TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161272.2.15
(797 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgar... 149 3e-064
gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedl... 108 5e-057
gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedl... 141 6e-056
gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachi... 147 3e-055
gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgar... 141 1e-054
gb|AV917139.1|AV917139 AV917139 K. Sato unpublished cDNA li... 113 1e-052
gb|CB881182.1|CB881182 HM09A07w HM Hordeum vulgare subsp. v... 205 3e-052
gb|BQ468475.1|BQ468475 HM01F21T HM Hordeum vulgare subsp. v... 204 7e-052
gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgar... 141 2e-051
gb|CB881625.1|CB881625 HM10G06w HM Hordeum vulgare subsp. v... 117 3e-051
gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachi... 147 5e-051
gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedl... 143 9e-051
gb|BM442635.2|BM442635 EBan01_SQ003_L19_R anther, yellow st... 199 2e-050
gb|CB883976.1|CB883976 HM06N05r HM Hordeum vulgare subsp. v... 198 3e-050
gb|BE060246.3|BE060246 HVSMEg0011L08f Hordeum vulgare pre-a... 101 6e-050
gb|BI950777.1|BI950777 HVSMEl0023C15f Hordeum vulgare spike... 108 2e-049
gb|BQ759881.1|BQ759881 EBpi05_SQ004_P16_R pistil, 8 DPA, no... 136 4e-049
gb|BQ753409.1|BQ753409 EBan01_SQ004_D03_R anther, yellow st... 191 4e-048
gb|BQ465138.1|BQ465138 HU02M06r HU Hordeum vulgare subsp. v... 141 6e-048
gb|CB880524.1|CB880524 HM06N05w HM Hordeum vulgare subsp. v... 117 7e-048
gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 ... 147 1e-046
gb|BJ463021.1|BJ463021 BJ463021 K. Sato unpublished cDNA li... 92 2e-044
gb|BF260026.3|BF260026 HVSMEf0020O13f Hordeum vulgare seedl... 136 2e-044
gb|BQ661443.1|BQ661443 HM03I08u HM Hordeum vulgare subsp. v... 117 4e-044
gb|BM097618.2|BM097618 EBem04_SQ002_D15_R embryo, 12 DPA, n... 114 3e-043
gb|BQ469137.1|BQ469137 HM03I08r HM Hordeum vulgare subsp. v... 173 1e-042
gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachi... 147 1e-042
gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachi... 147 5e-042
gb|CV058074.1|CV058074 BNEL34a7 Barley EST endosperm librar... 92 2e-041
gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm libra... 110 3e-041
gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachi... 147 3e-041
gb|BE454367.2|BE454367 HVSMEh0093N18f Hordeum vulgare 5-45 ... 107 9e-041
gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachi... 147 1e-040
gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. v... 141 1e-040
gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm librar... 110 2e-040
gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. v... 147 2e-040
gb|BU995044.1|BU995044 HM09A07r HM Hordeum vulgare subsp. v... 140 3e-040
gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachi... 147 6e-040
gb|BE230894.2|BE230894 HVSMEg0001I02f Hordeum vulgare pre-a... 163 9e-040
gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachi... 147 1e-038
gb|BM442090.2|BM442090 EBan01_SQ002_C16_R anther, yellow st... 159 2e-038
gb|BF256653.2|BF256653 HVSMEf0010J19f Hordeum vulgare seedl... 141 2e-038
gb|BI960089.1|BI960089 HVSMEn0023C15f Hordeum vulgare rachi... 149 2e-038
gb|BF253787.2|BF253787 HVSMEf0002C01f Hordeum vulgare seedl... 104 4e-038
gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DA... 147 9e-038
gb|AV928430.1|AV928430 AV928430 K. Sato unpublished cDNA li... 136 2e-037
gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgar... 141 2e-037
gb|CV055940.1|CV055940 BNEL12B5 Barley EST endosperm librar... 96 8e-037
gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm librar... 110 1e-036
gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. v... 110 1e-036
gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. v... 110 1e-036
gb|BU967134.1|BU967134 HB03G05r BC Hordeum vulgare subsp. v... 110 1e-036
gb|BQ459628.1|BQ459628 HA08J01r HA Hordeum vulgare subsp. v... 90 2e-036
gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, dro... 141 1e-035
gb|BM372935.2|BM372935 EBma04_SQ002_H04_R maternal, 10 DPA,... 149 2e-035
gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachi... 147 6e-035
gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DA... 147 6e-035
gb|CA022206.1|CA022206 HZ42H09r HZ Hordeum vulgare subsp. v... 147 6e-035
gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library... 110 9e-035
gb|BF257093.3|BF257093 HVSMEf0011N11f Hordeum vulgare seedl... 65 1e-034
gb|CA019924.1|CA019924 HV13L18r HV Hordeum vulgare subsp. v... 65 1e-034
gb|BI956858.1|BI956858 HVSMEn0005K24f Hordeum vulgare rachi... 123 1e-034
gb|BG310251.1|BG310251 HVSMEc0016K12f Hordeum vulgare seedl... 146 2e-034
gb|BI957183.1|BI957183 HVSMEn0007P24f Hordeum vulgare rachi... 138 2e-034
gb|BI957582.1|BI957582 HVSMEn0010D14f Hordeum vulgare rachi... 144 6e-034
gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachi... 144 6e-034
gb|CB882163.1|CB882163 HL01B01w HL Hordeum vulgare subsp. v... 144 6e-034
gb|CV060955.1|CV060955 BNEL63c5 Barley EST endosperm librar... 59 9e-034
gb|BU980984.1|BU980984 HA22E18r HA Hordeum vulgare subsp. v... 82 1e-033
gb|BM098205.2|BM098205 EBpi03_SQ002_N14_R pistil, 4 DPA, no... 82 1e-033
gb|AV923254.1|AV923254 AV923254 K. Sato unpublished cDNA li... 143 1e-033
gb|CA022237.1|CA022237 HZ42I19r HZ Hordeum vulgare subsp. v... 143 1e-033
gb|CA023986.1|CA023986 HZ48A15r HZ Hordeum vulgare subsp. v... 143 1e-033
gb|CB884030.1|CB884030 HM10H05r HM Hordeum vulgare subsp. v... 142 2e-033
gb|CB884057.1|CB884057 HM12C11r HM Hordeum vulgare subsp. v... 142 2e-033
gb|BI959378.1|BI959378 HVSMEn0019H04f Hordeum vulgare rachi... 142 3e-033
gb|BU980194.1|BU980194 HA18P06r HA Hordeum vulgare subsp. v... 141 4e-033
gb|CA031744.1|CA031744 HX11A03r HX Hordeum vulgare subsp. v... 141 4e-033
gb|CK124612.1|CK124612 BES1824109m10 BES1824 Hordeum vulgar... 139 2e-032
gb|BF259343.2|BF259343 HVSMEf0019F11f Hordeum vulgare seedl... 138 3e-032
gb|BQ753555.1|BQ753555 EBan01_SQ004_J12_R anther, yellow st... 137 9e-032
gb|BQ459308.1|BQ459308 HA01I15r HA Hordeum vulgare subsp. v... 87 2e-031
gb|AL507275.1|AL507275 AL507275 Hordeum vulgare Barke devel... 110 3e-031
gb|BU993991.1|BU993991 HM05E17r HM Hordeum vulgare subsp. v... 135 3e-031
gb|BF618493.2|BF618493 HVSMEc0005N13f Hordeum vulgare seedl... 129 4e-031
gb|CW512145.1|CW512145 ToNAR_Morex_118b Morex Exon trapped ... 126 5e-031
gb|BF625170.3|BF625170 HVSMEa0006D08f Hordeum vulgare seedl... 121 1e-030
gb|BU978694.1|BU978694 HA14A06r HA Hordeum vulgare subsp. v... 133 2e-030
gb|BQ758707.1|BQ758707 EBma07_SQ002_G16_R maternal, 21 DPA,... 131 4e-030
gb|BQ764421.1|BQ764421 EBan01_SQ005_G21_R anther, yellow st... 131 4e-030
gb|AL504600.1|AL504600 AL504600 Hordeum vulgare Barke roots... 93 2e-029
gb|BQ467895.1|BQ467895 HR01E04r HR Hordeum vulgare subsp. v... 128 3e-029
gb|CB880652.1|CB880652 HM07E17w HM Hordeum vulgare subsp. v... 127 5e-029
gb|CB881234.1|CB881234 HM09C23w HM Hordeum vulgare subsp. v... 127 5e-029
gb|BG368109.2|BG368109 HVSMEi0015L12f Hordeum vulgare 20 DA... 57 8e-029
gb|CB883447.1|CB883447 HQ02E17w HQ Hordeum vulgare subsp. v... 114 9e-029
gb|CV063456.1|CV063456 BNEL8E2 Barley EST endosperm library... 110 2e-028
gb|CV061225.1|CV061225 BNEL66d10 Barley EST endosperm libra... 110 2e-028
gb|CV054400.1|CV054400 BNEL10B12 Barley EST endosperm libra... 110 2e-028
gb|BI949344.1|BI949344 HVSMEl0013G22f Hordeum vulgare spike... 110 2e-028
gb|AV917082.1|AV917082 AV917082 K. Sato unpublished cDNA li... 100 2e-028
gb|BQ764067.1|BQ764067 EBro03_SQ006_N05_R root, 3 week, wat... 108 4e-028
gb|BG368652.1|BG368652 HVSMEi0020B24f Hordeum vulgare 20 DA... 55 1e-027
gb|BU981754.1|BU981754 HA24I17r HA Hordeum vulgare subsp. v... 106 2e-027
gb|BQ470849.1|BQ470849 HX04D14r HX Hordeum vulgare subsp. v... 100 3e-027
gb|CK124171.1|CK124171 BES1824107e17 BES1824 Hordeum vulgar... 90 3e-027
gb|BG369116.2|BG369116 HVSMEi0021M10f Hordeum vulgare 20 DA... 68 4e-027
gb|BE603113.3|BE603113 HVSMEh0101P24f Hordeum vulgare 5-45 ... 118 4e-026
gb|BG368126.2|BG368126 HVSMEi0015M21f Hordeum vulgare 20 DA... 57 6e-025
gb|CA017263.1|CA017263 HV14A15u HV Hordeum vulgare subsp. v... 87 3e-024
gb|BM101447.2|BM101447 EBpi01_SQ003_O01_R pistil, 1 DPA, no... 87 3e-024
gb|BI960393.1|BI960393 HVSMEn0024H07f Hordeum vulgare rachi... 111 4e-024
gb|BQ760850.1|BQ760850 EBro03_SQ003_K11_R root, 3 week, wat... 111 7e-024
gb|BJ453165.1|BJ453165 BJ453165 K. Sato unpublished cDNA li... 110 9e-024
gb|BJ460714.1|BJ460714 BJ460714 K. Sato unpublished cDNA li... 110 9e-024
gb|BI959328.1|BI959328 HVSMEn0019E09f Hordeum vulgare rachi... 82 9e-024
gb|BI959812.1|BI959812 HVSMEn0021L03f Hordeum vulgare rachi... 110 1e-023
gb|BU986289.1|BU986289 HF11E17r HF Hordeum vulgare subsp. v... 110 1e-023
gb|BU983094.1|BU983094 HA28I14r HA Hordeum vulgare subsp. v... 82 3e-023
gb|BU981183.1|BU981183 HA22N23r HA Hordeum vulgare subsp. v... 92 5e-023
gb|BQ765573.1|BQ765573 EBro03_SQ007_F17_R root, 3 week, wat... 55 1e-021
>gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P122 5-PRIME, mRNA sequence
Length = 717
Score = 149 bits (320), Expect(3) = 3e-064
Identities = 54/77 (70%), Positives = 64/77 (83%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCY++RC++ CSG TV ITDMNY P+APYHFDLSG AFG LAKPGLND+LR
Sbjct: 46 GKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAPYHFDLSGTAFGRLAKPGLNDRLR 225
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D+EF RV C++P
Sbjct: 226 HSGIIDIEFTRVPCEFP 276
Score = 116 bits (247), Expect(3) = 7e-047
Identities = 52/77 (67%), Positives = 57/77 (74%)
Frame = -3 / -2
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H T +NS SMMP+WRSLSLSPGFA P A+PL+SKW*GA G *FMSVM TV+ LPE
Sbjct: 275 GNSHGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMITVSVLPEQ 96
Query: 51 SGFSLHLTS*HEPQPLP 1
LHL *HEP PLP
Sbjct: 95 DWSFLHLIL*HEPHPLP 45
Score = 95.0 bits (201), Expect(3) = 3e-028
Identities = 48/75 (64%), Positives = 54/75 (72%)
Frame = -2 / -1
Query: 226 LAPHPSELDVHDAAVAKLVVEPGLCQGAEGLAAQVEVVGSDRLVVHVCDEHRDRIARALR 47
LA HP ELDV DA VA+ VVEPGLC+ AE AA+VEVVG R+VVHV D+HR R A A
Sbjct: 270 LARHPCELDVDDAGVAEPVVEPGLCEPAERCAAEVEVVGRHRVVVHVGDDHRLRPAGAGL 91
Query: 46 FFLASHLVA*ATALA 2
AS LVA*A +LA
Sbjct: 90 VLPASDLVA*AASLA 46
Score = 91.8 bits (194), Expect(3) = 5e-029
Identities = 43/77 (55%), Positives = 51/77 (66%)
Frame = +1 / +3
Query: 1 RQGLWLMLRGEMQGKT*VLGQSCHGVHHRHELRAYRSLPLRLERQGLRLPGKARAQRQAS 180
RQG+ LML+ +MQ +L Q G HHRHEL +LPLR +R +R KARAQRQA
Sbjct: 45 RQGMRLMLQDQMQEGPILLRQDGDGDHHRHELLPGGALPLRPQRHSVRQARKARAQRQAP 224
Query: 181 PLRHHGRRVQKGAVQVP 231
PLRHH RV GAV+VP
Sbjct: 225 PLRHHRHRVHTGAVRVP 275
Score = 90.4 bits (191), Expect(3) = 3e-064
Identities = 33/69 (47%), Positives = 48/69 (69%)
Frame = +2 / +1
Query: 329 LMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIPANWRPD 508
LME + +W M+ SWG++WR+D+ L+ PFSIR+ +ESGK ++A +IPANWRP+
Sbjct: 379 LMESRGPGGGKWTRMRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPN 558
Query: 509 AVYTSNVQF 535
Y S VQ+
Sbjct: 559 TFYRSFVQY 585
Score = 70.3 bits (147), Expect(3) = 7e-047
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = -2 / -1
