TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161072.2.3
(885 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenyl... 193 8e-079
gb|BF265916.1|BF265916 HV_CEa0013K19f Hordeum vulgare seedl... 193 8e-079
gb|BQ765924.1|BQ765924 EBro03_SQ008_E16_R root, 3 week, wat... 193 8e-079
gb|BQ763878.1|BQ763878 EBro03_SQ005_L15_R root, 3 week, wat... 193 8e-079
gb|BI956808.1|BI956808 HVSMEn0005G21f Hordeum vulgare rachi... 187 9e-074
gb|BG365997.1|BG365997 HVSMEi0004M09f Hordeum vulgare 20 DA... 187 6e-073
gb|BQ469057.1|BQ469057 HM03D09r HM Hordeum vulgare subsp. v... 164 4e-070
gb|BG414191.1|BG414191 HVSMEk0001A07f Hordeum vulgare testa... 193 2e-067
gb|BI956268.1|BI956268 HVSMEn0001M16f Hordeum vulgare rachi... 188 2e-066
gb|BF628845.2|BF628845 HVSMEb0008N10f Hordeum vulgare seedl... 151 3e-066
gb|BI959849.1|BI959849 HVSMEn0022A20f Hordeum vulgare rachi... 196 2e-064
gb|AV917458.1|AV917458 AV917458 K. Sato unpublished cDNA li... 193 7e-062
gb|BM816193.1|BM816193 HC109D04_T3.ab1 HC Hordeum vulgare s... 99 6e-060
gb|BI959802.1|BI959802 HVSMEn0021J20f Hordeum vulgare rachi... 154 2e-059
gb|AL505275.1|AL505275 AL505275 Hordeum vulgare Barke roots... 127 2e-057
gb|BE214612.2|BE214612 HV_CEb0003P13f Hordeum vulgare seedl... 121 4e-057
gb|BF261029.2|BF261029 HVSMEf0023J05f Hordeum vulgare seedl... 118 2e-056
gb|BQ768801.1|BQ768801 EBro08_SQ012_P15_R root, 3 week, dro... 150 2e-056
gb|AV928635.1|AV928635 AV928635 K. Sato unpublished cDNA li... 193 8e-055
gb|AV931028.1|AV931028 AV931028 K. Sato unpublished cDNA li... 193 8e-055
gb|CB882049.1|CB882049 HM11L11w HM Hordeum vulgare subsp. v... 137 2e-054
gb|BU990224.1|BU990224 HF24H03r HF Hordeum vulgare subsp. v... 137 2e-054
emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenyl... 149 3e-054
gb|BQ767013.1|BQ767013 EBro08_SQ007_A24_R root, 3 week, dro... 151 9e-053
gb|CB881918.1|CB881918 HM11E17w HM Hordeum vulgare subsp. v... 127 2e-052
gb|AV931810.1|AV931810 AV931810 K. Sato unpublished cDNA li... 193 3e-052
gb|AV928004.1|AV928004 AV928004 K. Sato unpublished cDNA li... 193 4e-052
gb|BI778700.2|BI778700 EBro01_SQ001_C06_R root, 3 week, hyd... 125 5e-051
gb|AL503927.1|AL503927 AL503927 Hordeum vulgare Barke roots... 113 7e-051
gb|BG310118.1|BG310118 HVSMEc0016N14f Hordeum vulgare seedl... 137 1e-050
gb|AV919005.1|AV919005 AV919005 K. Sato unpublished cDNA li... 193 2e-050
gb|BJ467713.1|BJ467713 BJ467713 K. Sato unpublished cDNA li... 122 6e-050
gb|BQ767217.1|BQ767217 EBro08_SQ008_E10_R root, 3 week, dro... 149 1e-049
gb|BU989823.1|BU989823 HF22M18r HF Hordeum vulgare subsp. v... 137 5e-049
gb|BU990169.1|BU990169 HF24E14r HF Hordeum vulgare subsp. v... 137 5e-049
gb|BF264601.3|BF264601 HV_CEa0009N21f Hordeum vulgare seedl... 144 5e-048
gb|CB880955.1|CB880955 HM08F11w HM Hordeum vulgare subsp. v... 191 6e-048
gb|AV921319.1|AV921319 AV921319 K. Sato unpublished cDNA li... 154 1e-047
gb|BQ765219.1|BQ765219 EBro03_SQ006_F15_R root, 3 week, wat... 144 4e-047
gb|BQ768383.1|BQ768383 EBro08_SQ011_F13_R root, 3 week, dro... 137 8e-047
gb|AV919053.1|AV919053 AV919053 K. Sato unpublished cDNA li... 145 1e-046
gb|AV931809.1|AV931809 AV931809 K. Sato unpublished cDNA li... 186 1e-046
gb|AV930308.1|AV930308 AV930308 K. Sato unpublished cDNA li... 184 5e-046
gb|AV912724.1|AV912724 AV912724 K. Sato unpublished cDNA li... 99 6e-046
gb|BI959376.1|BI959376 HVSMEn0019H01f Hordeum vulgare rachi... 183 9e-046
gb|AV930975.1|AV930975 AV930975 K. Sato unpublished cDNA li... 182 2e-045
gb|BQ765192.1|BQ765192 EBro03_SQ006_A15_R root, 3 week, wat... 144 4e-045
gb|BM372199.2|BM372199 EBro03_SQ004_E20_R root, 3 week, wat... 156 1e-044
gb|BI957553.1|BI957553 HVSMEn0010B19f Hordeum vulgare rachi... 99 1e-044
gb|AL505417.1|AL505417 AL505417 Hordeum vulgare Barke roots... 99 2e-044
gb|AV926975.1|AV926975 AV926975 K. Sato unpublished cDNA li... 99 4e-044
gb|BI957512.1|BI957512 HVSMEn0009P04f Hordeum vulgare rachi... 99 8e-044
gb|BM370557.2|BM370557 EBro08_SQ004_J10_R root, 3 week, dro... 153 2e-042
gb|BJ468382.1|BJ468382 BJ468382 K. Sato unpublished cDNA li... 154 2e-041
gb|AV919026.1|AV919026 AV919026 K. Sato unpublished cDNA li... 149 3e-041
gb|BI959811.1|BI959811 HVSMEn0021K21f Hordeum vulgare rachi... 99 6e-041
gb|AV927824.1|AV927824 AV927824 K. Sato unpublished cDNA li... 77 8e-041
gb|AV928876.1|AV928876 AV928876 K. Sato unpublished cDNA li... 147 1e-040
gb|BI777236.2|BI777236 EBro03_SQ002_I15_R root, 3 week, wat... 131 3e-040
gb|AV931622.1|AV931622 AV931622 K. Sato unpublished cDNA li... 165 3e-040
gb|BE438184.1|BE438184 SFR010.H12F990722 ITEC SFR Barley Le... 145 5e-040
gb|BE421683.1|BE421683 HWM012cG.10r ITEC HWM Barley Leaf Li... 161 5e-039
gb|AV918830.1|AV918830 AV918830 K. Sato unpublished cDNA li... 137 2e-038
gb|AL501348.1|AL501348 AL501348 Hordeum vulgare Barke roots... 156 2e-038
gb|AL501346.1|AL501346 AL501346 Hordeum vulgare Barke roots... 156 3e-038
gb|AL502685.1|AL502685 AL502685 Hordeum vulgare Barke roots... 156 3e-038
gb|AL501349.1|AL501349 AL501349 Hordeum vulgare Barke roots... 156 3e-038
gb|BJ452093.1|BJ452093 BJ452093 K. Sato unpublished cDNA li... 156 1e-037
gb|BJ465265.1|BJ465265 BJ465265 K. Sato unpublished cDNA li... 156 1e-037
gb|BJ468508.1|BJ468508 BJ468508 K. Sato unpublished cDNA li... 156 1e-037
gb|BI960030.1|BI960030 HVSMEn0022P01f Hordeum vulgare rachi... 99 2e-037
gb|AL501350.1|AL501350 AL501350 Hordeum vulgare Barke roots... 151 8e-037
gb|BI958293.1|BI958293 HVSMEn0014E11f Hordeum vulgare rachi... 97 2e-036
gb|BF259754.3|BF259754 HVSMEf0020C19f Hordeum vulgare seedl... 149 3e-036
gb|BU968202.1|BU968202 HB06L24r BC Hordeum vulgare subsp. v... 151 6e-036
gb|AV921618.1|AV921618 AV921618 K. Sato unpublished cDNA li... 150 8e-036
gb|AV928881.1|AV928881 AV928881 K. Sato unpublished cDNA li... 150 8e-036
gb|AL501352.1|AL501352 AL501352 Hordeum vulgare Barke roots... 149 3e-035
gb|BJ466939.1|BJ466939 BJ466939 K. Sato unpublished cDNA li... 149 3e-035
gb|BQ468898.1|BQ468898 HM02L09r HM Hordeum vulgare subsp. v... 149 3e-035
gb|BE214036.1|BE214036 HV_CEb0001P14f Hordeum vulgare seedl... 72 7e-035
gb|BI959619.1|BI959619 HVSMEn0020H03f Hordeum vulgare rachi... 99 1e-034
gb|BQ664513.1|BQ664513 HV03K13u HV Hordeum vulgare subsp. v... 146 1e-034
gb|BI959878.1|BI959878 HVSMEn0022D03f Hordeum vulgare rachi... 113 2e-034
gb|AL502072.1|AL502072 AL502072 Hordeum vulgare Barke roots... 142 3e-034
gb|BQ765396.1|BQ765396 EBro03_SQ007_E05_R root, 3 week, wat... 145 3e-034
gb|BI959574.1|BI959574 HVSMEn0020E07f Hordeum vulgare rachi... 144 7e-034
gb|AV918666.1|AV918666 AV918666 K. Sato unpublished cDNA li... 144 7e-034
gb|BJ459164.1|BJ459164 BJ459164 K. Sato unpublished cDNA li... 144 7e-034
gb|BI947758.1|BI947758 HVSMEl0006M12f Hordeum vulgare spike... 144 9e-034
gb|BQ762717.1|BQ762717 EBro02_SQ004_I20_R root, 3 week, hyd... 144 9e-034
gb|BQ661371.1|BQ661371 HM03D09u HM Hordeum vulgare subsp. v... 142 2e-033
gb|AV926974.1|AV926974 AV926974 K. Sato unpublished cDNA li... 99 2e-032
gb|BE437808.1|BE437808 SFR007.G02F990625 ITEC SFR Barley Le... 138 4e-032
gb|BE437962.1|BE437962 SFR009.D04F990512 ITEC SFR Barley Le... 138 4e-032
gb|BF258018.2|BF258018 HVSMEf0014I06f Hordeum vulgare seedl... 110 7e-032
gb|AV923115.1|AV923115 AV923115 K. Sato unpublished cDNA li... 99 9e-032
gb|AL503163.1|AL503163 AL503163 Hordeum vulgare Barke roots... 137 1e-031
gb|BQ756566.1|BQ756566 EBem09_SQ003_B12_R embryo, 1 Day ger... 137 1e-031
gb|AL502364.1|AL502364 AL502364 Hordeum vulgare Barke roots... 130 1e-030
gb|BF265906.3|BF265906 HV_CEa0013K09f Hordeum vulgare seedl... 90 1e-030
gb|BU988288.1|BU988288 HF17D09r HF Hordeum vulgare subsp. v... 99 1e-030
gb|BE558376.3|BE558376 HV_CEb0017H01f Hordeum vulgare seedl... 128 4e-030
gb|BI959468.1|BI959468 HVSMEn0019M15f Hordeum vulgare rachi... 99 5e-030
gb|BG415885.2|BG415885 HVSMEk0008K04f Hordeum vulgare testa... 129 2e-029
gb|BI958535.1|BI958535 HVSMEn0015H19f Hordeum vulgare rachi... 98 2e-029
gb|AL500991.1|AL500991 AL500991 Hordeum vulgare Barke roots... 128 4e-029
gb|AL501962.1|AL501962 AL501962 Hordeum vulgare Barke roots... 126 2e-028
gb|BQ662656.1|BQ662656 HS03H24u HS Hordeum vulgare subsp. v... 126 2e-028
gb|CB858981.1|CB858981 HI08O15w HI Hordeum vulgare subsp. v... 123 1e-027
gb|BQ766648.1|BQ766648 EBro08_SQ006_A20_R root, 3 week, dro... 72 3e-027
gb|BQ661267.1|BQ661267 HM02L09u HM Hordeum vulgare subsp. v... 122 4e-027
gb|CA016735.1|CA016735 HV06I16u HV Hordeum vulgare subsp. v... 119 3e-026
gb|BQ760542.1|BQ760542 EBro03_SQ001_F05_R root, 3 week, wat... 118 3e-026
gb|BI957636.1|BI957636 HVSMEn0010H09f Hordeum vulgare rachi... 99 5e-026
gb|BM372206.2|BM372206 EBro03_SQ004_F04_R root, 3 week, wat... 99 5e-026
gb|BI957141.1|BI957141 HVSMEn0007L14f Hordeum vulgare rachi... 70 5e-025
gb|AJ427587.1|AJ427587 AJ427587 Hordeum vulgare subsp. vulg... 70 7e-025
gb|BI955715.1|BI955715 HVSMEm0024C22f Hordeum vulgare green... 113 1e-024
gb|AV925745.1|AV925745 AV925745 K. Sato unpublished cDNA li... 99 2e-024
gb|AJ462386.1|AJ462386 AJ462386 S00002 Hordeum vulgare subs... 110 1e-023
gb|AL501291.1|AL501291 AL501291 Hordeum vulgare Barke roots... 110 1e-023
gb|AV913531.1|AV913531 AV913531 K. Sato unpublished cDNA li... 72 1e-023
gb|BQ765456.1|BQ765456 EBro03_SQ007_P05_R root, 3 week, wat... 109 2e-023
gb|BQ767318.1|BQ767318 EBro08_SQ008_F18_R root, 3 week, dro... 72 2e-023
gb|BM816192.1|BM816192 HC110D06_T3.ab1 HC Hordeum vulgare s... 97 3e-023
gb|AL501309.1|AL501309 AL501309 Hordeum vulgare Barke roots... 85 2e-022
gb|AL502617.1|AL502617 AL502617 Hordeum vulgare Barke roots... 99 3e-022
gb|BF254228.2|BF254228 HVSMEf0003G02f Hordeum vulgare seedl... 88 5e-022
gb|BE438019.1|BE438019 SFR010.A02F990628 ITEC SFR Barley Le... 104 7e-022
gb|AL502555.1|AL502555 AL502555 Hordeum vulgare Barke roots... 100 1e-021
gb|BM443256.2|BM443256 EBro02_SQ003_E13_R root, 3 week, hyd... 71 2e-021
>emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831 bp)
Length = 1831
Score = 193 bits (417), Expect(3) = 8e-079
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +3 / +3
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 1161 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 1340
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 1341 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 1493
Score = 151 bits (325), Expect(3) = 3e-057
Identities = 70/110 (63%), Positives = 73/110 (66%)
Frame = -3 / -1
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 1489 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 1310
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 1309 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 1160
Score = 118 bits (252), Expect(3) = 2e-036
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / +2
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 1310 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 1489
Score = 99.1 bits (210), Expect(3) = 8e-079
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +2 / +3
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KN VTQV+KKVLTMNP+GDLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 951 KNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 1106
Score = 66.6 bits (139), Expect(3) = 3e-057
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -1 / -1
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVF 4
+NTASRSMA M FSLKRALERSP GFMVSTF T VT F
Sbjct: 1072 LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVTQF 953
Score = 56.5 bits (117), Expect(4) = 7e-023
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -3 / -3
Query: 148 GAGRVLRVREHGLAVDGGDELLLAEARAGEV 56
GA V+ V EHGLAVDGGDE LLAEARAGEV
Sbjct: 1097 GAACVVGVAEHGLAVDGGDEALLAEARAGEV 1005
Score = 56.5 bits (117), Expect(4) = 7e-023
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -2 / -3
Query: 539 DVDGQRLAVPLLEALEHGVDELALAD 462
DVDGQ LAVPLLEALEHGVDEL LAD
Sbjct: 1493 DVDGQGLAVPLLEALEHGVDELVLAD 1416
Score = 47.3 bits (97), Expect(3) = 2e-036
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1 / +2
Query: 1 QEHGDPGGQEGADHEPLGGPLQRALQREGAH 93
+E D G +EGADHEP PLQRALQRE H
Sbjct: 950 EELRDAGVEEGADHEPYRRPLQRALQREEPH 1042
Score = 42.8 bits (87), Expect(3) = 3e-057
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -1
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 1171 SASPGPAVRAWSTSTARSFCIS 1106
Score = 40.5 bits (82), Expect(3) = 8e-079
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 1107 LMQKLRAVLVDHALTAGPGEAE 1172
Score = 35.0 bits (70), Expect(4) = 7e-023
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2 / -3
Query: 209 AAAEGVVHQHGAQFLHQ 159
A +GVVH+HGAQ LHQ
Sbjct: 1157 AGGQGVVHEHGAQLLHQ 1107
Score = 31.8 bits (63), Expect(3) = 2e-036
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 1108 *CRSCAPCSWTT 1143
Score = 22.1 bits (42), Expect(4) = 7e-023
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1 / -1
Query: 861 KKKLIT*DVVHPKIQQ 814
KKK + ++HPKIQ+
Sbjct: 1750 KKKPRSISIIHPKIQR 1703
>gb|BF265916.1|BF265916 HV_CEa0013K19f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013K19f, mRNA sequence
Length = 773
Score = 193 bits (417), Expect(3) = 8e-079
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +3 / +1
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 292 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 471
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 472 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 624
Score = 151 bits (325), Expect(3) = 3e-057
Identities = 70/110 (63%), Positives = 73/110 (66%)
Frame = -3 / -1
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 620 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 441
