TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738955.2.1
(1271 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF621546.3|BF621546 HVSMEa0011F20f Hordeum vulgare seedl... 418 e-116
gb|CA001705.1|CA001705 HS05F12r HS Hordeum vulgare subsp. v... 378 e-104
gb|BF626312.1|BF626312 HVSMEa0018F04f Hordeum vulgare seedl... 262 4e-099
gb|BJ454545.1|BJ454545 BJ454545 K. Sato unpublished cDNA li... 358 3e-098
gb|BJ462348.1|BJ462348 BJ462348 K. Sato unpublished cDNA li... 342 5e-097
gb|CA006626.1|CA006626 HU05D17r HU Hordeum vulgare subsp. v... 279 2e-096
gb|BF622346.3|BF622346 HVSMEa0002O08f Hordeum vulgare seedl... 340 3e-096
gb|BI960235.1|BI960235 HVSMEn0023N12f Hordeum vulgare rachi... 249 2e-093
gb|BQ465629.1|BQ465629 HU04D11r HU Hordeum vulgare subsp. v... 330 3e-093
gb|BI958334.1|BI958334 HVSMEn0014H08f Hordeum vulgare rachi... 230 2e-089
gb|CA005047.1|CA005047 HU12E04u HU Hordeum vulgare subsp. v... 323 1e-087
gb|BQ768669.1|BQ768669 EBro08_SQ012_H11_R root, 3 week, dro... 218 6e-086
gb|CA031352.1|CA031352 HX09L09r HX Hordeum vulgare subsp. v... 200 5e-085
gb|BF253497.3|BF253497 HVSMEf0001B16f Hordeum vulgare seedl... 259 1e-084
gb|CA023510.1|CA023510 HZ46H12r HZ Hordeum vulgare subsp. v... 276 2e-079
gb|CA024803.1|CA024803 HZ50F17r HZ Hordeum vulgare subsp. v... 200 1e-076
gb|BE215000.1|BE215000 HV_CEb0005H19f Hordeum vulgare seedl... 180 1e-075
gb|BQ760682.1|BQ760682 EBro03_SQ003_C23_R root, 3 week, wat... 189 3e-075
gb|BG368613.1|BG368613 HVSMEi0019P07f Hordeum vulgare 20 DA... 280 1e-074
gb|BQ766646.1|BQ766646 EBro08_SQ006_P15_R root, 3 week, dro... 275 4e-073
gb|BI957345.1|BI957345 HVSMEn0009B08f Hordeum vulgare rachi... 200 4e-072
gb|BI957392.1|BI957392 HVSMEn0009F06f Hordeum vulgare rachi... 180 2e-071
gb|AL503556.1|AL503556 AL503556 Hordeum vulgare Barke roots... 120 3e-071
gb|AV917412.1|AV917412 AV917412 K. Sato unpublished cDNA li... 268 6e-071
gb|BF065271.3|BF065271 HV_CEb0024O07f Hordeum vulgare seedl... 111 2e-070
gb|BF619242.3|BF619242 HVSMEc0015J01f Hordeum vulgare seedl... 263 1e-069
gb|CA022537.1|CA022537 HZ43I17r HZ Hordeum vulgare subsp. v... 262 4e-069
gb|BU990530.1|BU990530 HF25F05r HF Hordeum vulgare subsp. v... 260 1e-068
gb|BU989542.1|BU989542 HF22A11r HF Hordeum vulgare subsp. v... 231 2e-064
gb|BU990552.1|BU990552 HF25G07r HF Hordeum vulgare subsp. v... 231 2e-064
gb|BQ766938.1|BQ766938 EBro08_SQ007_D18_R root, 3 week, dro... 182 8e-064
gb|BF256452.2|BF256452 HVSMEf0010A02f Hordeum vulgare seedl... 197 1e-063
gb|BQ762357.1|BQ762357 EBro01_SQ005_H18_R root, 3 week, hyd... 226 3e-062
gb|CA025602.1|CA025602 HZ52K01r HZ Hordeum vulgare subsp. v... 180 3e-062
gb|CA017256.1|CA017256 HV14F10u HV Hordeum vulgare subsp. v... 237 1e-061
gb|BU989257.1|BU989257 HF21D19r HF Hordeum vulgare subsp. v... 226 2e-060
gb|BQ461074.1|BQ461074 HE01E19r HE Hordeum vulgare subsp. v... 202 4e-060
gb|BF257120.2|BF257120 HVSMEf0011O18f Hordeum vulgare seedl... 120 6e-060
gb|BG368084.2|BG368084 HVSMEi0015J17f Hordeum vulgare 20 DA... 150 7e-059
gb|BQ663324.1|BQ663324 HU02C09u HU Hordeum vulgare subsp. v... 121 6e-057
gb|BI953531.1|BI953531 HVSMEm0013B19f Hordeum vulgare green... 219 3e-056
gb|CA017681.1|CA017681 HV05O14r HV Hordeum vulgare subsp. v... 136 6e-055
gb|AV922591.1|AV922591 AV922591 K. Sato unpublished cDNA li... 209 3e-053
gb|BI777322.2|BI777322 EBro03_SQ002_N24_R root, 3 week, wat... 207 9e-053
gb|AV913816.1|AV913816 AV913816 K. Sato unpublished cDNA li... 112 9e-052
gb|BJ464959.1|BJ464959 BJ464959 K. Sato unpublished cDNA li... 112 9e-052
gb|AV916436.1|AV916436 AV916436 K. Sato unpublished cDNA li... 203 2e-051
gb|CA009609.1|CA009609 HU14J18r HU Hordeum vulgare subsp. v... 120 2e-050
gb|CK124288.1|CK124288 BES1824108e08 BES1824 Hordeum vulgar... 154 7e-050
gb|CA025455.1|CA025455 HZ52D12r HZ Hordeum vulgare subsp. v... 190 2e-047
gb|BI779583.2|BI779583 EBro01_SQ004_H20_R root, 3 week, hyd... 124 3e-047
gb|BI957701.1|BI957701 HVSMEn0010L18f Hordeum vulgare rachi... 112 1e-044
gb|BI951147.1|BI951147 HVSMEl0024K11f Hordeum vulgare spike... 176 2e-043
gb|BF629000.2|BF629000 HVSMEb0009I04f Hordeum vulgare seedl... 103 7e-041
gb|BJ468536.1|BJ468536 BJ468536 K. Sato unpublished cDNA li... 165 6e-040
gb|BF260514.2|BF260514 HVSMEf0022D10f Hordeum vulgare seedl... 109 1e-039
gb|AL501964.1|AL501964 AL501964 Hordeum vulgare Barke roots... 161 8e-039
gb|BQ463996.1|BQ463996 HF01B01T HF Hordeum vulgare subsp. v... 161 8e-039
gb|AV921430.1|AV921430 AV921430 K. Sato unpublished cDNA li... 112 1e-038
gb|BU980607.1|BU980607 HA21C12r HA Hordeum vulgare subsp. v... 100 1e-037
gb|BI950759.1|BI950759 HVSMEl0023B18f Hordeum vulgare spike... 116 1e-036
gb|BI956638.1|BI956638 HVSMEn0004I04f Hordeum vulgare rachi... 120 3e-036
gb|AL505514.1|AL505514 AL505514 Hordeum vulgare Barke roots... 105 5e-036
gb|BJ465292.1|BJ465292 BJ465292 K. Sato unpublished cDNA li... 149 3e-035
gb|BG300056.1|BG300056 HVSMEb0011D11f Hordeum vulgare seedl... 103 2e-034
gb|BQ461095.1|BQ461095 HE01D18r HE Hordeum vulgare subsp. v... 112 3e-033
emb|AJ234766.1|HVU234766 Hordeum vulgare genomic DNA fragme... 85 5e-033
gb|BG343293.2|BG343293 HVSMEg0005F10f Hordeum vulgare pre-a... 112 2e-029
gb|BI960698.1|BI960698 HVSMEn0025O13f Hordeum vulgare rachi... 99 3e-029
gb|BI959362.1|BI959362 HVSMEn0019G01f Hordeum vulgare rachi... 108 7e-029
gb|AL500971.1|AL500971 AL500971 Hordeum vulgare Barke roots... 110 1e-027
gb|BI957889.1|BI957889 HVSMEn0011P08f Hordeum vulgare rachi... 116 2e-027
gb|BG301240.1|BG301240 HVSMEb0020C04f Hordeum vulgare seedl... 121 8e-027
gb|BU987886.1|BU987886 HF16A18r HF Hordeum vulgare subsp. v... 116 4e-025
gb|CA020777.1|CA020777 HZ37K23r HZ Hordeum vulgare subsp. v... 112 4e-024
gb|CB875905.1|CB875905 HX09L09w HX Hordeum vulgare subsp. v... 112 4e-024
gb|CA002659.1|CA002659 HS08C15r HS Hordeum vulgare subsp. v... 111 6e-024
gb|BQ765644.1|BQ765644 EBro03_SQ007_C21_R root, 3 week, wat... 87 6e-024
gb|BQ760589.1|BQ760589 EBro03_SQ001_N06_R root, 3 week, wat... 80 2e-023
gb|BF622348.3|BF622348 HVSMEa0002O10f Hordeum vulgare seedl... 71 6e-023
gb|AV917956.1|AV917956 AV917956 K. Sato unpublished cDNA li... 108 6e-023
gb|BI950803.1|BI950803 HVSMEl0023D24f Hordeum vulgare spike... 107 1e-022
gb|BQ468086.1|BQ468086 HR01O13r HR Hordeum vulgare subsp. v... 85 2e-022
gb|BI958257.1|BI958257 HVSMEn0014B22f Hordeum vulgare rachi... 102 4e-021
gb|BQ660413.1|BQ660413 HI02G15u HI Hordeum vulgare subsp. v... 102 4e-021
>gb|BF621546.3|BF621546 HVSMEa0011F20f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0011F20f, mRNA sequence
Length = 825
Score = 418 bits (906), Expect = e-116
Identities = 166/219 (75%), Positives = 178/219 (81%)
Frame = -1 / +3
Query: 1145 RAAGVDYGSWQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACG 966
+AA YG WQSAHATFY GYGN+YSTGYGTNTAALSTALFNDGAACG
Sbjct: 156 QAAAGGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACG 335
Query: 965 SCYELRCDNNGQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQ 786
SCYELRCDN G SC PG+I VTATNFCPPNYGLPSDDGGWCNPPRPHFDMA+PAFL IAQ
Sbjct: 336 SCYELRCDNAGSSCRPGSIMVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQ 515
Query: 785 YRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPM 606
YRAGIVPV+YRRVPCVKKGGIRFTINGHSYFNLVLVTNV GAGD +SV IKG+ TGWQ M
Sbjct: 516 YRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVXGAGDARSVFIKGTRTGWQAM 695
Query: 605 SRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPA 489
SRNWG NWQSN+ L Q LSF+VT+ D + + PA
Sbjct: 696 SRNWGMNWQSNTFLGRQCLSFKVTSRDXXPLPATPPRPA 812
Score = 331 bits (718), Expect(3) = 6e-097
Identities = 141/174 (81%), Positives = 148/174 (85%)
Frame = +1 / -3
Query: 526 SLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLEPLMDTDCTSPAPATLVTSTRLK*EW 705
SL VT K+R W R LLCQF PQLRDM C PV PLM+T+ SPAP TLVTSTRLK*EW
Sbjct: 775 SLEVTLKERHWRPRKVLLCQFMPQLRDMACQPVRVPLMNTERASPAPXTLVTSTRLK*EW 596
Query: 706 PLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGWAMSKCGRGGLHQPPSSLGRP*LGG 885
PLMVN +PPFFTHGTLL* TGTMPARYCA+WRKAG AMSK GRGGLHQPPSSLGRP*LGG
Sbjct: 595 PLMVNRMPPFFTHGTLL*ETGTMPARYCAMWRKAGSAMSKWGRGGLHQPPSSLGRP*LGG 416
Query: 886 QKLVAVTVMVPGRHDCPLLSQRSS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP 1047
QKLVAVT+M PGRH+ P LSQRSS* DPHAAPSLNSAVLSAAV VPYPVLY P
Sbjct: 415 QKLVAVTMMDPGRHELPALSQRSS*HDPHAAPSLNSAVLSAAVFVPYPVLYRLP 254
Score = 80.8 bits (170), Expect(3) = 1e-021
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +3 / -2
Query: 711 DGEPDPALLHARHPPVGDGHDAGAVLRDLEEGRLGH 818
DGEPD LLHARHP VGDG+DAGAVLRD+EEGRLGH
Sbjct: 590 DGEPDAPLLHARHPSVGDGYDAGAVLRDVEEGRLGH 483
Score = 35.0 bits (70), Expect(3) = 6e-097
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1 / -3
Query: 1099 VAWALCHEP*STPAARWAREQKAEQS 1176
VAWALCH P* AA AR K E++
Sbjct: 202 VAWALCHPP*PPAAACRARRHKEEKT 125
Score = 34.1 bits (68), Expect(3) = 1e-021
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 806 PAGPCRSAGAAGCT 847
PA PCRS GAAGCT
Sbjct: 495 PARPCRSGGAAGCT 454
Score = 28.1 bits (55), Expect(3) = 6e-097
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / -1
Query: 481 CQPAGATPLLVTVR 522
CQP GA LLVTVR
Sbjct: 819 CQPPGAAALLVTVR 778
Score = 26.3 bits (51), Expect(3) = 1e-021
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3 / -2
Query: 540 LEGQALAVEERVALPV 587
L+G+ALA +E VALPV
Sbjct: 761 LKGEALASQEGVALPV 714
>gb|CA001705.1|CA001705 HS05F12r HS Hordeum vulgare subsp. vulgare cDNA clone HS05F12
5-PRIME, mRNA sequence
Length = 520
Score = 378 bits (820), Expect = e-104
Identities = 145/162 (89%), Positives = 152/162 (93%)
Frame = -1 / +1
Query: 1049 YGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNNGQSCLPGTITVTATNFCPPNYG 870
YGN+YSTGYGTNTAALSTALFNDGAACGSCYELRCDN G SC PG+I VTATNFCPPNYG
Sbjct: 34 YGNLYSTGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCRPGSIMVTATNFCPPNYG 213
Query: 869 LPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFN 690
LPSDDGGWCNPPRPHFDMA+PAFL IAQYRAGIVPV+YRRVPCVKKGGIRFTINGHSYFN
Sbjct: 214 LPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFN 393
Query: 689 LVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLL 564
LVLVTNVAGAGD +SVSIKG+ TGWQ MSRNWG NWQSN+ L
Sbjct: 394 LVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSNTFL 519
Score = 321 bits (696), Expect = 4e-087
Identities = 136/161 (84%), Positives = 141/161 (87%)
Frame = +1 / -3
Query: 565 RSELLCQFWPQLRDMGCHPVLEPLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTH 744
R LLCQF PQLRDM C PV PLMDT+ SPAPATLVTSTRLK*EWPLMVN +PPFFTH
Sbjct: 518 RKVLLCQFMPQLRDMACQPVRVPLMDTERASPAPATLVTSTRLK*EWPLMVNRMPPFFTH 339
Query: 745 GTLL*ATGTMPARYCAIWRKAGWAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGR 924
GTLL* TGTMPARYCA+WRKAG AMSK GRGGLHQPPSSLGRP*LGGQKLVAVT+M PGR
Sbjct: 338 GTLL*ETGTMPARYCAMWRKAGSAMSKWGRGGLHQPPSSLGRP*LGGQKLVAVTMMDPGR 159
Query: 925 HDCPLLSQRSS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP 1047
H+ P LSQRSS* DPHAAPSLNSAVLSAAV VPYPVLY P
Sbjct: 158 HELPALSQRSS*HDPHAAPSLNSAVLSAAVFVPYPVLYRLP 36
>gb|BF626312.1|BF626312 HVSMEa0018F04f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0018F04f, mRNA sequence
Length = 773
Score = 262 bits (566), Expect(2) = 4e-099
Identities = 99/118 (83%), Positives = 108/118 (91%)
Frame = -1 / +1
Query: 935 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 756
G SC+PG+IT+TATN CPPNY LP+DDGGWCNPPR H DMA+PA+LQI YRAGIVPV+Y
Sbjct: 304 GSSCVPGSITITATNLCPPNYALPNDDGGWCNPPRAHCDMAEPAYLQIGIYRAGIVPVSY 483
Query: 755 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNW 582
RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSS+GWQ M +WGQNW
Sbjct: 484 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSSGWQAMCPHWGQNW 657
Score = 218 bits (471), Expect(3) = 4e-073
Identities = 92/118 (77%), Positives = 98/118 (83%)
Frame = +1 / -1
Query: 583 QFWPQLRDMGCHPVLEPLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*A 762
QF PQ M CHP L+PLM+TDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFT GTL *
Sbjct: 656 QF*PQCGHMACHPELDPLMETDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTQGTLR*E 477
