TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161238.2.3
(672 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV931601.1|AV931601 AV931601 K. Sato unpublished cDNA li... 163 3e-059
gb|BJ458220.1|BJ458220 BJ458220 K. Sato unpublished cDNA li... 163 3e-059
gb|BF263615.1|BF263615 HV_CEa0007D10f Hordeum vulgare seedl... 204 1e-056
gb|BE559148.1|BE559148 HV_CEb0023K15f Hordeum vulgare seedl... 139 1e-056
gb|BJ447651.1|BJ447651 BJ447651 K. Sato unpublished cDNA li... 210 5e-054
gb|BJ455403.1|BJ455403 BJ455403 K. Sato unpublished cDNA li... 210 5e-054
gb|BF265478.2|BF265478 HV_CEa0012G06f Hordeum vulgare seedl... 196 1e-053
gb|BJ458244.1|BJ458244 BJ458244 K. Sato unpublished cDNA li... 163 3e-053
gb|BF260800.3|BF260800 HVSMEf0022P16f Hordeum vulgare seedl... 155 6e-052
gb|BQ768408.1|BQ768408 EBro08_SQ011_K13_R root, 3 week, dro... 157 1e-049
gb|CB876220.1|CB876220 HX10K07w HX Hordeum vulgare subsp. v... 131 9e-044
gb|BE216036.2|BE216036 HV_CEb0009D03f Hordeum vulgare seedl... 150 2e-040
gb|CA031549.1|CA031549 HX10F18r HX Hordeum vulgare subsp. v... 139 2e-039
gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. v... 115 1e-036
gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa... 115 3e-035
gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA... 115 3e-035
gb|BI780034.2|BI780034 EBma08_SQ001_D14_R maternal, 28 DPA,... 115 3e-035
gb|BG414755.1|BG414755 HVSMEk0003J19f Hordeum vulgare testa... 115 3e-035
gb|BQ466541.1|BQ466541 HT02N08r HT Hordeum vulgare subsp. v... 115 3e-035
gb|BI949025.1|BI949025 HVSMEl0012B07f Hordeum vulgare spike... 113 7e-035
gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 ... 115 1e-034
gb|CA012187.1|CA012187 HT04K16r HT Hordeum vulgare subsp. v... 115 6e-034
gb|BE602548.3|BE602548 HVSMEh0099N16f Hordeum vulgare 5-45 ... 113 9e-034
gb|BE454845.1|BE454845 HVSMEh0095E05f Hordeum vulgare 5-45 ... 109 2e-033
gb|BG417971.1|BG417971 HVSMEk0020F20f Hordeum vulgare testa... 109 2e-033
gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitin... 108 4e-033
gb|BQ466147.1|BQ466147 HT01L11T HT Hordeum vulgare subsp. v... 108 4e-033
gb|CA013166.1|CA013166 HT07J12r HT Hordeum vulgare subsp. v... 108 4e-033
gb|CA013604.1|CA013604 HT08P16r HT Hordeum vulgare subsp. v... 108 4e-033
gb|BQ465191.1|BQ465191 HU02O12r HU Hordeum vulgare subsp. v... 108 4e-033
emb|X15349.1|HVENDCHT Barley (H.vulgare) mRNA for endochiti... 108 4e-033
gb|BG417744.1|BG417744 HVSMEk0019F09f Hordeum vulgare testa... 110 8e-033
gb|BG301220.2|BG301220 HVSMEb0019P18f Hordeum vulgare seedl... 111 1e-032
gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DA... 115 3e-032
gb|CA022080.1|CA022080 HZ42B20r HZ Hordeum vulgare subsp. v... 106 3e-031
gb|AV926193.1|AV926193 AV926193 K. Sato unpublished cDNA li... 106 3e-031
gb|AV926184.1|AV926184 AV926184 K. Sato unpublished cDNA li... 106 3e-031
gb|BG365157.2|BG365157 HVSMEi0001I15f Hordeum vulgare 20 DA... 104 1e-030
gb|BM096890.2|BM096890 EBma08_SQ001_O17_R maternal, 28 DPA,... 99 2e-030
gb|BQ663496.1|BQ663496 HU02O12u HU Hordeum vulgare subsp. v... 98 6e-030
gb|CA016825.1|CA016825 HV05P04u HV Hordeum vulgare subsp. v... 98 6e-030
gb|BM371442.2|BM371442 EBma08_SQ002_M02_R maternal, 28 DPA,... 96 1e-029
gb|BG369358.2|BG369358 HVSMEi0024B14f Hordeum vulgare 20 DA... 115 3e-029
gb|CB876675.1|CB876675 HP02A05T HP Hordeum vulgare subsp. v... 110 2e-027
gb|AV931065.1|AV931065 AV931065 K. Sato unpublished cDNA li... 93 4e-027
gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DA... 115 1e-026
gb|BE519687.3|BE519687 HV_CEb0018G12f Hordeum vulgare seedl... 89 3e-026
gb|BI948372.1|BI948372 HVSMEl0009E13f Hordeum vulgare spike... 82 5e-026
gb|BJ448252.1|BJ448252 BJ448252 K. Sato unpublished cDNA li... 116 9e-026
gb|BJ455971.1|BJ455971 BJ455971 K. Sato unpublished cDNA li... 116 9e-026
gb|BE454366.3|BE454366 HVSMEh0093N17f Hordeum vulgare 5-45 ... 110 1e-025
gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa... 115 3e-025
gb|BG366386.2|BG366386 HVSMEi0006N24f Hordeum vulgare 20 DA... 115 3e-025
gb|BG369588.2|BG369588 HVSMEi0025B12f Hordeum vulgare 20 DA... 115 3e-025
gb|BG414551.2|BG414551 HVSMEk0002N14f Hordeum vulgare testa... 115 3e-025
gb|BM441867.2|BM441867 EBed07_SQ001_M10_R endosperm, 28 DPA... 115 3e-025
gb|BM371550.2|BM371550 EBma08_SQ003_C16_R maternal, 28 DPA,... 115 3e-025
gb|BM371924.2|BM371924 EBma08_SQ004_G15_R maternal, 28 DPA,... 115 3e-025
gb|CA014196.1|CA014196 HT10K16r HT Hordeum vulgare subsp. v... 115 3e-025
gb|CA012210.1|CA012210 HT04M11r HT Hordeum vulgare subsp. v... 108 5e-025
gb|BE602672.2|BE602672 HVSMEh0101A21f Hordeum vulgare 5-45 ... 68 1e-024
gb|BI780179.2|BI780179 EBma08_SQ001_K01_R maternal, 28 DPA,... 112 2e-024
gb|BG368852.1|BG368852 HVSMEi0020P03f Hordeum vulgare 20 DA... 108 2e-024
gb|BM444091.1|BM444091 EBem09_SQ004_C05_R embryo, 1 Day ger... 73 2e-024
gb|BM444155.1|BM444155 EBem09_SQ004_F06_R embryo, 1 Day ger... 73 2e-024
gb|BM444185.1|BM444185 EBem09_SQ004_G13_R embryo, 1 Day ger... 73 2e-024
gb|BI946904.1|BI946904 HVSMEl0002L21f Hordeum vulgare spike... 111 3e-024
gb|BE195244.3|BE195244 HVSMEh0088K24f Hordeum vulgare 5-45 ... 111 3e-024
gb|BE455238.3|BE455238 HVSMEh0096L08f Hordeum vulgare 5-45 ... 111 3e-024
gb|BJ464879.1|BJ464879 BJ464879 K. Sato unpublished cDNA li... 100 4e-024
gb|BU986660.1|BU986660 HF12I18r HF Hordeum vulgare subsp. v... 100 4e-024
gb|BU986619.1|BU986619 HF12G18r HF Hordeum vulgare subsp. v... 100 4e-024
gb|BF259800.2|BF259800 HVSMEf0020E19f Hordeum vulgare seedl... 111 5e-024
gb|BG365326.1|BG365326 HVSMEi0002E22f Hordeum vulgare 20 DA... 108 3e-023
gb|BG417280.2|BG417280 HVSMEk0017B12f Hordeum vulgare testa... 97 3e-023
gb|AJ461109.1|AJ461109 AJ461109 S00002 Hordeum vulgare subs... 68 3e-023
gb|AJ461110.1|AJ461110 AJ461110 S00002 Hordeum vulgare subs... 68 3e-023
gb|BI949464.1|BI949464 HVSMEl0014A17f Hordeum vulgare spike... 108 4e-023
gb|BG365857.2|BG365857 HVSMEi0004I09f Hordeum vulgare 20 DA... 108 4e-023
gb|CA018162.1|CA018162 HV07L16r HV Hordeum vulgare subsp. v... 108 4e-023
gb|CB879385.1|CB879385 HP02A05w HP Hordeum vulgare subsp. v... 78 4e-023
gb|BF631681.2|BF631681 HVSMEb0016O17f Hordeum vulgare seedl... 88 7e-023
gb|CA026694.1|CA026694 HZ56K16r HZ Hordeum vulgare subsp. v... 86 7e-023
gb|AV926194.1|AV926194 AV926194 K. Sato unpublished cDNA li... 106 8e-023
gb|BM372933.2|BM372933 EBma04_SQ002_H02_R maternal, 10 DPA,... 106 8e-023
gb|BE411224.1|BE411224 ISC003.D02F990524 ITEC ISC Barley Le... 106 1e-022
gb|BF064981.3|BF064981 HV_CEb0022E17f Hordeum vulgare seedl... 106 1e-022
gb|BJ449472.1|BJ449472 BJ449472 K. Sato unpublished cDNA li... 69 3e-022