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 440 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 291
Score = 118 bits (252), Expect(3) = 3e-037
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / +3
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 441 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 620
Score = 99.1 bits (210), Expect(3) = 8e-079
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KN VTQV+KKVLTMNP+GDLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 82 KNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 237
Score = 66.6 bits (139), Expect(3) = 3e-057
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -1 / -1
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVF 4
+NTASRSMA M FSLKRALERSP GFMVSTF T VT F
Sbjct: 203 LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVTQF 84
Score = 56.5 bits (117), Expect(3) = 1e-022
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -3 / -3
Query: 148 GAGRVLRVREHGLAVDGGDELLLAEARAGEV 56
GA V+ V EHGLAVDGGDE LLAEARAGEV
Sbjct: 228 GAACVVGVAEHGLAVDGGDEALLAEARAGEV 136
Score = 56.5 bits (117), Expect(3) = 1e-022
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -2 / -3
Query: 539 DVDGQRLAVPLLEALEHGVDELALAD 462
DVDGQ LAVPLLEALEHGVDEL LAD
Sbjct: 624 DVDGQGLAVPLLEALEHGVDELVLAD 547
Score = 47.3 bits (97), Expect(3) = 3e-037
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1 / +3
Query: 1 QEHGDPGGQEGADHEPLGGPLQRALQREGAH 93
+E D G +EGADHEP PLQRALQRE H
Sbjct: 81 EELRDAGVEEGADHEPYRRPLQRALQREEPH 173
Score = 42.8 bits (87), Expect(3) = 3e-057
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -1
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 302 SASPGPAVRAWSTSTARSFCIS 237
Score = 40.5 bits (82), Expect(3) = 8e-079
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 238 LMQKLRAVLVDHALTAGPGEAE 303
Score = 35.0 bits (70), Expect(3) = 1e-022
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2 / -3
Query: 209 AAAEGVVHQHGAQFLHQ 159
A +GVVH+HGAQ LHQ
Sbjct: 288 AGGQGVVHEHGAQLLHQ 238
Score = 31.8 bits (63), Expect(3) = 3e-037
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 239 *CRSCAPCSWTT 274
>gb|BQ765924.1|BQ765924 EBro03_SQ008_E16_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_E16 5', mRNA sequence
Length = 625
Score = 193 bits (417), Expect(3) = 8e-079
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +3 / +2
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 269 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 448
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 449 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 601
Score = 151 bits (325), Expect(3) = 3e-057
Identities = 70/110 (63%), Positives = 73/110 (66%)
Frame = -3 / -2
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 597 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 418
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 417 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 268
Score = 118 bits (252), Expect(3) = 2e-037
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / +1
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 418 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 597
Score = 99.1 bits (210), Expect(3) = 8e-079
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +2 / +2
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KN VTQV+KKVLTMNP+GDLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 59 KNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 214
Score = 66.6 bits (139), Expect(3) = 3e-057
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -1 / -2
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVF 4
+NTASRSMA M FSLKRALERSP GFMVSTF T VT F
Sbjct: 180 LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVTQF 61
Score = 56.5 bits (117), Expect(3) = 7e-023
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -3 / -1
Query: 148 GAGRVLRVREHGLAVDGGDELLLAEARAGEV 56
GA V+ V EHGLAVDGGDE LLAEARAGEV
Sbjct: 205 GAACVVGVAEHGLAVDGGDEALLAEARAGEV 113
Score = 56.5 bits (117), Expect(3) = 7e-023
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -2 / -1
Query: 539 DVDGQRLAVPLLEALEHGVDELALAD 462
DVDGQ LAVPLLEALEHGVDEL LAD
Sbjct: 601 DVDGQGLAVPLLEALEHGVDELVLAD 524
Score = 47.3 bits (97), Expect(3) = 2e-037
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1 / +1
Query: 1 QEHGDPGGQEGADHEPLGGPLQRALQREGAH 93
+E D G +EGADHEP PLQRALQRE H
Sbjct: 58 EELRDAGVEEGADHEPYRRPLQRALQREEPH 150
Score = 42.8 bits (87), Expect(3) = 3e-057
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -2
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 279 SASPGPAVRAWSTSTARSFCIS 214
Score = 40.5 bits (82), Expect(3) = 8e-079
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 215 LMQKLRAVLVDHALTAGPGEAE 280
Score = 35.0 bits (70), Expect(3) = 7e-023
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2 / -1
Query: 209 AAAEGVVHQHGAQFLHQ 159
A +GVVH+HGAQ LHQ
Sbjct: 265 AGGQGVVHEHGAQLLHQ 215
Score = 31.8 bits (63), Expect(3) = 2e-037
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 216 *CRSCAPCSWTT 251
>gb|BQ763878.1|BQ763878 EBro03_SQ005_L15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_L15 5', mRNA sequence
Length = 615
Score = 193 bits (417), Expect(3) = 8e-079
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +3 / +2
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 257 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 436
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 437 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 589
Score = 151 bits (325), Expect(3) = 3e-057
Identities = 70/110 (63%), Positives = 73/110 (66%)
Frame = -3 / -1
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 585 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 406
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 405 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 256
Score = 118 bits (252), Expect(3) = 2e-037
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / +1
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 406 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 585
Score = 99.1 bits (210), Expect(3) = 8e-079
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +2 / +2
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KN VTQV+KKVLTMNP+GDLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 47 KNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 202
Score = 66.6 bits (139), Expect(3) = 3e-057
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -1 / -1
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVF 4
+NTASRSMA M FSLKRALERSP GFMVSTF T VT F
Sbjct: 168 LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVTQF 49
Score = 56.5 bits (117), Expect(3) = 7e-023
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -3 / -3
Query: 148 GAGRVLRVREHGLAVDGGDELLLAEARAGEV 56
GA V+ V EHGLAVDGGDE LLAEARAGEV
Sbjct: 193 GAACVVGVAEHGLAVDGGDEALLAEARAGEV 101
Score = 56.5 bits (117), Expect(3) = 7e-023
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -2 / -3
Query: 539 DVDGQRLAVPLLEALEHGVDELALAD 462
DVDGQ LAVPLLEALEHGVDEL LAD
Sbjct: 589 DVDGQGLAVPLLEALEHGVDELVLAD 512
Score = 47.3 bits (97), Expect(3) = 2e-037
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1 / +1
Query: 1 QEHGDPGGQEGADHEPLGGPLQRALQREGAH 93
+E D G +EGADHEP PLQRALQRE H
Sbjct: 46 EELRDAGVEEGADHEPYRRPLQRALQREEPH 138
Score = 42.8 bits (87), Expect(3) = 3e-057
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -1
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 267 SASPGPAVRAWSTSTARSFCIS 202
Score = 40.5 bits (82), Expect(3) = 8e-079
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 203 LMQKLRAVLVDHALTAGPGEAE 268
Score = 35.0 bits (70), Expect(3) = 7e-023
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2 / -3
Query: 209 AAAEGVVHQHGAQFLHQ 159
A +GVVH+HGAQ LHQ
Sbjct: 253 AGGQGVVHEHGAQLLHQ 203
Score = 31.8 bits (63), Expect(3) = 2e-037
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 204 *CRSCAPCSWTT 239
>gb|BI956808.1|BI956808 HVSMEn0005G21f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005G21f, mRNA sequence
Length = 817
Score = 187 bits (402), Expect(3) = 9e-074
Identities = 74/111 (66%), Positives = 88/111 (79%)
Frame = +3 / +2
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 338 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 517
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
ELGCV+LTGEKL SPGEEC K FLGI+ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 518 ELGCVYLTGEKLLSPGEECTKGFLGITHNKLIDPMLECLKEWNGEPLPINV 670
Score = 148 bits (317), Expect(3) = 2e-054
Identities = 68/110 (61%), Positives = 72/110 (65%)
Frame = -3 / -2
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL W+MPR L+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 666 LMGRGSPFHSLRHSSMGSMSLLWVMPRKPLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 487
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 486 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 337
Score = 103 bits (219), Expect(3) = 1e-030
Identities = 43/60 (71%), Positives = 47/60 (78%)
Frame = +2 / +1
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPR G+ QG+P H P QA PHARVPQGV R+ AHQ
Sbjct: 487 VVPAVPLRPRGARLRVPHRREAAVPRGGMHQGLPWHHPQQAH*PHARVPQGVERRTPAHQ 666
Score = 89.0 bits (188), Expect(3) = 9e-074
Identities = 39/52 (75%), Positives = 44/52 (84%)
Frame = +2 / +2
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KN VTQV+KKVLTMN GDLSSARF K LI+AIDREAVF+YA+DA SA+ P
Sbjct: 128 KNCVTQVSKKVLTMNGGGDLSSARFIXKSLITAIDREAVFSYADDACSANYP 283
Score = 60.6 bits (126), Expect(3) = 2e-054
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = -1 / -2
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVF 4
+NTASRSMA M F +KRALERSP FMVSTF T VT F
Sbjct: 249 LNTASRSMAVMRLFXMKRALERSPPPFMVSTFFDTCVTQF 130
Score = 42.8 bits (87), Expect(3) = 2e-054
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -2
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 348 SASPGPAVRAWSTSTARSFCIS 283
Score = 40.5 bits (82), Expect(3) = 9e-074
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 284 LMQKLRAVLVDHALTAGPGEAE 349
Score = 40.5 bits (82), Expect(3) = 1e-030
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +1 / +1
Query: 1 QEHGDPGGQEGADHEPLGGPLQRALQREGAH 93
+E D G +EGADHE GPLQRAL E H
Sbjct: 127 EELRDAGVEEGADHERGRGPLQRALHXEKPH 219
Score = 31.8 bits (63), Expect(3) = 1e-030
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 285 *CRSCAPCSWTT 320
>gb|BG365997.1|BG365997 HVSMEi0004M09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004M09f, mRNA sequence
Length = 939
Score = 187 bits (402), Expect(3) = 6e-073
Identities = 74/111 (66%), Positives = 88/111 (79%)
Frame = +3 / +1
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+A+ E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYR VR+
Sbjct: 256 GEADSEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRLVRE 435
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
ELGCV+LTGEKL SPGEEC KV LGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 436 ELGCVYLTGEKLLSPGEECTKVLLGISQNKLIDPMLECLKEWNGEPLPINV 588
Score = 149 bits (319), Expect(3) = 7e-056
Identities = 69/110 (62%), Positives = 72/110 (65%)
Frame = -3 / -2
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMP TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 584 LMGRGSPFHSLRHSSMGSMSLFWLMPSKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 405
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 404 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 255
Score = 111 bits (238), Expect(3) = 8e-032
Identities = 46/60 (76%), Positives = 50/60 (83%)
Frame = +2 / +3
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPL GARLRVPHRREA VPRRG+ QG+ RHQP QA RPHARVPQGV R+A AHQ
Sbjct: 405 VVPAVPLSPRGARLRVPHRREAAVPRRGMHQGLARHQPEQAHRPHARVPQGVERRAPAHQ 584
Score = 87.7 bits (185), Expect(3) = 6e-073
Identities = 38/52 (73%), Positives = 43/52 (82%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KN VT V KKVLTMNP+GDLS AR EK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 46 KNCVTHVLKKVLTMNPTGDLSIARLIEKSLITAIDREAVFSYADDACSANYP 201
Score = 64.8 bits (135), Expect(3) = 7e-056
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -1 / -2
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVF 4
+NTASRSMA M FS+KRA+ERSP GFMVSTF T VT F
Sbjct: 167 LNTASRSMAVMRLFSIKRAMERSPVGFMVSTFFNTCVTQF 48
Score = 42.8 bits (87), Expect(3) = 7e-056
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -2
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 266 SASPGPAVRAWSTSTARSFCIS 201
Score = 39.1 bits (79), Expect(3) = 6e-073
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E +
Sbjct: 202 LMQKLRAVLVDHALTAGPGEAD 267
Score = 35.9 bits (72), Expect(3) = 8e-032
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +1 / +3
Query: 1 QEHGDPGGQEGADHEPLGGPLQRALQREGAH 93
+E D +E ADHEP PL RAL RE H
Sbjct: 45 EELRDACVEESADHEPYRRPLHRALDREEPH 137
Score = 31.8 bits (63), Expect(3) = 8e-032
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 203 *CRSCAPCSWTT 238
>gb|BQ469057.1|BQ469057 HM03D09r HM Hordeum vulgare subsp. vulgare cDNA clone HM03D09
5-PRIME, mRNA sequence
Length = 535
Score = 164 bits (353), Expect(3) = 4e-070
Identities = 67/98 (68%), Positives = 77/98 (78%)
Frame = +3 / +1
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 241 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 420
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLEC 500
ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLEC
Sbjct: 421 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLEC 534
Score = 131 bits (281), Expect(3) = 3e-051