Query: 532 LDVGSVDGIGSPVRRDDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLPLS 356
L G+V+G+G PV RDD+ D+ LAGL +AD E LE + V PDGAPR H PLS
Sbjct: 582 LHEGAVEGVGPPVGRDDLVGDERLAGLVADADGEWRLEAVVGVEAPDGAPRLPHPRPLS 406
Score = 44.6 bits (91), Expect(3) = 3e-064
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G KI FH+E+ NP Y AVLV++ DGD+V +++ +
Sbjct: 277 GLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLME 387
Score = 42.8 bits (87), Expect(3) = 5e-029
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +1 / +3
Query: 361 VEAHEALLGRHLEDGHCQGAQGPLLYPPHQRVRQEGHR*RHHPGELETRCRLHFQRPILL 540
V+ E ++G L G +L+P QRVRQ+ R + HPG+LE + L R + L
Sbjct: 411 VDEDEGVVGLRLAPRLQPPPPGAILHPHPQRVRQDARRQQGHPGQLEAQHLLPLLRAVQL 590
Query: 541 DFELPS 558
PS
Sbjct: 591 KSLYPS 608
Score = 41.4 bits (84), Expect(3) = 3e-028
Identities = 24/56 (42%), Positives = 28/56 (50%)
Frame = -3 / -2
Query: 528 TLEV*TASGLQFAGMMSLAMTFLPDSLVRRIEKGPLSALAVSILQMAPQESFMGFH 361
T E * GLQ AGM LA + LPDSL R+E G S Q P +S + H
Sbjct: 578 TKER*KVLGLQLAGMTLLATSVLPDSLRMRMENGAWRRWLESRRQTEPHDSLILVH 411
Score = 39.6 bits (80), Expect(3) = 7e-047
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -2 / -1
Query: 340 DFHQHDVAIVRHKLHQHGQVVGVAALLDVEHDLLP 236
+ H H VA+ LHQH +V GV LL VE DL P
Sbjct: 381 EVHLHHVAVAVLVLHQHREVDGVRVLLHVEPDLEP 277
Score = 30.9 bits (61), Expect(3) = 5e-029
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1 / +3
Query: 238 AEDRVPHREGLQPQLPGRAGEVCGGRWRHRADGNPG 345
A+DRVP L+P+L AG V G R R A G G
Sbjct: 279 AQDRVPRGGVLEPRLLRGAGGVRGRRRRRGAGGPHG 386
Score = 26.7 bits (52), Expect(3) = 3e-028
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3 / -2
Query: 297 TSTAR*LGLQPFSMWNTIFCP 235
TSTA+* G + S WN I P
Sbjct: 338 TSTAK*TGFEYSSTWNPILSP 276
>gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002I16f, mRNA sequence
Length = 851
Score = 108 bits (231), Expect(4) = 5e-057
Identities = 40/62 (64%), Positives = 51/62 (82%)
Frame = +2 / +2
Query: 47 PECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCK 226
P CSG P TV ITDMNY P++ +HFDLSG AFG++AK G N++LRH GI+D++FRRV C+
Sbjct: 233 PACSGVPETVIITDMNYYPVSRFHFDLSGTAFGAMAKDGRNEELRHAGIIDMQFRRVPCQ 412
Query: 227 YP 232
YP
Sbjct: 413 YP 418
Score = 91.8 bits (194), Expect(4) = 5e-057
Identities = 30/60 (50%), Positives = 46/60 (76%)
Frame = +2 / +2
Query: 353 SAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQ 532
+ EW PM SWG+IWRMDT + ++GPFS+R+T+ESGK ++A + P +W P+ +Y+S +Q
Sbjct: 572 TGEWVPMTESWGSIWRMDTRRPMQGPFSLRITNESGKTLVADQVNPGDWEPNEIYSSFIQ 751
Score = 86.8 bits (183), Expect(3) = 1e-038
Identities = 39/63 (61%), Positives = 44/63 (69%)
Frame = -3 / -3
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
GY H TLLN SMMP RS SL P A PKA+PL+SKW G *FMSVM TV+G PEH
Sbjct: 417 GYWHGTLLNCMSMMPACRSSSLRPSLAMAPKAVPLRSKWKRDTG**FMSVMITVSGTPEH 238
Query: 51 SGF 43
+G+
Sbjct: 237 AGW 229
Score = 79.0 bits (166), Expect(3) = 1e-038
Identities = 35/61 (57%), Positives = 41/61 (67%)
Frame = -2 / -2
Query: 541 LVELDVGSVDGIGSPVRRDDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLP 362
LV+LD G+VD +G PV D+ D+ LAGL G+A REGAL VHPPDGAP HG P
Sbjct: 760 LVDLDEGAVDFVGLPVAGIDLVGDERLAGLVGDAQREGALHGAPCVHPPDGAPGLGHGHP 581
Query: 361 L 359
L
Sbjct: 580 L 578
Score = 69.3 bits (145), Expect(3) = 5e-026
Identities = 36/61 (59%), Positives = 40/61 (65%)
Frame = -2 / -2
Query: 229 VLAPHPSELDVHDAAVAKLVVEPGLCQGAEGLAAQVEVVGSDRLVVHVCDEHRDRIARAL 50
VLA HPSEL V DA V +L V L GAEG AA+VEV R+VVHV D+HR R A A
Sbjct: 415 VLARHPSELHVDDAGVPELFVAAVLGHGAEGGAAEVEVEAGHRVVVHVRDDHRLRHAGAR 236
Query: 49 R 47
R
Sbjct: 235 R 233
Score = 62.5 bits (130), Expect(3) = 5e-026
Identities = 30/58 (51%), Positives = 35/58 (60%)
Frame = -3 / -3
Query: 531 WTLEV*TASGLQFAGMMSLAMTFLPDSLVRRIEKGPLSALAVSILQMAPQESFMGFHS 358
W E+* + G Q G+ A + LPDSLV R EKGP VSI QM PQ+S MG HS
Sbjct: 750 WMKEL*ISLGSQSPGLTWSATSVLPDSLVMRSEKGPCMGRRVSIRQMEPQDSVMGTHS 577
Score = 42.3 bits (86), Expect(4) = 5e-057
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDI 325
G + FH++ G NP YLA+LV++ DGD+
Sbjct: 419 GLTVTFHVQHGSNPYYLAILVEYENGDGDV 508
Score = 35.4 bits (71), Expect(4) = 5e-057
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2 / +2
Query: 2 GKGCGSCYEVRC 37
GKGCGSCY++RC
Sbjct: 182 GKGCGSCYQIRC 217
Score = 32.7 bits (65), Expect(3) = 1e-038
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -2 / -2
Query: 334 HQHDVAIVRHKLHQHGQVVGVAALLDVEHDLLP 236
H VA+ LHQ GQVVGV +L VE P
Sbjct: 517 HLVHVAVAVLVLHQDGQVVGVGTVLHVERHRQP 419
Score = 23.5 bits (45), Expect(3) = 5e-026
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3 / -3
Query: 297 TSTAR*LGLQPFSMWNTIFCP 235
T AR* GL+P WN P
Sbjct: 480 TRMAR**GLEPCCTWNVTVSP 418
>gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0003B13f, mRNA sequence
Length = 789
Score = 141 bits (303), Expect(3) = 6e-056
Identities = 50/77 (64%), Positives = 62/77 (80%)
Frame = +2 / +2
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCG+CY+++C + CSG TV ITDMNY P+APYHFDLSG AFG LAKPG ND+LR
Sbjct: 107 GKGCGACYKIKCTKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELR 286
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F RV C++P
Sbjct: 287 HAGIIDIQFTRVACEFP 337
Score = 100 bits (212), Expect(2) = 3e-025
Identities = 47/77 (61%), Positives = 54/77 (70%)
Frame = -3 / -1
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H TL+N SMMP RS SL PG A PKA+PL+SKW*GA G *FMSV+ TV+ PEH
Sbjct: 336 GNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEH 157
Query: 51 SGFSLHLTS*HEPQPLP 1
+ +HL *H PQPLP
Sbjct: 156 ALCFVHLIL*HAPQPLP 106
Score = 69.8 bits (146), Expect(3) = 6e-056
Identities = 25/55 (45%), Positives = 39/55 (70%)
Frame = +2 / +2
Query: 362 WKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIPANWRPDAVYTSN 526
W M+ SWG IWR+D+ L+ PFSIR+ +ESG+ ++A+ +IP RP+ +Y S+
Sbjct: 479 WTRMRESWGFIWRLDSNHRLQAPFSIRIRNESGQTLVAR*VIPKKGRPNTLYCSS 643
Score = 45.1 bits (92), Expect(3) = 6e-056
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G K+ FH+E+G N Y+A+LV++ DGD+V +++ +
Sbjct: 338 GLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLME 448
Score = 37.3 bits (75), Expect(2) = 3e-025
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -2 / -3
Query: 520 SVDGIGSPVRRDDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLP 362
+V +G P+ DD+ L GL +AD E L + V PD +PR H P
Sbjct: 637 TV*SVGPPLLGDDLAGYKRLPGLVADADGEWRL*TMVGVEAPDESPRLAHPRP 479
>gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005E06f, mRNA sequence
Length = 796
Score = 147 bits (316), Expect(2) = 3e-055
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCY++RC CSGNP TV ITDMNY P+A YHFDLSG AFG++AKPGL++KLR
Sbjct: 211 GKGCGSCYQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLR 390
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F+RV C++P
Sbjct: 391 HSGIIDIQFKRVPCEFP 441
Score = 95.5 bits (202), Expect(2) = 1e-026
Identities = 45/77 (58%), Positives = 50/77 (64%)
Frame = -3 / -3
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H TLLN SMMP+ RS SL PG A P A+PL+SKW A G *FMSVM TV+GLPE
Sbjct: 440 GNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQ 261
Query: 51 SGFSLHLTS*HEPQPLP 1
+H * EP PLP
Sbjct: 260 DWSLVHRIW*QEPHPLP 210
Score = 88.1 bits (186), Expect(2) = 3e-055
Identities = 32/78 (41%), Positives = 51/78 (65%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAK 415
G K+ FH+E+G NP Y AVLV++ DGD+V +++ + S W PM+ SWG+I R+D+
Sbjct: 442 GLKVTFHVEQGSNPVYFAVLVEYXDGDGDMVQVDLMEANSCTWTPMRESWGSILRLDSGH 621
Query: 416 ALKGPFSIRLTSESGKKV 469
+ P S L +E G+++
Sbjct: 622 GWRPPLSFALXNEGGREL 675
Score = 44.6 bits (91), Expect(2) = 1e-026
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = -2 / -2
Query: 406 VHPPDGAPRELHGLPLSRQLVLDFHQHDVAIVRHKLHQHGQVVGVAALLDVEHDL 242
V P D +PR H P + + + H H VA+ LHQHG+V V LL VE L
Sbjct: 612 VQPQD*SPRLAHRRPRTGVGLHEVHLHHVAVAVXVLHQHGEVHRVRPLLHVEGHL 448
>gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010F166 5-PRIME, mRNA sequence
Length = 750
Score = 141 bits (303), Expect(3) = 1e-054
Identities = 50/77 (64%), Positives = 62/77 (80%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCG+CY+++C + CSG TV ITDMNY P+APYHFDLSG AFG LAKPG ND+LR
Sbjct: 163 GKGCGACYKIKCTKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELR 342
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F RV C++P
Sbjct: 343 HAGIIDIQFTRVACEFP 393
Score = 100 bits (212), Expect(2) = 6e-028
Identities = 47/77 (61%), Positives = 54/77 (70%)
Frame = -3 / -2
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H TL+N SMMP RS SL PG A PKA+PL+SKW*GA G *FMSV+ TV+ PEH
Sbjct: 392 GNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEH 213
Query: 51 SGFSLHLTS*HEPQPLP 1
+ +HL *H PQPLP
Sbjct: 212 ALCFVHLIL*HAPQPLP 162
Score = 65.2 bits (136), Expect(3) = 1e-054
Identities = 22/43 (51%), Positives = 34/43 (79%)
Frame = +2 / +1
Query: 362 WKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIP 490
W M+ SWG+IWR+D+ L+ PFSIR+ +ESGK ++A+++IP
Sbjct: 535 WTRMRESWGSIWRLDSNHRLQAPFSIRIRNESGKTLVARNVIP 663
Score = 46.4 bits (95), Expect(2) = 6e-028
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = -2 / -1
Query: 487 DDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLP 362
DDV D+ L GL +AD E LE + V PDG+PR H P
Sbjct: 660 DDVAGDERLXGLVADADGEWRLETMVGVEAPDGSPRLAHPRP 535
Score = 45.1 bits (92), Expect(3) = 1e-054
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G K+ FH+E+G N Y+A+LV++ DGD+V +++ +
Sbjct: 394 GLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLME 504
>gb|AV917139.1|AV917139 AV917139 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20o17 5', mRNA sequence
Length = 590
Score = 113 bits (242), Expect(3) = 1e-052
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +2 / +1
Query: 53 CSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYP 232
CSG TV ITDMNY P+APYHFDLSG AFG LAKPG ND+LRH GI+D++F RV C++P
Sbjct: 19 CSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFP 198
Score = 86.8 bits (183), Expect(3) = 1e-052
Identities = 30/58 (51%), Positives = 44/58 (75%)
Frame = +2 / +1
Query: 362 WKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
W M+ SWG+IWR+D+ L+ PFSIR+ +ESGK ++A+++IP NWRP+ Y S VQ+
Sbjct: 340 WTRMRESWGSIWRLDSNHRLQAPFSIRIRNESGKTLVARNVIPKNWRPNTFYRSIVQY 513
Score = 81.7 bits (172), Expect(2) = 5e-029
Identities = 38/61 (62%), Positives = 44/61 (72%)
Frame = -3 / -1
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H TL+N SMMP RS SL PG A PKA+PL+SKW*GA G *FMSV+ TV+ PEH
Sbjct: 197 GNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEH 18
Query: 51 S 49
+
Sbjct: 17 A 15
Score = 68.0 bits (142), Expect(2) = 5e-029
Identities = 30/60 (50%), Positives = 37/60 (61%)
Frame = -2 / -3
Query: 541 LVELDVGSVDGIGSPVRRDDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLP 362
L LD G+V+G+G PV DDV D+ LAGL +AD E LE + V PDG+PR H P
Sbjct: 519 LAVLDDGAVEGVGPPVLGDDVAGDERLAGLVADADGEWRLETMVGVEAPDGSPRLAHPRP 340
Score = 45.1 bits (92), Expect(3) = 1e-052
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G K+ FH+E+G N Y+A+LV++ DGD+V +++ +
Sbjct: 199 GLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLME 309
>gb|CB881182.1|CB881182 HM09A07w HM Hordeum vulgare subsp. vulgare cDNA clone HM09A07
3-PRIME, mRNA sequence