gb|BJ459432.1|BJ459432 BJ459432 K. Sato unpublished cDNA li... 69 3e-022
gb|BG368854.1|BG368854 HVSMEi0020P07f Hordeum vulgare 20 DA... 105 3e-022
gb|BG365887.1|BG365887 HVSMEi0004K07f Hordeum vulgare 20 DA... 104 5e-022
gb|BE602137.3|BE602137 HVSMEh0102K15f Hordeum vulgare 5-45 ... 103 9e-022
gb|BI947731.1|BI947731 HVSMEl0006K11f Hordeum vulgare spike... 102 2e-021
gb|CA017694.1|CA017694 HV05P04r HV Hordeum vulgare subsp. v... 102 2e-021
emb|X78671.1|HVCHT2A H.vulgare mRNA for chitinase 2a 74 8e-021
emb|AJ276226.1|HVU276226 Hordeum vulgare mRNA for chitinase... 74 8e-021
gb|BI952125.1|BI952125 HVSMEm0004L07f Hordeum vulgare green... 74 8e-021
gb|BF065067.1|BF065067 HV_CEb0022N01f Hordeum vulgare seedl... 74 8e-021
gb|BJ546437.1|BJ546437 BJ546437 K. Sato unpublished cDNA li... 74 8e-021
gb|BE214283.1|BE214283 HV_CEb0003A01f Hordeum vulgare seedl... 74 8e-021
gb|BJ546657.1|BJ546657 BJ546657 K. Sato unpublished cDNA li... 74 8e-021
gb|BE214483.2|BE214483 HV_CEb0003J11f Hordeum vulgare seedl... 74 8e-021
gb|AV911582.1|AV911582 AV911582 K. Sato unpublished cDNA li... 74 8e-021
gb|BJ544721.1|BJ544721 BJ544721 K. Sato unpublished cDNA li... 74 8e-021
gb|BJ456780.1|BJ456780 BJ456780 K. Sato unpublished cDNA li... 74 8e-021
gb|AV908961.1|AV908961 AV908961 K. Sato unpublished cDNA li... 74 8e-021
gb|AV928645.1|AV928645 AV928645 K. Sato unpublished cDNA li... 74 8e-021
gb|BJ546197.1|BJ546197 BJ546197 K. Sato unpublished cDNA li... 74 8e-021
gb|BJ449314.1|BJ449314 BJ449314 K. Sato unpublished cDNA li... 74 8e-021
gb|BJ544774.1|BJ544774 BJ544774 K. Sato unpublished cDNA li... 74 8e-021
gb|BJ546165.1|BJ546165 BJ546165 K. Sato unpublished cDNA li... 74 8e-021
>gb|AV931601.1|AV931601 AV931601 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23h02 3', mRNA sequence
Length = 633
Score = 163 bits (350), Expect(3) = 3e-059
Identities = 59/95 (62%), Positives = 73/95 (76%)
Frame = -3 / -2
Query: 610 YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTA 431
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+ +GF+GL +P +VAQD +AFK A
Sbjct: 569 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAA 390
Query: 430 LWFWMNNVHRVMPQGFGATIRAINGALECNGNNPA 326
LWFWMNNV +V+P+GFGAT RAIN GN+ A
Sbjct: 389 LWFWMNNVKQVLPRGFGATTRAINSGECNGGNSAA 285
Score = 113 bits (242), Expect(3) = 4e-035
Identities = 53/88 (60%), Positives = 56/88 (63%)
Frame = +3 / +1
Query: 327 AGLFPLHSRAPLMALMVAPKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSL 506
A FP L+AL+VAP P G T TLFIQNQSA LNA + SCAT G SP P
Sbjct: 286 AAEFPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLF 465
Query: 507 PAGP*L*FHEICSGPRP*YFCPAAHGHC 590
PA P*L*FH CSGPRP*Y P HGHC
Sbjct: 466 PAAP*L*FHVSCSGPRP*YPFPEVHGHC 549
Score = 65.7 bits (137), Expect(3) = 3e-059
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3 / -2
Query: 349 ECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 245
ECNG N A MNAR GYY+ YCQQ VDPG +LTC*
Sbjct: 311 ECNGGNSAAMNARGGYYRAYCQQFGVDPGNSLTC* 207
Score = 47.8 bits (98), Expect(3) = 4e-035
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +3 / +1
Query: 246 *QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHS 350
*QVRL PGST +CWQ **P RAF+ A PLHS
Sbjct: 208 *QVRLFPGSTPNCWQ*AR**PPRAFMAAEFPPLHS 312
Score = 38.6 bits (78), Expect(3) = 3e-059
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -3 / -2
Query: 670 HVTHETGHFCYISEI 626
HVTHETGH CYI EI
Sbjct: 632 HVTHETGHMCYIEEI 588
Score = 24.4 bits (47), Expect(3) = 4e-035
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 636 M*QKCPVSCVT 668
M* CPVSCVT
Sbjct: 598 M*HMCPVSCVT 630
>gb|BJ458220.1|BJ458220 BJ458220 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31c19 3', mRNA sequence
Length = 537
Score = 163 bits (350), Expect(3) = 3e-059
Identities = 59/95 (62%), Positives = 73/95 (76%)
Frame = -3 / -2
Query: 610 YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTA 431
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+ +GF+GL +P +VAQD +AFK A
Sbjct: 425 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAA 246
Query: 430 LWFWMNNVHRVMPQGFGATIRAINGALECNGNNPA 326
LWFWMNNV +V+P+GFGAT RAIN GN+ A
Sbjct: 245 LWFWMNNVKQVLPRGFGATTRAINSGECNGGNSAA 141
Score = 113 bits (242), Expect(3) = 1e-034
Identities = 53/88 (60%), Positives = 56/88 (63%)
Frame = +3 / +1
Query: 327 AGLFPLHSRAPLMALMVAPKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSL 506
A FP L+AL+VAP P G T TLFIQNQSA LNA + SCAT G SP P
Sbjct: 142 AAEFPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLF 321
Query: 507 PAGP*L*FHEICSGPRP*YFCPAAHGHC 590
PA P*L*FH CSGPRP*Y P HGHC
Sbjct: 322 PAAP*L*FHVSCSGPRP*YPFPEVHGHC 405
Score = 65.2 bits (136), Expect(3) = 3e-059
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -3 / -2
Query: 349 ECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 245
ECNG N A MNAR GYY+ YC+Q VDPG +LTC*
Sbjct: 167 ECNGGNSAAMNARAGYYRAYCKQFGVDPGNSLTC* 63
Score = 42.3 bits (86), Expect(3) = 1e-034
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = +3 / +1
Query: 246 *QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHS 350
*QVRL PGST +C Q **P RAF+ A PLHS
Sbjct: 64 *QVRLFPGSTPNCLQ*AR**PARAFMAAEFPPLHS 168
Score = 38.6 bits (78), Expect(3) = 3e-059
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -3 / -2
Query: 670 HVTHETGHFCYISEI 626
HVTHETGH CYI EI
Sbjct: 488 HVTHETGHMCYIEEI 444
Score = 28.6 bits (56), Expect(3) = 1e-034
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 636 M*QKCPVSCVTC 671
M* CPVSCVTC
Sbjct: 454 M*HMCPVSCVTC 489
>gb|BF263615.1|BF263615 HV_CEa0007D10f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007D10f, mRNA sequence
Length = 617
Score = 204 bits (440), Expect(2) = 1e-056
Identities = 73/120 (60%), Positives = 91/120 (75%)
Frame = -3 / +2
Query: 604 DASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALW 425
D+++ +WPC +G+ YYGRGPLQ++WNYNYG AG + FNGL +P VAQD + F+ A W
Sbjct: 212 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGEKLKFNGLDNPEAVAQDPALTFQAAFW 391
Query: 424 FWMNNVHRVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 245
FWM NVH+V+PQGFGAT AING +EC+G P +NAR GYY YC+Q VDPG NLTC*
Sbjct: 392 FWMTNVHQVLPQGFGATTSAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNLTC* 571
Score = 148 bits (318), Expect(2) = 1e-036
Identities = 69/114 (60%), Positives = 76/114 (66%)
Frame = +3 / -3
Query: 246 *QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHSRAPLMALMVAPKPCGITRCTLFIQN 425
*QVRL PGST +C Q +**P RAF +G P HS PL+AL+VAP PCG T CTL IQN
Sbjct: 570 *QVRLFPGSTPNCLQ*SM**PARAFTKSGFLPSHST*PLIALVVAPNPCGRTWCTLVIQN 391
Query: 426 QSAVLNAITASCATLLGSASPLKPMSLPAGP*L*FHEICSGPRP*YFCPAAHGH 587
