TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738875.2.1
(761 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ448784.1|BJ448784 BJ448784 K. Sato unpublished cDNA li... 319 8e-087
gb|BJ448811.1|BJ448811 BJ448811 K. Sato unpublished cDNA li... 319 8e-087
gb|BJ458471.1|BJ458471 BJ458471 K. Sato unpublished cDNA li... 319 8e-087
gb|BJ461948.1|BJ461948 BJ461948 K. Sato unpublished cDNA li... 319 8e-087
gb|BJ461920.1|BJ461920 BJ461920 K. Sato unpublished cDNA li... 298 3e-082
gb|AV909045.1|AV909045 AV909045 K. Sato unpublished cDNA li... 303 5e-082
gb|BJ450964.1|BJ450964 BJ450964 K. Sato unpublished cDNA li... 303 5e-082
emb|Y09233.1|HVCHS2 H.vulgare mRNA for homoeriodictyol/erio... 284 3e-076
gb|BJ450871.1|BJ450871 BJ450871 K. Sato unpublished cDNA li... 268 2e-071
gb|AV910927.1|AV910927 AV910927 K. Sato unpublished cDNA li... 267 6e-071
gb|BJ458128.1|BJ458128 BJ458128 K. Sato unpublished cDNA li... 195 3e-049
gb|AV909853.1|AV909853 AV909853 K. Sato unpublished cDNA li... 192 2e-048
gb|BI957217.1|BI957217 HVSMEn0008D06f Hordeum vulgare rachi... 178 2e-044
gb|CX662629.1|CX662629 EST 455 Expressed sequences from Bar... 176 1e-043
gb|AV911953.1|AV911953 AV911953 K. Sato unpublished cDNA li... 161 3e-039
gb|AV929494.1|AV929494 AV929494 K. Sato unpublished cDNA li... 86 3e-028
gb|CB882479.1|CB882479 HL01P16w HL Hordeum vulgare subsp. v... 83 1e-023
gb|BQ664148.1|BQ664148 HV02B02u HV Hordeum vulgare subsp. v... 83 8e-023
gb|AV930284.1|AV930284 AV930284 K. Sato unpublished cDNA li... 86 1e-022
gb|BU970502.1|BU970502 HB14N08r BC Hordeum vulgare subsp. v... 89 2e-022
gb|AH014393.1|SEG_AY643842S Hordeum vulgare subsp. vulgare ... 74 3e-022
gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clo... 74 3e-022
gb|AV928786.1|AV928786 AV928786 K. Sato unpublished cDNA li... 64 1e-019
gb|BJ458356.1|BJ458356 BJ458356 K. Sato unpublished cDNA li... 97 1e-019
gb|BI778287.2|BI778287 EBro07_SQ002_M07_R root, 3 week, red... 77 2e-019
gb|U43494.1|HVU43494 Hordeum vulgare chalcone synthase-like... 87 1e-016
gb|AJ428909.1|AJ428909 AJ428909 Hordeum vulgare subsp. vulg... 57 3e-012
gb|BJ459861.1|BJ459861 BJ459861 K. Sato unpublished cDNA li... 69 2e-011
gb|BQ466496.1|BQ466496 HT02L06r HT Hordeum vulgare subsp. v... 43 2e-009
gb|CK124929.1|CK124929 BES1824111A1g01 BES1824 Hordeum vulg... 43 2e-009
gb|BG417792.1|BG417792 HVSMEk0019I14f Hordeum vulgare testa... 39 3e-007
gb|BJ448866.1|BJ448866 BJ448866 K. Sato unpublished cDNA li... 51 8e-006
gb|BJ462004.1|BJ462004 BJ462004 K. Sato unpublished cDNA li... 51 8e-006
gb|BQ468299.1|BQ468299 HP01M24T HP Hordeum vulgare subsp. v... 42 0.004
gb|BQ661914.1|BQ661914 HP01M24w HP Hordeum vulgare subsp. v... 42 0.004
gb|BJ453294.1|BJ453294 BJ453294 K. Sato unpublished cDNA li... 37 0.007
gb|BJ460837.1|BJ460837 BJ460837 K. Sato unpublished cDNA li... 37 0.007
gb|BI954437.1|BI954437 HVSMEm0017O17f Hordeum vulgare green... 29 0.009
gb|AV916785.1|AV916785 AV916785 K. Sato unpublished cDNA li... 40 0.011
gb|BF620004.2|BF620004 HVSMEc0009P17f Hordeum vulgare seedl... 40 0.015
gb|BG417975.1|BG417975 HVSMEk0020G14f Hordeum vulgare testa... 40 0.015
gb|BQ661406.1|BQ661406 HM03F23u HM Hordeum vulgare subsp. v... 40 0.015
gb|BE602163.2|BE602163 HVSMEh0102M18f Hordeum vulgare 5-45 ... 37 0.021
gb|BI956655.1|BI956655 HVSMEn0004J17f Hordeum vulgare rachi... 38 0.025
gb|BQ468862.1|BQ468862 HM02J12r HM Hordeum vulgare subsp. v... 39 0.040
gb|BI959759.1|BI959759 HVSMEn0021E23f Hordeum vulgare rachi... 29 0.041
gb|BQ463225.1|BQ463225 HI04G24r HI Hordeum vulgare subsp. v... 26 0.046
gb|BG300823.2|BG300823 HVSMEb0018I18f Hordeum vulgare seedl... 38 0.055
gb|BG343593.2|BG343593 HVSMEg0006H17f Hordeum vulgare pre-a... 38 0.055
gb|BJ464413.1|BJ464413 BJ464413 K. Sato unpublished cDNA li... 38 0.055
gb|BJ466817.1|BJ466817 BJ466817 K. Sato unpublished cDNA li... 38 0.055
gb|BM372926.2|BM372926 EBma04_SQ002_G18_R maternal, 10 DPA,... 38 0.055
gb|BQ764901.1|BQ764901 EBca01_SQ005_P03_R carpel, pre-anthe... 38 0.055
gb|BU976866.1|BU976866 HA10H07r HA Hordeum vulgare subsp. v... 38 0.055
gb|BU976867.1|BU976867 HA10H07u HA Hordeum vulgare subsp. v... 38 0.055
gb|CB881000.1|CB881000 HM08H15w HM Hordeum vulgare subsp. v... 38 0.055
gb|AL505912.1|AL505912 AL505912 Hordeum vulgare Barke roots... 28 0.056
gb|BI956747.1|BI956747 HVSMEn0005B17f Hordeum vulgare rachi... 28 0.073
gb|BG343155.2|BG343155 HVSMEg0002N12f Hordeum vulgare pre-a... 30 0.074
gb|BM817203.1|BM817203 HC03F09_T3.ab1 HC Hordeum vulgare su... 28 0.074
gb|BG367758.2|BG367758 HVSMEi0013I23f Hordeum vulgare 20 DA... 28 0.074
gb|CK123717.1|CK123717 BES1824105c20 BES1824 Hordeum vulgar... 28 0.075
gb|CA030235.1|CA030235 HX06H15r HX Hordeum vulgare subsp. v... 30 0.075
gb|AV913841.1|AV913841 AV913841 K. Sato unpublished cDNA li... 28 0.075
gb|CA008746.1|CA008746 HU11P10r HU Hordeum vulgare subsp. v... 28 0.075
gb|BU994396.1|BU994396 HM06O22r HM Hordeum vulgare subsp. v... 28 0.075
gb|AL503755.1|AL503755 AL503755 Hordeum vulgare Barke roots... 28 0.075
gb|AV924991.1|AV924991 AV924991 K. Sato unpublished cDNA li... 30 0.075
gb|AV913536.1|AV913536 AV913536 K. Sato unpublished cDNA li... 28 0.075
gb|BJ549243.1|BJ549243 BJ549243 K. Sato unpublished cDNA li... 28 0.075
gb|AV834193.1|AV834193 AV834193 K. Sato unpublished cDNA li... 38 0.075
gb|CA006830.1|CA006830 HU05N04r HU Hordeum vulgare subsp. v... 28 0.076
gb|AV925013.1|AV925013 AV925013 K. Sato unpublished cDNA li... 30 0.076
gb|BQ458627.1|BQ458627 HA04K19r HA Hordeum vulgare subsp. v... 28 0.076
gb|CA025338.1|CA025338 HZ51N12r HZ Hordeum vulgare subsp. v... 28 0.076
gb|BE519721.1|BE519721 HV_CEb0018M20f Hordeum vulgare seedl... 28 0.076
gb|BU993949.1|BU993949 HM05B13r HM Hordeum vulgare subsp. v... 28 0.076
gb|BM368405.2|BM368405 EBem08_SQ002_C01_R embryo, 40 DPA, n... 28 0.076
gb|AJ463600.1|AJ463600 AJ463600 S00002 Hordeum vulgare subs... 28 0.077
gb|CA021570.1|CA021570 HZ40H16r HZ Hordeum vulgare subsp. v... 28 0.077
gb|BQ768237.1|BQ768237 EBro08_SQ011_K03_R root, 3 week, dro... 28 0.077
gb|CA007816.1|CA007816 HU09B12r HU Hordeum vulgare subsp. v... 28 0.077
gb|CK124940.1|CK124940 BES1824111A2b07 BES1824 Hordeum vulg... 28 0.077
gb|AL505137.1|AL505137 AL505137 Hordeum vulgare Barke roots... 28 0.10
gb|BF627459.2|BF627459 HVSMEb0004O16f Hordeum vulgare seedl... 37 0.10
gb|BG309191.1|BG309191 HVSMEc0004M06f Hordeum vulgare seedl... 37 0.10
gb|BI956558.1|BI956558 HVSMEn0004C04f Hordeum vulgare rachi... 29 0.12
gb|BI947637.1|BI947637 HVSMEl0006D09f Hordeum vulgare spike... 37 0.14
gb|BI952395.1|BI952395 HVSMEm0006D09f Hordeum vulgare green... 37 0.14
gb|BI952556.1|BI952556 HVSMEm0006P01f Hordeum vulgare green... 37 0.14
gb|BI957924.1|BI957924 HVSMEn0012D09f Hordeum vulgare rachi... 37 0.14
gb|BE214460.3|BE214460 HV_CEb0003I09f Hordeum vulgare seedl... 37 0.14
gb|BQ468760.1|BQ468760 HM02D23r HM Hordeum vulgare subsp. v... 37 0.14
gb|BU974346.1|BU974346 HB27K07r BC Hordeum vulgare subsp. v... 37 0.14
gb|BU994029.1|BU994029 HM05H03r HM Hordeum vulgare subsp. v... 37 0.14
gb|BU998485.1|BU998485 HI11D12r HI Hordeum vulgare subsp. v... 37 0.14
gb|CB859675.1|CB859675 HI11D12w HI Hordeum vulgare subsp. v... 37 0.14
gb|CB878869.1|CB878869 HP10B13T HP Hordeum vulgare subsp. v... 37 0.14
gb|CB880684.1|CB880684 HM07H03w HM Hordeum vulgare subsp. v... 37 0.14
gb|BG416383.2|BG416383 HVSMEk0011O16f Hordeum vulgare testa... 28 0.18
gb|BE519695.1|BE519695 HV_CEb0018I12f Hordeum vulgare seedl... 31 0.19
gb|BF619909.2|BF619909 HVSMEc0009K12f Hordeum vulgare seedl... 36 0.20
gb|BE214055.2|BE214055 HV_CEb0002A22f Hordeum vulgare seedl... 28 0.22
gb|BG343722.1|BG343722 HVSMEg0006J05f Hordeum vulgare pre-a... 25 0.23
gb|BQ763891.1|BQ763891 EBro03_SQ005_N16_R root, 3 week, wat... 29 0.25
gb|BJ446894.1|BJ446894 BJ446894 K. Sato unpublished cDNA li... 27 0.25
gb|BQ760651.1|BQ760651 EBro03_SQ003_B13_R root, 3 week, wat... 30 0.25
gb|CV057314.1|CV057314 BNEL26d5 Barley EST endosperm librar... 36 0.27
gb|BE421257.1|BE421257 HWM007.D10 ITEC HWM Barley Leaf Libr... 35 0.37
gb|BF256515.2|BF256515 HVSMEf0010D07f Hordeum vulgare seedl... 35 0.37
gb|BF257815.2|BF257815 HVSMEf0013O15f Hordeum vulgare seedl... 35 0.37
gb|BG367783.1|BG367783 HVSMEi0013K12f Hordeum vulgare 20 DA... 35 0.37
gb|BI954935.1|BI954935 HVSMEm0020H24f Hordeum vulgare green... 35 0.37
gb|BE215705.1|BE215705 HV_CEb0008E08f Hordeum vulgare seedl... 35 0.37
gb|BE216245.1|BE216245 HV_CEb0009P13f Hordeum vulgare seedl... 35 0.37
gb|BG415526.1|BG415526 HVSMEk0006N09f Hordeum vulgare testa... 35 0.37
gb|BG300486.2|BG300486 HVSMEb0017D18f Hordeum vulgare seedl... 35 0.37
gb|BF256288.3|BF256288 HVSMEf0009M02f Hordeum vulgare seedl... 35 0.37
gb|BF260321.3|BF260321 HVSMEf0021L01f Hordeum vulgare seedl... 35 0.37
gb|BF260459.3|BF260459 HVSMEf0022A19f Hordeum vulgare seedl... 35 0.37
gb|BG343281.2|BG343281 HVSMEg0005E22f Hordeum vulgare pre-a... 35 0.37
gb|BE193517.3|BE193517 HVSMEh0081G15f Hordeum vulgare 5-45 ... 35 0.37
gb|BM816052.1|BM816052 HB01D09_T3.ab1 HB Hordeum vulgare su... 35 0.37
gb|BM817088.1|BM817088 HC110D10_T3.ab1 HC Hordeum vulgare s... 35 0.37
gb|BQ458611.1|BQ458611 HA04L17r HA Hordeum vulgare subsp. v... 35 0.37
gb|BQ459408.1|BQ459408 HA01C16r HA Hordeum vulgare subsp. v... 35 0.37
gb|BQ466076.1|BQ466076 HT01I04T HT Hordeum vulgare subsp. v... 35 0.37
gb|BQ466838.1|BQ466838 HS01L21T HS Hordeum vulgare subsp. v... 35 0.37
gb|BQ467138.1|BQ467138 HS02L21r HS Hordeum vulgare subsp. v... 35 0.37
gb|BU982647.1|BU982647 HA27D01r HA Hordeum vulgare subsp. v... 35 0.37
gb|CA003308.1|CA003308 HS14A09r HS Hordeum vulgare subsp. v... 35 0.37
gb|CV053591.1|CV053591 BNEL101a10 Barley EST endosperm libr... 35 0.37
gb|CV054709.1|CV054709 BNEL112d7 Barley EST endosperm libra... 35 0.37
gb|CV057863.1|CV057863 BNEL31f5 Barley EST endosperm librar... 35 0.37
gb|CV058082.1|CV058082 BNEL34b3 Barley EST endosperm librar... 35 0.37
gb|CV062394.1|CV062394 BNEL79e9 Barley EST endosperm librar... 35 0.37
gb|CV062972.1|CV062972 BNEL85b8 Barley EST endosperm librar... 35 0.37
gb|CV063889.1|CV063889 BNEL94c6 Barley EST endosperm librar... 35 0.37
gb|BI955664.1|BI955664 HVSMEm0023P09f Hordeum vulgare green... 28 0.49
gb|AV925997.1|AV925997 AV925997 K. Sato unpublished cDNA li... 35 0.51
gb|BQ759036.1|BQ759036 EBma07_SQ003_G17_R maternal, 21 DPA,... 32 0.56
gb|BE421311.1|BE421311 HWM008.A04 ITEC HWM Barley Leaf Libr... 26 0.58
gb|BF065323.1|BF065323 HV_CEb0012B24f Hordeum vulgare seedl... 28 0.62
gb|BE215353.2|BE215353 HV_CEb0006J02f Hordeum vulgare seedl... 29 0.68
gb|BF623640.2|BF623640 HVSMEa0003E10f Hordeum vulgare seedl... 35 0.70
gb|BF630643.2|BF630643 HVSMEb0012I18f Hordeum vulgare seedl... 35 0.70
gb|AJ462153.1|AJ462153 AJ462153 S00002 Hordeum vulgare subs... 35 0.70
gb|BJ453994.1|BJ453994 BJ453994 K. Sato unpublished cDNA li... 35 0.70
gb|BU997662.1|BU997662 HI08K07r HI Hordeum vulgare subsp. v... 35 0.70
gb|CB858895.1|CB858895 HI08K07w HI Hordeum vulgare subsp. v... 35 0.70
gb|AJ461561.1|AJ461561 AJ461561 S00002 Hordeum vulgare subs... 23 0.70
gb|CA018202.1|CA018202 HV07O19r HV Hordeum vulgare subsp. v... 31 0.74
gb|CA013755.1|CA013755 HT09G07r HT Hordeum vulgare subsp. v... 27 0.76
gb|BE455107.3|BE455107 HVSMEh0096D11f Hordeum vulgare 5-45 ... 26 0.82
gb|BG367610.2|BG367610 HVSMEi0012O21f Hordeum vulgare 20 DA... 29 0.82
gb|AL504109.1|AL504109 AL504109 Hordeum vulgare Barke roots... 28 0.82
gb|BE558912.1|BE558912 HV_CEb0020M03f Hordeum vulgare seedl... 31 0.86
gb|BF258533.2|BF258533 HVSMEf0015P19f Hordeum vulgare seedl... 29 0.86
gb|BE214259.1|BE214259 HV_CEb0002O12f Hordeum vulgare seedl... 34 0.96
gb|BG310307.2|BG310307 HVSMEc0017I13f Hordeum vulgare seedl... 34 0.96
gb|BF260051.3|BF260051 HVSMEf0020P16f Hordeum vulgare seedl... 34 0.96
gb|AV917455.1|AV917455 AV917455 K. Sato unpublished cDNA li... 34 0.96
gb|BI779476.2|BI779476 EBro01_SQ004_C17_R root, 3 week, hyd... 34 0.96
gb|BQ762907.1|BQ762907 EBro02_SQ006_B15_R root, 3 week, hyd... 34 0.96
gb|BU975843.1|BU975843 HB32H15r BC Hordeum vulgare subsp. v... 34 0.96
gb|CA018753.1|CA018753 HV09I23r HV Hordeum vulgare subsp. v... 34 0.96
emb|Z23131.1|HVPRX6GNA H.vulgare prx6 gene, complete CDS 34 0.96
gb|BI780280.2|BI780280 EBem06_SQ001_B05_R embryo, 21 DPA, n... 31 1.0
gb|BE193923.3|BE193923 HVSMEh0082O11f Hordeum vulgare 5-45 ... 26 1.1
emb|AJ291295.1|HVU291295 Hordeum vulgare mRNA for cold-regu... 26 1.1
gb|BG299564.2|BG299564 HVSMEa0020M14f Hordeum vulgare seedl... 26 1.1
gb|BQ466758.1|BQ466758 HS01H23T HS Hordeum vulgare subsp. v... 26 1.1
gb|CB878454.1|CB878454 HP08J15T HP Hordeum vulgare subsp. v... 26 1.1
gb|BQ463589.1|BQ463589 HI05M23r HI Hordeum vulgare subsp. v... 26 1.1
gb|CB878365.1|CB878365 HP08E15T HP Hordeum vulgare subsp. v... 26 1.1
gb|CB878457.1|CB878457 HP08J18T HP Hordeum vulgare subsp. v... 26 1.1
gb|BQ469235.1|BQ469235 HM03M19r HM Hordeum vulgare subsp. v... 26 1.1
gb|CA018536.1|CA018536 HV08O15r HV Hordeum vulgare subsp. v... 26 1.1
gb|BI780363.2|BI780363 EBem06_SQ001_J02_R embryo, 21 DPA, n... 26 1.1
gb|CA002228.1|CA002228 HS06O05r HS Hordeum vulgare subsp. v... 26 1.1
gb|BE559155.2|BE559155 HV_CEb0023L06f Hordeum vulgare seedl... 29 1.2
gb|BM369923.2|BM369923 EBem07_SQ004_P22_R embryo, 28 DPA, n... 26 1.2
gb|BI949145.1|BI949145 HVSMEl0012I19f Hordeum vulgare spike... 29 1.2
gb|BE558385.2|BE558385 HV_CEb0017H10f Hordeum vulgare seedl... 29 1.2
gb|CA024260.1|CA024260 HZ48N01r HZ Hordeum vulgare subsp. v... 31 1.2
gb|BF266823.2|BF266823 HV_CEa0016C15f Hordeum vulgare seedl... 29 1.2
gb|BF261805.2|BF261805 HV_CEa0002E10f Hordeum vulgare seedl... 29 1.2
gb|BI958786.1|BI958786 HVSMEn0016J16f Hordeum vulgare rachi... 28 1.2
gb|BE216369.2|BE216369 HV_CEb0010F01f Hordeum vulgare seedl... 29 1.3
gb|BQ763523.1|BQ763523 EBro02_SQ008_N15_R root, 3 week, hyd... 31 1.3
gb|AL507655.1|AL507655 AL507655 Hordeum vulgare Barke devel... 34 1.3