Length = 680
Score = 205 bits (442), Expect = 3e-052
Identities = 76/138 (55%), Positives = 103/138 (74%)
Frame = +2 / -3
Query: 104 IAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNY 283
IA YHFDLSG AFG++AK G KLR G ++++FRRV+CKYP G K+ FH+EKG +PNY
Sbjct: 678 IAAYHFDLSGHAFGTMAKKGQEQKLRDAGEVEIKFRRVKCKYPEGTKVNFHVEKGSSPNY 499
Query: 284 LAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGK 463
LA++VKF+ DGD+V ++I+ K +W +K SWGA+WR+DT L GPFS+R T+E G
Sbjct: 498 LALVVKFLQGDGDVVAVDIKPKGKDKWIELKESWGAVWRIDTPDKLIGPFSVRYTTEGGT 319
Query: 464 KVIAKDIIPANWRPDAVY 517
K +A+D+IP W+PD Y
Sbjct: 318 KTVAEDVIPEGWKPDTSY 265
Score = 124 bits (266), Expect = 5e-028
Identities = 68/141 (48%), Positives = 82/141 (58%)
Frame = -2 / +1
Query: 526 VGSVDGIGSPVRRDDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLPLSRQL 347
+G V G+G P DDV D L A L G AD E A E + V PP+G+PR L PL L
Sbjct: 256 LGLVGGVGLPALGDDVLGDGLGAALGGVADGEWADELVRCVDPPNGSPRLLELDPLVLAL 435
Query: 346 VLDFHQHDVAIVRHKLHQHGQVVGVAALLDVEHDLLPSGVLAPHPSELDVHDAAVAKLVV 167
LD H H VA+ +L G+VVG ALL VE L VLA +ELD+H A VA+L++
Sbjct: 436 GLDVHGHHVAVALEELDNQGEVVGAGALLHVEVHLGALRVLALDAAELDLHLAGVAQLLL 615
Query: 166 EPGLCQGAEGLAAQVEVVGSD 104
L GAEG+A QVEVV D
Sbjct: 616 LALLGHGAEGMAGQVEVVRRD 678
Score = 113 bits (242), Expect = 1e-024
Identities = 58/135 (42%), Positives = 69/135 (51%)
Frame = -3 / +2
Query: 507 SGLQFAGMMSLAMTFLPDSLVRRIEKGPLSALAVSILQMAPQESFMGFHSADNLXXXXXX 328
SG Q +GM S A +P S+V R E GP+S VSILQ AP +S H + L
Sbjct: 275 SGFQPSGMTSSATVLVPPSVV*RTENGPMSLSGVSILQTAPHDSLSSIHLSLPLGLMSTA 454
Query: 327 XXXXXSATNFTSTAR*LGLQPFSMWNTIFCPAGYLHRTLLNSTSMMPQWRSLSLSPGFAR 148
N T+ AR*LGL+PFS W P+GYLH T N S P RS P A
Sbjct: 455 TTSPSPWRNLTTRAR*LGLEPFSTWKFTLVPSGYLHLTRRNLISTSPASRSFCSWPFLAM 634
Query: 147 EPKALPLKSKW*GAI 103
PKA P +SKW A+
Sbjct: 635 VPKAWPDRSKWYAAM 679
>gb|BQ468475.1|BQ468475 HM01F21T HM Hordeum vulgare subsp. vulgare cDNA clone HM01F21
5-PRIME, mRNA sequence
Length = 650
Score = 204 bits (439), Expect = 7e-052
Identities = 78/113 (69%), Positives = 90/113 (79%)
Frame = +2 / +2
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCYEV+C + P CS P+TVFITD NYEPIAPYH DLSGKAFG++A G LR
Sbjct: 311 GKGCGSCYEVKCNKPPPCSDKPITVFITDKNYEPIAPYHIDLSGKAFGAMATAGNEQTLR 490
Query: 182 HCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEI 340
G ++++FRRVRCKY G K+ FH+E G NPNYLA+LVKFVADDGDIV MEI
Sbjct: 491 SFGELELQFRRVRCKYAPGTKVTFHVETGSNPNYLAILVKFVADDGDIVQMEI 649
Score = 133 bits (285), Expect = 1e-030
Identities = 60/103 (58%), Positives = 66/103 (64%)
Frame = -3 / -3
Query: 309 ATNFTSTAR*LGLQPFSMWNTIFCPAGYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALP 130
ATN TS AR* G +P S W P YL RTLLN +S P RS+ P A PKALP
Sbjct: 618 ATNLTSMAR*FGFEPVSTWKVTLVPGAYLQRTLLNCSSSSPNERSVCSFPAVAMAPKALP 439
Query: 129 LKSKW*GAIGS*FMSVMNTVTGLPEHSGFSLHLTS*HEPQPLP 1
+S W GA+GS*F+SVM TV GL EH G LHLTS* EP PLP
Sbjct: 438 DRSMWYGAMGS*FLSVMKTVMGLSEHGGGLLHLTS*QEPHPLP 310
Score = 112 bits (240), Expect = 2e-024
Identities = 52/113 (46%), Positives = 72/113 (63%)
Frame = +1 / +1
Query: 1 RQGLWLMLRGEMQGKT*VLGQSCHGVHHRHELRAYRSLPLRLERQGLRLPGKARAQRQAS 180
RQG+ L+LRG++Q VL Q+ H +HHR ELRA+R++P RQGLR G R + A
Sbjct: 310 RQGMRLLLRGQVQQAAAVLRQAHHRLHHRQELRAHRAVPH*PVRQGLRRHGDGRERADAP 489
Query: 181 PLRHHGRRVQKGAVQVPRWAEDRVPHREGLQPQLPGRAGEVCGGRWRHRADGN 339
+R VQ+GA+QV W + +P R+ L+P+LPG +V R RHRADG+
Sbjct: 490 LIRGARAAVQEGALQVRAWHQGHLPRRDRLEPKLPGHTRQVRRRRRRHRADGD 648
>gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010J225 5-PRIME, mRNA sequence
Length = 776
Score = 141 bits (303), Expect(3) = 2e-051
Identities = 50/77 (64%), Positives = 62/77 (80%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCG+CY+++C + CSG TV ITDMNY P+APYHFDLSG AFG LAKPG ND+LR
Sbjct: 280 GKGCGACYKIKCTKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELR 459
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F RV C++P
Sbjct: 460 HAGIIDIQFTRVACEFP 510
Score = 100 bits (212), Expect(2) = 5e-027
Identities = 47/77 (61%), Positives = 54/77 (70%)
Frame = -3 / -1
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H TL+N SMMP RS SL PG A PKA+PL+SKW*GA G *FMSV+ TV+ PEH
Sbjct: 509 GNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEH 330
Query: 51 SGFSLHLTS*HEPQPLP 1
+ +HL *H PQPLP
Sbjct: 329 ALCFVHLIL*HAPQPLP 279
Score = 54.7 bits (113), Expect(3) = 2e-051
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = +2 / +3
Query: 353 SAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDI 484
+ W M SWG+IW +D+ L+ P SIR+ +ESGKK+ A+++
Sbjct: 645 AGRWTRMPESWGSIWGLDSXNRLQXPXSIRIRNESGKKLXARNV 776
Score = 45.1 bits (92), Expect(3) = 2e-051
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G K+ FH+E+G N Y+A+LV++ DGD+V +++ +
Sbjct: 511 GLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLME 621
Score = 43.2 bits (88), Expect(2) = 5e-027
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = -2 / -1
Query: 484 DVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLPLSRQ 350
DV +LL GL +AD LE + V PDG+PR H P +R+
Sbjct: 776 DVAGXELLXGLVADADGXWXLETIXGVEAPDGSPRLGHXXPPARR 642
>gb|CB881625.1|CB881625 HM10G06w HM Hordeum vulgare subsp. vulgare cDNA clone HM10G06
3-PRIME, mRNA sequence
Length = 588
Score = 117 bits (251), Expect(2) = 3e-051
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +2 / -1
Query: 359 EWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
+W PM LSWGAIWR D A A+K PFSIRLTSESGKK+IA+D+IPANW+PD VY SN+QF
Sbjct: 381 KWIPMTLSWGAIWRWDGANAIKAPFSIRLTSESGKKLIAQDVIPANWKPDTVYQSNIQF 205
Score = 104 bits (221), Expect(2) = 3e-051
Identities = 41/63 (65%), Positives = 49/63 (77%)
Frame = +2 / -1
Query: 161 GLNDKLRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEI 340
G LR G ++++FRRVRCKY G K+ FH+E G NPNYLA+LVKFVADDGDIV MEI
Sbjct: 582 GNEQTLRSFGELELQFRRVRCKYAPGTKVTFHVETGSNPNYLAILVKFVADDGDIVQMEI 403
Query: 341 QDK 349
Q+K
Sbjct: 402 QEK 394
Score = 93.6 bits (198), Expect(2) = 9e-032
Identities = 39/60 (65%), Positives = 47/60 (78%)
Frame = -2 / +1
Query: 538 VELDVGSVDGIGSPVRRDDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLPL 359
+ELD+ VDG+G PV DDV D+LLAGLAGEAD EG L+R+G+V PPDGAPR+ H PL
Sbjct: 202 LELDI*LVDGVGLPVGGDDVLGDELLAGLAGEADGEGGLDRIGAVPPPDGAPRQGHRDPL 381
Score = 84.5 bits (178), Expect(2) = 3e-027
Identities = 38/59 (64%), Positives = 43/59 (72%)
Frame = -3 / +2
Query: 537 *NWTLEV*TASGLQFAGMMSLAMTFLPDSLVRRIEKGPLSALAVSILQMAPQESFMGFH 361
*NW + *T SG Q AGM S AM+FLPDSLVRR+EKG L ALA S LQMAP + +G H
Sbjct: 203 *NWIFDW*TVSGFQLAGMTSWAMSFLPDSLVRRMEKGALIALAPSHLQMAPHDKVIGIH 379
Score = 80.3 bits (169), Expect(2) = 3e-027
Identities = 34/61 (55%), Positives = 42/61 (68%)
Frame = +1 / -3
Query: 361 VEAHEALLGRHLEDGHCQGAQGPLLYPPHQRVRQEGHR*RHHPGELETRCRLHFQRPILL 540
V+ + ++GRHLE G Q QGPLL+PPHQRVRQE HR HP +LE R RL + P+L
Sbjct: 379 VDPDDLVVGRHLEVGRRQCDQGPLLHPPHQRVRQEAHRPGRHPRQLEARHRLPVKYPVLE 200
Query: 541 D 543
D
Sbjct: 199 D 197
Score = 63.4 bits (132), Expect(2) = 9e-032
Identities = 31/66 (46%), Positives = 42/66 (63%)
Frame = -2 / +1
Query: 355 RQLVLDFHQHDVAIVRHKLHQHGQVVGVAALLDVEHDLLPSGVLAPHPSELDVHDAAVAK 176
R+ +L+ H HDVA+V +L ++GQVV V A LDVE DL VLA HP EL + A+
Sbjct: 388 RRFLLNLHLHDVAVVGDELDEYGQVVWVRAGLDVEGDLGARRVLAAHPPELQLELPE*AE 567
Query: 175 LVVEPG 158
++ PG
Sbjct: 568 RLLVPG 585
Score = 61.6 bits (128), Expect(2) = 3e-027
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = +1 / -3
Query: 160 RAQRQASPLRHHGRRVQKGAVQVPRWAEDRVPHREGLQPQLPGRAGEVCGGRWRHRADGN 339
R + A +R VQ+GA+QV W + +P R+ L+P+LPG +V R RHRADG+
Sbjct: 583 RERADAPLIRGARAAVQEGALQVRAWHQGHLPRRDRLEPKLPGHTRQVRRRRRRHRADGD 404
Query: 340 PGQV 351
G++
Sbjct: 403 SGEI 392
Score = 57.4 bits (119), Expect(2) = 3e-027
Identities = 25/50 (50%), Positives = 28/50 (56%)
Frame = -3 / +2
Query: 309 ATNFTSTAR*LGLQPFSMWNTIFCPAGYLHRTLLNSTSMMPQWRSLSLSP 160
ATN TS AR* G +P S W P YL RTLLN +S P RS+ P
Sbjct: 434 ATNLTSMAR*FGFEPVSTWKVTLVPGAYLQRTLLNCSSSSPNERSVCSFP 583
>gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0018F10f, mRNA sequence
Length = 669
Score = 147 bits (316), Expect(3) = 5e-051
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCY++RC CSGNP TV ITDMNY P+A YHFDLSG AFG++AKPGL++KLR
Sbjct: 228 GKGCGSCYQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLR 407
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F+RV C++P
Sbjct: 408 HSGIIDIQFKRVPCEFP 458
Score = 95.5 bits (202), Expect(3) = 2e-027
Identities = 45/77 (58%), Positives = 50/77 (64%)
Frame = -3 / -3
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H TLLN SMMP+ RS SL PG A P A+PL+SKW A G *FMSVM TV+GLPE
Sbjct: 457 GNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQ 278
Query: 51 SGFSLHLTS*HEPQPLP 1
+H * EP PLP
Sbjct: 277 DWSLVHRIW*QEPHPLP 227
Score = 53.8 bits (111), Expect(3) = 5e-051
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEW 364
G K+ FH+E+G NP Y AVLV++ DGD+V +++ + S W
Sbjct: 459 GLKVTFHVEQGSNPVYFAVLVEYEDGDGDLVQVDLMEANSGTW 587
Score = 38.6 bits (78), Expect(3) = 5e-051
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2 / +1
Query: 368 PMKLSWGAIWRMDTAKALKGPFSI 439
PM+ SWG+IWR+++ L+ PFS+
Sbjct: 592 PMRESWGSIWRVESGHRLQAPFSM 663
Score = 35.9 bits (72), Expect(3) = 2e-027
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2 / -2
Query: 370 GLPLSRQLVLDFHQHDVAIVRHKLHQHGQVVGVAALLDVEHDL 242
G+P + + + H H VA+ LHQHG+V V LL VE L
Sbjct: 593 GVPRTGVGLHEVHLHQVAVAVLVLHQHGEVHRVRPLLHVEGHL 465
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2 / -1
Query: 433 EGALERLGSVHPPDGAPRELHGLPLSR 353
E LE + HPPD +PR H P R
Sbjct: 657 ERRLEAVAGFHPPD*SPRFAHRRPTYR 577
>gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009C23f, mRNA sequence
Length = 762
Score = 143 bits (306), Expect(2) = 9e-051
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCY++RC CSGN TV ITDMNY P+A YHFDLSG AFG+LAK GLN+KLR
Sbjct: 333 GKGCGSCYQIRCSGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLR 512
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++FRRV C +P
Sbjct: 513 HSGIIDIQFRRVPCNFP 563
Score = 103 bits (220), Expect(2) = 2e-030
Identities = 48/77 (62%), Positives = 53/77 (68%)
Frame = -3 / -3
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G LH TLLN SMMP+WRS SL P AR PKA+PL+SKW A G *FMSV+ TV+ LPE
Sbjct: 562 GKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITVSMLPEQ 383
Query: 51 SGFSLHLTS*HEPQPLP 1
LH * EPQPLP
Sbjct: 382 ERSPLHRIW*QEPQPLP 332
Score = 92.3 bits (195), Expect(2) = 7e-024
Identities = 48/80 (60%), Positives = 56/80 (70%)
Frame = -2 / -2
Query: 241 LPSGVLAPHPSELDVHDAAVAKLVVEPGLCQGAEGLAAQVEVVGSDRLVVHVCDEHRDRI 62
L +G +A HP ELDV DA VA+L+VE L QGAEG AAQV+VV DR+VVHV D HR +
Sbjct: 572 LEAGEVARHPPELDVDDARVAELLVEARLGQGAEGRAAQVKVVLGDRVVVHVGDHHRLDV 393
Query: 61 ARALRFFLASHLVA*ATALA 2
A A AS+LVA A ALA
Sbjct: 392 AGAGAVAAASYLVAGAAALA 333
Score = 84.5 bits (178), Expect(2) = 1e-022
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = +1 / +2
Query: 1 RQGLWLMLRGEMQGKT*VLGQSCHGVHHRHELRAYRSLPLRLERQGLRLPGKARAQRQAS 180
RQGL L+L MQ + +L Q G HRHEL R +PL ER GLR PG+ QR+A
Sbjct: 332 RQGLRLLLPDTMQRRPLLLRQHRDGDDHRHELLPGRPVPL*PERHGLRRPGQVGPQREAP 511
Query: 181 PLRHHGRRVQKGAVQVPR 234
PL HH VQ+GAVQ+PR
Sbjct: 512 PLGHHRHPVQEGAVQLPR 565
Score = 77.6 bits (163), Expect(2) = 9e-051
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAK 415
