TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804904.2.1
(690 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM377475.2|BM377475 EBem04_SQ003_D24_R embryo, 12 DPA, n... 290 5e-078
gb|BM377699.2|BM377699 EBem04_SQ003_O16_R embryo, 12 DPA, n... 290 5e-078
gb|BI780787.2|BI780787 EBes01_SQ002_D08_R embryo sac, 4-6 D... 290 5e-078
gb|BM101365.2|BM101365 EBpi01_SQ003_K07_R pistil, 1 DPA, no... 290 5e-078
gb|BM370305.2|BM370305 EBro08_SQ003_M14_R root, 3 week, dro... 290 5e-078
gb|BQ758693.1|BQ758693 EBma07_SQ002_E13_R maternal, 21 DPA,... 290 5e-078
gb|BQ762662.1|BQ762662 EBro02_SQ004_L15_R root, 3 week, hyd... 290 5e-078
gb|BQ764226.1|BQ764226 EBan01_SQ005_A12_R anther, yellow st... 290 5e-078
gb|BQ766935.1|BQ766935 EBro08_SQ007_D15_R root, 3 week, dro... 290 5e-078
gb|BQ768014.1|BQ768014 EBro08_SQ010_O11_R root, 3 week, dro... 290 5e-078
gb|BE421867.1|BE421867 HWM015cF.10r ITEC HWM Barley Leaf Li... 289 9e-078
gb|BE193624.2|BE193624 HVSMEh0082A09f Hordeum vulgare 5-45 ... 289 9e-078
gb|BE196257.2|BE196257 HVSMEh0091M19f Hordeum vulgare 5-45 ... 289 9e-078
gb|AW982424.3|AW982424 HVSMEg0003D18f Hordeum vulgare pre-a... 289 9e-078
gb|BE195642.3|BE195642 HVSMEh0090A15f Hordeum vulgare 5-45 ... 289 9e-078
gb|AV913899.1|AV913899 AV913899 K. Sato unpublished cDNA li... 289 9e-078
gb|BM816732.1|BM816732 HB02C05_T3.ab1 HB Hordeum vulgare su... 289 9e-078
gb|AJ460492.1|AJ460492 AJ460492 S00002 Hordeum vulgare subs... 289 9e-078
gb|AJ460495.1|AJ460495 AJ460495 S00002 Hordeum vulgare subs... 289 9e-078
gb|AJ460496.1|AJ460496 AJ460496 S00002 Hordeum vulgare subs... 289 9e-078
gb|BJ465123.1|BJ465123 BJ465123 K. Sato unpublished cDNA li... 289 9e-078
gb|BQ657976.1|BQ657976 HA06D06u HA Hordeum vulgare subsp. v... 289 9e-078
gb|BU972772.1|BU972772 HB22K20r BC Hordeum vulgare subsp. v... 289 9e-078
gb|BU982565.1|BU982565 HA26O23r HA Hordeum vulgare subsp. v... 289 9e-078
gb|BU983927.1|BU983927 HA31H16r HA Hordeum vulgare subsp. v... 289 9e-078
gb|BU989679.1|BU989679 HF22G11r HF Hordeum vulgare subsp. v... 289 9e-078
gb|BU994577.1|BU994577 HM07I06r HM Hordeum vulgare subsp. v... 289 9e-078
gb|CA008553.1|CA008553 HU11F06r HU Hordeum vulgare subsp. v... 289 9e-078
gb|CA011664.1|CA011664 HT03D07r HT Hordeum vulgare subsp. v... 289 9e-078
gb|CA017707.1|CA017707 HV05P22r HV Hordeum vulgare subsp. v... 289 9e-078
gb|CB883479.1|CB883479 HQ02G05w HQ Hordeum vulgare subsp. v... 289 9e-078
gb|CK124268.1|CK124268 BES1824108c13 BES1824 Hordeum vulgar... 289 9e-078
gb|BM371259.2|BM371259 EBma08_SQ002_A19_R maternal, 28 DPA,... 289 1e-077
gb|BG344422.1|BG344422 HVSMEg0009D14f Hordeum vulgare pre-a... 287 3e-077
gb|AJ460382.1|AJ460382 AJ460382 S00002 Hordeum vulgare subs... 287 3e-077
gb|BJ463077.1|BJ463077 BJ463077 K. Sato unpublished cDNA li... 287 3e-077
gb|BJ463126.1|BJ463126 BJ463126 K. Sato unpublished cDNA li... 287 3e-077
gb|BJ467579.1|BJ467579 BJ467579 K. Sato unpublished cDNA li... 287 3e-077
gb|BQ756834.1|BQ756834 EBem09_SQ003_O10_R embryo, 1 Day ger... 287 3e-077
gb|BQ761233.1|BQ761233 EBro04_SQ004_M16_R root, 3 week, sal... 287 3e-077
gb|BM377218.2|BM377218 EBem05_SQ004_H13_R embryo, 14 DPA, n... 286 6e-077
gb|BQ460332.1|BQ460332 HA06I23r HA Hordeum vulgare subsp. v... 286 1e-076
gb|BQ657133.1|BQ657133 HA09I10u HA Hordeum vulgare subsp. v... 286 1e-076
gb|BQ657240.1|BQ657240 HA09C02u HA Hordeum vulgare subsp. v... 286 1e-076
gb|BM377568.2|BM377568 EBem04_SQ003_I13_R embryo, 12 DPA, n... 286 1e-076
gb|BM376611.2|BM376611 EBem05_SQ002_L09_R embryo, 14 DPA, n... 286 1e-076
gb|BI780084.2|BI780084 EBma08_SQ001_F19_R maternal, 28 DPA,... 286 1e-076
gb|BM100980.2|BM100980 EBpi01_SQ002_H24_R pistil, 1 DPA, no... 286 1e-076
gb|BM101137.2|BM101137 EBpi01_SQ002_P21_R pistil, 1 DPA, no... 286 1e-076
gb|BM370559.2|BM370559 EBro08_SQ004_J13_R root, 3 week, dro... 286 1e-076
gb|BQ759446.1|BQ759446 EBpi01_SQ004_E14_R pistil, 1 DPA, no... 286 1e-076
gb|BQ764353.1|BQ764353 EBan01_SQ005_I17_R anther, yellow st... 286 1e-076
gb|BQ767264.1|BQ767264 EBro08_SQ008_M10_R root, 3 week, dro... 286 1e-076
gb|BU977241.1|BU977241 HA11B09u HA Hordeum vulgare subsp. v... 286 1e-076
gb|CA026267.1|CA026267 HZ55G16r HZ Hordeum vulgare subsp. v... 286 1e-076
gb|CA030768.1|CA030768 HX08B07r HX Hordeum vulgare subsp. v... 286 1e-076
gb|CB874514.1|CB874514 HX05H22w HX Hordeum vulgare subsp. v... 286 1e-076
gb|CV063549.1|CV063549 BNEL90e7 Barley EST endosperm librar... 286 1e-076
gb|CK123864.1|CK123864 BES1824105n20 BES1824 Hordeum vulgar... 286 1e-076
gb|BF622414.3|BF622414 HVSMEa0004C23f Hordeum vulgare seedl... 285 2e-076
gb|AV915789.1|AV915789 AV915789 K. Sato unpublished cDNA li... 285 2e-076
gb|CK125878.1|CK125878 BES1824111A1h09 BES1824 Hordeum vulg... 285 2e-076
gb|AW982785.3|AW982785 HVSMEg0004D09f Hordeum vulgare pre-a... 284 3e-076
gb|BE420961.1|BE420961 HWM004.D02 ITEC HWM Barley Leaf Libr... 284 4e-076
gb|BQ768753.1|BQ768753 EBro08_SQ012_H13_R root, 3 week, dro... 284 4e-076
gb|BF263456.3|BF263456 HV_CEa0006M17f Hordeum vulgare seedl... 283 6e-076
gb|BM097808.2|BM097808 EBem04_SQ002_M06_R embryo, 12 DPA, n... 283 6e-076
gb|BG368111.2|BG368111 HVSMEi0015L14f Hordeum vulgare 20 DA... 283 8e-076
gb|BQ470561.1|BQ470561 HX03F15r HX Hordeum vulgare subsp. v... 283 8e-076
gb|BM368114.2|BM368114 EBed01_SQ002_D13_R endosperm, 6 DPA,... 283 8e-076
gb|BM377528.2|BM377528 EBem04_SQ003_G14_R embryo, 12 DPA, n... 282 1e-075
gb|BQ759429.1|BQ759429 EBpi01_SQ004_B15_R pistil, 1 DPA, no... 282 1e-075
gb|BM369172.2|BM369172 EBem07_SQ002_M12_R embryo, 28 DPA, n... 281 2e-075
gb|CK125896.1|CK125896 BES1824111B1e11 BES1824 Hordeum vulg... 281 3e-075
gb|BM375212.2|BM375212 EBem06_SQ002_L01_R embryo, 21 DPA, n... 277 5e-074
gb|BM443909.2|BM443909 EBem09_SQ002_A06_R embryo, 1 Day ger... 277 5e-074
gb|BF254111.2|BF254111 HVSMEf0003A21f Hordeum vulgare seedl... 275 2e-073
gb|BU980099.1|BU980099 HA18J12r HA Hordeum vulgare subsp. v... 275 2e-073
gb|BU996456.1|BU996456 HM13K19r HM Hordeum vulgare subsp. v... 275 2e-073
gb|BJ468272.1|BJ468272 BJ468272 K. Sato unpublished cDNA li... 234 3e-073
gb|BF266984.3|BF266984 HV_CEa0016J21f Hordeum vulgare seedl... 273 8e-073
gb|BU974599.1|BU974599 HB28H15r BC Hordeum vulgare subsp. v... 272 1e-072
gb|BF628987.3|BF628987 HVSMEb0009H03f Hordeum vulgare seedl... 272 2e-072
gb|BM374957.1|BM374957 EBma05_SQ003_M17_R maternal, 12 DPA,... 272 2e-072
gb|BU982731.1|BU982731 HA27H03r HA Hordeum vulgare subsp. v... 266 2e-072
gb|CA029887.1|CA029887 HX05H22r HX Hordeum vulgare subsp. v... 266 2e-072
gb|BM370293.2|BM370293 EBro08_SQ003_L24_R root, 3 week, dro... 271 3e-072
gb|BM372616.2|BM372616 EBpi05_SQ003_H10_R pistil, 8 DPA, no... 270 4e-072
gb|AL505608.1|AL505608 AL505608 Hordeum vulgare Barke roots... 230 3e-070
gb|AL507449.1|AL507449 AL507449 Hordeum vulgare Barke devel... 264 5e-070
gb|AJ460493.1|AJ460493 AJ460493 S00002 Hordeum vulgare subs... 264 5e-070
gb|BJ464005.1|BJ464005 BJ464005 K. Sato unpublished cDNA li... 264 5e-070
gb|BI780475.2|BI780475 EBem08_SQ001_F11_R embryo, 40 DPA, n... 264 5e-070
gb|BI777120.2|BI777120 EBro03_SQ002_A15_R root, 3 week, wat... 264 5e-070
gb|BQ665383.1|BQ665383 HX03F15u HX Hordeum vulgare subsp. v... 263 7e-070
gb|BU980000.1|BU980000 HA18C20r HA Hordeum vulgare subsp. v... 261 3e-069
gb|CA004189.1|CA004189 HS16N13r HS Hordeum vulgare subsp. v... 261 3e-069
gb|BU998238.1|BU998238 HI10G19r HI Hordeum vulgare subsp. v... 257 4e-068
gb|BM096579.2|BM096579 EBma05_SQ001_M21_R maternal, 12 DPA,... 257 6e-068
gb|BI948923.1|BI948923 HVSMEl0011H19f Hordeum vulgare spike... 256 1e-067
gb|BQ459994.1|BQ459994 HA07I10r HA Hordeum vulgare subsp. v... 256 1e-067
gb|BQ657658.1|BQ657658 HA07I10u HA Hordeum vulgare subsp. v... 256 1e-067
gb|BI779133.2|BI779133 EBro01_SQ003_B18_R root, 3 week, hyd... 254 3e-067
gb|BQ754361.1|BQ754361 EBca01_SQ003_L10_R carpel, pre-anthe... 254 3e-067
gb|AV921513.1|AV921513 AV921513 K. Sato unpublished cDNA li... 193 3e-067
gb|BM376688.2|BM376688 EBem05_SQ002_O24_R embryo, 14 DPA, n... 152 2e-066
gb|BU989673.1|BU989673 HF22G05r HF Hordeum vulgare subsp. v... 251 3e-066
gb|CA005304.1|CA005304 HU11C14u HU Hordeum vulgare subsp. v... 251 4e-066
gb|CA008499.1|CA008499 HU11C14r HU Hordeum vulgare subsp. v... 251 4e-066
gb|CB875344.1|CB875344 HX08A07w HX Hordeum vulgare subsp. v... 251 4e-066
gb|CB859428.1|CB859428 HI10G19w HI Hordeum vulgare subsp. v... 246 8e-065
gb|BU985219.1|BU985219 HF06H23r HF Hordeum vulgare subsp. v... 243 6e-064
gb|CA016875.1|CA016875 HV05P22u HV Hordeum vulgare subsp. v... 243 6e-064
gb|AJ460383.1|AJ460383 AJ460383 S00002 Hordeum vulgare subs... 243 8e-064
gb|CB880518.1|CB880518 HM06M18w HM Hordeum vulgare subsp. v... 243 8e-064
gb|BQ754589.1|BQ754589 EBed01_SQ003_D22_R endosperm, 6 DPA,... 240 5e-063
gb|CA005252.1|CA005252 HU11F06u HU Hordeum vulgare subsp. v... 238 2e-062
gb|BI778891.2|BI778891 EBro01_SQ001_O16_R root, 3 week, hyd... 237 5e-062
gb|BJ464965.1|BJ464965 BJ464965 K. Sato unpublished cDNA li... 234 3e-061
gb|AL502869.1|AL502869 AL502869 Hordeum vulgare Barke roots... 223 1e-059
gb|BU970541.1|BU970541 HB14P08r BC Hordeum vulgare subsp. v... 226 1e-058
gb|BI777012.2|BI777012 EBpi03_SQ001_K10_R pistil, 4 DPA, no... 225 3e-058
gb|BG416139.2|BG416139 HVSMEk0009O18f Hordeum vulgare testa... 123 4e-058
gb|BU983425.1|BU983425 HA29L04r HA Hordeum vulgare subsp. v... 222 2e-057
gb|AJ460380.1|AJ460380 AJ460380 S00002 Hordeum vulgare subs... 221 4e-057
gb|BI779727.2|BI779727 EBem05_SQ001_F08_R embryo, 14 DPA, n... 218 2e-056
gb|AV920902.1|AV920902 AV920902 K. Sato unpublished cDNA li... 218 3e-056
gb|BQ463146.1|BQ463146 HI04D05r HI Hordeum vulgare subsp. v... 216 8e-056
gb|AL510695.1|AL510695 AL510695 Hordeum vulgare Barke devel... 209 2e-053
gb|BI777222.2|BI777222 EBro03_SQ002_H17_R root, 3 week, wat... 200 5e-051
gb|BG414864.2|BG414864 HVSMEk0004A06f Hordeum vulgare testa... 200 7e-051
gb|BJ466271.1|BJ466271 BJ466271 K. Sato unpublished cDNA li... 198 3e-050
gb|BE215251.1|BE215251 HV_CEb0006E14f Hordeum vulgare seedl... 124 6e-048
gb|BU974518.1|BU974518 HB28C21r BC Hordeum vulgare subsp. v... 188 4e-047
gb|BQ469967.1|BQ469967 HX01G04T HX Hordeum vulgare subsp. v... 176 1e-043
gb|BQ757335.1|BQ757335 EBem10_SQ003_M04_R embryo, 2 Day ger... 174 5e-043
gb|CA027160.1|CA027160 HZ58B05r HZ Hordeum vulgare subsp. v... 167 4e-041
gb|BQ764041.1|BQ764041 EBro03_SQ006_I05_R root, 3 week, wat... 166 1e-040
gb|BU999904.1|BU999904 HS16N13u HS Hordeum vulgare subsp. v... 165 2e-040
gb|BQ664914.1|BQ664914 HX01G04w HX Hordeum vulgare subsp. v... 155 2e-037
gb|BQ755962.1|BQ755962 EBem04_SQ004_F16_R embryo, 12 DPA, n... 154 6e-037
gb|CK123629.1|CK123629 BES1824104m06 BES1824 Hordeum vulgar... 150 8e-036
gb|BU967526.1|BU967526 HB04J10r BC Hordeum vulgare subsp. v... 144 7e-034
gb|BM444780.1|BM444780 EBem09_SQ006_H06_R embryo, 1 Day ger... 142 2e-033
gb|CK123577.1|CK123577 BES1824104i09 BES1824 Hordeum vulgar... 135 3e-031
gb|AJ460539.1|AJ460539 AJ460539 S00002 Hordeum vulgare subs... 130 7e-030
gb|AV914889.1|AV914889 AV914889 K. Sato unpublished cDNA li... 128 3e-029
gb|AJ460381.1|AJ460381 AJ460381 S00002 Hordeum vulgare subs... 128 3e-029
gb|AJ460494.1|AJ460494 AJ460494 S00002 Hordeum vulgare subs... 128 3e-029
gb|AJ460538.1|AJ460538 AJ460538 S00002 Hordeum vulgare subs... 106 1e-022
gb|BM441401.2|BM441401 EBma05_SQ004_C12_R maternal, 12 DPA,... 105 3e-022
gb|BM377344.1|BM377344 EBem05_SQ004_N13_R embryo, 14 DPA, n... 102 2e-021
>gb|BM377475.2|BM377475 EBem04_SQ003_D24_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_D24 5', mRNA sequence
Length = 549
Score = 290 bits (628), Expect = 5e-078
Identities = 123/130 (94%), Positives = 127/130 (97%)
Frame = +1 / +2
Query: 52 APPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLS 231
A AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLS
Sbjct: 35 AAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLS 214
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 411
LTDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAK
Sbjct: 215 LTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 394
Query: 412 IKRGGAIRQE 441
IKRGGAIRQE
Sbjct: 395 IKRGGAIRQE 424
Score = 237 bits (512), Expect = 5e-062
Identities = 108/134 (80%), Positives = 113/134 (84%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 414 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 235
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 234 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 55
Query: 71 ILAAGGAVSASNTA 30
I AA A + S TA
Sbjct: 54 IFAAAAAAARSETA 13
Score = 126 bits (270), Expect(2) = 3e-034
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 178 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 357
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 358 E*L*QVQGHVG*D*EGWCYQAR 423
Score = 110 bits (234), Expect(2) = 2e-027
Identities = 55/77 (71%), Positives = 59/77 (76%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 189 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 368
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 369 TGSRSCWLRLRGVVLSG 419
Score = 67.0 bits (140), Expect(3) = 1e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -3
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 295 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 155
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 377 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 285
Score = 39.1 bits (79), Expect(3) = 1e-026
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -3
Query: 114 HKGHSPDLHEPLERHFGCRRGGVGEQHG 31
H+GH PDL EPLERH GG E+ G
Sbjct: 97 HQGHPPDLDEPLERHLCGGCGGGEERDG 14
Score = 38.6 bits (78), Expect(2) = 3e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 49 KDAVQEVRRDRAGGPGELRQGL 114
Score = 31.8 bits (63), Expect(2) = 2e-027
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 51 RCRSRGSSRSGGWP 92
>gb|BM377699.2|BM377699 EBem04_SQ003_O16_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_O16 5', mRNA sequence
Length = 602
Score = 290 bits (628), Expect = 5e-078
Identities = 123/130 (94%), Positives = 127/130 (97%)
Frame = +1 / +1
Query: 52 APPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLS 231
A AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLS
Sbjct: 25 AAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLS 204
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 411
LTDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAK
Sbjct: 205 LTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 384
Query: 412 IKRGGAIRQE 441
IKRGGAIRQE
Sbjct: 385 IKRGGAIRQE 414
Score = 237 bits (512), Expect = 5e-062
Identities = 108/134 (80%), Positives = 113/134 (84%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 404 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 225
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 224 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 45
Query: 71 ILAAGGAVSASNTA 30
I AA A + S TA
Sbjct: 44 IFAAAAAAARSETA 3
Score = 126 bits (270), Expect(2) = 3e-034
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +3 / +3
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 168 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 347
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 348 E*L*QVQGHVG*D*EGWCYQAR 413
Score = 110 bits (234), Expect(2) = 2e-027
Identities = 55/77 (71%), Positives = 59/77 (76%)
Frame = +2 / +2
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 179 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 358
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 359 TGSRSCWLRLRGVVLSG 409
Score = 67.0 bits (140), Expect(3) = 1e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -3
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 285 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 145
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 367 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 275
Score = 39.1 bits (79), Expect(3) = 1e-026
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -3
Query: 114 HKGHSPDLHEPLERHFGCRRGGVGEQHG 31
H+GH PDL EPLERH GG E+ G
Sbjct: 87 HQGHPPDLDEPLERHLCGGCGGGEERDG 4
Score = 38.6 bits (78), Expect(2) = 3e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 39 KDAVQEVRRDRAGGPGELRQGL 104
Score = 31.8 bits (63), Expect(2) = 2e-027
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 41 RCRSRGSSRSGGWP 82
>gb|BI780787.2|BI780787 EBes01_SQ002_D08_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ002_D08 5', mRNA sequence
Length = 618
Score = 290 bits (628), Expect = 5e-078
Identities = 123/130 (94%), Positives = 127/130 (97%)
Frame = +1 / +2
Query: 52 APPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLS 231
A AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLS
Sbjct: 32 AAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLS 211
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 411
LTDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAK
Sbjct: 212 LTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 391
Query: 412 IKRGGAIRQE 441
IKRGGAIRQE
Sbjct: 392 IKRGGAIRQE 421
Score = 237 bits (512), Expect = 5e-062
Identities = 108/134 (80%), Positives = 113/134 (84%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 411 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 232
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 231 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 52
Query: 71 ILAAGGAVSASNTA 30
I AA A + S TA
Sbjct: 51 IFAAAAAAARSETA 10
Score = 126 bits (270), Expect(2) = 3e-034
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 175 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 354
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 355 E*L*QVQGHVG*D*EGWCYQAR 420
Score = 110 bits (234), Expect(2) = 2e-027
Identities = 55/77 (71%), Positives = 59/77 (76%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 186 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 365
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 366 TGSRSCWLRLRGVVLSG 416