Query: 763 TGTMPARYCAIWRKAGWAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDCP 936
TGTMPAR IWR AG AMS+C RGGLHQPPSSLG *LGGQ+LVAV VM+PG H+ P
Sbjct: 476 TGTMPAR*IPIWR*AGSAMSQCARGGLHQPPSSLGSA*LGGQRLVAVMVMLPGTHELP 303
Score = 120 bits (257), Expect(2) = 4e-099
Identities = 48/70 (68%), Positives = 52/70 (74%)
Frame = -1 / +1
Query: 1145 RAAGVDYGSWQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACG 966
R A DYGSWQ+AHATFY GYGN+YSTGYGTNTAALSTALFNDGAACG
Sbjct: 100 RRAAGDYGSWQTAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACG 279
Query: 965 SCYELRCDNN 936
SCYEL+C +
Sbjct: 280 SCYELKCQGS 309
Score = 63.8 bits (133), Expect(3) = 4e-073
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +1 / -1
Query: 952 SS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP* 1050
SS* DPHAAPSLNSAVLSAAV VP PVLY FP*
Sbjct: 293 SS*HDPHAAPSLNSAVLSAAVFVP*PVLYRFP* 195
Score = 32.7 bits (65), Expect(3) = 4e-073
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1 / -1
Query: 1099 VAWALCHEP*STPAARWAREQKAEQS 1176
VA A+CHEP*S A R +++ AE+S
Sbjct: 146 VACAVCHEP*SPAARRARKQKAAEKS 69
>gb|BJ454545.1|BJ454545 BJ454545 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak24n09 5', mRNA sequence
Length = 654
Score = 358 bits (775), Expect(2) = 3e-098
Identities = 138/162 (85%), Positives = 149/162 (91%)
Frame = -1 / +1
Query: 935 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 756
G SC+PG+IT+TATN CPPNY LP+DDGGWCNPPR HFDMA+PA+LQI YRAGIVPV+Y
Sbjct: 28 GSSCVPGSITITATNLCPPNYALPNDDGGWCNPPRAHFDMAEPAYLQIGIYRAGIVPVSY 207
Query: 755 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQS 576
RRVPCVKKGG+RFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSS+GWQ MSRNWGQNWQS
Sbjct: 208 RRVPCVKKGGMRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSSGWQAMSRNWGQNWQS 387
Query: 575 NSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 450
N+ LDGQSLSF+VT SDGRTVTSN APAGW FGQTFEG QF
Sbjct: 388 NADLDGQSLSFRVTLSDGRTVTSNNAAPAGWSFGQTFEGGQF 513
Score = 308 bits (668), Expect = 3e-083
Identities = 130/162 (80%), Positives = 136/162 (83%)
Frame = +1 / -2
Query: 451 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLE 630
NW PSKV P QPAGA LLVTVRPSL VT K+RLWPSRS LLCQFWPQLRDM CHP L+
Sbjct: 512 NWPPSKVCPKDQPAGAALLLVTVRPSLRVTRKERLWPSRSALLCQFWPQLRDMACHPELD 333
Query: 631 PLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAG 810
PLM+TDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFT GTL * TGTMPAR IWR AG
Sbjct: 332 PLMETDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTQGTLR*ETGTMPAR*IPIWR*AG 153
Query: 811 WAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDCP 936
AMSK RGGLHQPPSSLG *LGGQ+LVAV VM+PG H+ P
Sbjct: 152 SAMSKWARGGLHQPPSSLGSA*LGGQRLVAVMVMLPGTHELP 27
Score = 22.1 bits (42), Expect(2) = 3e-098
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 364 AIPRLLIISTRL 329
AI RLL+ISTRL
Sbjct: 618 AILRLLLISTRL 653
>gb|BJ462348.1|BJ462348 BJ462348 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak24n09 3', mRNA sequence
Length = 720
Score = 342 bits (742), Expect(2) = 5e-097
Identities = 133/155 (85%), Positives = 143/155 (92%)
Frame = -1 / -3
Query: 914 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 735
+IT+TATN CPPNY LP+DDGGWCNPPR HFDMA+PA+LQI YRAGIVPV+YRRVPCVK
Sbjct: 718 SITITATNLCPPNYALPNDDGGWCNPPRAHFDMAEPAYLQIGIYRAGIVPVSYRRVPCVK 539
Query: 734 KGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQ 555
KGG+RFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSS+GWQ MSRNWGQNWQSN+ LDGQ
Sbjct: 538 KGGMRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSSGWQAMSRNWGQNWQSNADLDGQ 359
Query: 554 SLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 450
SLSF+VT SDGRTVTSN APAGW FGQTFEG QF
Sbjct: 358 SLSFRVTLSDGRTVTSNNAAPAGWSFGQTFEGGQF 254
Score = 296 bits (640), Expect(2) = 8e-082
Identities = 126/155 (81%), Positives = 131/155 (84%)
Frame = +1 / +3
Query: 451 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLE 630
NW PSKV P QPAGA LLVTVRPSL VT K+RLWPSRS LLCQFWPQLRDM CHP L+
Sbjct: 255 NWPPSKVCPKDQPAGAALLLVTVRPSLRVTRKERLWPSRSALLCQFWPQLRDMACHPELD 434
Query: 631 PLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAG 810
PLM+TDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFT GTL * TGTMPAR IWR AG
Sbjct: 435 PLMETDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTQGTLR*ETGTMPAR*IPIWR*AG 614
Query: 811 WAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMV 915
AMSK RGGLHQPPSSLG *LGGQ+LVAV VM+
Sbjct: 615 SAMSKWARGGLHQPPSSLGSA*LGGQRLVAVMVML 719
Score = 33.1 bits (66), Expect(2) = 5e-097
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -2 / -2
Query: 364 AIPRLLIISTRLGISFSY 311
AI RLL+ISTRLG+SFS+
Sbjct: 149 AILRLLLISTRLGLSFSH 96
Score = 29.0 bits (57), Expect(2) = 8e-082
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2 / +3
Query: 311 IREGNA*AGANNKQPRN 361
+REG A*AGA+ +QP+N
Sbjct: 96 MREGKA*AGADQQQPQN 146
>gb|CA006626.1|CA006626 HU05D17r HU Hordeum vulgare subsp. vulgare cDNA clone HU05D17
5-PRIME, mRNA sequence
Length = 534
Score = 279 bits (603), Expect(2) = 2e-096
Identities = 105/121 (86%), Positives = 114/121 (94%)
Frame = -1 / +3
Query: 935 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 756
G SC+PG+IT+TATN CPPNY LP+DDGGWCNPPR HFDMA+PA+LQI YRAGIVPV+Y
Sbjct: 171 GSSCVPGSITITATNLCPPNYALPNDDGGWCNPPRAHFDMAEPAYLQIGIYRAGIVPVSY 350
Query: 755 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQS 576
RRVPCVKKGG+RFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSS+GWQ MSRNWGQNWQS
Sbjct: 351 RRVPCVKKGGMRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSSGWQAMSRNWGQNWQS 530
Query: 575 N 573
N
Sbjct: 531 N 533
Score = 238 bits (515), Expect(2) = 4e-075
Identities = 99/121 (81%), Positives = 104/121 (85%)
Frame = +1 / -3
Query: 574 LLCQFWPQLRDMGCHPVLEPLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTL 753
LLCQFWPQLRDM CHP L+PLM+TDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFT GTL
Sbjct: 532 LLCQFWPQLRDMACHPELDPLMETDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTQGTL 353
Query: 754 L*ATGTMPARYCAIWRKAGWAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDC 933
* TGTMPAR IWR AG AMSK RGGLHQPPSSLG *LGGQ+LVAV VM+PG H+
Sbjct: 352 R*ETGTMPAR*IPIWR*AGSAMSKWARGGLHQPPSSLGSA*LGGQRLVAVMVMLPGTHEL 173
Query: 934 P 936
P
Sbjct: 172 P 170
Score = 94.5 bits (200), Expect(2) = 2e-096
Identities = 38/58 (65%), Positives = 41/58 (70%)
Frame = -1 / +3
Query: 1109 AHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNN 936
A TFY GYGN+YSTGYGTNTAALSTALFNDGAACGSCYEL+C +
Sbjct: 3 ARGTFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACGSCYELKCQGS 176
Score = 63.8 bits (133), Expect(2) = 4e-075
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +1 / -3
Query: 952 SS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP* 1050
SS* DPHAAPSLNSAVLSAAV VP PVLY FP*
Sbjct: 160 SS*HDPHAAPSLNSAVLSAAVFVP*PVLYRFP* 62
>gb|BF622346.3|BF622346 HVSMEa0002O08f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0002O08f, mRNA sequence
Length = 844
Score = 340 bits (736), Expect(2) = 3e-096
Identities = 134/167 (80%), Positives = 141/167 (84%)
Frame = -1 / +3
Query: 1145 RAAGVDYGSWQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACG 966
+AA YG WQSAHATFY GYGN+YSTGYGTNTAALSTALFNDGAACG
Sbjct: 156 QAAAGGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACG 335
Query: 965 SCYELRCDNNGQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQ 786
SCYELRCDN G SC PG+I VTATNFCPPNYGLPSDDGGWCNPPRPH DMA+PAFL IAQ
Sbjct: 336 SCYELRCDNAGSSCRPGSIMVTATNFCPPNYGLPSDDGGWCNPPRPHLDMAEPAFLHIAQ 515
Query: 785 YRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQS 645
YRAGIVP++YRRVPCVKKGGIRFTINGHSY NL LVTNVAGAGD +S
Sbjct: 516 YRAGIVPLSYRRVPCVKKGGIRFTINGHSYLNLGLVTNVAGAGDARS 656
Score = 266 bits (576), Expect(3) = 1e-076
Identities = 113/131 (86%), Positives = 117/131 (89%)
Frame = +1 / -1
Query: 655 SPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGWAMSKCGR 834
SPAPATLVTS R K*EWPLMVN +PPFFTHGTLL* GTMPARYCA+WRKAG AMSK GR
Sbjct: 646 SPAPATLVTSPRFK*EWPLMVNRMPPFFTHGTLL*ERGTMPARYCAMWRKAGSAMSKWGR 467
Query: 835 GGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDCPLLSQRSS*QDPHAAPSLNSAVLSAAV 1014
GGLHQPPSSLGRP*LGGQKLVAVT+M PGRH+ P LSQRSS* DPHAAPSLNSAVLSAAV
Sbjct: 466 GGLHQPPSSLGRP*LGGQKLVAVTMMDPGRHELPALSQRSS*HDPHAAPSLNSAVLSAAV 287
Query: 1015 LVPYPVLYMFP 1047
VPYPVLY P
Sbjct: 286 FVPYPVLYRLP 254
Score = 35.0 bits (70), Expect(3) = 1e-076
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1 / -1
Query: 1099 VAWALCHEP*STPAARWAREQKAEQS 1176
VAWALCH P* AA AR K E++
Sbjct: 202 VAWALCHPP*PPAAACRARRHKEEKT 125
Score = 33.1 bits (66), Expect(2) = 3e-096
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -1 / +1
Query: 608 MSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPA 489
MSR WG WQS +LL G + S R PA
Sbjct: 691 MSRTWGLTWQSTTLLGGPRPLLSGSTSADRANRDQATPPA 810
Score = 25.4 bits (49), Expect(3) = 1e-076
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1 / -3
Query: 553 LWPSRSELLCQFWPQLRDM 609
L P +LCQ PQ+RDM
Sbjct: 746 LGPPSKVVLCQVKPQVRDM 690
>gb|BI960235.1|BI960235 HVSMEn0023N12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023N12f, mRNA sequence
Length = 667
Score = 249 bits (539), Expect(3) = 2e-093
Identities = 101/131 (77%), Positives = 108/131 (82%)
Frame = -1 / +1
Query: 884 PPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTING 705
P DDGGWCNPPR HFDMA+PA+LQI YRAGIVPV+YRRVPCVKKGG+RFTING
Sbjct: 160 PAQLRAAEDDGGWCNPPRAHFDMAEPAYLQIGIYRAGIVPVSYRRVPCVKKGGMRFTING 339
Query: 704 HSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASD 525
HSYFNLVLVTNVAGAGDVQSVSIKGSS+GWQ M WG NWQSN+ LDGQSLSFQVT +
Sbjct: 340 HSYFNLVLVTNVAGAGDVQSVSIKGSSSGWQAMFPQWGHNWQSNADLDGQSLSFQVTLTY 519
Query: 524 GRTVTSNGVAP 492
R VT N AP
Sbjct: 520 RRDVTINNAAP 552
Score = 212 bits (457), Expect(3) = 4e-073
Identities = 92/123 (74%), Positives = 98/123 (79%)
Frame = +1 / -3
Query: 493 GATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLEPLMDTDCTSPAPAT 672
GA L+VT R + VT K+RL PSRS LLCQ WP +M CHP L+PLM+TDCTSPAPAT
Sbjct: 551 GAALLMVTSRR*VRVT*KERL*PSRSALLCQLWPHCGNMACHPELDPLMETDCTSPAPAT 372
Query: 673 LVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGWAMSKCGRGGLHQP 852
LVTSTRLK*EWPLMVNLIPPFFT GTL * TGTMPAR IWR AG AMSK RGGLHQP
Sbjct: 371 LVTSTRLK*EWPLMVNLIPPFFTQGTLR*ETGTMPAR*IPIWR*AGSAMSKWARGGLHQP 192
Query: 853 PSS 861
PSS
Sbjct: 191 PSS 183
Score = 82.2 bits (173), Expect(3) = 2e-093
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = -1 / +2
Query: 1046 GNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNN 936
GN+YSTG GTNTAALSTALFNDGAACGSCYEL+C +
Sbjct: 5 GNLYSTGCGTNTAALSTALFNDGAACGSCYELKCQGS 115
Score = 64.8 bits (135), Expect(3) = 4e-073
Identities = 28/32 (87%), Positives = 28/32 (87%)
Frame = +1 / -2
Query: 952 SS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP 1047
SS* DPHAAPSLNSAVLSAAV VP PVLY FP
Sbjct: 99 SS*HDPHAAPSLNSAVLSAAVFVPQPVLYRFP 4
Score = 51.5 bits (106), Expect(3) = 2e-093
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -1 / +2
Query: 935 GQSCLPGTITVTATNFCPPNYGL 867
G SC+PG+IT+TATN CPPNY L
Sbjct: 110 GSSCVPGSITITATNLCPPNYAL 178
Score = 38.2 bits (77), Expect(3) = 4e-073
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1 / -2
Query: 874 *LGGQKLVAVTVMVPGRHDCP 936
*LGGQ+LVAV VM+PG H+ P
Sbjct: 171 *LGGQRLVAVMVMLPGTHELP 109
>gb|BQ465629.1|BQ465629 HU04D11r HU Hordeum vulgare subsp. vulgare cDNA clone HU04D11
5-PRIME, mRNA sequence
Length = 625
Score = 330 bits (714), Expect(2) = 3e-093
Identities = 128/149 (85%), Positives = 136/149 (91%)
Frame = -1 / +2
Query: 896 TNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRF 717
T CPPNY LP+DDGGWCNPPR HFDMA+PA+LQI YRAGIVPV+YRRVPCVKKGG+RF
Sbjct: 5 TRLCPPNYALPNDDGGWCNPPRAHFDMAEPAYLQIGIYRAGIVPVSYRRVPCVKKGGMRF 184
Query: 716 TINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQSLSFQV 537
TINGHSYFNLVLVTNVAGAGDVQSVSIKGSS+GWQ MSRNWGQNWQSN+ LDGQSLSF+V
Sbjct: 185 TINGHSYFNLVLVTNVAGAGDVQSVSIKGSSSGWQAMSRNWGQNWQSNADLDGQSLSFRV 364
Query: 536 TASDGRTVTSNGVAPAGWQFGQTFEGAQF 450
T SDGRTVTSN APAGW FGQTFEG QF
Sbjct: 365 TLSDGRTVTSNNAAPAGWSFGQTFEGGQF 451