G KI FH+ +G N YLAVL+++ DGD++ ++++ S W M+ SWG+IWRMD+
Sbjct: 564 GLKINFHVVEGSNAVYLAVLIEYEDMDGDVIQVDMKGANSGSWMAMRESWGSIWRMDSNH 743
Query: 416 ALKGP 430
L+GP
Sbjct: 744 RLQGP 758
Score = 48.7 bits (100), Expect(2) = 2e-030
Identities = 28/61 (45%), Positives = 32/61 (52%)
Frame = -2 / -2
Query: 424 LERLGSVHPPDGAPRELHGLPLSRQLVLDFHQHDVAIVRHKLHQHGQVVGVAALLDVEHD 245
L+ + VHPPDG+PR H P R L H VA+ L QH QV V AL VE D
Sbjct: 752 LKPVVGVHPPDGSPRLAHRHPRPRVGSLHVHLDHVAVHVLVLDQHRQVHRVGALHHVEVD 573
Query: 244 L 242
L
Sbjct: 572 L 570
Score = 41.8 bits (85), Expect(2) = 1e-022
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +1 / +2
Query: 241 EDRVPHREGLQPQLPGRAGEVCGGRWRHRADGNPGQVVG*VEAHEALLGRHLEDGHCQGA 420
+D++P GLQ +PG A V G R G+ G +G V+ ++G HL DG A
Sbjct: 569 QDQLPRGGGLQRGVPGGADRVRGHGRRRDPGGHEGSQLGVVDGDARVVGIHLADGLQPPA 748
Query: 421 QG 426
G
Sbjct: 749 SG 754
Score = 38.2 bits (77), Expect(2) = 7e-024
Identities = 19/52 (36%), Positives = 25/52 (48%)
Frame = -1 / -1
Query: 404 PSSRWRPKRASWASTQPTTCPGFPSARCRHRPPQTSPARPGSWGCSPSRCGT 249
PS+RW P + ST P+ P P R P+T A PG+ SP G+
Sbjct: 732 PSARWIPTTRASPSTTPSWLPSCPPGSRRRPCPRTRSAPPGTPRWSPPPRGS 577
>gb|BM442635.2|BM442635 EBan01_SQ003_L19_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_L19 5', mRNA sequence
Length = 411
Score = 199 bits (428), Expect = 2e-050
Identities = 74/136 (54%), Positives = 100/136 (73%)
Frame = +2 / +3
Query: 14 GSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGI 193
GSC+E++C + CSG P V ITD N EPIA YHFDLSG AFG++AK G KLR G
Sbjct: 3 GSCFELKCTKPEACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAKKGQEQKLRDAGE 182
Query: 194 MDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPM 373
++++FRRV+CKYP G K+ FH+EKG +PNYLA+++KF+ DGD+V ++I+ K +W +
Sbjct: 183 VEIKFRRVKCKYPEGTKVNFHVEKGSSPNYLALVIKFLQGDGDVVAVDIKPKGKDKWIEL 362
Query: 374 KLSWGAIWRMDTAKAL 421
K SWGA+WR+DT L
Sbjct: 363 KESWGAVWRIDTPDKL 410
Score = 113 bits (241), Expect = 1e-024
Identities = 58/136 (42%), Positives = 70/136 (51%)
Frame = -3 / -3
Query: 420 SALAVSILQMAPQESFMGFHSADNLXXXXXXXXXXXSATNFTSTAR*LGLQPFSMWNTIF 241
S VSILQ AP +S H + L N + AR*LGL+PFS W
Sbjct: 409 SLSGVSILQTAPHDSLSSIHLSLPLGLMSTATTSPSPWRNLITRAR*LGLEPFSTWKFTL 230
Query: 240 CPAGYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGL 61
P+GYLH T N S P RS P A PKA P +SKW A+GS F+SVM T+ G
Sbjct: 229 VPSGYLHLTRRNLISTSPASRSFCSWPFLAMVPKAWPDRSKWYAAMGSSFLSVMVTMVGS 50
Query: 60 PEHSGFSLHLTS*HEP 13
PE + +HL+S EP
Sbjct: 49 PEQASGLVHLSSKQEP 2
>gb|CB883976.1|CB883976 HM06N05r HM Hordeum vulgare subsp. vulgare cDNA clone HM06N05
5-PRIME, mRNA sequence
Length = 616
Score = 198 bits (427), Expect = 3e-050
Identities = 75/109 (68%), Positives = 87/109 (79%)
Frame = +2 / +2
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCYEV+C + P CS P+TVFITD NYEPIAPYH DLSGKAFG++A G LR
Sbjct: 290 GKGCGSCYEVKCNKPPPCSDKPITVFITDKNYEPIAPYHIDLSGKAFGAMATAGNEQTLR 469
Query: 182 HCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKFVADDGDIV 328
G ++++FRRVRCKY G K+ FH+E G NPNYLA+LVKFVADDGDIV
Sbjct: 470 SFGELELQFRRVRCKYAPGTKVTFHVETGSNPNYLAILVKFVADDGDIV 616
Score = 133 bits (285), Expect = 1e-030
Identities = 60/103 (58%), Positives = 66/103 (64%)
Frame = -3 / -2
Query: 309 ATNFTSTAR*LGLQPFSMWNTIFCPAGYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALP 130
ATN TS AR* G +P S W P YL RTLLN +S P RS+ P A PKALP
Sbjct: 597 ATNLTSMAR*FGFEPVSTWKVTLVPGAYLQRTLLNCSSSSPNERSVCSFPAVAMAPKALP 418
Query: 129 LKSKW*GAIGS*FMSVMNTVTGLPEHSGFSLHLTS*HEPQPLP 1
+S W GA+GS*F+SVM TV GL EH G LHLTS* EP PLP
Sbjct: 417 DRSMWYGAMGS*FLSVMKTVMGLSEHGGGLLHLTS*QEPHPLP 289
Score = 105 bits (223), Expect = 4e-022
Identities = 49/109 (44%), Positives = 68/109 (62%)
Frame = +1 / +1
Query: 1 RQGLWLMLRGEMQGKT*VLGQSCHGVHHRHELRAYRSLPLRLERQGLRLPGKARAQRQAS 180
RQG+ L+LRG++Q VL Q+ H +HHR ELRA+R++P RQGLR G R + A
Sbjct: 289 RQGMRLLLRGQVQQAAAVLRQAHHRLHHRQELRAHRAVPH*PVRQGLRRHGDGRERADAP 468
Query: 181 PLRHHGRRVQKGAVQVPRWAEDRVPHREGLQPQLPGRAGEVCGGRWRHR 327
+R VQ+GA+QV W + +P R+ L+P+LPG +V R RHR
Sbjct: 469 LIRGARAAVQEGALQVRAWHQGHLPRRDRLEPKLPGHTRQVRRRRRRHR 615
>gb|BE060246.3|BE060246 HVSMEg0011L08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011L08f, mRNA sequence
Length = 544
Score = 101 bits (215), Expect(3) = 6e-050
Identities = 37/49 (75%), Positives = 43/49 (87%)
Frame = +2 / +2
Query: 86 DMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYP 232
DMNY P+APYHFDLSG AFG LAKPGLND+LRH GI+D+EF RV C++P
Sbjct: 2 DMNYYPVAPYHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPCEFP 148
Score = 90.4 bits (191), Expect(3) = 6e-050
Identities = 33/69 (47%), Positives = 48/69 (69%)
Frame = +2 / +2
Query: 329 LMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIPANWRPD 508
LME + +W M+ SWG++WR+D+ L+ PFSIR+ +ESGK ++A +IPANWRP+
Sbjct: 251 LMESRGPGGGKWTRMRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPN 430
Query: 509 AVYTSNVQF 535
Y S VQ+
Sbjct: 431 TFYRSFVQY 457
Score = 81.7 bits (172), Expect(3) = 1e-036
Identities = 35/49 (71%), Positives = 39/49 (79%)
Frame = -3 / -2
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMS 85
G H T +NS SMMP+WRSLSLSPGFA P A+PL+SKW*GA G *FMS
Sbjct: 147 GNSHGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG**FMS 1
Score = 73.9 bits (155), Expect(3) = 4e-022
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = -2 / -1
Query: 226 LAPHPSELDVHDAAVAKLVVEPGLCQGAEGLAAQVEVVGSDRLVVHV 86
LA HP ELDV DA VA+ VVEPGLC+ AE AA+VEVVG R+VVHV
Sbjct: 142 LARHPCELDVDDAGVAEPVVEPGLCEPAERRAAEVEVVGRHRVVVHV 2
Score = 70.3 bits (147), Expect(3) = 1e-036
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = -2 / -1
Query: 532 LDVGSVDGIGSPVRRDDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLPLS 356
L G+V+G+G PV RDD+ D+ LAGL +AD E LE + V PDGAPR H PLS
Sbjct: 454 LHEGAVEGVGPPVGRDDLVGDERLAGLVADADGEWRLEAVVGVEAPDGAPRLPHPRPLS 278
Score = 69.8 bits (146), Expect(3) = 2e-022
Identities = 31/49 (63%), Positives = 35/49 (71%)
Frame = +1 / +1
Query: 85 RHELRAYRSLPLRLERQGLRLPGKARAQRQASPLRHHGRRVQKGAVQVP 231
RHEL +LPLR +R G+R KARAQRQA PLRHH RV GAV+VP
Sbjct: 1 RHELLPGGALPLRPQRHGVRQARKARAQRQAPPLRHHRHRVHTGAVRVP 147
Score = 44.6 bits (91), Expect(3) = 6e-050
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G KI FH+E+ NP Y AVLV++ DGD+V +++ +
Sbjct: 149 GLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLME 259
Score = 42.8 bits (87), Expect(3) = 2e-022
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +1 / +1
Query: 361 VEAHEALLGRHLEDGHCQGAQGPLLYPPHQRVRQEGHR*RHHPGELETRCRLHFQRPILL 540
V+ E ++G L G +L+P QRVRQ+ R + HPG+LE + L R + L
Sbjct: 283 VDEDEGVVGLRLAPRLQPPPPGAILHPHPQRVRQDARRQQGHPGQLEAQHLLPLLRAVQL 462
Query: 541 DFELPS 558
PS
Sbjct: 463 KSLYPS 480
Score = 41.4 bits (84), Expect(3) = 4e-022
Identities = 24/56 (42%), Positives = 28/56 (50%)
Frame = -3 / -2
Query: 528 TLEV*TASGLQFAGMMSLAMTFLPDSLVRRIEKGPLSALAVSILQMAPQESFMGFH 361
T E * GLQ AGM LA + LPDSL R+E G S Q P +S + H
Sbjct: 450 TKER*KVLGLQLAGMTLLATSVLPDSLRMRMENGAWRRWLESRRQTEPHDSLILVH 283
Score = 39.6 bits (80), Expect(3) = 1e-036
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -2 / -1
Query: 340 DFHQHDVAIVRHKLHQHGQVVGVAALLDVEHDLLP 236
+ H H VA+ LHQH +V GV LL VE DL P
Sbjct: 253 EVHLHHVAVAVLVLHQHREVDGVRVLLHVEPDLEP 149
Score = 30.9 bits (61), Expect(3) = 2e-022
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1 / +1
Query: 238 AEDRVPHREGLQPQLPGRAGEVCGGRWRHRADGNPG 345
A+DRVP L+P+L AG V G R R A G G
Sbjct: 151 AQDRVPRGGVLEPRLLRGAGGVRGRRRRRGAGGPHG 258
Score = 26.7 bits (52), Expect(3) = 4e-022
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3 / -2
Query: 297 TSTAR*LGLQPFSMWNTIFCP 235
TSTA+* G + S WN I P
Sbjct: 210 TSTAK*TGFEYSSTWNPILSP 148
>gb|BI950777.1|BI950777 HVSMEl0023C15f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0023C15f, mRNA sequence
Length = 986
Score = 108 bits (231), Expect(3) = 2e-049
Identities = 39/100 (39%), Positives = 62/100 (62%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAK 415
G I F +++G NP Y L++F DDGD+ + +++ S W M WGA+WR++
Sbjct: 285 GVNIAFKVDQGSNPFYFKTLIEFEDDDGDLKAVALKEAGSGAWTQMTQDWGALWRLNNGN 464
Query: 416 ALKGPFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
L+ PFS++LTS+SG+K++ ++I ANW A Y S V +
Sbjct: 465 RLRAPFSLQLTSDSGRKLVINNVILANWNAGATYRSLVNY 584
Score = 70.7 bits (148), Expect(3) = 5e-033
Identities = 37/91 (40%), Positives = 52/91 (57%)
Frame = -2 / -1
Query: 523 GSVDGIGSPVRRDDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLPLSRQLV 344
G+V G G PV DDV D+L AG+ GE +REG + + V P AP H P + +
Sbjct: 572 GAVRGSGIPVGEDDVVDDELPAGVGGELEREGGAQPVAVVEAPQRAPVLCHLRPGAAAGL 393
Query: 343 LDFHQHDVAIVRHKLHQHGQVVGVAALLDVE 251
L+ H +VA+V +L Q +V GV AL+ +E
Sbjct: 392 LEGHGLEVAVVVLELDQGLEVEGVGALVHLE 300
Score = 68.0 bits (142), Expect(3) = 2e-049
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +2 / +3
Query: 92 NYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYP 232
N P P HFD+SG A G++AKPG+ DKLR G++ ++++RV CKYP
Sbjct: 144 NLYPGEPCHFDMSGTALGAMAKPGMADKLRAGGVIRMQYKRVPCKYP 284
Score = 60.6 bits (126), Expect(3) = 5e-033
Identities = 27/44 (61%), Positives = 29/44 (65%)
Frame = -3 / -2
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIG 100
GYLH TLL M P RSLS PGFA PKA+PL SKW G+ G
Sbjct: 283 GYLHGTLLYCILMTPPARSLSAMPGFAMAPKAVPLMSKWHGSPG 152
Score = 57.9 bits (120), Expect(3) = 2e-049
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMN 94
GKGCG+CY+V+C CSG PVTV ITD++
Sbjct: 45 GKGCGACYDVKCSSNSACSGKPVTVVITDLS 137
Score = 47.8 bits (98), Expect(3) = 5e-033
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = -3 / -2
Query: 87 SVMNTVTGLPEHSGFSLHLTS*HEPQPLP 1
SVM TVTG PE + HLTS*H PQPLP
Sbjct: 130 SVMTTVTGFPEQAELLEHLTS*HAPQPLP 44
>gb|BQ759881.1|BQ759881 EBpi05_SQ004_P16_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_P16 5', mRNA sequence
Length = 500
Score = 136 bits (291), Expect(2) = 4e-049
Identities = 49/100 (49%), Positives = 71/100 (71%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAK 415
G K+ FH+E+G NP Y AVLV++ DGD+V +++ + S W PM+ SWG+IWR+D+
Sbjct: 122 GLKVTFHVEQGSNPVYFAVLVEYEDGDGDVVQVDLMEANSGTWTPMRESWGSIWRLDSGH 301
Query: 416 ALKGPFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
L+ PFS+R+T+ESGK ++A +IPANW P Y S VQ+
Sbjct: 302 RLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRSIVQY 421
Score = 92.7 bits (196), Expect(2) = 7e-030
Identities = 45/97 (46%), Positives = 56/97 (57%)
Frame = -2 / -2
Query: 532 LDVGSVDGIGSPVRRDDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLPLSR 353
LD G+V+G G PV RDD+ LAGL G+A EG LE + V PPD +PR H P +
Sbjct: 418 LDDGAVEGAGRPVGRDDLVGHQRLAGLVGDAHGEGRLEAVAGVQPPD*SPRLAHRRPRTG 239
Query: 352 QLVLDFHQHDVAIVRHKLHQHGQVVGVAALLDVEHDL 242
+ + H H VA+ LHQHG+V V LL VE L
Sbjct: 238 VGLHEVHLHHVAVAVLVLHQHGEVHRVRPLLHVEGHL 128
Score = 79.0 bits (166), Expect(2) = 4e-049
Identities = 27/40 (67%), Positives = 37/40 (92%)
Frame = +2 / +2
Query: 113 YHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYP 232
YHFDLSG AFG++AKPGL++KLRH GI+D++F+RV C++P
Sbjct: 2 YHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRVPCEFP 121
Score = 57.9 bits (120), Expect(2) = 7e-030
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = -3 / -3
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW 115