Score = 67.0 bits (140), Expect(3) = 1e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -3
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 292 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 152
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 374 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 282
Score = 39.1 bits (79), Expect(3) = 1e-026
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -3
Query: 114 HKGHSPDLHEPLERHFGCRRGGVGEQHG 31
H+GH PDL EPLERH GG E+ G
Sbjct: 94 HQGHPPDLDEPLERHLCGGCGGGEERDG 11
Score = 38.6 bits (78), Expect(2) = 3e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 46 KDAVQEVRRDRAGGPGELRQGL 111
Score = 31.8 bits (63), Expect(2) = 2e-027
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 48 RCRSRGSSRSGGWP 89
>gb|BM101365.2|BM101365 EBpi01_SQ003_K07_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ003_K07 5', mRNA sequence
Length = 584
Score = 290 bits (628), Expect = 5e-078
Identities = 123/130 (94%), Positives = 127/130 (97%)
Frame = +1 / +1
Query: 52 APPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLS 231
A AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLS
Sbjct: 31 AAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLS 210
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 411
LTDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAK
Sbjct: 211 LTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 390
Query: 412 IKRGGAIRQE 441
IKRGGAIRQE
Sbjct: 391 IKRGGAIRQE 420
Score = 237 bits (512), Expect = 5e-062
Identities = 108/134 (80%), Positives = 113/134 (84%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 410 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 231
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 230 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 51
Query: 71 ILAAGGAVSASNTA 30
I AA A + S TA
Sbjct: 50 IFAAAAAAARSETA 9
Score = 126 bits (270), Expect(2) = 3e-034
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +3 / +3
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 174 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 353
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 354 E*L*QVQGHVG*D*EGWCYQAR 419
Score = 110 bits (234), Expect(2) = 2e-027
Identities = 55/77 (71%), Positives = 59/77 (76%)
Frame = +2 / +2
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 185 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 364
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 365 TGSRSCWLRLRGVVLSG 415
Score = 67.0 bits (140), Expect(3) = 1e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -3
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 291 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 151
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 373 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 281
Score = 39.1 bits (79), Expect(3) = 1e-026
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -3
Query: 114 HKGHSPDLHEPLERHFGCRRGGVGEQHG 31
H+GH PDL EPLERH GG E+ G
Sbjct: 93 HQGHPPDLDEPLERHLCGGCGGGEERDG 10
Score = 38.6 bits (78), Expect(2) = 3e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 45 KDAVQEVRRDRAGGPGELRQGL 110
Score = 31.8 bits (63), Expect(2) = 2e-027
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 47 RCRSRGSSRSGGWP 88
>gb|BM370305.2|BM370305 EBro08_SQ003_M14_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_M14 5', mRNA sequence
Length = 679
Score = 290 bits (628), Expect = 5e-078
Identities = 123/130 (94%), Positives = 127/130 (97%)
Frame = +1 / +1
Query: 52 APPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLS 231
A AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLS
Sbjct: 37 AAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLS 216
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 411
LTDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAK
Sbjct: 217 LTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 396
Query: 412 IKRGGAIRQE 441
IKRGGAIRQE
Sbjct: 397 IKRGGAIRQE 426
Score = 237 bits (512), Expect = 5e-062
Identities = 108/134 (80%), Positives = 113/134 (84%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 416 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 237
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 236 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 57
Query: 71 ILAAGGAVSASNTA 30
I AA A + S TA
Sbjct: 56 IFAAAAAAARSETA 15
Score = 126 bits (270), Expect(2) = 3e-034
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +3 / +3
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 180 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 359
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 360 E*L*QVQGHVG*D*EGWCYQAR 425
Score = 110 bits (234), Expect(2) = 2e-027
Identities = 55/77 (71%), Positives = 59/77 (76%)
Frame = +2 / +2
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 191 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 370
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 371 TGSRSCWLRLRGVVLSG 421
Score = 67.0 bits (140), Expect(3) = 1e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 297 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 157
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 379 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 287
Score = 39.1 bits (79), Expect(3) = 1e-026
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -2
Query: 114 HKGHSPDLHEPLERHFGCRRGGVGEQHG 31
H+GH PDL EPLERH GG E+ G
Sbjct: 99 HQGHPPDLDEPLERHLCGGCGGGEERDG 16
Score = 38.6 bits (78), Expect(2) = 3e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 51 KDAVQEVRRDRAGGPGELRQGL 116
Score = 31.8 bits (63), Expect(2) = 2e-027
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 53 RCRSRGSSRSGGWP 94
>gb|BQ758693.1|BQ758693 EBma07_SQ002_E13_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_E13 5', mRNA sequence
Length = 576
Score = 290 bits (628), Expect = 5e-078
Identities = 123/130 (94%), Positives = 127/130 (97%)
Frame = +1 / +3
Query: 52 APPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLS 231
A AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLS
Sbjct: 30 AAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLS 209
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 411
LTDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAK
Sbjct: 210 LTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 389
Query: 412 IKRGGAIRQE 441
IKRGGAIRQE
Sbjct: 390 IKRGGAIRQE 419
Score = 237 bits (512), Expect = 5e-062
Identities = 108/134 (80%), Positives = 113/134 (84%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 409 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 230
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 229 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 50
Query: 71 ILAAGGAVSASNTA 30
I AA A + S TA
Sbjct: 49 IFAAAAAAARSETA 8
Score = 126 bits (270), Expect(2) = 3e-034
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +3 / +2
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 173 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 352
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 353 E*L*QVQGHVG*D*EGWCYQAR 418
Score = 110 bits (234), Expect(2) = 2e-027
Identities = 55/77 (71%), Positives = 59/77 (76%)
Frame = +2 / +1
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 184 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 363
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 364 TGSRSCWLRLRGVVLSG 414
Score = 67.0 bits (140), Expect(3) = 1e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 290 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 150
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 372 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 280
Score = 39.1 bits (79), Expect(3) = 1e-026
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -2
Query: 114 HKGHSPDLHEPLERHFGCRRGGVGEQHG 31
H+GH PDL EPLERH GG E+ G
Sbjct: 92 HQGHPPDLDEPLERHLCGGCGGGEERDG 9
Score = 38.6 bits (78), Expect(2) = 3e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 44 KDAVQEVRRDRAGGPGELRQGL 109
Score = 31.8 bits (63), Expect(2) = 2e-027
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 46 RCRSRGSSRSGGWP 87
>gb|BQ762662.1|BQ762662 EBro02_SQ004_L15_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ004_L15 5', mRNA sequence
Length = 621
Score = 290 bits (628), Expect = 5e-078
Identities = 123/130 (94%), Positives = 127/130 (97%)
Frame = +1 / +1
Query: 52 APPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLS 231
A AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLS
Sbjct: 34 AAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLS 213
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 411
LTDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAK
Sbjct: 214 LTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 393
Query: 412 IKRGGAIRQE 441
IKRGGAIRQE
Sbjct: 394 IKRGGAIRQE 423
Score = 237 bits (512), Expect = 5e-062
Identities = 108/134 (80%), Positives = 113/134 (84%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 413 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 234
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 233 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 54
Query: 71 ILAAGGAVSASNTA 30
I AA A + S TA
Sbjct: 53 IFAAAAAAARSETA 12
Score = 126 bits (270), Expect(2) = 3e-034
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +3 / +3
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 177 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 356
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 357 E*L*QVQGHVG*D*EGWCYQAR 422
Score = 110 bits (234), Expect(2) = 2e-027
Identities = 55/77 (71%), Positives = 59/77 (76%)
Frame = +2 / +2
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 188 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 367
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 368 TGSRSCWLRLRGVVLSG 418
Score = 67.0 bits (140), Expect(3) = 1e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -1
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 294 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 154
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 376 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 284
Score = 39.1 bits (79), Expect(3) = 1e-026
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -1
Query: 114 HKGHSPDLHEPLERHFGCRRGGVGEQHG 31
H+GH PDL EPLERH GG E+ G
Sbjct: 96 HQGHPPDLDEPLERHLCGGCGGGEERDG 13
Score = 38.6 bits (78), Expect(2) = 3e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 48 KDAVQEVRRDRAGGPGELRQGL 113
Score = 31.8 bits (63), Expect(2) = 2e-027
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 50 RCRSRGSSRSGGWP 91
>gb|BQ764226.1|BQ764226 EBan01_SQ005_A12_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_A12 5', mRNA sequence
Length = 620
Score = 290 bits (628), Expect = 5e-078
Identities = 123/130 (94%), Positives = 127/130 (97%)
Frame = +1 / +3
Query: 52 APPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLS 231
A AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLS
Sbjct: 30 AAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLS 209
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 411
LTDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAK
Sbjct: 210 LTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 389
Query: 412 IKRGGAIRQE 441
IKRGGAIRQE
Sbjct: 390 IKRGGAIRQE 419
Score = 237 bits (512), Expect = 5e-062
Identities = 108/134 (80%), Positives = 113/134 (84%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 409 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 230
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 229 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 50
Query: 71 ILAAGGAVSASNTA 30
I AA A + S TA
Sbjct: 49 IFAAAAAAARSETA 8
Score = 126 bits (270), Expect(2) = 3e-034
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +3 / +2
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 173 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 352
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 353 E*L*QVQGHVG*D*EGWCYQAR 418
Score = 110 bits (234), Expect(2) = 2e-027
Identities = 55/77 (71%), Positives = 59/77 (76%)
Frame = +2 / +1
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 184 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 363
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 364 TGSRSCWLRLRGVVLSG 414
Score = 67.0 bits (140), Expect(3) = 1e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -1
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 290 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 150
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 372 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 280
Score = 39.1 bits (79), Expect(3) = 1e-026
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -1
Query: 114 HKGHSPDLHEPLERHFGCRRGGVGEQHG 31
H+GH PDL EPLERH GG E+ G
Sbjct: 92 HQGHPPDLDEPLERHLCGGCGGGEERDG 9
Score = 38.6 bits (78), Expect(2) = 3e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 44 KDAVQEVRRDRAGGPGELRQGL 109
Score = 31.8 bits (63), Expect(2) = 2e-027
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 46 RCRSRGSSRSGGWP 87
>gb|BQ766935.1|BQ766935 EBro08_SQ007_D15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_D15 5', mRNA sequence
Length = 728
Score = 290 bits (628), Expect = 5e-078
Identities = 123/130 (94%), Positives = 127/130 (97%)
Frame = +1 / +2
Query: 52 APPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLS 231
A AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLS
Sbjct: 41 AAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLS 220
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 411
LTDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAK
Sbjct: 221 LTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 400
Query: 412 IKRGGAIRQE 441
IKRGGAIRQE
Sbjct: 401 IKRGGAIRQE 430
Score = 237 bits (512), Expect = 5e-062
Identities = 108/134 (80%), Positives = 113/134 (84%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 420 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 241
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 240 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 61
Query: 71 ILAAGGAVSASNTA 30
I AA A + S TA
Sbjct: 60 IFAAAAAAARSETA 19
Score = 126 bits (270), Expect(2) = 3e-034
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 184 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 363
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 364 E*L*QVQGHVG*D*EGWCYQAR 429
Score = 110 bits (234), Expect(2) = 2e-027
Identities = 55/77 (71%), Positives = 59/77 (76%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 195 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 374
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 375 TGSRSCWLRLRGVVLSG 425
Score = 67.0 bits (140), Expect(3) = 1e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 301 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 161
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 383 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 291
Score = 39.1 bits (79), Expect(3) = 1e-026
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -2
Query: 114 HKGHSPDLHEPLERHFGCRRGGVGEQHG 31
H+GH PDL EPLERH GG E+ G
Sbjct: 103 HQGHPPDLDEPLERHLCGGCGGGEERDG 20
Score = 38.6 bits (78), Expect(2) = 3e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 55 KDAVQEVRRDRAGGPGELRQGL 120
Score = 31.8 bits (63), Expect(2) = 2e-027
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 57 RCRSRGSSRSGGWP 98
>gb|BQ768014.1|BQ768014 EBro08_SQ010_O11_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_O11 5', mRNA sequence
Length = 554
Score = 290 bits (628), Expect = 5e-078
Identities = 123/130 (94%), Positives = 127/130 (97%)
Frame = +1 / +2
Query: 52 APPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLS 231
A AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLS
Sbjct: 35 AAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLS 214
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 411
LTDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAK
Sbjct: 215 LTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 394
Query: 412 IKRGGAIRQE 441
IKRGGAIRQE
Sbjct: 395 IKRGGAIRQE 424
Score = 237 bits (512), Expect = 5e-062
Identities = 108/134 (80%), Positives = 113/134 (84%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 414 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 235
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 234 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 55
Query: 71 ILAAGGAVSASNTA 30
I AA A + S TA
Sbjct: 54 IFAAAAAAARSETA 13
Score = 126 bits (270), Expect(2) = 3e-034
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 178 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 357
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 358 E*L*QVQGHVG*D*EGWCYQAR 423
Score = 110 bits (234), Expect(2) = 2e-027
Identities = 55/77 (71%), Positives = 59/77 (76%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 189 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 368
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 369 TGSRSCWLRLRGVVLSG 419
Score = 67.0 bits (140), Expect(3) = 1e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 295 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 155
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 377 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 285
Score = 39.1 bits (79), Expect(3) = 1e-026
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -2
Query: 114 HKGHSPDLHEPLERHFGCRRGGVGEQHG 31
H+GH PDL EPLERH GG E+ G
Sbjct: 97 HQGHPPDLDEPLERHLCGGCGGGEERDG 14
Score = 38.6 bits (78), Expect(2) = 3e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 49 KDAVQEVRRDRAGGPGELRQGL 114
Score = 31.8 bits (63), Expect(2) = 2e-027
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 51 RCRSRGSSRSGGWP 92
>gb|BE421867.1|BE421867 HWM015cF.10r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM015cF.10, mRNA sequence