Q+A N SCAT G +SPL PA P*L*FH CSGPRP*Y P HGH
Sbjct: 390 QNAAWNVNAGSCATASGLSSPLNLSFSPAAP*L*FHVSCSGPRP*YPFPEVHGH 229
Score = 35.4 bits (71), Expect(2) = 1e-056
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / +2
Query: 670 HVTHETGHFCYISEIN 623
HVT ETGH CYI EI+
Sbjct: 131 HVTQETGHMCYIEEID 178
Score = 24.4 bits (47), Expect(2) = 1e-036
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / -3
Query: 636 M*QKCPVSCVT 668
M* CPVSCVT
Sbjct: 165 M*HMCPVSCVT 133
>gb|BE559148.1|BE559148 HV_CEb0023K15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023K15f, mRNA sequence
Length = 551
Score = 139 bits (299), Expect(2) = 1e-056
Identities = 49/80 (61%), Positives = 62/80 (77%)
Frame = -3 / -3
Query: 619 SNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAF 440
S YCD +N +WPC AG+ YYGRGPLQ SWNYNYG AG+ +GF+GL DP+ VA+ V+AF
Sbjct: 480 SKNYCDPTNTEWPCVAGKGYYGRGPLQFSWNYNYGAAGQSLGFDGLNDPDAVARSPVLAF 301
Query: 439 KTALWFWMNNVHRVMPQGFG 380
+ ALW+WMN+VH V+ G G
Sbjct: 300 QAALWYWMNSVHDVIVSGQG 241
Score = 100 bits (212), Expect(2) = 1e-056
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -3 / -3
Query: 400 VMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC*A 242
V QGFGATIRAINGALECNG NP +N RV YYKQ+CQQ VDPG +LTC*A
Sbjct: 255 VSGQGFGATIRAINGALECNGKNPTAVNDRVAYYKQFCQQFGVDPGTSLTC*A 97
Score = 91.3 bits (193), Expect(2) = 4e-036
Identities = 44/69 (63%), Positives = 45/69 (65%)
Frame = +3 / +2
Query: 381 PKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSLPAGP*L*FHEICSGPRP* 560
P P +T CTLFIQ QSA NA T AT GS SP KP PA P*L*FHE CSGPRP*
Sbjct: 242 PWPETMTSCTLFIQYQSAAWNAKTGLRATASGSLSPSKPRLCPAAP*L*FHENCSGPRP* 421
Query: 561 YFCPAAHGH 587
PA HGH
Sbjct: 422 *PFPATHGH 448
Score = 79.9 bits (168), Expect(2) = 4e-036
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +3 / +2
Query: 243 A*QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHSRAPLMALMVAPKP 389
A*QVRL PGST +CWQ CL** TR+ G PLHS APLMALMVAP P
Sbjct: 98 A*QVRLVPGSTPNCWQNCL**ATRSLTAVGFLPLHSSAPLMALMVAPNP 244
>gb|BJ447651.1|BJ447651 BJ447651 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak16l19 5', mRNA sequence
Length = 532
Score = 210 bits (454), Expect = 5e-054
Identities = 75/120 (62%), Positives = 93/120 (77%)
Frame = -3 / +3
Query: 604 DASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALW 425
D+++ +WPC +G+ YYGRGPLQ++WNYNYG AG +GFNGL +P VAQD + F+ A W
Sbjct: 21 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGEKLGFNGLDNPETVAQDPALTFQAAFW 200
Query: 424 FWMNNVHRVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 245
FWM NVH+V+PQGFGAT RAING +EC+G P +NAR GYY YC+Q VDPG NLTC*
Sbjct: 201 FWMTNVHQVLPQGFGATTRAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNLTC* 380
Score = 154 bits (330), Expect = 6e-037
Identities = 70/114 (61%), Positives = 78/114 (68%)
Frame = +3 / -1
Query: 246 *QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHSRAPLMALMVAPKPCGITRCTLFIQN 425
*QVRL PGST +C Q +**P RAF +G P HS PL+AL+VAP PCG T CTL IQN
Sbjct: 379 *QVRLFPGSTPNCLQ*SM**PARAFTKSGFLPSHST*PLIALVVAPNPCGRTWCTLVIQN 200
Query: 426 QSAVLNAITASCATLLGSASPLKPMSLPAGP*L*FHEICSGPRP*YFCPAAHGH 587
Q+A N SCAT+ G +SPL P PA P*L*FH CSGPRP*Y P HGH
Sbjct: 199 QNAAWNVNAGSCATVSGLSSPLNPSFSPAAP*L*FHVSCSGPRP*YPFPEVHGH 38
>gb|BJ455403.1|BJ455403 BJ455403 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak16l19 3', mRNA sequence
Length = 505
Score = 210 bits (454), Expect = 5e-054
Identities = 75/120 (62%), Positives = 93/120 (77%)
Frame = -3 / -1
Query: 604 DASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALW 425
D+++ +WPC +G+ YYGRGPLQ++WNYNYG AG +GFNGL +P VAQD + F+ A W
Sbjct: 484 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGEKLGFNGLDNPETVAQDPALTFQAAFW 305
Query: 424 FWMNNVHRVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 245
FWM NVH+V+PQGFGAT RAING +EC+G P +NAR GYY YC+Q VDPG NLTC*
Sbjct: 304 FWMTNVHQVLPQGFGATTRAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNLTC* 125
Score = 154 bits (330), Expect = 6e-037
Identities = 70/114 (61%), Positives = 78/114 (68%)
Frame = +3 / +3
Query: 246 *QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHSRAPLMALMVAPKPCGITRCTLFIQN 425
*QVRL PGST +C Q +**P RAF +G P HS PL+AL+VAP PCG T CTL IQN
Sbjct: 126 *QVRLFPGSTPNCLQ*SM**PARAFTKSGFLPSHST*PLIALVVAPNPCGRTWCTLVIQN 305
Query: 426 QSAVLNAITASCATLLGSASPLKPMSLPAGP*L*FHEICSGPRP*YFCPAAHGH 587
Q+A N SCAT+ G +SPL P PA P*L*FH CSGPRP*Y P HGH
Sbjct: 306 QNAAWNVNAGSCATVSGLSSPLNPSFSPAAP*L*FHVSCSGPRP*YPFPEVHGH 467
>gb|BF265478.2|BF265478 HV_CEa0012G06f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0012G06f, mRNA sequence
Length = 767
Score = 196 bits (423), Expect(2) = 1e-053
Identities = 72/120 (60%), Positives = 90/120 (75%)
Frame = -3 / -1
Query: 604 DASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALW 425
D+++ + PC + + YYGRGPLQ++WNYNYG AG + FNGL +P VAQD + F+ A W
Sbjct: 512 DSNHPE*PCTSRKGYYGRGPLQLTWNYNYGAAGEKLKFNGLDNPEAVAQDPALTFQAAFW 333
Query: 424 FWMNNVHRVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 245
FWM NVH+V+PQGFGAT RAING +EC+G P +NAR GYY YC+Q VDPG NLTC*
Sbjct: 332 FWMTNVHQVLPQGFGATTRAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNLTC* 153
Score = 144 bits (309), Expect = 5e-034
Identities = 68/114 (59%), Positives = 75/114 (65%)
Frame = +3 / +1
Query: 246 *QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHSRAPLMALMVAPKPCGITRCTLFIQN 425
*QVRL PGST +C Q +**P RAF +G P HS PL+AL+VAP PCG T CTL IQN
Sbjct: 154 *QVRLFPGSTPNCLQ*SM**PARAFTKSGFLPSHST*PLIALVVAPNPCGRTWCTLVIQN 333
Query: 426 QSAVLNAITASCATLLGSASPLKPMSLPAGP*L*FHEICSGPRP*YFCPAAHGH 587
Q+A N SCAT G +SPL PA P*L*FH CSGPRP*Y HGH
Sbjct: 334 QNAAWNVNAGSCATASGLSSPLNLSFSPAAP*L*FHVSCSGPRP*YPFREVHGH 495
Score = 33.6 bits (67), Expect(2) = 1e-053
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 670 HVTHETGHFCYISEIN 623
HVT +TGH CYI EI+
Sbjct: 593 HVTQKTGHMCYIEEID 546
>gb|BJ458244.1|BJ458244 BJ458244 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31e07 3', mRNA sequence
Length = 536
Score = 163 bits (350), Expect(2) = 3e-053
Identities = 59/95 (62%), Positives = 73/95 (76%)
Frame = -3 / -1
Query: 610 YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTA 431
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+ +GF+GL +P +VAQD +AFK A
Sbjct: 509 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAA 330
Query: 430 LWFWMNNVHRVMPQGFGATIRAINGALECNGNNPA 326
LWFWMNNV +V+P+GFGAT RAIN GN+ A
Sbjct: 329 LWFWMNNVKQVLPRGFGATTRAINSGECNGGNSAA 225
Score = 113 bits (242), Expect(2) = 1e-031
Identities = 53/88 (60%), Positives = 56/88 (63%)
Frame = +3 / +1
