPPPTWLISPWLYVRALPAD 298
Query: 504 APKPPAEGQPXSDTTTLTLGXXXXXXXXXXXXXXXSNXXXXXXXXXXXLTVVPGWN 337
A PPA+G P SDTTT T G SN TVVPGWN
Sbjct: 297 AANPPADGHPLSDTTTFTAGAPAFSSAAYTASTIASNRDV*VSPLFWSRTVVPGWN 130
Score = 39.1 bits (79), Expect(3) = 2e-061
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +1 / +2
Query: 253 AXGXRXSPNVYPYFAYRDNPRDIS 324
+ G NVYPYFAYRDNP IS
Sbjct: 44 STGAPLLANVYPYFAYRDNPGSIS 115
Score = 27.2 bits (53), Expect(3) = 4e-033
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3 / -2
Query: 322 *CRAGCPGTRSKGTR 278
*C GC GTRS+G R
Sbjct: 113 *CSRGCHGTRSRGRR 69
Score = 23.5 bits (45), Expect(3) = 4e-033
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -3 / -1
Query: 286 GTRLAXXGXPVPAK*RATSRM 224
G LA G PV A+ RATS M
Sbjct: 78 G*TLASSGAPVLARSRATSVM 16
Score = 22.1 bits (42), Expect(3) = 2e-061
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 328 VRHVPAGHH 354
+R VPAGHH
Sbjct: 121 LRDVPAGHH 147
>gb|BU981210.1|BU981210 HA22P03r HA Hordeum vulgare subsp. vulgare cDNA clone HA22P03
5-PRIME, mRNA sequence
Length = 566
Score = 217 bits (469), Expect(2) = 3e-061
Identities = 88/118 (74%), Positives = 97/118 (82%)
Frame = +2 / +3
Query: 350 TTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKY 529
T VRD GNG Y NLFDAMVDA+ AALEKAGAP VRVVVSE GWPSAGGF A+ +NAR Y
Sbjct: 180 TAVRDAGNGHVYTNLFDAMVDAMYAALEKAGAPGVRVVVSETGWPSAGGFAATPENARAY 359
Query: 530 NQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN* 703
NQG+IDHV RGTP R GP+E +VFAMFNEN K GD TE+NFGLFY NK PVYP++F *
Sbjct: 360 NQGMIDHVARGTPNRPGPIEAYVFAMFNENMKPGDETERNFGLFYPNKSPVYPMKFK* 533
Score = 127 bits (272), Expect(2) = 2e-029
Identities = 57/85 (67%), Positives = 61/85 (71%)
Frame = -1 / -2
Query: 699 LNRIGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFR 520
LN +G TG LL *K PKF SV SP F FSLNMA T S GP LLGVPR TWS+ PWLY R
Sbjct: 529 LNFMG*TGDLLG*KSPKFLSVSSPGFMFSLNMANT*ASMGPGLLGVPRATWSIMPWLYAR 350
Query: 519 ALSTLAPKPPAEGQPXSDTTTLTLG 445
A S +A PPA+G P SDTTTLT G
Sbjct: 349 AFSGVAANPPADGHPVSDTTTLTPG 275
Score = 38.2 bits (77), Expect(2) = 3e-061
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +1 / +3
Query: 193 PAXKGSFGKGTCGTSRATWRAXGXRXSPNVYPYFAYRDNPRDI 321
P F + G A G NVYPY AYR++PRDI
Sbjct: 18 PPSAAVFAQPYMGDVARLLAATGAPLLANVYPYIAYRNSPRDI 146
Score = 24.0 bits (46), Expect(2) = 2e-029
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3 / -2
Query: 286 GTRLAXXGXPVPAK*RATSRM 224
G LA G PV A RATS M
Sbjct: 112 G*TLASSGAPVAASSRATSPM 50
>gb|CB879505.1|CB879505 HP02I04w HP Hordeum vulgare subsp. vulgare cDNA clone HP02I04
3-PRIME, mRNA sequence
Length = 680
Score = 210 bits (452), Expect(3) = 4e-061
Identities = 89/120 (74%), Positives = 96/120 (80%)
Frame = +2 / -3
Query: 350 TTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKY 529
TTVRD GL Y LFDAMVDAVVAALE+AGAP VRVVVSE GWPSA GF A+ DNAR Y
Sbjct: 540 TTVRDPNTGLTYTCLFDAMVDAVVAALERAGAPGVRVVVSESGWPSASGFAATADNARAY 361
Query: 530 NQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN*LR 709
NQGLIDHVG GTPKR G LET++FAMFNEN K G+ TEK+FGLF +K P YPIRF * R
Sbjct: 360 NQGLIDHVGGGTPKRPGALETYIFAMFNENFKTGELTEKHFGLFNPDKSPAYPIRFQ*RR 181
Score = 119 bits (254), Expect(4) = 6e-031
Identities = 55/101 (54%), Positives = 60/101 (59%)
Frame = -1 / +2
Query: 696 NRIGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRA 517
NR+GY G L PK FSV SP FSLNMAK VS+ P LLGVP PTWS+SPWLY A
Sbjct: 194 NRMGYAGDLSGLNSPKCFSVSSPVLKFSLNMAKMYVSNAPGLLGVPPPTWSISPWLYALA 373
Query: 516 LSTLAPKPPAEGQPXSDTTTLTLGXXXXXXXXXXXXXXXSN 394
LS +A P A+G P SDTTTLT G SN
Sbjct: 374 LSAVAANPLADGHPLSDTTTLTPGAPARSSAATTASTMASN 496
Score = 41.8 bits (85), Expect(3) = 4e-061
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1 / -3
Query: 253 AXGXRXSPNVYPYFAYRDNPRDI 321
+ G NVYPYFAY+DNPRDI
Sbjct: 642 STGAPLLTNVYPYFAYKDNPRDI 574
Score = 28.6 bits (56), Expect(4) = 6e-031
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3 / +3
Query: 319 CRAGCPGTRSKGTR 278
C AGCP RS+GTR
Sbjct: 576 CPAGCPCRRSRGTR 617
Score = 24.0 bits (46), Expect(4) = 6e-031
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1 / +3
Query: 867 LFIHHI*IEYVHTS*LHRSSTSPAGHMHAAAYSCSI 760
+++H ++YVH S L R +H +SC I
Sbjct: 24 IWLHTSLLQYVHASYLGRYIDVYVYSIHVTLHSCII 131
Score = 22.1 bits (42), Expect(3) = 4e-061
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / -2
Query: 328 VRHVPAGHH 354
+R VPAGHH
Sbjct: 565 LRDVPAGHH 539
Score = 21.7 bits (41), Expect(4) = 6e-031
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3 / +2
Query: 286 GTRLAXXGXPVPAK*RATSRM 224
G L G PV A RATS M
Sbjct: 608 GYTLVSSGAPVLASSRATSVM 670
>gb|CB877331.1|CB877331 HP04H07T HP Hordeum vulgare subsp. vulgare cDNA clone HP04H07
5-PRIME, mRNA sequence
Length = 549
Score = 210 bits (452), Expect(3) = 1e-058
Identities = 89/120 (74%), Positives = 96/120 (80%)
Frame = +2 / +3
Query: 350 TTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKY 529
TTVRD GL Y LFDAMVDAVVAALE+AGAP VRVVVSE GWPSA GF A+ DNAR Y
Sbjct: 96 TTVRDPNTGLTYTCLFDAMVDAVVAALERAGAPGVRVVVSESGWPSASGFAATADNARAY 275
Query: 530 NQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN*LR 709
NQGLIDHVG GTPKR G LET++FAMFNEN K G+ TEK+FGLF +K P YPIRF * R
Sbjct: 276 NQGLIDHVGGGTPKRPGALETYIFAMFNENFKTGELTEKHFGLFNPDKSPAYPIRFQ*RR 455
Score = 119 bits (254), Expect(2) = 2e-027
Identities = 55/101 (54%), Positives = 60/101 (59%)
Frame = -1 / -3
Query: 696 NRIGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRA 517
NR+GY G L PK FSV SP FSLNMAK VS+ P LLGVP PTWS+SPWLY A
Sbjct: 442 NRMGYAGDLSGLNSPKCFSVSSPVLKFSLNMAKMYVSNAPGLLGVPPPTWSISPWLYALA 263
Query: 516 LSTLAPKPPAEGQPXSDTTTLTLGXXXXXXXXXXXXXXXSN 394
LS +A P A+G P SDTTTLT G SN
Sbjct: 262 LSAVAANPLADGHPLSDTTTLTPGAPARSSAATTASTMASN 140
Score = 33.6 bits (67), Expect(3) = 1e-058
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 259 GXRXSPNVYPYFAYRDN 309
G R NVYPYFAY+DN
Sbjct: 1 GCRLLTNVYPYFAYKDN 51
Score = 23.5 bits (45), Expect(2) = 2e-027
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 310 GCPGTRSKGTR 278
GCP RS+GTR
Sbjct: 52 GCPCRRSRGTR 20
Score = 22.1 bits (42), Expect(3) = 1e-058
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 328 VRHVPAGHH 354
+R VPAGHH
Sbjct: 71 LRDVPAGHH 97
>gb|BF263831.2|BF263831 HV_CEa0007M17f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007M17f, mRNA sequence
Length = 442
Score = 210 bits (453), Expect(2) = 5e-057
Identities = 87/118 (73%), Positives = 95/118 (80%)
Frame = +2 / +3
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDN 517
FQPG TVRD+ NGL Y LFDAMVDAVVAALE+AGAP VRVVVSE GWPS GF A+ DN
Sbjct: 87 FQPGPTVRDDKNGLTYTCLFDAMVDAVVAALERAGAPGVRVVVSESGWPSMSGFAATADN 266
Query: 518 ARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPI 691
AR YNQGLIDHVG GTPKR G LET++FAMFNEN K G+ EK+FGLF +K P YPI
Sbjct: 267 ARAYNQGLIDHVGGGTPKRRGALETYIFAMFNENLKRGELVEKHFGLFNPDKSPAYPI 440
Score = 125 bits (267), Expect = 4e-028
Identities = 60/118 (50%), Positives = 63/118 (53%)