Length = 816
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +2
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 155 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 334
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 335 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 514
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 515 GGAIRQE 535
Score = 233 bits (504), Expect = 6e-061
Identities = 106/133 (79%), Positives = 111/133 (83%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 525 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 346
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 345 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 166
Query: 71 ILAAGGAVSASNT 33
I AA + S T
Sbjct: 165 IFAAAATAARSET 127
Score = 124 bits (266), Expect(2) = 9e-034
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 289 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 468
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+Q R
Sbjct: 469 E*L*QVQGHVG*D*EGWCYQTR 534
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 300 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 479
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 480 TGSRSCWLRLRGVVLS 527
Score = 67.0 bits (140), Expect(3) = 6e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -3
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 406 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 266
Score = 51.0 bits (105), Expect(3) = 6e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 488 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 396
Score = 38.6 bits (78), Expect(2) = 9e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 160 KDAVQEVRRDRAGGPGELRQGL 225
Score = 36.8 bits (74), Expect(3) = 6e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -2
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 224 SPCRSSPGPPARSRRTS*TA 165
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 162 RCRSRGSSRSGGWP 203
>gb|BE193624.2|BE193624 HVSMEh0082A09f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0082A09f, mRNA sequence
Length = 759
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +2
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 29 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 208
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 209 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 388
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 389 GGAIRQE 409
Score = 231 bits (498), Expect = 4e-060
Identities = 105/131 (80%), Positives = 112/131 (85%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 399 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 220
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 219 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 40
Query: 71 ILAAGGAVSAS 39
I AA + +A+
Sbjct: 39 IFAAARSETAT 7
Score = 128 bits (275), Expect(2) = 5e-035
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D*HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 163 YDQVPDELQASFTD*HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 342
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 343 E*L*QVQGHVG*D*EGWCYQAR 408
Score = 113 bits (241), Expect(2) = 3e-028
Identities = 56/77 (72%), Positives = 60/77 (77%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F *LTSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 174 AR*TSSVFH*LTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 353
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 354 TGSRSCWLRLRGVVLSG 404
Score = 68.9 bits (144), Expect(3) = 2e-026
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -1 / -3
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDVSQ K LEVHLA +H+ + + P
Sbjct: 280 FHISFLHGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECP 140
Score = 51.0 bits (105), Expect(3) = 2e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 362 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 270
Score = 38.6 bits (78), Expect(2) = 5e-035
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 34 KDAVQEVRRDRAGGPGELRQGL 99
Score = 36.8 bits (74), Expect(3) = 2e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -2
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 98 SPCRSSPGPPARSRRTS*TA 39
Score = 31.8 bits (63), Expect(2) = 3e-028
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 36 RCRSRGSSRSGGWP 77
>gb|BE196257.2|BE196257 HVSMEh0091M19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091M19f, mRNA sequence
Length = 899
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +2
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 29 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 208
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 209 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 388
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 389 GGAIRQE 409
Score = 231 bits (498), Expect = 4e-060
Identities = 105/131 (80%), Positives = 112/131 (85%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 399 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 220
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 219 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 40
Query: 71 ILAAGGAVSAS 39
I AA + +A+
Sbjct: 39 IFAAARSETAT 7
Score = 128 bits (275), Expect(2) = 5e-035
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D*HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 163 YDQVPDELQASFTD*HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 342
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 343 E*L*QVQGHVG*D*EGWCYQAR 408
Score = 113 bits (241), Expect(2) = 3e-028
Identities = 56/77 (72%), Positives = 60/77 (77%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F *LTSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 174 AR*TSSVFH*LTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 353
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 354 TGSRSCWLRLRGVVLSG 404
Score = 68.9 bits (144), Expect(3) = 2e-026
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDVSQ K LEVHLA +H+ + + P
Sbjct: 280 FHISFLHGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECP 140
Score = 51.0 bits (105), Expect(3) = 2e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 362 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 270
Score = 38.6 bits (78), Expect(2) = 5e-035
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 34 KDAVQEVRRDRAGGPGELRQGL 99
Score = 36.8 bits (74), Expect(3) = 2e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 98 SPCRSSPGPPARSRRTS*TA 39
Score = 31.8 bits (63), Expect(2) = 3e-028
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 36 RCRSRGSSRSGGWP 77
>gb|AW982424.3|AW982424 HVSMEg0003D18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003D18f, mRNA sequence
Length = 559
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +1
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 31 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 210
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 211 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 390
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 391 GGAIRQE 411
Score = 231 bits (498), Expect = 4e-060
Identities = 105/131 (80%), Positives = 112/131 (85%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 401 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 222
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 221 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 42
Query: 71 ILAAGGAVSAS 39
I AA + +A+
Sbjct: 41 IFAAARSETAT 9
Score = 128 bits (275), Expect(2) = 5e-035
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = +3 / +3
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D*HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 165 YDQVPDELQASFTD*HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 344
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 345 E*L*QVQGHVG*D*EGWCYQAR 410
Score = 113 bits (241), Expect(2) = 3e-028
Identities = 56/77 (72%), Positives = 60/77 (77%)
Frame = +2 / +2
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F *LTSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 176 AR*TSSVFH*LTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 355
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 356 TGSRSCWLRLRGVVLSG 406
Score = 68.9 bits (144), Expect(3) = 2e-026
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDVSQ K LEVHLA +H+ + + P
Sbjct: 282 FHISFLHGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECP 142
Score = 51.0 bits (105), Expect(3) = 2e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 364 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 272
Score = 38.6 bits (78), Expect(2) = 5e-035
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 36 KDAVQEVRRDRAGGPGELRQGL 101
Score = 36.8 bits (74), Expect(3) = 2e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 100 SPCRSSPGPPARSRRTS*TA 41
Score = 31.8 bits (63), Expect(2) = 3e-028
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 38 RCRSRGSSRSGGWP 79
>gb|BE195642.3|BE195642 HVSMEh0090A15f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090A15f, mRNA sequence
Length = 917
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +1
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 31 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 210
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 211 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 390
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 391 GGAIRQE 411
Score = 231 bits (498), Expect = 4e-060
Identities = 105/131 (80%), Positives = 112/131 (85%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 401 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 222
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 221 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 42
Query: 71 ILAAGGAVSAS 39
I AA + +A+
Sbjct: 41 IFAAARSETAT 9
Score = 128 bits (275), Expect(2) = 5e-035
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = +3 / +3
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D*HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 165 YDQVPDELQASFTD*HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 344
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 345 E*L*QVQGHVG*D*EGWCYQAR 410
Score = 113 bits (241), Expect(2) = 3e-028
Identities = 56/77 (72%), Positives = 60/77 (77%)
Frame = +2 / +2
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F *LTSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 176 AR*TSSVFH*LTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 355
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 356 TGSRSCWLRLRGVVLSG 406
Score = 68.9 bits (144), Expect(3) = 2e-026
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -1 / -3
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDVSQ K LEVHLA +H+ + + P
Sbjct: 282 FHISFLHGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECP 142
Score = 51.0 bits (105), Expect(3) = 2e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 364 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 272
Score = 38.6 bits (78), Expect(2) = 5e-035
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 36 KDAVQEVRRDRAGGPGELRQGL 101
Score = 36.8 bits (74), Expect(3) = 2e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -2
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 100 SPCRSSPGPPARSRRTS*TA 41
Score = 31.8 bits (63), Expect(2) = 3e-028
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 38 RCRSRGSSRSGGWP 79
>gb|AV913899.1|AV913899 AV913899 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23k24 5', mRNA sequence
Length = 576
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +3
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 42 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 221
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 222 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 401
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 402 GGAIRQE 422
Score = 231 bits (498), Expect = 4e-060
Identities = 105/131 (80%), Positives = 112/131 (85%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 412 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 233
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 232 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 53
Query: 71 ILAAGGAVSAS 39
I AA + +A+
Sbjct: 52 IFAAARSETAT 20
Score = 128 bits (275), Expect(2) = 5e-035
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = +3 / +2
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D*HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 176 YDQVPDELQASFTD*HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 355
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 356 E*L*QVQGHVG*D*EGWCYQAR 421
Score = 113 bits (241), Expect(2) = 3e-028
Identities = 56/77 (72%), Positives = 60/77 (77%)
Frame = +2 / +1
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F *LTSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 187 AR*TSSVFH*LTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 366
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 367 TGSRSCWLRLRGVVLSG 417
Score = 68.9 bits (144), Expect(3) = 2e-026
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDVSQ K LEVHLA +H+ + + P
Sbjct: 293 FHISFLHGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECP 153
Score = 51.0 bits (105), Expect(3) = 2e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 375 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 283
Score = 38.6 bits (78), Expect(2) = 5e-035
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 47 KDAVQEVRRDRAGGPGELRQGL 112
Score = 36.8 bits (74), Expect(3) = 2e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 111 SPCRSSPGPPARSRRTS*TA 52
Score = 31.8 bits (63), Expect(2) = 3e-028
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 49 RCRSRGSSRSGGWP 90
>gb|BM816732.1|BM816732 HB02C05_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB02C05_T3.ab1 similar to (AC007109) 60S ribosomal
protein L14 [Arabidopsis thaliana], mRNA sequence
Length = 817
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +3
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 33 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 212
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 213 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 392
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 393 GGAIRQE 413
Score = 231 bits (498), Expect = 4e-060
Identities = 105/131 (80%), Positives = 112/131 (85%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 403 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 224
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 223 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 44
Query: 71 ILAAGGAVSAS 39
I AA + +A+
Sbjct: 43 IFAAARSETAT 11
Score = 126 bits (270), Expect(2) = 3e-034
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +3 / +2
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 167 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 346
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 347 E*L*QVQGHVG*D*EGWCYQAR 412
Score = 110 bits (234), Expect(2) = 2e-027
Identities = 55/77 (71%), Positives = 59/77 (76%)
Frame = +2 / +1
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 178 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 357
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 358 TGSRSCWLRLRGVVLSG 408
Score = 67.0 bits (140), Expect(3) = 6e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -3
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 284 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 144
Score = 51.0 bits (105), Expect(3) = 6e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 366 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 274
Score = 38.6 bits (78), Expect(2) = 3e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 38 KDAVQEVRRDRAGGPGELRQGL 103
Score = 36.8 bits (74), Expect(3) = 6e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -2
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 102 SPCRSSPGPPARSRRTS*TA 43
Score = 31.8 bits (63), Expect(2) = 2e-027
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 40 RCRSRGSSRSGGWP 81
>gb|AJ460492.1|AJ460492 AJ460492 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200012D07F1, mRNA sequence
Length = 420
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +2
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 11 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 190
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 191 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 370
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 371 GGAIRQE 391
Score = 229 bits (495), Expect = 1e-059
Identities = 104/124 (83%), Positives = 108/124 (87%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 381 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 202
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 201 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 22
Query: 71 ILAA 60
I AA
Sbjct: 21 IFAA 10
Score = 128 bits (275), Expect(2) = 5e-035
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D*HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 145 YDQVPDELQASFTD*HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 324
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 325 E*L*QVQGHVG*D*EGWCYQAR 390
Score = 113 bits (241), Expect(2) = 3e-028
Identities = 56/77 (72%), Positives = 60/77 (77%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F *LTSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 156 AR*TSSVFH*LTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 335
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 336 TGSRSCWLRLRGVVLSG 386
Score = 68.9 bits (144), Expect(3) = 2e-026
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -1 / -3
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDVSQ K LEVHLA +H+ + + P