Query: 327 AGLFPLHSRAPLMALMVAPKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSL 506
A FP L+AL+VAP P G T TLFIQNQSA LNA + SCAT G SP P
Sbjct: 226 AAEFPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLF 405
Query: 507 PAGP*L*FHEICSGPRP*YFCPAAHGHC 590
PA P*L*FH CSGPRP*Y P HGHC
Sbjct: 406 PAAP*L*FHVSCSGPRP*YPXPEVHGHC 489
Score = 65.2 bits (136), Expect(2) = 3e-053
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -3 / -1
Query: 349 ECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 245
ECNG N A MNAR GYY+ YC+Q VDPG +LTC*
Sbjct: 251 ECNGGNSAAMNARAGYYRAYCKQFGVDPGNSLTC* 147
Score = 42.3 bits (86), Expect(2) = 1e-031
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = +3 / +1
Query: 246 *QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHS 350
*QVRL PGST +C Q **P RAF+ A PLHS
Sbjct: 148 *QVRLFPGSTPNCLQ*AR**PARAFMAAEFPPLHS 252
>gb|BF260800.3|BF260800 HVSMEf0022P16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022P16f, mRNA sequence
Length = 725
Score = 155 bits (334), Expect(3) = 6e-052
Identities = 55/84 (65%), Positives = 65/84 (77%)
Frame = -3 / +1
Query: 610 YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTA 431
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+ +GF+GL P VA D +AFK A
Sbjct: 340 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNTPENVAHDPEVAFKAA 519
Query: 430 LWFWMNNVHRVMPQGFGATIRAIN 359
LWFWMNNV V+P+GFGAT RAIN
Sbjct: 520 LWFWMNNVKHVLPRGFGATTRAIN 591
Score = 113 bits (241), Expect(3) = 2e-029
Identities = 52/85 (61%), Positives = 55/85 (64%)
Frame = +3 / -1
Query: 336 FPLHSRAPLMALMVAPKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSLPAG 515
FP L+AL+VAP P G T TLFIQNQSA LNA + SCAT G SP P PA
Sbjct: 614 FPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGVLSPSNPTLFPAA 435
Query: 516 P*L*FHEICSGPRP*YFCPAAHGHC 590
P*L*FH CSGPRP*Y P HGHC
Sbjct: 434 P*L*FHVSCSGPRP*YPFPEVHGHC 360
Score = 48.3 bits (99), Expect(3) = 6e-052
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = -3 / +2
Query: 355 ALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 245
A N MNAR GYY+ YC+Q +PG +LTC*
Sbjct: 593 AASATAGNSXXMNARAGYYRAYCKQFGFNPGNSLTC* 703
Score = 38.6 bits (78), Expect(3) = 6e-052
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -3 / +1
Query: 670 HVTHETGHFCYISEI 626
HVTHETGH CYI EI
Sbjct: 277 HVTHETGHMCYIEEI 321
Score = 28.6 bits (56), Expect(3) = 2e-029
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +3 / -3
Query: 246 *QVRLGPGSTRSCWQYCL**PTRAFI 323
*QVRL PG +C Q **P RAF+
Sbjct: 702 *QVRLFPGLKPNCLQ*AR**PARAFM 625
Score = 24.4 bits (47), Expect(3) = 2e-029
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / -1
Query: 636 M*QKCPVSCVT 668
M* CPVSCVT
Sbjct: 311 M*HMCPVSCVT 279
>gb|BQ768408.1|BQ768408 EBro08_SQ011_K13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_K13 5', mRNA sequence
Length = 403
Score = 157 bits (337), Expect(2) = 1e-049
Identities = 57/93 (61%), Positives = 73/93 (78%)
Frame = -3 / +2
Query: 604 DASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALW 425
D S+ +WPC +G+ YYGRGPLQ++WNYNYG AG+ +GF+GL +P +VAQD +AFK ALW
Sbjct: 5 DRSHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAALW 184
Query: 424 FWMNNVHRVMPQGFGATIRAINGALECNGNNPA 326
FWMNNV +V+P+GFGAT RAIN GN+ A
Sbjct: 185 FWMNNVKQVLPRGFGATTRAINSGECNGGNSAA 283
Score = 109 bits (233), Expect(2) = 5e-026
Identities = 52/87 (59%), Positives = 55/87 (63%)
Frame = +3 / -2
Query: 327 AGLFPLHSRAPLMALMVAPKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSL 506
A FP L+AL+VAP P G T TLFIQNQSA LNA + SCAT G SP P
Sbjct: 282 AAEFPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLF 103
Query: 507 PAGP*L*FHEICSGPRP*YFCPAAHGH 587
PA P*L*FH CSGPRP*Y P HGH
Sbjct: 102 PAAP*L*FHVSCSGPRP*YPFPEVHGH 22
Score = 59.3 bits (123), Expect(2) = 1e-049
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = -3 / +2
Query: 349 ECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 245
ECNG N A MNAR YY+ YC++ VDPG LTC*
Sbjct: 257 ECNGGNSAAMNARARYYRAYCKKFGVDPGHRLTC* 361
Score = 27.6 bits (54), Expect(2) = 5e-026
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +3 / -2
Query: 246 *QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHS 350
*QV L PGST + Q * RAF+ A PLHS
Sbjct: 360 *QVSLCPGSTPNFLQ*AR*YLARAFMAAEFPPLHS 256
>gb|CB876220.1|CB876220 HX10K07w HX Hordeum vulgare subsp. vulgare cDNA clone HX10K07
3-PRIME, mRNA sequence
Length = 576
Score = 131 bits (280), Expect(2) = 9e-044
Identities = 49/77 (63%), Positives = 61/77 (79%)
Frame = -3 / -2
Query: 556 GRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMNNVHRVMPQGFGA 377
GRGPLQ++WNYNYG AG+ +GF+GL +P +VAQD +AFK ALWFWMNNV +V+P+GFGA
Sbjct: 575 GRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAALWFWMNNVKQVLPRGFGA 396
Query: 376 TIRAINGALECNGNNPA 326
T RAIN GN+ A
Sbjct: 395 TTRAINSGECNGGNSAA 345
Score = 95.9 bits (203), Expect(2) = 6e-028
Identities = 46/77 (59%), Positives = 49/77 (63%)
Frame = +3 / +1
Query: 327 AGLFPLHSRAPLMALMVAPKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSL 506
A FP L+AL+VAP P G T TLFIQNQSA LNA + SCAT G SP P
Sbjct: 346 AAEFPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLF 525
Query: 507 PAGP*L*FHEICSGPRP 557
PA P*L*FH CSGPRP
Sbjct: 526 PAAP*L*FHVSCSGPRP 576
Score = 65.7 bits (137), Expect(2) = 9e-044
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = -3 / -2
Query: 349 ECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC* 245
ECNG N A MNAR GYY+ YCQQ VDPG +LTC*
Sbjct: 371 ECNGGNSAAMNARGGYYRAYCQQFGVDPGNSLTC* 267
Score = 47.8 bits (98), Expect(2) = 6e-028
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +3 / +1
Query: 246 *QVRLGPGSTRSCWQYCL**PTRAFIWAGLFPLHS 350
*QVRL PGST +CWQ **P RAF+ A PLHS
Sbjct: 268 *QVRLFPGSTPNCWQ*AR**PPRAFMAAEFPPLHS 372
>gb|BE216036.2|BE216036 HV_CEb0009D03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009D03f, mRNA sequence
Length = 557
Score = 150 bits (322), Expect(2) = 2e-040
Identities = 52/83 (62%), Positives = 66/83 (79%)
Frame = -3 / +1
Query: 604 DASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALW 425
D+++ +WPC +G+ YYGRGPLQ++WNYNYG AG + FNGL +P VAQD + F+ A W
Sbjct: 307 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGEKLKFNGLDNPEAVAQDPALTFQAAFW 486
Query: 424 FWMNNVHRVMPQGFGATIRAING 356
FWM NVH+V+PQGFGAT RAING
Sbjct: 487 FWMTNVHQVLPQGFGATTRAING 555
Score = 109 bits (233), Expect(2) = 5e-025
Identities = 48/77 (62%), Positives = 52/77 (67%)
Frame = +3 / -1
Query: 357 PLMALMVAPKPCGITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSLPAGP*L*FHE 536
PL+AL+VAP PCG T CTL IQNQ+A N SCAT G +SPL PA P*L*FH
Sbjct: 554 PLIALVVAPNPCGRTWCTLVIQNQNAAWNVNAGSCATASGLSSPLNLSFSPAAP*L*FHV 375
Query: 537 ICSGPRP*YFCPAAHGH 587