Frame = -1 / -1
Query: 693 RIGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRAL 514
RIGY G L PK FS SP F FSLNMAK VSS P LLGVP PTWS+SPWLY AL
Sbjct: 442 RIGYAGDLSGLNSPKCFSTSSPLFKFSLNMAKMYVSSAPRLLGVPPPTWSISPWLYALAL 263
Query: 513 STLAPKPPAEGQPXSDTTTLTLGXXXXXXXXXXXXXXXSNXXXXXXXXXXXLTVVPGW 340
S +A P +G P SDTTTLT G SN TV PGW
Sbjct: 262 SAVAANPLIDGHPLSDTTTLTPGAPALSSAATTASTMASNRHV*VSPFLSSRTVGPGW 89
Score = 31.3 bits (62), Expect(2) = 5e-057
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1 / +3
Query: 277 NVYPYFAYRDNPRDI 321
NVYPYFAY+ +P++I
Sbjct: 24 NVYPYFAYKRDPQNI 68
>gb|BJ461506.1|BJ461506 BJ461506 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45f07 3', mRNA sequence
Length = 662
Score = 208 bits (449), Expect(2) = 9e-057
Identities = 83/120 (69%), Positives = 93/120 (77%)
Frame = +2 / -3
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDN 517
F PGTTV D+GNGL Y NLFDAMVD++ AALE A P V++VVSE GWPSA GFGA+ N
Sbjct: 486 FAPGTTVNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPSASGFGATAQN 307
Query: 518 ARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
A+ YNQGLI+HVG GTPKR GPLET++FAMFNEN K GD EKNFGLF N P Y I F
Sbjct: 306 AQAYNQGLINHVGNGTPKRPGPLETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAITF 127
Score = 102 bits (218), Expect(2) = 2e-021
Identities = 43/70 (61%), Positives = 49/70 (70%)
Frame = -1 / +2
Query: 654 PKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPAEGQP 475
PKFFS SP FSLNMAK VS+GP LLGVP PTW ++PWLY A +AP P A+G P
Sbjct: 170 PKFFSSSSPSLRFSLNMAKIYVSNGPGLLGVPFPTWLINPWLYACAFCAVAPNPLADGHP 349
Query: 474 XSDTTTLTLG 445
SDTT+ T G
Sbjct: 350 LSDTTSFTPG 379
Score = 32.2 bits (64), Expect(2) = 9e-057
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1 / -3
Query: 253 AXGXRXSPNVYPYFAYRDNPRDI 321
+ G NVYPYFAY+ +P++I
Sbjct: 573 STGAPLLANVYPYFAYKGDPQNI 505
Score = 22.1 bits (42), Expect(2) = 2e-021
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2 / +1
Query: 287 GYTFGXXRXPXARQVARDVPHV 222
G G R ARQ +D PHV
Sbjct: 538 GVHVGQQRRAGARQEIQDGPHV 603
>gb|AV911030.1|AV911030 AV911030 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11m15 3', mRNA sequence
Length = 649
Score = 208 bits (449), Expect(2) = 9e-057
Identities = 83/120 (69%), Positives = 93/120 (77%)
Frame = +2 / -1
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDN 517
F PGTTV D+GNGL Y NLFDAMVD++ AALE A P V++VVSE GWPSA GFGA+ N
Sbjct: 547 FAPGTTVNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPSASGFGATAQN 368
Query: 518 ARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
A+ YNQGLI+HVG GTPKR GPLET++FAMFNEN K GD EKNFGLF N P Y I F
Sbjct: 367 AQAYNQGLINHVGNGTPKRPGPLETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAITF 188
Score = 102 bits (218), Expect = 2e-021
Identities = 43/70 (61%), Positives = 49/70 (70%)
Frame = -1 / +3
Query: 654 PKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPAEGQP 475
PKFFS SP FSLNMAK VS+GP LLGVP PTW ++PWLY A +AP P A+G P
Sbjct: 231 PKFFSSSSPSLRFSLNMAKIYVSNGPGLLGVPFPTWLINPWLYACAFCAVAPNPLADGHP 410
Query: 474 XSDTTTLTLG 445
SDTT+ T G
Sbjct: 411 LSDTTSFTPG 440
Score = 32.2 bits (64), Expect(2) = 9e-057
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1 / -1
Query: 253 AXGXRXSPNVYPYFAYRDNPRDI 321
+ G NVYPYFAY+ +P++I
Sbjct: 634 STGAPLLANVYPYFAYKGDPQNI 566
>gb|BJ458099.1|BJ458099 BJ458099 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak30k14 3', mRNA sequence
Length = 640
Score = 208 bits (449), Expect(2) = 9e-057
Identities = 83/120 (69%), Positives = 93/120 (77%)
Frame = +2 / -2
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDN 517
F PGTTV D+GNGL Y NLFDAMVD++ AALE A P V++VVSE GWPSA GFGA+ N
Sbjct: 495 FAPGTTVNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPSASGFGATAQN 316
Query: 518 ARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
A+ YNQGLI+HVG GTPKR GPLET++FAMFNEN K GD EKNFGLF N P Y I F
Sbjct: 315 AQAYNQGLINHVGNGTPKRPGPLETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAITF 136
Score = 102 bits (218), Expect(2) = 2e-021
Identities = 43/70 (61%), Positives = 49/70 (70%)
Frame = -1 / +2
Query: 654 PKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPAEGQP 475
PKFFS SP FSLNMAK VS+GP LLGVP PTW ++PWLY A +AP P A+G P
Sbjct: 179 PKFFSSSSPSLRFSLNMAKIYVSNGPGLLGVPFPTWLINPWLYACAFCAVAPNPLADGHP 358
Query: 474 XSDTTTLTLG 445
SDTT+ T G
Sbjct: 359 LSDTTSFTPG 388
Score = 32.2 bits (64), Expect(2) = 9e-057
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1 / -2
Query: 253 AXGXRXSPNVYPYFAYRDNPRDI 321
+ G NVYPYFAY+ +P++I
Sbjct: 582 STGAPLLANVYPYFAYKGDPQNI 514
Score = 22.1 bits (42), Expect(2) = 2e-021
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2 / +1
Query: 287 GYTFGXXRXPXARQVARDVPHV 222
G G R ARQ +D PHV
Sbjct: 547 GVHVGQQRRAGARQEIQDGPHV 612
>gb|BJ460297.1|BJ460297 BJ460297 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40d22 3', mRNA sequence
Length = 574
Score = 208 bits (449), Expect(2) = 9e-057
Identities = 83/120 (69%), Positives = 93/120 (77%)
Frame = +2 / -1
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDN 517
F PGTTV D+GNGL Y NLFDAMVD++ AALE A P V++VVSE GWPSA GFGA+ N
Sbjct: 409 FAPGTTVNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPSASGFGATAQN 230
Query: 518 ARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
A+ YNQGLI+HVG GTPKR GPLET++FAMFNEN K GD EKNFGLF N P Y I F
Sbjct: 229 AQAYNQGLINHVGNGTPKRPGPLETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAITF 50
Score = 102 bits (218), Expect(2) = 1e-021
Identities = 43/70 (61%), Positives = 49/70 (70%)
Frame = -1 / +3
Query: 654 PKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPAEGQP 475
PKFFS SP FSLNMAK VS+GP LLGVP PTW ++PWLY A +AP P A+G P
Sbjct: 93 PKFFSSSSPSLRFSLNMAKIYVSNGPGLLGVPFPTWLINPWLYACAFCAVAPNPLADGHP 272
Query: 474 XSDTTTLTLG 445
SDTT+ T G
Sbjct: 273 LSDTTSFTPG 302
Score = 32.2 bits (64), Expect(2) = 9e-057
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1 / -1
Query: 253 AXGXRXSPNVYPYFAYRDNPRDI 321
+ G NVYPYFAY+ +P++I
Sbjct: 496 STGAPLLANVYPYFAYKGDPQNI 428
Score = 22.1 bits (42), Expect(2) = 1e-021
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2 / +2
Query: 287 GYTFGXXRXPXARQVARDVPHV 222
G G R ARQ +D PHV
Sbjct: 461 GVHVGQQRRAGARQEIQDGPHV 526
>gb|BJ452749.1|BJ452749 BJ452749 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40d22 5', mRNA sequence
Length = 553
Score = 208 bits (449), Expect(2) = 9e-057
Identities = 83/120 (69%), Positives = 93/120 (77%)
Frame = +2 / +3
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDN 517
F PGTTV D+GNGL Y NLFDAMVD++ AALE A P V++VVSE GWPSA GFGA+ N
Sbjct: 186 FAPGTTVNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPSASGFGATAQN 365
Query: 518 ARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
A+ YNQGLI+HVG GTPKR GPLET++FAMFNEN K GD EKNFGLF N P Y I F
Sbjct: 366 AQAYNQGLINHVGNGTPKRPGPLETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAITF 545