Identities = 61/98 (62%), Positives = 64/98 (65%)
Frame = -3 / -3
Query: 499 HSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNERLSAIRLATGAV 320
HSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+ LS IRL GAV
Sbjct: 533 HSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLLSLIRLGMGAV 354
Query: 319 PXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
P SNL+ILE T S SASP
Sbjct: 353 PFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 240
Score = 99.1 bits (210), Expect(3) = 4e-070
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KN VTQV+KKVLTMNP+GDLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 31 KNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 186
Score = 97.3 bits (206), Expect(3) = 2e-031
Identities = 39/48 (81%), Positives = 42/48 (87%)
Frame = +2 / +3
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARV 499
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARV
Sbjct: 390 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARV 533
Score = 66.6 bits (139), Expect(3) = 3e-051
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -1 / -3
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVF 4
+NTASRSMA M FSLKRALERSP GFMVSTF T VT F
Sbjct: 152 LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVTQF 33
Score = 47.3 bits (97), Expect(3) = 2e-031
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1 / +3
Query: 1 QEHGDPGGQEGADHEPLGGPLQRALQREGAH 93
+E D G +EGADHEP PLQRALQRE H
Sbjct: 30 EELRDAGVEEGADHEPYRRPLQRALQREEPH 122
Score = 42.8 bits (87), Expect(3) = 3e-051
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -3
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 251 SASPGPAVRAWSTSTARSFCIS 186
Score = 40.5 bits (82), Expect(3) = 4e-070
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 187 LMQKLRAVLVDHALTAGPGEAE 252
Score = 31.8 bits (63), Expect(3) = 2e-031
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 188 *CRSCAPCSWTT 223
>gb|BG414191.1|BG414191 HVSMEk0001A07f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0001A07f, mRNA sequence
Length = 586
Score = 193 bits (417), Expect(3) = 2e-067
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +3 / +1
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 154 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 333
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 334 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 486
Score = 149 bits (321), Expect(3) = 3e-053
Identities = 69/110 (62%), Positives = 73/110 (66%)
Frame = -3 / -3
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSS+GS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 482 LMGRGSPFHSLRHSSIGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 303
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 302 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 153
Score = 113 bits (242), Expect(3) = 1e-028
Identities = 46/60 (76%), Positives = 52/60 (86%)
Frame = +2 / +3
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RP+ARVPQG+ R+A AHQ
Sbjct: 303 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPNARVPQGMERRAPAHQ 482
Score = 61.1 bits (127), Expect(3) = 2e-067
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = +2 / +1
Query: 59 LSSARFSEKELISAIDREAVFTYAEDAASASLP 157
LSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 1 LSSARFSEKSLITAIDREAVFSYADDACSANYP 99
Score = 54.7 bits (113), Expect(3) = 3e-053
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = -3 / -2
Query: 148 GAGRVLRVREHGLAVDGGDELLLAEARAGE 59
GA V+ V EHGLAVDGGDE LLAEARAGE
Sbjct: 90 GAACVVGVAEHGLAVDGGDEALLAEARAGE 1
Score = 42.8 bits (87), Expect(3) = 3e-053
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -3
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 164 SASPGPAVRAWSTSTARSFCIS 99
Score = 40.5 bits (82), Expect(3) = 2e-067
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 100 LMQKLRAVLVDHALTAGPGEAE 165
Score = 31.8 bits (63), Expect(3) = 1e-028
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 101 *CRSCAPCSWTT 136
Score = 22.1 bits (42), Expect(3) = 1e-028
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 61 LQRALQREGAH 93
LQRALQRE H
Sbjct: 3 LQRALQREEPH 35
>gb|BI956268.1|BI956268 HVSMEn0001M16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0001M16f, mRNA sequence
Length = 613
Score = 188 bits (404), Expect(3) = 2e-066
Identities = 75/111 (67%), Positives = 88/111 (79%)
Frame = +3 / +2
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRF R+
Sbjct: 161 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFXRE 340
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PL IN+
Sbjct: 341 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLAINV 493
Score = 146 bits (314), Expect(3) = 1e-053
Identities = 68/110 (61%), Positives = 71/110 (64%)
Frame = -3 / -2
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LM G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS R KRYSGN+
Sbjct: 489 LMARGSPFHSLRHSSMGSISLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRXKRYSGND 310
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 309 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 160
Score = 104 bits (222), Expect(3) = 1e-027
Identities = 44/60 (73%), Positives = 48/60 (80%)
Frame = +2 / +1
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPL GARLRVPHRREA VPRRG+ QG+PRH P QA PHARVPQGV R+A HQ
Sbjct: 310 VVPAVPLXPRGARLRVPHRREAAVPRRGMHQGLPRH*PKQAY*PHARVPQGVERRAPGHQ 489
Score = 63.8 bits (133), Expect(3) = 2e-066
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +2 / +2
Query: 56 DLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
DLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 5 DLSSARFSEKSLITAIDREAVFSYADDACSANYP 106
Score = 59.7 bits (124), Expect(3) = 1e-053
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = -3 / -1
Query: 148 GAGRVLRVREHGLAVDGGDELLLAEARAGEVP 53
GA V+ V EHGLAVDGGDE LLAEARAGEVP
Sbjct: 97 GAACVVGVAEHGLAVDGGDEALLAEARAGEVP 2
Score = 42.8 bits (87), Expect(3) = 1e-053
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -2
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 171 SASPGPAVRAWSTSTARSFCIS 106
Score = 40.5 bits (82), Expect(3) = 2e-066
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 107 LMQKLRAVLVDHALTAGPGEAE 172
Score = 31.8 bits (63), Expect(3) = 1e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 108 *CRSCAPCSWTT 143
Score = 28.1 bits (55), Expect(3) = 1e-027
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 55 GPLQRALQREGAH 93
GPLQRALQRE H
Sbjct: 4 GPLQRALQREEPH 42
>gb|BF628845.2|BF628845 HVSMEb0008N10f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0008N10f, mRNA sequence
Length = 758
Score = 151 bits (325), Expect(3) = 3e-066
Identities = 65/110 (59%), Positives = 77/110 (70%)
Frame = +3 / +1
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPL R VR+
Sbjct: 256 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLCRLVRR 435
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPIN 536
ELGCV LTG+KL SPG EC K L ISQ KL+ PML CL WDG+PL +N
Sbjct: 436 ELGCVCLTGDKLLSPGRECTKE*LEISQNKLMGPMLGCLGGWDGEPLAMN 585
Score = 116 bits (248), Expect(3) = 8e-047
Identities = 56/109 (51%), Positives = 63/109 (57%)
Frame = -3 / -1
Query: 532 MGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNER 353
M G PSH RH SMG SL WL+ +L+HS PG S SPVR+T PSS RTKR+SGN+
Sbjct: 581 MARGSPSHPPRHPSMGPMSLFWLISSYSLVHSRPGLSSLSPVRHTHPSSLRTKRHSGNDL 402
Query: 352 LSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 401 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 255
Score = 99.1 bits (210), Expect(3) = 3e-066
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KN VTQV+KKVLTMNP+GDLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 46 KNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 201
Score = 85.8 bits (181), Expect(3) = 1e-027
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = +2 / +3
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPL A AR+RVPHRR A PR G+ QGV R QP QA PHARVP+ +GR A H+
Sbjct: 405 VVPAVPLGAQRARVRVPHRR*AAEPRAGMHQGVARDQPEQAHGPHARVPRWMGRGAPGHE 584
Score = 66.6 bits (139), Expect(3) = 8e-047
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -1 / -1
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVF 4
+NTASRSMA M FSLKRALERSP GFMVSTF T VT F
Sbjct: 167 LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVTQF 48
Score = 47.3 bits (97), Expect(3) = 1e-027
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1 / +3
Query: 1 QEHGDPGGQEGADHEPLGGPLQRALQREGAH 93
+E D G +EGADHEP PLQRALQRE H
Sbjct: 45 EELRDAGVEEGADHEPYRRPLQRALQREEPH 137
Score = 42.8 bits (87), Expect(3) = 8e-047
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -1
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 266 SASPGPAVRAWSTSTARSFCIS 201
Score = 40.5 bits (82), Expect(3) = 3e-066
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 202 LMQKLRAVLVDHALTAGPGEAE 267
Score = 31.8 bits (63), Expect(3) = 1e-027
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 203 *CRSCAPCSWTT 238
>gb|BI959849.1|BI959849 HVSMEn0022A20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0022A20f, mRNA sequence
Length = 623
Score = 196 bits (422), Expect(3) = 2e-064
Identities = 78/111 (70%), Positives = 91/111 (81%)
Frame = +3 / +2
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AERE +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 143 GEAEREGTVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 322
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 323 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 475
Score = 150 bits (323), Expect(3) = 2e-049
Identities = 70/110 (63%), Positives = 73/110 (66%)
Frame = -3 / -3
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 471 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 292
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 291 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVPSLSASP 142
Score = 118 bits (252), Expect(2) = 5e-029
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / +1
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 292 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 471
Score = 48.7 bits (100), Expect(3) = 2e-064
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +2 / +2
Query: 77 SEKELISAIDREAVFTYAEDAASASLP 157
SEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 8 SEKSLITAIDREAVFSYADDACSANYP 88
Score = 42.8 bits (87), Expect(3) = 2e-049
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -3
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 153 SASPGPAVRAWSTSTARSFCIS 88
Score = 41.4 bits (84), Expect(3) = 2e-049
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = -3 / -2
Query: 148 GAGRVLRVREHGLAVDGGDELLLA 77
GA V+ V EHGLAVDGGDE LLA
Sbjct: 79 GAACVVGVAEHGLAVDGGDEALLA 8
Score = 40.5 bits (82), Expect(3) = 2e-064
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 89 LMQKLRAVLVDHALTAGPGEAE 154
Score = 31.8 bits (63), Expect(2) = 5e-029
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 90 *CRSCAPCSWTT 125
>gb|AV917458.1|AV917458 AV917458 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10a01 3', mRNA sequence
Length = 701
Score = 193 bits (417), Expect(3) = 7e-062
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +3 / -2
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 577 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 398
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 397 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 245
Score = 151 bits (325), Expect(3) = 3e-048
Identities = 70/110 (63%), Positives = 73/110 (66%)
Frame = -3 / +3
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 249 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 428
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 429 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 578
Score = 118 bits (252), Expect(2) = 6e-029
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / -1
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 428 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 249
Score = 42.8 bits (87), Expect(3) = 3e-048
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / +3
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 567 SASPGPAVRAWSTSTARSFCIS 632
Score = 42.3 bits (86), Expect(3) = 7e-062
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +2 / -2
Query: 89 LISAIDREAVFTYAEDAASASLP 157
LI+AIDREAVF+YA+DA SA+ P
Sbjct: 700 LITAIDREAVFSYADDACSANYP 632
Score = 40.5 bits (82), Expect(3) = 7e-062
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / -2
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 631 LMQKLRAVLVDHALTAGPGEAE 566
Score = 36.3 bits (73), Expect(3) = 3e-048
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3 / +2
Query: 148 GAGRVLRVREHGLAVDGGDE 89
GA V+ V EHGLAVDGGDE
Sbjct: 641 GAACVVGVAEHGLAVDGGDE 700
Score = 31.8 bits (63), Expect(2) = 6e-029
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 630 *CRSCAPCSWTT 595
>gb|BM816193.1|BM816193 HC109D04_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109D04_T3.ab1 similar to DNA-(apurinic or apyrimidinic
site) lyase,Histidine ammonia-lyase,Phenylalanine
ammonia-lyase,, mRNA sequence
Length = 812
Score = 99.1 bits (210), Expect(4) = 6e-060
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +2 / +2
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KN VTQV+KKVLTMNP+GDLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 269 KNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 424
Score = 97.3 bits (206), Expect(4) = 6e-060
Identities = 39/50 (78%), Positives = 43/50 (86%)
Frame = +3 / +3
Query: 348 DSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLE 497
+SRSFPLYRFVR+ELGCV+LT EKL SPGEEC K LGIS KL+DPMLE