Sbjct: 262 FHISFLHGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECP 122
Score = 51.0 bits (105), Expect(3) = 2e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 344 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 252
Score = 38.6 bits (78), Expect(2) = 5e-035
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 16 KDAVQEVRRDRAGGPGELRQGL 81
Score = 36.8 bits (74), Expect(3) = 2e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -2
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 80 SPCRSSPGPPARSRRTS*TA 21
Score = 31.8 bits (63), Expect(2) = 3e-028
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 18 RCRSRGSSRSGGWP 59
>gb|AJ460495.1|AJ460495 AJ460495 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200079E07F1, mRNA sequence
Length = 420
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +3
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 6 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 185
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 186 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 365
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 366 GGAIRQE 386
Score = 229 bits (495), Expect = 1e-059
Identities = 104/124 (83%), Positives = 108/124 (87%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 376 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 197
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 196 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 17
Query: 71 ILAA 60
I AA
Sbjct: 16 IFAA 5
Score = 128 bits (275), Expect(2) = 5e-035
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = +3 / +2
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D*HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 140 YDQVPDELQASFTD*HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 319
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 320 E*L*QVQGHVG*D*EGWCYQAR 385
Score = 113 bits (241), Expect(2) = 3e-028
Identities = 56/77 (72%), Positives = 60/77 (77%)
Frame = +2 / +1
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F *LTSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 151 AR*TSSVFH*LTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 330
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 331 TGSRSCWLRLRGVVLSG 381
Score = 68.9 bits (144), Expect(3) = 2e-026
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDVSQ K LEVHLA +H+ + + P
Sbjct: 257 FHISFLHGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECP 117
Score = 51.0 bits (105), Expect(3) = 2e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 339 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 247
Score = 38.6 bits (78), Expect(2) = 5e-035
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 11 KDAVQEVRRDRAGGPGELRQGL 76
Score = 36.8 bits (74), Expect(3) = 2e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 75 SPCRSSPGPPARSRRTS*TA 16
Score = 31.8 bits (63), Expect(2) = 3e-028
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 13 RCRSRGSSRSGGWP 54
>gb|AJ460496.1|AJ460496 AJ460496 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200085H08F1, mRNA sequence
Length = 420
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +3
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 30 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 209
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 210 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 389
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 390 GGAIRQE 410
Score = 231 bits (498), Expect = 4e-060
Identities = 105/131 (80%), Positives = 112/131 (85%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 400 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 221
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 220 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 41
Query: 71 ILAAGGAVSAS 39
I AA + +A+
Sbjct: 40 IFAAARSETAT 8
Score = 128 bits (275), Expect(2) = 5e-035
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = +3 / +2
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D*HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 164 YDQVPDELQASFTD*HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 343
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 344 E*L*QVQGHVG*D*EGWCYQAR 409
Score = 113 bits (241), Expect(2) = 3e-028
Identities = 56/77 (72%), Positives = 60/77 (77%)
Frame = +2 / +1
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F *LTSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 175 AR*TSSVFH*LTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 354
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 355 TGSRSCWLRLRGVVLSG 405
Score = 68.9 bits (144), Expect(3) = 2e-026
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDVSQ K LEVHLA +H+ + + P
Sbjct: 281 FHISFLHGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECP 141
Score = 51.0 bits (105), Expect(3) = 2e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 363 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 271
Score = 38.6 bits (78), Expect(2) = 5e-035
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 35 KDAVQEVRRDRAGGPGELRQGL 100
Score = 36.8 bits (74), Expect(3) = 2e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 99 SPCRSSPGPPARSRRTS*TA 40
Score = 31.8 bits (63), Expect(2) = 3e-028
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 37 RCRSRGSSRSGGWP 78
>gb|BJ465123.1|BJ465123 BJ465123 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37p10 5', mRNA sequence
Length = 603
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +3
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 24 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 203
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 204 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 383
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 384 GGAIRQE 404
Score = 231 bits (498), Expect = 4e-060
Identities = 105/131 (80%), Positives = 112/131 (85%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 394 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 215
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 214 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 35
Query: 71 ILAAGGAVSAS 39
I AA + +A+
Sbjct: 34 IFAAARSETAT 2
Score = 128 bits (275), Expect(2) = 5e-035
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = +3 / +2
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D*HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 158 YDQVPDELQASFTD*HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 337
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 338 E*L*QVQGHVG*D*EGWCYQAR 403
Score = 113 bits (241), Expect(2) = 3e-028
Identities = 56/77 (72%), Positives = 60/77 (77%)
Frame = +2 / +1
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F *LTSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 169 AR*TSSVFH*LTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 348
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 349 TGSRSCWLRLRGVVLSG 399
Score = 68.9 bits (144), Expect(3) = 2e-026
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDVSQ K LEVHLA +H+ + + P
Sbjct: 275 FHISFLHGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECP 135
Score = 51.0 bits (105), Expect(3) = 2e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 357 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 265
Score = 38.6 bits (78), Expect(2) = 5e-035
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 29 KDAVQEVRRDRAGGPGELRQGL 94
Score = 36.8 bits (74), Expect(3) = 2e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 93 SPCRSSPGPPARSRRTS*TA 34
Score = 31.8 bits (63), Expect(2) = 3e-028
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 31 RCRSRGSSRSGGWP 72
>gb|BQ657976.1|BQ657976 HA06D06u HA Hordeum vulgare subsp. vulgare cDNA clone HA06D06
3-PRIME, mRNA sequence
Length = 603
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / -1
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 588 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 409
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 408 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 229
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 228 GGAIRQE 208
Score = 229 bits (495), Expect = 1e-059
Identities = 104/124 (83%), Positives = 108/124 (87%)
Frame = -2 / +2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 218 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 397
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 398 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 577
Query: 71 ILAA 60
I AA
Sbjct: 578 IFAA 589
Score = 124 bits (266), Expect(2) = 9e-034
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3 / -3
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 454 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 275
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+Q R
Sbjct: 274 E*L*QVQGHVG*D*EGWCYQTR 209
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / -2
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 443 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 264
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 263 TGSRSCWLRLRGVVLS 216
Score = 67.0 bits (140), Expect(3) = 6e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / +1
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 337 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 477
Score = 51.0 bits (105), Expect(3) = 6e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / +3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 255 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 347
Score = 38.6 bits (78), Expect(2) = 9e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / -3
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 583 KDAVQEVRRDRAGGPGELRQGL 518
Score = 36.8 bits (74), Expect(3) = 6e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / +3
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 519 SPCRSSPGPPARSRRTS*TA 578
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / -2
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 581 RCRSRGSSRSGGWP 540
>gb|BU972772.1|BU972772 HB22K20r BC Hordeum vulgare subsp. vulgare cDNA clone HB22K20
5-PRIME, mRNA sequence
Length = 590
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +2
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 56 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 235
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 236 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 415
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 416 GGAIRQE 436
Score = 235 bits (508), Expect = 2e-061
Identities = 107/134 (79%), Positives = 112/134 (83%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 426 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 247
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 246 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 67
Query: 71 ILAAGGAVSASNTA 30
I AA + S TA
Sbjct: 66 IFAAAATAARSETA 25
Score = 124 bits (266), Expect(2) = 9e-034
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 190 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 369
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+Q R
Sbjct: 370 E*L*QVQGHVG*D*EGWCYQTR 435
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 201 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 380
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 381 TGSRSCWLRLRGVVLS 428
Score = 67.0 bits (140), Expect(3) = 6e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 307 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 167
Score = 51.0 bits (105), Expect(3) = 6e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 389 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 297
Score = 38.6 bits (78), Expect(2) = 9e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 61 KDAVQEVRRDRAGGPGELRQGL 126
Score = 36.8 bits (74), Expect(3) = 6e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 125 SPCRSSPGPPARSRRTS*TA 66
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 63 RCRSRGSSRSGGWP 104
>gb|BU982565.1|BU982565 HA26O23r HA Hordeum vulgare subsp. vulgare cDNA clone HA26O23
5-PRIME, mRNA sequence
Length = 609
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +2
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 50 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 229
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 230 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 409
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 410 GGAIRQE 430
Score = 235 bits (508), Expect = 2e-061
Identities = 107/134 (79%), Positives = 112/134 (83%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 420 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 241
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 240 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 61
Query: 71 ILAAGGAVSASNTA 30
I AA + S TA
Sbjct: 60 IFAAAATAARSETA 19
Score = 124 bits (266), Expect(2) = 9e-034
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 184 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 363
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+Q R
Sbjct: 364 E*L*QVQGHVG*D*EGWCYQTR 429
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 195 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 374
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 375 TGSRSCWLRLRGVVLS 422
Score = 67.0 bits (140), Expect(3) = 6e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -3
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 301 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 161
Score = 51.0 bits (105), Expect(3) = 6e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 383 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 291
Score = 38.6 bits (78), Expect(2) = 9e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 55 KDAVQEVRRDRAGGPGELRQGL 120
Score = 36.8 bits (74), Expect(3) = 6e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -2
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 119 SPCRSSPGPPARSRRTS*TA 60
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 57 RCRSRGSSRSGGWP 98
>gb|BU983927.1|BU983927 HA31H16r HA Hordeum vulgare subsp. vulgare cDNA clone HA31H16
5-PRIME, mRNA sequence
Length = 604
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +3
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 51 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 230
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 231 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 410
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 411 GGAIRQE 431
Score = 235 bits (508), Expect = 2e-061
Identities = 107/134 (79%), Positives = 112/134 (83%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 421 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 242
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 241 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 62
Query: 71 ILAAGGAVSASNTA 30
I AA + S TA
Sbjct: 61 IFAAAATAARSETA 20
Score = 124 bits (266), Expect(2) = 9e-034
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3 / +2
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 185 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 364
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+Q R
Sbjct: 365 E*L*QVQGHVG*D*EGWCYQTR 430
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / +1
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 196 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 375
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 376 TGSRSCWLRLRGVVLS 423
Score = 67.0 bits (140), Expect(3) = 6e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -3
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 302 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 162
Score = 51.0 bits (105), Expect(3) = 6e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 384 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 292
Score = 38.6 bits (78), Expect(2) = 9e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 56 KDAVQEVRRDRAGGPGELRQGL 121
Score = 36.8 bits (74), Expect(3) = 6e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -2
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 120 SPCRSSPGPPARSRRTS*TA 61
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 58 RCRSRGSSRSGGWP 99
>gb|BU989679.1|BU989679 HF22G11r HF Hordeum vulgare subsp. vulgare cDNA clone HF22G11
5-PRIME, mRNA sequence
Length = 609
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +1
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 40 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 219
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 220 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 399
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 400 GGAIRQE 420
Score = 235 bits (508), Expect = 2e-061
Identities = 107/134 (79%), Positives = 112/134 (83%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 410 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 231
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 230 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 51
Query: 71 ILAAGGAVSASNTA 30
I AA + S TA
Sbjct: 50 IFAAAATAARSETA 9
Score = 124 bits (266), Expect(2) = 9e-034
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3 / +3
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 174 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 353
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+Q R
Sbjct: 354 E*L*QVQGHVG*D*EGWCYQTR 419
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / +2
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 185 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 364
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 365 TGSRSCWLRLRGVVLS 412
Score = 67.0 bits (140), Expect(3) = 6e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -1
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 291 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 151