Score = 102 bits (218), Expect(2) = 1e-021
Identities = 43/70 (61%), Positives = 49/70 (70%)
Frame = -1 / -1
Query: 654 PKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPAEGQP 475
PKFFS SP FSLNMAK VS+GP LLGVP PTW ++PWLY A +AP P A+G P
Sbjct: 502 PKFFSSSSPSLRFSLNMAKIYVSNGPGLLGVPFPTWLINPWLYACAFCAVAPNPLADGHP 323
Query: 474 XSDTTTLTLG 445
SDTT+ T G
Sbjct: 322 LSDTTSFTPG 293
Score = 32.2 bits (64), Expect(2) = 9e-057
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1 / +3
Query: 253 AXGXRXSPNVYPYFAYRDNPRDI 321
+ G NVYPYFAY+ +P++I
Sbjct: 99 STGAPLLANVYPYFAYKGDPQNI 167
Score = 22.1 bits (42), Expect(2) = 1e-021
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2 / -3
Query: 287 GYTFGXXRXPXARQVARDVPHV 222
G G R ARQ +D PHV
Sbjct: 134 GVHVGQQRRAGARQEIQDGPHV 69
>gb|BJ452679.1|BJ452679 BJ452679 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak39p16 5', mRNA sequence
Length = 598
Score = 207 bits (446), Expect(2) = 2e-056
Identities = 83/120 (69%), Positives = 92/120 (76%)
Frame = +2 / +3
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDN 517
F PGTTV D+GNGL Y NLFDAMVD+ AALE A P V++VVSE GWPSA GFGA+ N
Sbjct: 174 FAPGTTVNDDGNGLTYTNLFDAMVDSTYAALEDANKPGVKLVVSESGWPSASGFGATAQN 353
Query: 518 ARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
A+ YNQGLI+HVG GTPKR GPLET++FAMFNEN K GD EKNFGLF N P Y I F
Sbjct: 354 AQAYNQGLINHVGNGTPKRPGPLETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAITF 533
Score = 102 bits (218), Expect(2) = 1e-021
Identities = 43/70 (61%), Positives = 49/70 (70%)
Frame = -1 / -1
Query: 654 PKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPAEGQP 475
PKFFS SP FSLNMAK VS+GP LLGVP PTW ++PWLY A +AP P A+G P
Sbjct: 490 PKFFSSSSPSLRFSLNMAKIYVSNGPGLLGVPFPTWLINPWLYACAFCAVAPNPLADGHP 311
Query: 474 XSDTTTLTLG 445
SDTT+ T G
Sbjct: 310 LSDTTSFTPG 281
Score = 32.2 bits (64), Expect(2) = 2e-056
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1 / +3
Query: 253 AXGXRXSPNVYPYFAYRDNPRDI 321
+ G NVYPYFAY+ +P++I
Sbjct: 87 STGAPLLANVYPYFAYKGDPQNI 155
Score = 22.1 bits (42), Expect(2) = 1e-021
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2 / -3
Query: 287 GYTFGXXRXPXARQVARDVPHV 222
G G R ARQ +D PHV
Sbjct: 122 GVHVGQQRRAGARQEIQDGPHV 57
>gb|AL510583.1|AL510583 AL510583 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05G08u 3',
mRNA sequence
Length = 658
Score = 217 bits (469), Expect = 6e-056
Identities = 88/118 (74%), Positives = 97/118 (82%)
Frame = +2 / -2
Query: 350 TTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKY 529
T VRD GNG Y NLFDAMVDA+ AALEKAGAP VRVVVSE GWPSAGGF A+ +NAR Y
Sbjct: 501 TAVRDAGNGHVYTNLFDAMVDAMYAALEKAGAPGVRVVVSETGWPSAGGFAATPENARAY 322
Query: 530 NQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN* 703
NQG+IDHV RGTP R GP+E +VFAMFNEN K GD TE+NFGLFY NK PVYP++F *
Sbjct: 321 NQGMIDHVARGTPNRPGPIEAYVFAMFNENMKPGDETERNFGLFYPNKSPVYPMKFK* 148
Score = 127 bits (272), Expect = 8e-029
Identities = 57/85 (67%), Positives = 61/85 (71%)
Frame = -1 / +2
Query: 699 LNRIGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFR 520
LN +G TG LL *K PKF SV SP F FSLNMA T S GP LLGVPR TWS+ PWLY R
Sbjct: 152 LNFMG*TGDLLG*KSPKFLSVSSPGFMFSLNMANT*ASMGPGLLGVPRATWSIMPWLYAR 331
Query: 519 ALSTLAPKPPAEGQPXSDTTTLTLG 445
A S +A PPA+G P SDTTTLT G
Sbjct: 332 AFSGVAANPPADGHPVSDTTTLTPG 406
>gb|CB879474.1|CB879474 HP02G13w HP Hordeum vulgare subsp. vulgare cDNA clone HP02G13
3-PRIME, mRNA sequence
Length = 682
Score = 210 bits (452), Expect(3) = 7e-056
Identities = 89/120 (74%), Positives = 96/120 (80%)
Frame = +2 / -1
Query: 350 TTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKY 529
TTVRD GL Y LFDAMVDAVVAALE+AGAP VRVVVSE GWPSA GF A+ DNAR Y
Sbjct: 613 TTVRDPNTGLTYTCLFDAMVDAVVAALERAGAPGVRVVVSESGWPSASGFAATADNARAY 434
Query: 530 NQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN*LR 709
NQGLIDHVG GTPKR G LET++FAMFNEN K G+ TEK+FGLF +K P YPIRF * R
Sbjct: 433 NQGLIDHVGGGTPKRPGALETYIFAMFNENFKTGELTEKHFGLFNPDKSPAYPIRFQ*RR 254
Score = 119 bits (254), Expect(2) = 1e-027
Identities = 55/101 (54%), Positives = 60/101 (59%)
Frame = -1 / +3
Query: 696 NRIGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRA 517
NR+GY G L PK FSV SP FSLNMAK VS+ P LLGVP PTWS+SPWLY A
Sbjct: 267 NRMGYAGDLSGLNSPKCFSVSSPVLKFSLNMAKMYVSNAPGLLGVPPPTWSISPWLYALA 446
Query: 516 LSTLAPKPPAEGQPXSDTTTLTLGXXXXXXXXXXXXXXXSN 394
LS +A P A+G P SDTTTLT G SN
Sbjct: 447 LSAVAANPLADGHPLSDTTTLTPGAPARSSAATTASTMASN 569
Score = 24.4 bits (47), Expect(3) = 7e-056
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / -1
Query: 295 AYRDNPRDI 321
AY+DNPRDI
Sbjct: 673 AYKDNPRDI 647
Score = 24.0 bits (46), Expect(2) = 1e-027
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1 / +1
Query: 867 LFIHHI*IEYVHTS*LHRSSTSPAGHMHAAAYSCSI 760
+++H ++YVH S L R +H +SC I
Sbjct: 97 IWLHTSLLQYVHASYLGRYIDVYVYSIHVTLHSCII 204
Score = 22.1 bits (42), Expect(3) = 7e-056
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / -3
Query: 328 VRHVPAGHH 354
+R VPAGHH
Sbjct: 638 LRDVPAGHH 612
>gb|BJ456958.1|BJ456958 BJ456958 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25g07 3', mRNA sequence
Length = 464
Score = 204 bits (441), Expect(2) = 1e-055
Identities = 81/116 (69%), Positives = 91/116 (78%)
Frame = +2 / -3
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDN 517
F PGTTV D+GNGL Y NLFDAMVD++ AALE A P V++VVSE GWPSA GFGA+ N
Sbjct: 351 FAPGTTVNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPSASGFGATAQN 172
Query: 518 ARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVY 685
A+ YNQGLI+HVG GTPKR GPLET++FAMFNEN K GD EKNFGLF N P Y
Sbjct: 171 AQAYNQGLINHVGNGTPKRPGPLETYIFAMFNENLKDGDELEKNFGLFKPNMSPAY 4
Score = 102 bits (218), Expect = 2e-021
Identities = 43/70 (61%), Positives = 49/70 (70%)
Frame = -1 / +2
Query: 654 PKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPAEGQP 475
PKFFS SP FSLNMAK VS+GP LLGVP PTW ++PWLY A +AP P A+G P
Sbjct: 35 PKFFSSSSPSLRFSLNMAKIYVSNGPGLLGVPFPTWLINPWLYACAFCAVAPNPLADGHP 214
Query: 474 XSDTTTLTLG 445
SDTT+ T G
Sbjct: 215 LSDTTSFTPG 244
Score = 32.2 bits (64), Expect(2) = 1e-055
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1 / -3
Query: 253 AXGXRXSPNVYPYFAYRDNPRDI 321
+ G NVYPYFAY+ +P++I
Sbjct: 438 STGAPLLANVYPYFAYKGDPQNI 370
>gb|CB876783.1|CB876783 HP02G13T HP Hordeum vulgare subsp. vulgare cDNA clone HP02G13
5-PRIME, mRNA sequence
Length = 606
Score = 210 bits (452), Expect(2) = 4e-054
Identities = 89/120 (74%), Positives = 96/120 (80%)
Frame = +2 / +2
Query: 350 TTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKY 529
TTVRD GL Y LFDAMVDAVVAALE+AGAP VRVVVSE GWPSA GF A+ DNAR Y
Sbjct: 56 TTVRDPNTGLTYTCLFDAMVDAVVAALERAGAPGVRVVVSESGWPSASGFAATADNARAY 235
Query: 530 NQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN*LR 709
NQGLIDHVG GTPKR G LET++FAMFNEN K G+ TEK+FGLF +K P YPIRF * R
Sbjct: 236 NQGLIDHVGGGTPKRPGALETYIFAMFNENFKTGELTEKHFGLFNPDKSPAYPIRFQ*RR 415
Score = 119 bits (254), Expect(2) = 1e-027