CSGPRP*Y P HGH
Sbjct: 374 SCSGPRP*YPFPEVHGH 324
Score = 35.4 bits (71), Expect(2) = 2e-040
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / +1
Query: 670 HVTHETGHFCYISEIN 623
HVT ETGH CYI EI+
Sbjct: 226 HVTQETGHMCYIEEID 273
Score = 24.4 bits (47), Expect(2) = 5e-025
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / -1
Query: 636 M*QKCPVSCVT 668
M* CPVSCVT
Sbjct: 260 M*HMCPVSCVT 228
>gb|CA031549.1|CA031549 HX10F18r HX Hordeum vulgare subsp. vulgare cDNA clone HX10F18
5-PRIME, mRNA sequence
Length = 613
Score = 139 bits (299), Expect(3) = 2e-039
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = -3 / +1
Query: 610 YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTA 431
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+ +GF+GL +P +VAQD +AFK A
Sbjct: 334 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAA 513
Query: 430 LWFWMNNVHRVMPQ 389
LWFWMNNV +V+P+
Sbjct: 514 LWFWMNNVKQVLPR 555
Score = 97.7 bits (207), Expect(2) = 2e-021
Identities = 43/66 (65%), Positives = 44/66 (66%)
Frame = +3 / -3
Query: 393 GITRCTLFIQNQSAVLNAITASCATLLGSASPLKPMSLPAGP*L*FHEICSGPRP*YFCP 572
G T TLFIQNQSA LNA + SCAT G SP P PA P*L*FH CSGPRP*Y P
Sbjct: 551 GRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLFPAAP*L*FHVSCSGPRP*YPFP 372
Query: 573 AAHGHC 590
HGHC
Sbjct: 371 EVHGHC 354
Score = 38.6 bits (78), Expect(3) = 2e-039
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -3 / +1
Query: 670 HVTHETGHFCYISEI 626
HVTHETGH CYI EI
Sbjct: 271 HVTHETGHMCYIEEI 315
Score = 24.4 bits (47), Expect(2) = 2e-021
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / -3
Query: 636 M*QKCPVSCVT 668
M* CPVSCVT
Sbjct: 305 M*HMCPVSCVT 273
Score = 22.1 bits (42), Expect(3) = 2e-039
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3 / +2
Query: 385 FGATIRAINGALECNGNN 332
FGAT RAIN GN+
Sbjct: 560 FGATTRAINSGECNGGNS 613
>gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. vulgare cDNA clone HT01C02
5-PRIME, mRNA sequence
Length = 642
Score = 115 bits (245), Expect(3) = 1e-036
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +1
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 73 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 246
Score = 53.3 bits (110), Expect(3) = 1e-036
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3 / +1
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG ING +EC +++ R+G+YK+YC L V G NL C
Sbjct: 337 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 477
Score = 22.6 bits (43), Expect(3) = 1e-036
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3 / +1
Query: 661 HETGHFCYISEINKSNAYCDAS 596
HE +C+ E S+ YC S
Sbjct: 4 HEAWGYCFKQERGASSDYCTPS 69
>gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005I16f, mRNA sequence
Length = 908
Score = 115 bits (245), Expect(2) = 3e-035
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +2
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 158 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 331
Score = 53.3 bits (110), Expect(2) = 3e-035
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3 / +2
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG ING +EC +++ R+G+YK+YC L V G NL C
Sbjct: 422 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 562
>gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ003_N15 5', mRNA sequence
Length = 688
Score = 115 bits (245), Expect(2) = 3e-035
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +1
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 208 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 381
Score = 53.3 bits (110), Expect(2) = 3e-035
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3 / +1
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG ING +EC +++ R+G+YK+YC L V G NL C
Sbjct: 472 GFGVITNIINGGIECGRGQDSRVADRIGFYKRYCDILGVGYGNNLDC 612
>gb|BI780034.2|BI780034 EBma08_SQ001_D14_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_D14 5', mRNA sequence
Length = 647
Score = 115 bits (245), Expect(2) = 3e-035
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +1
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 88 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 261
Score = 53.3 bits (110), Expect(2) = 3e-035
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3 / +1
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG ING +EC +++ R+G+YK+YC L V G NL C
Sbjct: 352 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 492
>gb|BG414755.1|BG414755 HVSMEk0003J19f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003J19f, mRNA sequence
Length = 625
Score = 115 bits (245), Expect(2) = 3e-035
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +1
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 34 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 207
Score = 53.3 bits (110), Expect(2) = 3e-035
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3 / +1
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG ING +EC +++ R+G+YK+YC L V G NL C
Sbjct: 298 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 438
>gb|BQ466541.1|BQ466541 HT02N08r HT Hordeum vulgare subsp. vulgare cDNA clone HT02N08
5-PRIME, mRNA sequence
Length = 536
Score = 115 bits (245), Expect(2) = 3e-035
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +2
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 83 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 256
Score = 53.3 bits (110), Expect(2) = 3e-035
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3 / +2
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG ING +EC +++ R+G+YK+YC L V G NL C
Sbjct: 347 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 487
>gb|BI949025.1|BI949025 HVSMEl0012B07f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0012B07f, mRNA sequence
Length = 854
Score = 113 bits (242), Expect(2) = 7e-035
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = -3 / +3
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG LA+P+ VA DA +AFKTA+WFWM
Sbjct: 54 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGGELLANPDLVATDATVAFKTAIWFWM 227
Score = 53.3 bits (110), Expect(2) = 7e-035
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = -3 / +3
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG ING +EC +++ RVG+YK+YC L V G NL C
Sbjct: 318 GFGVITNIINGGIECGHGQDSRVADRVGFYKRYCDILGVGYGNNLHC 458
>gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094A02f, mRNA sequence
Length = 688
Score = 115 bits (245), Expect(2) = 1e-034
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +3
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 78 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 251