Score = 287 bits (621), Expect(2) = 3e-079
Identities = 122/149 (81%), Positives = 125/149 (83%)
Frame = +1 / -2
Query: 451 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLE 630
NW PSKV P QPAGA LLVTVRPSL VT K+RLWPSRS LLCQFWPQLRDM CHP L+
Sbjct: 450 NWPPSKVCPKDQPAGAALLLVTVRPSLRVTRKERLWPSRSALLCQFWPQLRDMACHPELD 271
Query: 631 PLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAG 810
PLM+TDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFT GTL * TGTMPAR IWR AG
Sbjct: 270 PLMETDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTQGTLR*ETGTMPAR*IPIWR*AG 91
Query: 811 WAMSKCGRGGLHQPPSSLGRP*LGGQKLV 897
AMSK RGGLHQPPSSLG *LGGQ LV
Sbjct: 90 SAMSKWARGGLHQPPSSLGSA*LGGQSLV 4
Score = 33.1 bits (66), Expect(2) = 3e-093
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -2 / +1
Query: 364 AIPRLLIISTRLGISFSY 311
AI RLL+ISTRLG+SFS+
Sbjct: 556 AILRLLLISTRLGLSFSH 609
Score = 29.0 bits (57), Expect(2) = 3e-079
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2 / -2
Query: 311 IREGNA*AGANNKQPRN 361
+REG A*AGA+ +QP+N
Sbjct: 609 MREGKA*AGADQQQPQN 559
>gb|BI958334.1|BI958334 HVSMEn0014H08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014H08f, mRNA sequence
Length = 634
Score = 230 bits (496), Expect(2) = 2e-089
Identities = 87/102 (85%), Positives = 96/102 (94%)
Frame = -1 / +3
Query: 935 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 756
G SC+PG+IT+TATN CPPNY LP+DDGGWCNPPR HFDMA+PA+LQI YRAGIVPV+Y
Sbjct: 327 GSSCVPGSITITATNLCPPNYALPNDDGGWCNPPRAHFDMAEPAYLQIGIYRAGIVPVSY 506
Query: 755 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKG 630
RRVPCVKKGG+RFTINGHSYFNLVLVTNVAGAGDVQSVSI+G
Sbjct: 507 RRVPCVKKGGMRFTINGHSYFNLVLVTNVAGAGDVQSVSIRG 632
Score = 194 bits (418), Expect(3) = 1e-067
Identities = 83/103 (80%), Positives = 88/103 (85%)
Frame = +1 / -1
Query: 628 EPLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKA 807
+PLM+TDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFT GTL * TGTMPAR IWR A
Sbjct: 634 DPLMETDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTQGTLR*ETGTMPAR*IPIWR*A 455
Query: 808 GWAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDCP 936
G AMSK RGGLHQPPSSLG *LGGQ+LVAV VM+PG H+ P
Sbjct: 454 GSAMSKWARGGLHQPPSSLGSA*LGGQRLVAVMVMLPGTHELP 326
Score = 120 bits (257), Expect(2) = 2e-089
Identities = 48/70 (68%), Positives = 52/70 (74%)
Frame = -1 / +3
Query: 1145 RAAGVDYGSWQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACG 966
R A DYGSWQ+AHATFY GYGN+YSTGYGTNTAALSTALFNDGAACG
Sbjct: 123 RRAAGDYGSWQTAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACG 302
Query: 965 SCYELRCDNN 936
SCYEL+C +
Sbjct: 303 SCYELKCQGS 332
Score = 63.8 bits (133), Expect(3) = 1e-067
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +1 / -1
Query: 952 SS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP* 1050
SS* DPHAAPSLNSAVLSAAV VP PVLY FP*
Sbjct: 316 SS*HDPHAAPSLNSAVLSAAVFVP*PVLYRFP* 218
Score = 38.6 bits (78), Expect(3) = 1e-067
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1 / -1
Query: 1099 VAWALCHEP*STPAARWAREQKAEQS 1176
VAWA+CHEP*S A R +++ AE+S
Sbjct: 169 VAWAVCHEP*SPAARRARKQKAAEKS 92
>gb|CA005047.1|CA005047 HU12E04u HU Hordeum vulgare subsp. vulgare cDNA clone HU12E04
3-PRIME, mRNA sequence
Length = 529
Score = 323 bits (700), Expect = 1e-087
Identities = 126/145 (86%), Positives = 134/145 (92%)
Frame = -1 / +3
Query: 884 PPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTING 705
PPNY LP+DDGGWCNPPR HFDMA+PA+LQI YRAGIVPV+YRRVPCVKKGG+RFTING
Sbjct: 3 PPNYALPNDDGGWCNPPRAHFDMAEPAYLQIGIYRAGIVPVSYRRVPCVKKGGMRFTING 182
Query: 704 HSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASD 525
HSYFNLVLVTNVAGAGDVQSVSIKGSS+GWQ MSRNWGQNWQSN+ LDGQSLSF+VT SD
Sbjct: 183 HSYFNLVLVTNVAGAGDVQSVSIKGSSSGWQAMSRNWGQNWQSNADLDGQSLSFRVTLSD 362
Query: 524 GRTVTSNGVAPAGWQFGQTFEGAQF 450
GRTVTSN APAGW FGQTFEG QF
Sbjct: 363 GRTVTSNNAAPAGWSFGQTFEGGQF 437
Score = 281 bits (608), Expect = 6e-075
Identities = 119/145 (82%), Positives = 122/145 (84%)
Frame = +1 / -1
Query: 451 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLE 630
NW PSKV P QPAGA LLVTVRPSL VT K+RLWPSRS LLCQFWPQLRDM CHP L+
Sbjct: 436 NWPPSKVCPKDQPAGAALLLVTVRPSLRVTRKERLWPSRSALLCQFWPQLRDMACHPELD 257
Query: 631 PLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAG 810
PLM+TDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFT GTL * TGTMPAR IWR AG
Sbjct: 256 PLMETDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTQGTLR*ETGTMPAR*IPIWR*AG 77
Query: 811 WAMSKCGRGGLHQPPSSLGRP*LGG 885
AMSK RGGLHQPPSSLG *LGG
Sbjct: 76 SAMSKWARGGLHQPPSSLGSA*LGG 2
>gb|BQ768669.1|BQ768669 EBro08_SQ012_H11_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_H11 5', mRNA sequence
Length = 590
Score = 218 bits (470), Expect(2) = 6e-086
Identities = 82/95 (86%), Positives = 89/95 (93%)
Frame = -1 / +2
Query: 935 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 756
G SC+PG+IT+TATN CPPNY LP+DDGGWCNPPR HFDMA+PA+LQI YRAGIVPV+Y
Sbjct: 305 GSSCVPGSITITATNLCPPNYALPNDDGGWCNPPRAHFDMAEPAYLQIGIYRAGIVPVSY 484
Query: 755 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDV 651
RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDV
Sbjct: 485 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDV 589
Score = 181 bits (389), Expect(3) = 5e-062
Identities = 78/95 (82%), Positives = 81/95 (85%)
Frame = +1 / -3
Query: 652 TSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGWAMSKCG 831
TSPAPATLVTSTRLK*EWPLMVNLIPPFFT GTL * TGTMPAR IWR AG AMSKC
Sbjct: 588 TSPAPATLVTSTRLK*EWPLMVNLIPPFFTQGTLR*ETGTMPAR*IPIWR*AGSAMSKCA 409
Query: 832 RGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDCP 936
RGGLHQPPSSLG *LGGQ+LVAV VM+PG H+ P
Sbjct: 408 RGGLHQPPSSLGSA*LGGQRLVAVMVMLPGTHELP 304
Score = 120 bits (257), Expect(2) = 6e-086
Identities = 48/70 (68%), Positives = 52/70 (74%)
Frame = -1 / +2
Query: 1145 RAAGVDYGSWQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACG 966
R A DYGSWQ+AHATFY GYGN+YSTGYGTNTAALSTALFNDGAACG
Sbjct: 101 RRAAGDYGSWQTAHATFYGGGEASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACG 280
Query: 965 SCYELRCDNN 936
SCYEL+C +
Sbjct: 281 SCYELKCQGS 310
Score = 63.8 bits (133), Expect(3) = 5e-062
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +1 / -3
Query: 952 SS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP* 1050
SS* DPHAAPSLNSAVLSAAV VP PVLY FP*
Sbjct: 294 SS*HDPHAAPSLNSAVLSAAVFVP*PVLYRFP* 196
Score = 32.7 bits (65), Expect(3) = 5e-062
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1 / -3
Query: 1099 VAWALCHEP*STPAARWAREQKAEQS 1176
VA A+CHEP*S A R +++ AE+S
Sbjct: 147 VACAVCHEP*SPAARRARKQKAAEKS 70
>gb|CA031352.1|CA031352 HX09L09r HX Hordeum vulgare subsp. vulgare cDNA clone HX09L09
5-PRIME, mRNA sequence
Length = 631
Score = 200 bits (432), Expect(3) = 5e-085
Identities = 77/101 (76%), Positives = 86/101 (85%)
Frame = -1 / +3
Query: 929 SCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRR 750
+CLPG+ VTATNFCPPN+G SD GGWCNPPR HFDM+QP F +IA YRAGIVPV+YRR
Sbjct: 108 ACLPGSTVVTATNFCPPNFGESSDAGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRR 287
Query: 749 VPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGS 627
V C KKGGIRFTINGHSYFNLVLVTNV G GDV +VS+K +
Sbjct: 288 VACQKKGGIRFTINGHSYFNLVLVTNVGGPGDVHAVSVKST 410
Score = 158 bits (339), Expect(2) = 6e-055
Identities = 69/97 (71%), Positives = 74/97 (76%)
Frame = +1 / -1
Query: 634 LMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGW 813
L DT CTSP P TLVTSTRLK EWPL+VNL+PPFF H TL * TGTMPAR A+ K GW
Sbjct: 403 LTDTACTSPGPPTLVTSTRLKYEWPLIVNLMPPFFWHATLR*ETGTMPAR*SAMRWKTGW 224
Query: 814 AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGR 924
MSK RGGLHQPP+S P LGGQKLVAVT + PGR
Sbjct: 223 DMSKWARGGLHQPPASDDSPKLGGQKLVAVTTVEPGR 113
Score = 112 bits (239), Expect(3) = 5e-085
Identities = 41/59 (69%), Positives = 47/59 (79%)
Frame = -1 / +3
Query: 626 STGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 450
S WQ +SRNWGQNWQSN+LLDGQ LSF+VTA +G++V SN P GW FGQTF GAQF
Sbjct: 414 SAAWQALSRNWGQNWQSNALLDGQGLSFRVTAGNGQSVVSNNAVPRGWSFGQTFSGAQF 590
Score = 77.1 bits (162), Expect(2) = 6e-055
Identities = 33/56 (58%), Positives = 35/56 (62%)
Frame = +1 / -1
Query: 451 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCH 618
NWAP KVWPN QP G L T P AVT +R PS S LLCQF PQLR+ CH
Sbjct: 589 NWAPLKVWPNDQPRGTALLETTDWPLPAVTRNERPCPSSSALLCQFCPQLRESACH 422
Score = 41.8 bits (85), Expect(3) = 5e-085
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -1 / +3
Query: 995 ALFNDGAACGSCYELRCDNNG 933
ALFN+G +CG+C+E+RCD G
Sbjct: 24 ALFNNGLSCGACFEVRCDPGG 86
>gb|BF253497.3|BF253497 HVSMEf0001B16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001B16f, mRNA sequence
Length = 574
Score = 259 bits (560), Expect(2) = 1e-084
Identities = 104/161 (64%), Positives = 121/161 (75%)
Frame = -1 / +1
Query: 935 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 756
G SC+PG+IT+TATN CPPNY LP+DDGGWCNPPR HFDMA+PA+LQI YRAGIVPV+Y
Sbjct: 91 GSSCVPGSITITATNLCPPNYALPNDDGGWCNPPRAHFDMAEPAYLQIGIYRAGIVPVSY 270
Query: 755 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQS 576
RRVPCVKKGG+RFTINGHSYFNLVLVTNVAGAGDVQSVSIKG + G P+ + + +
Sbjct: 271 RRVPCVKKGGMRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGPAPGGGPVPQLGPELAKQ 450
Query: 575 NSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQ 453
+ SF + TS AP+ W FGQTF+G Q
Sbjct: 451 RRTSTARGCSFGSPLAKAEPSTSTTSAPSRWSFGQTFQGRQ 573
Score = 192 bits (414), Expect(3) = 1e-061
Identities = 84/109 (77%), Positives = 88/109 (80%)
Frame = +1 / -3
Query: 610 GCHPVLEPLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYC 789
G P P M+TDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFT GTL * TGTMPAR
Sbjct: 416 GPPPGAGPFMETDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTQGTLR*ETGTMPAR*I 237
Query: 790 AIWRKAGWAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDCP 936
IWR AG AMSK RGGLHQPPSSLG *LGGQ+LVAV VM+PG H+ P
Sbjct: 236 PIWR*AGSAMSKWARGGLHQPPSSLGSA*LGGQRLVAVMVMLPGTHELP 90
Score = 74.8 bits (157), Expect(2) = 1e-084
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = -1 / +1
Query: 1031 TGYGTNTAALSTALFNDGAACGSCYELRCDNN 936
TGYGTNTAALSTALFNDGAACGSCYEL+C +
Sbjct: 1 TGYGTNTAALSTALFNDGAACGSCYELKCQGS 96
Score = 67.0 bits (140), Expect(3) = 2e-021
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = +3 / -2
Query: 711 DGEPDPALLHARHPPVGDGHDAGAVLRDLEEGRLGH 818
DGEP PALLH HPPVG+GHDAGAV DLE G L H
Sbjct: 315 DGEPHPALLHTGHPPVGNGHDAGAVDTDLEVGGLCH 208
Score = 51.0 bits (105), Expect(3) = 1e-061
Identities = 23/26 (88%), Positives = 23/26 (88%)
Frame = +1 / -3
Query: 952 SS*QDPHAAPSLNSAVLSAAVLVPYP 1029
SS* DPHAAPSLNSAVLSAAV VP P
Sbjct: 80 SS*HDPHAAPSLNSAVLSAAVFVP*P 3
Score = 47.3 bits (97), Expect(3) = 2e-021
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1 / -1
Query: 514 TVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLEPL 636
TVRPSL VT K+ LWPS+S + + G HP L+PL
Sbjct: 511 TVRPSLRVTRKNSLWPSKSAVALPVLAPVAGQGLHPELDPL 389
Score = 33.1 bits (66), Expect(3) = 1e-061
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1 / -2
Query: 574 LLCQFWPQLRD 606
LLCQFWPQLRD
Sbjct: 450 LLCQFWPQLRD 418
Score = 26.3 bits (51), Expect(3) = 2e-021
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / -1
Query: 815 PCRSAGAAGCT 847
PCRS AAGCT
Sbjct: 211 PCRSGRAAGCT 179
>gb|CA023510.1|CA023510 HZ46H12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46H12
5-PRIME, mRNA sequence
Length = 429
Score = 276 bits (598), Expect(2) = 2e-079
Identities = 104/121 (85%), Positives = 113/121 (93%)
Frame = -1 / +3
Query: 935 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 756
G SC+PG+IT+TATN CPPNY LP+DDGGWCNPPR HFDMA+PA+LQI YRAGIVPV+Y
Sbjct: 66 GSSCVPGSITITATNLCPPNYALPNDDGGWCNPPRAHFDMAEPAYLQIGIYRAGIVPVSY 245
Query: 755 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQS 576
RRVPCVKKGG+RFTINGHSYFNLVL TNVAGAGDVQSVSIKGSS+GWQ MSRNWGQNWQS
Sbjct: 246 RRVPCVKKGGMRFTINGHSYFNLVLXTNVAGAGDVQSVSIKGSSSGWQAMSRNWGQNWQS 425
Query: 575 N 573
N
Sbjct: 426 N 428
Score = 234 bits (505), Expect(2) = 7e-063
Identities = 97/121 (80%), Positives = 102/121 (84%)
Frame = +1 / -3