Identities = 55/101 (54%), Positives = 60/101 (59%)
Frame = -1 / -1
Query: 696 NRIGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRA 517
NR+GY G L PK FSV SP FSLNMAK VS+ P LLGVP PTWS+SPWLY A
Sbjct: 402 NRMGYAGDLSGLNSPKCFSVSSPVLKFSLNMAKMYVSNAPGLLGVPPPTWSISPWLYALA 223
Query: 516 LSTLAPKPPAEGQPXSDTTTLTLGXXXXXXXXXXXXXXXSN 394
LS +A P A+G P SDTTTLT G SN
Sbjct: 222 LSAVAANPLADGHPLSDTTTLTPGAPARSSAATTASTMASN 100
Score = 24.0 bits (46), Expect(2) = 1e-027
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1 / -2
Query: 867 LFIHHI*IEYVHTS*LHRSSTSPAGHMHAAAYSCSI 760
+++H ++YVH S L R +H +SC I
Sbjct: 572 IWLHTSLLQYVHASYLGRYIDVYVYSIHVTLHSCII 465
Score = 22.1 bits (42), Expect(2) = 4e-054
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 328 VRHVPAGHH 354
+R VPAGHH
Sbjct: 31 LRDVPAGHH 57
>gb|AV931182.1|AV931182 AV931182 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18n18 3', mRNA sequence
Length = 690
Score = 191 bits (411), Expect(2) = 2e-053
Identities = 76/111 (68%), Positives = 86/111 (77%)
Frame = +2 / -3
Query: 365 NGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLI 544
N NGL Y NLFDAMVD++ AALEKAG P V+VV+SE GWPS GFGA+ NAR YNQGLI
Sbjct: 499 NDNGLTYTNLFDAMVDSIYAALEKAGTPGVKVVISESGWPSDQGFGATAQNARAYNQGLI 320
Query: 545 DHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
+HVG GTPK++G LET++FAMFNEN K GD EKNFGLF N P Y I F
Sbjct: 319 NHVGNGTPKKSGALETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAITF 167
Score = 101 bits (215), Expect(2) = 1e-023
Identities = 42/70 (60%), Positives = 48/70 (68%)
Frame = -1 / +3
Query: 654 PKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPAEGQP 475
PKFFS SP FSLNMAK VS+ P LGVP PTW ++PWLY RA +AP P ++G P
Sbjct: 210 PKFFSSSSPSLRFSLNMAKIYVSNAPDFLGVPLPTWLINPWLYARAFCAVAPNPWSDGHP 389
Query: 474 XSDTTTLTLG 445
SD TTLT G
Sbjct: 390 LSDMTTLTPG 419
Score = 38.6 bits (78), Expect(2) = 2e-053
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1 / -3
Query: 253 AXGXRXSPNVYPYFAYRDNPRDI 321
+ G NVYPYFAY+ NPRDI
Sbjct: 610 STGAPLLANVYPYFAYKGNPRDI 542
Score = 28.6 bits (56), Expect(2) = 1e-023
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3 / +1
Query: 319 CRAGCPGTRSKGTR 278
C AGCP RS+GTR
Sbjct: 544 CPAGCPCRRSRGTR 585
>gb|BU981251.1|BU981251 HA23B03r HA Hordeum vulgare subsp. vulgare cDNA clone HA23B03
5-PRIME, mRNA sequence
Length = 487
Score = 189 bits (408), Expect(2) = 6e-053
Identities = 77/102 (75%), Positives = 84/102 (82%)
Frame = +2 / +3
Query: 350 TTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKY 529
T VRD GNG Y NLFDAMVDA+ AALEKAGAP VRVVVSE GWPSAGGF A+ +NAR Y
Sbjct: 180 TAVRDAGNGHVYTNLFDAMVDAMYAALEKAGAPGVRVVVSETGWPSAGGFAATPENARAY 359
Query: 530 NQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFG 655
NQG+IDHV RGTP R GP+E +VFAMFNEN K GD TE+NFG
Sbjct: 360 NQGMIDHVARGTPNRPGPIEAYVFAMFNENMKPGDETERNFG 485
Score = 114 bits (243), Expect(2) = 1e-025
Identities = 48/70 (68%), Positives = 51/70 (72%)
Frame = -1 / -1
Query: 654 PKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPAEGQP 475
PKF SV SP F FSLNMA T S GP LLGVPR TWS+ PWLY RA S +A PPA+G P
Sbjct: 484 PKFLSVSSPGFMFSLNMANT*ASMGPGLLGVPRATWSIMPWLYARAFSGVAANPPADGHP 305
Query: 474 XSDTTTLTLG 445
SDTTTLT G
Sbjct: 304 VSDTTTLTPG 275
Score = 38.2 bits (77), Expect(2) = 6e-053
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +1 / +3
Query: 193 PAXKGSFGKGTCGTSRATWRAXGXRXSPNVYPYFAYRDNPRDI 321
P F + G A G NVYPY AYR++PRDI
Sbjct: 18 PPSAAVFAQPYMGDVARLLAATGAPLLANVYPYIAYRNSPRDI 146
Score = 24.0 bits (46), Expect(2) = 1e-025
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3 / -1
Query: 286 GTRLAXXGXPVPAK*RATSRM 224
G LA G PV A RATS M
Sbjct: 112 G*TLASSGAPVAASSRATSPM 50
>gb|BJ449523.1|BJ449523 BJ449523 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak25g07 5', mRNA sequence
Length = 477
Score = 195 bits (420), Expect(2) = 9e-053
Identities = 77/107 (71%), Positives = 87/107 (81%)
Frame = +2 / +3
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDN 517
F PGTTV D+GNGL Y NLFDAMVD++ AALE A P V++VVSE GWPSA GFGA+ N
Sbjct: 156 FAPGTTVNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPSASGFGATAQN 335
Query: 518 ARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGL 658
A+ YNQGLI+HVG GTPKR GPLET++FAMFNEN K GD EKNFGL
Sbjct: 336 AQAYNQGLINHVGNGTPKRPGPLETYIFAMFNENLKDGDELEKNFGL 476
Score = 102 bits (218), Expect(2) = 1e-021
Identities = 43/70 (61%), Positives = 49/70 (70%)
Frame = -1 / -3
Query: 654 PKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPAEGQP 475
PKFFS SP FSLNMAK VS+GP LLGVP PTW ++PWLY A +AP P A+G P
Sbjct: 472 PKFFSSSSPSLRFSLNMAKIYVSNGPGLLGVPFPTWLINPWLYACAFCAVAPNPLADGHP 293
Query: 474 XSDTTTLTLG 445
SDTT+ T G
Sbjct: 292 LSDTTSFTPG 263
Score = 32.2 bits (64), Expect(2) = 9e-053
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1 / +3
Query: 253 AXGXRXSPNVYPYFAYRDNPRDI 321
+ G NVYPYFAY+ +P++I
Sbjct: 69 STGAPLLANVYPYFAYKGDPQNI 137
Score = 22.1 bits (42), Expect(2) = 1e-021
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -2 / -2
Query: 287 GYTFGXXRXPXARQVARDVPHV 222
G G R ARQ +D PHV
Sbjct: 104 GVHVGQQRRAGARQEIQDGPHV 39
>gb|BU980481.1|BU980481 HA20M14r HA Hordeum vulgare subsp. vulgare cDNA clone HA20M14
5-PRIME, mRNA sequence
Length = 502
Score = 176 bits (379), Expect(2) = 1e-051
Identities = 72/95 (75%), Positives = 78/95 (82%)
Frame = +2 / +3
Query: 350 TTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKY 529
T VRD GNG Y NLFDAMVDA+ AALEKAGAP VRVVVSE GWPSAGGF A+ +NAR Y
Sbjct: 213 TAVRDAGNGHVYTNLFDAMVDAMYAALEKAGAPGVRVVVSETGWPSAGGFAATPENARAY 392
Query: 530 NQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGD 634
NQG+IDHV RGTP R GP+E +VFAMFNEN K GD
Sbjct: 393 NQGMIDHVARGTPNRPGPIEAYVFAMFNENMKPGD 497
Score = 104 bits (221), Expect(2) = 1e-022
Identities = 44/65 (67%), Positives = 47/65 (72%)
Frame = -1 / -1
Query: 639 VGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPAEGQPXSDTT 460
V SP F FSLNMA T S GP LLGVPR TWS+ PWLY RA S +A PPA+G P SDTT
Sbjct: 502 VSSPGFMFSLNMANT*ASMGPGLLGVPRATWSIMPWLYARAFSGVAANPPADGHPVSDTT 323
Query: 459 TLTLG 445
TLT G
Sbjct: 322 TLTPG 308
Score = 47.3 bits (97), Expect(2) = 1e-051
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = +1 / +3
Query: 172 DVVANFVPAXKGSFGKGTCGTSRATWRAXGXRXSPNVYPYFAYRDNPRDI 321
DV+AN P F + G A G NVYPY AYR++PRDI
Sbjct: 30 DVIANSFPPSAAVFAQPYMGDVARLLAATGAPLLANVYPYIAYRNSPRDI 179
Score = 24.0 bits (46), Expect(2) = 1e-022
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3 / -1
Query: 286 GTRLAXXGXPVPAK*RATSRM 224
G LA G PV A RATS M
Sbjct: 145 G*TLASSGAPVAASSRATSPM 83
>gb|BF258041.2|BF258041 HVSMEf0014J07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0014J07f, mRNA sequence
Length = 570
Score = 176 bits (379), Expect(3) = 4e-051
Identities = 75/102 (73%), Positives = 80/102 (78%)
Frame = +2 / +2
Query: 350 TTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKY 529