gb|BE454379.1|BE454379 HVSMEh0093O14f Hordeum vulgare 5-45 ... 34 1.3
gb|BI959291.1|BI959291 HVSMEn0019C01f Hordeum vulgare rachi... 34 1.3
gb|BQ460072.1|BQ460072 HA07E16r HA Hordeum vulgare subsp. v... 34 1.3
gb|BQ468818.1|BQ468818 HM02G24r HM Hordeum vulgare subsp. v... 34 1.3
gb|BM443133.2|BM443133 EBro02_SQ002_L10_R root, 3 week, hyd... 34 1.3
gb|CA004669.1|CA004669 HS18F07r HS Hordeum vulgare subsp. v... 34 1.3
gb|CA018451.1|CA018451 HV08K14r HV Hordeum vulgare subsp. v... 34 1.3
gb|CB858613.1|CB858613 HI07L05w HI Hordeum vulgare subsp. v... 34 1.3
gb|CA032180.1|CA032180 HX12E07r HX Hordeum vulgare subsp. v... 30 1.3
gb|BI957135.1|BI957135 HVSMEn0007K22f Hordeum vulgare rachi... 26 1.4
gb|BG343835.2|BG343835 HVSMEg0006O03f Hordeum vulgare pre-a... 27 1.5
gb|BG414400.2|BG414400 HVSMEk0002B08f Hordeum vulgare testa... 26 1.5
gb|AV926426.1|AV926426 AV926426 K. Sato unpublished cDNA li... 30 1.5
gb|BF064845.3|BF064845 HV_CEb0019O17f Hordeum vulgare seedl... 27 1.5
gb|AL505149.1|AL505149 AL505149 Hordeum vulgare Barke roots... 27 1.5
gb|BE411476.1|BE411476 ISC006.A05F990623 ITEC ISC Barley Le... 25 1.5
gb|BE411834.1|BE411834 ISC009.G05F990816 ITEC ISC Barley Le... 25 1.5
gb|BQ463208.1|BQ463208 HI04M06r HI Hordeum vulgare subsp. v... 28 1.6
gb|BI960540.1|BI960540 HVSMEn0024P11f Hordeum vulgare rachi... 24 1.6
gb|BI954459.1|BI954459 HVSMEm0018A18f Hordeum vulgare green... 24 1.6
gb|BI958092.1|BI958092 HVSMEn0013F05f Hordeum vulgare rachi... 31 1.6
gb|AJ434528.1|AJ434528 AJ434528 S00002 Hordeum vulgare subs... 30 1.7
gb|BQ766535.1|BQ766535 EBro08_SQ006_J09_R root, 3 week, dro... 28 1.7
gb|BM098782.2|BM098782 EBpi05_SQ002_A18_R pistil, 8 DPA, no... 30 1.8
gb|BM101189.2|BM101189 EBpi01_SQ003_C11_R pistil, 1 DPA, no... 30 1.8
gb|AL509011.1|AL509011 AL509011 Hordeum vulgare Barke devel... 33 1.8
gb|AV832695.1|AV832695 AV832695 K. Sato unpublished cDNA li... 33 1.8
gb|BF627831.2|BF627831 HVSMEb0005O17f Hordeum vulgare seedl... 33 1.8
gb|BF253544.2|BF253544 HVSMEf0001D16f Hordeum vulgare seedl... 33 1.8
gb|BI949401.1|BI949401 HVSMEl0013L12f Hordeum vulgare spike... 33 1.8
gb|BI952084.1|BI952084 HVSMEm0004J01f Hordeum vulgare green... 33 1.8
gb|BI957611.1|BI957611 HVSMEn0010F21f Hordeum vulgare rachi... 33 1.8
gb|BF263945.2|BF263945 HV_CEa0008B23f Hordeum vulgare seedl... 33 1.8
gb|BE214291.2|BE214291 HV_CEb0003A09f Hordeum vulgare seedl... 33 1.8
gb|BE215906.2|BE215906 HV_CEb0008M23f Hordeum vulgare seedl... 33 1.8
gb|BI958629.1|BI958629 HVSMEn0016A02f Hordeum vulgare rachi... 33 1.8
gb|BJ473038.1|BJ473038 BJ473038 K. Sato unpublished cDNA li... 33 1.8
gb|BQ467215.1|BQ467215 HS03A16r HS Hordeum vulgare subsp. v... 33 1.8
gb|BM443268.2|BM443268 EBro02_SQ003_F15_R root, 3 week, hyd... 33 1.8
gb|BU983515.1|BU983515 HA29P18r HA Hordeum vulgare subsp. v... 33 1.8
gb|BU996227.1|BU996227 HM12O18r HM Hordeum vulgare subsp. v... 33 1.8
gb|CB879462.1|CB879462 HP02F16w HP Hordeum vulgare subsp. v... 33 1.8
gb|CK122110.1|CK122110 BES1824101h12 BES1824 Hordeum vulgar... 33 1.8
gb|CK122651.1|CK122651 BES1824104o18 BES1824 Hordeum vulgar... 33 1.8
gb|CK122767.1|CK122767 BES1824105l08 BES1824 Hordeum vulgar... 33 1.8
gb|CA008315.1|CA008315 HU10J08r HU Hordeum vulgare subsp. v... 30 1.8
gb|AV914745.1|AV914745 AV914745 K. Sato unpublished cDNA li... 30 1.9
gb|BJ464444.1|BJ464444 BJ464444 K. Sato unpublished cDNA li... 30 1.9
gb|AV915509.1|AV915509 AV915509 K. Sato unpublished cDNA li... 30 1.9
gb|BM369028.2|BM369028 EBem07_SQ002_F14_R embryo, 28 DPA, n... 30 1.9
gb|BI947080.1|BI947080 HVSMEl0003J03f Hordeum vulgare spike... 26 1.9
gb|BU980787.1|BU980787 HA21L04r HA Hordeum vulgare subsp. v... 30 1.9
gb|BF631136.2|BF631136 HVSMEb0015B07f Hordeum vulgare seedl... 24 1.9
gb|BQ471657.1|BQ471657 HV03B06r HV Hordeum vulgare subsp. v... 26 2.0
gb|BE196148.3|BE196148 HVSMEh0091H22f Hordeum vulgare 5-45 ... 26 2.0
gb|BF623084.2|BF623084 HVSMEa0014B24f Hordeum vulgare seedl... 26 2.0
gb|BI956668.1|BI956668 HVSMEn0004K20f Hordeum vulgare rachi... 27 2.0
gb|BF631596.2|BF631596 HVSMEb0016I20f Hordeum vulgare seedl... 28 2.0
gb|BU986674.1|BU986674 HF12J10r HF Hordeum vulgare subsp. v... 30 2.0
gb|BG418860.2|BG418860 HVSMEk0024M23f Hordeum vulgare testa... 26 2.0
gb|BF625336.2|BF625336 HVSMEa0008I03f Hordeum vulgare seedl... 26 2.0
gb|BI955996.1|BI955996 HVSMEm0025F04f Hordeum vulgare green... 26 2.0
gb|BE196340.3|BE196340 HVSMEh0092A14f Hordeum vulgare 5-45 ... 26 2.0
gb|BF623078.3|BF623078 HVSMEa0014B12f Hordeum vulgare seedl... 26 2.0
gb|BF623080.3|BF623080 HVSMEa0014B16f Hordeum vulgare seedl... 26 2.0
gb|BF625673.2|BF625673 HVSMEa0013D09f Hordeum vulgare seedl... 25 2.1
gb|AV926419.1|AV926419 AV926419 K. Sato unpublished cDNA li... 30 2.1
gb|AV926420.1|AV926420 AV926420 K. Sato unpublished cDNA li... 30 2.1
gb|CA008208.1|CA008208 HU10D23r HU Hordeum vulgare subsp. v... 30 2.1
gb|CA004496.1|CA004496 HS17M14r HS Hordeum vulgare subsp. v... 25 2.1
gb|BQ459163.1|BQ459163 HA02C02r HA Hordeum vulgare subsp. v... 30 2.1
gb|CA004639.1|CA004639 HS18D19r HS Hordeum vulgare subsp. v... 25 2.1
gb|CA006983.1|CA006983 HU06F12r HU Hordeum vulgare subsp. v... 30 2.1
gb|BI957867.1|BI957867 HVSMEn0011N06f Hordeum vulgare rachi... 28 2.2
gb|BQ765140.1|BQ765140 EBca01_SQ005_L23_R carpel, pre-anthe... 30 2.3
gb|BI958951.1|BI958951 HVSMEn0017G09f Hordeum vulgare rachi... 26 2.3
gb|CK122454.1|CK122454 BES1824103i21 BES1824 Hordeum vulgar... 30 2.3
gb|BE602855.2|BE602855 HVSMEh0100D19f Hordeum vulgare 5-45 ... 26 2.4
gb|BI958052.1|BI958052 HVSMEn0013B21f Hordeum vulgare rachi... 28 2.4
gb|AL504380.1|AL504380 AL504380 Hordeum vulgare Barke roots... 30 2.4
gb|BE559056.1|BE559056 HV_CEb0022I18f Hordeum vulgare seedl... 29 2.4
gb|AL509080.1|AL509080 AL509080 Hordeum vulgare Barke devel... 27 2.4
gb|BQ470459.1|BQ470459 HX03A19r HX Hordeum vulgare subsp. v... 31 2.4
gb|CV053878.1|CV053878 BNEL104b9 Barley EST endosperm libra... 30 2.5
gb|AL501295.1|AL501295 AL501295 Hordeum vulgare Barke roots... 33 2.5
gb|AL501296.1|AL501296 AL501296 Hordeum vulgare Barke roots... 33 2.5
gb|AL503358.1|AL503358 AL503358 Hordeum vulgare Barke roots... 33 2.5
gb|AL504450.1|AL504450 AL504450 Hordeum vulgare Barke roots... 33 2.5
gb|AL505492.1|AL505492 AL505492 Hordeum vulgare Barke roots... 33 2.5
gb|AL508213.1|AL508213 AL508213 Hordeum vulgare Barke devel... 33 2.5
gb|AV834083.1|AV834083 AV834083 K. Sato unpublished cDNA li... 33 2.5
gb|BF622095.2|BF622095 HVSMEa0001L23f Hordeum vulgare seedl... 33 2.5
gb|BF625446.2|BF625446 HVSMEa0009D12f Hordeum vulgare seedl... 33 2.5
gb|BF628601.2|BF628601 HVSMEb0006L12f Hordeum vulgare seedl... 33 2.5
gb|BE195736.2|BE195736 HVSMEh0090F03f Hordeum vulgare 5-45 ... 33 2.5
gb|BI948129.1|BI948129 HVSMEl0008E21f Hordeum vulgare spike... 33 2.5
gb|BI953916.1|BI953916 HVSMEm0015F18f Hordeum vulgare green... 33 2.5
gb|BI956477.1|BI956477 HVSMEn0003K01f Hordeum vulgare rachi... 33 2.5
gb|BE558704.1|BE558704 HV_CEb0020C01f Hordeum vulgare seedl... 33 2.5
gb|BE558848.1|BE558848 HV_CEb0020I24f Hordeum vulgare seedl... 33 2.5
gb|BF267117.2|BF267117 HV_CEa0017A02f Hordeum vulgare seedl... 33 2.5
gb|BI960177.1|BI960177 HVSMEn0023I20f Hordeum vulgare rachi... 33 2.5
gb|BF265417.3|BF265417 HV_CEa0012D07f Hordeum vulgare seedl... 33 2.5
gb|BM817234.1|BM817234 HC111B03_T3.ab1 HC Hordeum vulgare s... 33 2.5
gb|BJ451005.1|BJ451005 BJ451005 K. Sato unpublished cDNA li... 33 2.5
gb|BQ461082.1|BQ461082 HE01E13r HE Hordeum vulgare subsp. v... 33 2.5
gb|BQ461161.1|BQ461161 HE01A13r HE Hordeum vulgare subsp. v... 33 2.5
gb|BQ463463.1|BQ463463 HI05F16r HI Hordeum vulgare subsp. v... 33 2.5
gb|BQ467254.1|BQ467254 HS03C17r HS Hordeum vulgare subsp. v... 33 2.5
gb|BQ467775.1|BQ467775 HS04N18r HS Hordeum vulgare subsp. v... 33 2.5
gb|BQ469541.1|BQ469541 HZ01B20r HZ Hordeum vulgare subsp. v... 33 2.5
gb|BM441966.2|BM441966 EBan01_SQ001_D04_R anther, yellow st... 33 2.5
gb|BM099228.2|BM099228 EBes01_SQ002_J18_R embryo sac, 4-6 D... 33 2.5
gb|BM374178.2|BM374178 EBma03_SQ003_N24_R maternal, 8 DPA, ... 33 2.5
gb|BI779361.2|BI779361 EBro01_SQ003_M15_R root, 3 week, hyd... 33 2.5
gb|BI777268.2|BI777268 EBro03_SQ002_K16_R root, 3 week, wat... 33 2.5
gb|BM372269.2|BM372269 EBro03_SQ004_H19_R root, 3 week, wat... 33 2.5
gb|BM370994.2|BM370994 EBro04_SQ003_C16_R root, 3 week, sal... 33 2.5
gb|BM370366.2|BM370366 EBro08_SQ003_P22_R root, 3 week, dro... 33 2.5
gb|BM370470.2|BM370470 EBro08_SQ004_F07_R root, 3 week, dro... 33 2.5
gb|BQ753436.1|BQ753436 EBan01_SQ004_E07_R anther, yellow st... 33 2.5
gb|BQ759761.1|BQ759761 EBpi05_SQ004_G08_R pistil, 8 DPA, no... 33 2.5
gb|BQ764463.1|BQ764463 EBan01_SQ005_N21_R anther, yellow st... 33 2.5
gb|BQ764657.1|BQ764657 EBca01_SQ004_D14_R carpel, pre-anthe... 33 2.5
gb|BQ766763.1|BQ766763 EBro08_SQ007_E06_R root, 3 week, dro... 33 2.5
gb|BQ768316.1|BQ768316 EBro08_SQ011_J08_R root, 3 week, dro... 33 2.5
gb|BU977663.1|BU977663 HA11N06r HA Hordeum vulgare subsp. v... 33 2.5
gb|BU994687.1|BU994687 HM07N17r HM Hordeum vulgare subsp. v... 33 2.5
gb|BU998672.1|BU998672 HI11M24r HI Hordeum vulgare subsp. v... 33 2.5
gb|CA007031.1|CA007031 HU06H22r HU Hordeum vulgare subsp. v... 33 2.5
gb|CA019644.1|CA019644 HV12K11r HV Hordeum vulgare subsp. v... 33 2.5
gb|CA024433.1|CA024433 HZ49E20r HZ Hordeum vulgare subsp. v... 33 2.5
gb|CA028095.1|CA028095 HZ60P16r HZ Hordeum vulgare subsp. v... 33 2.5
gb|CA031843.1|CA031843 HX11E16r HX Hordeum vulgare subsp. v... 33 2.5
gb|CB878032.1|CB878032 HP07B15T HP Hordeum vulgare subsp. v... 33 2.5
gb|CB883654.1|CB883654 HQ02O06w HQ Hordeum vulgare subsp. v... 33 2.5
gb|CK123514.1|CK123514 BES1824104e07 BES1824 Hordeum vulgar... 33 2.5
gb|CK124477.1|CK124477 BES1824109f03 BES1824 Hordeum vulgar... 33 2.5
gb|BF627587.2|BF627587 HVSMEb0005E04f Hordeum vulgare seedl... 30 2.6
gb|BI951841.1|BI951841 HVSMEm0003C20f Hordeum vulgare green... 24 2.7
gb|BF267165.2|BF267165 HV_CEa0017C08f Hordeum vulgare seedl... 25 2.7
gb|BQ766040.1|BQ766040 EBro03_SQ008_J22_R root, 3 week, wat... 28 2.7
gb|BG417340.2|BG417340 HVSMEk0017J10f Hordeum vulgare testa... 30 2.7
gb|BF261076.2|BF261076 HVSMEf0023L04f Hordeum vulgare seedl... 30 2.7
gb|CV056502.1|CV056502 BNEL18D8 Barley EST endosperm librar... 28 2.8
gb|BG299884.1|BG299884 HVSMEa0022F10f Hordeum vulgare seedl... 30 2.8
gb|BM370799.2|BM370799 EBro04_SQ002_E17_R root, 3 week, sal... 26 2.8
gb|BF264661.3|BF264661 HV_CEa0010A10f Hordeum vulgare seedl... 26 2.8
gb|BF621392.1|BF621392 HVSMEa0006M08f Hordeum vulgare seedl... 30 2.9
gb|AL508656.1|AL508656 AL508656 Hordeum vulgare Barke devel... 26 2.9
gb|BI958125.1|BI958125 HVSMEn0013H22f Hordeum vulgare rachi... 28 3.1
gb|CA002389.1|CA002389 HS07F14r HS Hordeum vulgare subsp. v... 29 3.2
gb|AL507860.1|AL507860 AL507860 Hordeum vulgare Barke devel... 26 3.3
gb|BE558520.2|BE558520 HV_CEb0018D03f Hordeum vulgare seedl... 27 3.3
gb|CA030469.1|CA030469 HX07C13r HX Hordeum vulgare subsp. v... 29 3.3
gb|CV057332.1|CV057332 BNEL26f2 Barley EST endosperm librar... 26 3.4
gb|CV059844.1|CV059844 BNEL51e8 Barley EST endosperm librar... 26 3.4
gb|AL504149.1|AL504149 AL504149 Hordeum vulgare Barke roots... 32 3.4
gb|AL507292.1|AL507292 AL507292 Hordeum vulgare Barke devel... 32 3.4
gb|AL509190.1|AL509190 AL509190 Hordeum vulgare Barke devel... 32 3.4
gb|BF625129.2|BF625129 HVSMEa0005O18f Hordeum vulgare seedl... 32 3.4
gb|BF625803.2|BF625803 HVSMEa0013K16f Hordeum vulgare seedl... 32 3.4
gb|BF630051.2|BF630051 HVSMEb0007M16f Hordeum vulgare seedl... 32 3.4
gb|BG300474.1|BG300474 HVSMEb0017D05f Hordeum vulgare seedl... 32 3.4
gb|BF258154.2|BF258154 HVSMEf0014P03f Hordeum vulgare seedl... 32 3.4
gb|BE454743.2|BE454743 HVSMEh0095K18f Hordeum vulgare 5-45 ... 32 3.4
gb|BI951526.1|BI951526 HVSMEm0001E04f Hordeum vulgare green... 32 3.4
gb|BI952931.1|BI952931 HVSMEm0008H23f Hordeum vulgare green... 32 3.4
gb|BI954720.1|BI954720 HVSMEm0019G22f Hordeum vulgare green... 32 3.4
gb|BI956931.1|BI956931 HVSMEn0006C13f Hordeum vulgare rachi... 32 3.4
gb|BE215583.1|BE215583 HV_CEb0008D06f Hordeum vulgare seedl... 32 3.4
gb|BI959252.1|BI959252 HVSMEn0018O16f Hordeum vulgare rachi... 32 3.4
gb|BI959990.1|BI959990 HVSMEn0022M08f Hordeum vulgare rachi... 32 3.4
gb|AW982677.3|AW982677 HVSMEg0003O15f Hordeum vulgare pre-a... 32 3.4
gb|BE601978.3|BE601978 HVSMEh0100L14f Hordeum vulgare 5-45 ... 32 3.4
gb|BU996542.1|BU996542 HM13P04r HM Hordeum vulgare subsp. v... 32 3.4
gb|CA002802.1|CA002802 HS08J06r HS Hordeum vulgare subsp. v... 32 3.4
gb|CA025214.1|CA025214 HZ51I12r HZ Hordeum vulgare subsp. v... 32 3.4
gb|CA032238.1|CA032238 HX12H01r HX Hordeum vulgare subsp. v... 32 3.4
gb|CB883075.1|CB883075 HQ01B22w HQ Hordeum vulgare subsp. v... 32 3.4
gb|CV063647.1|CV063647 BNEL91f5 Barley EST endosperm librar... 32 3.4
gb|CV063652.1|CV063652 BNEL91g1 Barley EST endosperm librar... 32 3.4
gb|BE193523.2|BE193523 HVSMEh0081G21f Hordeum vulgare 5-45 ... 30 3.4
gb|BF628030.3|BF628030 HVSMEb0002N07f Hordeum vulgare seedl... 24 3.6
gb|BF627312.2|BF627312 HVSMEb0004I10f Hordeum vulgare seedl... 26 3.6
gb|BF628484.2|BF628484 HVSMEb0006D21f Hordeum vulgare seedl... 27 3.6
gb|BE558378.3|BE558378 HV_CEb0017H03f Hordeum vulgare seedl... 27 3.7
gb|BF258917.2|BF258917 HVSMEf0017A24f Hordeum vulgare seedl... 27 3.7
gb|CK124793.1|CK124793 BES1824110g16 BES1824 Hordeum vulgar... 26 3.8
gb|CA030015.1|CA030015 HX05N13r HX Hordeum vulgare subsp. v... 29 4.0
gb|BI953282.1|BI953282 HVSMEm0012A02f Hordeum vulgare green... 27 4.0
gb|BF259824.3|BF259824 HVSMEf0020F20f Hordeum vulgare seedl... 28 4.0
gb|BE196466.3|BE196466 HVSMEh0092F23f Hordeum vulgare 5-45 ... 30 4.1
gb|BM100698.2|BM100698 EBma01_SQ005_P15_R maternal, 4 DPA, ... 27 4.5
gb|AL505241.1|AL505241 AL505241 Hordeum vulgare Barke roots... 32 4.7
gb|AL506478.1|AL506478 AL506478 Hordeum vulgare Barke devel... 32 4.7
gb|BE603281.1|BE603281 HVSMEh0102P09f Hordeum vulgare 5-45 ... 32 4.7