Query: 574 LLCQFWPQLRDMGCHPVLEPLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTL 753
LLCQFWPQLRDM CHP L+PLM+TDCTSPAPATLV STRLK*EWPLMVNL PPFFT GTL
Sbjct: 427 LLCQFWPQLRDMACHPELDPLMETDCTSPAPATLVXSTRLK*EWPLMVNLXPPFFTQGTL 248
Query: 754 L*ATGTMPARYCAIWRKAGWAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDC 933
* TGTMPAR IWR AG AMSK RGGLHQPPSSLG *LGGQ+LVAV VM+PG H+
Sbjct: 247 R*ETGTMPAR*IPIWR*AGSAMSKWARGGLHQPPSSLGSA*LGGQRLVAVMVMLPGTHEL 68
Query: 934 P 936
P
Sbjct: 67 P 65
Score = 40.5 bits (82), Expect(2) = 2e-079
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1 / +3
Query: 986 NDGAACGSCYELRCDNN 936
NDGAACGSCYEL+C +
Sbjct: 21 NDGAACGSCYELKCQGS 71
Score = 27.6 bits (54), Expect(2) = 7e-063
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / -3
Query: 952 SS*QDPHAAPSLNS 993
SS* DPHAAPSL +
Sbjct: 55 SS*HDPHAAPSLTA 14
>gb|CA024803.1|CA024803 HZ50F17r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50F17
5-PRIME, mRNA sequence
Length = 519
Score = 200 bits (432), Expect(3) = 1e-076
Identities = 77/101 (76%), Positives = 86/101 (85%)
Frame = -1 / +2
Query: 929 SCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRR 750
+CLPG+ VTATNFCPPN+G SD GGWCNPPR HFDM+QP F +IA YRAGIVPV+YRR
Sbjct: 104 ACLPGSTVVTATNFCPPNFGESSDAGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRR 283
Query: 749 VPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGS 627
V C KKGGIRFTINGHSYFNLVLVTNV G GDV +VS+K +
Sbjct: 284 VACQKKGGIRFTINGHSYFNLVLVTNVGGPGDVHAVSVKST 406
Score = 158 bits (339), Expect(3) = 4e-048
Identities = 69/97 (71%), Positives = 74/97 (76%)
Frame = +1 / -1
Query: 634 LMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGW 813
L DT CTSP P TLVTSTRLK EWPL+VNL+PPFF H TL * TGTMPAR A+ K GW
Sbjct: 399 LTDTACTSPGPPTLVTSTRLKYEWPLIVNLMPPFFWHATLR*ETGTMPAR*SAMRWKTGW 220
Query: 814 AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGR 924
MSK RGGLHQPP+S P LGGQKLVAVT + PGR
Sbjct: 219 DMSKWARGGLHQPPASDDSPKLGGQKLVAVTTVEPGR 109
Score = 72.5 bits (152), Expect(3) = 1e-076
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = -1 / +2
Query: 626 STGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGR 519
S WQ +SRNWGQNWQSN+LLDGQ LSF+VTA +G+
Sbjct: 410 SAAWQALSRNWGQNWQSNALLDGQGLSFRVTAGNGQ 517
Score = 53.8 bits (111), Expect(3) = 1e-076
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = -1 / +2
Query: 1013 TAALSTALFNDGAACGSCYELRCDNNG 933
TAALSTALFN+G +CG+C+E+RCD G
Sbjct: 2 TAALSTALFNNGLSCGACFEVRCDPGG 82
Score = 45.1 bits (92), Expect(3) = 4e-048
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +1 / -1
Query: 523 PSLAVTWKDRLWPSRSELLCQFWPQLRDMGCH 618
P AVT +R PS S LLCQF PQLR+ CH
Sbjct: 513 PLPAVTRNERPCPSSSALLCQFCPQLRESACH 418
Score = 27.6 bits (54), Expect(3) = 4e-048
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +1 / -1
Query: 943 SQRSS*QDPHAAPSLNSAVLSAAV 1014
S R+S Q P P L SAVL AAV
Sbjct: 72 SHRTSKQAPQLRPLLKSAVLRAAV 1
>gb|BE215000.1|BE215000 HV_CEb0005H19f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0005H19f, mRNA sequence
Length = 904
Score = 180 bits (387), Expect(3) = 1e-075
Identities = 64/80 (80%), Positives = 73/80 (91%)
Frame = -1 / +2
Query: 935 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 756
G SC+PG+IT+T TN CPPNY LP+DDGGWCNPPR HFDMA+PA+LQI YRAGIVPV+Y
Sbjct: 353 GSSCVPGSITITGTNLCPPNYALPNDDGGWCNPPRAHFDMAEPAYLQIGIYRAGIVPVSY 532
Query: 755 RRVPCVKKGGIRFTINGHSY 696
R+VPCVKKGG+RFTINGHSY
Sbjct: 533 RKVPCVKKGGMRFTINGHSY 592
Score = 136 bits (291), Expect(3) = 2e-050
Identities = 60/83 (72%), Positives = 65/83 (78%)
Frame = +1 / -2
Query: 688 RLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGWAMSKCGRGGLHQPPSSLG 867
++K*E PLMVNLIPPFFT GT * TGTMPAR IWR AG AMSK RGGLHQPPSSLG
Sbjct: 600 QVK*ECPLMVNLIPPFFTQGTFR*ETGTMPAR*IPIWR*AGSAMSKWARGGLHQPPSSLG 421
Query: 868 RP*LGGQKLVAVTVMVPGRHDCP 936
*LGGQ+LV V VM+PG H+ P
Sbjct: 420 SA*LGGQRLVPVMVMLPGTHELP 352
Score = 120 bits (257), Expect(3) = 1e-075
Identities = 48/70 (68%), Positives = 52/70 (74%)
Frame = -1 / +2
Query: 1145 RAAGVDYGSWQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACG 966
R A DYGSWQ+AHATFY GYGN+YSTGYGTNTAALSTALFNDGAACG
Sbjct: 149 RRAAGDYGSWQTAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACG 328
Query: 965 SCYELRCDNN 936
SCYEL+C +
Sbjct: 329 SCYELKCQGS 358
Score = 63.8 bits (133), Expect(3) = 2e-050
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +1 / -2
Query: 952 SS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP* 1050
SS* DPHAAPSLNSAVLSAAV VP PVLY FP*
Sbjct: 342 SS*HDPHAAPSLNSAVLSAAVFVP*PVLYRFP* 244
Score = 38.6 bits (78), Expect(3) = 2e-050
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1 / -2
Query: 1099 VAWALCHEP*STPAARWAREQKAEQS 1176
VAWA+CHEP*S A R +++ AE+S
Sbjct: 195 VAWAVCHEP*SPAARRARKQKAAEKS 118
Score = 22.6 bits (43), Expect(3) = 1e-075
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1 / +2
Query: 662 AGDVQSVSIKGSSTG 618
AGDV S +KGS++G
Sbjct: 623 AGDVXSGFLKGSASG 667
>gb|BQ760682.1|BQ760682 EBro03_SQ003_C23_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ003_C23 5', mRNA sequence
Length = 594
Score = 189 bits (407), Expect(3) = 3e-075
Identities = 69/98 (70%), Positives = 84/98 (85%)
Frame = -1 / +1
Query: 914 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 735
T+TVTATNFCPPN LP+D+GGWCNPPRPHFDMAQPA+ +I YR GI+PV Y+RVPCVK
Sbjct: 187 TVTVTATNFCPPNNALPNDNGGWCNPPRPHFDMAQPAWEKIGVYRGGIIPVMYQRVPCVK 366
Query: 734 KGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSST 621
+GG+RF +NGH YFNLVLV+NVA AG +QS+ +K S +
Sbjct: 367 RGGVRFKMNGHDYFNLVLVSNVAAAGSIQSMDVKCSDS 480
Score = 132 bits (282), Expect(3) = 8e-040
Identities = 62/96 (64%), Positives = 67/96 (69%)
Frame = +1 / -2
Query: 628 EPLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKA 807
E L D PA ATL+TSTRLK* P ++NL PP FTHGTL TG MP I+ +A
Sbjct: 473 EHLTSMDWIEPAAATLLTSTRLK*S*PFILNLTPPRFTHGTLWYMTGMMPPL*TPIFSQA 294
Query: 808 GWAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMV 915
G AMSKCGRGGLHQPP SLGR LGGQK VAVTV V
Sbjct: 293 GCAMSKCGRGGLHQPPLSLGRALLGGQKFVAVTVTV 186
Score = 76.7 bits (161), Expect(3) = 3e-075
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -1 / +1
Query: 1049 YGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCD 942
YGN++S GYGT TAALST LFNDGAACG CY++ CD
Sbjct: 40 YGNLFSEGYGTRTAALSTVLFNDGAACGQCYKIACD 147
Score = 56.1 bits (116), Expect(3) = 3e-075
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = -1 / +1
Query: 626 STGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTV 513
S W PM+RNWG NW S + L G+ L+F++T SDG T+
Sbjct: 478 SEDWMPMARNWGANWHSLANLTGKMLAFRLTNSDGHTL 591
Score = 40.5 bits (82), Expect(3) = 8e-040
Identities = 22/45 (48%), Positives = 24/45 (53%)
Frame = +1 / -2
Query: 895 VAVTVMVPGRHDCPLLSQRSS*QDPHAAPSLNSAVLSAAVLVPYP 1029
V VT + L S * P AAPSLN+ VL AAV VPYP
Sbjct: 194 VTVTPGLQNNGSARLRSHAIL*HCPQAAPSLNNTVLRAAVRVPYP 60
Score = 30.4 bits (60), Expect(3) = 8e-040
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1 / -2
Query: 514 TVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMG 612
+V PSL V+ K + P R CQ PQLR +G
Sbjct: 590 SVCPSLLVSLKASILPVRLASECQLAPQLRAIG 492
>gb|BG368613.1|BG368613 HVSMEi0019P07f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0019P07f, mRNA sequence
Length = 619
Score = 280 bits (606), Expect = 1e-074
Identities = 111/132 (84%), Positives = 118/132 (89%)
Frame = -1 / +1
Query: 845 CNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVA 666
CNPPRPHFDMA+PAFL I QYRAGIVPV+YRRVPCVKKGGIRFTINGHSYFNLVLVTNVA
Sbjct: 1 CNPPRPHFDMAEPAFLHIGQYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVA 180
Query: 665 GAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAG 486
GAGD +SVSIKG+ TGWQ MSRNWG NWQS + LDGQ LSF+VT+SDGRTVTSN PAG
Sbjct: 181 GAGDARSVSIKGTRTGWQAMSRNWGMNWQSITFLDGQCLSFRVTSSDGRTVTSNAAGPAG 360
Query: 485 WQFGQTFEGAQF 450
WQF QTF GAQF
Sbjct: 361 WQFRQTF*GAQF 396
Score = 253 bits (548), Expect = 1e-066
Identities = 104/131 (79%), Positives = 109/131 (83%)
Frame = +1 / -3
Query: 451 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLE 630
NWAP KVW NCQPAG LLVTVRPSL VT K+R WPSR +LCQF PQLRDM C PV
Sbjct: 395 NWAP*KVWRNCQPAGPAALLVTVRPSLEVTLKERHWPSRKVMLCQFMPQLRDMACQPVRV 216
Query: 631 PLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAG 810
PLMDT+ SPAPATLVTSTRLK*EWPLMVN +PPFFTHGTLL* TGTMPARYC +WRKAG
Sbjct: 215 PLMDTERASPAPATLVTSTRLK*EWPLMVNRMPPFFTHGTLL*ETGTMPARYCPMWRKAG 36
Query: 811 WAMSKCGRGGL 843
AMSK GRGGL
Sbjct: 35 SAMSKWGRGGL 3
Score = 75.3 bits (158), Expect(4) = 3e-023
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +3 / -2
Query: 711 DGEPDPALLHARHPPVGDGHDAGAVLRDLEEGRLGH 818
DGEPD LLHARHP VG+G+DAGAVL D+EEGRLGH
Sbjct: 135 DGEPDAPLLHARHPSVGNGYDAGAVLPDVEEGRLGH 28
Score = 54.7 bits (113), Expect(4) = 1e-022
Identities = 25/44 (56%), Positives = 26/44 (59%)
Frame = -3 / +3
Query: 819 HGPAGLXXXXXXXXXXXXXRLQEGAVREEGRDQVHHQRPLLLQP 688
HG AGL LQ+GAVREEG VHHQRPLLLQP
Sbjct: 27 HGRAGLPPHRAVPRRHRTRFLQKGAVREEGGHPVHHQRPLLLQP 158
Score = 46.9 bits (96), Expect(4) = 1e-022
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -3 / +3
Query: 624 HRVAAHVPQLGPELAEQLAPRRPEPVLPG 538
HR+A HVPQLG ELAE P RP P+L G
Sbjct: 222 HRLAGHVPQLGHELAEHHLPGRPVPLLQG 308
Score = 33.6 bits (67), Expect(4) = 1e-022
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / +2
Query: 649 SPCPSRAPAPGGSPC 605
+PCPSRA AP G PC
Sbjct: 197 APCPSRARAPAGRPC 241
Score = 31.8 bits (63), Expect(4) = 3e-023
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2 / -1
Query: 806 PAGPCRSAGAAGC 844
PA PCRS GAAGC
Sbjct: 40 PARPCRSGGAAGC 2
Score = 30.9 bits (61), Expect(4) = 3e-023
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2 / -1
Query: 449 RTGRPRRSGRTAS 487
RTGRPRRSG TAS
Sbjct: 397 RTGRPRRSGETAS 359
Score = 26.7 bits (52), Expect(4) = 1e-022
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3 / +3
Query: 486 LAVRPDLRGRPVL 448
LAV PDL GRPVL
Sbjct: 360 LAVSPDLLGRPVL 398
Score = 25.8 bits (50), Expect(4) = 3e-023
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3 / -2
Query: 543 EGQALAVEERVALPV 587
EG+ALAV+E ALPV
Sbjct: 303 EGEALAVQEGDALPV 259
>gb|BQ766646.1|BQ766646 EBro08_SQ006_P15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ006_P15 5', mRNA sequence
Length = 454
Score = 275 bits (595), Expect = 4e-073
Identities = 105/151 (69%), Positives = 121/151 (80%)
Frame = -1 / +1
Query: 917 GTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCV 738
G+ VTATN CP NY ++DGGWCNPP+ HFD+A+P F +IAQ RAG+VPV YRRV CV
Sbjct: 1 GSAMVTATNLCPANYARANNDGGWCNPPQSHFDLAEPVFTRIAQARAGVVPVQYRRVACV 180
Query: 737 KKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDG 558
K GGIRFTI GHSYFNLVL+TNVAGAGD+ SV +K STGW MS NWG NWQ+ ++L+G
Sbjct: 181 KTGGIRFTITGHSYFNLVLITNVAGAGDLMSVYVKAPSTGWLTMSHNWGANWQNGAMLNG 360
Query: 557 QSLSFQVTASDGRTVTSNGVAPAGWQFGQTF 465
Q LSF+VT SDGRT TSN VAP GW FGQTF
Sbjct: 361 QPLSFRVTTSDGRTTTSNNVAPYGWTFGQTF 453
Score = 191 bits (412), Expect = 6e-048
Identities = 92/148 (62%), Positives = 96/148 (64%)
Frame = +1 / -3
Query: 466 KVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLEPLMDT 645
KVWP QP GAT L V VRPSL VT KD WP CQ PQL M HPVL T
Sbjct: 452 KVWPKVQP*GATLLDVVVRPSLVVTRKDSGWPLSMAPFCQLAPQLWLMVSHPVLGAFTYT 273
Query: 646 DCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGWAMSK 825
D SPAPATLV STRLK*EWP+MVN +PP TH TLL TGT PAR AI G A SK
Sbjct: 272 DIRSPAPATLVMSTRLK*EWPVMVNRMPPVLTHATLLYWTGTTPARAWAILVNTGSARSK 93
Query: 826 CGRGGLHQPPSSLGRP*LGGQKLVAVTV 909
C GGLH PPS L R *L GQ+LVAVT+
Sbjct: 92 CDCGGLHHPPSLLARA*LAGQRLVAVTM 9
>gb|BI957345.1|BI957345 HVSMEn0009B08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0009B08f, mRNA sequence
Length = 651
Score = 200 bits (432), Expect(3) = 4e-072
Identities = 77/101 (76%), Positives = 86/101 (85%)
Frame = -1 / +3
Query: 929 SCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRR 750
+CLPG+ VTATNFCPPN+G SD GGWCNPPR HFDM+QP F +IA YRAGIVPV+YRR
Sbjct: 87 ACLPGSTVVTATNFCPPNFGESSDAGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRR 266
Query: 749 VPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGS 627
V C KKGGIRFTINGHSYFNLVLVTNV G GDV +VS+K +