Sbjct: 618 ESRSFPLYRFVREELGCVYLTAEKLLSPGEECTKGLLGISPDKLIDPMLE 767
Score = 90.4 bits (191), Expect(3) = 6e-029
Identities = 37/47 (78%), Positives = 39/47 (82%)
Frame = +2 / +2
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHAR 496
+VPAVPLR GARLRVPHRREA VPRRG+ QG RHQP QA RPHAR
Sbjct: 626 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGSSRHQPRQAHRPHAR 766
Score = 84.5 bits (178), Expect(4) = 2e-041
Identities = 38/50 (76%), Positives = 40/50 (80%)
Frame = -3 / -2
Query: 496 SSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNERLS 347
SSMGS SL LMPR L+HSSPGD SFS VR TQPSS RTKRYSGN+ LS
Sbjct: 766 SSMGSMSLSGLMPRRPLVHSSPGDSSFSAVRYTQPSSSRTKRYSGNDLLS 617
Score = 66.6 bits (139), Expect(4) = 2e-041
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -1 / -3
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVF 4
+NTASRSMA M FSLKRALERSP GFMVSTF T VT F
Sbjct: 390 LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVTQF 271
Score = 51.5 bits (106), Expect(4) = 6e-060
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3 / +2
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPV 332
G+AE E +VFS+I KFEEELR+ LP+ GTAP+
Sbjct: 479 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPI 604
Score = 47.3 bits (97), Expect(3) = 6e-029
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1 / +1
Query: 1 QEHGDPGGQEGADHEPLGGPLQRALQREGAH 93
+E D G +EGADHEP PLQRALQRE H
Sbjct: 268 EELRDAGVEEGADHEPYRRPLQRALQREEPH 360
Score = 42.8 bits (87), Expect(4) = 2e-041
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -3
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 489 SASPGPAVRAWSTSTARSFCIS 424
Score = 40.5 bits (82), Expect(4) = 6e-060
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 425 LMQKLRAVLVDHALTAGPGEAE 490
Score = 31.8 bits (63), Expect(3) = 6e-029
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 426 *CRSCAPCSWTT 461
Score = 31.8 bits (63), Expect(4) = 2e-041
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -3 / -3
Query: 349 SAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
S ++ GAVP SNL+ILE T S SASP
Sbjct: 621 SPYQVGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 478
>gb|BI959802.1|BI959802 HVSMEn0021J20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021J20f, mRNA sequence
Length = 480
Score = 154 bits (330), Expect(3) = 2e-059
Identities = 63/94 (67%), Positives = 73/94 (77%)
Frame = +3 / +2
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 197 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 376
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDP 488
ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DP
Sbjct: 377 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDP 478
Score = 124 bits (265), Expect(3) = 4e-046
Identities = 58/95 (61%), Positives = 61/95 (64%)
Frame = -3 / -1
Query: 490 MGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNERLSAIRLATGAVPXX 311
MGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+ LS IRL GAVP
Sbjct: 480 MGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLLSLIRLGMGAVPFS 301
Query: 310 XXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
SNL+ILE T S SASP
Sbjct: 300 KATRAASISRGRADRSSSSNLLILENTVASLSASP 196
Score = 87.7 bits (185), Expect(3) = 1e-023
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +2 / +1
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPH 490
+VPAVPLR ARLRVPHRREA VPRRG+ QG+PRHQP QA RPH
Sbjct: 346 VVPAVPLRPRRARLRVPHRREAAVPRRGMHQGLPRHQPKQAHRPH 480
Score = 73.9 bits (155), Expect(3) = 2e-059
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = +2 / +2
Query: 35 LTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
L NP+GDLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 20 LRRNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 142
Score = 56.5 bits (117), Expect(3) = 4e-046
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -3 / -3
Query: 148 GAGRVLRVREHGLAVDGGDELLLAEARAGEV 56
GA V+ V EHGLAVDGGDE LLAEARAGEV
Sbjct: 133 GAACVVGVAEHGLAVDGGDEALLAEARAGEV 41
Score = 42.8 bits (87), Expect(3) = 4e-046
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -1
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 207 SASPGPAVRAWSTSTARSFCIS 142
Score = 40.5 bits (82), Expect(3) = 2e-059
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 143 LMQKLRAVLVDHALTAGPGEAE 208
Score = 31.8 bits (63), Expect(3) = 1e-023
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 144 *CRSCAPCSWTT 179
Score = 30.4 bits (60), Expect(3) = 1e-023
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +1
Query: 34 ADHEPLGGPLQRALQREGAH 93
A+ EP PLQRALQRE H
Sbjct: 19 AEAEPYRRPLQRALQREEPH 78
>gb|AL505275.1|AL505275 AL505275 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07P09V 5', mRNA sequence
Length = 487
Score = 127 bits (271), Expect(3) = 2e-057
Identities = 52/82 (63%), Positives = 61/82 (74%)
Frame = +3 / +1
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 241 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 420
Query: 387 ELGCVFLTGEKLKSPGEECNKV 452
ELGCV+L GEKL SPGEEC KV
Sbjct: 421 ELGCVYLXGEKLLSPGEECTKV 486
Score = 99.1 bits (210), Expect(3) = 8e-041
Identities = 47/82 (57%), Positives = 50/82 (60%)
Frame = -3 / -3
Query: 451 TLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNERLSAIRLATGAVPXXXXXXXXXXXXXXX 272
TL+HSSPGD SFSP R TQPSS RTKRYSGN+ LS IRL GAVP
Sbjct: 485 TLVHSSPGDSSFSPXRYTQPSSSRTKRYSGNDLLSLIRLGMGAVPFSKATRAASISRGRA 306
Query: 271 XXXXXSNLVILEKTEGSRSASP 206
SNL+ILE T S SASP
Sbjct: 305 DRSSSSNLLILENTVASLSASP 240
Score = 94.5 bits (200), Expect(3) = 2e-057
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KN VTQV+KKVLTMNP+GDLSSARF EK LI+ IDREAVF+YA+DA SA+ P
Sbjct: 31 KNCVTQVSKKVLTMNPTGDLSSARFIEKSLITVIDREAVFSYADDACSANYP 186
Score = 63.8 bits (133), Expect(3) = 8e-041
Identities = 29/40 (72%), Positives = 31/40 (77%)
Frame = -1 / -3
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVF 4
+NTASRSM M FS+KRALERSP GFMVSTF T VT F
Sbjct: 152 LNTASRSMTVMRLFSMKRALERSPVGFMVSTFFDTCVTQF 33
Score = 42.8 bits (87), Expect(3) = 8e-041
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -3
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 251 SASPGPAVRAWSTSTARSFCIS 186
Score = 40.5 bits (82), Expect(3) = 2e-057
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 187 LMQKLRAVLVDHALTAGPGEAE 252
>gb|BE214612.2|BE214612 HV_CEb0003P13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003P13f, mRNA sequence
Length = 728
Score = 121 bits (258), Expect(3) = 4e-057
Identities = 53/88 (60%), Positives = 60/88 (68%)
Frame = +3 / +1
Query: 225 PSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVF 404
P R KFEEELR+ LP+ GT P+ N I +SRSFPLYRFVR+ELGCV+
Sbjct: 463 PRCSPRSNKFEEELRSALPREIEAARVAF*NGTEPIPNLIKESRSFPLYRFVREELGCVY 642
Query: 405 LTGEKLKSPGEECNKVFLGISQGKLVDP 488
LT EKL SPGEE K FLGISQ KL+DP
Sbjct: 643 LTREKLVSPGEEWPKGFLGISQNKLIDP 726
Score = 99.1 bits (210), Expect(3) = 4e-057
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +2 / +3
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KN VTQV+KKVLTMNP+GDLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 234 KNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 389
Score = 96.4 bits (204), Expect(3) = 8e-041
Identities = 43/58 (74%), Positives = 45/58 (77%)
Frame = -3 / -1
Query: 490 MGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNERLSAIRLATGAVP 317
MGS SL WLMPR L HSSPGD SFS VR TQPSS RTKRYSGN+ LS IRL G+VP
Sbjct: 728 MGSMSLFWLMPRKPLGHSSPGDTSFSRVRYTQPSSSRTKRYSGNDLLSLIRLGMGSVP 555
Score = 74.8 bits (157), Expect(3) = 2e-024
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +2 / +3
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPH 490
+VPAVPLR GARLRVPH RE VPR G+ Q +P HQP QA RPH
Sbjct: 594 VVPAVPLRPRGARLRVPHPRETGVPRGGMAQRLPWHQPEQAHRPH 728
Score = 66.6 bits (139), Expect(3) = 8e-041
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -1 / -2
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVF 4
+NTASRSMA M FSLKRALERSP GFMVSTF T VT F
Sbjct: 355 LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVTQF 236
Score = 47.3 bits (97), Expect(3) = 2e-024
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1 / +2
Query: 1 QEHGDPGGQEGADHEPLGGPLQRALQREGAH 93
+E D G +EGADHEP PLQRALQRE H
Sbjct: 233 EELRDAGVEEGADHEPYRRPLQRALQREEPH 325
Score = 42.8 bits (87), Expect(3) = 8e-041
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -2
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 454 SASPGPAVRAWSTSTARSFCIS 389
Score = 40.5 bits (82), Expect(3) = 4e-057
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 390 LMQKLRAVLVDHALTAGPGEAE 455
Score = 31.8 bits (63), Expect(3) = 2e-024
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 391 *CRSCAPCSWTT 426
>gb|BF261029.2|BF261029 HVSMEf0023J05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023J05f, mRNA sequence
Length = 819
Score = 118 bits (253), Expect(3) = 2e-056
Identities = 51/108 (47%), Positives = 65/108 (60%)
Frame = +3 / +3
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 444 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 623
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLP 530
ELGCV+LTGEKL SP + F +++ P +P P
Sbjct: 624 ELGCVYLTGEKLLSPARNAPRSFSALARTSSSTPCSSASGSGTARPCP 767
Score = 99.1 bits (210), Expect(3) = 2e-056
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +2 / +3
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KN VTQV+KKVLTMNP+GDLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 234 KNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 389
Score = 86.3 bits (182), Expect(4) = 2e-052
Identities = 42/75 (56%), Positives = 44/75 (58%)
Frame = -3 / -3
Query: 430 GDLSFSPVRNTQPSSWRTKRYSGNERLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSN 251
GD SFSPVR TQPSS RTKRYSGN+ LS IRL GAVP SN
Sbjct: 667 GDSSFSPVRYTQPSSSRTKRYSGNDLLSLIRLGMGAVPFSKATRAASISRGRADRSSSSN 488
Query: 250 LVILEKTEGSRSASP 206
L+ILE T S SASP
Sbjct: 487 LLILENTVASLSASP 443
Score = 77.1 bits (162), Expect(4) = 5e-035
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +3 / +2
Query: 429 PGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
PGEEC KVFLGISQ KL+DPMLECL+EW+G+ LPI
Sbjct: 665 PGEECTKVFLGISQNKLIDPMLECLREWNGEALPI 769
Score = 67.0 bits (140), Expect(4) = 2e-052
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = -3 / -1
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPG 428
+MG P HSLRHSSMGS SL WLMPR TL+HSSPG
Sbjct: 771 VMGRASPFHSLRHSSMGSMSLFWLMPRKTLVHSSPG 664
Score = 66.6 bits (139), Expect(4) = 2e-052
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -1 / -3
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVF 4
+NTASRSMA M FSLKRALERSP GFMVSTF T VT F
Sbjct: 355 LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVTQF 236
Score = 51.9 bits (107), Expect(4) = 5e-035
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +2 / +2
Query: 356 LVPAVPLRAPGARLRVPHRREAQVP 430
+VPAVPLR+ GARLRVPHRREA VP
Sbjct: 593 VVPAVPLRSRGARLRVPHRREAAVP 667
Score = 47.3 bits (97), Expect(4) = 5e-035
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1 / +2
Query: 1 QEHGDPGGQEGADHEPLGGPLQRALQREGAH 93
+E D G +EGADHEP PLQRALQRE H
Sbjct: 233 EELRDAGVEEGADHEPYRRPLQRALQREEPH 325
Score = 42.8 bits (87), Expect(4) = 2e-052
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -3
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 454 SASPGPAVRAWSTSTARSFCIS 389
Score = 40.5 bits (82), Expect(3) = 2e-056
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 390 LMQKLRAVLVDHALTAGPGEAE 455
Score = 31.8 bits (63), Expect(4) = 5e-035
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 391 *CRSCAPCSWTT 426
>gb|BQ768801.1|BQ768801 EBro08_SQ012_P15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_P15 5', mRNA sequence
Length = 679
Score = 150 bits (323), Expect(3) = 2e-056
Identities = 60/104 (57%), Positives = 79/104 (75%)
Frame = +3 / +1
Query: 222 EPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCV 401
E SVF+++ FE+ELRAVLP+ GTA NRI++ RS+PLYRFVR+ELG
Sbjct: 352 ETSVFAKLATFEQELRAVLPKEVEAARSAVENGTAAQQNRISECRSYPLYRFVRKELGTE 531
Query: 402 FLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
+LTGEK +SPGEE +KVF+ ++QGK +D +LECLKEW+G+PLPI
Sbjct: 532 YLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPI 663
Score = 95.5 bits (202), Expect(2) = 1e-025
Identities = 50/118 (42%), Positives = 57/118 (48%)
Frame = -3 / -3
Query: 532 MGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNER 353
+G G P HS RHS S LPW M NTL SSPGD FSPV+ + PSS RT R SG +R
Sbjct: 662 IGRGSPFHSFRHSRSASMCLPWFMATNTLSTSSPGDRVFSPVKYSVPSSLRTNR*SGYDR 483
Query: 352 LSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASPLLRAWSTST 179
S IR AVP SN+ L T+ S S S A + ST
Sbjct: 482 HSEIRFCCAAVPFSTALLAASTSFGSTARSSCSNVASLANTDVSTSCSASPLAKACST 309
Score = 67.5 bits (141), Expect(3) = 2e-056
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
K+ V VA+K L+ N +G L SARF EK+L+ IDREAVF YA+D SA+ P
Sbjct: 127 KSCVKTVARKTLSTNSNGHLHSARFCEKDLLLTIDREAVFAYADDPCSANYP 282
Score = 40.9 bits (83), Expect(2) = 1e-025
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = -1 / -3
Query: 120 NTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVFL 1
NTASRS+ SFS KRAL R P ++S FLAT T L
Sbjct: 245 NTASRSIVRRRSFSQKRALCRWPLLLVLSVFLATVFTQLL 126
Score = 40.0 bits (81), Expect(3) = 2e-056
Identities = 15/22 (68%), Positives = 21/22 (95%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQK+RAVLV+HAL++G+AE +
Sbjct: 283 LMQKMRAVLVEHALANGEAEHD 348
>gb|AV928635.1|AV928635 AV928635 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd15c08 3', mRNA sequence
Length = 671
Score = 193 bits (417), Expect(2) = 8e-055
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +3 / -2