gb|BF616701.2|BF616701 HVSMEc0012E04f Hordeum vulgare seedl... 32 4.7
gb|BF617374.2|BF617374 HVSMEc0017A10f Hordeum vulgare seedl... 32 4.7
gb|BF254610.2|BF254610 HVSMEf0004I03f Hordeum vulgare seedl... 32 4.7
gb|BF255398.2|BF255398 HVSMEf0006M01f Hordeum vulgare seedl... 32 4.7
gb|BF256803.2|BF256803 HVSMEf0011A22f Hordeum vulgare seedl... 32 4.7
gb|BE195104.2|BE195104 HVSMEh0088E22f Hordeum vulgare 5-45 ... 32 4.7
gb|BI949869.1|BI949869 HVSMEl0016J10f Hordeum vulgare spike... 32 4.7
gb|BI952197.1|BI952197 HVSMEm0004P10f Hordeum vulgare green... 32 4.7
gb|BE214349.1|BE214349 HV_CEb0003D01f Hordeum vulgare seedl... 32 4.7
gb|BE216688.1|BE216688 HV_CEb0011D15f Hordeum vulgare seedl... 32 4.7
gb|BE559348.1|BE559348 HV_CEb0024D17f Hordeum vulgare seedl... 32 4.7
gb|BF261840.2|BF261840 HV_CEa0002F21f Hordeum vulgare seedl... 32 4.7
gb|BF627782.3|BF627782 HVSMEb0005M15f Hordeum vulgare seedl... 32 4.7
gb|BF268087.3|BF268087 HV_CEa0019N05f Hordeum vulgare seedl... 32 4.7
gb|BE215437.2|BE215437 HV_CEb0006M18f Hordeum vulgare seedl... 32 4.7
gb|AV923717.1|AV923717 AV923717 K. Sato unpublished cDNA li... 32 4.7
gb|BM444314.1|BM444314 EBem09_SQ004_M19_R embryo, 1 Day ger... 32 4.7
gb|BM816689.1|BM816689 HB01E02_T3.ab1 HB Hordeum vulgare su... 32 4.7
gb|BJ447482.1|BJ447482 BJ447482 K. Sato unpublished cDNA li... 32 4.7
gb|BJ453594.1|BJ453594 BJ453594 K. Sato unpublished cDNA li... 32 4.7
gb|BJ455243.1|BJ455243 BJ455243 K. Sato unpublished cDNA li... 32 4.7
gb|BJ459689.1|BJ459689 BJ459689 K. Sato unpublished cDNA li... 32 4.7
gb|BJ461136.1|BJ461136 BJ461136 K. Sato unpublished cDNA li... 32 4.7
gb|BQ465422.1|BQ465422 HU03J17r HU Hordeum vulgare subsp. v... 32 4.7
gb|BQ467514.1|BQ467514 HS04A11r HS Hordeum vulgare subsp. v... 32 4.7
gb|BQ661377.1|BQ661377 HM03D19u HM Hordeum vulgare subsp. v... 32 4.7
gb|BQ662216.1|BQ662216 HS01B24w HS Hordeum vulgare subsp. v... 32 4.7
gb|BQ740044.1|BQ740044 HC04A08 HC Hordeum vulgare subsp. vu... 32 4.7
gb|BM377711.2|BM377711 EBem04_SQ003_P06_R embryo, 12 DPA, n... 32 4.7
gb|BM372187.2|BM372187 EBro03_SQ004_E08_R root, 3 week, wat... 32 4.7
gb|BQ755028.1|BQ755028 EBed02_SQ003_I05_R endosperm, 8 DPA,... 32 4.7
gb|BU985224.1|BU985224 HF06I04r HF Hordeum vulgare subsp. v... 32 4.7
gb|BU987297.1|BU987297 HF14F22r HF Hordeum vulgare subsp. v... 32 4.7
gb|BU997610.1|BU997610 HI08H20r HI Hordeum vulgare subsp. v... 32 4.7
gb|BU997977.1|BU997977 HI09J12r HI Hordeum vulgare subsp. v... 32 4.7
gb|BU999339.1|BU999339 HI14D08r HI Hordeum vulgare subsp. v... 32 4.7
gb|CA000404.1|CA000404 HS08N15u HS Hordeum vulgare subsp. v... 32 4.7
gb|CA003884.1|CA003884 HS15O05r HS Hordeum vulgare subsp. v... 32 4.7
gb|CA004599.1|CA004599 HS18B18r HS Hordeum vulgare subsp. v... 32 4.7
gb|CA013015.1|CA013015 HT07C09r HT Hordeum vulgare subsp. v... 32 4.7
gb|CA013205.1|CA013205 HT07L07r HT Hordeum vulgare subsp. v... 32 4.7
gb|CA017947.1|CA017947 HV06O14r HV Hordeum vulgare subsp. v... 32 4.7
gb|CA019883.1|CA019883 HV13I24r HV Hordeum vulgare subsp. v... 32 4.7
gb|CB883681.1|CB883681 HQ02P13w HQ Hordeum vulgare subsp. v... 32 4.7
gb|CV057864.1|CV057864 BNEL31f6 Barley EST endosperm librar... 32 4.7
gb|CK125132.1|CK125132 BES1824106m16 BES1824 Hordeum vulgar... 32 4.7
gb|CK125709.1|CK125709 BES1824110e07 BES1824 Hordeum vulgar... 32 4.7
gb|M77475.1|BLYSIP1A Hordeum vulgare seed imbitition protei... 32 4.7
emb|X60173.1|HVNAR7 Hordeum vulgare nar7 gene for NAD(P)H-b... 32 4.7
gb|BI954859.1|BI954859 HVSMEm0020B16f Hordeum vulgare green... 24 4.8
gb|BF627177.2|BF627177 HVSMEb0004C11f Hordeum vulgare seedl... 27 4.8
gb|BI947744.1|BI947744 HVSMEl0006L12f Hordeum vulgare spike... 27 4.8
gb|CK122182.1|CK122182 BES1824101p04 BES1824 Hordeum vulgar... 25 4.9
gb|BQ757970.1|BQ757970 EBem10_SQ005_N23_R embryo, 2 Day ger... 24 4.9
gb|CK124554.1|CK124554 BES1824109i11 BES1824 Hordeum vulgar... 24 4.9
gb|AL506913.1|AL506913 AL506913 Hordeum vulgare Barke devel... 24 4.9
gb|AV923524.1|AV923524 AV923524 K. Sato unpublished cDNA li... 24 4.9
gb|BM373402.2|BM373402 EBma04_SQ004_F01_R maternal, 10 DPA,... 24 4.9
gb|CA028338.1|CA028338 HZ61K24r HZ Hordeum vulgare subsp. v... 24 4.9
gb|BU995508.1|BU995508 HM10H11r HM Hordeum vulgare subsp. v... 24 4.9
gb|BQ765081.1|BQ765081 EBca01_SQ005_A24_R carpel, pre-anthe... 24 4.9
gb|BI958558.1|BI958558 HVSMEn0015J22f Hordeum vulgare rachi... 27 4.9
gb|BQ471604.1|BQ471604 HV02O19r HV Hordeum vulgare subsp. v... 24 4.9
gb|BQ765767.1|BQ765767 EBro03_SQ008_I05_R root, 3 week, wat... 24 4.9
gb|BI778599.2|BI778599 EBro07_SQ003_M06_R root, 3 week, red... 24 4.9
gb|CB883177.1|CB883177 HQ01H04w HQ Hordeum vulgare subsp. v... 24 4.9
gb|BU994311.1|BU994311 HM06J18r HM Hordeum vulgare subsp. v... 24 4.9
gb|AL506227.1|AL506227 AL506227 Hordeum vulgare Barke devel... 27 4.9
gb|BM372876.2|BM372876 EBma04_SQ002_D23_R maternal, 10 DPA,... 24 4.9
gb|BU981796.1|BU981796 HA24K15r HA Hordeum vulgare subsp. v... 24 4.9
gb|BQ472240.1|BQ472240 HV04M24r HV Hordeum vulgare subsp. v... 24 5.0
gb|BU989443.1|BU989443 HF21M01r HF Hordeum vulgare subsp. v... 25 5.0
gb|BU977008.1|BU977008 HA10K24r HA Hordeum vulgare subsp. v... 24 5.0
gb|CV054084.1|CV054084 BNEL106e7 Barley EST endosperm libra... 27 5.0
gb|CV058651.1|CV058651 BNEL3D10 Barley EST endosperm librar... 27 5.0
gb|BM375153.2|BM375153 EBem06_SQ002_I08_R embryo, 21 DPA, n... 24 5.0
gb|BQ764720.1|BQ764720 EBca01_SQ004_O14_R carpel, pre-anthe... 24 5.0
gb|BQ766081.1|BQ766081 EBro08_SQ005_A05_R root, 3 week, dro... 27 5.0
gb|BQ765763.1|BQ765763 EBro03_SQ008_I01_R root, 3 week, wat... 24 5.0
gb|CV059782.1|CV059782 BNEL50h5 Barley EST endosperm librar... 27 5.0
gb|CV060116.1|CV060116 BNEL54f12 Barley EST endosperm libra... 27 5.0
gb|CV060871.1|CV060871 BNEL62b7 Barley EST endosperm librar... 27 5.0
gb|BF629816.2|BF629816 HVSMEb0013O22f Hordeum vulgare seedl... 27 5.0
gb|BU981356.1|BU981356 HA23G02r HA Hordeum vulgare subsp. v... 24 5.0
gb|BM096938.2|BM096938 EBpi07_SQ001_N17_R pistil, 12 DPA, n... 26 5.0
gb|CA004306.1|CA004306 HS17D08r HS Hordeum vulgare subsp. v... 24 5.1
gb|CA028836.1|CA028836 HZ63G09r HZ Hordeum vulgare subsp. v... 24 5.1
gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedl... 28 5.1
gb|BF267628.2|BF267628 HV_CEa0018H08f Hordeum vulgare seedl... 24 5.1
gb|CA017437.1|CA017437 HV05D06r HV Hordeum vulgare subsp. v... 24 5.1
gb|CV059869.1|CV059869 BNEL51h1 Barley EST endosperm librar... 29 5.2
gb|BI953458.1|BI953458 HVSMEm0012M10f Hordeum vulgare green... 28 5.4
gb|AF515785.1| Hordeum vulgare subsp. vulgare beta-1,3-gluc... 27 5.4
gb|BU996553.1|BU996553 HM13P17r HM Hordeum vulgare subsp. v... 25 5.4
emb|AJ271367.1|HVU271367 Hordeum vulgare mRNA for beta-1,3-... 27 5.6
gb|BI953728.1|BI953728 HVSMEm0014M18f Hordeum vulgare green... 26 5.6
gb|AL450952.1|AL450952 AL450952 Hordeum vulgare Barke etiol... 25 5.8
gb|AL507405.1|AL507405 AL507405 Hordeum vulgare Barke devel... 26 5.9
gb|BU999610.1|BU999610 HI15B02r HI Hordeum vulgare subsp. v... 28 6.1
gb|BM374845.1|BM374845 EBma05_SQ003_D03_R maternal, 12 DPA,... 29 6.1
gb|CK122803.1|CK122803 BES1824106a06 BES1824 Hordeum vulgar... 27 6.2
gb|BI778817.2|BI778817 EBro01_SQ001_J17_R root, 3 week, hyd... 25 6.4
gb|AL505843.1|AL505843 AL505843 Hordeum vulgare Barke roots... 31 6.4
gb|AL505959.1|AL505959 AL505959 Hordeum vulgare Barke devel... 31 6.4
gb|AL506742.1|AL506742 AL506742 Hordeum vulgare Barke devel... 31 6.4
gb|AL507306.1|AL507306 AL507306 Hordeum vulgare Barke devel... 31 6.4
gb|AL507369.1|AL507369 AL507369 Hordeum vulgare Barke devel... 31 6.4
gb|BF616131.2|BF616131 HVSMEc0003E09f Hordeum vulgare seedl... 31 6.4
gb|BG309186.1|BG309186 HVSMEc0004K20f Hordeum vulgare seedl... 31 6.4
gb|BF253586.2|BF253586 HVSMEf0001J01f Hordeum vulgare seedl... 31 6.4
gb|BF254046.2|BF254046 HVSMEf0002N18f Hordeum vulgare seedl... 31 6.4
gb|BF254053.2|BF254053 HVSMEf0002O02f Hordeum vulgare seedl... 31 6.4
>gb|BJ448784.1|BJ448784 BJ448784 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak21d17 5', mRNA sequence
Length = 650
Score = 319 bits (692), Expect = 8e-087
Identities = 129/142 (90%), Positives = 135/142 (95%)
Frame = +2 / +3
Query: 2 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGISDWNSIFWVAHPGG 181
LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNI RAL+DAFKPLGI DWNS+FW+AHPGG
Sbjct: 39 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGG 218
Query: 182 PAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLD 361
PAILD VEAKV L+K RMRATRHVLSEYGNMSSACVLFI+DEMRKRSAEDG TTGEG+D
Sbjct: 219 PAILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHTTTGEGMD 398
Query: 362 WGVLFGFGPGLTVETVVLHSVP 427
WGVLFGFGPGLTVETVVLHSVP
Sbjct: 399 WGVLFGFGPGLTVETVVLHSVP 464
Score = 272 bits (588), Expect = 2e-072
Identities = 119/144 (82%), Positives = 122/144 (84%)
Frame = -3 / -2
Query: 432 VMGTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSER 253
VMGTLW TTVSTV PGPKPKRTPQS PSPVV PSSAERLRISS MK TQALDMLPYSER
Sbjct: 469 VMGTLWRTTVSTVRPGPKPKRTPQSIPSPVVVWPSSAERLRISSMMKSTQALDMLPYSER 290
Query: 252 TWRVARILALSSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARPMFLEMSPGT 73
T VARI +L TLAST SR+AGPPGCA QK EFQS MP+GL ASS AR MFLEMSPGT
Sbjct: 289 TCLVARIRSLFRFTLASTMSRIAGPPGCAIQKTEFQSSMPNGLKASSRARSMFLEMSPGT 110
Query: 72 SLSRWKVSPTSRRWPSMAPSESGR 1
S RWKVSPTSRRWPSMAPSESGR
Sbjct: 109 SFRRWKVSPTSRRWPSMAPSESGR 38
Score = 206 bits (444), Expect = 1e-052
Identities = 91/140 (65%), Positives = 111/140 (79%)
Frame = -2 / -1
Query: 421 AVEHDGLDGESRAEAEEDAPVEALARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAG 242
A+E+D L G++ AEAEE+APV +LA G+++L GA AH V DEE AGA HVA+ GED+ G
Sbjct: 458 AMENDRLHGKAGAEAEENAPVHSLASRGVAILSGAFAHFVHDEEHAGARHVAIFGEDMPG 279
Query: 241 GAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVPVGDAERLERVVQRAADVLGDEPGHVLEQ 62
GAHP LVQ LGLH V+D PAGVR+P+DGVPV DA+ LE V+ A DVLGDEPGHVL++
Sbjct: 278 GAHPFLVQVYLGLHHVKDCWPAGVRYPKDGVPVIDAQWLEGVL*GALDVLGDEPGHVLQE 99
Query: 61 VEGEPHLAEVAVDGALRVGQ 2
VEGE +L +VAVDGALRV Q
Sbjct: 98 VEGESNLTKVAVDGALRVWQ 39
Score = 48.3 bits (99), Expect(4) = 1e-023
Identities = 20/27 (74%), Positives = 20/27 (74%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGSPSTCSRTCPG 83
C TRRAPSTAT R SPST RTCPG
Sbjct: 40 CQTRRAPSTATFVRLDSPSTS*RTCPG 120
Score = 45.5 bits (93), Expect(4) = 1e-023
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1 / +2
Query: 232 DARHPPRPLRVRQHVQRLRPLHPRRDAQAL 321
DARH PLR+ QHV+RLR LH R+AQ L
Sbjct: 269 DARHQACPLRIWQHVERLRALHHGRNAQTL 358
Score = 35.4 bits (71), Expect(4) = 1e-023
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1 / +2
Query: 67 QGRARAHLQEHRPRAGRRVQ 126
+GRARAHLQEHR R R+Q
Sbjct: 104 EGRARAHLQEHRARPRGRLQ 163
Score = 35.0 bits (70), Expect(4) = 1e-023
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = +3 / +1
Query: 168 RTPAGPPSSTRWRPRSGWTRPGC 236
RTPAG S T WRPR TR GC
Sbjct: 205 RTPAGQQSLTWWRPR*T*TRNGC 273
>gb|BJ448811.1|BJ448811 BJ448811 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak21f08 5', mRNA sequence
Length = 580
Score = 319 bits (692), Expect = 8e-087
Identities = 129/142 (90%), Positives = 135/142 (95%)
Frame = +2 / +3
Query: 2 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGISDWNSIFWVAHPGG 181
LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNI RAL+DAFKPLGI DWNS+FW+AHPGG
Sbjct: 39 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGG 218
Query: 182 PAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLD 361
PAILD VEAKV L+K RMRATRHVLSEYGNMSSACVLFI+DEMRKRSAEDG TTGEG+D
Sbjct: 219 PAILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHTTTGEGMD 398
Query: 362 WGVLFGFGPGLTVETVVLHSVP 427
WGVLFGFGPGLTVETVVLHSVP
Sbjct: 399 WGVLFGFGPGLTVETVVLHSVP 464
Score = 272 bits (588), Expect = 2e-072
Identities = 119/144 (82%), Positives = 122/144 (84%)
Frame = -3 / -1
Query: 432 VMGTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSER 253
VMGTLW TTVSTV PGPKPKRTPQS PSPVV PSSAERLRISS MK TQALDMLPYSER
Sbjct: 469 VMGTLWRTTVSTVRPGPKPKRTPQSIPSPVVVWPSSAERLRISSMMKSTQALDMLPYSER 290
Query: 252 TWRVARILALSSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARPMFLEMSPGT 73
T VARI +L TLAST SR+AGPPGCA QK EFQS MP+GL ASS AR MFLEMSPGT
Sbjct: 289 TCLVARIRSLFRFTLASTMSRIAGPPGCAIQKTEFQSSMPNGLKASSRARSMFLEMSPGT 110
Query: 72 SLSRWKVSPTSRRWPSMAPSESGR 1
S RWKVSPTSRRWPSMAPSESGR
Sbjct: 109 SFRRWKVSPTSRRWPSMAPSESGR 38
Score = 206 bits (444), Expect = 1e-052
Identities = 91/140 (65%), Positives = 111/140 (79%)
Frame = -2 / -3
Query: 421 AVEHDGLDGESRAEAEEDAPVEALARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAG 242
A+E+D L G++ AEAEE+APV +LA G+++L GA AH V DEE AGA HVA+ GED+ G
Sbjct: 458 AMENDRLHGKAGAEAEENAPVHSLASRGVAILSGAFAHFVHDEEHAGARHVAIFGEDMPG 279
Query: 241 GAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVPVGDAERLERVVQRAADVLGDEPGHVLEQ 62
GAHP LVQ LGLH V+D PAGVR+P+DGVPV DA+ LE V+ A DVLGDEPGHVL++
Sbjct: 278 GAHPFLVQVYLGLHHVKDCWPAGVRYPKDGVPVIDAQWLEGVL*GALDVLGDEPGHVLQE 99
Query: 61 VEGEPHLAEVAVDGALRVGQ 2
VEGE +L +VAVDGALRV Q
Sbjct: 98 VEGESNLTKVAVDGALRVWQ 39
Score = 48.3 bits (99), Expect(4) = 1e-023
Identities = 20/27 (74%), Positives = 20/27 (74%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGSPSTCSRTCPG 83
C TRRAPSTAT R SPST RTCPG
Sbjct: 40 CQTRRAPSTATFVRLDSPSTS*RTCPG 120
Score = 45.5 bits (93), Expect(4) = 1e-023
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1 / +2
Query: 232 DARHPPRPLRVRQHVQRLRPLHPRRDAQAL 321
DARH PLR+ QHV+RLR LH R+AQ L
Sbjct: 269 DARHQACPLRIWQHVERLRALHHGRNAQTL 358
Score = 35.4 bits (71), Expect(4) = 1e-023
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1 / +2
Query: 67 QGRARAHLQEHRPRAGRRVQ 126
+GRARAHLQEHR R R+Q
Sbjct: 104 EGRARAHLQEHRARPRGRLQ 163
Score = 35.0 bits (70), Expect(4) = 1e-023
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = +3 / +1
Query: 168 RTPAGPPSSTRWRPRSGWTRPGC 236
RTPAG S T WRPR TR GC
Sbjct: 205 RTPAGQQSLTWWRPR*T*TRNGC 273
>gb|BJ458471.1|BJ458471 BJ458471 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak32c10 3', mRNA sequence