Sbjct: 267 VACQKKGGIRFTINGHSYFNLVLVTNVGGPGDVHAVSVKST 389
Score = 158 bits (339), Expect(2) = 4e-045
Identities = 69/97 (71%), Positives = 74/97 (76%)
Frame = +1 / -3
Query: 634 LMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGW 813
L DT CTSP P TLVTSTRLK EWPL+VNL+PPFF H TL * TGTMPAR A+ K GW
Sbjct: 382 LTDTACTSPGPPTLVTSTRLKYEWPLIVNLMPPFFWHATLR*ETGTMPAR*SAMRWKTGW 203
Query: 814 AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGR 924
MSK RGGLHQPP+S P LGGQKLVAVT + PGR
Sbjct: 202 DMSKWARGGLHQPPASDDSPKLGGQKLVAVTTVEPGR 92
Score = 68.9 bits (144), Expect(3) = 4e-072
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = -1 / +3
Query: 626 STGWQPMSRNWGQNWQSNSLLDGQSLSFQVTA 531
S WQ +SRNWGQNWQSN+LLDGQ LSF+VTA
Sbjct: 393 SAAWQALSRNWGQNWQSNALLDGQGLSFRVTA 488
Score = 44.1 bits (90), Expect(2) = 4e-045
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +1 / -3
Query: 532 AVTWKDRLWPSRSELLCQFWPQLRDMGCH 618
AVT +R PS S LLCQF PQLR+ CH
Sbjct: 487 AVTRNERPCPSSSALLCQFCPQLRESACH 401
Score = 41.8 bits (85), Expect(3) = 4e-072
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -1 / +3
Query: 995 ALFNDGAACGSCYELRCDNNG 933
ALFN+G +CG+C+E+RCD G
Sbjct: 3 ALFNNGLSCGACFEVRCDPGG 65
>gb|BI957392.1|BI957392 HVSMEn0009F06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0009F06f, mRNA sequence
Length = 665
Score = 180 bits (387), Expect(2) = 2e-071
Identities = 64/81 (79%), Positives = 74/81 (91%)
Frame = -1 / +2
Query: 935 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 756
G SC+PG+IT+TATN CPPNY LP+DDGGWCNPPR HF MA+PA+LQI YRAGIVPV+Y
Sbjct: 191 GSSCVPGSITITATNLCPPNYALPNDDGGWCNPPRAHFXMAEPAYLQIGIYRAGIVPVSY 370
Query: 755 RRVPCVKKGGIRFTINGHSYF 693
RRVPCVKKGG+RFT+NGH+YF
Sbjct: 371 RRVPCVKKGGMRFTMNGHAYF 433
Score = 141 bits (302), Expect(3) = 7e-047
Identities = 61/83 (73%), Positives = 65/83 (78%)
Frame = +1 / -3
Query: 688 RLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGWAMSKCGRGGLHQPPSSLG 867
RLK* WP +VNLIPPFFT GTL * TGTMPAR IWR AG AM K RGGLHQPPSSLG
Sbjct: 438 RLK*AWPFIVNLIPPFFTQGTLR*ETGTMPAR*IPIWR*AGSAMXKWARGGLHQPPSSLG 259
Query: 868 RP*LGGQKLVAVTVMVPGRHDCP 936
*LGGQ+LVAV VM+PG H+ P
Sbjct: 258 SA*LGGQRLVAVMVMLPGTHELP 190
Score = 110 bits (235), Expect(2) = 2e-071
Identities = 43/65 (66%), Positives = 47/65 (72%)
Frame = -1 / +2
Query: 1130 DYGSWQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACGSCYEL 951
DYG WQ+AHATFY GYGN+YSTGYGTNTAALSTALFNDGAACG CY L
Sbjct: 2 DYGGWQTAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACGWCYXL 181
Query: 950 RCDNN 936
+C +
Sbjct: 182 KCQGS 196
Score = 58.8 bits (122), Expect(3) = 7e-047
Identities = 27/33 (81%), Positives = 27/33 (81%)
Frame = +1 / -3
Query: 952 SS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP* 1050
S * PHAAPSLNSAVLSAAV VP PVLY FP*
Sbjct: 180 SX*HHPHAAPSLNSAVLSAAVFVP*PVLYRFP* 82
Score = 26.7 bits (52), Expect(3) = 7e-047
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 1099 VAWALCHEP*S 1131
VAWA+CH P*S
Sbjct: 33 VAWAVCHPP*S 1
>gb|AL503556.1|AL503556 AL503556 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02J12T 5', mRNA sequence
Length = 700
Score = 120 bits (257), Expect(4) = 3e-071
Identities = 48/70 (68%), Positives = 52/70 (74%)
Frame = -1 / +1
Query: 1145 RAAGVDYGSWQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACG 966
R A DYGSWQ+AHATFY GYGN+YSTGYGTNTAALSTALFNDGAACG
Sbjct: 25 RRAAGDYGSWQTAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACG 204
Query: 965 SCYELRCDNN 936
SCYEL+C +
Sbjct: 205 SCYELKCQGS 234
Score = 119 bits (255), Expect(4) = 3e-071
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = -1 / +3
Query: 782 RAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGS 627
RAGIVPV+YRRVPCVKKGG+RFTINGHSYFNLVLVTNVAGAGDVQSV IKGS
Sbjct: 384 RAGIVPVSYRRVPCVKKGGMRFTINGHSYFNLVLVTNVAGAGDVQSVXIKGS 539
Score = 115 bits (245), Expect(6) = 4e-056
Identities = 48/53 (90%), Positives = 49/53 (92%)
Frame = +1 / -1
Query: 625 LEPLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPAR 783
L+PLM TDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFT GTL * TGTMPAR
Sbjct: 541 LDPLMXTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTQGTLR*ETGTMPAR 383
Score = 63.8 bits (133), Expect(6) = 4e-056
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +1 / -3
Query: 952 SS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP* 1050
SS* DPHAAPSLNSAVLSAAV VP PVLY FP*
Sbjct: 218 SS*HDPHAAPSLNSAVLSAAVFVP*PVLYRFP* 120
Score = 60.6 bits (126), Expect(4) = 3e-071
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = -1 / +1
Query: 935 GQSCLPGTITVTATNFCPPNYGLPSDD 855
G SC+PG+IT+TATN CPPNY LP+DD
Sbjct: 229 GSSCVPGSITITATNLCPPNYALPNDD 309
Score = 45.5 bits (93), Expect(6) = 4e-056
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +1 / -3
Query: 856 SSLGRP*LGGQKLVAVTVMVPGRHDCP 936
SSLG *LGGQ+LVAV VM+PG H+ P
Sbjct: 308 SSLGSA*LGGQRLVAVMVMLPGTHELP 228
Score = 34.1 bits (68), Expect(6) = 4e-056
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1 / -3
Query: 1099 VAWALCHEP*STPAARWAREQKA 1167
VAWA+CHEP*S A R +++ A
Sbjct: 71 VAWAVCHEP*SPAARRARKQKXA 3
Score = 26.3 bits (51), Expect(4) = 3e-071
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / +3
Query: 614 QPMSRNWGQNWQSN 573
+P S GQNWQSN
Sbjct: 555 RPCSATGGQNWQSN 596
Score = 26.3 bits (51), Expect(6) = 4e-056
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / -3
Query: 815 PCRSAGAAGCT 847
PCRS AAGCT
Sbjct: 350 PCRSGRAAGCT 318
Score = 26.3 bits (51), Expect(6) = 4e-056
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1 / -1
Query: 574 LLCQFWPQLRDMG 612
LLCQFWP + + G
Sbjct: 595 LLCQFWPPVAEHG 557
>gb|AV917412.1|AV917412 AV917412 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18m24 5', mRNA sequence
Length = 626
Score = 268 bits (579), Expect = 6e-071
Identities = 107/123 (86%), Positives = 114/123 (92%)
Frame = -1 / +2
Query: 818 MAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVS 639
MA+PAFL IAQYRAGIVPV+YRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGD +SVS
Sbjct: 2 MAEPAFLHIAQYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVS 181
Query: 638 IKGSSTGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEG 459
IKG+ TGWQ MSRNWG NWQSN+ LDGQ LSF+VT+SDGRTVTSN APAGWQFGQTFEG
Sbjct: 182 IKGTRTGWQAMSRNWGMNWQSNTFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEG 361
Query: 458 AQF 450
AQF
Sbjct: 362 AQF 370
Score = 251 bits (543), Expect = 5e-066
Identities = 102/123 (82%), Positives = 106/123 (86%)
Frame = +1 / -3
Query: 451 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLE 630
NWAPSKVWPNCQPAGA LLVTVRPSL VT K+R WPSR LLCQF PQLRDM C PV
Sbjct: 369 NWAPSKVWPNCQPAGAAALLVTVRPSLEVTLKERHWPSRKVLLCQFMPQLRDMACQPVRV 190
Query: 631 PLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAG 810
PLMDT+ SPAPATLVTSTRLK*EWPLMVN +PPFFTHGTLL* TGTMPARYCA+WRKAG
Sbjct: 189 PLMDTERASPAPATLVTSTRLK*EWPLMVNRMPPFFTHGTLL*ETGTMPARYCAMWRKAG 10
Query: 811 WAM 819
AM
Sbjct: 9 SAM 1
Score = 80.8 bits (170), Expect(4) = 3e-022
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +3 / -2
Query: 711 DGEPDPALLHARHPPVGDGHDAGAVLRDLEEGRLGH 818
DGEPD LLHARHP VGDG+DAGAVLRD+EEGRLGH
Sbjct: 109 DGEPDAPLLHARHPSVGDGYDAGAVLRDVEEGRLGH 2
Score = 54.7 bits (113), Expect(4) = 4e-025
Identities = 25/44 (56%), Positives = 26/44 (59%)
Frame = -3 / +1
Query: 819 HGPAGLXXXXXXXXXXXXXRLQEGAVREEGRDQVHHQRPLLLQP 688
HG AGL LQ+GAVREEG VHHQRPLLLQP
Sbjct: 1 HGRAGLPPHRAVPRRHRTRLLQKGAVREEGGHPVHHQRPLLLQP 132
Score = 49.2 bits (101), Expect(4) = 4e-025
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = -3 / +1
Query: 624 HRVAAHVPQLGPELAEQLAPRRPEPVLPG 538
HR+A HVPQLG ELAEQ P RP P+L G
Sbjct: 196 HRLAGHVPQLGHELAEQHLPGRPVPLLQG 282
Score = 33.6 bits (67), Expect(4) = 4e-025
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 649 SPCPSRAPAPGGSPC 605
+PCPSRA AP G PC
Sbjct: 171 APCPSRARAPAGRPC 215
Score = 33.1 bits (66), Expect(4) = 3e-022
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2 / -1
Query: 449 RTGRPRRSGRTAS 487
RTGRPRRSGRTAS
Sbjct: 371 RTGRPRRSGRTAS 333
Score = 32.7 bits (65), Expect(4) = 4e-025
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3 / +1
Query: 486 LAVRPDLRGRPVL 448
LAVRPDLRGRPVL
Sbjct: 334 LAVRPDLRGRPVL 372
Score = 29.0 bits (57), Expect(4) = 3e-022
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3 / -2
Query: 543 EGQALAVEERVALPV 587
EG+ALAV+E VALPV
Sbjct: 277 EGEALAVQEGVALPV 233
Score = 22.6 bits (43), Expect(4) = 3e-022
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1 / -2
Query: 295 QSYGNNKRRKCLSGC***AASEWREPLLYYSEE 393
+ + + K LSGC* A++ LL+Y+EE
Sbjct: 619 RDFDETREGKRLSGC*SAASA*PGASLLHYNEE 521
>gb|BF065271.3|BF065271 HV_CEb0024O07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024O07f, mRNA sequence
Length = 823
Score = 111 bits (236), Expect(4) = 2e-070
Identities = 44/70 (62%), Positives = 48/70 (68%)
Frame = -1 / +3
Query: 1145 RAAGVDYGSWQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACG 966
R A DY SWQ+AHATFY Y N+YSTGYGTNTAALSTALFND AACG
Sbjct: 153 RRAAGDYSSWQTAHATFYGGGDASGTMGGACCYRNLYSTGYGTNTAALSTALFNDSAACG 332
Query: 965 SCYELRCDNN 936
SCYEL+C +
Sbjct: 333 SCYELKCQGS 362
Score = 88.6 bits (187), Expect(4) = 2e-070
Identities = 32/43 (74%), Positives = 35/43 (81%)
Frame = -1 / +1
Query: 890 FCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPV 762
F P Y LP+D GGWCNPPR HFDMA+PA+LQI YRAGIVPV
Sbjct: 403 FARPTYALPNDHGGWCNPPRAHFDMAEPAYLQIGIYRAGIVPV 531
Score = 79.9 bits (168), Expect(4) = 2e-070
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = -1 / +2
Query: 767 PVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSST 621
P +YRR PCVKKGG+RFTINGHSYFNL L TNVAGAG++ +G T
Sbjct: 527 PFSYRRGPCVKKGGMRFTINGHSYFNLGLETNVAGAGNMPVPFPQGGPT 673
Score = 70.7 bits (148), Expect(5) = 6e-047
Identities = 30/37 (81%), Positives = 31/37 (83%)
Frame = +1 / -2
Query: 658 PAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATG 768
PAPATLV+S RLK*EWPLMVNLIPPFFT G L * G
Sbjct: 636 PAPATLVSSPRLK*EWPLMVNLIPPFFTQGPLR*ENG 526
Score = 66.1 bits (138), Expect(5) = 6e-047
Identities = 30/44 (68%), Positives = 32/44 (72%)
Frame = +1 / -3
Query: 763 TGTMPARYCAIWRKAGWAMSKCGRGGLHQPPSSLGRP*LGGQKL 894
TGTMPAR IWR AG AMSK RGGLHQPP SLG *+G K+
Sbjct: 530 TGTMPAR*IPIWR*AGSAMSKWARGGLHQPPWSLGSA*VGRAKV 399
Score = 55.6 bits (115), Expect(5) = 6e-047
Identities = 26/31 (83%), Positives = 26/31 (83%)
Frame = +1 / -1
Query: 952 SS*QDPHAAPSLNSAVLSAAVLVPYPVLYMF 1044
SS* DPHAA SLNSAVLSAAV VP PVLY F
Sbjct: 346 SS*HDPHAALSLNSAVLSAAVFVP*PVLYRF 254
Score = 44.6 bits (91), Expect(4) = 2e-070
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / +3
Query: 935 GQSCLPGTITVTATNFCPPN 876
G SC+PG+IT+T TN CPPN
Sbjct: 357 GSSCVPGSITITVTNLCPPN 416
Score = 35.9 bits (72), Expect(5) = 6e-047
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1 / -1
Query: 877 LGGQKLVAVTVMVPGRHDCP 936
LGGQ+LV V VM+PG H+ P
Sbjct: 415 LGGQRLVTVMVMLPGTHELP 356
Score = 34.1 bits (68), Expect(5) = 6e-047
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1 / -1
Query: 1099 VAWALCHEP*STPAARWAREQKAEQS 1176
VAWA+CHE *S A R +++ AE+S
Sbjct: 199 VAWAVCHEL*SPAARRARKQKAAEKS 122
>gb|BF619242.3|BF619242 HVSMEc0015J01f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0015J01f, mRNA sequence
Length = 563
Score = 263 bits (569), Expect = 1e-069
Identities = 104/136 (76%), Positives = 109/136 (80%)
Frame = -1 / +3
Query: 1145 RAAGVDYGSWQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACG 966
+AA YG WQSAHATFY GYGN+YSTGYGTNTAALSTALFNDGAACG
Sbjct: 156 QAAAGGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACG 335
Query: 965 SCYELRCDNNGQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQ 786
SCYELRCDN G SC G+I VTATNFCPPNYGLPSDDGGWCNPPRPHFDMA+PAFL IAQ
Sbjct: 336 SCYELRCDNAGSSCRAGSIMVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQ 515
Query: 785 YRAGIVPVAYRRVPCV 738
YRAGIVP YR+ P V
Sbjct: 516 YRAGIVPCFYRKGPGV 563
Score = 185 bits (399), Expect(2) = 2e-050
Identities = 82/103 (79%), Positives = 85/103 (82%)
Frame = +1 / -2
Query: 739 THGTLL*ATGTMPARYCAIWRKAGWAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVP 918