TTVRD GL Y LFDAMVDAVVAALE+AGAP VRVVVSE GWPSA GF A+ DNAR Y
Sbjct: 158 TTVRDPNTGLTYTCLFDAMVDAVVAALERAGAPGVRVVVSESGWPSASGFAATADNARAY 337
Query: 530 NQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFG 655
NQGLIDHVG G PKR G LET++FAMFNEN K G+ TE G
Sbjct: 338 NQGLIDHVGGGHPKRPGALETYIFAMFNENFKTGELTENTSG 463
Score = 105 bits (223), Expect(3) = 1e-026
Identities = 47/89 (52%), Positives = 54/89 (60%)
Frame = -1 / -1
Query: 660 KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPAEG 481
++P+ FSV SP FSLNMAK VS+ P LLG P PTWS+SPWLY ALS +A P A+G
Sbjct: 468 EQPEVFSVSSPVLKFSLNMAKMYVSNAPGLLGWPPPTWSISPWLYALALSAVAANPLADG 289
Query: 480 QPXSDTTTLTLGXXXXXXXXXXXXXXXSN 394
P SDTTTLT G SN
Sbjct: 288 HPLSDTTTLTPGAPARSSAATTASTMASN 202
Score = 41.8 bits (85), Expect(3) = 4e-051
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1 / +2
Query: 253 AXGXRXSPNVYPYFAYRDNPRDI 321
+ G NVYPYFAY+DNPRDI
Sbjct: 56 STGAPLLTNVYPYFAYKDNPRDI 124
Score = 28.6 bits (56), Expect(3) = 1e-026
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3 / -2
Query: 319 CRAGCPGTRSKGTR 278
C AGCP RS+GTR
Sbjct: 122 CPAGCPCRRSRGTR 81
Score = 24.0 bits (46), Expect(3) = 1e-026
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3 / -1
Query: 286 GTRLAXXGXPVPAK*RATSRMYPSRRTP 203
G L G PV A RATS M TP
Sbjct: 90 GYTLVSSGAPVLASSRATSVM*ACANTP 7
Score = 22.1 bits (42), Expect(3) = 4e-051
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 328 VRHVPAGHH 354
+R VPAGHH
Sbjct: 133 LRDVPAGHH 159
>gb|BQ766640.1|BQ766640 EBro08_SQ006_O15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ006_O15 5', mRNA sequence
Length = 526
Score = 199 bits (429), Expect = 2e-050
Identities = 78/103 (75%), Positives = 89/103 (86%)
Frame = +2 / +3
Query: 389 NLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTP 568
+LFDAMVD++ AALEKAG PNVRVVVSE GWPSAGGFGASV+NAR YNQGLIDH+ GTP
Sbjct: 3 SLFDAMVDSIYAALEKAGTPNVRVVVSESGWPSAGGFGASVENARNYNQGLIDHIRSGTP 182
Query: 569 KRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
KR G +ET++FAMFNEN+K GD E+NFGLF+ NKQPVYP F
Sbjct: 183 KRPGAIETYIFAMFNENRKPGDEVERNFGLFFPNKQPVYPTTF 311
Score = 118 bits (253), Expect(3) = 4e-032
Identities = 52/82 (63%), Positives = 55/82 (67%)
Frame = -1 / -1
Query: 690 IGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALS 511
+G TGCLL K PKF S SP F FSLNMA VS P GVP WS+SPWL FRA S
Sbjct: 304 VG*TGCLLGKKSPKFLSTSSPGFLFSLNMANMYVSIAPGRFGVPLRMWSISPWL*FRAFS 125
Query: 510 TLAPKPPAEGQPXSDTTTLTLG 445
T AP PPA+G P SDTTTLT G
Sbjct: 124 TDAPNPPADGHPLSDTTTLTFG 59
Score = 30.4 bits (60), Expect(3) = 4e-032
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -3 / -3
Query: 466 HDDPDVGRAGLLERGDD 416
H PDV RAGLL+RG D
Sbjct: 80 HHHPDVRRAGLLQRGVD 30
Score = 27.2 bits (53), Expect(3) = 4e-032
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3 / -2
Query: 889 FLHQNSISFYSSYIDRVRAYKLIAPLLHK 803
F Q+ FY+SY++R +K+I+ +HK
Sbjct: 447 FRWQSMHPFYASYVNRR*LFKIIS*SIHK 361
>gb|CB878498.1|CB878498 HP08L24T HP Hordeum vulgare subsp. vulgare cDNA clone HP08L24
5-PRIME, mRNA sequence
Length = 575
Score = 194 bits (419), Expect = 4e-049
Identities = 82/109 (75%), Positives = 89/109 (81%)
Frame = +2 / +2
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y LFDAMVDAVVAALE+AGAP VRVVVSE GWPSA GF A+ DNAR YNQGLIDHVG G
Sbjct: 23 YTCLFDAMVDAVVAALERAGAPGVRVVVSESGWPSASGFAATADNARAYNQGLIDHVGGG 202
Query: 563 TPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN*LR 709
TPKR G LET++FAMFNEN K G+ TEK+FGLF +K P YPIRF * R
Sbjct: 203 TPKRPGALETYIFAMFNENFKTGELTEKHFGLFNPDKSPAYPIRFQ*RR 349
Score = 119 bits (254), Expect(2) = 1e-027
Identities = 55/101 (54%), Positives = 60/101 (59%)
Frame = -1 / -3
Query: 696 NRIGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRA 517
NR+GY G L PK FSV SP FSLNMAK VS+ P LLGVP PTWS+SPWLY A
Sbjct: 336 NRMGYAGDLSGLNSPKCFSVSSPVLKFSLNMAKMYVSNAPGLLGVPPPTWSISPWLYALA 157
Query: 516 LSTLAPKPPAEGQPXSDTTTLTLGXXXXXXXXXXXXXXXSN 394
LS +A P A+G P SDTTTLT G SN
Sbjct: 156 LSAVAANPLADGHPLSDTTTLTPGAPARSSAATTASTMASN 34
Score = 24.0 bits (46), Expect(2) = 1e-027
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1 / -1
Query: 867 LFIHHI*IEYVHTS*LHRSSTSPAGHMHAAAYSCSI 760
+++H ++YVH S L R +H +SC I
Sbjct: 506 IWLHTSLLQYVHASYLGRYIDVYVYSIHVTLHSCII 399
>gb|BJ460231.1|BJ460231 BJ460231 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak39p16 3', mRNA sequence
Length = 603
Score = 194 bits (418), Expect = 6e-049
Identities = 78/114 (68%), Positives = 87/114 (76%)
Frame = +2 / -1
Query: 356 VRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQ 535
V D+GNGL Y NLFDAMVD+ AALE A P V++VVSE GWPSA GFGA+ NA+ YNQ
Sbjct: 603 VNDDGNGLTYTNLFDAMVDSTYAALEDANKPGVKLVVSESGWPSASGFGATAQNAQAYNQ 424
Query: 536 GLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
GLI+HVG GTPKR GPLET++FAMFNEN K GD EKNFGLF N P Y I F
Sbjct: 423 GLINHVGNGTPKRPGPLETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAITF 262
Score = 102 bits (218), Expect = 2e-021
Identities = 43/70 (61%), Positives = 49/70 (70%)
Frame = -1 / +2
Query: 654 PKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPAEGQP 475
PKFFS SP FSLNMAK VS+GP LLGVP PTW ++PWLY A +AP P A+G P
Sbjct: 305 PKFFSSSSPSLRFSLNMAKIYVSNGPGLLGVPFPTWLINPWLYACAFCAVAPNPLADGHP 484
Query: 474 XSDTTTLTLG 445
SDTT+ T G
Sbjct: 485 LSDTTSFTPG 514
>gb|BF260325.2|BF260325 HVSMEf0021L05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021L05f, mRNA sequence
Length = 854
Score = 193 bits (417), Expect = 8e-049
Identities = 82/111 (73%), Positives = 89/111 (80%)
Frame = +2 / +2
Query: 377 LNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVG 556
L Y LFDAMVDAVVAALE+AGAP VRVVVSE GWPSA GF + DNAR YNQGLIDHVG
Sbjct: 2 LTYTCLFDAMVDAVVAALERAGAPGVRVVVSESGWPSASGFAVTADNARAYNQGLIDHVG 181
Query: 557 RGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRFN*LR 709
GTPKR G LET++FAMFNEN K G+ TEK+FGLF +K P YPIRF * R
Sbjct: 182 GGTPKRPGALETYIFAMFNENFKTGELTEKHFGLFNPDKLPAYPIRFQ*RR 334
Score = 117 bits (250), Expect = 9e-026
Identities = 54/101 (53%), Positives = 59/101 (58%)
Frame = -1 / -3
Query: 696 NRIGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRA 517
NR+GY G L PK FSV SP FSLNMAK VS+ P LLGVP PTWS+SPWLY A
Sbjct: 321 NRMGYAGNLSGLNSPKCFSVSSPVLKFSLNMAKMYVSNAPGLLGVPPPTWSISPWLYALA 142
Query: 516 LSTLAPKPPAEGQPXSDTTTLTLGXXXXXXXXXXXXXXXSN 394
LS + P A+G P SDTTTLT G SN
Sbjct: 141 LSAVTANPLADGHPLSDTTTLTPGAPARSSAATTASTMASN 19
>gb|AY239038.1| Hordeum vulgare subsp. vulgare clone CEa0006o08 glucan
endo-1,3-beta-D-glucosidase mRNA, complete cds
Length = 1287
Score = 175 bits (377), Expect(3) = 3e-048
Identities = 72/109 (66%), Positives = 85/109 (77%)
Frame = +2 / +2
Query: 341 QPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNA 520
Q V D+GNGL Y NLFDAMVDA+ A+EKA AP+V +VVSE GWPSAG A++ NA
Sbjct: 728 QSPNPVHDDGNGLTYTNLFDAMVDALYTAMEKADAPDVPIVVSESGWPSAGDDLATLTNA 907
Query: 521 RKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYG 667
+ YNQ LIDHVG+GTPKR PLET++FAMFNEN+K G TE+NFGLF G