Length = 752
Score = 319 bits (692), Expect = 8e-087
Identities = 129/142 (90%), Positives = 135/142 (95%)
Frame = +2 / -2
Query: 2 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGISDWNSIFWVAHPGG 181
LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNI RAL+DAFKPLGI DWNS+FW+AHPGG
Sbjct: 703 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGG 524
Query: 182 PAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLD 361
PAILD VEAKV L+K RMRATRHVLSEYGNMSSACVLFI+DEMRKRSAEDG TTGEG+D
Sbjct: 523 PAILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHTTTGEGMD 344
Query: 362 WGVLFGFGPGLTVETVVLHSVP 427
WGVLFGFGPGLTVETVVLHSVP
Sbjct: 343 WGVLFGFGPGLTVETVVLHSVP 278
Score = 269 bits (581), Expect = 2e-071
Identities = 116/144 (80%), Positives = 121/144 (84%)
Frame = -3 / +3
Query: 432 VMGTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSER 253
V GTLW TTVSTV PGPKP RTPQS PSPVV CPSSA+RLRISS MKRT ALDMLPYSER
Sbjct: 273 VTGTLWRTTVSTVRPGPKPNRTPQSIPSPVVVCPSSADRLRISSMMKRTHALDMLPYSER 452
Query: 252 TWRVARILALSSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARPMFLEMSPGT 73
T VARI +L TLAST SR+AGPPGCA QK EFQS +P+GL ASS AR MFLEMSPGT
Sbjct: 453 TCLVARIRSLFRFTLASTMSRIAGPPGCAIQKTEFQSSIPNGLKASSRARSMFLEMSPGT 632
Query: 72 SLSRWKVSPTSRRWPSMAPSESGR 1
SL RWKV PTSRRWPSMAPSESGR
Sbjct: 633 SLRRWKVRPTSRRWPSMAPSESGR 704
Score = 169 bits (364), Expect = 1e-041
Identities = 79/140 (56%), Positives = 99/140 (70%)
Frame = -2 / +2
Query: 421 AVEHDGLDGESRAEAEEDAPVEALARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAG 242
A+E D LDGE+ +AE ++PV +L+ G+ +L G AH V DEE+A A HVA+ +D+ G
Sbjct: 284 AMEDDRLDGEAGTKAE*NSPVHSLSGCGVPILSGPFAHFVHDEENACA*HVAIFRKDMPG 463
Query: 241 GAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVPVGDAERLERVVQRAADVLGDEPGHVLEQ 62
GAH LVQ LG H V+D PAGVR+PEDGVP+ D + LE V+ A VLGDEP H+LE+
Sbjct: 464 GAHSFLVQVYLGFHHVKDCWPAGVRYPEDGVPIIDTQWLEGVL*GALYVLGDEPRHILEE 643
Query: 61 VEGEPHLAEVAVDGALRVGQ 2
VEGE L EVAVDGAL V Q
Sbjct: 644 VEGEADLPEVAVDGAL*VWQ 703
Score = 45.5 bits (93), Expect(4) = 2e-016
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +3 / -3
Query: 3 CPTRRAPSTATSARWGSPSTCSRTCPG 83
C T+RAPSTATS R SPST SR C G
Sbjct: 702 CQTQRAPSTATSGRSASPSTSSRMCLG 622
Score = 34.5 bits (69), Expect(4) = 2e-016
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1 / -1
Query: 232 DARHPPRPLRVRQHVQRLRPLHPRRDAQAL 321
+ARH P + QHV+R+R LH R+AQ +
Sbjct: 473 NARHQACPF*IWQHVKRMRSLHHGRNAQTV 384
Score = 29.9 bits (59), Expect(4) = 2e-016
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / -3
Query: 168 RTPAGPPSSTRWRPRSGWTRPGC 236
RTPAG S T W+PR TR C
Sbjct: 537 RTPAGQQSLTWWKPR*T*TRNEC 469
Score = 29.5 bits (58), Expect(4) = 2e-016
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / -1
Query: 67 QGRARAHLQEHRPRAGRRVQ 126
QG A AHLQEHR R R+Q
Sbjct: 638 QGCAWAHLQEHRARPRGRLQ 579
>gb|BJ461948.1|BJ461948 BJ461948 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak21f08 3', mRNA sequence
Length = 600
Score = 319 bits (692), Expect = 8e-087
Identities = 129/142 (90%), Positives = 135/142 (95%)
Frame = +2 / -1
Query: 2 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGISDWNSIFWVAHPGG 181
LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNI RAL+DAFKPLGI DWNS+FW+AHPGG
Sbjct: 561 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGG 382
Query: 182 PAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLD 361
PAILD VEAKV L+K RMRATRHVLSEYGNMSSACVLFI+DEMRKRSAEDG TTGEG+D
Sbjct: 381 PAILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHTTTGEGMD 202
Query: 362 WGVLFGFGPGLTVETVVLHSVP 427
WGVLFGFGPGLTVETVVLHSVP
Sbjct: 201 WGVLFGFGPGLTVETVVLHSVP 136
Score = 272 bits (588), Expect = 2e-072
Identities = 119/144 (82%), Positives = 122/144 (84%)
Frame = -3 / +2
Query: 432 VMGTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSER 253
VMGTLW TTVSTV PGPKPKRTPQS PSPVV PSSAERLRISS MK TQALDMLPYSER
Sbjct: 131 VMGTLWRTTVSTVRPGPKPKRTPQSIPSPVVVWPSSAERLRISSMMKSTQALDMLPYSER 310
Query: 252 TWRVARILALSSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARPMFLEMSPGT 73
T VARI +L TLAST SR+AGPPGCA QK EFQS MP+GL ASS AR MFLEMSPGT
Sbjct: 311 TCLVARIRSLFRFTLASTMSRIAGPPGCAIQKTEFQSSMPNGLKASSRARSMFLEMSPGT 490
Query: 72 SLSRWKVSPTSRRWPSMAPSESGR 1
S RWKVSPTSRRWPSMAPSESGR
Sbjct: 491 SFRRWKVSPTSRRWPSMAPSESGR 562
Score = 206 bits (444), Expect = 1e-052
Identities = 91/140 (65%), Positives = 111/140 (79%)
Frame = -2 / +1
Query: 421 AVEHDGLDGESRAEAEEDAPVEALARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAG 242
A+E+D L G++ AEAEE+APV +LA G+++L GA AH V DEE AGA HVA+ GED+ G
Sbjct: 142 AMENDRLHGKAGAEAEENAPVHSLASRGVAILSGAFAHFVHDEEHAGARHVAIFGEDMPG 321
Query: 241 GAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVPVGDAERLERVVQRAADVLGDEPGHVLEQ 62
GAHP LVQ LGLH V+D PAGVR+P+DGVPV DA+ LE V+ A DVLGDEPGHVL++
Sbjct: 322 GAHPFLVQVYLGLHHVKDCWPAGVRYPKDGVPVIDAQWLEGVL*GALDVLGDEPGHVLQE 501
Query: 61 VEGEPHLAEVAVDGALRVGQ 2
VEGE +L +VAVDGALRV Q
Sbjct: 502 VEGESNLTKVAVDGALRVWQ 561
Score = 48.3 bits (99), Expect(4) = 1e-023
Identities = 20/27 (74%), Positives = 20/27 (74%)
Frame = +3 / -2
Query: 3 CPTRRAPSTATSARWGSPSTCSRTCPG 83
C TRRAPSTAT R SPST RTCPG
Sbjct: 560 CQTRRAPSTATFVRLDSPSTS*RTCPG 480
Score = 45.5 bits (93), Expect(4) = 1e-023
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1 / -3
Query: 232 DARHPPRPLRVRQHVQRLRPLHPRRDAQAL 321
DARH PLR+ QHV+RLR LH R+AQ L
Sbjct: 331 DARHQACPLRIWQHVERLRALHHGRNAQTL 242
Score = 35.4 bits (71), Expect(4) = 1e-023
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1 / -3
Query: 67 QGRARAHLQEHRPRAGRRVQ 126
+GRARAHLQEHR R R+Q
Sbjct: 496 EGRARAHLQEHRARPRGRLQ 437
Score = 35.0 bits (70), Expect(4) = 1e-023
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = +3 / -2
Query: 168 RTPAGPPSSTRWRPRSGWTRPGC 236
RTPAG S T WRPR TR GC
Sbjct: 395 RTPAGQQSLTWWRPR*T*TRNGC 327
>gb|BJ461920.1|BJ461920 BJ461920 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak21d17 3', mRNA sequence
Length = 600
Score = 298 bits (646), Expect(2) = 3e-082
Identities = 120/133 (90%), Positives = 126/133 (94%)
Frame = +2 / -3
Query: 29 GHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGISDWNSIFWVAHPGGPAILDQVEA 208
GHLREVGLTFHLLKDVPGLISKNI RAL+DAFKPLGI DWNS+FW+AHPGGPAILD VEA
Sbjct: 532 GHLREVGLTFHLLKDVPGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGGPAILDMVEA 353
Query: 209 KVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLDWGVLFGFGP 388
KV L+K RMRATRHVLSEYGNMSSACVLFI+DEMRKRSAEDG TTGEG+DWGVLFGFGP
Sbjct: 352 KVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHTTTGEGMDWGVLFGFGP 173
Query: 389 GLTVETVVLHSVP 427
GLTVETVVLHSVP
Sbjct: 172 GLTVETVVLHSVP 134
Score = 252 bits (544), Expect(2) = 5e-068
Identities = 110/135 (81%), Positives = 113/135 (83%)
Frame = -3 / +3
Query: 432 VMGTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSER 253
VMGTLW TTVSTV PGPKPKRTPQS PSPVV PSSAERLRISS MK TQALDMLPYSER
Sbjct: 129 VMGTLWRTTVSTVRPGPKPKRTPQSIPSPVVVWPSSAERLRISSMMKSTQALDMLPYSER 308
Query: 252 TWRVARILALSSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARPMFLEMSPGT 73
T VARI +L TLAST SR+AGPPGCA QK EFQS MP+GL ASS AR MFLEMSPGT
Sbjct: 309 TCLVARIRSLFRFTLASTMSRIAGPPGCAIQKTEFQSSMPNGLKASSRARSMFLEMSPGT 488
Query: 72 SLSRWKVSPTSRRWP 28
S RWKVSPTSRRWP
Sbjct: 489 SFRRWKVSPTSRRWP 533
Score = 189 bits (408), Expect = 1e-047
Identities = 83/131 (63%), Positives = 103/131 (78%)
Frame = -2 / +2
Query: 421 AVEHDGLDGESRAEAEEDAPVEALARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAG 242
A+E+D L G++ AEAEE+APV +LA G+++L GA AH V DEE AGA HVA+ GED+ G
Sbjct: 140 AMENDRLHGKAGAEAEENAPVHSLASRGVAILSGAFAHFVHDEEHAGARHVAIFGEDMPG 319
Query: 241 GAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVPVGDAERLERVVQRAADVLGDEPGHVLEQ 62
GAHP LVQ LGLH V+D PAGVR+P+DGVPV DA+ LE V+ A DVLGDEPGHVL++
Sbjct: 320 GAHPFLVQVYLGLHHVKDCWPAGVRYPKDGVPVIDAQWLEGVL*GALDVLGDEPGHVLQE 499
Query: 61 VEGEPHLAEVA 29
VEGE +L +VA
Sbjct: 500 VEGESNLTKVA 532
Score = 45.5 bits (93), Expect(4) = 6e-018
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1 / -2
Query: 232 DARHPPRPLRVRQHVQRLRPLHPRRDAQAL 321
DARH PLR+ QHV+RLR LH R+AQ L
Sbjct: 329 DARHQACPLRIWQHVERLRALHHGRNAQTL 240
Score = 35.4 bits (71), Expect(4) = 6e-018
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +1 / -2
Query: 67 QGRARAHLQEHRPRAGRRVQ 126
+GRARAHLQEHR R R+Q
Sbjct: 494 EGRARAHLQEHRARPRGRLQ 435
Score = 35.0 bits (70), Expect(4) = 6e-018
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = +3 / -1
Query: 168 RTPAGPPSSTRWRPRSGWTRPGC 236
RTPAG S T WRPR TR GC
Sbjct: 393 RTPAGQQSLTWWRPR*T*TRNGC 325
Score = 28.6 bits (56), Expect(4) = 6e-018
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3 / -1
Query: 30 ATSARWGSPSTCSRTCPG 83
AT R SPST RTCPG
Sbjct: 531 ATFVRLDSPSTS*RTCPG 478
Score = 26.7 bits (52), Expect(2) = 3e-082
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / -2
Query: 2 LPDSEGAIDG 31
LPDSEGAIDG
Sbjct: 560 LPDSEGAIDG 531
Score = 26.3 bits (51), Expect(2) = 5e-068
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / +1
Query: 30 PSMAPSESGR 1
PSMAPSESGR
Sbjct: 532 PSMAPSESGR 561
>gb|AV909045.1|AV909045 AV909045 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11g05 5', mRNA sequence
Length = 645
Score = 303 bits (657), Expect = 5e-082
Identities = 122/135 (90%), Positives = 128/135 (94%)
Frame = +2 / +1
Query: 2 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGISDWNSIFWVAHPGG 181
LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNI RAL+DAFKPLGI DWNS+FW+AHPGG
Sbjct: 241 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGG 420
Query: 182 PAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLD 361
PAILD VEAKV L+K RMRATRHVLSEYGNMSSACVLFI+DEMRKRSAEDG TTGEG+D
Sbjct: 421 PAILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHTTTGEGMD 600
Query: 362 WGVLFGFGPGLTVET 406
WGVLFGFGPGLTVET
Sbjct: 601 WGVLFGFGPGLTVET 645
Score = 251 bits (543), Expect = 3e-066
Identities = 109/135 (80%), Positives = 114/135 (84%)
Frame = -3 / -2
Query: 405 VSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSERTWRVARILA 226
VSTV PGPKP RTPQS PSPVV CPSSA+RLRISS MKRT ALDMLPYSERT VARI +
Sbjct: 644 VSTVRPGPKPNRTPQSIPSPVVVCPSSADRLRISSMMKRTHALDMLPYSERTCLVARIRS 465
Query: 225 LSSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARPMFLEMSPGTSLSRWKVSP 46
L TLAST SR+AGPPGCA QK EFQS +P+GL ASS AR MFLEMSPGTSL RWKV P
Sbjct: 464 LFRFTLASTMSRIAGPPGCAIQKTEFQSSIPNGLKASSRARSMFLEMSPGTSLRRWKVRP 285
Query: 45 TSRRWPSMAPSESGR 1
TSRRWPSMAPSESGR
Sbjct: 284 TSRRWPSMAPSESGR 240
Score = 163 bits (351), Expect = 9e-040
Identities = 76/134 (56%), Positives = 95/134 (70%)
Frame = -2 / -1
Query: 403 LDGESRAEAEEDAPVEALARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAGGAHPGL 224
LDGE+ +AE ++PV +L+ G+ +L G AH V DEE+A A HVA+ +D+ GGAH L
Sbjct: 642 LDGEAGTKAE*NSPVHSLSGCGVPILSGPFAHFVHDEENACA*HVAIFRKDMPGGAHSFL 463
Query: 223 VQPDLGLHLVEDGGPAGVRHPEDGVPVGDAERLERVVQRAADVLGDEPGHVLEQVEGEPH 44
VQ LG H V+D PAGVR+PEDGVP+ D + LE V+ A VLGDEP H+LE+VEGE
Sbjct: 462 VQVYLGFHHVKDCWPAGVRYPEDGVPIIDTQWLEGVL*GALYVLGDEPRHILEEVEGEAD 283
Query: 43 LAEVAVDGALRVGQ 2
L EVAVDGAL V Q
Sbjct: 282 LPEVAVDGAL*VWQ 241
Score = 45.5 bits (93), Expect(4) = 2e-016
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +3 / +2
Query: 3 CPTRRAPSTATSARWGSPSTCSRTCPG 83
C T+RAPSTATS R SPST SR C G
Sbjct: 242 CQTQRAPSTATSGRSASPSTSSRMCLG 322
Score = 34.5 bits (69), Expect(4) = 2e-016
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1 / +3
Query: 232 DARHPPRPLRVRQHVQRLRPLHPRRDAQAL 321
+ARH P + QHV+R+R LH R+AQ +
Sbjct: 471 NARHQACPF*IWQHVKRMRSLHHGRNAQTV 560
Score = 29.9 bits (59), Expect(4) = 2e-016
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / +2
Query: 168 RTPAGPPSSTRWRPRSGWTRPGC 236
RTPAG S T W+PR TR C
Sbjct: 407 RTPAGQQSLTWWKPR*T*TRNEC 475
Score = 29.5 bits (58), Expect(4) = 2e-016
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +3
Query: 67 QGRARAHLQEHRPRAGRRVQ 126
QG A AHLQEHR R R+Q
Sbjct: 306 QGCAWAHLQEHRARPRGRLQ 365
>gb|BJ450964.1|BJ450964 BJ450964 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak32c10 5', mRNA sequence
Length = 638
Score = 303 bits (657), Expect = 5e-082
Identities = 122/135 (90%), Positives = 128/135 (94%)
Frame = +2 / +3
Query: 2 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGISDWNSIFWVAHPGG 181
LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNI RAL+DAFKPLGI DWNS+FW+AHPGG
Sbjct: 234 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGG 413
Query: 182 PAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLD 361
PAILD VEAKV L+K RMRATRHVLSEYGNMSSACVLFI+DEMRKRSAEDG TTGEG+D
Sbjct: 414 PAILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHTTTGEGMD 593
Query: 362 WGVLFGFGPGLTVET 406
WGVLFGFGPGLTVET
Sbjct: 594 WGVLFGFGPGLTVET 638
Score = 251 bits (543), Expect = 3e-066
Identities = 109/135 (80%), Positives = 114/135 (84%)
Frame = -3 / -2
Query: 405 VSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSERTWRVARILA 226
VSTV PGPKP RTPQS PSPVV CPSSA+RLRISS MKRT ALDMLPYSERT VARI +
Sbjct: 637 VSTVRPGPKPNRTPQSIPSPVVVCPSSADRLRISSMMKRTHALDMLPYSERTCLVARIRS 458
Query: 225 LSSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARPMFLEMSPGTSLSRWKVSP 46
L TLAST SR+AGPPGCA QK EFQS +P+GL ASS AR MFLEMSPGTSL RWKV P
Sbjct: 457 LFRFTLASTMSRIAGPPGCAIQKTEFQSSIPNGLKASSRARSMFLEMSPGTSLRRWKVRP 278
Query: 45 TSRRWPSMAPSESGR 1
TSRRWPSMAPSESGR
Sbjct: 277 TSRRWPSMAPSESGR 233
Score = 163 bits (351), Expect = 9e-040
Identities = 76/134 (56%), Positives = 95/134 (70%)
Frame = -2 / -1
Query: 403 LDGESRAEAEEDAPVEALARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAGGAHPGL 224
LDGE+ +AE ++PV +L+ G+ +L G AH V DEE+A A HVA+ +D+ GGAH L
Sbjct: 635 LDGEAGTKAE*NSPVHSLSGCGVPILSGPFAHFVHDEENACA*HVAIFRKDMPGGAHSFL 456
Query: 223 VQPDLGLHLVEDGGPAGVRHPEDGVPVGDAERLERVVQRAADVLGDEPGHVLEQVEGEPH 44
VQ LG H V+D PAGVR+PEDGVP+ D + LE V+ A VLGDEP H+LE+VEGE
Sbjct: 455 VQVYLGFHHVKDCWPAGVRYPEDGVPIIDTQWLEGVL*GALYVLGDEPRHILEEVEGEAD 276
Query: 43 LAEVAVDGALRVGQ 2
L EVAVDGAL V Q
Sbjct: 275 LPEVAVDGAL*VWQ 234