T G L* GTMPARYCA+ RKAG AMSK GRGGLH PPSSLG P*LGGQKLVAVT+M P
Sbjct: 562 TPGPFL*KQGTMPARYCAM*RKAGSAMSKWGRGGLHHPPSSLGSP*LGGQKLVAVTMMDP 383
Query: 919 GRHDCPLLSQRSS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP 1047
RH+ P LSQRSS* DPHAAPSLNSAVLSAAV VPYPVLY P
Sbjct: 382 ARHELPALSQRSS*HDPHAAPSLNSAVLSAAVFVPYPVLYRLP 254
Score = 35.0 bits (70), Expect(2) = 2e-050
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1 / -2
Query: 1099 VAWALCHEP*STPAARWAREQKAEQS 1176
VAWALCH P* AA AR K E++
Sbjct: 202 VAWALCHPP*PPAAACRARRHKEEKT 125
>gb|CA022537.1|CA022537 HZ43I17r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ43I17
5-PRIME, mRNA sequence
Length = 522
Score = 262 bits (566), Expect = 4e-069
Identities = 102/129 (79%), Positives = 107/129 (82%)
Frame = -1 / +3
Query: 1145 RAAGVDYGSWQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACG 966
+AA YG WQSAHATFY GYGN+YSTGYGTNTAALSTALFNDGAACG
Sbjct: 135 QAAAGGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACG 314
Query: 965 SCYELRCDNNGQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQ 786
SCYELRCDN G SC PG+I VTATNFCPPNYGLPSDDGGWCNPPRPHFDMA+PAFL IAQ
Sbjct: 315 SCYELRCDNAGSSCRPGSIMVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQ 494
Query: 785 YRAGIVPVA 759
YRAGIVPV+
Sbjct: 495 YRAGIVPVS 521
Score = 197 bits (425), Expect(2) = 4e-054
Identities = 83/95 (87%), Positives = 86/95 (90%)
Frame = +1 / -3
Query: 763 TGTMPARYCAIWRKAGWAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDCPLL 942
TGTMPARYCA+WRKAG AMSK GRGGLHQPPSSLGRP*LGGQKLVAVT+M PGRH+ P L
Sbjct: 517 TGTMPARYCAMWRKAGSAMSKWGRGGLHQPPSSLGRP*LGGQKLVAVTMMDPGRHELPAL 338
Query: 943 SQRSS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP 1047
SQRSS* DPHAAPSLNSAVLSAAV VPYPVLY P
Sbjct: 337 SQRSS*HDPHAAPSLNSAVLSAAVFVPYPVLYRLP 233
Score = 35.0 bits (70), Expect(2) = 4e-054
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1 / -3
Query: 1099 VAWALCHEP*STPAARWAREQKAEQS 1176
VAWALCH P* AA AR K E++
Sbjct: 181 VAWALCHPP*PPAAACRARRHKEEKT 104
>gb|BU990530.1|BU990530 HF25F05r HF Hordeum vulgare subsp. vulgare cDNA clone HF25F05
5-PRIME, mRNA sequence
Length = 515
Score = 260 bits (562), Expect = 1e-068
Identities = 99/137 (72%), Positives = 113/137 (82%)
Frame = -1 / +1
Query: 860 DDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVL 681
DDGGWCNPP+ HFD+A+P F +IAQ RAG+VPV YRRV CVK GGIRFTI GHSYFNLVL
Sbjct: 10 DDGGWCNPPQSHFDLAEPVFTRIAQARAGVVPVQYRRVACVKTGGIRFTITGHSYFNLVL 189
Query: 680 VTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNG 501
+TNVAGAGD+ SV +K STGW MS NWG NWQ+ ++L+GQ LSF+VT SDGRT TSN
Sbjct: 190 ITNVAGAGDLMSVYVKAPSTGWLTMSHNWGANWQNGAMLNGQPLSFRVTTSDGRTTTSNN 369
Query: 500 VAPAGWQFGQTFEGAQF 450
VAP GW FGQTF G+QF
Sbjct: 370 VAPYGWTFGQTFAGSQF 420
Score = 183 bits (394), Expect = 2e-045
Identities = 85/137 (62%), Positives = 88/137 (64%)
Frame = +1 / -1
Query: 451 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLE 630
NW P+KVWP QP GAT L V VRPSL VT KD WP CQ PQL M HPVL
Sbjct: 419 NWLPAKVWPKVQP*GATLLDVVVRPSLVVTRKDSGWPLSMAPFCQLAPQLWLMVSHPVLG 240
Query: 631 PLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAG 810
TD SPAPATLV STRLK*EWP+MVN +PP TH TLL TGT PAR AI G
Sbjct: 239 AFTYTDIRSPAPATLVMSTRLK*EWPVMVNRMPPVLTHATLLYWTGTTPARAWAILVNTG 60
Query: 811 WAMSKCGRGGLHQPPSS 861
A SKC GGLH PPSS
Sbjct: 59 SARSKCDCGGLHHPPSS 9
>gb|BU989542.1|BU989542 HF22A11r HF Hordeum vulgare subsp. vulgare cDNA clone HF22A11
5-PRIME, mRNA sequence
Length = 620
Score = 231 bits (498), Expect(2) = 2e-064
Identities = 86/155 (55%), Positives = 117/155 (75%)
Frame = -1 / +3
Query: 914 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 735
+I VTATNFCPPNYG P+D GG CNPP HF + AF +IA ++AG++P+ YRRV C++
Sbjct: 63 SIVVTATNFCPPNYGFPADAGGVCNPPNHHFLLPIQAFEKIALWKAGVMPIQYRRVKCLR 242
Query: 734 KGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQ 555
+GG+RF+++G S+F VL++NV GAGDV+SV IKG+ +GW M RNWGQ W N L GQ
Sbjct: 243 EGGVRFSVSGKSFFFTVLISNVGGAGDVRSVKIKGTDSGWLDMGRNWGQIWHINLDLTGQ 422
Query: 554 SLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 450
+SF++T+SDG T+T+ V P W+FG+T+ G QF
Sbjct: 423 PVSFELTSSDGTTMTNFNVVPKDWEFGKTYTGKQF 527
Score = 138 bits (297), Expect = 4e-032
Identities = 74/154 (48%), Positives = 83/154 (53%)
Frame = +1 / -2
Query: 451 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLE 630
N P V PN Q G T V V PSL V+ KD P RS+L+C WPQLR M P
Sbjct: 526 NCLPVYVLPNSQSLGTTLKFVIVVPSLEVSSKDTGCPVRSKLMCHIWPQLRPMSSQPESV 347
Query: 631 PLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAG 810
PL+ TD TSPAP TL+ T K +P N PP H T G PA AI+ A
Sbjct: 346 PLIFTDLTSPAPPTLLIRTVKKKLFPETENRTPPSRRHLTRRYWMGMTPAFQSAIFSNAW 167
Query: 811 WAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 912
K GGL PP+S G+P*LGGQKLVAVT M
Sbjct: 166 MGRRKWWLGGLQTPPASAGKP*LGGQKLVAVTTM 65
Score = 36.3 bits (73), Expect(2) = 2e-064
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1 / +3
Query: 971 CGSCYELRCDNNGQSCLPGTITV 903
CG CYE++C + + CLPGT V
Sbjct: 3 CGGCYEVKCVEDLKYCLPGTSIV 71
>gb|BU990552.1|BU990552 HF25G07r HF Hordeum vulgare subsp. vulgare cDNA clone HF25G07
5-PRIME, mRNA sequence
Length = 565
Score = 231 bits (498), Expect(2) = 2e-064
Identities = 86/155 (55%), Positives = 117/155 (75%)
Frame = -1 / +3
Query: 914 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 735
+I VTATNFCPPNYG P+D GG CNPP HF + AF +IA ++AG++P+ YRRV C++
Sbjct: 63 SIVVTATNFCPPNYGFPADAGGVCNPPNHHFLLPIQAFEKIALWKAGVMPIQYRRVKCLR 242
Query: 734 KGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQ 555
+GG+RF+++G S+F VL++NV GAGDV+SV IKG+ +GW M RNWGQ W N L GQ
Sbjct: 243 EGGVRFSVSGKSFFFTVLISNVGGAGDVRSVKIKGTDSGWLDMGRNWGQIWHINLDLTGQ 422
Query: 554 SLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 450
+SF++T+SDG T+T+ V P W+FG+T+ G QF
Sbjct: 423 PVSFELTSSDGTTMTNFNVVPKDWEFGKTYTGKQF 527
Score = 138 bits (297), Expect = 4e-032
Identities = 74/154 (48%), Positives = 83/154 (53%)
Frame = +1 / -1
Query: 451 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLE 630
N P V PN Q G T V V PSL V+ KD P RS+L+C WPQLR M P
Sbjct: 526 NCLPVYVLPNSQSLGTTLKFVIVVPSLEVSSKDTGCPVRSKLMCHIWPQLRPMSSQPESV 347
Query: 631 PLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAG 810
PL+ TD TSPAP TL+ T K +P N PP H T G PA AI+ A
Sbjct: 346 PLIFTDLTSPAPPTLLIRTVKKKLFPETENRTPPSRRHLTRRYWMGMTPAFQSAIFSNAW 167
Query: 811 WAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 912
K GGL PP+S G+P*LGGQKLVAVT M
Sbjct: 166 MGRRKWWLGGLQTPPASAGKP*LGGQKLVAVTTM 65
Score = 36.3 bits (73), Expect(2) = 2e-064
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1 / +3
Query: 971 CGSCYELRCDNNGQSCLPGTITV 903
CG CYE++C + + CLPGT V
Sbjct: 3 CGGCYEVKCVEDLKYCLPGTSIV 71
>gb|BQ766938.1|BQ766938 EBro08_SQ007_D18_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_D18 5', mRNA sequence
Length = 629
Score = 182 bits (391), Expect(2) = 8e-064
Identities = 70/104 (67%), Positives = 82/104 (78%)
Frame = -1 / +3
Query: 914 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 735
+IT+TATNFCPPNY L SD+GGWCNPPR HFDM+QPA+ IA Y+AGIVPV Y+RVPC +
Sbjct: 318 SITITATNFCPPNYALASDNGGWCNPPRQHFDMSQPAWETIAIYQAGIVPVNYKRVPCQR 497
Query: 734 KGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMS 603
GG+RFTING+ YF LV V NV G+G V + IKGS T W MS
Sbjct: 498 SGGMRFTINGNDYFELVTVANVGGSGVVSQMWIKGSKTDWMVMS 629
Score = 123 bits (264), Expect(2) = 4e-035
Identities = 60/97 (61%), Positives = 66/97 (68%)
Frame = +1 / -2
Query: 622 VLEPLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWR 801
VL+PL+ T+P P T T T K* +PLMVNL+PP GTLL* TGTMPA A+
Sbjct: 610 VLDPLIHIWDTTPLPPTFATVTSSK*SFPLMVNLMPPLLWQGTLL*LTGTMPAW*MAMVS 431
Query: 802 KAGWAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 912
AG MSKC RGGLH PP SL R *LGGQKLVAV VM
Sbjct: 430 HAGCDMSKCCRGGLHHPPLSLARA*LGGQKLVAVMVM 320
Score = 83.1 bits (175), Expect(2) = 8e-064
Identities = 33/75 (44%), Positives = 43/75 (57%)
Frame = -1 / +3
Query: 1118 WQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDN 939
W A ATFY GYGN+Y+ GYG N+AALSTALFN+GA+CG C+ + CD
Sbjct: 108 WMPAFATFYGGSDASDTMGGACGYGNLYNAGYGVNSAALSTALFNNGASCGMCFTITCDA 287
Query: 938 NGQSCLPGTITVTAT 894
+ ++T T
Sbjct: 288 SKTQSCKQGTSITIT 332
Score = 45.1 bits (92), Expect(2) = 4e-035
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +1 / -2
Query: 967 PHAAPSLNSAVLSAAVLVPYPVLYMFP 1047
PH AP L AVL+AA L PYP LY FP
Sbjct: 259 PHDAPLLKRAVLNAAELTPYPALYKFP 179
>gb|BF256452.2|BF256452 HVSMEf0010A02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010A02f, mRNA sequence
Length = 839
Score = 197 bits (424), Expect(2) = 1e-063
Identities = 77/144 (53%), Positives = 103/144 (71%)
Frame = -1 / +1
Query: 914 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 735
+I VTATNFCPPNYG P+D GG CNPP HF + AF +IA ++AG++P+ YRRV C++
Sbjct: 181 SIVVTATNFCPPNYGFPADAGGVCNPPNHHFLLPIQAFEKIALWKAGVMPIQYRRVKCLR 360
Query: 734 KGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQ 555
+GG+RF+++G S+F VL++NV GAGDV+S IKG+ +GW M RNWGQ W L GQ
Sbjct: 361 EGGVRFSVSGKSFFFTVLISNVGGAGDVRSRKIKGTDSGWLYMGRNWGQIWVIIFDLTGQ 540
Query: 554 SLSFQVTASDGRTVTSNGVAPAGW 483
+SF +T DG T T+N P G+
Sbjct: 541 PVSFGLTLGDGATKTNNYRVPQGY 612
Score = 116 bits (248), Expect = 3e-025
Identities = 65/142 (45%), Positives = 75/142 (52%)
Frame = +1 / -1
Query: 487 PAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLEPLMDTDCTSPAP 666
P G L V V PS V+ KD P RS+++ WPQLR M P PL+ D TSPAP
Sbjct: 608 PWGTR*LFVFVAPSPKVSPKDTGCPVRSKIMTHIWPQLRPM*SQPESVPLIFLDLTSPAP 429
Query: 667 ATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGWAMSKCGRGGLH 846
TL+ T K +P N PP H T G PA AI+ A K GGL
Sbjct: 428 PTLLIRTVKKKLFPETENRTPPSRRHLTRRYWMGMTPAFQSAIFSNAWMGRRKWWLGGLQ 249
Query: 847 QPPSSLGRP*LGGQKLVAVTVM 912
PP+S G+P*LGGQKLVAVT M
Sbjct: 248 TPPASAGKP*LGGQKLVAVTTM 183
Score = 67.0 bits (140), Expect(2) = 1e-063
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = -1 / +1
Query: 1049 YGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDNNGQSCLPGTITV 903
+G++ GYG T LSTALF GAACG CYE++C + + CLPGT V
Sbjct: 43 FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVEDLKYCLPGTSIV 189
>gb|BQ762357.1|BQ762357 EBro01_SQ005_H18_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_H18 5', mRNA sequence
Length = 535
Score = 226 bits (488), Expect(2) = 3e-062
Identities = 91/103 (88%), Positives = 95/103 (92%)
Frame = -1 / +1
Query: 758 YRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQ 579
Y RVPCVKKGG+RFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSS+GWQ MSRNWGQNWQ
Sbjct: 7 YCRVPCVKKGGMRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSSGWQAMSRNWGQNWQ 186
Query: 578 SNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 450
SN+ LDGQSLSF+VT SDGRTVTSN APAGW FGQTFEG QF
Sbjct: 187 SNADLDGQSLSFRVTLSDGRTVTSNNAAPAGWSFGQTFEGGQF 315
Score = 213 bits (459), Expect(2) = 6e-057
Identities = 86/101 (85%), Positives = 89/101 (88%)
Frame = +1 / -3
Query: 451 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLE 630
NW PSKV P QPAGA LLVTVRPSL VT K+RLWPSRS LLCQFWPQLRDM CHP L+
Sbjct: 314 NWPPSKVCPKDQPAGAALLLVTVRPSLRVTRKERLWPSRSALLCQFWPQLRDMACHPELD 135
Query: 631 PLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTL 753
PLM+TDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFT GTL
Sbjct: 134 PLMETDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTQGTL 12
Score = 33.1 bits (66), Expect(2) = 3e-062
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = -2 / +3
Query: 364 AIPRLLIISTRLGISFSY 311
AI RLL+ISTRLG+SFS+
Sbjct: 420 AILRLLLISTRLGLSFSH 473
Score = 29.0 bits (57), Expect(2) = 6e-057
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2 / -3
Query: 311 IREGNA*AGANNKQPRN 361
+REG A*AGA+ +QP+N
Sbjct: 473 MREGKA*AGADQQQPQN 423
>gb|CA025602.1|CA025602 HZ52K01r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52K01
5-PRIME, mRNA sequence
Length = 418
Score = 180 bits (387), Expect(2) = 3e-062
Identities = 69/89 (77%), Positives = 76/89 (85%)
Frame = -1 / +2
Query: 893 NFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFT 714
NFCPPN+G SD GGWCNPPR HFDM+QP F +IA YRAGIVPV+YRRV C KKGGIRFT
Sbjct: 17 NFCPPNFGESSDAGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACQKKGGIRFT 196