G H TLLN SMMP+ RS SL PG A P A+PL+SKW
Sbjct: 120 GNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKW 4
>gb|BQ753409.1|BQ753409 EBan01_SQ004_D03_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ004_D03 5', mRNA sequence
Length = 677
Score = 191 bits (412), Expect = 4e-048
Identities = 71/129 (55%), Positives = 96/129 (74%)
Frame = +2 / +2
Query: 5 KGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLRH 184
+GCGSC+E++C + CSG P V ITD N EPIA YHFDLSG AFG++AK G KLR
Sbjct: 290 RGCGSCFELKCTKPGACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAKKGQEQKLRD 469
Query: 185 CGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEW 364
G ++++FRRV+CKYP G K+ FH+EKG +PNYLA+++KF+ DGD+V ++I+ K +W
Sbjct: 470 AGEVEIKFRRVKCKYPEGTKVNFHVEKGSSPNYLALVIKFLQGDGDVVAVDIKPKGKDKW 649
Query: 365 KPMKLSWGA 391
+K SWGA
Sbjct: 650 IELKESWGA 676
Score = 108 bits (230), Expect = 5e-023
Identities = 54/128 (42%), Positives = 66/128 (51%)
Frame = -3 / -3
Query: 390 APQESFMGFHSADNLXXXXXXXXXXXSATNFTSTAR*LGLQPFSMWNTIFCPAGYLHRTL 211
AP +S H + L N + AR*LGL+PFS W P+GYLH T
Sbjct: 675 APHDSLSSIHLSLPLGLMSTATTSPSPWRNLITRAR*LGLEPFSTWKFTLVPSGYLHLTR 496
Query: 210 LNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEHSGFSLHL 31
N S P RS P A PKA P +SKW A+GS F+SVM T+ G PE + +HL
Sbjct: 495 RNLISTSPASRSFCSWPFLAMVPKAWPDRSKWYAAMGSSFLSVMVTMVGSPEQAPGLVHL 316
Query: 30 TS*HEPQP 7
+S EPQP
Sbjct: 315 SSKQEPQP 292
>gb|BQ465138.1|BQ465138 HU02M06r HU Hordeum vulgare subsp. vulgare cDNA clone HU02M06
5-PRIME, mRNA sequence
Length = 623
Score = 141 bits (303), Expect(3) = 6e-048
Identities = 50/77 (64%), Positives = 62/77 (80%)
Frame = +2 / +2
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCG+CY+++C + CSG TV ITDMNY P+APYHFDLSG AFG LAKPG ND+LR
Sbjct: 128 GKGCGACYKIKCTKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELR 307
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F RV C++P
Sbjct: 308 HAGIIDIQFTRVACEFP 358
Score = 45.1 bits (92), Expect(3) = 6e-048
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G K+ FH+E+G N Y+A+LV++ DGD+V +++ +
Sbjct: 359 GLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLME 469
Score = 42.8 bits (87), Expect(3) = 6e-048
Identities = 14/30 (46%), Positives = 24/30 (80%)
Frame = +2 / +3
Query: 395 WRMDTAKALKGPFSIRLTSESGKKVIAKDI 484
WR+D+ L+ PFSIR+ +ESGK ++A+++
Sbjct: 534 WRLDSNHRLQAPFSIRIRNESGKTLVARNV 623
>gb|CB880524.1|CB880524 HM06N05w HM Hordeum vulgare subsp. vulgare cDNA clone HM06N05
3-PRIME, mRNA sequence
Length = 545
Score = 117 bits (251), Expect(2) = 7e-048
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +2 / -2
Query: 359 EWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
+W PM LSWGAIWR D A A+K PFSIRLTSESGKK+IA+D+IPANW+PD VY SN+QF
Sbjct: 391 KWIPMTLSWGAIWRWDGANAIKAPFSIRLTSESGKKLIAQDVIPANWKPDTVYQSNIQF 215
Score = 93.2 bits (197), Expect(2) = 7e-048
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +2 / -2
Query: 209 RRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDK 349
RRVRCKY G K+ FH+E G NPNYLA+LVKFVADDGDIV MEIQ+K
Sbjct: 544 RRVRCKYAPGTKVTFHVETGSNPNYLAILVKFVADDGDIVQMEIQEK 404
Score = 90.0 bits (190), Expect(2) = 1e-028
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = -2 / +2
Query: 538 VELDVGSVDGIGSPVRRDDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLPL 359
++LD+ VDG+G PV DDV D+LLAGLAGEAD +G L+R+G+V PPDGAPR+ H PL
Sbjct: 212 LKLDI*LVDGVGLPVGGDDVLGDELLAGLAGEADGKGGLDRIGAVPPPDGAPRQGHRDPL 391
Score = 84.5 bits (178), Expect(2) = 5e-024
Identities = 38/59 (64%), Positives = 43/59 (72%)
Frame = -3 / +3
Query: 537 *NWTLEV*TASGLQFAGMMSLAMTFLPDSLVRRIEKGPLSALAVSILQMAPQESFMGFH 361
*NW + *T SG Q AGM S AM+FLPDSLVRR+EKG L ALA S LQMAP + +G H
Sbjct: 213 *NWIFDW*TVSGFQLAGMTSWAMSFLPDSLVRRMEKGALIALAPSHLQMAPHDKVIGIH 389
Score = 78.5 bits (165), Expect(2) = 9e-026
Identities = 33/61 (54%), Positives = 41/61 (67%)
Frame = +1 / -1
Query: 361 VEAHEALLGRHLEDGHCQGAQGPLLYPPHQRVRQEGHR*RHHPGELETRCRLHFQRPILL 540
V+ + ++GRHLE G Q QGPL +PPHQRVRQE HR HP +LE R RL + P+L
Sbjct: 389 VDPDDLVVGRHLEVGRRQCDQGPLFHPPHQRVRQEAHRPGRHPRQLEARHRLPVKYPVLE 210
Query: 541 D 543
D
Sbjct: 209 D 207
Score = 58.3 bits (121), Expect(2) = 9e-026
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +1 / -1
Query: 208 QKGAVQVPRWAEDRVPHREGLQPQLPGRAGEVCGGRWRHRADGNPGQV 351
Q+GA+QV W + +P R+ L+P+LPG +V R RHRADG+ G++
Sbjct: 545 QEGALQVRAWHQGHLPRRDRLEPKLPGHTRQVRRRRRRHRADGDSGEI 402
Score = 56.5 bits (117), Expect(2) = 1e-028
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = -2 / +2
Query: 355 RQLVLDFHQHDVAIVRHKLHQHGQVVGVAALLDVEHDLLPSGVLAPHP 212
R+ +L+ H HDVA+V +L ++GQVV V A LDVE DL VLA HP
Sbjct: 398 RRFLLNLHLHDVAVVGDELDEYGQVVWVRAGLDVEGDLGARRVLAAHP 541
Score = 46.4 bits (95), Expect(2) = 5e-024
Identities = 19/34 (55%), Positives = 20/34 (58%)
Frame = -3 / +3
Query: 309 ATNFTSTAR*LGLQPFSMWNTIFCPAGYLHRTLL 208
ATN TS AR* G +P S W P YL RTLL
Sbjct: 444 ATNLTSMAR*FGFEPVSTWKVTLVPGAYLQRTLL 545
>gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092D24f, mRNA sequence
Length = 901
Score = 147 bits (316), Expect(3) = 1e-046
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCY++RC CSGNP TV ITDMNY P+A YHFDLSG AFG++AKPGL++KLR
Sbjct: 250 GKGCGSCYQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLR 429
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F+RV C++P
Sbjct: 430 HSGIIDIQFKRVPCEFP 480
Score = 95.5 bits (202), Expect(2) = 2e-027
Identities = 45/77 (58%), Positives = 50/77 (64%)
Frame = -3 / -3
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H TLLN SMMP+ RS SL PG A P A+PL+SKW A G *FMSVM TV+GLPE
Sbjct: 479 GNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQ 300
Query: 51 SGFSLHLTS*HEPQPLP 1
+H * EP PLP
Sbjct: 299 DWSLVHRIW*QEPHPLP 249
Score = 46.9 bits (96), Expect(2) = 2e-027
Identities = 25/64 (39%), Positives = 33/64 (51%)
Frame = -2 / -3
Query: 433 EGALERLGSVHPPDGAPRELHGLPLSRQLVLDFHQHDVAIVRHKLHQHGQVVGVAALLDV 254
+G L+ + V PPDG+PR H P + + H VA+ L QHG+V V LL V
Sbjct: 677 KGRLKPVPEVKPPDGSPRLAHRRPRTEVGSIRSPLHHVAVAVFVLPQHGEVHRVRXLLHV 498
Query: 253 EHDL 242
E L
Sbjct: 497 EGHL 486
Score = 40.5 bits (82), Expect(3) = 1e-046
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +3
Query: 362 WKPMKLSWGAIWRMDTAKALKGPFS 436
W PM+ SWG+IW +D L+ PFS
Sbjct: 606 WTPMRESWGSIWGLDFGHRLQAPFS 680
Score = 37.3 bits (75), Expect(3) = 1e-046
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2 / +3
Query: 242 KIVFHIEKGCNPNYLAVLVKFVADDGDIV 328
++ FH+E+ NP Y AVL ++ DGD+V
Sbjct: 486 QVTFHVEQXSNPVYFAVLGEYEDGDGDVV 572
>gb|BJ463021.1|BJ463021 BJ463021 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25g15 5', mRNA sequence
Length = 532
Score = 92.3 bits (195), Expect(3) = 2e-044
Identities = 31/83 (37%), Positives = 52/83 (62%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAK 415
G I F +++G NP Y L++F DDGD+ + +++ S W M WGA+WR++
Sbjct: 279 GVNIAFRVDQGSNPFYFKTLIEFEDDDGDLKAVALKEAGSGAWTQMTQDWGALWRLNNGN 458
Query: 416 ALKGPFSIRLTSESGKKVIAKDI 484
L+ PFS+RLT +SG+K++ ++
Sbjct: 459 RLRAPFSLRLTXDSGRKLVXNNV 527
Score = 68.0 bits (142), Expect(3) = 2e-044
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +2 / +3
Query: 92 NYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYP 232
N P P HFD+SG A G++AKPG+ DKLR G++ ++++RV CKYP
Sbjct: 138 NLYPGEPCHFDMSGTALGAMAKPGMADKLRAGGVIRMQYKRVPCKYP 278
Score = 60.6 bits (126), Expect(3) = 2e-021
Identities = 27/44 (61%), Positives = 29/44 (65%)
Frame = -3 / -1
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIG 100
GYLH TLL M P RSLS PGFA PKA+PL SKW G+ G
Sbjct: 277 GYLHGTLLYCILMTPPARSLSAMPGFAMAPKAVPLMSKWHGSPG 146
Score = 57.9 bits (120), Expect(3) = 2e-044
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMN 94
GKGCG+CY+V+C CSG PVTV ITD++
Sbjct: 39 GKGCGACYDVKCSSNSACSGKPVTVVITDLS 131
Score = 47.8 bits (98), Expect(3) = 2e-021
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = -3 / -1
Query: 87 SVMNTVTGLPEHSGFSLHLTS*HEPQPLP 1
SVM TVTG PE + HLTS*H PQPLP
Sbjct: 124 SVMTTVTGFPEQAELLEHLTS*HAPQPLP 38
Score = 33.6 bits (67), Expect(3) = 2e-021
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -3 / -1
Query: 489 GMMSLAMTFLPDSLVRRIEKGPLSALAVSILQMAPQ 382
GM L +FLP+S V R EKG S L + APQ
Sbjct: 532 GMTLLXTSFLPESXVSRSEKGARSRLPLLRRHNAPQ 425
>gb|BF260026.3|BF260026 HVSMEf0020O13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020O13f, mRNA sequence
Length = 535
Score = 136 bits (291), Expect(2) = 2e-044
Identities = 51/100 (51%), Positives = 75/100 (75%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAK 415
G KI FH+ +G N YLAVL+++ DGD++ +++++ S W M+ SWG+IWRMD+
Sbjct: 103 GLKINFHVVEGSNAVYLAVLIEYEDMDGDVIQVDMKEANSGSWMAMRESWGSIWRMDSNH 282
Query: 416 ALKGPFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
L+GPFS+R+TS+SGKK++A ++IPANWRP+ Y S VQF
Sbjct: 283 RLQGPFSMRITSDSGKKLVANNVIPANWRPNTDYRSFVQF 402
Score = 96.4 bits (204), Expect(2) = 1e-029
Identities = 49/98 (50%), Positives = 58/98 (59%)
Frame = -2 / -2
Query: 535 ELDVGSVDGIGSPVRRDDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLPLS 356
ELD G+V G+G PV RDD+ LLAG+AG+A E LE + VHPPDG+PR H P
Sbjct: 402 ELDEGAVVGVGPPVGRDDIVGHQLLAGVAGDAHGERPLEAVVGVHPPDGSPRLAHRHPRP 223
Query: 355 RQLVLDFHQHDVAIVRHKLHQHGQVVGVAALLDVEHDL 242
R +L H VA+ L QH QV V AL VE DL
Sbjct: 222 RVGLLHVHLDHVAVHVLVLDQHRQVHRVGALHHVEVDL 109
Score = 79.9 bits (168), Expect(2) = 2e-023
Identities = 40/100 (40%), Positives = 51/100 (51%)
Frame = -3 / -3
Query: 534 NWTLEV*TASGLQFAGMMSLAMTFLPDSLVRRIEKGPLSALAVSILQMAPQESFMGFHSA 355
NWT E *+ GLQ AGM LA +FLP+SLV R+EKGP SI QM P +S + H
Sbjct: 401 NWTKER*SVLGLQLAGMTLLATSFLPESLVMRMEKGPWRRWLESIRQMDPHDSRIAIHDP 222
Query: 354 DNLXXXXXXXXXXXSATNFTSTAR*LGLQPFSMWNTIFCP 235
+ ++ STAR L+P + W I P
Sbjct: 221 ELASFMSTWITSPSMSSYSISTARYTALEPSTTWKLILRP 102
Score = 73.9 bits (155), Expect(2) = 8e-022
Identities = 38/100 (38%), Positives = 53/100 (53%)
Frame = +1 / +3
Query: 241 EDRVPHREGLQPQLPGRAGEVCGGRWRHRADGNPGQVVG*VEAHEALLGRHLEDGHCQGA 420
+D++P GLQ +PG A V G R G+ G +G V+ ++G HL DG
Sbjct: 108 QDQLPRGGGLQRGVPGGADRVRGHGRRRDPGGHEGGQLGVVDGDARVVGIHLADGLQPPP 287
Query: 421 QGPLLYPPHQRVRQEGHR*RHHPGELETRCRLHFQRPILL 540
G L+ HQR+RQE + HPG+LE + RL RP+ L
Sbjct: 288 PGAFLHAHHQRLRQEAGGQQCHPGQLEAQHRLPLLRPVQL 407
Score = 63.4 bits (132), Expect(2) = 2e-044
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +2 / +1
Query: 131 GKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYP 232
G AFG+LAK GLN+KLRH GI+D++FRRV C +P
Sbjct: 1 GTAFGALAKSGLNEKLRHSGIIDIQFRRVPCNFP 102
Score = 53.3 bits (110), Expect(2) = 1e-029
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -3 / -3
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKAL 133
G LH TLLN SMMP+WRS SL P AR PKA+
Sbjct: 101 GKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAV 3
Score = 49.6 bits (102), Expect(2) = 8e-022
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1 / +3
Query: 136 GLRLPGKARAQRQASPLRHHGRRVQKGAVQVPR 234
GLR PG+ QR+A PL HH VQ+GAVQ+PR
Sbjct: 6 GLRRPGQVGPQREAPPLGHHRHPVQEGAVQLPR 104
Score = 49.2 bits (101), Expect(2) = 2e-023
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = -2 / -2
Query: 241 LPSGVLAPHPSELDVHDAAVAKLVVEPGLCQGAEGLA 131
L +G +A HP ELDV DA VA+L+VE L QGAEG A
Sbjct: 111 LEAGEVARHPPELDVDDARVAELLVEARLGQGAEGRA 1