Score = 51.5 bits (106), Expect(2) = 1e-034
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -3 / +3
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG ING +EC +++ R+G+YK+YC L V G +L C
Sbjct: 342 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGKHLDC 482
>gb|CA012187.1|CA012187 HT04K16r HT Hordeum vulgare subsp. vulgare cDNA clone HT04K16
5-PRIME, mRNA sequence
Length = 447
Score = 115 bits (245), Expect(3) = 6e-034
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +1
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 73 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 246
Score = 44.1 bits (90), Expect(3) = 6e-034
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3 / +1
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQL 278
GFG ING +EC +++ R+G+YK+YC L
Sbjct: 337 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDIL 447
Score = 22.6 bits (43), Expect(3) = 6e-034
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -3 / +1
Query: 661 HETGHFCYISEINKSNAYCDAS 596
HE +C+ E S+ YC S
Sbjct: 4 HEAWGYCFKQERGASSDYCTPS 69
>gb|BE602548.3|BE602548 HVSMEh0099N16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099N16f, mRNA sequence
Length = 730
Score = 113 bits (241), Expect(2) = 9e-034
Identities = 39/58 (67%), Positives = 48/58 (82%)
Frame = -3 / +1
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPC G++YYGRGP+ +SWNYNYGPAGR IG + L +P+ VA DA ++FKTALWFWM
Sbjct: 127 QWPCVQGRQYYGRGPIMLSWNYNYGPAGRAIGVDLLNNPDLVATDATVSFKTALWFWM 300
Score = 50.1 bits (103), Expect(2) = 9e-034
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -3 / +1
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
G+G ING LEC +++ R+G+Y++YC L V G NL C
Sbjct: 391 GYGVITNIINGGLECGRGADSRVADRIGFYQRYCNILDVGYGGNLDC 531
>gb|BE454845.1|BE454845 HVSMEh0095E05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095E05f, mRNA sequence
Length = 717
Score = 109 bits (232), Expect(2) = 2e-033
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = -3 / -2
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G++YYGRGP+++S NYN GPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 581 QWPCAPGKRYYGRGPIKLSHNYNNGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 408
Score = 53.3 bits (110), Expect(2) = 2e-033
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3 / -2
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG ING +EC +++ R+G+YK+YC L V G NL C
Sbjct: 317 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 177
>gb|BG417971.1|BG417971 HVSMEk0020F20f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0020F20f, mRNA sequence
Length = 468
Score = 109 bits (232), Expect(2) = 2e-033
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = -3 / +1
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G++YYGR P Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 25 QWPCAPGKRYYGRRPNQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 198
Score = 53.3 bits (110), Expect(2) = 2e-033
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3 / +1
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG ING +EC +++ R+G+YK+YC L V G NL C
Sbjct: 289 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 429
>gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitinase gene, complete cds
Length = 1684
Score = 108 bits (230), Expect(2) = 4e-033
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / +3
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G+ YYGRGP+Q+S NYNYGPAGR IG + L +P+ VA D ++FKTA+WFWM
Sbjct: 1128 QWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 1301
Score = 52.8 bits (109), Expect(2) = 4e-033
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -3 / +3
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG +NG +EC +++ R+G+YK+YC L V G NL C
Sbjct: 1392 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 1532
>gb|BQ466147.1|BQ466147 HT01L11T HT Hordeum vulgare subsp. vulgare cDNA clone HT01L11
5-PRIME, mRNA sequence
Length = 673
Score = 108 bits (230), Expect(2) = 4e-033
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / +3
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G+ YYGRGP+Q+S NYNYGPAGR IG + L +P+ VA D ++FKTA+WFWM
Sbjct: 141 QWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 314
Score = 52.8 bits (109), Expect(2) = 4e-033
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -3 / +3
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG +NG +EC +++ R+G+YK+YC L V G NL C
Sbjct: 405 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 545
>gb|CA013166.1|CA013166 HT07J12r HT Hordeum vulgare subsp. vulgare cDNA clone HT07J12
5-PRIME, mRNA sequence
Length = 639
Score = 108 bits (230), Expect(2) = 4e-033
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / +3
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G+ YYGRGP+Q+S NYNYGPAGR IG + L +P+ VA D ++FKTA+WFWM
Sbjct: 183 QWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 356
Score = 52.8 bits (109), Expect(2) = 4e-033
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -3 / +3
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG +NG +EC +++ R+G+YK+YC L V G NL C
Sbjct: 447 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 587
>gb|CA013604.1|CA013604 HT08P16r HT Hordeum vulgare subsp. vulgare cDNA clone HT08P16
5-PRIME, mRNA sequence
Length = 633
Score = 108 bits (230), Expect(2) = 4e-033
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / +1
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G+ YYGRGP+Q+S NYNYGPAGR IG + L +P+ VA D ++FKTA+WFWM
Sbjct: 79 QWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 252
Score = 52.8 bits (109), Expect(2) = 4e-033
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -3 / +1
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG +NG +EC +++ R+G+YK+YC L V G NL C
Sbjct: 343 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 483
>gb|BQ465191.1|BQ465191 HU02O12r HU Hordeum vulgare subsp. vulgare cDNA clone HU02O12
5-PRIME, mRNA sequence
Length = 580
Score = 108 bits (230), Expect(2) = 4e-033
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / +3
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G+ YYGRGP+Q+S NYNYGPAGR IG + L +P+ VA D ++FKTA+WFWM
Sbjct: 27 QWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 200
Score = 52.8 bits (109), Expect(2) = 4e-033
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -3 / +3
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG +NG +EC +++ R+G+YK+YC L V G NL C
Sbjct: 291 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 431
>emb|X15349.1|HVENDCHT Barley (H.vulgare) mRNA for endochitinase
Length = 556
Score = 108 bits (230), Expect(2) = 4e-033
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3 / +1