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 577 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 398
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 397 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 245
Score = 151 bits (325), Expect(2) = 6e-043
Identities = 70/110 (63%), Positives = 73/110 (66%)
Frame = -3 / +3
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 249 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 428
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 429 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 578
Score = 118 bits (252), Expect(2) = 5e-029
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / -1
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 428 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 249
Score = 42.8 bits (87), Expect(2) = 6e-043
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / +3
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 567 SASPGPAVRAWSTSTARSFCIS 632
Score = 40.5 bits (82), Expect(2) = 8e-055
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / -2
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 631 LMQKLRAVLVDHALTAGPGEAE 566
Score = 31.8 bits (63), Expect(2) = 5e-029
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 630 *CRSCAPCSWTT 595
>gb|AV931028.1|AV931028 AV931028 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18e12 3', mRNA sequence
Length = 664
Score = 193 bits (417), Expect(2) = 8e-055
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +3 / -1
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 577 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 398
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 397 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 245
Score = 151 bits (325), Expect(2) = 6e-043
Identities = 70/110 (63%), Positives = 73/110 (66%)
Frame = -3 / +3
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 249 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 428
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 429 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 578
Score = 118 bits (252), Expect(2) = 5e-029
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / -3
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 428 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 249
Score = 42.8 bits (87), Expect(2) = 6e-043
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / +3
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 567 SASPGPAVRAWSTSTARSFCIS 632
Score = 40.5 bits (82), Expect(2) = 8e-055
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / -1
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 631 LMQKLRAVLVDHALTAGPGEAE 566
Score = 31.8 bits (63), Expect(2) = 5e-029
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -2
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 630 *CRSCAPCSWTT 595
>gb|CB882049.1|CB882049 HM11L11w HM Hordeum vulgare subsp. vulgare cDNA clone HM11L11
3-PRIME, mRNA sequence
Length = 658
Score = 137 bits (293), Expect(3) = 2e-054
Identities = 53/113 (46%), Positives = 75/113 (66%)
Frame = +3 / -3
Query: 195 ALSSGDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYR 374
A G+ E S+F+++ +FE+ +RA LP+ GT NRI D RS+PLY+
Sbjct: 428 ANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQ 249
Query: 375 FVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
FVR+ G +LTGEK +SPGEE NKV + +++ K +DP+LECLKEW+G PLP+
Sbjct: 248 FVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPL 90
Score = 90.0 bits (190), Expect(2) = 1e-027
Identities = 51/118 (43%), Positives = 57/118 (48%)
Frame = -3 / +1
Query: 529 GSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNERL 350
G G P HSLRHSS GS L M +TL SSPGD FSPVR + P + RT SG ER
Sbjct: 94 GRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQ 273
Query: 349 SAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASPLLRAWSTSTA 176
S IRL VP SN L K E SR+ SP A + ST+
Sbjct: 274 SLIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSPLASACSTS 447
Score = 72.1 bits (151), Expect(3) = 2e-054
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = +2 / -3
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
+N V QVAKK L+MN G L ARF EK+L++AIDREAVF YA+D S + P
Sbjct: 626 RNCVMQVAKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYP 471
Score = 53.3 bits (110), Expect(2) = 1e-027
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -1 / +1
Query: 126 YVNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVFL 1
Y NTASRS+A SFS KRA+ R P FM+ FLAT +T FL
Sbjct: 502 YANTASRSIAVSRSFSQKRAMWRPPMLFMLRVFLATCITQFL 627
Score = 42.3 bits (86), Expect(3) = 2e-054
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3 / -3
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQKLRAVLV+HAL++GD ER
Sbjct: 470 LMQKLRAVLVEHALANGDGER 408
>gb|BU990224.1|BU990224 HF24H03r HF Hordeum vulgare subsp. vulgare cDNA clone HF24H03
5-PRIME, mRNA sequence
Length = 591
Score = 137 bits (293), Expect(3) = 2e-054
Identities = 53/113 (46%), Positives = 75/113 (66%)
Frame = +3 / +3
Query: 195 ALSSGDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYR 374
A G+ E S+F+++ +FE+ +RA LP+ GT NRI D RS+PLY+
Sbjct: 222 ANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQ 401
Query: 375 FVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
FVR+ G +LTGEK +SPGEE NKV + +++ K +DP+LECLKEW+G PLP+
Sbjct: 402 FVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPL 560
Score = 90.0 bits (190), Expect(2) = 1e-027
Identities = 51/118 (43%), Positives = 57/118 (48%)
Frame = -3 / -3
Query: 529 GSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNERL 350
G G P HSLRHSS GS L M +TL SSPGD FSPVR + P + RT SG ER
Sbjct: 556 GRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQ 377
Query: 349 SAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASPLLRAWSTSTA 176
S IRL VP SN L K E SR+ SP A + ST+
Sbjct: 376 SLIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSPLASACSTS 203
Score = 72.1 bits (151), Expect(3) = 2e-054
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = +2 / +3
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
+N V QVAKK L+MN G L ARF EK+L++AIDREAVF YA+D S + P
Sbjct: 24 RNCVMQVAKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYP 179
Score = 53.3 bits (110), Expect(2) = 1e-027
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -1 / -3
Query: 126 YVNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVFL 1
Y NTASRS+A SFS KRA+ R P FM+ FLAT +T FL
Sbjct: 148 YANTASRSIAVSRSFSQKRAMWRPPMLFMLRVFLATCITQFL 23
Score = 42.3 bits (86), Expect(3) = 2e-054
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3 / +3
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQKLRAVLV+HAL++GD ER
Sbjct: 180 LMQKLRAVLVEHALANGDGER 242
>emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1670 bp)
Length = 1670
Score = 149 bits (321), Expect(3) = 3e-054
Identities = 60/104 (57%), Positives = 78/104 (75%)
Frame = +3 / +3
Query: 222 EPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCV 401
E SVF+++ FE+ELRAVLP GTA NRI++ RS+PLYRFVR+ELG
Sbjct: 1113 ETSVFAKLATFEQELRAVLPTEVEAARSAVENGTAAQQNRISECRSYPLYRFVRKELGTE 1292
Query: 402 FLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
+LTGEK +SPGEE +KVF+ ++QGK +D +LECLKEW+G+PLPI
Sbjct: 1293 YLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPI 1424
Score = 95.0 bits (201), Expect(2) = 3e-026
Identities = 50/118 (42%), Positives = 57/118 (48%)
Frame = -3 / -2
Query: 532 MGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNER 353
+G G P HS RHS S LPW M NTL SSPGD FSPV+ + PSS RT R SG +R
Sbjct: 1423 IGRGSPFHSFRHSRSASMCLPWFMATNTLSTSSPGDRVFSPVKYSVPSSLRTNR*SGYDR 1244
Query: 352 LSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASPLLRAWSTST 179
S IR AVP SN+ L T+ S S S A + ST
Sbjct: 1243 HSEIRFCCAAVPFSTALRAASTSVGNTARSSCSNVASLANTDVSTSCSASPLAKACST 1070
Score = 61.1 bits (127), Expect(3) = 3e-054
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = +2 / +3
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
K+ V VA+K L+ + +G L ARF EK+L+ IDREAVF YA+D S + P
Sbjct: 888 KSCVKTVARKTLSTDNNGHLHKARFCEKDLLLTIDREAVFAYADDPCSVNYP 1043
Score = 43.7 bits (89), Expect(2) = 3e-026
Identities = 23/42 (54%), Positives = 26/42 (61%)
Frame = -1 / -2
Query: 126 YVNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVFL 1
Y NTASRS+ SFS KRAL R P ++S FLAT T L
Sbjct: 1012 YANTASRSIVSRRSFSQKRALWRWPLLSVLSVFLATVFTQLL 887
Score = 40.0 bits (81), Expect(3) = 3e-054
Identities = 15/22 (68%), Positives = 21/22 (95%)
Frame = +3 / +3
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQK+RAVLV+HAL++G+AE +
Sbjct: 1044 LMQKMRAVLVEHALANGEAEHD 1109
>gb|BQ767013.1|BQ767013 EBro08_SQ007_A24_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_A24 5', mRNA sequence
Length = 690
Score = 151 bits (325), Expect(3) = 9e-053
Identities = 60/106 (56%), Positives = 77/106 (72%)
Frame = +3 / +3
Query: 216 EREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELG 395
+ E SV +++ FEEELR LP+ GTA + NRI + RS+PLYRFVR+ELG
Sbjct: 261 DAETSVLAKVALFEEELRKTLPRAVEAARAAVESGTAEMPNRITECRSYPLYRFVREELG 440
Query: 396 CVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
V+LTGEK +SPGEE NKV + I+QGK +D +LECLKEW+G+PLPI
Sbjct: 441 TVYLTGEKTRSPGEELNKVLVAINQGKHIDALLECLKEWNGEPLPI 578
Score = 104 bits (222), Expect(2) = 5e-028
Identities = 57/125 (45%), Positives = 63/125 (50%)
Frame = -3 / -3
Query: 550 VF*LMLMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKR 371
+F*+ MG G P HSLRHSS S LPWLM +TLL SSPGD FSPVR T PSS RT R
Sbjct: 595 MF*V*QMGRGSPFHSLRHSSSASMCLPWLMATSTLLSSSPGDRVFSPVRYTVPSSSRTNR 416
Query: 370 YSGNERLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASPLLRAW 191
G ER S I L AVP SN TE S S S +
Sbjct: 415 *RGYERHSVILLGISAVPLSTAARAASTARGSVLRSSSSNKATFANTEVSASNSAMPLER 236
Query: 190 STSTA 176
+ ST+
Sbjct: 235 ARSTS 221
Score = 62.5 bits (130), Expect(3) = 9e-053
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +2 / +3
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
K+ V VAKK L+ N +G L ARF EK+L+ I+REAVF YA+D S + P
Sbjct: 42 KSCVMTVAKKTLSTNSTGGLHVARFCEKDLLQEIEREAVFAYADDPCSPNYP 197
Score = 40.0 bits (81), Expect(2) = 5e-028
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -1 / -3
Query: 120 NTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVFL 1
NTASRS++ SFS KRA R P ++S F AT +T L
Sbjct: 160 NTASRSISWSRSFSQKRAT*RPPVELVLSVFFATVITQLL 41
Score = 31.8 bits (63), Expect(3) = 9e-053
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3 / +3
Query: 159 LMQKLRAVLVDHALSSGDAE 218
LM+KLR VLV+ ALS+G AE
Sbjct: 198 LMKKLRGVLVERALSNGMAE 257
>gb|CB881918.1|CB881918 HM11E17w HM Hordeum vulgare subsp. vulgare cDNA clone HM11E17
3-PRIME, mRNA sequence
Length = 620
Score = 127 bits (273), Expect(3) = 2e-052
Identities = 49/108 (45%), Positives = 71/108 (65%)
Frame = +3 / -3
Query: 201 SSGDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFV 380
++ A E S+F+++ +FE+ +RA LP+ GT NRI D RS+PLY+FV
Sbjct: 363 ATASAPLETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQFV 184
Query: 381 RQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKP 524
R+ G +LTGEK +SPGEE NKV + +++ K +DP+LECLKEW +P
Sbjct: 183 REVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWTARP 40
Score = 78.5 bits (165), Expect(3) = 2e-031
Identities = 45/104 (43%), Positives = 48/104 (46%)
Frame = -3 / +2
Query: 523 GLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNERLSA 344
G HSLRHSS GS L M +TL SSPGD FSPVR + P + RT SG ER S
Sbjct: 41 GRAVHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQSL 220
Query: 343 IRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSA 212
IRL VP SN L K E SR A
Sbjct: 221 IRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRGA 352
Score = 72.1 bits (151), Expect(3) = 2e-052
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = +2 / -2
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
+N V QVAKK L+MN G L ARF EK+L++AIDREAVF YA+D S + P
Sbjct: 568 RNCVMQVAKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYP 413
Score = 53.3 bits (110), Expect(3) = 2e-031
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -1 / +3
Query: 126 YVNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVFL 1
Y NTASRS+A SFS KRA+ R P FM+ FLAT +T FL
Sbjct: 444 YANTASRSIAVSRSFSQKRAMWRPPMLFMLRVFLATCITQFL 569
Score = 45.1 bits (92), Expect(3) = 2e-052
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3 / -2
Query: 159 LMQKLRAVLVDHALSSGDAEREP 227
LMQKLRAVLV+HAL++GD ER P
Sbjct: 412 LMQKLRAVLVEHALANGDGERAP 344
Score = 42.3 bits (86), Expect(3) = 2e-031
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -3 / +3
Query: 235 KTEGSRSASPLLRAWSTSTARSFCIS 158
++ G+RS SPL A STSTARSFCIS
Sbjct: 336 RSPGARSPSPLASACSTSTARSFCIS 413
>gb|AV931810.1|AV931810 AV931810 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26e14 3', mRNA sequence
Length = 602
Score = 193 bits (417), Expect(2) = 3e-052
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +3 / -3
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 558 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 379
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 378 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 226
Score = 151 bits (325), Expect(2) = 9e-040
Identities = 70/110 (63%), Positives = 73/110 (66%)
Frame = -3 / +2
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 230 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 409
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 410 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 559
Score = 118 bits (252), Expect(2) = 5e-027
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / -2
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 409 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 230