>gb|BQ661443.1|BQ661443 HM03I08u HM Hordeum vulgare subsp. vulgare cDNA clone HM03I08
3-PRIME, mRNA sequence
Length = 520
Score = 117 bits (251), Expect(2) = 4e-044
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +2 / -3
Query: 359 EWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
+W PM LSWGAIWR D A A+K PFSIRLTSESGKK+IA+D+IPANW+PD VY SN+QF
Sbjct: 380 KWIPMTLSWGAIWRWDGANAIKAPFSIRLTSESGKKLIAQDVIPANWKPDTVYQSNIQF 204
Score = 93.6 bits (198), Expect(2) = 3e-027
Identities = 39/60 (65%), Positives = 47/60 (78%)
Frame = -2 / +3
Query: 538 VELDVGSVDGIGSPVRRDDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLPL 359
+ELD+ VDG+G PV DDV D+LLAGLAGEAD EG L+R+G+V PPDGAPR+ H PL
Sbjct: 201 LELDI*LVDGVGLPVGGDDVLGDELLAGLAGEADGEGGLDRIGAVPPPDGAPRQGHRDPL 380
Score = 84.5 bits (178), Expect(2) = 1e-021
Identities = 38/59 (64%), Positives = 43/59 (72%)
Frame = -3 / +1
Query: 537 *NWTLEV*TASGLQFAGMMSLAMTFLPDSLVRRIEKGPLSALAVSILQMAPQESFMGFH 361
*NW + *T SG Q AGM S AM+FLPDSLVRR+EKG L ALA S LQMAP + +G H
Sbjct: 202 *NWIFDW*TVSGFQLAGMTSWAMSFLPDSLVRRMEKGALIALAPSHLQMAPHDKVIGIH 378
Score = 80.3 bits (169), Expect(2) = 5e-024
Identities = 34/61 (55%), Positives = 42/61 (68%)
Frame = +1 / -2
Query: 361 VEAHEALLGRHLEDGHCQGAQGPLLYPPHQRVRQEGHR*RHHPGELETRCRLHFQRPILL 540
V+ + ++GRHLE G Q QGPLL+PPHQRVRQE HR HP +LE R RL + P+L
Sbjct: 378 VDPDDLVVGRHLEVGRRQCDQGPLLHPPHQRVRQEAHRPGRHPRQLEARHRLPVKYPVLE 199
Query: 541 D 543
D
Sbjct: 198 D 196
Score = 80.3 bits (169), Expect(2) = 4e-044
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +2 / -3
Query: 224 KYPAGQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDK 349
KY G K+ FH+E G NPNYLA+LVKFVADDGDIV MEIQ+K
Sbjct: 518 KYAPGTKVTFHVETGSNPNYLAILVKFVADDGDIVQMEIQEK 393
Score = 50.6 bits (104), Expect(2) = 5e-024
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +1 / -2
Query: 223 QVPRWAEDRVPHREGLQPQLPGRAGEVCGGRWRHRADGNPGQV 351
QV W + +P R+ L+P+LPG +V R RHRADG+ G++
Sbjct: 519 QVRAWHQGHLPRRDRLEPKLPGHTRQVRRRRRRHRADGDSGEI 391
Score = 48.3 bits (99), Expect(2) = 3e-027
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -2 / +3
Query: 355 RQLVLDFHQHDVAIVRHKLHQHGQVVGVAALLDVEHDL 242
R+ +L+ H HDVA+V +L ++GQVV V A LDVE DL
Sbjct: 387 RRFLLNLHLHDVAVVGDELDEYGQVVWVRAGLDVEGDL 500
Score = 38.6 bits (78), Expect(2) = 1e-021
Identities = 22/53 (41%), Positives = 26/53 (49%)
Frame = -1 / +2
Query: 380 RASWASTQPTTCPGFPSARCRHRPPQTSPARPGSWGCSPSRCGTRSSAQRGTC 222
R+S ++ P PSARCR R +T PGS G S SR G Q TC
Sbjct: 362 RSSGSTWWAPISPESPSARCRRRRRRT*RVWPGSLGSSRSRRGR*PWCQARTC 520
>gb|BM097618.2|BM097618 EBem04_SQ002_D15_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_D15 5', mRNA sequence
Length = 477
Score = 114 bits (243), Expect(3) = 3e-043
Identities = 43/73 (58%), Positives = 55/73 (75%)
Frame = +2 / +3
Query: 14 GSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGI 193
G+ + RC CSG P TV ITDMNY P++ YHFDLSG AFG++AK G ND+LRH GI
Sbjct: 24 GAAHATRCVAHRACSGVPETVIITDMNYYPVSRYHFDLSGTAFGAMAKYGRNDELRHAGI 203
Query: 194 MDVEFRRVRCKYP 232
+D++F+RV C+YP
Sbjct: 204 IDMQFKRVPCQYP 242
Score = 88.1 bits (186), Expect(3) = 3e-027
Identities = 42/73 (57%), Positives = 49/73 (67%)
Frame = -3 / -3
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
GY H TLLN SMMP WRS SL P A PKA+PL+SK * G *FMSVM TV+G PE
Sbjct: 241 GYWHGTLLNCMSMMPAWRSSSLRPYLAMAPKAVPLRSK**RETG**FMSVMITVSGTPEQ 62
Query: 51 SGFSLHLTS*HEP 13
+ ++ HL +* P
Sbjct: 61 ARWATHLVA*AAP 23
Score = 53.8 bits (111), Expect(3) = 3e-043
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = +2 / +3
Query: 362 WKPMKLSWGAIWRMDTAKALKGPFSIRLT 448
W PM+ SWG+IWR+D + L+GPFS+R+T
Sbjct: 387 WTPMRESWGSIWRLDRLRPLQGPFSLRVT 473
Score = 45.5 bits (93), Expect(3) = 3e-043
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G + F ++ G NPNYLA+LV++ DGD+ ++I +
Sbjct: 243 GLTVTFRVQHGSNPNYLAILVEYEDGDGDVAQVDIME 353
Score = 35.9 bits (72), Expect(3) = 3e-027
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2 / -2
Query: 448 GEADREGALERLGSVHPPDGAPRELHGLPLSRQ 350
G+A RE L+R V PDG+PR H P+ R+
Sbjct: 473 GDAQREWPLQRAEPVQAPDGSPRLPHRRPVPRR 375
Score = 35.4 bits (71), Expect(3) = 3e-027
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -1 / -1
Query: 344 PGFPSARCRHRPPQTSPARPGSWGCSPSRCGT 249
P P A R R P+T P PGSWG + + GT
Sbjct: 351 PLCPPAPRRRRRPRTPPGSPGSWGWTRAARGT 256
>gb|BQ469137.1|BQ469137 HM03I08r HM Hordeum vulgare subsp. vulgare cDNA clone HM03I08
5-PRIME, mRNA sequence
Length = 616
Score = 173 bits (372), Expect = 1e-042
Identities = 64/98 (65%), Positives = 76/98 (77%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCYEV+C + P CS P+TVFITD NYEPIAPYH DLSGKAFG++A G LR
Sbjct: 321 GKGCGSCYEVKCNKPPPCSDKPITVFITDKNYEPIAPYHIDLSGKAFGAMATAGNEQTLR 500
Query: 182 HCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVL 295
G ++++FRRVRCKY G K+ FH+E G NPNYLA+L
Sbjct: 501 SFGELELQFRRVRCKYAPGTKVTFHVETGSNPNYLAIL 614
Score = 126 bits (270), Expect = 1e-028
Identities = 57/99 (57%), Positives = 63/99 (63%)
Frame = -3 / -1
Query: 297 TSTAR*LGLQPFSMWNTIFCPAGYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSK 118
TS AR* G +P S W P YL RTLLN +S P RS+ P A PKALP +S
Sbjct: 616 TSMAR*FGFEPVSTWKVTLVPGAYLQRTLLNCSSSSPNERSVCSFPAVAMAPKALPDRSM 437
Query: 117 W*GAIGS*FMSVMNTVTGLPEHSGFSLHLTS*HEPQPLP 1
W GA+GS*F+SVM TV GL EH G LHLTS* EP PLP
Sbjct: 436 WYGAMGS*FLSVMKTVMGLSEHGGGLLHLTS*QEPHPLP 320
>gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016J13f, mRNA sequence
Length = 656
Score = 147 bits (316), Expect(2) = 1e-042
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCY++RC CSGNP TV ITDMNY P+A YHFDLSG AFG++AKPGL++KLR
Sbjct: 324 GKGCGSCYQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLR 503
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F+RV C++P
Sbjct: 504 HSGIIDIQFKRVPCEFP 554
Score = 95.5 bits (202), Expect(2) = 1e-023
Identities = 45/77 (58%), Positives = 50/77 (64%)
Frame = -3 / -2
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H TLLN SMMP+ RS SL PG A P A+PL+SKW A G *FMSVM TV+GLPE
Sbjct: 553 GNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQ 374
Query: 51 SGFSLHLTS*HEPQPLP 1
+H * EP PLP
Sbjct: 373 DWSLVHRIW*QEPHPLP 323
Score = 45.5 bits (93), Expect(2) = 1e-042
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIV 328
G K+ FH+E+G NP Y AVLV++ DGD V
Sbjct: 555 GLKVTFHVEQGSNPVYFAVLVEYEDGDGDXV 647
Score = 34.1 bits (68), Expect(2) = 1e-023
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -2 / -1
Query: 334 HQHDVAIVRHKLHQHGQVVGVAALLDVEHDL 242
H H VA+ LHQHG+V V LL VE L
Sbjct: 653 HXHXVAVAVLVLHQHGEVHRVRPLLHVEGHL 561
>gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010F11f, mRNA sequence
Length = 630
Score = 147 bits (316), Expect(2) = 5e-042
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCY++RC CSGNP TV ITDMNY P+A YHFDLSG AFG++AKPGL++KLR
Sbjct: 286 GKGCGSCYQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLR 465
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F+RV C++P
Sbjct: 466 HSGIIDIQFKRVPCEFP 516
Score = 95.5 bits (202), Expect(2) = 1e-023
Identities = 45/77 (58%), Positives = 50/77 (64%)
Frame = -3 / -2
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H TLLN SMMP+ RS SL PG A P A+PL+SKW A G *FMSVM TV+GLPE
Sbjct: 515 GNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQ 336
Query: 51 SGFSLHLTS*HEPQPLP 1
+H * EP PLP
Sbjct: 335 DWSLVHRIW*QEPHPLP 285
Score = 43.7 bits (89), Expect(2) = 5e-042
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G K+ FH+E+G NP Y VLV++ DG++V +++ +
Sbjct: 517 GLKVTFHVEQGSNPVYFPVLVEY*DGDGNLVQVDLME 627
Score = 34.5 bits (69), Expect(2) = 1e-023
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2 / -1
Query: 340 DFHQHDVAIVRHKLHQHGQVVGVAALLDVEHDL 242
+ H H VA+ LHQHG+V V LL VE L
Sbjct: 621 EVHLHQVAVAVLVLHQHGEVHRVRPLLHVEGHL 523
>gb|CV058074.1|CV058074 BNEL34a7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL34a7 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 630
Score = 91.8 bits (194), Expect(3) = 2e-041
Identities = 32/66 (48%), Positives = 49/66 (74%)
Frame = +2 / +3
Query: 353 SAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQ 532
+ +W PMK SWG+IWRMD + GPFS+R+T+ESGK ++A +I +W+P+ Y+S VQ
Sbjct: 270 TGQWVPMKESWGSIWRMDAHHPMHGPFSLRVTNESGKTLVADQVIXGDWKPNKTYSSLVQ 449
Query: 533 FY*TLN 550
F+* ++
Sbjct: 450 FH*LID 467
Score = 70.3 bits (147), Expect(2) = 3e-023
Identities = 29/65 (44%), Positives = 40/65 (61%)
Frame = -2 / -2
Query: 553 AIQSLVELDVGSVDGIGSPVRRDDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPREL 374
+I LV+LD G+V + P+ DD+ D+ L GL G+A RE + + +HPPD PR L
Sbjct: 470 SIDQLVKLDKGAVGFVRLPIAXDDLVGDERLPGLVGDAQREWPMHGVVGIHPPDRPPRLL 291
Query: 373 HGLPL 359
HG PL
Sbjct: 290 HGHPL 276
Score = 69.8 bits (146), Expect(3) = 2e-041
Identities = 25/39 (64%), Positives = 34/39 (87%)
Frame = +2 / +3
Query: 116 HFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYP 232
HFDLSG AFG++AK G ND+LRH GI++++F+RV C+YP
Sbjct: 3 HFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQYP 119
Score = 60.2 bits (125), Expect(2) = 3e-023
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = -3 / -3
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW 115
GY H TLLN +MP WRS SL P A PKA+PL+SKW
Sbjct: 118 GYWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW 2
Score = 46.0 bits (94), Expect(3) = 2e-041
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G + FH+E+G NP Y+A+LV++ DGD+ ++I +
Sbjct: 120 GLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIME 230
>gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL105f8 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 702
Score = 110 bits (234), Expect(4) = 3e-041
Identities = 40/64 (62%), Positives = 53/64 (82%)
Frame = +2 / +3
Query: 41 EKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVR 220
+ P CSG P TV ITDMNY+P++ YHFDLSG AFG++AK G ND+LRH GI++++F+RV
Sbjct: 309 DHPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVP 488
Query: 221 CKYP 232
C+YP
Sbjct: 489 CQYP 500
Score = 94.1 bits (199), Expect(3) = 8e-023
Identities = 41/64 (64%), Positives = 46/64 (71%)
Frame = -3 / -3
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
GY H TLLN +MP WRS SL P A PKA+PL+SKW* GS*FMSVM TV G PEH
Sbjct: 499 GYWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEH 320
Query: 51 SGFS 40
+G+S
Sbjct: 319 AGWS 308
Score = 46.0 bits (94), Expect(4) = 3e-041
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G + FH+E+G NP Y+A+LV++ DGD+ ++I +
Sbjct: 501 GLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIME 611
Score = 35.4 bits (71), Expect(4) = 3e-041
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRC 37
GKGCGSCY++RC
Sbjct: 264 GKGCGSCYQIRC 299
Score = 33.1 bits (66), Expect(4) = 3e-041
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / +3
Query: 353 SAEWKPMKLSWGAIWRM 403
+ +W PMK SW +IWRM
Sbjct: 651 TGQWVPMKESWXSIWRM 701
Score = 30.4 bits (60), Expect(3) = 8e-023
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 403 HPPDGAPRELHGLPL 359
HPPD PR LHG PL
Sbjct: 701 HPPDRPPRLLHGHPL 657
Score = 23.1 bits (44), Expect(3) = 8e-023
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3 / -3
Query: 36 HLTS*HEPQPLP 1
HL * EPQPLP
Sbjct: 298 HLIW*QEPQPLP 263
>gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019F12f, mRNA sequence
Length = 669