Score = 51.0 bits (105), Expect(3) = 6e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 373 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 281
Score = 38.6 bits (78), Expect(2) = 9e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 45 KDAVQEVRRDRAGGPGELRQGL 110
Score = 36.8 bits (74), Expect(3) = 6e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -3
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 109 SPCRSSPGPPARSRRTS*TA 50
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 47 RCRSRGSSRSGGWP 88
>gb|BU994577.1|BU994577 HM07I06r HM Hordeum vulgare subsp. vulgare cDNA clone HM07I06
5-PRIME, mRNA sequence
Length = 614
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +1
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 49 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 228
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 229 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 408
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 409 GGAIRQE 429
Score = 235 bits (508), Expect = 2e-061
Identities = 107/134 (79%), Positives = 112/134 (83%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 419 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 240
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 239 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 60
Query: 71 ILAAGGAVSASNTA 30
I AA + S TA
Sbjct: 59 IFAAAATAARSETA 18
Score = 124 bits (266), Expect(2) = 9e-034
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3 / +3
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 183 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 362
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+Q R
Sbjct: 363 E*L*QVQGHVG*D*EGWCYQTR 428
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / +2
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 194 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 373
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 374 TGSRSCWLRLRGVVLS 421
Score = 67.0 bits (140), Expect(3) = 6e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -3
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 300 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 160
Score = 51.0 bits (105), Expect(3) = 6e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 382 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 290
Score = 38.6 bits (78), Expect(2) = 9e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 54 KDAVQEVRRDRAGGPGELRQGL 119
Score = 36.8 bits (74), Expect(3) = 6e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -2
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 118 SPCRSSPGPPARSRRTS*TA 59
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 56 RCRSRGSSRSGGWP 97
>gb|CA008553.1|CA008553 HU11F06r HU Hordeum vulgare subsp. vulgare cDNA clone HU11F06
5-PRIME, mRNA sequence
Length = 550
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +2
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 32 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 211
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 212 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 391
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 392 GGAIRQE 412
Score = 231 bits (499), Expect = 3e-060
Identities = 105/131 (80%), Positives = 110/131 (83%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 402 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 223
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 222 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 43
Query: 71 ILAAGGAVSAS 39
I AA + S
Sbjct: 42 IFAAAATAARS 10
Score = 124 bits (266), Expect(2) = 9e-034
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 166 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 345
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+Q R
Sbjct: 346 E*L*QVQGHVG*D*EGWCYQTR 411
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 177 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 356
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 357 TGSRSCWLRLRGVVLS 404
Score = 67.0 bits (140), Expect(3) = 6e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -1
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 283 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 143
Score = 51.0 bits (105), Expect(3) = 6e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 365 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 273
Score = 38.6 bits (78), Expect(2) = 9e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 37 KDAVQEVRRDRAGGPGELRQGL 102
Score = 36.8 bits (74), Expect(3) = 6e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -3
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 101 SPCRSSPGPPARSRRTS*TA 42
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 39 RCRSRGSSRSGGWP 80
>gb|CA011664.1|CA011664 HT03D07r HT Hordeum vulgare subsp. vulgare cDNA clone HT03D07
5-PRIME, mRNA sequence
Length = 586
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +1
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 52 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 231
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 232 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 411
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 412 GGAIRQE 432
Score = 235 bits (508), Expect = 2e-061
Identities = 107/134 (79%), Positives = 112/134 (83%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 422 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 243
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 242 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 63
Query: 71 ILAAGGAVSASNTA 30
I AA + S TA
Sbjct: 62 IFAAAATAARSETA 21
Score = 124 bits (266), Expect(2) = 9e-034
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3 / +3
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 186 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 365
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+Q R
Sbjct: 366 E*L*QVQGHVG*D*EGWCYQTR 431
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / +2
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 197 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 376
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 377 TGSRSCWLRLRGVVLS 424
Score = 67.0 bits (140), Expect(3) = 6e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 303 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 163
Score = 51.0 bits (105), Expect(3) = 6e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 385 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 293
Score = 38.6 bits (78), Expect(2) = 9e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 57 KDAVQEVRRDRAGGPGELRQGL 122
Score = 36.8 bits (74), Expect(3) = 6e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 121 SPCRSSPGPPARSRRTS*TA 62
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 59 RCRSRGSSRSGGWP 100
>gb|CA017707.1|CA017707 HV05P22r HV Hordeum vulgare subsp. vulgare cDNA clone HV05P22
5-PRIME, mRNA sequence
Length = 500
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +1
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 40 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 219
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 220 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 399
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 400 GGAIRQE 420
Score = 235 bits (508), Expect = 2e-061
Identities = 107/134 (79%), Positives = 112/134 (83%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 410 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 231
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 230 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 51
Query: 71 ILAAGGAVSASNTA 30
I AA + S TA
Sbjct: 50 IFAAAATAARSETA 9
Score = 124 bits (266), Expect(2) = 9e-034
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3 / +3
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 174 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 353
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+Q R
Sbjct: 354 E*L*QVQGHVG*D*EGWCYQTR 419
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / +2
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 185 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 364
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 365 TGSRSCWLRLRGVVLS 412
Score = 67.0 bits (140), Expect(3) = 6e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -3
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 291 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 151
Score = 51.0 bits (105), Expect(3) = 6e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 373 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 281
Score = 38.6 bits (78), Expect(2) = 9e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 45 KDAVQEVRRDRAGGPGELRQGL 110
Score = 36.8 bits (74), Expect(3) = 6e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -2
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 109 SPCRSSPGPPARSRRTS*TA 50
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 47 RCRSRGSSRSGGWP 88
>gb|CB883479.1|CB883479 HQ02G05w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02G05
3-PRIME, mRNA sequence
Length = 582
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +2
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 41 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 220
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 221 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 400
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 401 GGAIRQE 421
Score = 236 bits (509), Expect = 1e-061
Identities = 108/137 (78%), Positives = 113/137 (82%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 411 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 232
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 231 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 52
Query: 71 ILAAGGAVSASNTAGRR 21
I AA + S TA R
Sbjct: 51 IFAAAATAARSETATGR 1
Score = 124 bits (266), Expect(2) = 9e-034
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 175 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 354
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+Q R
Sbjct: 355 E*L*QVQGHVG*D*EGWCYQTR 420
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 186 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 365
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 366 TGSRSCWLRLRGVVLS 413
Score = 67.0 bits (140), Expect(3) = 6e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -3
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 292 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 152
Score = 51.0 bits (105), Expect(3) = 6e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 374 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 282
Score = 38.6 bits (78), Expect(2) = 9e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 46 KDAVQEVRRDRAGGPGELRQGL 111
Score = 36.8 bits (74), Expect(3) = 6e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -2
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 110 SPCRSSPGPPARSRRTS*TA 51
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 48 RCRSRGSSRSGGWP 89
>gb|CK124268.1|CK124268 BES1824108c13 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C138 5-PRIME, mRNA sequence
Length = 575
Score = 289 bits (626), Expect = 9e-078
Identities = 122/127 (96%), Positives = 126/127 (99%)
Frame = +1 / +2
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 50 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 229
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR
Sbjct: 230 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 409
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 410 GGAIRQE 430
Score = 235 bits (508), Expect = 2e-061
Identities = 107/134 (79%), Positives = 112/134 (83%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 420 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 241
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 240 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 61
Query: 71 ILAAGGAVSASNTA 30
I AA + S TA
Sbjct: 60 IFAAAATAARSETA 19
Score = 124 bits (266), Expect(2) = 9e-034
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 184 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 363
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+Q R
Sbjct: 364 E*L*QVQGHVG*D*EGWCYQTR 429
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 195 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 374
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 375 TGSRSCWLRLRGVVLS 422
Score = 67.0 bits (140), Expect(3) = 6e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 301 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 161
Score = 51.0 bits (105), Expect(3) = 6e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 383 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 291
Score = 38.6 bits (78), Expect(2) = 9e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 55 KDAVQEVRRDRAGGPGELRQGL 120
Score = 36.8 bits (74), Expect(3) = 6e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 119 SPCRSSPGPPARSRRTS*TA 60
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 57 RCRSRGSSRSGGWP 98
>gb|BM371259.2|BM371259 EBma08_SQ002_A19_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_A19 5', mRNA sequence
Length = 607
Score = 289 bits (625), Expect = 1e-077
Identities = 122/130 (93%), Positives = 127/130 (97%)
Frame = +1 / +2
Query: 52 APPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLS 231
A AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLS
Sbjct: 32 AAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLS 211
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 411
LTDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAK
Sbjct: 212 LTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 391
Query: 412 IKRGGAIRQE 441
IKRGGAI+QE
Sbjct: 392 IKRGGAIKQE 421
Score = 237 bits (512), Expect = 5e-062
Identities = 108/134 (80%), Positives = 113/134 (84%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 411 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 232
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 231 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 52
Query: 71 ILAAGGAVSASNTA 30
I AA A + S TA
Sbjct: 51 IFAAAAAAARSETA 10
Score = 126 bits (270), Expect(2) = 3e-034
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 175 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 354
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 355 E*L*QVQGHVG*D*EGWCYQAR 420
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 186 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 365
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 366 TGSRSCWLRLRGVVLS 413
Score = 67.0 bits (140), Expect(3) = 1e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -1
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 292 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 152
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 374 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 282
Score = 39.1 bits (79), Expect(3) = 1e-026
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -1
Query: 114 HKGHSPDLHEPLERHFGCRRGGVGEQHG 31
H+GH PDL EPLERH GG E+ G
Sbjct: 94 HQGHPPDLDEPLERHLCGGCGGGEERDG 11
Score = 38.6 bits (78), Expect(2) = 3e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 46 KDAVQEVRRDRAGGPGELRQGL 111
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 48 RCRSRGSSRSGGWP 89
>gb|BG344422.1|BG344422 HVSMEg0009D14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0009D14f, mRNA sequence
Length = 811
Score = 287 bits (622), Expect = 3e-077
Identities = 120/129 (93%), Positives = 126/129 (97%)
Frame = +1 / +3
Query: 55 PPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSL 234
P + KMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRAL+DAPDM+RCQMNFKRLSL
Sbjct: 18 PRSRKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQMNFKRLSL 197
Query: 235 TDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 414
TDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI
Sbjct: 198 TDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 377
Query: 415 KRGGAIRQE 441
KRGGAIRQE
Sbjct: 378 KRGGAIRQE 404
Score = 243 bits (524), Expect = 1e-063
Identities = 110/126 (87%), Positives = 113/126 (89%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI A+MTLNLSKSLSDALLF TISFLPHELFSHL+FTSASSIALI V F G RLM
Sbjct: 394 IAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVAFLGIRLM 215
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSVRESRLKFIWQR MSGAS ALFWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 214 SILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 35
Query: 71 ILAAGG 54
IL G
Sbjct: 34 ILRLRG 17
Score = 139 bits (298), Expect = 2e-032
Identities = 70/123 (56%), Positives = 74/123 (60%)
Frame = +2 / +1
Query: 68 KCRSRGSWRSGEWPLXXXXXXXXXXXXXXXXXXXXGLLWMPPTWFVAK*TSSGFP*LTSR 247
KCRSRG WRSG WP G L M T A+*TSSG P* TSR
Sbjct: 31 KCRSRGLWRSGGWPW*TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSR 210
Query: 248 LTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTLTGSRSCWRRSRGVV 427
LT + S RR *S+ WRKLM*+ SGR HGARS*L RRG H SMTLTGSRSC RSRG
Sbjct: 211 LTSSGSLRRQL*SKLWRKLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEE 390
Query: 428 PSG 436
SG
Sbjct: 391 LSG 399
Score = 127 bits (273), Expect(2) = 6e-036
Identities = 59/90 (65%), Positives = 64/90 (71%)
Frame = +3 / +2
Query: 168 EQGSCGCPRHGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
EQG+ C H LP+ELQAA PD HQD*H P E +DQ GGS*CE QVGE MGQEA
Sbjct: 131 EQGTY*CTGHDPLPDELQAALPDRHQD*HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEA 310
Query: 348 DCSEEESITQ*L*QVQGHVGEDQEGWCHQA 437
DC EEE I Q*L*QVQGH +DQEG +QA
Sbjct: 311 DCPEEEGIAQ*L*QVQGHACQDQEGRSYQA 400
Score = 77.1 bits (162), Expect(2) = 6e-022
Identities = 38/66 (57%), Positives = 43/66 (65%)
Frame = -3 / -2
Query: 265 GHV*CQS*CQSGKAA*SSFGNEPCRGHPQEPCSXXXXXXXXXXGHTPCRSSQGPLARSPR 86