Score = 45.5 bits (93), Expect(4) = 2e-016
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGSPSTCSRTCPG 83
C T+RAPSTATS R SPST SR C G
Sbjct: 235 CQTQRAPSTATSGRSASPSTSSRMCLG 315
Score = 34.5 bits (69), Expect(4) = 2e-016
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1 / +2
Query: 232 DARHPPRPLRVRQHVQRLRPLHPRRDAQAL 321
+ARH P + QHV+R+R LH R+AQ +
Sbjct: 464 NARHQACPF*IWQHVKRMRSLHHGRNAQTV 553
Score = 29.9 bits (59), Expect(4) = 2e-016
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / +1
Query: 168 RTPAGPPSSTRWRPRSGWTRPGC 236
RTPAG S T W+PR TR C
Sbjct: 400 RTPAGQQSLTWWKPR*T*TRNEC 468
Score = 29.5 bits (58), Expect(4) = 2e-016
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +2
Query: 67 QGRARAHLQEHRPRAGRRVQ 126
QG A AHLQEHR R R+Q
Sbjct: 299 QGCAWAHLQEHRARPRGRLQ 358
>emb|Y09233.1|HVCHS2 H.vulgare mRNA for homoeriodictyol/eriodictyol chalcone synthase
Length = 1493
Score = 284 bits (615), Expect = 3e-076
Identities = 116/142 (81%), Positives = 129/142 (90%)
Frame = +2 / +2
Query: 2 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGISDWNSIFWVAHPGG 181
LP+SEGAIDGHL E GLT HLLKDVPGLIS+NI +AL+DAF+PLGI +WNSIFW+AHPGG
Sbjct: 776 LPESEGAIDGHLTEAGLTIHLLKDVPGLISENIEQALEDAFEPLGIHNWNSIFWIAHPGG 955
Query: 182 PAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLD 361
PAILD+VE +VGLDK RMRA+R VLSEYGNMSSA VLF+LD MRK SA+DG ATTGEG D
Sbjct: 956 PAILDRVEDRVGLDKKRMRASREVLSEYGNMSSASVLFVLDVMRKSSAKDGLATTGEGKD 1135
Query: 362 WGVLFGFGPGLTVETVVLHSVP 427
WGVLFGFGPGLTVET+VLHSVP
Sbjct: 1136 WGVLFGFGPGLTVETLVLHSVP 1201
Score = 234 bits (506), Expect = 4e-061
Identities = 104/142 (73%), Positives = 113/142 (79%)
Frame = -3 / -3
Query: 426 GTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSERTW 247
GTLW T+VSTV PGPKPKRTPQS PSPVVA PS AE LRI+SR K T ALDM PYS+RT
Sbjct: 1200 GTLWRTSVSTVRPGPKPKRTPQSLPSPVVARPSLAELLRITSRTKSTLALDMFPYSDRTS 1021
Query: 246 RVARILALSSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARPMFLEMSPGTSL 67
R+AR+ LS PTL+ST SRMAGPPG A QKMEFQ MP G NASS+A +F EMSPGTSL
Sbjct: 1020 RLARMRFLSRPTLSSTLSRMAGPPG*AIQKMEFQLWMPRGSNASSNACSIFSEMSPGTSL 841
Query: 66 SRWKVSPTSRRWPSMAPSESGR 1
RW V P S RWPSMAPS+SGR
Sbjct: 840 RRWMVRPASVRWPSMAPSDSGR 775
Score = 160 bits (345), Expect = 6e-039
Identities = 76/140 (54%), Positives = 100/140 (71%)
Frame = -2 / -2
Query: 421 AVEHDGLDGESRAEAEEDAPVEALARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAG 242
AVE + LDGE+RAEAEED PV A + G ++LGGAL H V+DEE AGHV+VL +++
Sbjct: 1195 AVEDECLDGEARAEAEEDTPVLAFSSCGEAILGGALTHNVKDEEYTCAGHVSVLRQNLPA 1016
Query: 241 GAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVPVGDAERLERVVQRAADVLGDEPGHVLEQ 62
AH LV+ + L V+DG P V +PEDGVPV DA+RL+RV+ D+L DE HVLE+
Sbjct: 1015 CAHALLVKANSVLDPVKDGRPPRVSNPEDGVPVVDAQRLKRVL*CLLDILRDESRHVLEK 836
Query: 61 VEGEPHLAEVAVDGALRVGQ 2
V+G+ L +VAVDG+LR+ Q
Sbjct: 835 VDGQARLRKVAVDGSLRLRQ 776
Score = 36.8 bits (74), Expect(2) = 0.009
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +3 / +3
Query: 3 CPTRRAPSTATSARWGSPSTCSRTC 77
C +RR PSTAT R PST SRTC
Sbjct: 777 CRSRREPSTATLRRRA*PSTFSRTC 851
Score = 24.9 bits (48), Expect(2) = 0.009
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1 / +1
Query: 235 ARHPPRPLRVRQHVQRLRPLHPRRDA 312
AR P + VR+HVQR L P R A
Sbjct: 1009 ARKPGGSVGVRKHVQRKCTLRP*RYA 1086
>gb|BJ450871.1|BJ450871 BJ450871 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31l01 5', mRNA sequence
Length = 424
Score = 268 bits (580), Expect = 2e-071
Identities = 108/125 (86%), Positives = 114/125 (91%)
Frame = +2 / +1
Query: 11 SEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGISDWNSIFWVAHPGGPAI 190
SEGAIDGHLREVGLTFHLLKDVPGLISKNI RAL+DAFKPLGI DWNS+FW+AHPGG AI
Sbjct: 49 SEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGGXAI 228
Query: 191 LDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLDWGV 370
LD VEAKV L+K RMRATRHVLSEYGNMSSACVLFI+DEMRKR EDG TTGEG+DWGV
Sbjct: 229 LDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRXXEDGHTTTGEGMDWGV 408
Query: 371 LFGFG 385
L GFG
Sbjct: 409 LXGFG 423
Score = 219 bits (473), Expect = 1e-056
Identities = 96/125 (76%), Positives = 100/125 (80%)
Frame = -3 / -3
Query: 384 PKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSERTWRVARILALSSPTLA 205
P P RTPQS PSPVV CPSS RLRISS M RT ALDMLPYSERT VARI +L TLA
Sbjct: 422 PXPNRTPQSIPSPVVVCPSSXXRLRISSMMXRTHALDMLPYSERTCLVARIRSLFRFTLA 243
Query: 204 STWSRMAGPPGCATQKMEFQSEMPSGLNASSSARPMFLEMSPGTSLSRWKVSPTSRRWPS 25
ST SR+A PPGCA QK EFQS +P+GL ASS AR MFLEMSPGTSL RWKV PTSRRWPS
Sbjct: 242 STMSRIAXPPGCAIQKTEFQSSIPNGLKASSRARSMFLEMSPGTSLRRWKVRPTSRRWPS 63
Query: 24 MAPSE 10
MAPSE
Sbjct: 62 MAPSE 48
Score = 140 bits (300), Expect = 1e-032
Identities = 65/119 (54%), Positives = 82/119 (68%)
Frame = -2 / -2
Query: 370 DAPVEALARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAGGAHPGLVQPDLGLHLVE 191
++PV +L+ G+ +L AH V DE +A A HVA+ +D+ GGAH LVQ LG H V+
Sbjct: 408 NSPVHSLSGCGVPILXXPFAHFVHDEXNACA*HVAIFRKDMPGGAHSFLVQVYLGFHHVK 229
Query: 190 DGGPAGVRHPEDGVPVGDAERLERVVQRAADVLGDEPGHVLEQVEGEPHLAEVAVDGAL 14
D AGVR+PEDGVP+ D + LE V+ A VLGDEP H+LE+VEGE L EVAVDGAL
Sbjct: 228 DCXXAGVRYPEDGVPIIDTQWLEGVL*GALYVLGDEPRHILEEVEGEADLPEVAVDGAL 52
Score = 41.8 bits (85), Expect(4) = 7e-014
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +3 / +2
Query: 9 TRRAPSTATSARWGSPSTCSRTCPG 83
T+RAPSTATS R SPST SR C G
Sbjct: 47 TQRAPSTATSGRSASPSTSSRMCLG 121
Score = 32.2 bits (64), Expect(4) = 7e-014
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1 / +3
Query: 232 DARHPPRPLRVRQHVQRLRPLHPRRDAQAL 321
+ARH P + QHV+R+R H R+AQ +
Sbjct: 270 NARHQACPF*IWQHVKRMRSXHHGRNAQTV 359
Score = 29.5 bits (58), Expect(4) = 7e-014
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / +3
Query: 67 QGRARAHLQEHRPRAGRRVQ 126
QG A AHLQEHR R R+Q
Sbjct: 105 QGCAWAHLQEHRARPRGRLQ 164
Score = 26.7 bits (52), Expect(4) = 7e-014
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3 / +2
Query: 168 RTPAGPPSSTRWRPRSGWTRPGC 236
RTPA S T W+PR TR C
Sbjct: 206 RTPAXQQSLTWWKPR*T*TRNEC 274
>gb|AV910927.1|AV910927 AV910927 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak11g05 3', mRNA sequence
Length = 629
Score = 267 bits (577), Expect = 6e-071
Identities = 107/120 (89%), Positives = 113/120 (94%)
Frame = +2 / -2
Query: 68 KDVPGLISKNIGRALDDAFKPLGISDWNSIFWVAHPGGPAILDQVEAKVGLDKARMRATR 247
KDVPGLISKNI RAL+DAFKPLGI DWNS+FW+AHPGGPAILD VEAKV L+K RMRATR
Sbjct: 628 KDVPGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGGPAILDMVEAKVNLNKERMRATR 449
Query: 248 HVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLDWGVLFGFGPGLTVETVVLHSVP 427
HVLSEYGNMSSACVLFI+DEMRKRSAEDG TTGEG+DWGVLFGFGPGLTVETVVLHSVP
Sbjct: 448 HVLSEYGNMSSACVLFIMDEMRKRSAEDGHTTTGEGMDWGVLFGFGPGLTVETVVLHSVP 269
Score = 218 bits (470), Expect = 3e-056
Identities = 96/122 (78%), Positives = 101/122 (82%)
Frame = -3 / +3
Query: 432 VMGTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSER 253
V GTLW TTVSTV PGPKP RTPQS PSPVV CPSSA+RLRISS MKRT ALDMLPYSER
Sbjct: 264 VTGTLWRTTVSTVRPGPKPNRTPQSIPSPVVVCPSSADRLRISSMMKRTHALDMLPYSER 443
Query: 252 TWRVARILALSSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARPMFLEMSPGT 73
T VARI +L TLAST SR+AGPPGCA QK EFQS +P+GL ASS AR MFLEMSPGT
Sbjct: 444 TCLVARIRSLFRFTLASTMSRIAGPPGCAIQKTEFQSSIPNGLKASSRARSMFLEMSPGT 623
Query: 72 SL 67
SL
Sbjct: 624 SL 629
Score = 138 bits (296), Expect = 3e-032
Identities = 63/118 (53%), Positives = 82/118 (69%)
Frame = -2 / +2
Query: 421 AVEHDGLDGESRAEAEEDAPVEALARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAG 242
A+E D LDGE+ +AE ++PV +L+ G+ +L G AH V DEE+A A HVA+ +D+ G
Sbjct: 275 AMEDDRLDGEAGTKAE*NSPVHSLSGCGVPILSGPFAHFVHDEENACA*HVAIFRKDMPG 454
Query: 241 GAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVPVGDAERLERVVQRAADVLGDEPGHVL 68
GAH LVQ LG H V+D PAGVR+PEDGVP+ D + LE V+ A VLGDEP H+L
Sbjct: 455 GAHSFLVQVYLGFHHVKDCWPAGVRYPEDGVPIIDTQWLEGVL*GALYVLGDEPRHIL 628
Score = 34.5 bits (69), Expect(3) = 3e-008
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1 / -1
Query: 232 DARHPPRPLRVRQHVQRLRPLHPRRDAQAL 321
+ARH P + QHV+R+R LH R+AQ +
Sbjct: 464 NARHQACPF*IWQHVKRMRSLHHGRNAQTV 375
Score = 29.9 bits (59), Expect(3) = 3e-008
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / -3
Query: 168 RTPAGPPSSTRWRPRSGWTRPGC 236
RTPAG S T W+PR TR C
Sbjct: 528 RTPAGQQSLTWWKPR*T*TRNEC 460
Score = 29.5 bits (58), Expect(3) = 3e-008
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1 / -1
Query: 67 QGRARAHLQEHRPRAGRRVQ 126
QG A AHLQEHR R R+Q
Sbjct: 629 QGCAWAHLQEHRARPRGRLQ 570
>gb|BJ458128.1|BJ458128 BJ458128 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak30m15 3', mRNA sequence
Length = 264
Score = 195 bits (420), Expect = 3e-049
Identities = 78/87 (89%), Positives = 82/87 (94%)
Frame = +2 / -2
Query: 161 WVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQA 340
W+AHPGGPAILD VEAKV L+K RMRATRHVLSEYGNMSSACVLFI+DEMRKRSAEDG
Sbjct: 263 WIAHPGGPAILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHT 84
Query: 341 TTGEGLDWGVLFGFGPGLTVETVVLHS 421
TTGEG+DWGVLFGFGPGLTVETVVLHS
Sbjct: 83 TTGEGMDWGVLFGFGPGLTVETVVLHS 3
Score = 160 bits (344), Expect = 8e-039
Identities = 70/88 (79%), Positives = 73/88 (82%)
Frame = -3 / +1
Query: 423 TLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSERTWR 244
TLW TTVSTV PGPKP RTPQS PSPVV CPSSA+RLRISS MKRT ALDMLPYSERT
Sbjct: 1 TLWRTTVSTVRPGPKPNRTPQSIPSPVVVCPSSADRLRISSMMKRTHALDMLPYSERTCL 180
Query: 243 VARILALSSPTLASTWSRMAGPPGCATQ 160
VARI +L TLAST SR+AGPPGCA Q
Sbjct: 181 VARIRSLFRFTLASTMSRIAGPPGCAIQ 264
Score = 100 bits (213), Expect = 1e-020
Identities = 45/87 (51%), Positives = 60/87 (68%)
Frame = -2 / +3
Query: 421 AVEHDGLDGESRAEAEEDAPVEALARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAG 242
A+E D LDGE+ +AE ++PV +L+ G+ +L G AH V DEE+A A HVA+ +D+ G
Sbjct: 3 AMEDDRLDGEAGTKAE*NSPVHSLSGCGVPILSGPFAHFVHDEENACA*HVAIFRKDMPG 182
Query: 241 GAHPGLVQPDLGLHLVEDGGPAGVRHP 161
GAH LVQ LG H V+D PAGVR+P
Sbjct: 183 GAHSFLVQVYLGFHHVKDCWPAGVRYP 263
Score = 34.5 bits (69), Expect(2) = 1e-004
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1 / -1
Query: 232 DARHPPRPLRVRQHVQRLRPLHPRRDAQAL 321
+ARH P + QHV+R+R LH R+AQ +
Sbjct: 192 NARHQACPF*IWQHVKRMRSLHHGRNAQTV 103
Score = 29.9 bits (59), Expect(2) = 1e-004
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3 / -3
Query: 168 RTPAGPPSSTRWRPRSGWTRPGC 236
RTPAG S T W+PR TR C
Sbjct: 256 RTPAGQQSLTWWKPR*T*TRNEC 188
>gb|AV909853.1|AV909853 AV909853 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak2d13 5', mRNA sequence
Length = 391
Score = 192 bits (413), Expect = 2e-048
Identities = 78/87 (89%), Positives = 81/87 (93%)
Frame = +2 / +3
Query: 167 AHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATT 346
AHPGGPAILD VEAKV L+K RMRATRHVL EYGNMSSACVLFI+DEMRKRSAEDG TT
Sbjct: 3 AHPGGPAILDMVEAKVNLNKERMRATRHVLXEYGNMSSACVLFIMDEMRKRSAEDGHTTT 182
Query: 347 GEGLDWGVLFGFGPGLTVETVVLHSVP 427
GEG+DWGVLFGFGPGLTVETVVLHSVP
Sbjct: 183 GEGMDWGVLFGFGPGLTVETVVLHSVP 263
Score = 160 bits (344), Expect = 8e-039
Identities = 70/89 (78%), Positives = 73/89 (82%)
Frame = -3 / -1
Query: 432 VMGTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSER 253
V GTLW TTVSTV PGPKP RTPQS PSPVV CPSSA+RLRISS MKRT ALDMLPYS R
Sbjct: 268 VTGTLWXTTVSTVRPGPKPNRTPQSIPSPVVVCPSSADRLRISSMMKRTHALDMLPYSXR 89
Query: 252 TWRVARILALSSPTLASTWSRMAGPPGCA 166
T VARI +L TLAST SR+AGPPGCA
Sbjct: 88 TCLVARIRSLFRFTLASTMSRIAGPPGCA 2
Score = 92.7 bits (196), Expect = 2e-018
Identities = 43/85 (50%), Positives = 57/85 (67%)
Frame = -2 / -3
Query: 421 AVEHDGLDGESRAEAEEDAPVEALARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAG 242
A+E D LDGE+ +AE ++PV +L+ G+ +L G AH V DEE+A A HVA+ +D+ G
Sbjct: 257 AMEXDRLDGEAGTKAE*NSPVHSLSGCGVPILSGPFAHFVHDEENACA*HVAIFXKDMPG 78
Query: 241 GAHPGLVQPDLGLHLVEDGGPAGVR 167
GAH LVQ LG H V+D AGVR
Sbjct: 77 GAHSFLVQVYLGFHHVKDCWXAGVR 3
Score = 34.1 bits (68), Expect(2) = 0.002
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1 / +2
Query: 232 DARHPPRPLRVRQHVQRLRPLHPRRDAQAL 321
+ARH P + QHV+R+R LH R+AQ +
Sbjct: 68 NARHQACPX*IWQHVKRMRSLHHGRNAQTV 157
Score = 26.7 bits (52), Expect(2) = 0.002
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3 / +1
Query: 168 RTPAGPPSSTRWRPRSGWTRPGC 236
RTPA S T W+PR TR C
Sbjct: 4 RTPAXQQSLTWWKPR*T*TRNEC 72
>gb|BI957217.1|BI957217 HVSMEn0008D06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0008D06f, mRNA sequence
Length = 621
Score = 178 bits (384), Expect = 2e-044
Identities = 74/84 (88%), Positives = 78/84 (92%)
Frame = +2 / -2
Query: 176 GGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEG 355
GGPAILD VEAKV L+K+ RATRHVLSEYG MSSACVLFI+DEMRKRSAEDG ATTGEG
Sbjct: 620 GGPAILDMVEAKVNLNKSGWRATRHVLSEYGXMSSACVLFIMDEMRKRSAEDGHATTGEG 441
Query: 356 LDWGVLFGFGPGLTVETVVLHSVP 427
+DWGVLFGFGPGLTVETVVLHSVP
Sbjct: 440 MDWGVLFGFGPGLTVETVVLHSVP 369
Score = 154 bits (330), Expect = 7e-037
Identities = 70/89 (78%), Positives = 72/89 (80%)
Frame = -3 / +1
Query: 441 APVVMGTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPY 262
AP +MGTLW TTVSTV PGPKPKRTPQS PSPVVA PSSAERLRISS MKRT ALDM PY
Sbjct: 355 APALMGTLWRTTVSTVRPGPKPKRTPQSIPSPVVAWPSSAERLRISSMMKRTHALDMXPY 534
Query: 261 SERTWRVARILALSSPTLASTWSRMAGPP 175
SERT VAR L TLAST SR+AGPP
Sbjct: 535 SERTCLVARHPLLFRFTLASTMSRIAGPP 621
Score = 102 bits (218), Expect = 2e-021
Identities = 49/78 (62%), Positives = 57/78 (73%)
Frame = -2 / +3
Query: 421 AVEHDGLDGESRAEAEEDAPVEALARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAG 242
AVE DGL E+ AEAEE+APV +LA G+++LG ALAHLV DE+D GHVAVLGED+ G
Sbjct: 375 AVEDDGLHREAGAEAEENAPVHSLAGCGVAILGRALAHLVHDEKDTCTGHVAVLGEDMPG 554
Query: 241 GAHPGLVQPDLGLHLVED 188
A LVQ LGL VED
Sbjct: 555 CAPSALVQVYLGLDHVED 608
Score = 40.0 bits (81), Expect = 0.015
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +1 / -1
Query: 235 ARHPPRPLRVRQHVQRLRPLHPRRDAQAL 321
AR+ PLRVR HVQ + P H RDAQAL
Sbjct: 561 ARNQACPLRVRXHVQCMCPFHHGRDAQAL 475
>gb|CX662629.1|CX662629 EST 455 Expressed sequences from Barley Hordeum vulgare subsp.