Sbjct: 908 QTYNQNLIDHVGKGTPKRPVPLETYIFAMFNENKKEGPDTERNFGLFNG 1054
Score = 31.8 bits (63), Expect(3) = 3e-048
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 250 RAXGXRXSPNVYPYFAYRDNP 312
+A G NVYPYFA RD P
Sbjct: 635 KATGAPLLANVYPYFAKRDTP 697
Score = 23.5 bits (45), Expect(3) = 3e-048
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 668 NKQPVYPIRF 697
+K PVYPIRF
Sbjct: 1058 DKTPVYPIRF 1087
>gb|AL500833.1|AL500833 AL500833 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02B04u 3', mRNA sequence
Length = 452
Score = 190 bits (410), Expect = 8e-048
Identities = 76/111 (68%), Positives = 85/111 (76%)
Frame = +2 / -2
Query: 365 NGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLI 544
N NGL Y NLFDAMVD++ AALEKAG P V+VV+SE GWPS GFGA+ NAR YNQGLI
Sbjct: 385 NDNGLTYTNLFDAMVDSIYAALEKAGTPGVKVVISESGWPSDQGFGATAQNARAYNQGLI 206
Query: 545 DHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
+HVG GTPK+ G LET++FAMFNEN K GD EKNFGLF N P Y I F
Sbjct: 205 NHVGNGTPKKAGALETYIFAMFNENLKDGDELEKNFGLFKPNMSPAYAITF 53
Score = 102 bits (218), Expect = 2e-021
Identities = 42/70 (60%), Positives = 48/70 (68%)
Frame = -1 / +3
Query: 654 PKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPAEGQP 475
PKFFS SP FSLNMAK VS+ P LGVP PTW ++PWLY RA +AP P ++G P
Sbjct: 96 PKFFSSSSPSLRFSLNMAKIYVSNAPAFLGVPLPTWLINPWLYARAFCAVAPNPWSDGHP 275
Query: 474 XSDTTTLTLG 445
SD TTLT G
Sbjct: 276 LSDMTTLTPG 305
>gb|AY239039.1| Hordeum vulgare subsp. vulgare clone SMEm0025e22 glucan
endo-1,3-beta-D-glucosidase mRNA, partial cds
Length = 1074
Score = 173 bits (373), Expect(3) = 2e-047
Identities = 72/109 (66%), Positives = 84/109 (77%)
Frame = +2 / +2
Query: 341 QPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNA 520
Q V D+GNGL Y NLFDAMVDA+ A+EKA A +V +VVSE GWPSAG A++ NA
Sbjct: 566 QSPNPVHDDGNGLTYTNLFDAMVDALYTAMEKADASDVPIVVSESGWPSAGDDLATLTNA 745
Query: 521 RKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYG 667
+ YNQ LIDHVG+GTPKR PLET++FAMFNENQK G TE+NFGLF G
Sbjct: 746 QTYNQNLIDHVGKGTPKRPVPLETYIFAMFNENQKEGPDTERNFGLFNG 892
Score = 96.4 bits (204), Expect(3) = 1e-021
Identities = 41/69 (59%), Positives = 46/69 (66%)
Frame = -1 / -1
Query: 666 P*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPA 487
P PKF SV P FWFSLNMAK VS+G LLGVP PTWS+ WLY AL +A PA
Sbjct: 891 PLNSPKFLSVSGPSFWFSLNMAKMYVSNGTGLLGVPFPTWSIRFWLYVCALVRVARSSPA 712
Query: 486 EGQPXSDTT 460
+G P S+TT
Sbjct: 711 DGHPLSETT 685
Score = 30.4 bits (60), Expect(3) = 2e-047
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1 / +2
Query: 250 RAXGXRXSPNVYPYFAYRDNP 312
++ G NVYPYFA RD P
Sbjct: 473 KSTGAPLLANVYPYFAKRDTP 535
Score = 25.4 bits (49), Expect(3) = 1e-021
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3 / -1
Query: 286 GTRLAXXGXPVPAK*RATSRMYPSRRTP 203
G LA G PV + TS +Y S +TP
Sbjct: 510 GYTLARSGAPVDLRSWVTSVIYASLKTP 427
Score = 23.5 bits (45), Expect(3) = 2e-047
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 668 NKQPVYPIRF 697
+K PVYPIRF
Sbjct: 896 DKTPVYPIRF 925
Score = 23.5 bits (45), Expect(3) = 1e-021
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 313 AGCPGTRSKGTR 278
+GCP RS+GTR
Sbjct: 536 SGCPFWRSRGTR 501
>gb|BJ454422.1|BJ454422 BJ454422 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak24f23 5', mRNA sequence
Length = 669
Score = 173 bits (373), Expect(3) = 2e-047
Identities = 72/109 (66%), Positives = 84/109 (77%)
Frame = +2 / +3
Query: 341 QPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNA 520
Q V D+GNGL Y NLFDAMVDA+ A+EKA A +V +VVSE GWPSAG A++ NA
Sbjct: 153 QSPNPVHDDGNGLTYTNLFDAMVDALYTAMEKADASDVPIVVSESGWPSAGDDLATLTNA 332
Query: 521 RKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYG 667
+ YNQ LIDHVG+GTPKR PLET++FAMFNENQK G TE+NFGLF G
Sbjct: 333 QTYNQNLIDHVGKGTPKRPVPLETYIFAMFNENQKEGPDTERNFGLFNG 479
Score = 30.4 bits (60), Expect(3) = 2e-047
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 250 RAXGXRXSPNVYPYFAYRDNP 312
++ G NVYPYFA RD P
Sbjct: 60 KSTGAPLLANVYPYFAKRDTP 122
Score = 23.5 bits (45), Expect(3) = 2e-047
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 668 NKQPVYPIRF 697
+K PVYPIRF
Sbjct: 483 DKTPVYPIRF 512
>gb|BJ450923.1|BJ450923 BJ450923 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31p24 5', mRNA sequence
Length = 614
Score = 173 bits (373), Expect(3) = 2e-047
Identities = 72/109 (66%), Positives = 84/109 (77%)
Frame = +2 / +1
Query: 341 QPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNA 520
Q V D+GNGL Y NLFDAMVDA+ A+EKA A +V +VVSE GWPSAG A++ NA
Sbjct: 163 QSPNPVHDDGNGLTYTNLFDAMVDALYTAMEKADASDVPIVVSESGWPSAGDDLATLTNA 342
Query: 521 RKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYG 667
+ YNQ LIDHVG+GTPKR PLET++FAMFNENQK G TE+NFGLF G
Sbjct: 343 QTYNQNLIDHVGKGTPKRPVPLETYIFAMFNENQKEGPDTERNFGLFNG 489
Score = 96.4 bits (204), Expect(3) = 4e-022
Identities = 41/69 (59%), Positives = 46/69 (66%)
Frame = -1 / -1
Query: 666 P*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTLAPKPPA 487
P PKF SV P FWFSLNMAK VS+G LLGVP PTWS+ WLY AL +A PA
Sbjct: 488 PLNSPKFLSVSGPSFWFSLNMAKMYVSNGTGLLGVPFPTWSIRFWLYVCALVRVARSSPA 309
Query: 486 EGQPXSDTT 460
+G P S+TT
Sbjct: 308 DGHPLSETT 282
Score = 30.4 bits (60), Expect(3) = 2e-047
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1 / +1
Query: 250 RAXGXRXSPNVYPYFAYRDNP 312
++ G NVYPYFA RD P
Sbjct: 70 KSTGAPLLANVYPYFAKRDTP 132
Score = 25.4 bits (49), Expect(3) = 4e-022
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3 / -1
Query: 286 GTRLAXXGXPVPAK*RATSRMYPSRRTP 203
G LA G PV + TS +Y S +TP
Sbjct: 107 GYTLARSGAPVDLRSWVTSVIYASLKTP 24
Score = 23.5 bits (45), Expect(3) = 2e-047
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 668 NKQPVYPIRF 697
+K PVYPIRF
Sbjct: 493 DKTPVYPIRF 522
Score = 23.5 bits (45), Expect(3) = 4e-022
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 313 AGCPGTRSKGTR 278
+GCP RS+GTR
Sbjct: 133 SGCPFWRSRGTR 98
>gb|AV909148.1|AV909148 AV909148 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11m15 5', mRNA sequence
Length = 538
Score = 175 bits (376), Expect(2) = 9e-047
Identities = 68/94 (72%), Positives = 78/94 (82%)
Frame = +2 / +2
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDN 517
F PGTTV D+GNGL Y NLFDAMVD++ AALE A P V++VVSE GWPSA GFGA+ N
Sbjct: 257 FAPGTTVNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPSASGFGATAQN 436
Query: 518 ARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNEN 619
A+ YNQGLI+HVG GTPKR GPLET++FAMFNEN
Sbjct: 437 AQAYNQGLINHVGNGTPKRPGPLETYIFAMFNEN 538
Score = 32.2 bits (64), Expect(2) = 9e-047
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1 / +2
Query: 253 AXGXRXSPNVYPYFAYRDNPRDI 321
+ G NVYPYFAY+ +P++I
Sbjct: 170 STGAPLLANVYPYFAYKGDPQNI 238
>gb|BI957130.1|BI957130 HVSMEn0007K04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007K04f, mRNA sequence
Length = 560
Score = 184 bits (397), Expect = 5e-046
Identities = 74/112 (66%), Positives = 85/112 (75%)