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G+ YYGRGP+Q+S NYNYGPAGR IG + L +P+ VA D ++FKTA+WFWM
Sbjct: 109 QWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 282
Score = 52.8 bits (109), Expect(2) = 4e-033
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -3 / +1
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG +NG +EC +++ R+G+YK+YC L V G NL C
Sbjct: 373 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 513
>gb|BG417744.1|BG417744 HVSMEk0019F09f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0019F09f, mRNA sequence
Length = 436
Score = 110 bits (235), Expect(2) = 8e-033
Identities = 40/58 (68%), Positives = 49/58 (84%)
Frame = -3 / +3
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QW CA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 36 QWACAPGKRYYGRGPIQLSNNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 209
Score = 49.6 bits (102), Expect(2) = 8e-033
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = -3 / +3
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNL 254
GFG ING +EC +++ R+G+YK+YC L V G NL
Sbjct: 300 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNL 434
>gb|BG301220.2|BG301220 HVSMEb0019P18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019P18f, mRNA sequence
Length = 713
Score = 111 bits (237), Expect(2) = 1e-032
Identities = 38/58 (65%), Positives = 51/58 (87%)
Frame = -3 / +1
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
+WPCA G++YYGRGP+Q+S+NYNYGPAGR +G + L++P+ VA D V++FKTALWFWM
Sbjct: 70 EWPCAPGRRYYGRGPMQLSFNYNYGPAGRALGVDLLSNPDLVATDPVLSFKTALWFWM 243
Score = 48.3 bits (99), Expect(2) = 1e-032
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
G+G ING LEC + ++ R+G+YK+YC L V NL C
Sbjct: 334 GYGVITNIINGGLECGRGHDPRVVDRIGFYKRYCDVLGVGY*SNLDC 474
>gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003B22f, mRNA sequence
Length = 805
Score = 115 bits (245), Expect(2) = 3e-032
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +3
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 342 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 515
Score = 43.2 bits (88), Expect(2) = 3e-032
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -3 / +3
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG ING +EC +++ R+G YK+ L V G NL C
Sbjct: 606 GFGVITNIINGGIECGHGQDSRVADRIGLYKRC*DMLGVGYGDNLDC 746
>gb|CA022080.1|CA022080 HZ42B20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42B20
5-PRIME, mRNA sequence
Length = 598
Score = 106 bits (226), Expect(2) = 3e-031
Identities = 37/57 (64%), Positives = 47/57 (82%)
Frame = -3 / +3
Query: 586 WPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
WPCA G++YYGRGP+Q++ NYNYGPAGR IG + L +P+ VA D +AFKTA+WFWM
Sbjct: 168 WPCAPGKQYYGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWM 338
Score = 48.3 bits (99), Expect(2) = 3e-031
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -3 / +3
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
G+G ING +EC ++ R+G+YK+YC + G NL C
Sbjct: 429 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDC 569
>gb|AV926193.1|AV926193 AV926193 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18h03 5', mRNA sequence
Length = 511
Score = 106 bits (226), Expect(2) = 3e-031
Identities = 37/57 (64%), Positives = 47/57 (82%)
Frame = -3 / +2
Query: 586 WPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
WPCA G++YYGRGP+Q++ NYNYGPAGR IG + L +P+ VA D +AFKTA+WFWM
Sbjct: 101 WPCAPGKQYYGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWM 271
Score = 48.3 bits (99), Expect(2) = 3e-031
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -3 / +2
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
G+G ING +EC ++ R+G+YK+YC + G NL C
Sbjct: 362 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDC 502
>gb|AV926184.1|AV926184 AV926184 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18g16 5', mRNA sequence
Length = 507
Score = 106 bits (226), Expect(2) = 3e-031
Identities = 37/57 (64%), Positives = 47/57 (82%)
Frame = -3 / +3
Query: 586 WPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
WPCA G++YYGRGP+Q++ NYNYGPAGR IG + L +P+ VA D +AFKTA+WFWM
Sbjct: 102 WPCAPGKQYYGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWM 272
Score = 48.3 bits (99), Expect(2) = 3e-031
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -3 / +3
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
G+G ING +EC ++ R+G+YK+YC + G NL C
Sbjct: 363 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDC 503
>gb|BG365157.2|BG365157 HVSMEi0001I15f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0001I15f, mRNA sequence
Length = 937
Score = 104 bits (221), Expect(2) = 1e-030
Identities = 37/58 (63%), Positives = 46/58 (79%)
Frame = -3 / +1
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G+ YY RGP+Q+S NYNYGPAGR IG + L +P+ VA D ++FKTA+WFWM
Sbjct: 103 QWPCAPGKSYYCRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 276
Score = 48.7 bits (100), Expect(2) = 1e-030
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -3 / +1
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG +NG +EC +++ R+G+YK+YC L V NL C
Sbjct: 367 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYCNNLDC 507
>gb|BM096890.2|BM096890 EBma08_SQ001_O17_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_O17 5', mRNA sequence
Length = 486
Score = 99.1 bits (210), Expect(2) = 2e-030
Identities = 36/52 (69%), Positives = 45/52 (86%)
Frame = -3 / +1
Query: 571 GQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 1 GKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 156
Score = 53.3 bits (110), Expect(2) = 2e-030
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3 / +1
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG ING +EC +++ R+G+YK+YC L V G NL C
Sbjct: 247 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 387
>gb|BQ663496.1|BQ663496 HU02O12u HU Hordeum vulgare subsp. vulgare cDNA clone HU02O12
3-PRIME, mRNA sequence
Length = 546
Score = 97.7 bits (207), Expect(2) = 6e-030
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = -3 / -2
Query: 580 CAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
CA G+ YYGRGP+Q+S NYNYGPAGR IG + L +P+ VA D ++FKTA+WFWM
Sbjct: 545 CAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 381
Score = 52.8 bits (109), Expect(2) = 6e-030
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -3 / -2
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG +NG +EC +++ R+G+YK+YC L V G NL C
Sbjct: 290 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 150
>gb|CA016825.1|CA016825 HV05P04u HV Hordeum vulgare subsp. vulgare cDNA clone HV05P04