G *CQS*C+SG+AA*SS G+ C H PCS G +PCRSS GP ARSP+
Sbjct: 228 GSA*CQS*CRSGRAA*SSSGSGSCPVHQ*VPCSGRQRRR*RRGGRSPCRSSPGPPARSPQ 49
Query: 85 TS*TAF 68
TS*TAF
Sbjct: 48 TS*TAF 31
Score = 71.2 bits (149), Expect(3) = 1e-029
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = -1 / -3
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HISFLH DQ LL D +VNLDV QG+PLEVHLA +HV I+K P
Sbjct: 272 HISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCP 135
Score = 53.8 bits (111), Expect(3) = 1e-029
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH* M SSS QSASCPM+ SPT SHQ
Sbjct: 357 *TCQSH*AMPSSSGQSASCPMNCSPTWSSHQ 265
Score = 46.4 bits (95), Expect(2) = 6e-022
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = -1 / -3
Query: 489 HQSNXXXXXXXXXXXXXLPDGTTPLDLRQHDLEPVKVIE*C 367
HQS+ LPD ++PLDL +HDLEPVKVIE C
Sbjct: 452 HQSDXSSGNLLLKLR*LLPDSSSPLDLGKHDLEPVKVIERC 330
Score = 42.8 bits (87), Expect(3) = 1e-029
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1 / -3
Query: 114 HKGHSPDLHEPLERHFGCRR 55
H+GH PDLH+PLERHF R
Sbjct: 77 HQGHPPDLHKPLERHFAAAR 18
Score = 42.8 bits (87), Expect(2) = 6e-036
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
QNAVQEV GDRA GP ELRQG+
Sbjct: 29 QNAVQEVCGDRAGGPGELRQGL 94
>gb|AJ460382.1|AJ460382 AJ460382 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200032B11F1, mRNA sequence
Length = 480
Score = 287 bits (622), Expect = 3e-077
Identities = 120/129 (93%), Positives = 126/129 (97%)
Frame = +1 / +3
Query: 55 PPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSL 234
P + KMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRAL+DAPDM+RCQMNFKRLSL
Sbjct: 9 PRSRKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQMNFKRLSL 188
Query: 235 TDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 414
TDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI
Sbjct: 189 TDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 368
Query: 415 KRGGAIRQE 441
KRGGAIRQE
Sbjct: 369 KRGGAIRQE 395
Score = 243 bits (524), Expect = 1e-063
Identities = 110/126 (87%), Positives = 113/126 (89%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI A+MTLNLSKSLSDALLF TISFLPHELFSHL+FTSASSIALI V F G RLM
Sbjct: 385 IAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVAFLGIRLM 206
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSVRESRLKFIWQR MSGAS ALFWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 205 SILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 26
Query: 71 ILAAGG 54
IL G
Sbjct: 25 ILRLRG 8
Score = 139 bits (298), Expect = 2e-032
Identities = 70/123 (56%), Positives = 74/123 (60%)
Frame = +2 / +1
Query: 68 KCRSRGSWRSGEWPLXXXXXXXXXXXXXXXXXXXXGLLWMPPTWFVAK*TSSGFP*LTSR 247
KCRSRG WRSG WP G L M T A+*TSSG P* TSR
Sbjct: 22 KCRSRGLWRSGGWPW*TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSR 201
Query: 248 LTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTLTGSRSCWRRSRGVV 427
LT + S RR *S+ WRKLM*+ SGR HGARS*L RRG H SMTLTGSRSC RSRG
Sbjct: 202 LTSSGSLRRQL*SKLWRKLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEE 381
Query: 428 PSG 436
SG
Sbjct: 382 LSG 390
Score = 132 bits (283), Expect(2) = 3e-037
Identities = 64/108 (59%), Positives = 69/108 (63%)
Frame = +3 / +2
Query: 168 EQGSCGCPRHGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
EQG+ C H LP+ELQAA PD HQD*H P E +DQ GGS*CE QVGE MGQEA
Sbjct: 122 EQGTY*CTGHDPLPDELQAALPDRHQD*HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEA 301
Query: 348 DCSEEESITQ*L*QVQGHVGEDQEGWCHQARXXXXXXXXXXXLDCFGG 491
DC EEE I Q*L*QVQGH +DQEG +QA LD FGG
Sbjct: 302 DCPEEEGIAQ*L*QVQGHACQDQEGRSYQAGASEA*EGGCRCLDHFGG 445
Score = 77.1 bits (162), Expect(2) = 6e-022
Identities = 38/66 (57%), Positives = 43/66 (65%)
Frame = -3 / -1
Query: 265 GHV*CQS*CQSGKAA*SSFGNEPCRGHPQEPCSXXXXXXXXXXGHTPCRSSQGPLARSPR 86
G *CQS*C+SG+AA*SS G+ C H PCS G +PCRSS GP ARSP+
Sbjct: 219 GSA*CQS*CRSGRAA*SSSGSGSCPVHQ*VPCSGRQRRR*RRGGRSPCRSSPGPPARSPQ 40
Query: 85 TS*TAF 68
TS*TAF
Sbjct: 39 TS*TAF 22
Score = 71.2 bits (149), Expect(3) = 1e-029
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = -1 / -2
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HISFLH DQ LL D +VNLDV QG+PLEVHLA +HV I+K P
Sbjct: 263 HISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCP 126
Score = 53.8 bits (111), Expect(3) = 1e-029
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH* M SSS QSASCPM+ SPT SHQ
Sbjct: 348 *TCQSH*AMPSSSGQSASCPMNCSPTWSSHQ 256
Score = 46.4 bits (95), Expect(2) = 6e-022
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = -1 / -2
Query: 489 HQSNXXXXXXXXXXXXXLPDGTTPLDLRQHDLEPVKVIE*C 367
HQS+ LPD ++PLDL +HDLEPVKVIE C
Sbjct: 443 HQSDLSSGNLLLKLR*LLPDSSSPLDLGKHDLEPVKVIERC 321
Score = 42.8 bits (87), Expect(3) = 1e-029
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1 / -2
Query: 114 HKGHSPDLHEPLERHFGCRR 55
H+GH PDLH+PLERHF R
Sbjct: 68 HQGHPPDLHKPLERHFAAAR 9
Score = 42.8 bits (87), Expect(2) = 3e-037
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
QNAVQEV GDRA GP ELRQG+
Sbjct: 20 QNAVQEVCGDRAGGPGELRQGL 85
>gb|BJ463077.1|BJ463077 BJ463077 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25k09 5', mRNA sequence
Length = 519
Score = 287 bits (622), Expect = 3e-077
Identities = 121/127 (95%), Positives = 125/127 (98%)
Frame = +1 / +3
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 30 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 209
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVML KIKR
Sbjct: 210 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLVKIKR 389
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 390 GGAIRQE 410
Score = 229 bits (494), Expect = 1e-059
Identities = 104/131 (79%), Positives = 111/131 (84%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI NMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 400 IAPPLLILTNMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 221
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 220 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 41
Query: 71 ILAAGGAVSAS 39
I AA + +A+
Sbjct: 40 IFAAARSETAT 8
Score = 128 bits (275), Expect(2) = 5e-035
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = +3 / +2
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D*HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 164 YDQVPDELQASFTD*HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 343
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 344 E*L*QVQGHVG*D*EGWCYQAR 409
Score = 113 bits (241), Expect(2) = 3e-028
Identities = 56/77 (72%), Positives = 60/77 (77%)
Frame = +2 / +1
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F *LTSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 175 AR*TSSVFH*LTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 354
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 355 TGSRSCWLRLRGVVLSG 405
Score = 68.9 bits (144), Expect(3) = 2e-026
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDVSQ K LEVHLA +H+ + + P
Sbjct: 281 FHISFLHGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECP 141
Score = 51.0 bits (105), Expect(3) = 2e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 363 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 271
Score = 38.6 bits (78), Expect(2) = 5e-035
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 35 KDAVQEVRRDRAGGPGELRQGL 100
Score = 36.8 bits (74), Expect(3) = 2e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 99 SPCRSSPGPPARSRRTS*TA 40
Score = 31.8 bits (63), Expect(2) = 3e-028
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 37 RCRSRGSSRSGGWP 78
>gb|BJ463126.1|BJ463126 BJ463126 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25o09 5', mRNA sequence
Length = 567
Score = 287 bits (622), Expect = 3e-077
Identities = 121/127 (95%), Positives = 125/127 (98%)
Frame = +1 / +3
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 30 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 209
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVML KIKR
Sbjct: 210 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLVKIKR 389
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 390 GGAIRQE 410
Score = 229 bits (494), Expect = 1e-059
Identities = 104/131 (79%), Positives = 111/131 (84%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI NMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 400 IAPPLLILTNMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 221
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 220 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 41
Query: 71 ILAAGGAVSAS 39
I AA + +A+
Sbjct: 40 IFAAARSETAT 8
Score = 128 bits (275), Expect(2) = 5e-035
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = +3 / +2
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D*HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 164 YDQVPDELQASFTD*HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 343
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 344 E*L*QVQGHVG*D*EGWCYQAR 409
Score = 113 bits (241), Expect(2) = 3e-028
Identities = 56/77 (72%), Positives = 60/77 (77%)
Frame = +2 / +1
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F *LTSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 175 AR*TSSVFH*LTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 354
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 355 TGSRSCWLRLRGVVLSG 405
Score = 68.9 bits (144), Expect(3) = 2e-026
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDVSQ K LEVHLA +H+ + + P
Sbjct: 281 FHISFLHGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECP 141
Score = 51.0 bits (105), Expect(3) = 2e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 363 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 271
Score = 38.6 bits (78), Expect(2) = 5e-035
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 35 KDAVQEVRRDRAGGPGELRQGL 100
Score = 36.8 bits (74), Expect(3) = 2e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 99 SPCRSSPGPPARSRRTS*TA 40
Score = 31.8 bits (63), Expect(2) = 3e-028
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +1
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 37 RCRSRGSSRSGGWP 78
>gb|BJ467579.1|BJ467579 BJ467579 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25o09 3', mRNA sequence
Length = 523
Score = 287 bits (622), Expect = 3e-077
Identities = 121/127 (95%), Positives = 125/127 (98%)
Frame = +1 / -3
Query: 61 AAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSLTD 240
AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLSLTD
Sbjct: 494 AAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLTD 315
Query: 241 IKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKR 420
IKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVML KIKR
Sbjct: 314 IKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLVKIKR 135
Query: 421 GGAIRQE 441
GGAIRQE
Sbjct: 134 GGAIRQE 114
Score = 229 bits (494), Expect = 1e-059
Identities = 104/131 (79%), Positives = 111/131 (84%)
Frame = -2 / +1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI NMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 124 IAPPLLILTNMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 303
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 304 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 483
Query: 71 ILAAGGAVSAS 39
I AA + +A+
Sbjct: 484 IFAAARSETAT 516
Score = 128 bits (275), Expect(2) = 5e-035
Identities = 55/82 (67%), Positives = 67/82 (81%)
Frame = +3 / -2
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D*HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 360 YDQVPDELQASFTD*HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 181
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 180 E*L*QVQGHVG*D*EGWCYQAR 115
Score = 113 bits (241), Expect(2) = 3e-028
Identities = 56/77 (72%), Positives = 60/77 (77%)
Frame = +2 / -1
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F *LTSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 349 AR*TSSVFH*LTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 170
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R RGVV SG
Sbjct: 169 TGSRSCWLRLRGVVLSG 119
Score = 68.9 bits (144), Expect(3) = 2e-026
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -1 / +3
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDVSQ K LEVHLA +H+ + + P
Sbjct: 243 FHISFLHGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECP 383
Score = 51.0 bits (105), Expect(3) = 2e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / +2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 161 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 253
Score = 38.6 bits (78), Expect(2) = 5e-035
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / -2
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 489 KDAVQEVRRDRAGGPGELRQGL 424
Score = 36.8 bits (74), Expect(3) = 2e-026
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / +2
Query: 130 TPCRSSQGPLARSPRTS*TA 71
+PCRSS GP ARS RTS*TA
Sbjct: 425 SPCRSSPGPPARSRRTS*TA 484
Score = 31.8 bits (63), Expect(2) = 3e-028
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 487 RCRSRGSSRSGGWP 446
>gb|BQ756834.1|BQ756834 EBem09_SQ003_O10_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ003_O10 5', mRNA sequence
Length = 523
Score = 287 bits (622), Expect = 3e-077
Identities = 122/130 (93%), Positives = 126/130 (96%)
Frame = +1 / +2
Query: 52 APPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLS 231
A AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLS
Sbjct: 41 AAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLS 220
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 411
LTDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAK
Sbjct: 221 LTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 400
Query: 412 IKRGGAIRQE 441
IKRGGAI QE
Sbjct: 401 IKRGGAIXQE 430
Score = 237 bits (512), Expect = 5e-062
Identities = 108/134 (80%), Positives = 113/134 (84%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 420 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 241
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 240 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 61
Query: 71 ILAAGGAVSASNTA 30
I AA A + S TA
Sbjct: 60 IFAAAAAAARSETA 19
Score = 123 bits (264), Expect(2) = 2e-033
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 184 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 363
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+ AR
Sbjct: 364 E*L*QVQGHVG*D*EGWCYXAR 429
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 195 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 374
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 375 TGSRSCWLRLRGVVLS 422
Score = 67.0 bits (140), Expect(3) = 1e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -1
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 301 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 161
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 383 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 291
Score = 39.1 bits (79), Expect(3) = 1e-026
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -1
Query: 114 HKGHSPDLHEPLERHFGCRRGGVGEQHG 31
H+GH PDL EPLERH GG E+ G
Sbjct: 103 HQGHPPDLDEPLERHLCGGCGGGEERDG 20
Score = 38.6 bits (78), Expect(2) = 2e-033
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 55 KDAVQEVRRDRAGGPGELRQGL 120
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 57 RCRSRGSSRSGGWP 98
>gb|BQ761233.1|BQ761233 EBro04_SQ004_M16_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ004_M16 5', mRNA sequence
Length = 538
Score = 287 bits (622), Expect = 3e-077
Identities = 122/130 (93%), Positives = 126/130 (96%)
Frame = +1 / +2
Query: 52 APPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLS 231
A AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLS
Sbjct: 41 AAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLS 220
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 411
LTDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAK
Sbjct: 221 LTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 400
Query: 412 IKRGGAIRQE 441
IKRGGAI QE
Sbjct: 401 IKRGGAIMQE 430
Score = 237 bits (512), Expect = 5e-062
Identities = 108/134 (80%), Positives = 113/134 (84%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 420 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 241
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 240 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 61
Query: 71 ILAAGGAVSASNTA 30
I AA A + S TA
Sbjct: 60 IFAAAAAAARSETA 19
Score = 124 bits (265), Expect(2) = 1e-033
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 184 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 363
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+ AR
Sbjct: 364 E*L*QVQGHVG*D*EGWCYHAR 429
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 195 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 374
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 375 TGSRSCWLRLRGVVLS 422
Score = 67.0 bits (140), Expect(3) = 1e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -1
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 301 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 161
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 383 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 291
Score = 39.1 bits (79), Expect(3) = 1e-026
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -1
Query: 114 HKGHSPDLHEPLERHFGCRRGGVGEQHG 31
H+GH PDL EPLERH GG E+ G
Sbjct: 103 HQGHPPDLDEPLERHLCGGCGGGEERDG 20
Score = 38.6 bits (78), Expect(2) = 1e-033
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 55 KDAVQEVRRDRAGGPGELRQGL 120
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 57 RCRSRGSSRSGGWP 98
>gb|BM377218.2|BM377218 EBem05_SQ004_H13_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ004_H13 5', mRNA sequence
Length = 628
Score = 286 bits (620), Expect = 6e-077
Identities = 121/130 (93%), Positives = 126/130 (96%)
Frame = +1 / +2
Query: 52 APPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLS 231
A AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVD NRALVDAPDM+RCQMNFKRLS