Query: 713 INGHSYFNLVLVTNVAGAGDVQSVSIKGS 627
INGHSYFNLVLVTNV G GDV +VS+K +
Sbjct: 197 INGHSYFNLVLVTNVGGPGDVHAVSVKST 283
Score = 142 bits (305), Expect(2) = 1e-040
Identities = 62/87 (71%), Positives = 66/87 (75%)
Frame = +1 / -2
Query: 634 LMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGW 813
L DT CTSP P TLVTSTRLK EWPL+VNL+PPFF H TL * TGTMPAR A+ K GW
Sbjct: 276 LTDTACTSPGPPTLVTSTRLKYEWPLIVNLMPPFFWHATLR*ETGTMPAR*SAMRWKTGW 97
Query: 814 AMSKCGRGGLHQPPSSLGRP*LGGQKL 894
MSK RGGLHQPP+S P LGGQKL
Sbjct: 96 DMSKWARGGLHQPPASDDSPKLGGQKL 16
Score = 79.4 bits (167), Expect(2) = 3e-062
Identities = 29/41 (70%), Positives = 35/41 (85%)
Frame = -1 / +2
Query: 626 STGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSN 504
S WQ +SRNWGQNWQSN+LLDGQ LSF+VTA +G++V SN
Sbjct: 287 SAAWQALSRNWGQNWQSNALLDGQGLSFRVTAGNGQSVVSN 409
Score = 45.1 bits (92), Expect(2) = 1e-040
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +1 / -2
Query: 523 PSLAVTWKDRLWPSRSELLCQFWPQLRDMGCH 618
P AVT +R PS S LLCQF PQLR+ CH
Sbjct: 390 PLPAVTRNERPCPSSSALLCQFCPQLRESACH 295
>gb|CA017256.1|CA017256 HV14F10u HV Hordeum vulgare subsp. vulgare cDNA clone HV14F10
3-PRIME, mRNA sequence
Length = 532
Score = 237 bits (512), Expect = 1e-061
Identities = 91/144 (63%), Positives = 111/144 (77%)
Frame = -1 / -3
Query: 896 TNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRF 717
TNFCPPN+ LPS++GGWCNPPR HFDM+QPA+ IA Y+AGIVPV Y+RV C K+ GIRF
Sbjct: 530 TNFCPPNWALPSNNGGWCNPPRLHFDMSQPAWTSIAIYQAGIVPVMYKRVSCQKRDGIRF 351
Query: 716 TINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQSLSFQV 537
I+G YF LV+VTNV G+G V + IKGS+T W MSRNWG NWQSN+ L+GQ LSF+V
Sbjct: 350 GISGRDYFELVVVTNVGGSGVVVQMWIKGSNTNWLAMSRNWGANWQSNAYLNGQRLSFRV 171
Query: 536 TASDGRTVTSNGVAPAGWQFGQTF 465
DGR T++ VAP+ W FG T+
Sbjct: 170 RLDDGREATASDVAPSNWWFGATY 99
Score = 146 bits (313), Expect = 3e-034
Identities = 77/143 (53%), Positives = 86/143 (60%)
Frame = +1 / +1
Query: 469 VWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLEPLMDTD 648
V PN Q GAT L V RPS ++T K+ LWP R LLCQF PQ R M VLEPL+
Sbjct: 103 VAPNHQLDGATSLAVASRPSSSLTLKESLWPLR*ALLCQFAPQFRLMASQLVLEPLIHIC 282
Query: 649 CTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGWAMSKC 828
T+P P TLVT+T K* P M +P F TLL TGTMPA A+ +AG MSK
Sbjct: 283 TTTPLPPTLVTTTSSK*SLPEMPKRMPSRFWQETLLYMTGTMPAW*MAMLVQAGCDMSKW 462
Query: 829 GRGGLHQPPSSLGRP*LGGQKLV 897
RGGLH PP LG LGGQKLV
Sbjct: 463 RRGGLHHPPLLLGSAQLGGQKLV 531
>gb|BU989257.1|BU989257 HF21D19r HF Hordeum vulgare subsp. vulgare cDNA clone HF21D19
5-PRIME, mRNA sequence
Length = 522
Score = 226 bits (488), Expect(2) = 2e-060
Identities = 84/152 (55%), Positives = 115/152 (75%)
Frame = -1 / +3
Query: 914 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 735
+I VTATNFCPPNYG P+D GG CNPP HF + AF +IA ++AG++P+ YRRV C++
Sbjct: 63 SIVVTATNFCPPNYGFPADAGGVCNPPNHHFLLPIQAFEKIALWKAGVMPIQYRRVKCLR 242
Query: 734 KGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQ 555
+GG+RF+++G S+F VL++NV GAGDV+SV IKG+ +GW M RNWGQ W N L GQ
Sbjct: 243 EGGVRFSVSGKSFFFTVLISNVGGAGDVRSVKIKGTDSGWLDMGRNWGQIWHINLDLTGQ 422
Query: 554 SLSFQVTASDGRTVTSNGVAPAGWQFGQTFEG 459
+SF++T+SDG T+T+ V P W+FG+T+ G
Sbjct: 423 PVSFELTSSDGTTMTNFNVVPKDWEFGKTYTG 518
Score = 137 bits (294), Expect = 1e-031
Identities = 73/151 (48%), Positives = 82/151 (54%)
Frame = +1 / -3
Query: 460 PSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLEPLM 639
P V PN Q G T V V PSL V+ KD P RS+L+C WPQLR M P PL+
Sbjct: 517 PVYVLPNSQSLGTTLKFVIVVPSLEVSSKDTGCPVRSKLMCHIWPQLRPMSSQPESVPLI 338
Query: 640 DTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGWAM 819
TD TSPAP TL+ T K +P N PP H T G PA AI+ A
Sbjct: 337 FTDLTSPAPPTLLIRTVKKKLFPETENRTPPSRRHLTRRYWMGMTPAFQSAIFSNAWMGR 158
Query: 820 SKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 912
K GGL PP+S G+P*LGGQKLVAVT M
Sbjct: 157 RKWWLGGLQTPPASAGKP*LGGQKLVAVTTM 65
Score = 27.6 bits (54), Expect(2) = 2e-060
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1 / +3
Query: 971 CGSCYELRCDNNGQSCLPGTITV 903
CG Y ++C + + CLPGT V
Sbjct: 3 CGG*YAVKCVEDLKYCLPGTSIV 71
>gb|BQ461074.1|BQ461074 HE01E19r HE Hordeum vulgare subsp. vulgare cDNA clone HE01E19
5-PRIME, mRNA sequence
Length = 397
Score = 202 bits (435), Expect(2) = 4e-060
Identities = 77/104 (74%), Positives = 88/104 (84%)
Frame = -1 / +2
Query: 776 GIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRN 597
GIVPV Y+RVPC KKGG+RFT+NGH YF LVLV+NV G ++SVSIKGS TGW PMSRN
Sbjct: 86 GIVPVLYQRVPCAKKGGVRFTVNGHDYFELVLVSNVGSVGSIRSVSIKGSRTGWMPMSRN 265
Query: 596 WGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTF 465
WG NWQSN+LL GQSLSFQVT++DG+T+T VAPAGW FGQTF
Sbjct: 266 WGVNWQSNALLSGQSLSFQVTSTDGQTITFPNVAPAGWGFGQTF 397
Score = 138 bits (297), Expect(2) = 5e-037
Identities = 62/104 (59%), Positives = 66/104 (63%)
Frame = +1 / -2
Query: 466 KVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLEPLMDT 645
KVWP PAGAT V V PS+ VTW +RL P S L CQ PQ DMG HPV +PLMDT
Sbjct: 396 KVWPKPHPAGATLGKVIVWPSVLVTWNERLCPLSSALDCQLTPQFLDMGIHPVRDPLMDT 217
Query: 646 DCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMP 777
D P TL+TST K* WPL VNL PPF GT * TGTMP
Sbjct: 216 DRMEPTLPTLLTSTSSK*SWPLTVNLTPPFLAQGTRW*RTGTMP 85
Score = 50.6 bits (104), Expect(2) = 4e-060
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -1 / +2
Query: 914 TITVTATNFCPPNYGLPSDDGG 849
++T+TATN CPPNY LP+DDGG
Sbjct: 23 SVTITATNLCPPNYALPNDDGG 88
Score = 36.3 bits (73), Expect(2) = 5e-037
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1 / -2
Query: 850 PPSSLGRP*LGGQKLVAVTV 909
PPSSLG *LGGQ+LVAV V
Sbjct: 87 PPSSLGSA*LGGQRLVAVMV 28
>gb|BF257120.2|BF257120 HVSMEf0011O18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0011O18f, mRNA sequence
Length = 539
Score = 120 bits (257), Expect(3) = 6e-060
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = -1 / +1
Query: 935 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVP 765
G SC+PG+IT+TATN CP NY L +DDGGWCNPPR HFDMA+PA+LQI YRAGIVP
Sbjct: 334 GSSCVPGSITITATNLCPANYALANDDGGWCNPPRAHFDMAKPAYLQIGIYRAGIVP 504
Score = 120 bits (257), Expect(3) = 6e-060
Identities = 48/70 (68%), Positives = 52/70 (74%)
Frame = -1 / +1
Query: 1145 RAAGVDYGSWQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACG 966
R A DYGSWQ+AHATFY GYGN+YSTGYGTNTAALSTALFNDGAACG
Sbjct: 130 RRAAGDYGSWQTAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACG 309
Query: 965 SCYELRCDNN 936
SCYEL+C +
Sbjct: 310 SCYELKCQGS 339
Score = 93.6 bits (198), Expect(4) = 6e-040
Identities = 40/57 (70%), Positives = 44/57 (77%)
Frame = +1 / -1
Query: 766 GTMPARYCAIWRKAGWAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDCP 936
GTMPAR IWR AG+AMSK RGGLHQPPSSL *L GQ+LVAV VM+PG H+ P
Sbjct: 503 GTMPAR*IPIWR*AGFAMSKWARGGLHQPPSSLASA*LAGQRLVAVMVMLPGTHELP 333
Score = 63.8 bits (133), Expect(4) = 6e-040
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +1 / -1
Query: 952 SS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP* 1050
SS* DPHAAPSLNSAVLSAAV VP PVLY FP*
Sbjct: 323 SS*HDPHAAPSLNSAVLSAAVFVP*PVLYRFP* 225
Score = 38.6 bits (78), Expect(4) = 6e-040
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1 / -1
Query: 1099 VAWALCHEP*STPAARWAREQKAEQS 1176
VAWA+CHEP*S A R +++ AE+S
Sbjct: 176 VAWAVCHEP*SPAARRARKQKAAEKS 99
Score = 29.5 bits (58), Expect(3) = 6e-060
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / +2
Query: 767 PVAYRRVPCVK 735
PV+YRRVPCVK
Sbjct: 503 PVSYRRVPCVK 535
Score = 24.9 bits (48), Expect(4) = 6e-040
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3 / -2
Query: 732 LLHARHPPVGD 764
+LHA HPPVG+
Sbjct: 538 VLHAGHPPVGN 506
>gb|BG368084.2|BG368084 HVSMEi0015J17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0015J17f, mRNA sequence
Length = 852
Score = 150 bits (323), Expect(2) = 7e-059
Identities = 59/90 (65%), Positives = 67/90 (74%)
Frame = -1 / +1
Query: 914 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 735
+I VTATNFCPPNY LPSDDGGWCNPPRPHFD+A P FL +AQYRAGIVPV YRRV C K
Sbjct: 397 SIVVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHMAQYRAGIVPVCYRRVACRK 576
Query: 734 KGGIRFTINGHSYFNLVLVTNVAGAGDVQS 645
GG+RFTI +L L GA +++
Sbjct: 577 SGGVRFTIERVQSSDLRLEKTRRGARSLET 666
Score = 109 bits (233), Expect(2) = 8e-032
Identities = 52/84 (61%), Positives = 56/84 (66%)
Frame = +1 / -2
Query: 661 APATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGWAMSKCGRGG 840
AP + +S R + MVN PP F H T * TGTMPARY A+WR G A SK GRGG
Sbjct: 650 APLLVFSSLRSELCTRSMVNRTPPDFRHATRR*QTGTMPARYWAMWRNMGMARSKWGRGG 471
Query: 841 LHQPPSSLGRP*LGGQKLVAVTVM 912
LHQPPSS G *LGGQKLVAVT M
Sbjct: 470 LHQPPSSEGSA*LGGQKLVAVTTM 399
Score = 97.7 bits (207), Expect(2) = 7e-059
Identities = 37/62 (59%), Positives = 43/62 (69%)
Frame = -1 / +1
Query: 1124 GSWQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 945
G WQSAHATFY GYGN+YS GYG N AALSTALFN+G +CG+C+E+RC
Sbjct: 175 GDWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNEGQSCGACFEIRC 354
Query: 944 DN 939
N
Sbjct: 355 VN 360
Score = 48.3 bits (99), Expect(2) = 8e-032
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +1 / -2
Query: 943 SQRSS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP 1047
+ R S P PSLNSAVLSAA+ PYP LY FP
Sbjct: 356 THRISKHAPQLCPSLNSAVLSAALFTPYPWLYRFP 252
>gb|BQ663324.1|BQ663324 HU02C09u HU Hordeum vulgare subsp. vulgare cDNA clone HU02C09
3-PRIME, mRNA sequence
Length = 492
Score = 121 bits (259), Expect(2) = 6e-057
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = -1 / +1
Query: 935 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAG 774
G SC+PG+IT+TATN CPPNY LP+DDGGWCNPPR HFDMA+PA+LQI YRAG
Sbjct: 331 GSSCVPGSITITATNLCPPNYALPNDDGGWCNPPRAHFDMAEPAYLQIGIYRAG 492
Score = 120 bits (257), Expect(2) = 6e-057
Identities = 48/70 (68%), Positives = 52/70 (74%)
Frame = -1 / +1
Query: 1145 RAAGVDYGSWQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACG 966
R A DYGSWQ+AHATFY GYGN+YSTGYGTNTAALSTALFNDGAACG
Sbjct: 127 RRAAGDYGSWQTAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACG 306
Query: 965 SCYELRCDNN 936
SCYEL+C +
Sbjct: 307 SCYELKCQGS 336
Score = 90.0 bits (190), Expect(3) = 1e-036
Identities = 39/54 (72%), Positives = 42/54 (77%)
Frame = +1 / -2
Query: 775 PARYCAIWRKAGWAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDCP 936
PAR IWR AG AMSK RGGLHQPPSSLG *LGGQ+LVAV VM+PG H+ P
Sbjct: 491 PAR*IPIWR*AGSAMSKWARGGLHQPPSSLGSA*LGGQRLVAVMVMLPGTHELP 330
Score = 63.8 bits (133), Expect(3) = 1e-036
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +1 / -2
Query: 952 SS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP* 1050
SS* DPHAAPSLNSAVLSAAV VP PVLY FP*
Sbjct: 320 SS*HDPHAAPSLNSAVLSAAVFVP*PVLYRFP* 222
Score = 38.6 bits (78), Expect(3) = 1e-036
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1 / -2
Query: 1099 VAWALCHEP*STPAARWAREQKAEQS 1176
VAWA+CHEP*S A R +++ AE+S
Sbjct: 173 VAWAVCHEP*SPAARRARKQKAAEKS 96
>gb|BI953531.1|BI953531 HVSMEm0013B19f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0013B19f, mRNA sequence
Length = 626
Score = 219 bits (472), Expect = 3e-056
Identities = 83/91 (91%), Positives = 86/91 (94%)
Frame = -1 / +3
Query: 1022 GTNTAALSTALFNDGAACGSCYELRCDNNGQSCLPGTITVTATNFCPPNYGLPSDDGGWC 843
GTNTAALSTALFNDGAACGSCYELRCDN G SC PG+I VTATNFCPPNYGLPSDDGGWC
Sbjct: 3 GTNTAALSTALFNDGAACGSCYELRCDNAGSSCRPGSIMVTATNFCPPNYGLPSDDGGWC 182
Query: 842 NPPRPHFDMAQPAFLQIAQYRAGIVPVAYRR 750
NPPRPHFDMA+PAFL IAQYRAGIVPV+YRR
Sbjct: 183 NPPRPHFDMAEPAFLHIAQYRAGIVPVSYRR 275
Score = 185 bits (398), Expect = 5e-046
Identities = 80/91 (87%), Positives = 83/91 (91%)
Frame = +1 / -2
Query: 751 LL*ATGTMPARYCAIWRKAGWAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHD 930
LL* TGTMPARYCA+WRKAG AMSK GRGGLHQPPSSLGRP*LGGQKLVAVT+M PGRH+
Sbjct: 274 LL*ETGTMPARYCAMWRKAGSAMSKWGRGGLHQPPSSLGRP*LGGQKLVAVTMMDPGRHE 95
Query: 931 CPLLSQRSS*QDPHAAPSLNSAVLSAAVLVP 1023
P LSQRSS* DPHAAPSLNSAVLSAAV VP
Sbjct: 94 LPALSQRSS*HDPHAAPSLNSAVLSAAVFVP 2
>gb|CA017681.1|CA017681 HV05O14r HV Hordeum vulgare subsp. vulgare cDNA clone HV05O14
5-PRIME, mRNA sequence
Length = 443
Score = 136 bits (292), Expect(2) = 6e-055