Score = 147 bits (316), Expect(2) = 3e-041
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +2
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCY++RC CSGNP TV ITDMNY P+A YHFDLSG AFG++AKPGL++KLR
Sbjct: 338 GKGCGSCYQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLR 517
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F+RV C++P
Sbjct: 518 HSGIIDIQFKRVPCEFP 568
Score = 95.5 bits (202), Expect(2) = 4e-024
Identities = 45/77 (58%), Positives = 50/77 (64%)
Frame = -3 / -1
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H TLLN SMMP+ RS SL PG A P A+PL+SKW A G *FMSVM TV+GLPE
Sbjct: 567 GNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQ 388
Query: 51 SGFSLHLTS*HEPQPLP 1
+H * EP PLP
Sbjct: 387 DWSLVHRIW*QEPHPLP 337
Score = 40.9 bits (83), Expect(2) = 3e-041
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2 / +1
Query: 242 KIVFHIEKGCNPNYLAVLVKFVADDGDIVLME 337
++ FH+E+G NP Y AVLV++ DG +V ++
Sbjct: 574 QVTFHVEQGSNPVYFAVLVEYQDGDGHVVQVD 669
Score = 35.9 bits (72), Expect(2) = 4e-024
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = -2 / -1
Query: 334 HQHDVAIVRHKLHQHGQVVGVAALLDVEHDLLP 236
H H VA+ LHQHG+V V LL VE L P
Sbjct: 666 HLHHVAVAVLVLHQHGEVHRVRPLLHVEGHLRP 568
>gb|BE454367.2|BE454367 HVSMEh0093N18f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0093N18f, mRNA sequence
Length = 870
Score = 107 bits (228), Expect(3) = 9e-041
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +2 / +1
Query: 74 VFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYP 232
V ITDMNY P+APYHFDLSG AFG LAKPGLND+LRH GI+D+EF RV C++P
Sbjct: 1 VIITDMNYYPVAPYHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPCEFP 159
Score = 85.8 bits (181), Expect(3) = 1e-028
Identities = 37/51 (72%), Positives = 41/51 (80%)
Frame = -3 / -2
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVM 79
G H T +NS SMMP+WRSLSLSPGFA P A+PL+SKW*GA G *FMSVM
Sbjct: 158 GNSHGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG**FMSVM 6
Score = 53.3 bits (110), Expect(3) = 9e-041
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +2 / +1
Query: 329 LMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIPANWRP 505
LME + +W M+ SWG++WR++ L+ PF I++ + G+ + +P WRP
Sbjct: 262 LMESRGPGGGKWTRMRESWGSVWRLNCNHRLQAPFCIQVRDKCGETLGGSMGVPGRWRP 438
Score = 44.6 bits (91), Expect(3) = 9e-041
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G KI FH+E+ NP Y AVLV++ DGD+V +++ +
Sbjct: 160 GLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLME 270
Score = 39.6 bits (80), Expect(3) = 1e-028
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -2 / -1
Query: 340 DFHQHDVAIVRHKLHQHGQVVGVAALLDVEHDLLP 236
+ H H VA+ LHQH +V GV LL VE DL P
Sbjct: 264 EVHLHHVAVAVLVLHQHREVDGVRVLLHVEPDLEP 160
Score = 39.1 bits (79), Expect(3) = 1e-028
Identities = 21/52 (40%), Positives = 25/52 (48%)
Frame = -2 / -1
Query: 511 GIGSPVRRDDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLPLS 356
G G P R + LA L D E L+ + +V PDGAPR H PLS
Sbjct: 444 GAGPPAARHPHAAP*CLAALVPHLDAEWRLQPVVAVQAPDGAPRLPHPRPLS 289
>gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024K16f, mRNA sequence
Length = 677
Score = 147 bits (316), Expect(2) = 1e-040
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +2
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCY++RC CSGNP TV ITDMNY P+A YHFDLSG AFG++AKPGL++KLR
Sbjct: 338 GKGCGSCYQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLR 517
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F+RV C++P
Sbjct: 518 HSGIIDIQFKRVPCEFP 568
Score = 95.5 bits (202), Expect(2) = 4e-022
Identities = 45/77 (58%), Positives = 50/77 (64%)
Frame = -3 / -3
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H TLLN SMMP+ RS SL PG A P A+PL+SKW A G *FMSVM TV+GLPE
Sbjct: 567 GNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQ 388
Query: 51 SGFSLHLTS*HEPQPLP 1
+H * EP PLP
Sbjct: 387 DWSLVHRIW*QEPHPLP 337
Score = 39.1 bits (79), Expect(2) = 1e-040
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEI 340
G K+ H+E+G NP Y VLV++ D D V +++
Sbjct: 569 GLKVTXHVEQGSNPVYFXVLVEYXDGDXDXVQVDL 673
Score = 29.0 bits (57), Expect(2) = 4e-022
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2 / -2
Query: 340 DFHQHDVAIVRHKLHQHGQVVGVAALLDV 254
+ H H V + LHQHG+V V LL V
Sbjct: 673 EVHLHXVPVAVLVLHQHGEVHRVRPLLHV 587
>gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. vulgare cDNA clone HV14A15
5-PRIME, mRNA sequence
Length = 616
Score = 141 bits (303), Expect(2) = 1e-040
Identities = 50/77 (64%), Positives = 62/77 (80%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCG+CY+++C + CSG TV ITDMNY P+APYHFDLSG AFG LAKPG ND+LR
Sbjct: 211 GKGCGACYKIKCTKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELR 390
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F RV C++P
Sbjct: 391 HAGIIDIQFTRVACEFP 441
Score = 45.1 bits (92), Expect(2) = 1e-040
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G K+ FH+E+G N Y+A+LV++ DGD+V +++ +
Sbjct: 442 GLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLME 552
>gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL87h3 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 701
Score = 110 bits (234), Expect(4) = 2e-040
Identities = 40/64 (62%), Positives = 53/64 (82%)
Frame = +2 / +3
Query: 41 EKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVR 220
+ P CSG P TV ITDMNY+P++ YHFDLSG AFG++AK G ND+LRH GI++++F+RV
Sbjct: 315 DHPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVP 494
Query: 221 CKYP 232
C+YP
Sbjct: 495 CQYP 506
Score = 44.6 bits (91), Expect(4) = 2e-040
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +2 / +3
Query: 245 IVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
+ FH+E+G NP Y+A+LV++ DGD+ ++I +
Sbjct: 516 VTFHVEEGSNPFYMAILVEYENGDGDVKQLDIME 617
Score = 35.4 bits (71), Expect(4) = 2e-040
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRC 37
GKGCGSCY++RC
Sbjct: 270 GKGCGSCYQIRC 305
Score = 31.8 bits (63), Expect(4) = 2e-040
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2 / +3
Query: 353 SAEWKPMKLSWGAIW 397
+ +W PMK SWG+IW
Sbjct: 657 TGQWVPMKESWGSIW 701
>gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09C23
5-PRIME, mRNA sequence
Length = 653
Score = 147 bits (316), Expect(2) = 2e-040
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCY++RC CSGNP TV ITDMNY P+A YHFDLSG AFG++AKPGL++KLR
Sbjct: 346 GKGCGSCYQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLR 525
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F+RV C++P
Sbjct: 526 HSGIIDIQFKRVPCEFP 576
Score = 95.5 bits (202), Expect(2) = 3e-021
Identities = 45/77 (58%), Positives = 50/77 (64%)
Frame = -3 / -1
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H TLLN SMMP+ RS SL PG A P A+PL+SKW A G *FMSVM TV+GLPE
Sbjct: 575 GNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQ 396
Query: 51 SGFSLHLTS*HEPQPLP 1
+H * EP PLP
Sbjct: 395 DWSLVHRIW*QEPHPLP 345
Score = 38.2 bits (77), Expect(2) = 2e-040
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKF 304
G K+ FH+E+G NP Y AVLV++
Sbjct: 577 GLKVTFHVEQGSNPVYFAVLVEY 645
Score = 26.3 bits (51), Expect(2) = 3e-021
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2 / -3
Query: 301 LHQHGQVVGVAALLDVEHDL 242
LHQHG+V V LL VE L
Sbjct: 642 LHQHGEVHRVRPLLHVEGHL 583
>gb|BU995044.1|BU995044 HM09A07r HM Hordeum vulgare subsp. vulgare cDNA clone HM09A07
5-PRIME, mRNA sequence
Length = 628
Score = 140 bits (300), Expect(2) = 3e-040
Identities = 52/92 (56%), Positives = 66/92 (71%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
G+GCGSC+E++C + CSG P V ITD N EPIA YHFDLSG AFG++AK G KLR
Sbjct: 283 GRGCGSCFELKCTKPEACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAKKGQEQKLR 462
Query: 182 HCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNP 277
G ++++FRRV+CKYP G K+ FH +G P
Sbjct: 463 DAGEVEIKFRRVKCKYPEGTKVNFHXGEGLQP 558
Score = 88.6 bits (187), Expect(2) = 1e-021
Identities = 42/92 (45%), Positives = 50/92 (54%)
Frame = -3 / -3
Query: 276 GLQPFSMWNTIFCPAGYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS 97
G P W P+GYLH T N S P RS P A PKA P +SKW A+GS
Sbjct: 557 GWSPSPXWKFTLVPSGYLHLTRRNLISTSPASRSFCSWPFLAMVPKAWPDRSKWYAAMGS 378
Query: 96 *FMSVMNTVTGLPEHSGFSLHLTS*HEPQPLP 1
F+SVM T+ G PE + +HL+S EPQP P
Sbjct: 377 SFLSVMVTMVGSPEQASGLVHLSSKQEPQPRP 282
Score = 45.1 bits (92), Expect(2) = 3e-040
Identities = 16/28 (57%), Positives = 24/28 (85%)
Frame = +2 / +2
Query: 260 EKGCNPNYLAVLVKFVADDGDIVLMEIQ 343
EKG +PNYLA++VKF+ DGD+V ++I+
Sbjct: 542 EKGSSPNYLALVVKFLQGDGDVVAVDIK 625
Score = 34.5 bits (69), Expect(2) = 1e-021
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2 / -1
Query: 343 LDFHQHDVAIVRHKLHQHGQVVGVAALL 260
LD H H VA+ +L G+VVG ALL
Sbjct: 625 LDVHGHHVAVALEELDNQGEVVGAGALL 542
>gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020N13f, mRNA sequence
Length = 630
Score = 147 bits (316), Expect(2) = 6e-040
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCY++RC CSGNP TV ITDMNY P+A YHFDLSG AFG++AKPGL++KLR
Sbjct: 333 GKGCGSCYQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLR 512
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F+RV C++P
Sbjct: 513 HSGIIDIQFKRVPCEFP 563
Score = 95.5 bits (202), Expect(2) = 4e-021
Identities = 45/77 (58%), Positives = 50/77 (64%)
Frame = -3 / -3
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H TLLN SMMP+ RS SL PG A P A+PL+SKW A G *FMSVM TV+GLPE
Sbjct: 562 GNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQ 383
Query: 51 SGFSLHLTS*HEPQPLP 1
+H * EP PLP
Sbjct: 382 DWSLVHRIW*QEPHPLP 332
Score = 36.8 bits (74), Expect(2) = 6e-040
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVK 301
G K+ FH+E+G NP Y AVLV+
Sbjct: 564 GLKVTFHVEQGSNPVYFAVLVE 629
Score = 25.8 bits (50), Expect(2) = 4e-021
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2 / -2
Query: 301 LHQHGQVVGVAALLDVEHDL 242
LHQHG+V V LL VE L
Sbjct: 629 LHQHGKVHRVRPLLHVEGHL 570
>gb|BE230894.2|BE230894 HVSMEg0001I02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0001I02f, mRNA sequence
Length = 606
Score = 163 bits (351), Expect = 9e-040
Identities = 61/102 (59%), Positives = 79/102 (77%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
G+GCGSC+E++C + CSG P V ITD N EPIA YHFDLSG AFG++AK G KLR
Sbjct: 262 GRGCGSCFELKCTKPEACSGEPTIVTITDKNEEPIAAYHFDLSGHAFGTMAKEGQ*QKLR 441
Query: 182 HCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKFV 307
G ++++FRRV+CKYP G K+ FH+EKG +PNYLA++VKF+
Sbjct: 442 DAGEVEIKFRRVKCKYPEGTKVNFHVEKGSSPNYLALVVKFL 567
Score = 111 bits (237), Expect = 5e-024
Identities = 51/101 (50%), Positives = 61/101 (60%)
Frame = -3 / -2
Query: 303 NFTSTAR*LGLQPFSMWNTIFCPAGYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLK 124
N T+ AR*LGL+PFS W P+GYLH T N S P RS P A PKA P +
Sbjct: 563 NLTTRAR*LGLEPFSTWKFTLVPSGYLHLTRRNLISTSPASRSFCYWPSLAMVPKAWPDR 384
Query: 123 SKW*GAIGS*FMSVMNTVTGLPEHSGFSLHLTS*HEPQPLP 1
SKW A+GS F+SVM T+ G PE + +HL+S EPQP P
Sbjct: 383 SKWYAAMGSSFLSVMVTMVGSPEQASGLVHLSSKQEPQPRP 261
>gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021G03f, mRNA sequence
Length = 682
Score = 147 bits (316), Expect(2) = 1e-038
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCY++RC CSGNP TV ITDMNY P+A YHFDLSG AFG++AKPGL++KLR
Sbjct: 315 GKGCGSCYQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLR 494