Score = 32.2 bits (64), Expect(2) = 9e-040
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -3 / +2
Query: 223 SRSASPLLRAWSTSTARS 170
S S P +RAWSTSTARS
Sbjct: 548 SASPGPAVRAWSTSTARS 601
Score = 31.8 bits (63), Expect(2) = 3e-052
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3 / -3
Query: 171 LRAVLVDHALSSGDAERE 224
LRAVLVDHAL++G E E
Sbjct: 600 LRAVLVDHALTAGPGEAE 547
Score = 24.9 bits (48), Expect(2) = 5e-027
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1 / -1
Query: 169 NCAPCWWTT 195
+CAPC WTT
Sbjct: 602 SCAPCSWTT 576
>gb|AV928004.1|AV928004 AV928004 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13j05 3', mRNA sequence
Length = 609
Score = 193 bits (417), Expect(2) = 4e-052
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +3 / -2
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 557 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 378
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 377 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 225
Score = 151 bits (325), Expect(2) = 8e-039
Identities = 70/110 (63%), Positives = 73/110 (66%)
Frame = -3 / +1
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 229 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 408
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 409 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 558
Score = 118 bits (252), Expect(2) = 8e-028
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / -1
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 408 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 229
Score = 31.3 bits (62), Expect(2) = 4e-052
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / -2
Query: 163 CRNCAPCWWTT 195
CR+CAPC WTT
Sbjct: 608 CRSCAPCSWTT 576
Score = 29.0 bits (57), Expect(2) = 8e-039
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 206 AAEGVVHQHGAQFLH 162
A VVH+HGAQ LH
Sbjct: 565 AVRAVVHEHGAQLLH 609
Score = 27.6 bits (54), Expect(2) = 8e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 162 MQKLRAVLVDH 194
MQKLRAVLVDH
Sbjct: 609 MQKLRAVLVDH 577
>gb|BI778700.2|BI778700 EBro01_SQ001_C06_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ001_C06 5', mRNA sequence
Length = 586
Score = 125 bits (268), Expect(3) = 5e-051
Identities = 49/107 (45%), Positives = 70/107 (65%)
Frame = +3 / +2
Query: 195 ALSSGDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYR 374
A G+ E S+F+++ +FE+ +RA LP+ GT NRI D RS+PLY+
Sbjct: 266 ANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQ 445
Query: 375 FVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWD 515
FVR+ G +LTGEK +SPGEE NKV + +++ K +DP+LECLKEW+
Sbjct: 446 FVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWN 586
Score = 83.1 bits (175), Expect(2) = 1e-025
Identities = 48/112 (42%), Positives = 54/112 (48%)
Frame = -3 / -2
Query: 511 HSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNERLSAIRLA 332
HSLRHSS GS L M +TL SSPGD FSPVR + P + RT SG ER S IRL
Sbjct: 582 HSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLG 403
Query: 331 TGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASPLLRAWSTSTA 176
VP SN L K E SR+ SP A + ST+
Sbjct: 402 ASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSPLASACSTS 247
Score = 72.1 bits (151), Expect(3) = 5e-051
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = +2 / +2
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
+N V QVAKK L+MN G L ARF EK+L++AIDREAVF YA+D S + P
Sbjct: 68 RNCVMQVAKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYP 223
Score = 53.3 bits (110), Expect(2) = 1e-025
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -1 / -2
Query: 126 YVNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVFL 1
Y NTASRS+A SFS KRA+ R P FM+ FLAT +T FL
Sbjct: 192 YANTASRSIAVSRSFSQKRAMWRPPMLFMLRVFLATCITQFL 67
Score = 42.3 bits (86), Expect(3) = 5e-051
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3 / +2
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQKLRAVLV+HAL++GD ER
Sbjct: 224 LMQKLRAVLVEHALANGDGER 286
>gb|AL503927.1|AL503927 AL503927 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03O01T 5', mRNA sequence
Length = 418
Score = 113 bits (242), Expect(3) = 7e-051
Identities = 47/75 (62%), Positives = 56/75 (74%)
Frame = +3 / +1
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 193 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 372
Query: 387 ELGCVFLTGEKLKSP 431
ELGCV+LTGEKL SP
Sbjct: 373 ELGCVYLTGEKLLSP 417
Score = 86.3 bits (182), Expect(3) = 4e-035
Identities = 42/75 (56%), Positives = 44/75 (58%)
Frame = -3 / -3
Query: 430 GDLSFSPVRNTQPSSWRTKRYSGNERLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSN 251
GD SFSPVR TQPSS RTKRYSGN+ LS IRL GAVP SN
Sbjct: 416 GDSSFSPVRYTQPSSSRTKRYSGNDLLSLIRLGMGAVPFSKATRAASISRGRADRSSSSN 237
Query: 250 LVILEKTEGSRSASP 206
L+ILE T S SASP
Sbjct: 236 LLILENTVASLSASP 192
Score = 85.4 bits (180), Expect(3) = 7e-051
Identities = 36/46 (78%), Positives = 42/46 (91%)
Frame = +2 / +1
Query: 20 VAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
V+ KVLTMNP+GDLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 1 VSXKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 138
Score = 57.4 bits (119), Expect(3) = 4e-035
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = -1 / -3
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVST 31
+NTASRSMA M FSLKRALERSP GFMVST
Sbjct: 104 LNTASRSMAVMRLFSLKRALERSPVGFMVST 12
Score = 42.8 bits (87), Expect(3) = 4e-035
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -3
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 203 SASPGPAVRAWSTSTARSFCIS 138
Score = 40.5 bits (82), Expect(3) = 7e-051
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 139 LMQKLRAVLVDHALTAGPGEAE 204
>gb|BG310118.1|BG310118 HVSMEc0016N14f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016N14f, mRNA sequence
Length = 809
Score = 137 bits (293), Expect(3) = 1e-050
Identities = 53/113 (46%), Positives = 75/113 (66%)
Frame = +3 / +1
Query: 195 ALSSGDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYR 374
A G+ E S+F+++ +FE+ +RA LP+ GT NRI D RS+PLY+
Sbjct: 172 ANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQ 351
Query: 375 FVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
FVR+ G +LTGEK +SPGEE NKV + +++ K +DP+LECLKEW+G PLP+
Sbjct: 352 FVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPL 510
Score = 90.0 bits (190), Expect(2) = 1e-025
Identities = 51/118 (43%), Positives = 57/118 (48%)
Frame = -3 / -1
Query: 529 GSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNERL 350
G G P HSLRHSS GS L M +TL SSPGD FSPVR + P + RT SG ER
Sbjct: 506 GRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQ 327
Query: 349 SAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASPLLRAWSTSTA 176
S IRL VP SN L K E SR+ SP A + ST+
Sbjct: 326 SLIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSPLASACSTS 153
Score = 59.3 bits (123), Expect(3) = 1e-050
Identities = 25/43 (58%), Positives = 31/43 (72%)
Frame = +2 / +1
Query: 29 KVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
K L+MN G L ARF EK+L++AIDREAVF YA+D S + P
Sbjct: 1 KTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYP 129
Score = 46.4 bits (95), Expect(2) = 1e-025
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3 / -3
Query: 157 RQAGAGRVLRVREHGLAVDGGDELLLAEA 71
R GA RV+RVREH LAVD G ++LLAEA
Sbjct: 129 RVVGAARVVRVREHRLAVDRGQQILLAEA 43
Score = 42.3 bits (86), Expect(3) = 1e-050
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQKLRAVLV+HAL++GD ER
Sbjct: 130 LMQKLRAVLVEHALANGDGER 192
>gb|AV919005.1|AV919005 AV919005 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22p22 3', mRNA sequence
Length = 572
Score = 193 bits (417), Expect(2) = 2e-050
Identities = 77/111 (69%), Positives = 90/111 (81%)
Frame = +3 / -1
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQ 386
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+
Sbjct: 536 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 357
Query: 387 ELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 356 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 204
Score = 151 bits (325), Expect(2) = 5e-038
Identities = 70/110 (63%), Positives = 73/110 (66%)
Frame = -3 / +1
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 208 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 387
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
LS IRL GAVP SNL+ILE T S SASP
Sbjct: 388 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 537
Score = 118 bits (252), Expect = 5e-026
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / -3
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 387 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 208
Score = 26.3 bits (51), Expect(2) = 5e-038
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3 / +1
Query: 223 SRSASPLLRAWSTST 179
S S P +RAWSTST
Sbjct: 526 SASPGPAVRAWSTST 570
Score = 25.8 bits (50), Expect(2) = 2e-050
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / -1
Query: 180 VLVDHALSSGDAERE 224
VLVDHAL++G E E
Sbjct: 569 VLVDHALTAGPGEAE 525
>gb|BJ467713.1|BJ467713 BJ467713 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29i14 3', mRNA sequence
Length = 595
Score = 122 bits (260), Expect(3) = 6e-050
Identities = 49/110 (44%), Positives = 70/110 (63%)
Frame = +3 / -3
Query: 195 ALSSGDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYR 374
A G+ E S+F+++ +FE+ +RA LP+ GT NRI D RS+PLY+
Sbjct: 362 ANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQ 183
Query: 375 FVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKP 524
FVR+ G +LTGEK +SPGEE NKV + +++ K +DP+LECLKE +P
Sbjct: 182 FVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKE*TARP 33
Score = 84.0 bits (177), Expect(2) = 7e-026
Identities = 50/122 (40%), Positives = 57/122 (46%)
Frame = -3 / +1
Query: 541 LMLMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSG 362
L+ G HSLRHSS GS L M +TL SSPGD FSPVR + P + RT SG
Sbjct: 16 LLAEWQGRAVHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG 195
Query: 361 NERLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASPLLRAWSTS 182
ER S IRL VP SN L K E SR+ SP A + S
Sbjct: 196 *ERQSLIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSPLASACS 375
Query: 181 TA 176
T+
Sbjct: 376 TS 381
Score = 72.1 bits (151), Expect(3) = 6e-050
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = +2 / -3
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
+N V QVAKK L+MN G L ARF EK+L++AIDREAVF YA+D S + P
Sbjct: 560 RNCVMQVAKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYP 405
Score = 53.3 bits (110), Expect(2) = 7e-026
Identities = 25/42 (59%), Positives = 29/42 (69%)
Frame = -1 / +1
Query: 126 YVNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVFL 1
Y NTASRS+A SFS KRA+ R P FM+ FLAT +T FL
Sbjct: 436 YANTASRSIAVSRSFSQKRAMWRPPMLFMLRVFLATCITQFL 561
Score = 42.3 bits (86), Expect(3) = 6e-050
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3 / -3
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQKLRAVLV+HAL++GD ER
Sbjct: 404 LMQKLRAVLVEHALANGDGER 342
>gb|BQ767217.1|BQ767217 EBro08_SQ008_E10_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_E10 5', mRNA sequence
Length = 511
Score = 149 bits (319), Expect(3) = 1e-049
Identities = 59/104 (56%), Positives = 78/104 (75%)
Frame = +3 / +1
Query: 222 EPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCV 401
E SVF+++ FE+E+RAVLP+ GTA NRI + RS+PLYRFVR+ELG
Sbjct: 160 ETSVFAKLATFEQEVRAVLPKEVEAARSAVENGTAAQQNRITECRSYPLYRFVRKELGTE 339
Query: 402 FLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
+LTGEK +SPGEE +KVF+ ++QGK +D +LECLKEW+G+PLPI
Sbjct: 340 YLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPI 471
Score = 100 bits (214), Expect(2) = 1e-023
Identities = 52/119 (43%), Positives = 60/119 (50%)
Frame = -3 / -3
Query: 532 MGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNER 353
+G G P HSLRHS S LPW M NTL SSPGDL FSPV+ + PSS RT R SG +R
Sbjct: 470 IGRGSPFHSLRHSRSASMCLPWFMATNTLSTSSPGDLVFSPVKYSVPSSLRTNR*SGYDR 291
Query: 352 LSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASPLLRAWSTSTA 176
S IR AVP SN+ L T+ S S S A + ST+
Sbjct: 290 HSVIRFCCAAVPFSTALLAASTSFGSTARTSCSNVASLANTDVSTSCSASPLAKACSTS 114
Score = 46.4 bits (95), Expect(3) = 1e-049
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +2 / +1
Query: 68 ARFSEKELISAIDREAVFTYAEDAASASLP 157
ARF EK+L+ IDREAVF YA D SA+ P
Sbjct: 1 ARFCEKDLLLTIDREAVFAYANDPCSANYP 90
Score = 40.0 bits (81), Expect(3) = 1e-049
Identities = 15/22 (68%), Positives = 21/22 (95%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQK+RAVLV+HAL++G+AE +
Sbjct: 91 LMQKMRAVLVEHALANGEAEHD 156
Score = 28.6 bits (56), Expect(2) = 1e-023
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -1 / -3
Query: 126 YVNTASRSMAEMSSFSLKR 70
Y NTASRS+ SFS KR
Sbjct: 59 YANTASRSIVSRRSFSQKR 3
>gb|BU989823.1|BU989823 HF22M18r HF Hordeum vulgare subsp. vulgare cDNA clone HF22M18
5-PRIME, mRNA sequence
Length = 592
Score = 137 bits (293), Expect(4) = 5e-049
Identities = 53/113 (46%), Positives = 75/113 (66%)
Frame = +3 / +1
Query: 195 ALSSGDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYR 374
A G+ E S+F+++ +FE+ +RA LP+ GT NRI D RS+PLY+
Sbjct: 223 ANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQ 402
Query: 375 FVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
FVR+ G +LTGEK +SPGEE NKV + +++ K +DP+LECLKEW+G PLP+
Sbjct: 403 FVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPL 561
Score = 90.0 bits (190), Expect(2) = 1e-025
Identities = 51/118 (43%), Positives = 57/118 (48%)
Frame = -3 / -3
Query: 529 GSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNERL 350