vulgare cDNA clone P455 5', mRNA sequence
Length = 316
Score = 176 bits (379), Expect = 1e-043
Identities = 73/80 (91%), Positives = 76/80 (95%)
Frame = +2 / +2
Query: 188 ILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLDWG 367
ILD VEAKV L+K RMRATRHVLSEYGNMSSACVLFI+DEMRKRSAEDG ATTGEG+DWG
Sbjct: 2 ILDMVEAKVNLNKERMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHATTGEGMDWG 181
Query: 368 VLFGFGPGLTVETVVLHSVP 427
VLFGFGPGLTVETVVLHSVP
Sbjct: 182 VLFGFGPGLTVETVVLHSVP 241
Score = 149 bits (321), Expect = 1e-035
Identities = 68/85 (80%), Positives = 71/85 (83%)
Frame = -3 / -2
Query: 441 APVVMGTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPY 262
AP +MGTLW TTVSTV PGPKPKRTPQS PSPVVA PSSAERLRISS MKRT ALDMLPY
Sbjct: 255 APALMGTLWRTTVSTVRPGPKPKRTPQSIPSPVVAWPSSAERLRISSMMKRTHALDMLPY 76
Query: 261 SERTWRVARILALSSPTLASTWSRM 187
SERT VARI +L TLAST SR+
Sbjct: 75 SERTCLVARIRSLFRFTLASTMSRI 1
Score = 109 bits (232), Expect(2) = 6e-024
Identities = 51/78 (65%), Positives = 59/78 (75%)
Frame = -2 / -1
Query: 421 AVEHDGLDGESRAEAEEDAPVEALARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAG 242
AVE DGL E+ AEAEE+APV +LA G+++LG ALAHLV DE+D GHVAVLGED+ G
Sbjct: 235 AVEDDGLHREAGAEAEENAPVHSLAGCGVAILGRALAHLVHDEKDTCTGHVAVLGEDMPG 56
Query: 241 GAHPGLVQPDLGLHLVED 188
AHP LVQ LGL VED
Sbjct: 55 CAHPLLVQVYLGLDHVED 2
Score = 45.5 bits (93), Expect(3) = 3e-006
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +1 / +1
Query: 232 DARHPPRPLRVRQHVQRLRPLHPRRDAQAL 321
DAR+ PLRVRQHVQ + P H RDAQAL
Sbjct: 46 DARNQACPLRVRQHVQCMCPFHHGRDAQAL 135
Score = 21.2 bits (40), Expect(2) = 6e-024
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1 / -3
Query: 437 RW*WGRCG 414
R *WGRCG
Sbjct: 251 RR*WGRCG 228
Score = 20.8 bits (39), Expect(3) = 3e-006
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1 / +1
Query: 403 DRRAPQRP 426
DRR PQRP
Sbjct: 217 DRRPPQRP 240
Score = 20.3 bits (38), Expect(3) = 3e-006
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3 / +3
Query: 189 SSTRWRPRSGWTRPGC 236
SST RPR TR GC
Sbjct: 3 SSTWSRPR*T*TRSGC 50
>gb|AV911953.1|AV911953 AV911953 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak2d13 3', mRNA sequence
Length = 498
Score = 161 bits (347), Expect = 3e-039
Identities = 68/81 (83%), Positives = 71/81 (87%)
Frame = +2 / -3
Query: 185 AILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGLDW 364
AILD V AKV L+K MRATRHVLSEYGNMSSACVLFI+DEMRKRSAEDG TT EG+DW
Sbjct: 496 AILDMVXAKVNLNKEXMRATRHVLSEYGNMSSACVLFIMDEMRKRSAEDGHTTTXEGMDW 317
Query: 365 GVLFGFGPGLTVETVVLHSVP 427
GVL GFGPGLTV TVVLHSVP
Sbjct: 316 GVLXGFGPGLTVXTVVLHSVP 254
Score = 136 bits (292), Expect = 1e-031
Identities = 62/83 (74%), Positives = 65/83 (78%)
Frame = -3 / +3
Query: 432 VMGTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSER 253
V GTLW TTVSTV PGPKP RTPQS PS VV CPSSA+RLRISS M RT ALDMLPYSER
Sbjct: 249 VTGTLWRTTVSTVRPGPKPNRTPQSIPSXVVVCPSSADRLRISSMMXRTHALDMLPYSER 428
Query: 252 TWRVARILALSSPTLASTWSRMA 184
T VARI +L TLA T SR+A
Sbjct: 429 TCLVARIXSLFRFTLAXTMSRIA 497
Score = 74.8 bits (157), Expect = 5e-013
Identities = 35/78 (44%), Positives = 48/78 (61%)
Frame = -2 / +2
Query: 421 AVEHDGLDGESRAEAEEDAPVEALARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAG 242
A+E D GE+ +A ++PV +L G+ +L G AH V DE +A A HVA+ +D+ G
Sbjct: 260 AMEDDRXXGEAGTKAX*NSPVHSLXGCGVPILSGPFAHFVHDEXNACA*HVAIFRKDMPG 439
Query: 241 GAHPGLVQPDLGLHLVED 188
GAH LVQ LG H V+D
Sbjct: 440 GAHSFLVQVYLGXHHVKD 493
Score = 32.2 bits (64), Expect = 3.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1 / -2
Query: 232 DARHPPRPLRVRQHVQRLRPLHPRRDAQAL 321
+ARH P + QHV+R+R H R+AQ +
Sbjct: 449 NARHQACPF*IWQHVKRMRSXHHGRNAQTV 360
>gb|AV929494.1|AV929494 AV929494 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14g21 3', mRNA sequence
Length = 625
Score = 85.8 bits (181), Expect(3) = 3e-028
Identities = 30/65 (46%), Positives = 45/65 (69%)
Frame = +2 / -1
Query: 143 DWNSIFWVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRS 322
+WN +FW HPG AILD++E + L+ ++ A+R V EYGNM S ++F+LDE R+R
Sbjct: 436 NWNDLFWAVHPGAMAILDKIERVLQLEPGKLAASRTVAREYGNMLSTTIIFVLDEQRRRM 257
Query: 323 AEDGQ 337
E+G+
Sbjct: 256 EEEGE 242
Score = 50.6 bits (104), Expect = 1e-005
Identities = 27/63 (42%), Positives = 32/63 (50%)
Frame = -3 / +3
Query: 333 PSSAERLRISSRMKRTQALDMLPYSERTWRVARILALSSPTLASTWSRMAGPPGCATQKM 154
PSS+ R R SS K L M PYS T R+A S+ S S++A PGC QK
Sbjct: 246 PSSSIRRRCSSSTKMMVVLSMFPYSRATVRLAASFPGSNWRTLSILSKIAIAPGCTAQKR 425
Query: 153 EFQ 145
FQ
Sbjct: 426 SFQ 434
Score = 38.6 bits (78), Expect(3) = 3e-028
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2 / -1
Query: 2 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGI 139
+PD+ + +R GL ++ +P L++ NI + L DAF PLG+
Sbjct: 580 IPDTLQVVTAEIRTCGLDGNVSTKLPNLVADNIKQCLLDAFGPLGM 443
Score = 38.2 bits (77), Expect(3) = 3e-028
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / -1
Query: 347 GEGLDWGVLFGFGPGLTVETVVLHS 421
GE WG + FGPG T+ET+VL +
Sbjct: 247 GEWAQWGAMVAFGPGFTMETMVLQA 173
>gb|CB882479.1|CB882479 HL01P16w HL Hordeum vulgare subsp. vulgare cDNA clone HL01P16
3-PRIME, mRNA sequence
Length = 604
Score = 83.1 bits (175), Expect(3) = 1e-023
Identities = 28/61 (45%), Positives = 43/61 (70%)
Frame = +2 / +2
Query: 146 WNSIFWVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSA 325
WN +FW HPG AILD+++ + L+ ++ A+R VLS+YGNM ++F+LDE+R+R
Sbjct: 245 WNDLFWAVHPGSSAILDRIDTVLQLESEKLAASRRVLSDYGNMFGVTIIFVLDELRRRLR 424
Query: 326 E 328
E
Sbjct: 425 E 427
Score = 43.7 bits (89), Expect(3) = 1e-023
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +2 / +2
Query: 359 DWGVLFGFGPGLTVETVVLHS 421
+WGV+ FGPGLTVET+VLH+
Sbjct: 452 EWGVMMTFGPGLTVETMVLHA 514
Score = 37.7 bits (76), Expect(3) = 9e-012
Identities = 23/55 (41%), Positives = 27/55 (49%)
Frame = -3 / -2
Query: 312 RISSRMKRTQALDMLPYSERTWRVARILALSSPTLASTWSRMAGPPGCATQKMEF 148
R SSR +MLP S T R+A + SS + S S MA PGC QK F
Sbjct: 411 RSSSRTNIIVTPNMLP*SLSTRRLAASFSDSSWSTVSMRSSMADEPGCTAQKRSF 247
Score = 36.8 bits (74), Expect(3) = 9e-012
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = -3 / -2
Query: 414 STTVSTVSPGPKPKRTPQSRPSPVVACPSSAER 316
+T VSTVSPGPK TP S P C S R
Sbjct: 507 NTIVSTVSPGPKVIITPHSGTPPTPCCSLSLRR 409
Score = 33.1 bits (66), Expect = 1.8
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = -2 / -1
Query: 307 LVEDEEDAGAGHVAVLGEDVAGGAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVP 146
LVE++ + A HVAV+ E A ++ + ++ ++ G AGV PE+ VP
Sbjct: 406 LVENKYNRHAEHVAVVAEHPAARRQLLRLELEHRVNAIQYGRRAGVHRPEEVVP 245
Score = 31.8 bits (63), Expect(3) = 9e-012
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -2 / -1
Query: 142 GDAERLERVVQRAADVLGDE 83
GDAERL+RVV+ DV+ DE
Sbjct: 238 GDAERLKRVVEAPLDVVPDE 179
Score = 23.1 bits (44), Expect(3) = 1e-023
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3 / +3
Query: 15 RAPSTATSARWGSPST 62
RAPS++ RW ST
Sbjct: 12 RAPSSSAPTRWAPAST 59
>gb|BQ664148.1|BQ664148 HV02B02u HV Hordeum vulgare subsp. vulgare cDNA clone HV02B02
3-PRIME, mRNA sequence
Length = 539
Score = 83.1 bits (175), Expect(2) = 8e-023
Identities = 28/61 (45%), Positives = 43/61 (70%)
Frame = +2 / -3
Query: 146 WNSIFWVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSA 325
WN +FW HPG AILD+++ + L+ ++ A+R VLS+YGNM ++F+LDE+R+R
Sbjct: 393 WNDLFWAVHPGSSAILDRIDTVLQLESEKLAASRRVLSDYGNMFGVTIIFVLDELRRRLR 214
Query: 326 E 328
E
Sbjct: 213 E 211
Score = 43.7 bits (89), Expect(2) = 8e-023
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +2 / -3
Query: 359 DWGVLFGFGPGLTVETVVLHS 421
+WGV+ FGPGLTVET+VLH+
Sbjct: 186 EWGVMMTFGPGLTVETMVLHA 124
Score = 37.7 bits (76), Expect(3) = 9e-012
Identities = 23/55 (41%), Positives = 27/55 (49%)
Frame = -3 / +2
Query: 312 RISSRMKRTQALDMLPYSERTWRVARILALSSPTLASTWSRMAGPPGCATQKMEF 148
R SSR +MLP S T R+A + SS + S S MA PGC QK F
Sbjct: 227 RSSSRTNIIVTPNMLP*SLSTRRLAASFSDSSWSTVSMRSSMADEPGCTAQKRSF 391
Score = 36.8 bits (74), Expect(3) = 9e-012
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = -3 / +2
Query: 414 STTVSTVSPGPKPKRTPQSRPSPVVACPSSAER 316
+T VSTVSPGPK TP S P C S R
Sbjct: 131 NTIVSTVSPGPKVIITPHSGTPPTPCCSLSLRR 229
Score = 33.1 bits (66), Expect = 1.8
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = -2 / +1
Query: 307 LVEDEEDAGAGHVAVLGEDVAGGAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVP 146
LVE++ + A HVAV+ E A ++ + ++ ++ G AGV PE+ VP
Sbjct: 232 LVENKYNRHAEHVAVVAEHPAARRQLLRLELEHRVNAIQYGRRAGVHRPEEVVP 393
Score = 31.8 bits (63), Expect(3) = 9e-012
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -2 / +1
Query: 142 GDAERLERVVQRAADVLGDE 83
GDAERL+RVV+ DV+ DE
Sbjct: 400 GDAERLKRVVEAPLDVVPDE 459
>gb|AV930284.1|AV930284 AV930284 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd21m21 3', mRNA sequence
Length = 490
Score = 85.8 bits (181), Expect(3) = 1e-022
Identities = 30/65 (46%), Positives = 45/65 (69%)
Frame = +2 / -1
Query: 143 DWNSIFWVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRS 322
+WN +FW HPG AILD++E + L+ ++ A+R V EYGNM S ++F+LDE R+R
Sbjct: 436 NWNDLFWAVHPGAMAILDKIERVLQLEPGKLAASRTVAREYGNMLSTTIIFVLDEQRRRM 257
Query: 323 AEDGQ 337
E+G+
Sbjct: 256 EEEGE 242
Score = 50.6 bits (104), Expect = 1e-005
Identities = 27/63 (42%), Positives = 32/63 (50%)
Frame = -3 / +3
Query: 333 PSSAERLRISSRMKRTQALDMLPYSERTWRVARILALSSPTLASTWSRMAGPPGCATQKM 154
PSS+ R R SS K L M PYS T R+A S+ S S++A PGC QK
Sbjct: 246 PSSSIRRRCSSSTKMMVVLSMFPYSRATVRLAASFPGSNWRTLSILSKIAIAPGCTAQKR 425
Query: 153 EFQ 145
FQ
Sbjct: 426 SFQ 434
Score = 38.2 bits (77), Expect(3) = 1e-022
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / -1
Query: 347 GEGLDWGVLFGFGPGLTVETVVLHS 421
GE WG + FGPG T+ET+VL +
Sbjct: 247 GEWAQWGAMVAFGPGFTMETMVLQA 173
Score = 21.7 bits (41), Expect(3) = 1e-022
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2 / -1
Query: 95 NIGRALDDAFKPLGI 139
NI + L DAF PLG+
Sbjct: 487 NIKQCLLDAFGPLGM 443
>gb|BU970502.1|BU970502 HB14N08r BC Hordeum vulgare subsp. vulgare cDNA clone HB14N08
5-PRIME, mRNA sequence
Length = 680
Score = 88.6 bits (187), Expect(2) = 2e-022
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +2 / +1
Query: 134 GISDWNSIFWVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMR 313
G WN +FW HPGG ILD ++ + L+ ++ A+RHVL EYGNMS A ++F+LDE+R
Sbjct: 91 GNGKWNDLFWAVHPGGRPILDNIDKVLELEPEKLAASRHVLREYGNMSGATIVFVLDELR 270
Query: 314 KR 319
+R
Sbjct: 271 RR 276
Score = 56.1 bits (116), Expect = 2e-007
Identities = 34/97 (35%), Positives = 41/97 (42%)
Frame = -3 / -1
Query: 369 TPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSERTWRVARILALSSPTLASTWSR 190
TP + S S R R SS A MLPYS T R+A + SS + S SR
Sbjct: 326 TPGPKASMAPHSGSMLRRRRSSSSTNTMVAPLMLPYSRSTCRLAASFSGSSSSTLSMLSR 147
Query: 189 MAGPPGCATQKMEFQSEMPSGLNASSSARPMFLEMSP 79
+ PPGC QK F P + +A P SP
Sbjct: 146 IGRPPGCTAQKRSFHFPFPDNGHGRRAAPPSPSSSSP 36
Score = 36.8 bits (74), Expect(2) = 2e-022
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2 / +1
Query: 359 DWGVLFGFGPGLTVETVVL 415
+WG + FGPG+T+ET+VL
Sbjct: 292 EWGAMLAFGPGVTIETMVL 348
Score = 36.3 bits (73), Expect(2) = 0.001
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = -2 / -3
Query: 319 ALAHLVEDEEDAGAGHVAVLGEDVAGG 239
A A LVE E D GA HVAVL E V G
Sbjct: 276 APAQLVEHEHDGGAAHVAVLPEHVPAG 196
Score = 24.9 bits (48), Expect(2) = 0.001
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 415 EHDGLDGESRAEAEEDAPV 359
EH GLD +S +E + AP+
Sbjct: 348 EHHGLDCDSGSEGQHGAPL 292
>gb|AH014393.1|SEG_AY643842S Hordeum vulgare subsp. vulgare clones BAC 519K7, 799C8, and 122A5
hardness locus region
Length = 302994
Score = 73.9 bits (155), Expect(3) = 3e-022
Identities = 25/59 (42%), Positives = 43/59 (72%)
Frame = +2 / -3
Query: 146 WNSIFWVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRS 322
++ +FW HPGGPAIL ++E ++GLD ++RA+R L ++GN SS ++++L+ M + S
Sbjct: 138184 YDKMFWAVHPGGPAILTKMEGRLGLDGGKLRASRSALRDFGNASSNTIVYVLENMVEES 138008
Score = 38.6 bits (78), Expect(2) = 7e-005
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -3 / +3
Query: 267 PYSERTWRVARILALSSPTLASTWSRMAGPPGCATQKM 154
P S R+AR SSP+ S R+AGPPGC Q +
Sbjct: 138063 PKSRSALRLARSFPPSSPSRPSILVRIAGPPGCTAQNI 138176
Score = 37.3 bits (75), Expect(3) = 3e-022
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2 / -3
Query: 2 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNI 100
LPD+E IDG L E G+ F L +++P +I ++
Sbjct: 138352 LPDTEKTIDGRLTEEGIKFQLGRELPHIIEAHV 138254
Score = 30.9 bits (61), Expect(3) = 3e-022
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2 / -3
Query: 359 DWGVLFGFGPGLTVETVVLHSV 424
+WG++ FGPG+T E ++ ++
Sbjct: 137911 EWGLILAFGPGITFEGILARNL 137846
Score = 30.9 bits (61), Expect = 8.8
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -3 / -1
Query: 390 PGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSERTWRVARILALSSPT 211
P P+P +RP+P SS R ++R + + A P+S + R + SSPT
Sbjct: 138522 PPPRPPWPGSARPAPTGPTTSSGWRSSGTARARPSSAPTRPPWSALSSSSTRRCSASSPT 138343
Score = 27.2 bits (53), Expect(2) = 0.29
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -2 / -2
Query: 187 GGPAGVRHPEDGVPVGDAERLERVVQRAA 101
GG AGVR PVGD R+VQR A
Sbjct: 138767 GGVAGVRRGLGRRPVGDHPPGLRLVQRGA 138681
Score = 26.7 bits (52), Expect(2) = 7e-005
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3 / +3
Query: 78 GTSLSRWKVSPTSRRWPSMAPSESGR 1
G+S W + P+S PSM S SGR
Sbjct: 138276 GSSRPSWNLMPSSVSRPSMVFSVSGR 138353
Score = 25.4 bits (49), Expect(2) = 0.29
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3 / -1
Query: 60 WKVSPTSRRWPSMAPSES 7
W+ S + R WP AP+ +
Sbjct: 138585 WRASASPRAWPRAAPARA 138532
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus
region
Length = 129099
Score = 73.9 bits (155), Expect(3) = 3e-022
Identities = 25/59 (42%), Positives = 43/59 (72%)
Frame = +2 / -2
Query: 146 WNSIFWVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRS 322
++ +FW HPGGPAIL ++E ++GLD ++RA+R L ++GN SS ++++L+ M + S
Sbjct: 125186 YDKMFWAVHPGGPAILTKMEGRLGLDGGKLRASRSALRDFGNASSNTIVYVLENMVEES 125010
Score = 38.6 bits (78), Expect(2) = 7e-005
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -3 / +1
Query: 267 PYSERTWRVARILALSSPTLASTWSRMAGPPGCATQKM 154
P S R+AR SSP+ S R+AGPPGC Q +
Sbjct: 125065 PKSRSALRLARSFPPSSPSRPSILVRIAGPPGCTAQNI 125178
Score = 37.3 bits (75), Expect(3) = 3e-022
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2 / -2
Query: 2 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNI 100
LPD+E IDG L E G+ F L +++P +I ++
Sbjct: 125354 LPDTEKTIDGRLTEEGIKFQLGRELPHIIEAHV 125256
Score = 30.9 bits (61), Expect(3) = 3e-022
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2 / -2
Query: 359 DWGVLFGFGPGLTVETVVLHSV 424
+WG++ FGPG+T E ++ ++
Sbjct: 124913 EWGLILAFGPGITFEGILARNL 124848
Score = 30.9 bits (61), Expect = 8.8
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -3 / -3
Query: 390 PGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSERTWRVARILALSSPT 211
P P+P +RP+P SS R ++R + + A P+S + R + SSPT
Sbjct: 125524 PPPRPPWPGSARPAPTGPTTSSGWRSSGTARARPSSAPTRPPWSALSSSSTRRCSASSPT 125345
Score = 27.2 bits (53), Expect(2) = 0.31
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -2 / -1
Query: 187 GGPAGVRHPEDGVPVGDAERLERVVQRAA 101
GG AGVR PVGD R+VQR A
Sbjct: 125769 GGVAGVRRGLGRRPVGDHPPGLRLVQRGA 125683
Score = 26.7 bits (52), Expect(2) = 7e-005
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3 / +1