Frame = +2 / +2
Query: 362 DNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGL 541
DNGNGL Y +LFDAMVD++ +ALE AG PNVRVVVSE GWPSAGGFGASV+NAR YNQGL
Sbjct: 2 DNGNGLTYTSLFDAMVDSIYSALENAGTPNVRVVVSESGWPSAGGFGASVENARNYNQGL 181
Query: 542 IDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
IDH+ G PKR +ET++F MF EN+K D E+NFGL QPVY F
Sbjct: 182 IDHIRSGAPKRPLAIETYIFTMFTENRKPRDEVERNFGLLCPKLQPVYTTTF 337
Score = 103 bits (220), Expect(2) = 2e-024
Identities = 46/80 (57%), Positives = 49/80 (61%)
Frame = -1 / -3
Query: 684 YTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRALSTL 505
YTGC L K PKF S S F FS+NM VS G P WS+SPWL FRA ST
Sbjct: 324 YTGCSLGHKSPKFLSTSSRGFLFSVNMVNMYVSIANGRFGAPLRMWSISPWL*FRAFSTD 145
Query: 504 APKPPAEGQPXSDTTTLTLG 445
AP PPA+G P SDTTTLT G
Sbjct: 144 APNPPADGHPLSDTTTLTFG 85
Score = 29.0 bits (57), Expect(2) = 2e-024
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3 / -2
Query: 466 HDDPDVGRAGLLERGDD 416
H PDV RAG+L+RG D
Sbjct: 106 HHHPDVRRAGVLQRGVD 56
>gb|BJ462228.1|BJ462228 BJ462228 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak24f23 3', mRNA sequence
Length = 604
Score = 173 bits (372), Expect(2) = 1e-043
Identities = 71/104 (68%), Positives = 83/104 (79%)
Frame = +2 / -1
Query: 356 VRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQ 535
V D+GNGL Y NLFDAMVDA+ A+EKA A +V +VVSE GWPSAG A++ NA+ YNQ
Sbjct: 604 VHDDGNGLTYTNLFDAMVDALYTAMEKADASDVPIVVSESGWPSAGDDLATLTNAQTYNQ 425
Query: 536 GLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYG 667
LIDHVG+GTPKR PLET++FAMFNENQK G TE+NFGLF G
Sbjct: 424 NLIDHVGKGTPKRPVPLETYIFAMFNENQKEGPDTERNFGLFNG 293
Score = 23.5 bits (45), Expect(2) = 1e-043
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / -1
Query: 668 NKQPVYPIRF 697
+K PVYPIRF
Sbjct: 289 DKTPVYPIRF 260
>gb|AL509694.1|AL509694 AL509694 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02J11u 3',
mRNA sequence
Length = 498
Score = 166 bits (357), Expect(2) = 8e-042
Identities = 64/90 (71%), Positives = 73/90 (81%)
Frame = +2 / -2
Query: 434 KAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTGPLETFVFAMFN 613
+ G P VRVVVSE GWPSAGGF A+ +NAR YNQG+IDHV RGTP R GP+E +VFAMFN
Sbjct: 476 RQGRPGVRVVVSETGWPSAGGFAATPENARAYNQGMIDHVARGTPNRPGPIEAYVFAMFN 297
Query: 614 ENQKGGDPTEKNFGLFYGNKQPVYPIRFN* 703
EN K GD TE+NFGLFY NK PVYP++F *
Sbjct: 296 ENMKPGDETERNFGLFYPNKSPVYPMKFK* 207
Score = 127 bits (272), Expect = 8e-029
Identities = 57/85 (67%), Positives = 61/85 (71%)
Frame = -1 / +1
Query: 699 LNRIGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFR 520
LN +G TG LL *K PKF SV SP F FSLNMA T S GP LLGVPR TWS+ PWLY R
Sbjct: 211 LNFMG*TGDLLG*KSPKFLSVSSPGFMFSLNMANT*ASMGPGLLGVPRATWSIMPWLYAR 390
Query: 519 ALSTLAPKPPAEGQPXSDTTTLTLG 445
A S +A PPA+G P SDTTTLT G
Sbjct: 391 AFSGVAANPPADGHPVSDTTTLTPG 465
Score = 24.4 bits (47), Expect(2) = 8e-042
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / -1
Query: 413 AVVAALEKAGAP 448
A+ AALEKAGAP
Sbjct: 498 AMYAALEKAGAP 463
>gb|BJ456617.1|BJ456617 BJ456617 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak22k17 3', mRNA sequence
Length = 710
Score = 88.6 bits (187), Expect(4) = 2e-040
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = +2 / -2
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFDA+VD +ALE AGA +V VVVSE GWPS GG A+ DNA+ YNQ LI H+ G
Sbjct: 535 YQNLFDAIVDTFYSALESAGAGSVGVVVSESGWPSEGGTAATTDNAQTYNQNLIKHIHVG 356
Score = 82.6 bits (174), Expect(4) = 2e-040
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +2 / -2
Query: 548 HVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFGLFYGNKQPVYPIRF 697
HVG+GTPKR G +E +VFAMFNEN+KG EK+FGLF +K P YPI F
Sbjct: 364 HVGQGTPKRPGAIEAYVFAMFNENRKGPAEIEKHFGLFNPDKSPAYPISF 215
Score = 27.6 bits (54), Expect(4) = 2e-040
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3 / -2
Query: 222 YMRDVARYLAGTGXPXXAKRVP 287
YM +A+YLA TG P A P
Sbjct: 694 YMAPIAQYLATTGAPLLANVYP 629
Score = 23.5 bits (45), Expect(4) = 2e-040
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1 / -2
Query: 277 NVYPYFAY 300
NVYPYF+Y
Sbjct: 640 NVYPYFSY 617
>emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC 3.2.1.73)
Length = 6260
Score = 127 bits (273), Expect(4) = 2e-036
Identities = 52/81 (64%), Positives = 61/81 (75%)
Frame = +2 / +3
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFD VDA A+ K G NV++VVSE GWPSAGG A+ NAR YNQ LI+HVGRG
Sbjct: 5157 YQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRG 5336
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP+ G +ET+VF+MFNENQK
Sbjct: 5337 TPRHPGAIETYVFSMFNENQK 5399
Score = 34.5 bits (69), Expect(4) = 2e-036
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
E+N+GLFY N Q VYPI F
Sbjct: 5412 EQNWGLFYPNMQHVYPISF 5468
Score = 24.0 bits (46), Expect(4) = 2e-036
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1 / +3
Query: 259 GXRXSPNVYPYFAYRDNP 312
G N+YPY A+ NP
Sbjct: 5034 GAPLMANIYPYLAWAYNP 5087
Score = 22.1 bits (42), Expect(4) = 2e-036
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / +1
Query: 295 AYRDNPRDISWVRHVPAG 348
A R +PR W R P G
Sbjct: 5104 ATRSSPRPAPWSRTAPTG 5157
>gb|AV926710.1|AV926710 AV926710 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23h17 5', mRNA sequence
Length = 690
Score = 127 bits (273), Expect(4) = 2e-036
Identities = 52/81 (64%), Positives = 61/81 (75%)
Frame = +2 / +2
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFD VDA A+ K G NV++VVSE GWPSAGG A+ NAR YNQ LI+HVGRG
Sbjct: 293 YQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRG 472
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP+ G +ET+VF+MFNENQK
Sbjct: 473 TPRHPGAIETYVFSMFNENQK 535
Score = 34.5 bits (69), Expect(4) = 2e-036
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2 / +2
Query: 641 EKNFGLFYGNKQPVYPIRF 697
E+N+GLFY N Q VYPI F
Sbjct: 548 EQNWGLFYPNMQHVYPISF 604
Score = 24.0 bits (46), Expect(4) = 2e-036
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1 / +2
Query: 259 GXRXSPNVYPYFAYRDNP 312
G N+YPY A+ NP
Sbjct: 170 GAPLMANIYPYLAWAYNP 223
Score = 22.1 bits (42), Expect(4) = 2e-036
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / +3
Query: 295 AYRDNPRDISWVRHVPAG 348
A R +PR W R P G
Sbjct: 240 ATRSSPRPAPWSRTAPTG 293
>gb|AV925542.1|AV925542 AV925542 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd24m02 5', mRNA sequence
Length = 643
Score = 127 bits (273), Expect(4) = 2e-036
Identities = 52/81 (64%), Positives = 61/81 (75%)
Frame = +2 / +1
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFD VDA A+ K G NV++VVSE GWPSAGG A+ NAR YNQ LI+HVGRG
Sbjct: 202 YQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRG 381
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP+ G +ET+VF+MFNENQK
Sbjct: 382 TPRHPGAIETYVFSMFNENQK 444
Score = 34.5 bits (69), Expect(4) = 2e-036
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2 / +1
Query: 641 EKNFGLFYGNKQPVYPIRF 697
E+N+GLFY N Q VYPI F