G G P HSLRHSS GS L M +TL SSPGD FSPVR + P + RT SG ER
Sbjct: 557 GRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQ 378
Query: 349 SAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASPLLRAWSTSTA 176
S IRL VP SN L K E SR+ SP A + ST+
Sbjct: 377 SLIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSPLASACSTS 204
Score = 48.7 bits (100), Expect(4) = 5e-049
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2 / +1
Query: 59 LSSARFSEKELISAIDREAVFTYAEDAASASLP 157
L ARF EK+L++AIDREAVF YA+D S + P
Sbjct: 82 LHIARFCEKDLLTAIDREAVFAYADDPCSPNYP 180
Score = 46.4 bits (95), Expect(2) = 1e-025
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3 / -2
Query: 157 RQAGAGRVLRVREHGLAVDGGDELLLAEA 71
R GA RV+RVREH LAVD G ++LLAEA
Sbjct: 180 RVVGAARVVRVREHRLAVDRGQQILLAEA 94
Score = 42.3 bits (86), Expect(4) = 5e-049
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQKLRAVLV+HAL++GD ER
Sbjct: 181 LMQKLRAVLVEHALANGDGER 243
Score = 23.1 bits (44), Expect(4) = 5e-049
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1 / +2
Query: 1 QEHGDPGGQEGADHEPLG 54
+E D GGQE +HE G
Sbjct: 23 EELRDAGGQEDPEHEQHG 76
>gb|BU990169.1|BU990169 HF24E14r HF Hordeum vulgare subsp. vulgare cDNA clone HF24E14
5-PRIME, mRNA sequence
Length = 592
Score = 137 bits (293), Expect(4) = 5e-049
Identities = 53/113 (46%), Positives = 75/113 (66%)
Frame = +3 / +1
Query: 195 ALSSGDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYR 374
A G+ E S+F+++ +FE+ +RA LP+ GT NRI D RS+PLY+
Sbjct: 223 ANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQ 402
Query: 375 FVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
FVR+ G +LTGEK +SPGEE NKV + +++ K +DP+LECLKEW+G PLP+
Sbjct: 403 FVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPL 561
Score = 90.0 bits (190), Expect(2) = 1e-025
Identities = 51/118 (43%), Positives = 57/118 (48%)
Frame = -3 / -3
Query: 529 GSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNERL 350
G G P HSLRHSS GS L M +TL SSPGD FSPVR + P + RT SG ER
Sbjct: 557 GRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQ 378
Query: 349 SAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASPLLRAWSTSTA 176
S IRL VP SN L K E SR+ SP A + ST+
Sbjct: 377 SLIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSPLASACSTS 204
Score = 48.7 bits (100), Expect(4) = 5e-049
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2 / +1
Query: 59 LSSARFSEKELISAIDREAVFTYAEDAASASLP 157
L ARF EK+L++AIDREAVF YA+D S + P
Sbjct: 82 LHIARFCEKDLLTAIDREAVFAYADDPCSPNYP 180
Score = 46.4 bits (95), Expect(2) = 1e-025
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3 / -2
Query: 157 RQAGAGRVLRVREHGLAVDGGDELLLAEA 71
R GA RV+RVREH LAVD G ++LLAEA
Sbjct: 180 RVVGAARVVRVREHRLAVDRGQQILLAEA 94
Score = 42.3 bits (86), Expect(4) = 5e-049
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQKLRAVLV+HAL++GD ER
Sbjct: 181 LMQKLRAVLVEHALANGDGER 243
Score = 23.1 bits (44), Expect(4) = 5e-049
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1 / +2
Query: 1 QEHGDPGGQEGADHEPLG 54
+E D GGQE +HE G
Sbjct: 23 EELRDAGGQEDPEHEQHG 76
>gb|BF264601.3|BF264601 HV_CEa0009N21f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009N21f, mRNA sequence
Length = 872
Score = 144 bits (308), Expect(2) = 5e-048
Identities = 58/113 (51%), Positives = 80/113 (70%)
Frame = +3 / +1
Query: 195 ALSSGDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYR 374
A + + E SVF+++ FE+ELRA+LP+ GTA NRI + RS+PLYR
Sbjct: 298 ANGEAERDVETSVFAKLAVFEQELRAMLPKEVEAARSAVENGTATQQNRITECRSYPLYR 477
Query: 375 FVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
FVR+ELG +LTGEK +SPGEE +KVF+ +++GK +D +LECLK W+G+PLPI
Sbjct: 478 FVRKELGTEYLTGEKTRSPGEEVDKVFVAMNKGKHIDALLECLKGWNGEPLPI 636
Score = 85.4 bits (180), Expect(2) = 1e-022
Identities = 49/118 (41%), Positives = 56/118 (47%)
Frame = -3 / -1
Query: 532 MGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNER 353
+G G P LRHSS S LP + NTL SSPGDL FSPV+ + PSS RT R SG +R
Sbjct: 635 IGRGSPFQPLRHSSSASMCLPLFIATNTLSTSSPGDLVFSPVKYSVPSSLRTNR*SGYDR 456
Query: 352 LSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASPLLRAWSTST 179
S IR AVP SN L T+ S S S A + ST
Sbjct: 455 HSVIRFCCVAVPFSTALRAASTSFGNIARSSCSNTASLANTDVSTSRSASPLAKACST 282
Score = 67.5 bits (141), Expect(2) = 5e-048
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
K+ V VA+K L+ N +G L SARF EK+L+ IDREAVF YA+D SA+ P
Sbjct: 100 KSCVKTVARKTLSTNSNGHLHSARFCEKDLLLTIDREAVFAYADDPCSANYP 255
Score = 40.9 bits (83), Expect(2) = 1e-022
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = -1 / -1
Query: 120 NTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVFL 1
NTASRS+ SFS KRAL R P ++S FLAT T L
Sbjct: 218 NTASRSIVRRRSFSQKRALCRWPLLLVLSVFLATVFTQLL 99
>gb|CB880955.1|CB880955 HM08F11w HM Hordeum vulgare subsp. vulgare cDNA clone HM08F11
3-PRIME, mRNA sequence
Length = 596
Score = 191 bits (411), Expect = 6e-048
Identities = 76/110 (69%), Positives = 89/110 (80%)
Frame = +3 / -3
Query: 210 DAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQE 389
+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+E
Sbjct: 594 EAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVREE 415
Query: 390 LGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
LGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 414 LGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 265
Score = 148 bits (318), Expect = 4e-035
Identities = 69/109 (63%), Positives = 72/109 (66%)
Frame = -3 / +2
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 269 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 448
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSAS 209
LS IRL GAVP SNL+ILE T S SAS
Sbjct: 449 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSAS 595
Score = 118 bits (252), Expect = 5e-026
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / -2
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 448 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 269
>gb|AV921319.1|AV921319 AV921319 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23a16 3', mRNA sequence
Length = 586
Score = 154 bits (331), Expect(3) = 1e-047
Identities = 62/105 (59%), Positives = 78/105 (74%)
Frame = +3 / -2
Query: 222 EPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCV 401
E SVF ++ KFE+EL A LPQ GTA NRI D RS+PLYRFVR+ELG V
Sbjct: 447 ETSVFGKVAKFEQELCATLPQEVEAARGAVENGTAAEPNRIVDCRSYPLYRFVREELGTV 268
Query: 402 FLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPIN 536
+LTGEK +SPGEE +KVF+ ++QGK +D +LECLKEW+G+PLPI+
Sbjct: 267 YLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIS 133
Score = 105 bits (224), Expect(2) = 2e-024
Identities = 55/120 (45%), Positives = 61/120 (50%)
Frame = -3 / +2
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
L+G G P HSLRHSS S LPW M NTL SSPGD FSPV+ T PSS RT RY G +
Sbjct: 134 LIGRGSPFHSLRHSSSASMCLPWFMATNTLSTSSPGDRVFSPVKYTVPSSSRTNRYRGYD 313
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASPLLRAWSTSTA 176
R S IR + AVP SNL L TE S S A + ST+
Sbjct: 314 RQSTIRFGSAAVPFSTAPLAASTS*GSVAQSSCSNLATLPNTEVSTLRSASPLARACSTS 493
Score = 39.6 bits (80), Expect(3) = 1e-047
Identities = 15/21 (71%), Positives = 21/21 (100%)
Frame = +3 / -2
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LM+K+RAVLV+HAL++G+AER
Sbjct: 516 LMKKMRAVLVEHALANGEAER 454
Score = 34.5 bits (69), Expect(3) = 1e-047
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2 / -2
Query: 92 ISAIDREAVFTYAEDAASASLP 157
+ IDREAVF YA+D SA+ P
Sbjct: 582 LQTIDREAVFAYADDPCSANYP 517
Score = 26.7 bits (52), Expect(2) = 2e-024
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3 / +1
Query: 157 RQAGAGRVLRVREHGLAVD 101
R GA RV+ +R+H LAVD
Sbjct: 517 RVVGAARVVCIRKHCLAVD 573
>gb|BQ765219.1|BQ765219 EBro03_SQ006_F15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_F15 5', mRNA sequence
Length = 714
Score = 144 bits (309), Expect(2) = 4e-047
Identities = 58/113 (51%), Positives = 80/113 (70%)
Frame = +3 / +2
Query: 195 ALSSGDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYR 374
A + + E SVF+++ FE+ELRA+LP+ GTA NRI + RS+PLYR
Sbjct: 185 ANGEAERDVETSVFAKLAMFEQELRAMLPKEVEAARSAVENGTATQQNRITECRSYPLYR 364
Query: 375 FVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
FVR+ELG +LTGEK +SPGEE +KVF+ +++GK +D +LECLK W+G+PLPI
Sbjct: 365 FVRKELGTEYLTGEKTRSPGEEVDKVFVAMNKGKHIDALLECLKGWNGEPLPI 523
Score = 86.8 bits (183), Expect(2) = 1e-022
Identities = 49/118 (41%), Positives = 57/118 (48%)
Frame = -3 / -1
Query: 532 MGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNER 353
+G G P LRHSS S LP + NTL SSPGDL FSPV+ + PSS RT R SG +R
Sbjct: 522 IGRGSPFQPLRHSSSASMCLPLFIATNTLSTSSPGDLVFSPVKYSVPSSLRTNR*SGYDR 343
Query: 352 LSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASPLLRAWSTST 179
S IR AVP SN+ L T+ S S S A + ST
Sbjct: 342 HSVIRFCCVAVPFSTALRAASTSFGNIARSSCSNMASLANTDVSTSRSASPLAKACST 169
Score = 64.3 bits (134), Expect(2) = 4e-047
Identities = 27/46 (58%), Positives = 34/46 (73%)
Frame = +2 / +2
Query: 20 VAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
VA+K L+ N +G L SARF EK+L+ IDREAVF YA+D SA+ P
Sbjct: 5 VARKTLSTNSNGHLHSARFCEKDLLLTIDREAVFAYADDPCSANYP 142
Score = 39.6 bits (80), Expect(2) = 1e-022
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -1 / -1
Query: 120 NTASRSMAEMSSFSLKRALERSPEGFMVSTFLAT 19
NTASRS+ SFS KRAL R P ++S FLAT
Sbjct: 105 NTASRSIVRRRSFSQKRALCRWPLLLVLSVFLAT 4
>gb|BQ768383.1|BQ768383 EBro08_SQ011_F13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_F13 5', mRNA sequence
Length = 513
Score = 137 bits (293), Expect(3) = 8e-047
Identities = 53/113 (46%), Positives = 75/113 (66%)
Frame = +3 / +3
Query: 195 ALSSGDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYR 374
A G+ E S+F+++ +FE+ +RA LP+ GT NRI D RS+PLY+
Sbjct: 132 ANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQ 311
Query: 375 FVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
FVR+ G +LTGEK +SPGEE NKV + +++ K +DP+LECLKEW+G PLP+
Sbjct: 312 FVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPL 470
Score = 90.0 bits (190), Expect(2) = 1e-025
Identities = 51/118 (43%), Positives = 57/118 (48%)
Frame = -3 / -3
Query: 529 GSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNERL 350
G G P HSLRHSS GS L M +TL SSPGD FSPVR + P + RT SG ER
Sbjct: 466 GRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQ 287
Query: 349 SAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASPLLRAWSTSTA 176
S IRL VP SN L K E SR+ SP A + ST+
Sbjct: 286 SLIRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRARSPSPLASACSTS 113
Score = 46.4 bits (95), Expect(2) = 1e-025
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3 / -2
Query: 157 RQAGAGRVLRVREHGLAVDGGDELLLAEA 71
R GA RV+RVREH LAVD G ++LLAEA
Sbjct: 89 RVVGAARVVRVREHRLAVDRGQQILLAEA 3
Score = 46.4 bits (95), Expect(3) = 8e-047
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +2 / +3
Query: 71 RFSEKELISAIDREAVFTYAEDAASASLP 157
RF EK+L++AIDREAVF YA+D S + P
Sbjct: 3 RFCEKDLLTAIDREAVFAYADDPCSPNYP 89
Score = 42.3 bits (86), Expect(3) = 8e-047
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3 / +3
Query: 159 LMQKLRAVLVDHALSSGDAER 221
LMQKLRAVLV+HAL++GD ER
Sbjct: 90 LMQKLRAVLVEHALANGDGER 152
>gb|AV919053.1|AV919053 AV919053 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4d18 3', mRNA sequence
Length = 717
Score = 145 bits (311), Expect(3) = 1e-046
Identities = 57/101 (56%), Positives = 76/101 (75%)
Frame = +3 / -3
Query: 231 VFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFLT 410
VF+++ FE+E+RAVLP+ GTA NRI + RS+PLYRFVR+ELG +LT
Sbjct: 538 VFAKLATFEQEVRAVLPKEVEAARSAVENGTAAQQNRITECRSYPLYRFVRKELGTEYLT 359
Query: 411 GEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
GEK +SPGEE +KVF+ ++QGK +D +LECLKEW+G+PLPI
Sbjct: 358 GEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPI 236
Score = 95.0 bits (201), Expect(3) = 4e-028
Identities = 46/101 (45%), Positives = 51/101 (50%)
Frame = -3 / +3
Query: 532 MGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNER 353
+G G P HSLRHS S LPW M NTL SSPGDL FSPV+ + PSS RT R SG +R
Sbjct: 237 IGRGSPFHSLRHSRSASMCLPWFMATNTLSTSSPGDLVFSPVKYSVPSSLRTNR*SGYDR 416
Query: 352 LSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKT 230
S IR AVP SN+ L T
Sbjct: 417 HSVIRFCCAAVPFSTALLAASTSFGSTARTSCSNVASLANT 539
Score = 40.0 bits (81), Expect(3) = 1e-046
Identities = 15/22 (68%), Positives = 21/22 (95%)
Frame = +3 / -2
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQK+RAVLV+HAL++G+AE +
Sbjct: 617 LMQKMRAVLVEHALANGEAEHD 552
Score = 40.0 bits (81), Expect(3) = 1e-046
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2 / -3
Query: 62 SSARFSEKELISAIDREAVFTYAEDAASASLP 157
++ARF EK+ + IDREAVF YAE LP
Sbjct: 715 TTARFCEKDXLLTIDREAVFAYAE*PMQRELP 620
Score = 36.3 bits (73), Expect(3) = 4e-028
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = -3 / +1
Query: 223 SRSASPLLRAWSTSTARSFCISRQAGAGRVL 131
S SASPL +A STSTAR FC+S A V+
Sbjct: 553 SCSASPLAKACSTSTARIFCMSGVVRAAWVI 645
Score = 31.3 bits (62), Expect(3) = 4e-028
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -1 / +3
Query: 126 YVNTASRSMAEMSSFSLKRAL 64
Y NTASRS+ SFS KRA+
Sbjct: 651 YANTASRSIVSRXSFSQKRAV 713
>gb|AV931809.1|AV931809 AV931809 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26e13 3', mRNA sequence
Length = 564
Score = 186 bits (401), Expect = 1e-046
Identities = 74/106 (69%), Positives = 86/106 (81%)
Frame = +3 / -3
Query: 222 EPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCV 401
E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+ELGCV
Sbjct: 562 EATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVREELGCV 383
Query: 402 FLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 382 YLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 245