Sbjct: 41 AAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDHNRALVDAPDMIRCQMNFKRLS 220
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 411
LTDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAK
Sbjct: 221 LTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 400
Query: 412 IKRGGAIRQE 441
IKRGGAI+QE
Sbjct: 401 IKRGGAIKQE 430
Score = 234 bits (506), Expect = 3e-061
Identities = 107/134 (79%), Positives = 112/134 (83%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 420 IAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 241
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A WSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 240 SILMSVSERRLKFIWHLIISGASTSARLWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 61
Query: 71 ILAAGGAVSASNTA 30
I AA A + S TA
Sbjct: 60 IFAAAAAAARSETA 19
Score = 126 bits (270), Expect(2) = 3e-034
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 184 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 363
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D EGWC+QAR
Sbjct: 364 E*L*QVQGHVG*D*EGWCYQAR 429
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 195 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 374
Query: 386 TGSRSCWRRSRGVVPS 433
TGSRSCW R RGVV S
Sbjct: 375 TGSRSCWLRLRGVVLS 422
Score = 67.0 bits (140), Expect(3) = 1e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -1
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 301 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 161
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 383 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 291
Score = 39.1 bits (79), Expect(3) = 1e-026
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -1
Query: 114 HKGHSPDLHEPLERHFGCRRGGVGEQHG 31
H+GH PDL EPLERH GG E+ G
Sbjct: 103 HQGHPPDLDEPLERHLCGGCGGGEERDG 20
Score = 38.6 bits (78), Expect(2) = 3e-034
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 55 KDAVQEVRRDRAGGPGELRQGL 120
Score = 31.8 bits (63), Expect(2) = 2e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 57 RCRSRGSSRSGGWP 98
>gb|BQ460332.1|BQ460332 HA06I23r HA Hordeum vulgare subsp. vulgare cDNA clone HA06I23
5-PRIME, mRNA sequence
Length = 615
Score = 286 bits (618), Expect = 1e-076
Identities = 119/129 (92%), Positives = 126/129 (97%)
Frame = +1 / +1
Query: 55 PPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSL 234
P + +MPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRAL+DAPDM+RCQMNFKRLSL
Sbjct: 31 PRSREMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQMNFKRLSL 210
Query: 235 TDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 414
TDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI
Sbjct: 211 TDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 390
Query: 415 KRGGAIRQE 441
KRGGAIRQE
Sbjct: 391 KRGGAIRQE 417
Score = 240 bits (518), Expect = 7e-063
Identities = 108/121 (89%), Positives = 111/121 (91%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI A+MTLNLSKSLSDALLF TISFLPHELFSHL+FTSASSIALI V F G RLM
Sbjct: 407 IAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVAFLGIRLM 228
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSVRESRLKFIWQR MSGAS ALFWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 227 SILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 48
Query: 71 I 69
I
Sbjct: 47 I 45
Score = 139 bits (298), Expect = 2e-032
Identities = 70/123 (56%), Positives = 74/123 (60%)
Frame = +2 / +2
Query: 68 KCRSRGSWRSGEWPLXXXXXXXXXXXXXXXXXXXXGLLWMPPTWFVAK*TSSGFP*LTSR 247
KCRSRG WRSG WP G L M T A+*TSSG P* TSR
Sbjct: 44 KCRSRGLWRSGGWPW*TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSR 223
Query: 248 LTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTLTGSRSCWRRSRGVV 427
LT + S RR *S+ WRKLM*+ SGR HGARS*L RRG H SMTLTGSRSC RSRG
Sbjct: 224 LTSSGSLRRQL*SKLWRKLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEE 403
Query: 428 PSG 436
SG
Sbjct: 404 LSG 412
Score = 129 bits (276), Expect(2) = 8e-036
Identities = 63/108 (58%), Positives = 68/108 (62%)
Frame = +3 / +3
Query: 168 EQGSCGCPRHGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
EQG+ C H LP+ELQAA PD HQD*H P E +DQ GGS*CE QVGE MGQEA
Sbjct: 144 EQGTY*CTGHDPLPDELQAALPDRHQD*HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEA 323
Query: 348 DCSEEESITQ*L*QVQGHVGEDQEGWCHQARXXXXXXXXXXXLDCFGG 491
DC EEE I Q*L*QVQGH +DQEG +QA L FGG
Sbjct: 324 DCPEEEGIAQ*L*QVQGHACQDQEGRSYQAGASEA*EGGCRCLXHFGG 467
Score = 77.1 bits (162), Expect(2) = 6e-022
Identities = 38/66 (57%), Positives = 43/66 (65%)
Frame = -3 / -3
Query: 265 GHV*CQS*CQSGKAA*SSFGNEPCRGHPQEPCSXXXXXXXXXXGHTPCRSSQGPLARSPR 86
G *CQS*C+SG+AA*SS G+ C H PCS G +PCRSS GP ARSP+
Sbjct: 241 GSA*CQS*CRSGRAA*SSSGSGSCPVHQ*VPCSGRQRRR*RRGGRSPCRSSPGPPARSPQ 62
Query: 85 TS*TAF 68
TS*TAF
Sbjct: 61 TS*TAF 44
Score = 71.2 bits (149), Expect(3) = 1e-029
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = -1 / -1
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HISFLH DQ LL D +VNLDV QG+PLEVHLA +HV I+K P
Sbjct: 285 HISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCP 148
Score = 53.8 bits (111), Expect(3) = 1e-029
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH* M SSS QSASCPM+ SPT SHQ
Sbjct: 370 *TCQSH*AMPSSSGQSASCPMNCSPTWSSHQ 278
Score = 46.4 bits (95), Expect(2) = 6e-022
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = -1 / -1
Query: 489 HQSNXXXXXXXXXXXXXLPDGTTPLDLRQHDLEPVKVIE*C 367
HQS+ LPD ++PLDL +HDLEPVKVIE C
Sbjct: 465 HQSDXSSGNLLLKLR*LLPDSSSPLDLGKHDLEPVKVIERC 343
Score = 42.8 bits (87), Expect(3) = 1e-029
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1 / -1
Query: 114 HKGHSPDLHEPLERHFGCRR 55
H+GH PDLH+PLERHF R
Sbjct: 90 HQGHPPDLHKPLERHFAAAR 31
Score = 40.9 bits (83), Expect(2) = 8e-036
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
+NAVQEV GDRA GP ELRQG+
Sbjct: 42 RNAVQEVCGDRAGGPGELRQGL 107
>gb|BQ657133.1|BQ657133 HA09I10u HA Hordeum vulgare subsp. vulgare cDNA clone HA09I10
3-PRIME, mRNA sequence
Length = 605
Score = 286 bits (618), Expect = 1e-076
Identities = 119/129 (92%), Positives = 126/129 (97%)
Frame = +1 / +2
Query: 55 PPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSL 234
P + +MPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRAL+DAPDM+RCQMNFKRLSL
Sbjct: 62 PRSREMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQMNFKRLSL 241
Query: 235 TDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 414
TDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI
Sbjct: 242 TDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 421
Query: 415 KRGGAIRQE 441
KRGGAIRQE
Sbjct: 422 KRGGAIRQE 448
Score = 240 bits (518), Expect = 7e-063
Identities = 108/121 (89%), Positives = 111/121 (91%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI A+MTLNLSKSLSDALLF TISFLPHELFSHL+FTSASSIALI V F G RLM
Sbjct: 438 IAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVAFLGIRLM 259
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSVRESRLKFIWQR MSGAS ALFWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 258 SILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 79
Query: 71 I 69
I
Sbjct: 78 I 76
Score = 139 bits (298), Expect = 2e-032
Identities = 70/123 (56%), Positives = 74/123 (60%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWPLXXXXXXXXXXXXXXXXXXXXGLLWMPPTWFVAK*TSSGFP*LTSR 247
KCRSRG WRSG WP G L M T A+*TSSG P* TSR
Sbjct: 75 KCRSRGLWRSGGWPW*TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSR 254
Query: 248 LTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTLTGSRSCWRRSRGVV 427
LT + S RR *S+ WRKLM*+ SGR HGARS*L RRG H SMTLTGSRSC RSRG
Sbjct: 255 LTSSGSLRRQL*SKLWRKLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEE 434
Query: 428 PSG 436
SG
Sbjct: 435 LSG 443
Score = 132 bits (283), Expect(2) = 9e-037
Identities = 64/108 (59%), Positives = 69/108 (63%)
Frame = +3 / +1
Query: 168 EQGSCGCPRHGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
EQG+ C H LP+ELQAA PD HQD*H P E +DQ GGS*CE QVGE MGQEA
Sbjct: 175 EQGTY*CTGHDPLPDELQAALPDRHQD*HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEA 354
Query: 348 DCSEEESITQ*L*QVQGHVGEDQEGWCHQARXXXXXXXXXXXLDCFGG 491
DC EEE I Q*L*QVQGH +DQEG +QA LD FGG
Sbjct: 355 DCPEEEGIAQ*L*QVQGHACQDQEGRSYQAGASEA*EGGCRCLDHFGG 498
Score = 77.1 bits (162), Expect(2) = 6e-022
Identities = 38/66 (57%), Positives = 43/66 (65%)
Frame = -3 / -1
Query: 265 GHV*CQS*CQSGKAA*SSFGNEPCRGHPQEPCSXXXXXXXXXXGHTPCRSSQGPLARSPR 86
G *CQS*C+SG+AA*SS G+ C H PCS G +PCRSS GP ARSP+
Sbjct: 272 GSA*CQS*CRSGRAA*SSSGSGSCPVHQ*VPCSGRQRRR*RRGGRSPCRSSPGPPARSPQ 93
Query: 85 TS*TAF 68
TS*TAF
Sbjct: 92 TS*TAF 75
Score = 71.2 bits (149), Expect(3) = 1e-029
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = -1 / -2
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HISFLH DQ LL D +VNLDV QG+PLEVHLA +HV I+K P
Sbjct: 316 HISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCP 179
Score = 53.8 bits (111), Expect(3) = 1e-029
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH* M SSS QSASCPM+ SPT SHQ
Sbjct: 401 *TCQSH*AMPSSSGQSASCPMNCSPTWSSHQ 309
Score = 46.4 bits (95), Expect(2) = 6e-022
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = -1 / -2
Query: 489 HQSNXXXXXXXXXXXXXLPDGTTPLDLRQHDLEPVKVIE*C 367
HQS+ LPD ++PLDL +HDLEPVKVIE C
Sbjct: 496 HQSDLSSGNLLLKLR*LLPDSSSPLDLGKHDLEPVKVIERC 374
Score = 42.8 bits (87), Expect(3) = 1e-029
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1 / -2
Query: 114 HKGHSPDLHEPLERHFGCRR 55
H+GH PDLH+PLERHF R
Sbjct: 121 HQGHPPDLHKPLERHFAAAR 62
Score = 40.9 bits (83), Expect(2) = 9e-037
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
+NAVQEV GDRA GP ELRQG+
Sbjct: 73 RNAVQEVCGDRAGGPGELRQGL 138
>gb|BQ657240.1|BQ657240 HA09C02u HA Hordeum vulgare subsp. vulgare cDNA clone HA09C02
3-PRIME, mRNA sequence
Length = 460
Score = 286 bits (618), Expect = 1e-076
Identities = 119/129 (92%), Positives = 126/129 (97%)
Frame = +1 / +2
Query: 55 PPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSL 234
P + +MPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRAL+DAPDM+RCQMNFKRLSL
Sbjct: 62 PRSREMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQMNFKRLSL 241
Query: 235 TDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 414
TDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI
Sbjct: 242 TDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 421
Query: 415 KRGGAIRQE 441
KRGGAIRQE
Sbjct: 422 KRGGAIRQE 448
Score = 240 bits (518), Expect = 7e-063
Identities = 108/121 (89%), Positives = 111/121 (91%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI A+MTLNLSKSLSDALLF TISFLPHELFSHL+FTSASSIALI V F G RLM
Sbjct: 438 IAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVAFLGIRLM 259
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSVRESRLKFIWQR MSGAS ALFWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 258 SILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 79
Query: 71 I 69
I
Sbjct: 78 I 76
Score = 139 bits (298), Expect = 2e-032
Identities = 70/123 (56%), Positives = 74/123 (60%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWPLXXXXXXXXXXXXXXXXXXXXGLLWMPPTWFVAK*TSSGFP*LTSR 247
KCRSRG WRSG WP G L M T A+*TSSG P* TSR
Sbjct: 75 KCRSRGLWRSGGWPW*TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSR 254
Query: 248 LTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTLTGSRSCWRRSRGVV 427
LT + S RR *S+ WRKLM*+ SGR HGARS*L RRG H SMTLTGSRSC RSRG
Sbjct: 255 LTSSGSLRRQL*SKLWRKLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEE 434
Query: 428 PSG 436
SG
Sbjct: 435 LSG 443
Score = 127 bits (273), Expect(2) = 2e-035
Identities = 59/90 (65%), Positives = 64/90 (71%)
Frame = +3 / +1
Query: 168 EQGSCGCPRHGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
EQG+ C H LP+ELQAA PD HQD*H P E +DQ GGS*CE QVGE MGQEA
Sbjct: 175 EQGTY*CTGHDPLPDELQAALPDRHQD*HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEA 354
Query: 348 DCSEEESITQ*L*QVQGHVGEDQEGWCHQA 437
DC EEE I Q*L*QVQGH +DQEG +QA
Sbjct: 355 DCPEEEGIAQ*L*QVQGHACQDQEGRSYQA 444
Score = 77.1 bits (162), Expect(2) = 2e-021
Identities = 38/66 (57%), Positives = 43/66 (65%)
Frame = -3 / -3
Query: 265 GHV*CQS*CQSGKAA*SSFGNEPCRGHPQEPCSXXXXXXXXXXGHTPCRSSQGPLARSPR 86
G *CQS*C+SG+AA*SS G+ C H PCS G +PCRSS GP ARSP+
Sbjct: 272 GSA*CQS*CRSGRAA*SSSGSGSCPVHQ*VPCSGRQRRR*RRGGRSPCRSSPGPPARSPQ 93
Query: 85 TS*TAF 68
TS*TAF
Sbjct: 92 TS*TAF 75
Score = 71.2 bits (149), Expect(3) = 1e-029
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = -1 / -1
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HISFLH DQ LL D +VNLDV QG+PLEVHLA +HV I+K P
Sbjct: 316 HISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCP 179
Score = 53.8 bits (111), Expect(3) = 1e-029
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH* M SSS QSASCPM+ SPT SHQ
Sbjct: 401 *TCQSH*AMPSSSGQSASCPMNCSPTWSSHQ 309
Score = 45.1 bits (92), Expect(2) = 2e-021
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -1 / -1
Query: 435 PDGTTPLDLRQHDLEPVKVIE*C 367
PD ++PLDL +HDLEPVKVIE C
Sbjct: 442 PDSSSPLDLGKHDLEPVKVIERC 374
Score = 42.8 bits (87), Expect(3) = 1e-029
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1 / -1
Query: 114 HKGHSPDLHEPLERHFGCRR 55
H+GH PDLH+PLERHF R
Sbjct: 121 HQGHPPDLHKPLERHFAAAR 62
Score = 40.9 bits (83), Expect(2) = 2e-035
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
+NAVQEV GDRA GP ELRQG+
Sbjct: 73 RNAVQEVCGDRAGGPGELRQGL 138
>gb|BM377568.2|BM377568 EBem04_SQ003_I13_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_I13 5', mRNA sequence
Length = 591
Score = 286 bits (618), Expect = 1e-076
Identities = 119/129 (92%), Positives = 126/129 (97%)
Frame = +1 / +1
Query: 55 PPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSL 234
P + +MPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRAL+DAPDM+RCQMNFKRLSL
Sbjct: 61 PRSREMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQMNFKRLSL 240
Query: 235 TDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 414
TDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI
Sbjct: 241 TDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 420
Query: 415 KRGGAIRQE 441
KRGGAIRQE
Sbjct: 421 KRGGAIRQE 447
Score = 240 bits (518), Expect = 7e-063
Identities = 108/121 (89%), Positives = 111/121 (91%)
Frame = -2 / -2
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI A+MTLNLSKSLSDALLF TISFLPHELFSHL+FTSASSIALI V F G RLM
Sbjct: 437 IAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVAFLGIRLM 258
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSVRESRLKFIWQR MSGAS ALFWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 257 SILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 78
Query: 71 I 69
I
Sbjct: 77 I 75
Score = 139 bits (298), Expect = 2e-032
Identities = 70/123 (56%), Positives = 74/123 (60%)
Frame = +2 / +2
Query: 68 KCRSRGSWRSGEWPLXXXXXXXXXXXXXXXXXXXXGLLWMPPTWFVAK*TSSGFP*LTSR 247
KCRSRG WRSG WP G L M T A+*TSSG P* TSR
Sbjct: 74 KCRSRGLWRSGGWPW*TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSR 253
Query: 248 LTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTLTGSRSCWRRSRGVV 427
LT + S RR *S+ WRKLM*+ SGR HGARS*L RRG H SMTLTGSRSC RSRG
Sbjct: 254 LTSSGSLRRQL*SKLWRKLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEE 433
Query: 428 PSG 436
SG
Sbjct: 434 LSG 442
Score = 129 bits (276), Expect(2) = 8e-036
Identities = 63/108 (58%), Positives = 68/108 (62%)
Frame = +3 / +3
Query: 168 EQGSCGCPRHGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
EQG+ C H LP+ELQAA PD HQD*H P E +DQ GGS*CE QVGE MGQEA
Sbjct: 174 EQGTY*CTGHDPLPDELQAALPDRHQD*HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEA 353
Query: 348 DCSEEESITQ*L*QVQGHVGEDQEGWCHQARXXXXXXXXXXXLDCFGG 491
DC EEE I Q*L*QVQGH +DQEG +QA L FGG
Sbjct: 354 DCPEEEGIAQ*L*QVQGHACQDQEGRSYQAGASEA*EGGCRCLXHFGG 497
Score = 77.1 bits (162), Expect(2) = 6e-022
Identities = 38/66 (57%), Positives = 43/66 (65%)
Frame = -3 / -3
Query: 265 GHV*CQS*CQSGKAA*SSFGNEPCRGHPQEPCSXXXXXXXXXXGHTPCRSSQGPLARSPR 86
G *CQS*C+SG+AA*SS G+ C H PCS G +PCRSS GP ARSP+
Sbjct: 271 GSA*CQS*CRSGRAA*SSSGSGSCPVHQ*VPCSGRQRRR*RRGGRSPCRSSPGPPARSPQ 92
Query: 85 TS*TAF 68
TS*TAF
Sbjct: 91 TS*TAF 74
Score = 71.2 bits (149), Expect(3) = 1e-029
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = -1 / -1
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HISFLH DQ LL D +VNLDV QG+PLEVHLA +HV I+K P
Sbjct: 315 HISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCP 178
Score = 53.8 bits (111), Expect(3) = 1e-029
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3 / -3
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH* M SSS QSASCPM+ SPT SHQ
Sbjct: 400 *TCQSH*AMPSSSGQSASCPMNCSPTWSSHQ 308
Score = 46.4 bits (95), Expect(2) = 6e-022
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = -1 / -1
Query: 489 HQSNXXXXXXXXXXXXXLPDGTTPLDLRQHDLEPVKVIE*C 367
HQS+ LPD ++PLDL +HDLEPVKVIE C
Sbjct: 495 HQSDXSSGNLLLKLR*LLPDSSSPLDLGKHDLEPVKVIERC 373
Score = 42.8 bits (87), Expect(3) = 1e-029
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1 / -1
Query: 114 HKGHSPDLHEPLERHFGCRR 55
H+GH PDLH+PLERHF R
Sbjct: 120 HQGHPPDLHKPLERHFAAAR 61
Score = 40.9 bits (83), Expect(2) = 8e-036
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
+NAVQEV GDRA GP ELRQG+
Sbjct: 72 RNAVQEVCGDRAGGPGELRQGL 137
>gb|BM376611.2|BM376611 EBem05_SQ002_L09_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_L09 5', mRNA sequence
Length = 581
Score = 286 bits (618), Expect = 1e-076
Identities = 119/129 (92%), Positives = 126/129 (97%)
Frame = +1 / +2
Query: 55 PPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSL 234
P + +MPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRAL+DAPDM+RCQMNFKRLSL
Sbjct: 56 PRSREMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQMNFKRLSL 235
Query: 235 TDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 414
TDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI
Sbjct: 236 TDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 415
Query: 415 KRGGAIRQE 441
KRGGAIRQE
Sbjct: 416 KRGGAIRQE 442
Score = 240 bits (518), Expect = 7e-063
Identities = 108/121 (89%), Positives = 111/121 (91%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI A+MTLNLSKSLSDALLF TISFLPHELFSHL+FTSASSIALI V F G RLM