Query: 78 GTSLSRWKVSPTSRRWPSMAPSESGR 1
G+S W + P+S PSM S SGR
Sbjct: 125278 GSSRPSWNLMPSSVSRPSMVFSVSGR 125355
Score = 25.4 bits (49), Expect(2) = 0.31
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3 / -3
Query: 60 WKVSPTSRRWPSMAPSES 7
W+ S + R WP AP+ +
Sbjct: 125587 WRASASPRAWPRAAPARA 125534
>gb|AV928786.1|AV928786 AV928786 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd15k21 3', mRNA sequence
Length = 650
Score = 64.3 bits (134), Expect(3) = 1e-019
Identities = 24/48 (50%), Positives = 36/48 (75%)
Frame = +2 / -3
Query: 176 GGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKR 319
GG ILD ++ + L+ ++ A+RHVL EYGNMS A ++F+LDE+R+R
Sbjct: 552 GGRPILDNIDKVLELEPEKLAASRHVLREYGNMSGATIVFVLDELRRR 409
Score = 36.8 bits (74), Expect(3) = 1e-019
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2 / -3
Query: 359 DWGVLFGFGPGLTVETVVL 415
+WG + FGPG+T+ET+VL
Sbjct: 393 EWGAMLAFGPGVTIETMVL 337
Score = 34.1 bits (68), Expect(2) = 0.007
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2 / +1
Query: 319 ALAHLVEDEEDAGAGHVAVLGEDVAGG 239
A A LVE E + GA HVAVL E V G
Sbjct: 409 APAQLVEHEHNGGAAHVAVLPEHVPAG 489
Score = 32.7 bits (65), Expect(3) = 1e-019
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2 / -2
Query: 134 GISDWNSIFWVAHPGGPA 187
G WN +FW HPG P+
Sbjct: 595 GNGKWNDLFWAVHPGRPS 542
Score = 24.9 bits (48), Expect(2) = 0.007
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2 / +1
Query: 415 EHDGLDGESRAEAEEDAPV 359
EH GLD +S +E + AP+
Sbjct: 337 EHHGLDCDSGSEGQHGAPL 393
>gb|BJ458356.1|BJ458356 BJ458356 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31l01 3', mRNA sequence
Length = 294
Score = 96.8 bits (205), Expect = 1e-019
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +2 / -2
Query: 305 EMRKRSAEDGQATTGEGLDWGVLFGFGPGLTVETVVLHSVP 427
EMRKRSAEDG TTGEG+DWGVLFGFGPGLTVETVVLHSVP
Sbjct: 293 EMRKRSAEDGHTTTGEGMDWGVLFGFGPGLTVETVVLHSVP 171
Score = 88.6 bits (187), Expect = 4e-017
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = -3 / +1
Query: 432 VMGTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRIS 304
V GTLW TTVSTV PGPKP RTPQS PSPVV CPSSA+RLRIS
Sbjct: 166 VTGTLWRTTVSTVRPGPKPNRTPQSIPSPVVVCPSSADRLRIS 294
>gb|BI778287.2|BI778287 EBro07_SQ002_M07_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ002_M07 5', mRNA sequence
Length = 651
Score = 76.7 bits (161), Expect(2) = 2e-019
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +2 / +3
Query: 143 DWNSIFWVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMR 313
+WN +FW HPG AILD++E + L+ ++ A+R V EYGNM S ++F+LDE R
Sbjct: 480 NWNDLFWAVHPGAMAILDKIERVLQLEPGKLAASRTVAREYGNMLSTTIIFVLDEQR 650
Score = 43.2 bits (88), Expect = 0.002
Identities = 23/56 (41%), Positives = 27/56 (48%)
Frame = -3 / -3
Query: 312 RISSRMKRTQALDMLPYSERTWRVARILALSSPTLASTWSRMAGPPGCATQKMEFQ 145
R SS K L M PYS T R+A S+ S S++A PGC QK FQ
Sbjct: 649 RCSSSTKMMVVLSMFPYSRATVRLAASFPGSNWRTLSILSKIAIAPGCTAQKRSFQ 482
Score = 38.6 bits (78), Expect(2) = 2e-019
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2 / +3
Query: 2 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGI 139
+PD+ + +R GL ++ +P L++ NI + L DAF PLG+
Sbjct: 336 IPDTLQVVTAEIRTCGLDGNVSTKLPNLVADNIKQCLLDAFGPLGM 473
>gb|U43494.1|HVU43494 Hordeum vulgare chalcone synthase-like protein mRNA, partial cds
Length = 389
Score = 86.8 bits (183), Expect = 1e-016
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = +2 / +1
Query: 155 IFWVAHPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKR 319
+FW HPGG AILD VEA + L+ ++ A+RHVLSEYGNMS V+F+LDE+R+R
Sbjct: 1 LFWAVHPGGRAILDSVEAGLRLEPKKLTASRHVLSEYGNMSGPTVIFVLDEIRRR 165
Score = 50.6 bits (104), Expect = 1e-005
Identities = 27/56 (48%), Positives = 33/56 (58%)
Frame = -3 / -1
Query: 324 AERLRISSRMKRTQALDMLPYSERTWRVARILALSSPTLASTWSRMAGPPGCATQK 157
+ R RISSR K T DM PYS T R+A S+ + AST S++A PPG QK
Sbjct: 170 SRRRRISSRTKMTVGPDMFPYSLSTCRLAVSFLGSNRSPASTLSKIARPPG*TAQK 3
Score = 31.3 bits (62), Expect(2) = 0.002
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2 / -3
Query: 313 AHLVEDEEDAGAGHVAVLGE 254
A LVEDE+D GHV+VL E
Sbjct: 159 ADLVEDEDDCRPGHVSVLTE 100
Score = 29.9 bits (59), Expect(2) = 0.002
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2 / -3
Query: 223 VQPDLGLHLVEDGGPAGVRHPE 158
+QP+ LH V+D PAG+ PE
Sbjct: 69 LQPESRLHTVQDCPPAGMNRPE 4
Score = 26.3 bits (51), Expect(2) = 6.9
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 174 PAGPPSSTRWRPRSGWT 224
PAG S T WR SGW+
Sbjct: 20 PAGGQSWTVWRRDSGWS 70
Score = 22.1 bits (42), Expect(2) = 6.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1 / +3
Query: 262 VRQHVQRLRPLHPRRD 309
VR+HV+ L PRRD
Sbjct: 108 VRKHVRADSHLRPRRD 155
>gb|AJ428909.1|AJ428909 AJ428909 Hordeum vulgare subsp. vulgare primary leaf 7-day old
seedling Hordeum vulgare subsp. vulgare cDNA clone
CE8-7, mRNA sequence
Length = 200
Score = 57.0 bits (118), Expect(2) = 3e-012
Identities = 21/44 (47%), Positives = 33/44 (75%)
Frame = +2 / -2
Query: 188 ILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKR 319
ILD ++ + L+ ++ A+RHVL YGNMS A ++F+LDE+R+R
Sbjct: 199 ILDNIDKVLELEPEKLAASRHVLRGYGNMSGATIVFVLDELRRR 68
Score = 33.1 bits (66), Expect(2) = 3e-012
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 359 DWGVLFGFGPGLTVETV 409
+WG + FGPG+T+ET+
Sbjct: 52 EWGAMLAFGPGVTIETM 2
Score = 33.1 bits (66), Expect = 1.8
Identities = 16/27 (59%), Positives = 16/27 (59%)
Frame = -2 / +2
Query: 319 ALAHLVEDEEDAGAGHVAVLGEDVAGG 239
A A LVE E D GA HVAV E V G
Sbjct: 68 APAQLVEHEHDGGAAHVAVPPEHVPAG 148
>gb|BJ459861.1|BJ459861 BJ459861 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak38i19 3', mRNA sequence
Length = 288
Score = 69.3 bits (145), Expect = 2e-011
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2 / -1
Query: 347 GEGLDWGVLFGFGPGLTVETVVLHSVP 427
GEG+DWGVLFGFGPGLTVETVVLHSVP
Sbjct: 285 GEGMDWGVLFGFGPGLTVETVVLHSVP 205
Score = 66.1 bits (138), Expect = 2e-010
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = -3 / +2
Query: 432 VMGTLWSTTVSTVSPGPKPKRTPQSRPSP 346
VMGTLW TTVSTV PGPKPKRTPQS PSP
Sbjct: 200 VMGTLWRTTVSTVRPGPKPKRTPQSIPSP 286
Score = 35.9 bits (72), Expect = 0.27
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = -2 / +1
Query: 421 AVEHDGLDGESRAEAEEDAPVEALA 347
A+E+D L G++ AEAEE+APV +LA
Sbjct: 211 AMENDRLHGKAGAEAEENAPVHSLA 285
>gb|BQ466496.1|BQ466496 HT02L06r HT Hordeum vulgare subsp. vulgare cDNA clone HT02L06
5-PRIME, mRNA sequence
Length = 640
Score = 43.2 bits (88), Expect(2) = 2e-009
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2 / +2
Query: 143 DWNSIFWVAHPGGPAILDQVEAKVGLDKARMRAT 244
+WN +FWV HPG +LD ++ + L+ ++ A+
Sbjct: 539 EWNDLFWVVHPGSRGVLDHIDMALRLEPKKLAAS 640
Score = 38.2 bits (77), Expect(2) = 2e-009
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2 / +2
Query: 2 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGI 139
+P++E ++ L G+ + ++P ++ NIG+ L DAF PLGI
Sbjct: 395 VPETEHLLNMRLGSGGVCGDVSTELPRMVGHNIGQCLLDAFAPLGI 532
Score = 29.0 bits (57), Expect(2) = 0.14
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3 / -2
Query: 204 STWSRMAGPPGCATQKMEFQS 142
S WS PGC TQK F S
Sbjct: 600 SMWSNTPRLPGCTTQKRSFHS 538
Score = 25.4 bits (49), Expect(2) = 0.14
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3 / -2
Query: 144 SEMPSGLNASSSARPMFLEMSPGTSLSRWKVSP 46
+ +PSG NASS PM G+S+ +P
Sbjct: 537 TRIPSGANASSRHCPMLCPTMRGSSVETSPQTP 439
>gb|CK124929.1|CK124929 BES1824111A1g01 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G0111 5-PRIME, mRNA sequence
Length = 526
Score = 42.8 bits (87), Expect(2) = 2e-009
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2 / +3
Query: 2 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGIS 142
+P++E I L + GL FH+ VP L+ N+ R L DA + +G+S
Sbjct: 324 IPETEDEITMRLMKGGLDFHVSVRVPKLLKSNVERCLIDALESIGVS 464
Score = 38.6 bits (78), Expect(2) = 2e-009
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2 / +3
Query: 146 WNSIFWVAHPGGPAILD 196
WN +FW HPGG AILD
Sbjct: 471 WNDLFWAIHPGGRAILD 521
Score = 30.4 bits (60), Expect(2) = 0.19
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3 / -1
Query: 201 TWSRMAGPPGCATQKMEF 148
TWSR+A PPG QK F
Sbjct: 526 TWSRIARPPGWIAQKRSF 473
Score = 23.5 bits (45), Expect(2) = 0.19
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = -3 / -1
Query: 135 PSGLNASSSARPMFLEMSPGTSLSRWKVSPTSRRWPSMAPSESG 4
P NAS R L S GT WK P ++ S SG
Sbjct: 457 PMDSNASIRQRSTLLFSSFGTRTETWKSRPPFMSRMVISSSVSG 326
>gb|BG417792.1|BG417792 HVSMEk0019I14f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0019I14f, mRNA sequence
Length = 970
Score = 39.1 bits (79), Expect(2) = 3e-007
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +2 / +2
Query: 359 DWGVLFGFGPGLTVETVVLHS 421
+WGVL FGPG+T+E++VL +
Sbjct: 170 EWGVLLAFGPGVTIESIVLRN 232
Score = 35.0 bits (70), Expect(2) = 3e-007
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2 / +2
Query: 260 EYGNMSSACVLFILDEMRKRSAED 331
EY NMS A + F+LDE+R+R ++
Sbjct: 77 EYRNMSGAAIAFVLDELRRRREKE 148
>gb|BJ448866.1|BJ448866 BJ448866 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak21i07 5', mRNA sequence
Length = 452
Score = 51.0 bits (105), Expect = 8e-006
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -3 / -3
Query: 441 APVVMGTLWSTTVSTVSPGPKPK 373
AP +MGTLW TTVSTV PGPKPK
Sbjct: 81 APALMGTLWRTTVSTVRPGPKPK 13
Score = 46.4 bits (95), Expect = 2e-004
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / +2
Query: 374 FGFGPGLTVETVVLHSVP 427
FGFGPGLTVETVVLHSVP
Sbjct: 14 FGFGPGLTVETVVLHSVP 67
>gb|BJ462004.1|BJ462004 BJ462004 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak21i07 3', mRNA sequence
Length = 407
Score = 51.0 bits (105), Expect = 8e-006
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -3 / +2
Query: 441 APVVMGTLWSTTVSTVSPGPKPK 373
AP +MGTLW TTVSTV PGPKPK
Sbjct: 338 APALMGTLWRTTVSTVRPGPKPK 406
Score = 46.4 bits (95), Expect = 2e-004
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / -3
Query: 374 FGFGPGLTVETVVLHSVP 427
FGFGPGLTVETVVLHSVP
Sbjct: 405 FGFGPGLTVETVVLHSVP 352
>gb|BQ468299.1|BQ468299 HP01M24T HP Hordeum vulgare subsp. vulgare cDNA clone HP01M24
5-PRIME, mRNA sequence
Length = 612
Score = 41.8 bits (85), Expect = 0.004
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +2 / +1
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG AI+D+++ +GL ++ A+R L ++GN SS+ + + L
Sbjct: 409 HAGGRAIIDELQKNLGLSDEQVEASRMTLHKFGNTSSSSLWYEL 540
>gb|BQ661914.1|BQ661914 HP01M24w HP Hordeum vulgare subsp. vulgare cDNA clone HP01M24
3-PRIME, mRNA sequence
Length = 640
Score = 41.8 bits (85), Expect = 0.004
Identities = 16/44 (36%), Positives = 29/44 (65%)
Frame = +2 / -2
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG AI+D+++ +GL ++ A+R L ++GN SS+ + + L
Sbjct: 486 HAGGRAIIDELQKNLGLSDEQVEASRMTLHKFGNTSSSSLWYEL 355
>gb|BJ453294.1|BJ453294 BJ453294 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42g19 5', mRNA sequence
Length = 447
Score = 36.8 bits (74), Expect(2) = 0.007
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 359 DWGVLFGFGPGLTVETVVL 415
+WG + FGPG+T+ET+VL
Sbjct: 50 EWGAMLAFGPGVTIETMVL 106
Score = 22.1 bits (42), Expect(2) = 0.007
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = +2 / +2
Query: 287 VLFILDEMRKR 319
++F+LDE+R+R
Sbjct: 2 IVFVLDELRRR 34
>gb|BJ460837.1|BJ460837 BJ460837 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42g19 3', mRNA sequence
Length = 429
Score = 36.8 bits (74), Expect(2) = 0.007
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2 / -2
Query: 359 DWGVLFGFGPGLTVETVVL 415
+WG + FGPG+T+ET+VL
Sbjct: 380 EWGAMLAFGPGVTIETMVL 324
Score = 22.1 bits (42), Expect(2) = 0.007
Identities = 6/11 (54%), Positives = 11/11 (100%)
Frame = +2 / -2
Query: 287 VLFILDEMRKR 319
++F+LDE+R+R
Sbjct: 428 IVFVLDELRRR 396
>gb|BI954437.1|BI954437 HVSMEm0017O17f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0017O17f, mRNA sequence
Length = 709
Score = 29.5 bits (58), Expect(2) = 0.009
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGSP 56
CPTR +P TATS SP
Sbjct: 16 CPTRASPPTATSTTTSSP 69
Score = 29.0 bits (57), Expect(2) = 0.009
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 171 TPAGPPSSTRWRPRSGWT 224
T AGP SS WR +GW+
Sbjct: 163 TRAGPCSSATWRTSAGWS 216
>gb|AV916785.1|AV916785 AV916785 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags19k07 5', mRNA sequence
Length = 567
Score = 40.5 bits (82), Expect = 0.011
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2 / +1
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKR 319
H GG A++D++E + L + A+R L +GN SS+ + + L M +
Sbjct: 148 HAGGRAVIDELEKNLQLQPVHVEASRMTLHRFGNTSSSSIWYELAYMEAK 297
>gb|BF620004.2|BF620004 HVSMEc0009P17f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0009P17f, mRNA sequence
Length = 612
Score = 40.0 bits (81), Expect = 0.015
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2 / -2
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A++D+++ +GL + A+R L +GN SS+ + + L
Sbjct: 461 HAGGRAVIDELQNSLGLSDEHVEASRMALHRFGNTSSSSLWYEL 330
>gb|BG417975.1|BG417975 HVSMEk0020G14f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0020G14f, mRNA sequence
Length = 928
Score = 40.0 bits (81), Expect = 0.015
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2 / -2
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A+L++V+ +GL M A++ L +GN SS+ + + L
Sbjct: 396 HAGGRAVLEEVQRSLGLGDGDMEASKCALHRFGNTSSSSLWYEL 265
>gb|BQ661406.1|BQ661406 HM03F23u HM Hordeum vulgare subsp. vulgare cDNA clone HM03F23
3-PRIME, mRNA sequence
Length = 499
Score = 40.0 bits (81), Expect = 0.015
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2 / -2
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A++D+++ +GL + A+R L +GN SS+ + + L
Sbjct: 447 HAGGRAVIDELQNSLGLSDEHVEASRMALHRFGNTSSSSLWYEL 316
>gb|BE602163.2|BE602163 HVSMEh0102M18f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102M18f, mRNA sequence
Length = 724
Score = 37.3 bits (75), Expect(2) = 0.021
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2 / +3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG AI+D+++ +GL ++ A+R L ++GN S+ + + L
Sbjct: 591 HAGGRAIIDELQKNLGLLDEQVEASRMTLHKFGNTFSSSLWYEL 722
Score = 22.1 bits (42), Expect(2) = 0.021
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3 / +1
Query: 36 SARWGSPSTCSRTCP 80
S+ WGS TC R P
Sbjct: 109 SSPWGSRGTCCRWPP 153
>gb|BI956655.1|BI956655 HVSMEn0004J17f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0004J17f, mRNA sequence
Length = 877
Score = 37.7 bits (76), Expect(2) = 0.025
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / +3
Query: 305 EMRKRSAEDGQATTGEGLDWGVLFGFGPG 391
E R+RS DG+ + G G WGVL G G G
Sbjct: 612 EWRRRSPGDGRGSGGRGAGWGVLRGVGRG 698
Score = 21.7 bits (41), Expect(2) = 0.025
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1 / +2
Query: 73 RARAHLQEHRPRAGR 117
RARAH +EH GR
Sbjct: 29 RARAHGEEHVGGGGR 73
>gb|BQ468862.1|BQ468862 HM02J12r HM Hordeum vulgare subsp. vulgare cDNA clone HM02J12
5-PRIME, mRNA sequence
Length = 459
Score = 38.6 bits (78), Expect = 0.040
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2 / +1
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKR 319
HPGG A+++ V +GL+ + L +GN S++ + ++L M +
Sbjct: 265 HPGGTAVIEAVRKNLGLNSYDVEPAAMTLHRWGNTSASSLWYVLSYMEAK 414
>gb|BI959759.1|BI959759 HVSMEn0021E23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021E23f, mRNA sequence
Length = 673