Score = 144 bits (308), Expect = 9e-034
Identities = 66/105 (62%), Positives = 69/105 (65%)
Frame = -3 / +3
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 249 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 428
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGS 221
LS IRL GAVP SNL+ILE T S
Sbjct: 429 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVAS 563
Score = 118 bits (252), Expect = 5e-026
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / -2
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 428 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 249
>gb|AV930308.1|AV930308 AV930308 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd21p01 3', mRNA sequence
Length = 560
Score = 184 bits (397), Expect = 5e-046
Identities = 73/104 (70%), Positives = 85/104 (81%)
Frame = +3 / -1
Query: 228 SVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFL 407
+VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+ELGCV+L
Sbjct: 557 TVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVREELGCVYL 378
Query: 408 TGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
TGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 377 TGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 246
Score = 143 bits (306), Expect = 2e-033
Identities = 65/102 (63%), Positives = 68/102 (66%)
Frame = -3 / +1
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 250 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 429
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKT 230
LS IRL GAVP SNL+ILE T
Sbjct: 430 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENT 555
Score = 118 bits (252), Expect = 5e-026
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / -3
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 429 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 250
>gb|AV912724.1|AV912724 AV912724 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10a01 5', mRNA sequence
Length = 618
Score = 99.1 bits (210), Expect(4) = 6e-046
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KN VTQV+KKVLTMNP+GDLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 166 KNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 321
Score = 66.6 bits (139), Expect(5) = 5e-034
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -1 / -2
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVF 4
+NTASRSMA M FSLKRALERSP GFMVSTF T VT F
Sbjct: 287 LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVTQF 168
Score = 62.0 bits (129), Expect(4) = 6e-046
Identities = 27/57 (47%), Positives = 32/57 (56%)
Frame = +3 / +2
Query: 225 PSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELG 395
P R T LR+ LP+ GTAP+ N I +SRSFPLYRFVR+ELG
Sbjct: 395 PRCSPRSTSSRRSLRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVREELG 565
Score = 47.3 bits (97), Expect(5) = 9e-023
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1 / +3
Query: 1 QEHGDPGGQEGADHEPLGGPLQRALQREGAH 93
+E D G +EGADHEP PLQRALQRE H
Sbjct: 165 EELRDAGVEEGADHEPYRRPLQRALQREEPH 257
Score = 46.9 bits (96), Expect(5) = 5e-034
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = -3 / -1
Query: 397 QPSSWRTKRYSGNERLSAIRLATGAVP 317
+PSS RTKRYSGN+ LS IRL GAVP
Sbjct: 567 KPSSSRTKRYSGNDLLSLIRLGMGAVP 487
Score = 42.8 bits (87), Expect(5) = 5e-034
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -2
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 386 SASPGPAVRAWSTSTARSFCIS 321
Score = 40.5 bits (82), Expect(4) = 6e-046
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 322 LMQKLRAVLVDHALTAGPGEAE 387
Score = 39.1 bits (79), Expect(4) = 6e-046
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3 / +3
Query: 396 CVFLTGEKLKSPGEEC 443
CV+LTGEKL SPGEEC
Sbjct: 567 CVYLTGEKLLSPGEEC 614
Score = 36.8 bits (74), Expect(5) = 9e-023
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2 / +2
Query: 395 LRVPHRREAQVPRRGV 442
LRVPHRREA VPRRG+
Sbjct: 566 LRVPHRREAAVPRRGM 613
Score = 35.9 bits (72), Expect(5) = 5e-034
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -3 / -3
Query: 445 LHSSPGDLSFSPVRNTQ 395
+HSSPGD SFSPVR TQ
Sbjct: 616 VHSSPGDSSFSPVRYTQ 566
Score = 35.4 bits (71), Expect(5) = 9e-023
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3 / +1
Query: 207 GDAEREPSVFSRITKFEEEL 266
G+AE E +VFS+I KFEEEL
Sbjct: 376 GEAESEATVFSKINKFEEEL 435
Score = 31.8 bits (63), Expect(5) = 9e-023
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 160 *CRNCAPCWWTT 195
*CR+CAPC WTT
Sbjct: 323 *CRSCAPCSWTT 358
Score = 26.7 bits (52), Expect(5) = 9e-023
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 356 LVPAVPLRAPGARL 397
+VPAVPLR GARL
Sbjct: 526 VVPAVPLRPRGARL 567
Score = 24.9 bits (48), Expect(5) = 5e-034
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3 / -2
Query: 253 NLVILEKTEGSRSASP 206
NL+ILE T S SASP
Sbjct: 422 NLLILENTVASLSASP 375
>gb|BI959376.1|BI959376 HVSMEn0019H01f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019H01f, mRNA sequence
Length = 613
Score = 183 bits (395), Expect = 9e-046
Identities = 73/106 (68%), Positives = 85/106 (80%)
Frame = +3 / -3
Query: 222 EPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCV 401
EP FS+ITKF+EELR+ P+ GTAP+ N I +SRSFPLYRFVR+ELGCV
Sbjct: 611 EPPGFSQITKFKEELRSACPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVREELGCV 432
Query: 402 FLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
+LTGEKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 431 YLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 294
Score = 142 bits (304), Expect = 3e-033
Identities = 65/105 (61%), Positives = 67/105 (63%)
Frame = -3 / +1
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 298 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 477
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGS 221
LS IRL GAVP NLVI E GS
Sbjct: 478 LLSLIRLGMGAVPFSKATRAASISRGQADRSSSLNLVIWENPGGS 612
Score = 118 bits (252), Expect = 5e-026
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / -2
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 477 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 298
>gb|AV930975.1|AV930975 AV930975 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18b11 3', mRNA sequence
Length = 550
Score = 182 bits (392), Expect = 2e-045
Identities = 72/102 (70%), Positives = 83/102 (81%)
Frame = +3 / -1
Query: 234 FSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFVRQELGCVFLTG 413
FS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFVR+ELGCV+LTG
Sbjct: 550 FSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVREELGCVYLTG 371
Query: 414 EKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPINI 539
EKL SPGEEC KVFLGISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 370 EKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 245
Score = 140 bits (301), Expect = 8e-033
Identities = 64/100 (64%), Positives = 67/100 (67%)
Frame = -3 / +3
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 249 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 428
Query: 355 RLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILE 236
LS IRL GAVP SNL+ILE
Sbjct: 429 LLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILE 548
Score = 118 bits (252), Expect = 5e-026
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / -3
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 428 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 249
>gb|BQ765192.1|BQ765192 EBro03_SQ006_A15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_A15 5', mRNA sequence
Length = 617
Score = 144 bits (309), Expect(2) = 4e-045
Identities = 58/113 (51%), Positives = 80/113 (70%)
Frame = +3 / +1
Query: 195 ALSSGDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYR 374
A + + E SVF+++ FE+ELRA+LP+ GTA NRI + RS+PLYR
Sbjct: 169 ANGEAERDVETSVFAKLAMFEQELRAMLPKEVEAARSAVENGTATQQNRITECRSYPLYR 348
Query: 375 FVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLECLKEWDGKPLPI 533
FVR+ELG +LTGEK +SPGEE +KVF+ +++GK +D +LECLK W+G+PLPI
Sbjct: 349 FVRKELGTEYLTGEKTRSPGEEVDKVFVAMNKGKHIDALLECLKGWNGEPLPI 507
Score = 57.4 bits (119), Expect(2) = 4e-045
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +2 / +1
Query: 35 LTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
L+ N +G L SARF EK+L+ IDREAVF YA+D SA+ P
Sbjct: 4 LSTNSNGHLHSARFCEKDLLLTIDREAVFAYADDPCSANYP 126
>gb|BM372199.2|BM372199 EBro03_SQ004_E20_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_E20 5', mRNA sequence
Length = 521
Score = 156 bits (336), Expect(2) = 1e-044
Identities = 60/74 (81%), Positives = 68/74 (91%)
Frame = +3 / +1
Query: 318 GTAPVANRIADSRSFPLYRFVRQELGCVFLTGEKLKSPGEECNKVFLGISQGKLVDPMLE 497
GTAP+ N I +SRSFPLYRFVR+ELGCV+LTGEKL SPGEEC KVFLGISQ KL+DPMLE
Sbjct: 139 GTAPIPNLIKESRSFPLYRFVREELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLE 318
Query: 498 CLKEWDGKPLPINI 539
CLKEW+G+PLPIN+
Sbjct: 319 CLKEWNGEPLPINV 360
Score = 133 bits (286), Expect(2) = 3e-032
Identities = 58/73 (79%), Positives = 60/73 (82%)
Frame = -3 / -1
Query: 535 LMGSGLPSHSLRHSSMGSTSLPWLMPRNTLLHSSPGDLSFSPVRNTQPSSWRTKRYSGNE 356
LMG G P HSLRHSSMGS SL WLMPR TL+HSSPGD SFSPVR TQPSS RTKRYSGN+
Sbjct: 356 LMGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGND 177
Query: 355 RLSAIRLATGAVP 317
LS IRL GAVP
Sbjct: 176 LLSLIRLGMGAVP 138
Score = 118 bits (252), Expect = 5e-026
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2 / +3
Query: 356 LVPAVPLRAPGARLRVPHRREAQVPRRGVQQGVPRHQPGQARRPHARVPQGVGRQAAAHQ 535
+VPAVPLR GARLRVPHRREA VPRRG+ QG+PRHQP QA RPHARVPQGV R+A AHQ
Sbjct: 177 VVPAVPLRPRGARLRVPHRREAAVPRRGMHQGLPRHQPEQAHRPHARVPQGVERRAPAHQ 356
Score = 43.7 bits (89), Expect(2) = 1e-044
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +3 / +3
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQ 284
G+AE E +VFS+I KFEEELR+ LP+
Sbjct: 27 GEAESEATVFSKINKFEEELRSALPR 104
Score = 24.9 bits (48), Expect(2) = 3e-032
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3 / -2
Query: 253 NLVILEKTEGSRSASP 206
NL+ILE T S SASP
Sbjct: 73 NLLILENTVASLSASP 26
>gb|BI957553.1|BI957553 HVSMEn0010B19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010B19f, mRNA sequence
Length = 633
Score = 99.1 bits (210), Expect(3) = 1e-044
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +2 / +1
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KN VTQV+KKVLTMNP+GDLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 250 KNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 405
Score = 79.0 bits (166), Expect(3) = 1e-044
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = +3 / +1
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFV 380
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFV
Sbjct: 460 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFV 633
Score = 66.6 bits (139), Expect(3) = 5e-029
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -1 / -2
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVF 4
+NTASRSMA M FSLKRALERSP GFMVSTF T VT F
Sbjct: 371 LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVTQF 252
Score = 56.5 bits (117), Expect(3) = 5e-029
Identities = 28/58 (48%), Positives = 30/58 (51%)
Frame = -3 / -2
Query: 379 TKRYSGNERLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
TKRYSGN+ LS IRL GAVP SNL+ILE T S SASP
Sbjct: 632 TKRYSGNDLLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 459
Score = 42.8 bits (87), Expect(3) = 5e-029
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -2
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 470 SASPGPAVRAWSTSTARSFCIS 405
Score = 40.5 bits (82), Expect(3) = 1e-044
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 406 LMQKLRAVLVDHALTAGPGEAE 471
>gb|AL505417.1|AL505417 AL505417 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08G13V 5', mRNA sequence
Length = 689
Score = 99.1 bits (210), Expect(3) = 2e-044
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = +2 / +2
Query: 2 KNTVTQVAKKVLTMNPSGDLSSARFSEKELISAIDREAVFTYAEDAASASLP 157
KN VTQV+KKVLTMNP+GDLSSARFSEK LI+AIDREAVF+YA+DA SA+ P
Sbjct: 221 KNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 376
Score = 78.5 bits (165), Expect(3) = 2e-044
Identities = 34/58 (58%), Positives = 41/58 (70%)
Frame = +3 / +2
Query: 207 GDAEREPSVFSRITKFEEELRAVLPQXXXXXXXXXXXGTAPVANRIADSRSFPLYRFV 380
G+AE E +VFS+I KFEEELR+ LP+ GTAP+ N I +SRSFPLYRFV
Sbjct: 431 GEAESEATVFSKINKFEEELRSALPREIEAXRVAFENGTAPIPNLIKESRSFPLYRFV 604
Score = 66.6 bits (139), Expect(3) = 6e-029
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -1 / -3
Query: 123 VNTASRSMAEMSSFSLKRALERSPEGFMVSTFLATWVTVF 4
+NTASRSMA M FSLKRALERSP GFMVSTF T VT F
Sbjct: 342 LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDTCVTQF 223
Score = 56.1 bits (116), Expect(3) = 6e-029
Identities = 29/58 (50%), Positives = 31/58 (53%)
Frame = -3 / -3
Query: 379 TKRYSGNERLSAIRLATGAVPXXXXXXXXXXXXXXXXXXXXSNLVILEKTEGSRSASP 206
TKRYSGN+ LS IRL GAVP SNL+ILE T S SASP
Sbjct: 603 TKRYSGNDLLSLIRLGMGAVPFSKATRXASISRGRADRSSSSNLLILENTVASLSASP 430
Score = 42.8 bits (87), Expect(3) = 6e-029
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -3 / -3
Query: 223 SRSASPLLRAWSTSTARSFCIS 158
S S P +RAWSTSTARSFCIS
Sbjct: 441 SASPGPAVRAWSTSTARSFCIS 376
Score = 40.5 bits (82), Expect(3) = 2e-044
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 159 LMQKLRAVLVDHALSSGDAERE 224
LMQKLRAVLVDHAL++G E E
Sbjct: 377 LMQKLRAVLVDHALTAGPGEAE 442
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 302,674,139
Number of Sequences: 312970
Number of extensions: 4563007
Number of successful extensions: 75500
Number of sequences better than 1.0e-020: 182
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 10189104838
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)