Sbjct: 432 IAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVAFLGIRLM 253
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSVRESRLKFIWQR MSGAS ALFWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 252 SILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 73
Query: 71 I 69
I
Sbjct: 72 I 70
Score = 139 bits (298), Expect = 2e-032
Identities = 70/123 (56%), Positives = 74/123 (60%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWPLXXXXXXXXXXXXXXXXXXXXGLLWMPPTWFVAK*TSSGFP*LTSR 247
KCRSRG WRSG WP G L M T A+*TSSG P* TSR
Sbjct: 69 KCRSRGLWRSGGWPW*TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSR 248
Query: 248 LTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTLTGSRSCWRRSRGVV 427
LT + S RR *S+ WRKLM*+ SGR HGARS*L RRG H SMTLTGSRSC RSRG
Sbjct: 249 LTSSGSLRRQL*SKLWRKLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEE 428
Query: 428 PSG 436
SG
Sbjct: 429 LSG 437
Score = 129 bits (276), Expect(2) = 8e-036
Identities = 63/108 (58%), Positives = 68/108 (62%)
Frame = +3 / +1
Query: 168 EQGSCGCPRHGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
EQG+ C H LP+ELQAA PD HQD*H P E +DQ GGS*CE QVGE MGQEA
Sbjct: 169 EQGTY*CTGHDPLPDELQAALPDRHQD*HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEA 348
Query: 348 DCSEEESITQ*L*QVQGHVGEDQEGWCHQARXXXXXXXXXXXLDCFGG 491
DC EEE I Q*L*QVQGH +DQEG +QA L FGG
Sbjct: 349 DCPEEEGIAQ*L*QVQGHACQDQEGRSYQAGASEA*EGGCRCLXHFGG 492
Score = 77.1 bits (162), Expect(2) = 6e-022
Identities = 38/66 (57%), Positives = 43/66 (65%)
Frame = -3 / -1
Query: 265 GHV*CQS*CQSGKAA*SSFGNEPCRGHPQEPCSXXXXXXXXXXGHTPCRSSQGPLARSPR 86
G *CQS*C+SG+AA*SS G+ C H PCS G +PCRSS GP ARSP+
Sbjct: 266 GSA*CQS*CRSGRAA*SSSGSGSCPVHQ*VPCSGRQRRR*RRGGRSPCRSSPGPPARSPQ 87
Query: 85 TS*TAF 68
TS*TAF
Sbjct: 86 TS*TAF 69
Score = 71.2 bits (149), Expect(3) = 1e-029
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = -1 / -2
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HISFLH DQ LL D +VNLDV QG+PLEVHLA +HV I+K P
Sbjct: 310 HISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCP 173
Score = 53.8 bits (111), Expect(3) = 1e-029
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH* M SSS QSASCPM+ SPT SHQ
Sbjct: 395 *TCQSH*AMPSSSGQSASCPMNCSPTWSSHQ 303
Score = 46.4 bits (95), Expect(2) = 6e-022
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = -1 / -2
Query: 489 HQSNXXXXXXXXXXXXXLPDGTTPLDLRQHDLEPVKVIE*C 367
HQS+ LPD ++PLDL +HDLEPVKVIE C
Sbjct: 490 HQSDXSSGNLLLKLR*LLPDSSSPLDLGKHDLEPVKVIERC 368
Score = 42.8 bits (87), Expect(3) = 1e-029
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1 / -2
Query: 114 HKGHSPDLHEPLERHFGCRR 55
H+GH PDLH+PLERHF R
Sbjct: 115 HQGHPPDLHKPLERHFAAAR 56
Score = 40.9 bits (83), Expect(2) = 8e-036
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
+NAVQEV GDRA GP ELRQG+
Sbjct: 67 RNAVQEVCGDRAGGPGELRQGL 132
>gb|BI780084.2|BI780084 EBma08_SQ001_F19_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_F19 5', mRNA sequence
Length = 595
Score = 286 bits (618), Expect = 1e-076
Identities = 119/129 (92%), Positives = 126/129 (97%)
Frame = +1 / +3
Query: 55 PPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSL 234
P + +MPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRAL+DAPDM+RCQMNFKRLSL
Sbjct: 66 PRSREMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQMNFKRLSL 245
Query: 235 TDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 414
TDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI
Sbjct: 246 TDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 425
Query: 415 KRGGAIRQE 441
KRGGAIRQE
Sbjct: 426 KRGGAIRQE 452
Score = 240 bits (518), Expect = 7e-063
Identities = 108/121 (89%), Positives = 111/121 (91%)
Frame = -2 / -1
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI A+MTLNLSKSLSDALLF TISFLPHELFSHL+FTSASSIALI V F G RLM
Sbjct: 442 IAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVAFLGIRLM 263
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSVRESRLKFIWQR MSGAS ALFWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 262 SILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 83
Query: 71 I 69
I
Sbjct: 82 I 80
Score = 139 bits (298), Expect = 2e-032
Identities = 70/123 (56%), Positives = 74/123 (60%)
Frame = +2 / +1
Query: 68 KCRSRGSWRSGEWPLXXXXXXXXXXXXXXXXXXXXGLLWMPPTWFVAK*TSSGFP*LTSR 247
KCRSRG WRSG WP G L M T A+*TSSG P* TSR
Sbjct: 79 KCRSRGLWRSGGWPW*TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSR 258
Query: 248 LTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTLTGSRSCWRRSRGVV 427
LT + S RR *S+ WRKLM*+ SGR HGARS*L RRG H SMTLTGSRSC RSRG
Sbjct: 259 LTSSGSLRRQL*SKLWRKLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEE 438
Query: 428 PSG 436
SG
Sbjct: 439 LSG 447
Score = 132 bits (283), Expect(2) = 9e-037
Identities = 64/108 (59%), Positives = 69/108 (63%)
Frame = +3 / +2
Query: 168 EQGSCGCPRHGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
EQG+ C H LP+ELQAA PD HQD*H P E +DQ GGS*CE QVGE MGQEA
Sbjct: 179 EQGTY*CTGHDPLPDELQAALPDRHQD*HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEA 358
Query: 348 DCSEEESITQ*L*QVQGHVGEDQEGWCHQARXXXXXXXXXXXLDCFGG 491
DC EEE I Q*L*QVQGH +DQEG +QA LD FGG
Sbjct: 359 DCPEEEGIAQ*L*QVQGHACQDQEGRSYQAGASEA*EGGCRCLDHFGG 502
Score = 77.1 bits (162), Expect(2) = 6e-022
Identities = 38/66 (57%), Positives = 43/66 (65%)
Frame = -3 / -2
Query: 265 GHV*CQS*CQSGKAA*SSFGNEPCRGHPQEPCSXXXXXXXXXXGHTPCRSSQGPLARSPR 86
G *CQS*C+SG+AA*SS G+ C H PCS G +PCRSS GP ARSP+
Sbjct: 276 GSA*CQS*CRSGRAA*SSSGSGSCPVHQ*VPCSGRQRRR*RRGGRSPCRSSPGPPARSPQ 97
Query: 85 TS*TAF 68
TS*TAF
Sbjct: 96 TS*TAF 79
Score = 71.2 bits (149), Expect(3) = 1e-029
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = -1 / -3
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HISFLH DQ LL D +VNLDV QG+PLEVHLA +HV I+K P
Sbjct: 320 HISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCP 183
Score = 53.8 bits (111), Expect(3) = 1e-029
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3 / -2
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH* M SSS QSASCPM+ SPT SHQ
Sbjct: 405 *TCQSH*AMPSSSGQSASCPMNCSPTWSSHQ 313
Score = 46.4 bits (95), Expect(2) = 6e-022
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = -1 / -3
Query: 489 HQSNXXXXXXXXXXXXXLPDGTTPLDLRQHDLEPVKVIE*C 367
HQS+ LPD ++PLDL +HDLEPVKVIE C
Sbjct: 500 HQSDLSSGNLLLKLR*LLPDSSSPLDLGKHDLEPVKVIERC 378
Score = 42.8 bits (87), Expect(3) = 1e-029
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1 / -3
Query: 114 HKGHSPDLHEPLERHFGCRR 55
H+GH PDLH+PLERHF R
Sbjct: 125 HQGHPPDLHKPLERHFAAAR 66
Score = 40.9 bits (83), Expect(2) = 9e-037
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +2
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
+NAVQEV GDRA GP ELRQG+
Sbjct: 77 RNAVQEVCGDRAGGPGELRQGL 142
>gb|BM100980.2|BM100980 EBpi01_SQ002_H24_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ002_H24 5', mRNA sequence
Length = 638
Score = 286 bits (618), Expect = 1e-076
Identities = 121/130 (93%), Positives = 126/130 (96%)
Frame = +1 / +2
Query: 52 APPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLS 231
A AAKMPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRALVDAPDM+RCQMNFKRLS
Sbjct: 41 AAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLS 220
Query: 232 LTDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 411
LTDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAK
Sbjct: 221 LTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAK 400
Query: 412 IKRGGAIRQE 441
I+ GGAIRQE
Sbjct: 401 IRGGGAIRQE 430
Score = 234 bits (505), Expect = 4e-061
Identities = 107/134 (79%), Positives = 112/134 (83%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APP LI ANMTLNLSKS SDALLF*TISFLP ELFSHL+FTSASS+ALI V F G RLM
Sbjct: 420 IAPPPLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSMALIKVAFLGIRLM 241
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSV E RLKFIW +SGAST A FWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 240 SILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 61
Query: 71 ILAAGGAVSASNTA 30
I AA A + S TA
Sbjct: 60 IFAAAAAAARSETA 19
Score = 124 bits (265), Expect(2) = 1e-033
Identities = 53/82 (64%), Positives = 65/82 (79%)
Frame = +3 / +1
Query: 195 HGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEADCSEEESIT 374
+ +P+ELQA+F D HQD*H P++ DQG+GGS*CE Q+GE L+GQEA CSEE+SI
Sbjct: 184 YDQVPDELQASFTDRHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIA 363
Query: 375 Q*L*QVQGHVGEDQEGWCHQAR 440
+*L*QVQGHVG D GWC+QAR
Sbjct: 364 E*L*QVQGHVG*D*RGWCYQAR 429
Score = 107 bits (229), Expect(2) = 1e-026
Identities = 54/77 (70%), Positives = 58/77 (75%)
Frame = +2 / +3
Query: 206 AK*TSSGFP*LTSRLTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTL 385
A+*TSS F * TSRLT +VS +R *SR WRKLM*K +GR A GARS LFRR EH MTL
Sbjct: 195 AR*TSSVFH*PTSRLTSSVSPKRQL*SRPWRKLM*KPNGRTAPGARSLLFRREEHR*MTL 374
Query: 386 TGSRSCWRRSRGVVPSG 436
TGSRSCW R GVV SG
Sbjct: 375 TGSRSCWLRLEGVVLSG 425
Score = 67.0 bits (140), Expect(3) = 1e-026
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1 / -2
Query: 312 FHISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
FHISFLH LDQ L DT +VNLDV Q K LEVHLA +H+ + + P
Sbjct: 301 FHISFLHGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECP 161
Score = 51.0 bits (105), Expect(3) = 1e-026
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH ML SSEQ ASCP S SP FSHQ
Sbjct: 383 *TCQSHSAMLFSSEQ*ASCPRSCSPIWFSHQ 291
Score = 39.1 bits (79), Expect(3) = 1e-026
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / -2
Query: 114 HKGHSPDLHEPLERHFGCRRGGVGEQHG 31
H+GH PDL EPLERH GG E+ G
Sbjct: 103 HQGHPPDLDEPLERHLCGGCGGGEERDG 20
Score = 38.6 bits (78), Expect(2) = 1e-033
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
++AVQEVR DRA GP ELRQG+
Sbjct: 55 KDAVQEVRRDRAGGPGELRQGL 120
Score = 31.8 bits (63), Expect(2) = 1e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWP 109
+CRSRGS RSG WP
Sbjct: 57 RCRSRGSSRSGGWP 98
>gb|BM101137.2|BM101137 EBpi01_SQ002_P21_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ002_P21 5', mRNA sequence
Length = 614
Score = 286 bits (618), Expect = 1e-076
Identities = 119/129 (92%), Positives = 126/129 (97%)
Frame = +1 / +2
Query: 55 PPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSL 234
P + +MPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRAL+DAPDM+RCQMNFKRLSL
Sbjct: 38 PRSREMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQMNFKRLSL 217
Query: 235 TDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 414
TDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI
Sbjct: 218 TDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 397
Query: 415 KRGGAIRQE 441
KRGGAIRQE
Sbjct: 398 KRGGAIRQE 424
Score = 240 bits (518), Expect = 7e-063
Identities = 108/121 (89%), Positives = 111/121 (91%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI A+MTLNLSKSLSDALLF TISFLPHELFSHL+FTSASSIALI V F G RLM
Sbjct: 414 IAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVAFLGIRLM 235
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSVRESRLKFIWQR MSGAS ALFWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 234 SILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 55
Query: 71 I 69
I
Sbjct: 54 I 52
Score = 139 bits (298), Expect = 2e-032
Identities = 70/123 (56%), Positives = 74/123 (60%)
Frame = +2 / +3
Query: 68 KCRSRGSWRSGEWPLXXXXXXXXXXXXXXXXXXXXGLLWMPPTWFVAK*TSSGFP*LTSR 247
KCRSRG WRSG WP G L M T A+*TSSG P* TSR
Sbjct: 51 KCRSRGLWRSGGWPW*TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSR 230
Query: 248 LTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTLTGSRSCWRRSRGVV 427
LT + S RR *S+ WRKLM*+ SGR HGARS*L RRG H SMTLTGSRSC RSRG
Sbjct: 231 LTSSGSLRRQL*SKLWRKLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEE 410
Query: 428 PSG 436
SG
Sbjct: 411 LSG 419
Score = 127 bits (273), Expect(2) = 2e-035
Identities = 59/90 (65%), Positives = 64/90 (71%)
Frame = +3 / +1
Query: 168 EQGSCGCPRHGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
EQG+ C H LP+ELQAA PD HQD*H P E +DQ GGS*CE QVGE MGQEA
Sbjct: 151 EQGTY*CTGHDPLPDELQAALPDRHQD*HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEA 330
Query: 348 DCSEEESITQ*L*QVQGHVGEDQEGWCHQA 437
DC EEE I Q*L*QVQGH +DQEG +QA
Sbjct: 331 DCPEEEGIAQ*L*QVQGHACQDQEGRSYQA 420
Score = 77.1 bits (162), Expect(2) = 2e-021
Identities = 38/66 (57%), Positives = 43/66 (65%)
Frame = -3 / -1
Query: 265 GHV*CQS*CQSGKAA*SSFGNEPCRGHPQEPCSXXXXXXXXXXGHTPCRSSQGPLARSPR 86
G *CQS*C+SG+AA*SS G+ C H PCS G +PCRSS GP ARSP+
Sbjct: 248 GSA*CQS*CRSGRAA*SSSGSGSCPVHQ*VPCSGRQRRR*RRGGRSPCRSSPGPPARSPQ 69
Query: 85 TS*TAF 68
TS*TAF
Sbjct: 68 TS*TAF 51
Score = 71.2 bits (149), Expect(3) = 1e-029
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = -1 / -2
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HISFLH DQ LL D +VNLDV QG+PLEVHLA +HV I+K P
Sbjct: 292 HISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCP 155
Score = 53.8 bits (111), Expect(3) = 1e-029
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH* M SSS QSASCPM+ SPT SHQ
Sbjct: 377 *TCQSH*AMPSSSGQSASCPMNCSPTWSSHQ 285
Score = 45.1 bits (92), Expect(2) = 2e-021
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -1 / -2
Query: 435 PDGTTPLDLRQHDLEPVKVIE*C 367
PD ++PLDL +HDLEPVKVIE C
Sbjct: 418 PDSSSPLDLGKHDLEPVKVIERC 350
Score = 42.8 bits (87), Expect(3) = 1e-029
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1 / -2
Query: 114 HKGHSPDLHEPLERHFGCRR 55
H+GH PDLH+PLERHF R
Sbjct: 97 HQGHPPDLHKPLERHFAAAR 38
Score = 40.9 bits (83), Expect(2) = 2e-035
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +1
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
+NAVQEV GDRA GP ELRQG+
Sbjct: 49 RNAVQEVCGDRAGGPGELRQGL 114
>gb|BM370559.2|BM370559 EBro08_SQ004_J13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_J13 5', mRNA sequence
Length = 595
Score = 286 bits (618), Expect = 1e-076
Identities = 119/129 (92%), Positives = 126/129 (97%)
Frame = +1 / +1
Query: 55 PPAAKMPFKRFVEIGRVALVNYGKEYGRLVVIVDVVDQNRALVDAPDMVRCQMNFKRLSL 234
P + +MPFKRFVEIGRVALVNYGK+YGRLVVIVDVVDQNRAL+DAPDM+RCQMNFKRLSL
Sbjct: 61 PRSREMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQMNFKRLSL 240
Query: 235 TDIKIDIKRVPKKTTLIKAMEEADVKSKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 414
TDIKIDIKR+PKK TLIKAMEEADVK+KWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI
Sbjct: 241 TDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKI 420
Query: 415 KRGGAIRQE 441
KRGGAIRQE
Sbjct: 421 KRGGAIRQE 447
Score = 240 bits (518), Expect = 7e-063
Identities = 108/121 (89%), Positives = 111/121 (91%)
Frame = -2 / -3
Query: 431 MAPPLLIFANMTLNLSKSLSDALLF*TISFLPHELFSHLLFTSASSIALISVVFFGTRLM 252
+APPLLI A+MTLNLSKSLSDALLF TISFLPHELFSHL+FTSASSIALI V F G RLM
Sbjct: 437 IAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSIALIRVAFLGIRLM 258
Query: 251 SILMSVRESRLKFIWQRTMSGASTRALFWSTTSTMTTRRPYSLP*FTRATRPISTNLLNG 72
SILMSVRESRLKFIWQR MSGAS ALFWSTTSTMTTRRP SLP*FTRATRPISTNLLNG
Sbjct: 257 SILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FTRATRPISTNLLNG 78
Query: 71 I 69
I
Sbjct: 77 I 75
Score = 139 bits (298), Expect = 2e-032
Identities = 70/123 (56%), Positives = 74/123 (60%)
Frame = +2 / +2
Query: 68 KCRSRGSWRSGEWPLXXXXXXXXXXXXXXXXXXXXGLLWMPPTWFVAK*TSSGFP*LTSR 247
KCRSRG WRSG WP G L M T A+*TSSG P* TSR
Sbjct: 74 KCRSRGLWRSGGWPW*TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSR 253
Query: 248 LTLNVSQRRLH*SRQWRKLM*KASGRIAHGARS*LFRRGEHHSMTLTGSRSCWRRSRGVV 427
LT + S RR *S+ WRKLM*+ SGR HGARS*L RRG H SMTLTGSRSC RSRG
Sbjct: 254 LTSSGSLRRQL*SKLWRKLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEE 433
Query: 428 PSG 436
SG
Sbjct: 434 LSG 442
Score = 132 bits (283), Expect(2) = 9e-037
Identities = 64/108 (59%), Positives = 69/108 (63%)
Frame = +3 / +3
Query: 168 EQGSCGCPRHGSLPNELQAAFPD*HQD*H*TCPKEDYTDQGNGGS*CEKQVGE*LMGQEA 347
EQG+ C H LP+ELQAA PD HQD*H P E +DQ GGS*CE QVGE MGQEA
Sbjct: 174 EQGTY*CTGHDPLPDELQAALPDRHQD*HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEA 353
Query: 348 DCSEEESITQ*L*QVQGHVGEDQEGWCHQARXXXXXXXXXXXLDCFGG 491
DC EEE I Q*L*QVQGH +DQEG +QA LD FGG
Sbjct: 354 DCPEEEGIAQ*L*QVQGHACQDQEGRSYQAGASEA*EGGCRCLDHFGG 497
Score = 77.1 bits (162), Expect(2) = 6e-022
Identities = 38/66 (57%), Positives = 43/66 (65%)
Frame = -3 / -1
Query: 265 GHV*CQS*CQSGKAA*SSFGNEPCRGHPQEPCSXXXXXXXXXXGHTPCRSSQGPLARSPR 86
G *CQS*C+SG+AA*SS G+ C H PCS G +PCRSS GP ARSP+
Sbjct: 271 GSA*CQS*CRSGRAA*SSSGSGSCPVHQ*VPCSGRQRRR*RRGGRSPCRSSPGPPARSPQ 92
Query: 85 TS*TAF 68
TS*TAF
Sbjct: 91 TS*TAF 74
Score = 71.2 bits (149), Expect(3) = 1e-029
Identities = 30/46 (65%), Positives = 34/46 (73%)
Frame = -1 / -2
Query: 309 HISFLHCLDQCSLLWDTFNVNLDVSQGKPLEVHLATNHVGGIHKSP 172
HISFLH DQ LL D +VNLDV QG+PLEVHLA +HV I+K P
Sbjct: 315 HISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCP 178
Score = 53.8 bits (111), Expect(3) = 1e-029
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -3 / -1
Query: 394 *TCQSH*VMLSSSEQSASCPMSYSPTCFSHQ 302
*TCQSH* M SSS QSASCPM+ SPT SHQ
Sbjct: 400 *TCQSH*AMPSSSGQSASCPMNCSPTWSSHQ 308
Score = 46.4 bits (95), Expect(2) = 6e-022
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = -1 / -2
Query: 489 HQSNXXXXXXXXXXXXXLPDGTTPLDLRQHDLEPVKVIE*C 367
HQS+ LPD ++PLDL +HDLEPVKVIE C
Sbjct: 495 HQSDLSSGNLLLKLR*LLPDSSSPLDLGKHDLEPVKVIERC 373
Score = 42.8 bits (87), Expect(3) = 1e-029
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -1 / -2
Query: 114 HKGHSPDLHEPLERHFGCRR 55
H+GH PDLH+PLERHF R
Sbjct: 120 HQGHPPDLHKPLERHFAAAR 61
Score = 40.9 bits (83), Expect(2) = 9e-037
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 66 QNAVQEVRGDRASGPCELRQGV 131
+NAVQEV GDRA GP ELRQG+
Sbjct: 72 RNAVQEVCGDRAGGPGELRQGL 137
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 275,063,211
Number of Sequences: 312970
Number of extensions: 3448570
Number of successful extensions: 41484
Number of sequences better than 1.0e-020: 206
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 7550174202
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)