3-PRIME, mRNA sequence
Length = 545
Score = 97.7 bits (207), Expect(2) = 6e-030
Identities = 35/55 (63%), Positives = 44/55 (80%)
Frame = -3 / -2
Query: 580 CAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
CA G+ YYGRGP+Q+S NYNYGPAGR IG + L +P+ VA D ++FKTA+WFWM
Sbjct: 544 CAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 380
Score = 52.8 bits (109), Expect(2) = 6e-030
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -3 / -2
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG +NG +EC +++ R+G+YK+YC L V G NL C
Sbjct: 289 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 149
>gb|BM371442.2|BM371442 EBma08_SQ002_M02_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_M02 5', mRNA sequence
Length = 548
Score = 96.4 bits (204), Expect(2) = 1e-029
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = -3 / +3
Query: 568 QKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 3 KRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 155
Score = 53.3 bits (110), Expect(2) = 1e-029
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3 / +3
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG ING +EC +++ R+G+YK+YC L V G NL C
Sbjct: 246 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 386
>gb|BG369358.2|BG369358 HVSMEi0024B14f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024B14f, mRNA sequence
Length = 904
Score = 115 bits (245), Expect(2) = 3e-029
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +3
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 78 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 251
Score = 33.1 bits (66), Expect(2) = 3e-029
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3 / +3
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
GFG ING +EC +++ R+ Y++ L G NL C
Sbjct: 342 GFGVITNIINGGIECGHGQDSRVADRIRGYRRC*DMLGGGCGGNLGC 482
>gb|CB876675.1|CB876675 HP02A05T HP Hordeum vulgare subsp. vulgare cDNA clone HP02A05
5-PRIME, mRNA sequence
Length = 639
Score = 110 bits (234), Expect(2) = 2e-027
Identities = 38/58 (65%), Positives = 48/58 (82%)
Frame = -3 / +1
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
+WPCA G+KYYGRGP+Q+SWNYNYG AGR IG + L +P+ VA DA ++FK ALWFW+
Sbjct: 271 EWPCAPGKKYYGRGPMQLSWNYNYGQAGRAIGVDLLNNPDLVATDATVSFKAALWFWV 444
Score = 31.8 bits (63), Expect(2) = 2e-027
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3 / +1
Query: 385 FGATIRAINGALECNGNNPAQMNARVGYYKQYC 287
+G I G EC + R+G+YK+YC
Sbjct: 538 YGVITNIIYGGRECGKGQNPDVVDRIGFYKRYC 636
>gb|AV931065.1|AV931065 AV931065 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18g16 3', mRNA sequence
Length = 650
Score = 92.7 bits (196), Expect(2) = 4e-027
Identities = 33/52 (63%), Positives = 43/52 (82%)
Frame = -3 / -2
Query: 571 GQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
G++YYGRGP+Q++ NYNYGPAGR IG + L +P+ VA D +AFKTA+WFWM
Sbjct: 649 GKQYYGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWM 494
Score = 48.3 bits (99), Expect(2) = 4e-027
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -3 / -2
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
G+G ING +EC ++ R+G+YK+YC + G NL C
Sbjct: 403 GYGVITNVINGGIECGKGQNDKVADRIGFYKRYCDIFGIGYGNNLDC 263
>gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003I02f, mRNA sequence
Length = 741
Score = 115 bits (245), Expect(2) = 1e-026
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = -3 / +3
Query: 589 QWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
QWPCA G++YYGRGP+Q+S NYNYGPAGR IG + LA+P+ VA DA +AFKTA+WFWM
Sbjct: 426 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 599
Score = 24.4 bits (47), Expect(2) = 1e-026
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3 / +3
Query: 388 GFGATIRAINGALEC 344
GFG ING +EC
Sbjct: 690 GFGVITNIINGGIEC 734
>gb|BE519687.3|BE519687 HV_CEb0018G12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0018G12f, mRNA sequence
Length = 523
Score = 88.6 bits (187), Expect(3) = 3e-026
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -3 / +2
Query: 610 YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADP 473
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+ +G++GL P
Sbjct: 104 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGYDGLNKP 241
Score = 38.6 bits (78), Expect(3) = 3e-026
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -3 / +2
Query: 670 HVTHETGHFCYISEI 626
HVTHETGH CYI EI
Sbjct: 41 HVTHETGHMCYIEEI 85
Score = 28.6 bits (56), Expect(3) = 3e-026
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -2 / +2
Query: 443 VQDGALVLDEQRAPCDAAGL 384
VQ GALVLDEQR AG+
Sbjct: 272 VQGGALVLDEQRGTRPDAGM 331
>gb|BI948372.1|BI948372 HVSMEl0009E13f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0009E13f, mRNA sequence
Length = 617
Score = 81.7 bits (172), Expect(2) = 5e-026
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = -3 / +1
Query: 556 GRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 416
GRGP+QIS NYNYGPAGR I + L +P+ VA DA ++FKTALWFWM
Sbjct: 1 GRGPIQISHNYNYGPAGRAICADLLNNPDLVATDATVSFKTALWFWM 141
Score = 55.6 bits (115), Expect(2) = 5e-026
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = -3 / +1
Query: 388 GFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 248
G+G ING LEC A++ R+G+YK+YC L V G NL C
Sbjct: 232 GYGVITNIINGGLECGRGQDARVADRIGFYKRYCDLLGVSYGDNLDC 372
>gb|BJ448252.1|BJ448252 BJ448252 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak19d09 5', mRNA sequence
Length = 360
Score = 116 bits (249), Expect = 9e-026
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = -3 / +3
Query: 433 ALWFWMNNVHRVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNL 254
A WFWM NVH+V+PQGFGAT RAING +EC+G P +NAR GYY YC+Q VDPG NL
Sbjct: 3 AFWFWMTNVHQVLPQGFGATTRAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNL 182
Query: 253 TC* 245
TC*
Sbjct: 183 TC* 191
>gb|BJ455971.1|BJ455971 BJ455971 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak19d09 3', mRNA sequence
Length = 340
Score = 116 bits (249), Expect = 9e-026
Identities = 43/63 (68%), Positives = 49/63 (77%)
Frame = -3 / -3
Query: 433 ALWFWMNNVHRVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNL 254
A WFWM NVH+V+PQGFGAT RAING +EC+G P +NAR GYY YC+Q VDPG NL
Sbjct: 338 AFWFWMTNVHQVLPQGFGATTRAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNL 159
Query: 253 TC* 245
TC*
Sbjct: 158 TC* 150
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 218,393,725
Number of Sequences: 312970
Number of extensions: 3088876
Number of successful extensions: 69194
Number of sequences better than 1.0e-020: 148
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 7295673948
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)