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F+RV C++P
Sbjct: 495 HSGIIDIQFKRVPCEFP 545
Score = 32.7 bits (65), Expect(2) = 1e-038
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2 / +2
Query: 242 KIVFHIEKGCNPNYLAVL 295
K+ FH+E+G NP Y AVL
Sbjct: 551 KVTFHVEQGSNPVYFAVL 604
>gb|BM442090.2|BM442090 EBan01_SQ002_C16_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ002_C16 5', mRNA sequence
Length = 389
Score = 159 bits (341), Expect = 2e-038
Identities = 56/104 (53%), Positives = 78/104 (75%)
Frame = +2 / +2
Query: 206 FRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSW 385
FRRV+CKYP G K+ FH+EKG +PNYLA+++KF+ DGD+V ++I+ K +W +K SW
Sbjct: 2 FRRVKCKYPEGTKVNFHVEKGSSPNYLALVIKFLQGDGDVVAVDIKPKGKDKWIELKESW 181
Query: 386 GAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIPANWRPDAVY 517
GA+WR+DT L GPFS+R T+E G K +A+D+IP W+PD Y
Sbjct: 182 GAVWRIDTPDKLIGPFSVRYTTEGGTKTVAEDVIPEGWKPDTFY 313
>gb|BF256653.2|BF256653 HVSMEf0010J19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010J19f, mRNA sequence
Length = 841
Score = 141 bits (303), Expect(2) = 2e-038
Identities = 50/77 (64%), Positives = 62/77 (80%)
Frame = +2 / +2
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCG+CY+++C + CSG TV ITDMNY P+APYHFDLSG AFG LAKPG ND+LR
Sbjct: 428 GKGCGACYKIKCTKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELR 607
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F RV C++P
Sbjct: 608 HAGIIDIQFTRVACEFP 658
Score = 37.3 bits (75), Expect(2) = 2e-038
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLME 337
G K+ FH+E+G N Y+A+ V+ DGD+V ++
Sbjct: 659 GLKVGFHVEEGSNAVYMAIPVEVENRDGDLVQVD 760
>gb|BI960089.1|BI960089 HVSMEn0023C15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023C15f, mRNA sequence
Length = 646
Score = 149 bits (320), Expect(2) = 2e-038
Identities = 54/77 (70%), Positives = 64/77 (83%)
Frame = +2 / +2
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCY++RC++ CSG TV ITDMNY P+APYHFDLSG AFG LAKPGLND+LR
Sbjct: 356 GKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAPYHFDLSGTAFGRLAKPGLNDRLR 535
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D+EF RV C++P
Sbjct: 536 HSGIIDIEFTRVPCEFP 586
Score = 116 bits (247), Expect(2) = 7e-027
Identities = 52/77 (67%), Positives = 57/77 (74%)
Frame = -3 / -2
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H T +NS SMMP+WRSLSLSPGFA P A+PL+SKW*GA G *FMSVM TV+ LPE
Sbjct: 585 GNSHGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMITVSVLPEQ 406
Query: 51 SGFSLHLTS*HEPQPLP 1
LHL *HEP PLP
Sbjct: 405 DWSFLHLIL*HEPHPLP 355
Score = 29.5 bits (58), Expect(2) = 2e-038
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVL 295
G KI FH+E+ NP Y AVL
Sbjct: 587 GLKIGFHVEEYSNPVYFAVL 646
Score = 24.4 bits (47), Expect(2) = 7e-027
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3 / -2
Query: 294 STAR*LGLQPFSMWNTIFCP 235
STA+* G + S WN I P
Sbjct: 645 STAK*TGFEYSSTWNPILSP 586
>gb|BF253787.2|BF253787 HVSMEf0002C01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002C01f, mRNA sequence
Length = 823
Score = 104 bits (221), Expect(3) = 4e-038
Identities = 38/53 (71%), Positives = 45/53 (84%)
Frame = +2 / +3
Query: 74 VFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYP 232
V ITDMNY P+APYHFDLSG AFG LAKPG ND+LRH GI+D++F RV C++P
Sbjct: 3 VMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFP 161
Score = 47.8 bits (98), Expect(3) = 4e-038
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2 / +3
Query: 362 WKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIP 490
W PM SWG+IWR+ ++ P+SIR+ E G +I + +IP
Sbjct: 303 WTPMLKSWGSIWRLYYNHGIQTPYSIRIRCEFG*TLIMRILIP 431
Score = 44.6 bits (91), Expect(3) = 4e-038
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = +2 / +3
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G K+ FH+E+G N Y+A+LV++ DGD+V +++ +
Sbjct: 162 GLKVGFHVEEGSNAVYMAILVEYENGDGDVVHVDLME 272
>gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024E17f, mRNA sequence
Length = 875
Score = 147 bits (316), Expect(2) = 9e-038
Identities = 52/77 (67%), Positives = 65/77 (84%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCY++RC CSGNP TV ITDMNY P+A YHFDLSG AFG++AKPGL++KLR
Sbjct: 324 GKGCGSCYQIRCTNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLR 503
Query: 182 HCGIMDVEFRRVRCKYP 232
H GI+D++F+RV C++P
Sbjct: 504 HSGIIDIQFKRVPCEFP 554
Score = 95.5 bits (202), Expect(2) = 9e-024
Identities = 45/77 (58%), Positives = 50/77 (64%)
Frame = -3 / -2
Query: 231 GYLHRTLLNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEH 52
G H TLLN SMMP+ RS SL PG A P A+PL+SKW A G *FMSVM TV+GLPE
Sbjct: 553 GNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQ 374
Query: 51 SGFSLHLTS*HEPQPLP 1
+H * EP PLP
Sbjct: 373 DWSLVHRIW*QEPHPLP 323
Score = 34.5 bits (69), Expect(2) = 9e-024
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2 / -2
Query: 334 HQHDVAIVRHKLHQHGQVVGVAALLDVEHDLLP 236
H H V + LHQHG+V V LL V+ L P
Sbjct: 652 HMHQVPVAVLVLHQHGEVHRVVPLLHVQXHLSP 554
Score = 29.5 bits (58), Expect(2) = 9e-038
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2 / +2
Query: 242 KIVFHIEKGCNPNYLAVLVKFVADDGDIV 328
++ H+E+G NP Y VLV++ D +V
Sbjct: 560 QVXLHVEQGYNPVYFTVLVEYEDRDRYLV 646
>gb|AV928430.1|AV928430 AV928430 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basdg18 3', mRNA sequence
Length = 704
Score = 136 bits (291), Expect(2) = 2e-037
Identities = 51/100 (51%), Positives = 75/100 (75%)
Frame = +2 / -2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAK 415
G KI FH+ +G N YLAVL+++ DGD++ +++++ S W M+ SWG+IWRMD+
Sbjct: 643 GLKINFHVVEGSNAVYLAVLIEYEDMDGDVIQVDMKEANSGSWMAMRESWGSIWRMDSNH 464
Query: 416 ALKGPFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQF 535
L+GPFS+R+TS+SGKK++A ++IPANWRP+ Y S VQF
Sbjct: 463 RLQGPFSMRITSDSGKKLVANNVIPANWRPNTDYRSFVQF 344
Score = 96.4 bits (204), Expect(2) = 2e-024
Identities = 49/98 (50%), Positives = 58/98 (59%)
Frame = -2 / +2
Query: 535 ELDVGSVDGIGSPVRRDDVFSDDLLAGLAGEADREGALERLGSVHPPDGAPRELHGLPLS 356
ELD G+V G+G PV RDD+ LLAG+AG+A E LE + VHPPDG+PR H P
Sbjct: 344 ELDEGAVVGVGPPVGRDDIVGHQLLAGVAGDAHGERPLEAVVGVHPPDGSPRLAHRHPRP 523
Query: 355 RQLVLDFHQHDVAIVRHKLHQHGQVVGVAALLDVEHDL 242
R +L H VA+ L QH QV V AL VE DL
Sbjct: 524 RVGLLHVHLDHVAVHVLVLDQHRQVHRVGALHHVEVDL 637
Score = 39.6 bits (80), Expect(2) = 2e-037
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2 / -2
Query: 173 KLRHCGIMDVEFRRVRCKYP 232
KLRH GI+D++FRRV C +P
Sbjct: 703 KLRHSGIIDIQFRRVPCNFP 644
Score = 35.9 bits (72), Expect(2) = 2e-024
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3 / +3
Query: 231 GYLHRTLLNSTSMMPQWRS 175
G LH TLLN SMMP+WRS
Sbjct: 645 GKLHGTLLNWMSMMPEWRS 701
>gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B0810 5-PRIME, mRNA sequence
Length = 638
Score = 141 bits (302), Expect(2) = 2e-037
Identities = 53/80 (66%), Positives = 61/80 (76%)
Frame = +2 / +3
Query: 2 GKGCGSCYEVRCKEKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLR 181
GKGCGSCY++RC++ CSG TV ITDMNY P+APYHFDLSG AFG LAKPGLND+LR
Sbjct: 288 GKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAPYHFDLSGTAFGRLAKPGLNDRLR 467
Query: 182 HCGIMDVEFRRVRCKYPAGQ 241
H GI+D+EF R P Q
Sbjct: 468 HSGIIDIEFTRGAVGVPGAQ 527
Score = 111 bits (236), Expect(2) = 6e-028
Identities = 49/70 (70%), Positives = 54/70 (77%)
Frame = -3 / -2
Query: 210 LNSTSMMPQWRSLSLSPGFAREPKALPLKSKW*GAIGS*FMSVMNTVTGLPEHSGFSLHL 31
+NS SMMP+WRSLSLSPGFA P A+PL+SKW*GA G *FMSVM TV+ LPE LHL
Sbjct: 496 VNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMITVSVLPEQDWSFLHL 317
Query: 30 TS*HEPQPLP 1
*HEP PLP
Sbjct: 316 IL*HEPHPLP 287
Score = 34.5 bits (69), Expect(2) = 2e-037
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G KI FH+ + P Y AVLV DGD+V + + +
Sbjct: 520 GLKIGFHVXEYSXPVYFAVLVXXQDGDGDVVQVXLME 630
Score = 33.1 bits (66), Expect(2) = 6e-028
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -2 / -3
Query: 340 DFHQHDVAIVRHKLHQHGQVVGVAALLDVEHDLLP 236
+ H H VA+ HQH +V G L VE DL P
Sbjct: 624 EVHLHHVAVAVLXXHQHREVDGXRVLXHVEPDLEP 520
>gb|CV055940.1|CV055940 BNEL12B5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL12B5 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 614
Score = 95.9 bits (203), Expect(3) = 8e-037
Identities = 33/66 (50%), Positives = 50/66 (75%)
Frame = +2 / -2
Query: 353 SAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSESGKKVIAKDIIPANWRPDAVYTSNVQ 532
+ +W PMK SWG+IWRMD + GPFS+R+T+ESGK ++A +IP +W+P+ Y+S VQ
Sbjct: 358 TGQWVPMKESWGSIWRMDAHHPMHGPFSLRVTNESGKTLVADQVIPGDWKPNKTYSSLVQ 179
Query: 533 FY*TLN 550
F+* ++
Sbjct: 178 FH*LID 161
Score = 50.1 bits (103), Expect(3) = 8e-037
Identities = 17/30 (56%), Positives = 26/30 (86%)
Frame = +2 / -2
Query: 143 GSLAKPGLNDKLRHCGIMDVEFRRVRCKYP 232
G++AK G ND+LRH GI++++F+RV C+YP
Sbjct: 598 GAMAKYGRNDELRHAGIINMQFKRVPCQYP 509
Score = 46.0 bits (94), Expect(3) = 8e-037
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2 / -2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G + FH+E+G NP Y+A+LV++ DGD+ ++I +
Sbjct: 508 GLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIME 398
>gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL94h5 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 661
Score = 110 bits (234), Expect(3) = 1e-036
Identities = 40/64 (62%), Positives = 53/64 (82%)
Frame = +2 / +2
Query: 41 EKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVR 220
+ P CSG P TV ITDMNY+P++ YHFDLSG AFG++AK G ND+LRH GI++++F+RV
Sbjct: 308 DHPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVP 487
Query: 221 CKYP 232
C+YP
Sbjct: 488 CQYP 499
Score = 46.0 bits (94), Expect(3) = 1e-036
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2 / +2
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G + FH+E+G NP Y+A+LV++ DGD+ ++I +
Sbjct: 500 GLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIME 610
Score = 35.4 bits (71), Expect(3) = 1e-036
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRC 37
GKGCGSCY++RC
Sbjct: 262 GKGCGSCYQIRC 297
>gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. vulgare cDNA clone HA22I03
5-PRIME, mRNA sequence
Length = 597
Score = 110 bits (234), Expect(3) = 1e-036
Identities = 40/64 (62%), Positives = 53/64 (82%)
Frame = +2 / +1
Query: 41 EKPECSGNPVTVFITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVR 220
+ P CSG P TV ITDMNY+P++ YHFDLSG AFG++AK G ND+LRH GI++++F+RV
Sbjct: 262 DHPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVP 441
Query: 221 CKYP 232
C+YP
Sbjct: 442 CQYP 453
Score = 46.0 bits (94), Expect(3) = 1e-036
Identities = 15/37 (40%), Positives = 26/37 (70%)
Frame = +2 / +1
Query: 236 GQKIVFHIEKGCNPNYLAVLVKFVADDGDIVLMEIQD 346
G + FH+E+G NP Y+A+LV++ DGD+ ++I +
Sbjct: 454 GLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIME 564
Score = 35.4 bits (71), Expect(3) = 1e-036
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2 / +1
Query: 2 GKGCGSCYEVRC 37
GKGCGSCY++RC
Sbjct: 217 GKGCGSCYQIRC 252
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 433,391,508
Number of Sequences: 312970
Number of extensions: 8529836
Number of successful extensions: 144846
Number of sequences better than 1.0e-020: 160
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 8968096407
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)