Identities = 48/72 (66%), Positives = 60/72 (83%)
Frame = -1 / +2
Query: 914 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 735
T+T+TATN CP +Y P+D+GGWCNPPR H DMAQPA+ +I YRAGIVPV ++RVPC +
Sbjct: 227 TVTITATNLCPTDYSKPNDNGGWCNPPRKHLDMAQPAWERIGIYRAGIVPVLFQRVPCSR 406
Query: 734 KGGIRFTINGHS 699
GG+RFTINGH+
Sbjct: 407 SGGVRFTINGHA 442
Score = 98.7 bits (209), Expect(2) = 6e-055
Identities = 39/75 (52%), Positives = 46/75 (61%)
Frame = -1 / +2
Query: 1118 WQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRCDN 939
W ATFY GYGN+Y+TGYGTNTAALST+LFNDGAACG CY+++CD
Sbjct: 17 WMRGSATFYGGSNAAGTMGGACGYGNLYATGYGTNTAALSTSLFNDGAACGECYQVQCDR 196
Query: 938 NGQSCLPGTITVTAT 894
+TVT T
Sbjct: 197 GSSPNCKPGVTVTIT 241
Score = 90.9 bits (192), Expect(2) = 6e-027
Identities = 43/71 (60%), Positives = 46/71 (64%)
Frame = +1 / -3
Query: 703 WPLMVNLIPPFFTHGTLL*ATGTMPARYCAIWRKAGWAMSKCGRGGLHQPPSSLGRP*LG 882
WPLMVN PP GT TGTMPAR + AG AMS+C RGGLHQPP SLG *
Sbjct: 438 WPLMVNRTPPLLEQGTRWNRTGTMPAR*MPMRSHAGCAMSRCLRGGLHQPPLSLGLE*SV 259
Query: 883 GQKLVAVTVMV 915
GQ+LVAV V V
Sbjct: 258 GQRLVAVMVTV 226
Score = 50.6 bits (104), Expect(2) = 6e-027
Identities = 23/36 (63%), Positives = 24/36 (66%)
Frame = +1 / -3
Query: 940 LSQRSS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP 1047
LS + * PHAAPSL VLSAAV VPYPV Y P
Sbjct: 195 LSHCTW*HSPHAAPSLKRDVLSAAVFVPYPVAYRLP 88
>gb|AV922591.1|AV922591 AV922591 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18m24 3', mRNA sequence
Length = 701
Score = 209 bits (451), Expect = 3e-053
Identities = 83/96 (86%), Positives = 88/96 (91%)
Frame = -1 / -3
Query: 737 KKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDG 558
KKGGIRFTINGHSYFNLVLVTNVAGAGD +SVSIKG+ TGWQ MSRNWG NWQSN+ LDG
Sbjct: 699 KKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSNTFLDG 520
Query: 557 QSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 450
Q LSF+VT+SDGRTVTSN APAGWQFGQTFEGAQF
Sbjct: 519 QCLSFRVTSSDGRTVTSNAAAPAGWQFGQTFEGAQF 412
Score = 193 bits (416), Expect = 2e-048
Identities = 78/96 (81%), Positives = 81/96 (84%)
Frame = +1 / +2
Query: 451 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLE 630
NWAPSKVWPNCQPAGA LLVTVRPSL VT K+R WPSR LLCQF PQLRDM C PV
Sbjct: 413 NWAPSKVWPNCQPAGAAALLVTVRPSLEVTLKERHWPSRKVLLCQFMPQLRDMACQPVRV 592
Query: 631 PLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFF 738
PLMDT+ SPAPATLVTSTRLK*EWPLMVN +PPFF
Sbjct: 593 PLMDTERASPAPATLVTSTRLK*EWPLMVNRMPPFF 700
>gb|BI777322.2|BI777322 EBro03_SQ002_N24_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ002_N24 5', mRNA sequence
Length = 370
Score = 207 bits (447), Expect = 9e-053
Identities = 74/111 (66%), Positives = 95/111 (85%)
Frame = -1 / +1
Query: 914 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVK 735
+ITV+ATNFCPPN+ LPSD+GGWCNPPR HFDM+QPA+ I YRAGI+PV Y++V C +
Sbjct: 34 SITVSATNFCPPNWDLPSDNGGWCNPPRHHFDMSQPAWENIGIYRAGIIPVFYQQVKCWR 213
Query: 734 KGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNW 582
+GG+RFTING +YF LVLV N+AG+G ++S+S+KG++T W PMSRNWG NW
Sbjct: 214 QGGVRFTINGFNYFELVLVANIAGSGSIKSMSVKGTNTAWIPMSRNWGANW 366
Score = 124 bits (265), Expect = 1e-027
Identities = 62/111 (55%), Positives = 67/111 (60%)
Frame = +1 / -3
Query: 580 CQFWPQLRDMGCHPVLEPLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL* 759
CQ PQ D+G H VL P D P PA L T+T K* PLMVN PP H T *
Sbjct: 368 CQLAPQFLDIGIHAVLVPFTDMLLIDPLPAMLATNTSSK*LKPLMVNRTPPCLQHLTCW* 189
Query: 760 ATGTMPARYCAIWRKAGWAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 912
TG MPAR ++ +AG MSK RGGLH PP SLGR LGGQKLVA TVM
Sbjct: 188 KTGMMPAR*MPMFSQAGCDMSKW*RGGLHHPPLSLGRSQLGGQKLVAETVM 36
>gb|AV913816.1|AV913816 AV913816 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23g08 5', mRNA sequence
Length = 657
Score = 112 bits (239), Expect(2) = 9e-052
Identities = 41/59 (69%), Positives = 47/59 (79%)
Frame = -1 / +2
Query: 626 STGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 450
S WQ +SRNWGQNWQSN+LLDGQ LSF+VTA +G++V SN P GW FGQTF GAQF
Sbjct: 182 SAAWQALSRNWGQNWQSNALLDGQGLSFRVTAGNGQSVVSNNAVPRGWSFGQTFSGAQF 358
Score = 112 bits (239), Expect(2) = 9e-052
Identities = 46/59 (77%), Positives = 51/59 (86%)
Frame = -1 / +2
Query: 803 FLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGS 627
F +IA YRAGIVPV+YRRV C KKGGIRFTINGHSYFNLVLVTNV G GDV +VS+K +
Sbjct: 2 FQRIALYRAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGPGDVHAVSVKST 178
Score = 94.1 bits (199), Expect(2) = 9e-036
Identities = 39/50 (78%), Positives = 41/50 (82%)
Frame = +1 / -1
Query: 634 LMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPAR 783
L DT CTSP P TLVTSTRLK EWPL+VNL+PPFF H TL * TGTMPAR
Sbjct: 171 LTDTACTSPGPPTLVTSTRLKYEWPLIVNLMPPFFWHATLR*ETGTMPAR 22
Score = 77.1 bits (162), Expect(2) = 9e-036
Identities = 33/56 (58%), Positives = 35/56 (62%)
Frame = +1 / -1
Query: 451 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCH 618
NWAP KVWPN QP G L T P AVT +R PS S LLCQF PQLR+ CH
Sbjct: 357 NWAPLKVWPNDQPRGTALLETTDWPLPAVTRNERPCPSSSALLCQFCPQLRESACH 190
>gb|BJ464959.1|BJ464959 BJ464959 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36l22 5', mRNA sequence
Length = 639
Score = 112 bits (239), Expect(2) = 9e-052
Identities = 41/59 (69%), Positives = 47/59 (79%)
Frame = -1 / +2
Query: 626 STGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 450
S WQ +SRNWGQNWQSN+LLDGQ LSF+VTA +G++V SN P GW FGQTF GAQF
Sbjct: 182 SAAWQALSRNWGQNWQSNALLDGQGLSFRVTAGNGQSVVSNNAVPRGWSFGQTFSGAQF 358
Score = 112 bits (239), Expect(2) = 9e-052
Identities = 46/59 (77%), Positives = 51/59 (86%)
Frame = -1 / +2
Query: 803 FLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGS 627
F +IA YRAGIVPV+YRRV C KKGGIRFTINGHSYFNLVLVTNV G GDV +VS+K +
Sbjct: 2 FQRIALYRAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGPGDVHAVSVKST 178
Score = 94.1 bits (199), Expect(2) = 9e-036
Identities = 39/50 (78%), Positives = 41/50 (82%)
Frame = +1 / -1
Query: 634 LMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPAR 783
L DT CTSP P TLVTSTRLK EWPL+VNL+PPFF H TL * TGTMPAR
Sbjct: 171 LTDTACTSPGPPTLVTSTRLKYEWPLIVNLMPPFFWHATLR*ETGTMPAR 22
Score = 77.1 bits (162), Expect(2) = 9e-036
Identities = 33/56 (58%), Positives = 35/56 (62%)
Frame = +1 / -1
Query: 451 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCH 618
NWAP KVWPN QP G L T P AVT +R PS S LLCQF PQLR+ CH
Sbjct: 357 NWAPLKVWPNDQPRGTALLETTDWPLPAVTRNERPCPSSSALLCQFCPQLRESACH 190
>gb|AV916436.1|AV916436 AV916436 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17d09 5', mRNA sequence
Length = 536
Score = 203 bits (438), Expect = 2e-051
Identities = 80/93 (86%), Positives = 85/93 (91%)
Frame = -1 / +2
Query: 752 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSN 573
RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGD +SVSIKG+ TGWQ MSRNWG NWQSN
Sbjct: 257 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSN 436
Query: 572 SLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFG 474
+ LDGQ LSF+VT+SDGRTVTSN APAGWQFG
Sbjct: 437 TFLDGQCLSFRVTSSDGRTVTSNAAAPAGWQFG 535
Score = 184 bits (396), Expect = 1e-045
Identities = 76/94 (80%), Positives = 79/94 (84%)
Frame = +1 / -3
Query: 475 PNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLEPLMDTDCT 654
PNCQPAGA LLVTVRPSL VT K+R WPSR LLCQF PQLRDM C PV PLMDT+
Sbjct: 534 PNCQPAGAAALLVTVRPSLEVTLKERHWPSRKVLLCQFMPQLRDMACQPVRVPLMDTERA 355
Query: 655 SPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL 756
SPAPATLVTSTRLK*EWPLMVN +PPFFTHGTLL
Sbjct: 354 SPAPATLVTSTRLK*EWPLMVNRMPPFFTHGTLL 253
>gb|CA009609.1|CA009609 HU14J18r HU Hordeum vulgare subsp. vulgare cDNA clone HU14J18
5-PRIME, mRNA sequence
Length = 465
Score = 120 bits (257), Expect(2) = 2e-050
Identities = 48/70 (68%), Positives = 52/70 (74%)
Frame = -1 / +3
Query: 1145 RAAGVDYGSWQSAHATFYXXXXXXXXXXXXXGYGNMYSTGYGTNTAALSTALFNDGAACG 966
R A DYGSWQ+AHATFY GYGN+YSTGYGTNTAALSTALFNDGAACG
Sbjct: 138 RRAAGDYGSWQTAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACG 317
Query: 965 SCYELRCDNN 936
SCYEL+C +
Sbjct: 318 SCYELKCQGS 347
Score = 99.6 bits (211), Expect(2) = 2e-050
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = -1 / +3
Query: 935 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMA 813
G SC+PG+IT+TATN CPPNY LP+DDGGWCNPPR HFDMA
Sbjct: 342 GSSCVPGSITITATNLCPPNYALPNDDGGWCNPPRAHFDMA 464
Score = 74.8 bits (157), Expect(3) = 3e-032
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = +1 / -3
Query: 814 AMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDCP 936
AMSK RGGLHQPPSSLG *LGGQ+LVAV VM+PG H+ P
Sbjct: 463 AMSKWARGGLHQPPSSLGSA*LGGQRLVAVMVMLPGTHELP 341
Score = 63.8 bits (133), Expect(3) = 3e-032
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +1 / -3
Query: 952 SS*QDPHAAPSLNSAVLSAAVLVPYPVLYMFP* 1050
SS* DPHAAPSLNSAVLSAAV VP PVLY FP*
Sbjct: 331 SS*HDPHAAPSLNSAVLSAAVFVP*PVLYRFP* 233
Score = 38.6 bits (78), Expect(3) = 3e-032
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +1 / -3
Query: 1099 VAWALCHEP*STPAARWAREQKAEQS 1176
VAWA+CHEP*S A R +++ AE+S
Sbjct: 184 VAWAVCHEP*SPAARRARKQKAAEKS 107
>gb|CK124288.1|CK124288 BES1824108e08 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010E088 5-PRIME, mRNA sequence
Length = 542
Score = 154 bits (331), Expect(3) = 7e-050
Identities = 56/82 (68%), Positives = 69/82 (84%)
Frame = -1 / +2
Query: 863 SDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLV 684
SD GGWCNPPRPHFDMAQPA+ +I YR GI+P+ Y+RVPCVKKGG+RFTI+GH YF LV
Sbjct: 2 SDKGGWCNPPRPHFDMAQPAWEKIGVYRGGIIPIIYQRVPCVKKGGVRFTISGHDYFQLV 181
Query: 683 LVTNVAGAGDVQSVSIKGSSTG 618
L TNVA AG V+++ ++GS +G
Sbjct: 182 LPTNVAAAGSVRAMDVRGSKSG 247
Score = 120 bits (256), Expect(2) = 3e-031
Identities = 55/82 (67%), Positives = 57/82 (69%)
Frame = +1 / -3
Query: 619 PVLEPLMDTDCTSPAPATLVTSTRLK*EWPLMVNLIPPFFTHGTLL*ATGTMPARYCAIW 798
P LEPL T PA ATLV ST K* WPLMVNL PPFFTHGTL * G MP R I+
Sbjct: 246 PDLEPLTSMALTEPAAATLVGSTSWK*SWPLMVNLTPPFFTHGTLW*MMGMMPPR*TPIF 67
Query: 799 RKAGWAMSKCGRGGLHQPPSSL 864
+AG AMSK GRGGLHQPP SL
Sbjct: 66 SQAGCAMSKWGRGGLHQPPLSL 1
Score = 60.2 bits (125), Expect(3) = 7e-050
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = -1 / +2
Query: 626 STGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAP 492
S W M+ NWG NW S + L+GQ LSF+VT +DG+T+ + V P
Sbjct: 242 SGDWMAMAHNWGANWHSLAYLNGQGLSFRVTITDGQTLVFSDVVP 376
Score = 35.9 bits (72), Expect(2) = 3e-031
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1 / -3
Query: 493 GATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQL 600
G T +V PS+ VT K+ WP R CQF PQL
Sbjct: 375 GTTSEKTSVWPSVMVTLKESPWPLR*ARECQFAPQL 268
Score = 22.1 bits (42), Expect(3) = 7e-050
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1 / +3
Query: 491 AGWQFGQTF 465
A W+FGQTF
Sbjct: 378 ATWRFGQTF 404
>gb|CA025455.1|CA025455 HZ52D12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52D12
5-PRIME, mRNA sequence
Length = 475
Score = 190 bits (409), Expect = 2e-047
Identities = 75/88 (85%), Positives = 80/88 (90%)
Frame = -1 / +3
Query: 713 INGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQSLSFQVT 534
INGHSYFNLVLVTNVAGAGD +SVSIKG+ TGWQ MSRNWG NWQSN+ LDGQ LSF+VT
Sbjct: 12 INGHSYFNLVLVTNVAGAGDARSVSIKGTRTGWQAMSRNWGMNWQSNTFLDGQCLSFRVT 191
Query: 533 ASDGRTVTSNGVAPAGWQFGQTFEGAQF 450
+SDGRTVTSN APAGWQFGQTFEGAQF
Sbjct: 192 SSDGRTVTSNAAAPAGWQFGQTFEGAQF 275
Score = 177 bits (381), Expect = 1e-043
Identities = 72/88 (81%), Positives = 74/88 (84%)
Frame = +1 / -1
Query: 451 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKDRLWPSRSELLCQFWPQLRDMGCHPVLE 630
NWAPSKVWPNCQPAGA LLVTVRPSL VT K+R WPSR LLCQF PQLRDM C PV
Sbjct: 274 NWAPSKVWPNCQPAGAAALLVTVRPSLEVTLKERHWPSRKVLLCQFMPQLRDMACQPVRV 95
Query: 631 PLMDTDCTSPAPATLVTSTRLK*EWPLM 714
PLMDT+ SPAPATLVTSTRLK*EWPLM
Sbjct: 94 PLMDTERASPAPATLVTSTRLK*EWPLM 11
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 496,584,329
Number of Sequences: 312970
Number of extensions: 8448155
Number of successful extensions: 64320
Number of sequences better than 1.0e-020: 108
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 15462584530
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)