Sbjct: 457 EQNWGLFYPNMQHVYPISF 513
Score = 24.0 bits (46), Expect(4) = 2e-036
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1 / +1
Query: 259 GXRXSPNVYPYFAYRDNP 312
G N+YPY A+ NP
Sbjct: 79 GAPLMANIYPYLAWAYNP 132
Score = 22.1 bits (42), Expect(4) = 2e-036
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / +2
Query: 295 AYRDNPRDISWVRHVPAG 348
A R +PR W R P G
Sbjct: 149 ATRSSPRPAPWSRTAPTG 202
>gb|CA018533.1|CA018533 HV08O12r HV Hordeum vulgare subsp. vulgare cDNA clone HV08O12
5-PRIME, mRNA sequence
Length = 645
Score = 127 bits (273), Expect(4) = 2e-036
Identities = 52/81 (64%), Positives = 61/81 (75%)
Frame = +2 / +2
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFD VDA A+ K G NV++VVSE GWPSAGG A+ NAR YNQ LI+HVGRG
Sbjct: 320 YQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRG 499
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP+ G +ET+VF+MFNENQK
Sbjct: 500 TPRHPGAIETYVFSMFNENQK 562
Score = 34.5 bits (69), Expect(4) = 2e-036
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2 / +2
Query: 641 EKNFGLFYGNKQPVYPIRF 697
E+N+GLFY N Q VYPI F
Sbjct: 575 EQNWGLFYPNMQHVYPISF 631
Score = 24.0 bits (46), Expect(4) = 2e-036
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1 / +2
Query: 259 GXRXSPNVYPYFAYRDNP 312
G N+YPY A+ NP
Sbjct: 197 GAPLMANIYPYLAWAYNP 250
Score = 22.1 bits (42), Expect(4) = 2e-036
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / +3
Query: 295 AYRDNPRDISWVRHVPAG 348
A R +PR W R P G
Sbjct: 267 ATRSSPRPAPWSRTAPTG 320
>gb|BQ465340.1|BQ465340 HU03F15r HU Hordeum vulgare subsp. vulgare cDNA clone HU03F15
5-PRIME, mRNA sequence
Length = 626
Score = 127 bits (273), Expect(4) = 2e-036
Identities = 52/81 (64%), Positives = 61/81 (75%)
Frame = +2 / +3
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFD VDA A+ K G NV++VVSE GWPSAGG A+ NAR YNQ LI+HVGRG
Sbjct: 237 YQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRG 416
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP+ G +ET+VF+MFNENQK
Sbjct: 417 TPRHPGAIETYVFSMFNENQK 479
Score = 34.5 bits (69), Expect(4) = 2e-036
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
E+N+GLFY N Q VYPI F
Sbjct: 492 EQNWGLFYPNMQHVYPISF 548
Score = 24.0 bits (46), Expect(4) = 2e-036
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1 / +3
Query: 259 GXRXSPNVYPYFAYRDNP 312
G N+YPY A+ NP
Sbjct: 114 GAPLMANIYPYLAWAYNP 167
Score = 22.1 bits (42), Expect(4) = 2e-036
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1 / +1
Query: 295 AYRDNPRDISWVRHVPAG 348
A R +PR W R P G
Sbjct: 184 ATRSSPRPAPWSRTAPTG 237
>gb|BF256955.3|BF256955 HVSMEf0011H13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0011H13f, mRNA sequence
Length = 535
Score = 129 bits (277), Expect(2) = 8e-036
Identities = 54/78 (69%), Positives = 60/78 (76%)
Frame = +2 / +2
Query: 476 GWPSAGGFGASVDNARKYNQGLIDHVGRGTPKRTGPLETFVFAMFNENQKGGDPTEKNFG 655
G SA GF A+ DNAR YNQGLIDHVG GTPKR G LET++FAMFNEN K G+ TEK+FG
Sbjct: 53 GGASASGFAATADNARAYNQGLIDHVGGGTPKRPGALETYIFAMFNENFKTGELTEKHFG 232
Query: 656 LFYGNKQPVYPIRFN*LR 709
LF +K P YPIRF * R
Sbjct: 233 LFNPDKSPAYPIRFQ*RR 286
Score = 98.7 bits (209), Expect(3) = 2e-021
Identities = 44/74 (59%), Positives = 49/74 (66%)
Frame = -1 / -2
Query: 696 NRIGYTGCLLP*KRPKFFSVGSPPFWFSLNMAKTKVSSGPVLLGVPRPTWSMSPWLYFRA 517
NR+GY G L PK FSV SP FSLNMAK VS+ P LLGVP PTWS+SPWLY A
Sbjct: 273 NRMGYAGDLSGLNSPKCFSVSSPVLKFSLNMAKMYVSNAPGLLGVPPPTWSISPWLYALA 94
Query: 516 LSTLAPKPPAEGQP 475
LS +A P A+ P
Sbjct: 93 LSAVAANPLADAPP 52
Score = 40.9 bits (83), Expect(2) = 8e-036
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2 / +1
Query: 425 ALEKAGAPNVRVVVSEXGW 481
ALE+AGAP VRVVVSE GW
Sbjct: 1 ALERAGAPGVRVVVSESGW 57
Score = 22.6 bits (43), Expect(3) = 2e-021
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 477 PXSDTTTLTLG 445
P SDTTTLT G
Sbjct: 53 PLSDTTTLTPG 21
Score = 21.7 bits (41), Expect(3) = 2e-021
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1 / -3
Query: 846 IEYVHTS*LHRSSTSPAGHMHAAAYSCSI 760
++YVH S L R +H +SC I
Sbjct: 422 LQYVHASYLGRYIDVYVYSIHVTLHSCII 336
>gb|BJ453971.1|BJ453971 BJ453971 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45f07 5', mRNA sequence
Length = 499
Score = 138 bits (296), Expect(2) = 8e-036
Identities = 54/77 (70%), Positives = 62/77 (80%)
Frame = +2 / +3
Query: 338 FQPGTTVRDNGNGLNYNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDN 517
F PGTTV D+GNGL Y NLFDAMVD++ AALE A P V++VVSE GWPSA GFGA+ N
Sbjct: 267 FAPGTTVNDDGNGLTYTNLFDAMVDSIYAALEDANKPGVKLVVSESGWPSASGFGATAQN 446
Query: 518 ARKYNQGLIDHVGRGTP 568
A+ YNQGLI+HVG GTP
Sbjct: 447 AQAYNQGLINHVGNGTP 497
Score = 32.2 bits (64), Expect(2) = 8e-036
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1 / +3
Query: 253 AXGXRXSPNVYPYFAYRDNPRDI 321
+ G NVYPYFAY+ +P++I
Sbjct: 180 STGAPLLANVYPYFAYKGDPQNI 248
>emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D-glucanase
Length = 4849
Score = 127 bits (273), Expect(3) = 4e-035
Identities = 52/81 (64%), Positives = 61/81 (75%)
Frame = +2 / +1
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFD VDA A+ K G NV++VVSE GWPSAGG A+ NAR YNQ LI+HVGRG
Sbjct: 4150 YQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRG 4329
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP+ G +ET+VF+MFNENQK
Sbjct: 4330 TPRHPGAIETYVFSMFNENQK 4392
Score = 34.5 bits (69), Expect(3) = 4e-035
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2 / +1
Query: 641 EKNFGLFYGNKQPVYPIRF 697
E+N+GLFY N Q VYPI F
Sbjct: 4405 EQNWGLFYPNMQHVYPISF 4461
Score = 24.0 bits (46), Expect(3) = 4e-035
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1 / +1
Query: 259 GXRXSPNVYPYFAYRDNP 312
G N+YPY A+ NP
Sbjct: 4027 GAPLMANIYPYLAWAYNP 4080
>emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucanase.(EC number 3.2.1.73)
Length = 4643
Score = 127 bits (273), Expect(3) = 4e-035
Identities = 52/81 (64%), Positives = 61/81 (75%)
Frame = +2 / +3
Query: 383 YNNLFDAMVDAVVAALEKAGAPNVRVVVSEXGWPSAGGFGASVDNARKYNQGLIDHVGRG 562
Y NLFD VDA A+ K G NV++VVSE GWPSAGG A+ NAR YNQ LI+HVGRG
Sbjct: 3750 YQNLFDTTVDAFYTAMAKHGGSNVKLVVSESGWPSAGGTAATPANARIYNQYLINHVGRG 3929
Query: 563 TPKRTGPLETFVFAMFNENQK 625
TP+ G +ET+VF+MFNENQK
Sbjct: 3930 TPRHPGAIETYVFSMFNENQK 3992
Score = 34.5 bits (69), Expect(3) = 4e-035
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2 / +3
Query: 641 EKNFGLFYGNKQPVYPIRF 697
E+N+GLFY N Q VYPI F
Sbjct: 4005 EQNWGLFYPNMQHVYPISF 4061
Score = 24.0 bits (46), Expect(3) = 4e-035
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1 / +3
Query: 259 GXRXSPNVYPYFAYRDNP 312
G N+YPY A+ NP
Sbjct: 3627 GAPLMANIYPYLAWAYNP 3680
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 323,533,597
Number of Sequences: 312970
Number of extensions: 4683287
Number of successful extensions: 49954
Number of sequences better than 1.0e-020: 139
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 10273312316
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)