Score = 29.0 bits (57), Expect(2) = 0.041
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -3 / -3
Query: 237 RILALSSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARPMFLEMSP 79
R+L S P +S+ SR PP + S +P L+ RP+ SP
Sbjct: 641 RMLNASPPPPSSSPSRRRPPPSNPIPRFSLYSLLPPPLSFCRERRPLSTHCSP 483
Score = 27.2 bits (53), Expect(2) = 0.041
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3 / -2
Query: 96 FLEMSPGTSLSRWKVSPTSRRWPSMAP 16
+ +SPGT LSR ++ P S PS P
Sbjct: 396 YCSLSPGTLLSRSRIWPLSA*APSPLP 316
>gb|BQ463225.1|BQ463225 HI04G24r HI Hordeum vulgare subsp. vulgare cDNA clone HI04G24
5-PRIME, mRNA sequence
Length = 281
Score = 26.3 bits (51), Expect(3) = 0.046
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3 / +2
Query: 390 PGPKPKRTPQSRPSPVVACPSSA 322
P P+P P RPSP A S A
Sbjct: 212 PPPRPPPRPAPRPSPCPATASRA 280
Score = 25.4 bits (49), Expect(3) = 0.046
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3 / +1
Query: 450 AVAAPVVMGTLWSTTVSTVSPGPKP 376
A AAP++ L S + S+ SP P P
Sbjct: 148 AAAAPLLPDLLLSPSPSSSSPSPSP 222
Score = 19.4 bits (36), Expect(3) = 0.046
Identities = 5/10 (50%), Positives = 7/10 (70%)
Frame = -3 / +1
Query: 732 TQVYPIPHHP 703
T+ +P P HP
Sbjct: 28 TRTFPTPDHP 57
>gb|BG300823.2|BG300823 HVSMEb0018I18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0018I18f, mRNA sequence
Length = 677
Score = 38.2 bits (77), Expect = 0.055
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2 / +3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A+LD++E + L M +R L +GN SS+ + + L
Sbjct: 159 HAGGRAVLDEIEKNMDLTDWHMEPSRMTLFRFGNTSSSSLWYEL 290
>gb|BG343593.2|BG343593 HVSMEg0006H17f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006H17f, mRNA sequence
Length = 723
Score = 38.2 bits (77), Expect = 0.055
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2 / +3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A+LD++E + L M +R L +GN SS+ + + L
Sbjct: 162 HAGGRAVLDEIEKNMDLTDWHMEPSRMTLFRFGNTSSSSLWYEL 293
>gb|BJ464413.1|BJ464413 BJ464413 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34d11 5', mRNA sequence
Length = 567
Score = 38.2 bits (77), Expect = 0.055
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2 / +3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A+LD++E + L M +R L +GN SS+ + + L
Sbjct: 48 HAGGRAVLDEIEKNMDLTDWHMEPSRMTLFRFGNTSSSSLWYEL 179
>gb|BJ466817.1|BJ466817 BJ466817 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34d11 3', mRNA sequence
Length = 540
Score = 38.2 bits (77), Expect = 0.055
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2 / -1
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A+LD++E + L M +R L +GN SS+ + + L
Sbjct: 498 HAGGRAVLDEIEKNMDLTDWHMEPSRMTLFRFGNTSSSSLWYEL 367
>gb|BM372926.2|BM372926 EBma04_SQ002_G18_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_G18 5', mRNA sequence
Length = 433
Score = 38.2 bits (77), Expect = 0.055
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2 / +3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A+LD++E + L M +R L +GN SS+ + + L
Sbjct: 24 HAGGRAVLDEIEKNMDLTDWHMEPSRMTLFRFGNTSSSSLWYEL 155
>gb|BQ764901.1|BQ764901 EBca01_SQ005_P03_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_P03 5', mRNA sequence
Length = 642
Score = 38.2 bits (77), Expect = 0.055
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2 / +2
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A+LD++E + L M +R L +GN SS+ + + L
Sbjct: 107 HAGGRAVLDEIEKNMDLTDWHMEPSRMTLFRFGNTSSSSLWYEL 238
>gb|BU976866.1|BU976866 HA10H07r HA Hordeum vulgare subsp. vulgare cDNA clone HA10H07
5-PRIME, mRNA sequence
Length = 533
Score = 38.2 bits (77), Expect = 0.055
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2 / +3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A+LD++E + L M +R L +GN SS+ + + L
Sbjct: 282 HAGGRAVLDEIEKNMDLTDWHMEPSRMTLFRFGNTSSSSLWYEL 413
>gb|BU976867.1|BU976867 HA10H07u HA Hordeum vulgare subsp. vulgare cDNA clone HA10H07
3-PRIME, mRNA sequence
Length = 562
Score = 38.2 bits (77), Expect = 0.055
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2 / -2
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A+LD++E + L M +R L +GN SS+ + + L
Sbjct: 510 HAGGRAVLDEIEKNMDLTDWHMEPSRMTLFRFGNTSSSSLWYEL 379
>gb|CB881000.1|CB881000 HM08H15w HM Hordeum vulgare subsp. vulgare cDNA clone HM08H15
3-PRIME, mRNA sequence
Length = 539
Score = 38.2 bits (77), Expect = 0.055
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2 / -3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A+LD++E + L M +R L +GN SS+ + + L
Sbjct: 534 HAGGRAVLDEIEKNMDLTDWHMEPSRMTLFRFGNTSSSSLWYEL 403
>gb|AL505912.1|AL505912 AL505912 Hordeum vulgare Barke roots Hordeum vulgare subsp.
vulgare cDNA clone HW09O06V 5', mRNA sequence
Length = 500
Score = 28.1 bits (55), Expect(2) = 0.056
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 31 CPTRSAPXTATSTTTSS 81
Score = 27.6 bits (54), Expect(2) = 0.056
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 178 TRSGPCSSATWRTSAGWS 231
>gb|BI956747.1|BI956747 HVSMEn0005B17f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005B17f, mRNA sequence
Length = 911
Score = 27.6 bits (54), Expect(2) = 0.073
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 301 TRSGPCSSATWRTXAGWS 354
Score = 27.6 bits (54), Expect(2) = 0.073
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 154 CPTRSAPPTATSTTTSS 204
>gb|BG343155.2|BG343155 HVSMEg0002N12f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0002N12f, mRNA sequence
Length = 823
Score = 30.4 bits (60), Expect(2) = 0.074
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3 / +3
Query: 306 SSRMKRTQALDMLPYSERTWRVARILALSSPTLASTWSRMAGP 178
SSR +R + L S W R + S T+ WSR+A P
Sbjct: 153 SSRRRRLPQVFSLQIS*HKWLTRRTFSPLSVTMELEWSRLASP 281
Score = 24.9 bits (48), Expect(2) = 0.074
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3 / +1
Query: 393 SPGPKPKRTPQSRPS 349
SP P+P+ P SRPS
Sbjct: 64 SPLPRPRTAPISRPS 108
>gb|BM817203.1|BM817203 HC03F09_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC03F09_T3.ab1 similar to Hexaprenyldihydroxybenzoate
methyltransferase,Glycine N-methyltransferase,[Myelin
basic protein]-arginine N-methyltransferase,Glycine
hydroxymethyltransferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 808
Score = 27.6 bits (54), Expect(2) = 0.074
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 216 TRSGPCSSATWRTSAGWS 269
Score = 27.6 bits (54), Expect(2) = 0.074
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +3
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 69 CPTRSAPPTATSTTTSS 119
>gb|BG367758.2|BG367758 HVSMEi0013I23f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0013I23f, mRNA sequence
Length = 710
Score = 27.6 bits (54), Expect(2) = 0.074
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 260 TRSGPCSSATWRTSTGWS 313
Score = 27.6 bits (54), Expect(2) = 0.074
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 113 CPTRSAPPTATSTTTSS 163
>gb|CK123717.1|CK123717 BES1824105c20 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C205 5-PRIME, mRNA sequence
Length = 694
Score = 27.6 bits (54), Expect(2) = 0.075
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 162 TRSGPCSSATWRTSAGWS 215
Score = 27.6 bits (54), Expect(2) = 0.075
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +3
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 15 CPTRSAPPTATSTTTSS 65
>gb|CA030235.1|CA030235 HX06H15r HX Hordeum vulgare subsp. vulgare cDNA clone HX06H15
5-PRIME, mRNA sequence
Length = 641
Score = 30.4 bits (60), Expect(2) = 0.075
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3 / +1
Query: 306 SSRMKRTQALDMLPYSERTWRVARILALSSPTLASTWSRMAGP 178
SSR +R + L S W R + S T+ WSR+A P
Sbjct: 199 SSRRRRLPQVFSLQIS*HKWLTRRTFSPLSVTMELEWSRLASP 327
Score = 24.9 bits (48), Expect(2) = 0.075
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3 / +2
Query: 393 SPGPKPKRTPQSRPS 349
SP P+P+ P SRPS
Sbjct: 110 SPLPRPRTAPISRPS 154
>gb|AV913841.1|AV913841 AV913841 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23h20 5', mRNA sequence
Length = 632
Score = 27.6 bits (54), Expect(2) = 0.075
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 175 TRSGPCSSATWRTSAGWS 228
Score = 27.6 bits (54), Expect(2) = 0.075
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 28 CPTRSAPPTATSTTTSS 78
>gb|CA008746.1|CA008746 HU11P10r HU Hordeum vulgare subsp. vulgare cDNA clone HU11P10
5-PRIME, mRNA sequence
Length = 632
Score = 27.6 bits (54), Expect(2) = 0.075
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 225 TRSGPCSSATWRTSAGWS 278
Score = 27.6 bits (54), Expect(2) = 0.075
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +3
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 78 CPTRSAPPTATSTTTSS 128
>gb|BU994396.1|BU994396 HM06O22r HM Hordeum vulgare subsp. vulgare cDNA clone HM06O22
5-PRIME, mRNA sequence
Length = 616
Score = 27.6 bits (54), Expect(2) = 0.075
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 444 TRSGPCSSATWRTSAGWS 497
Score = 27.6 bits (54), Expect(2) = 0.075
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +3
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 297 CPTRSAPPTATSTTTSS 347
>gb|AL503755.1|AL503755 AL503755 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03F02T 5', mRNA sequence
Length = 614
Score = 27.6 bits (54), Expect(2) = 0.075
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 170 TRSGPCSSATWRTSAGWS 223
Score = 27.6 bits (54), Expect(2) = 0.075
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 23 CPTRSAPPTATSTTTSS 73
>gb|AV924991.1|AV924991 AV924991 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd17m16 5', mRNA sequence
Length = 607
Score = 30.4 bits (60), Expect(2) = 0.075
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3 / +1
Query: 306 SSRMKRTQALDMLPYSERTWRVARILALSSPTLASTWSRMAGP 178
SSR +R + L S W R + S T+ WSR+A P
Sbjct: 139 SSRRRRLPQVFSLQIS*HKWLTLRTFSPLSVTMELEWSRLASP 267
Score = 24.9 bits (48), Expect(2) = 0.075
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3 / +2
Query: 393 SPGPKPKRTPQSRPS 349
SP P+P+ P SRPS
Sbjct: 50 SPLPRPRTAPISRPS 94
>gb|AV913536.1|AV913536 AV913536 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22h01 5', mRNA sequence
Length = 599
Score = 27.6 bits (54), Expect(2) = 0.075
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 353 TRSGPCSSATWRTSAGWS 406
Score = 27.6 bits (54), Expect(2) = 0.075
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 206 CPTRSAPPTATSTTTSS 256
>gb|BJ549243.1|BJ549243 BJ549243 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27f20 5', mRNA sequence
Length = 586
Score = 27.6 bits (54), Expect(2) = 0.075
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 175 TRSGPCSSATWRTSAGWS 228
Score = 27.6 bits (54), Expect(2) = 0.075
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 28 CPTRSAPPTATSTTTSS 78
>gb|AV834193.1|AV834193 AV834193 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp.
vulgare cDNA clone bags6g14, mRNA sequence
Length = 665
Score = 37.7 bits (76), Expect = 0.075
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2 / -3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A+LD +E + L M +R L+ +GN SS+ + + L
Sbjct: 447 HAGGRAVLDTIEKNLELSDWHMEPSRMTLNRWGNTSSSSLWYEL 316
>gb|CA006830.1|CA006830 HU05N04r HU Hordeum vulgare subsp. vulgare cDNA clone HU05N04
5-PRIME, mRNA sequence
Length = 555
Score = 27.6 bits (54), Expect(2) = 0.076
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 179 TRSGPCSSATWRTSAGWS 232
Score = 27.6 bits (54), Expect(2) = 0.076
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 32 CPTRSAPPTATSTTTSS 82
>gb|AV925013.1|AV925013 AV925013 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd17o18 5', mRNA sequence
Length = 535
Score = 30.4 bits (60), Expect(2) = 0.076
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3 / +1
Query: 306 SSRMKRTQALDMLPYSERTWRVARILALSSPTLASTWSRMAGP 178
SSR +R + L S W R + S T+ WSR+A P
Sbjct: 139 SSRRRRLPQVFSLQIS*HKWLTLRTFSPLSVTMELEWSRLASP 267
Score = 24.9 bits (48), Expect(2) = 0.076
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3 / +2
Query: 393 SPGPKPKRTPQSRPS 349
SP P+P+ P SRPS
Sbjct: 50 SPLPRPRTAPISRPS 94
>gb|BQ458627.1|BQ458627 HA04K19r HA Hordeum vulgare subsp. vulgare cDNA clone HA04K19
5-PRIME, mRNA sequence
Length = 520
Score = 27.6 bits (54), Expect(2) = 0.076
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 351 TRSGPCSSATWRTSAGWS 404
Score = 27.6 bits (54), Expect(2) = 0.076
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +3
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 204 CPTRSAPPTATSTTTSS 254
>gb|CA025338.1|CA025338 HZ51N12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51N12
5-PRIME, mRNA sequence
Length = 516
Score = 27.6 bits (54), Expect(2) = 0.076
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 179 TRSGPCSSATWRTSAGWS 232
Score = 27.6 bits (54), Expect(2) = 0.076
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 32 CPTRSAPPTATSTTTSS 82
>gb|BE519721.1|BE519721 HV_CEb0018M20f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0018M20f, mRNA sequence
Length = 515
Score = 27.6 bits (54), Expect(2) = 0.076
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 433 TRSGPCSSATWRTSAGWS 486
Score = 27.6 bits (54), Expect(2) = 0.076
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 286 CPTRSAPPTATSTTTSS 336
>gb|BU993949.1|BU993949 HM05B13r HM Hordeum vulgare subsp. vulgare cDNA clone HM05B13
5-PRIME, mRNA sequence
Length = 514
Score = 27.6 bits (54), Expect(2) = 0.076
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 339 TRSGPCSSATWRTSAGWS 392
Score = 27.6 bits (54), Expect(2) = 0.076
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +3
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 192 CPTRSAPPTATSTTTSS 242
>gb|BM368405.2|BM368405 EBem08_SQ002_C01_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ002_C01 5', mRNA sequence
Length = 458
Score = 27.6 bits (54), Expect(2) = 0.076
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 215 TRSGPCSSATWRTSAGWS 268
Score = 27.6 bits (54), Expect(2) = 0.076
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 68 CPTRSAPPTATSTTTSS 118
>gb|AJ463600.1|AJ463600 AJ463600 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200039E05F1, mRNA sequence
Length = 420
Score = 27.6 bits (54), Expect(2) = 0.077
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 258 TRSGPCSSATWRTSAGWS 311
Score = 27.6 bits (54), Expect(2) = 0.077
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +3
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 111 CPTRSAPPTATSTTTSS 161
>gb|CA021570.1|CA021570 HZ40H16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ40H16
5-PRIME, mRNA sequence
Length = 413
Score = 27.6 bits (54), Expect(2) = 0.077
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 166 TRSGPCSSATWRTSAGWS 219
Score = 27.6 bits (54), Expect(2) = 0.077
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 19 CPTRSAPPTATSTTTSS 69
>gb|BQ768237.1|BQ768237 EBro08_SQ011_K03_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_K03 5', mRNA sequence
Length = 402
Score = 27.6 bits (54), Expect(2) = 0.077
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 250 TRSGPCSSATWRTSAGWS 303
Score = 27.6 bits (54), Expect(2) = 0.077
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 103 CPTRSAPPTATSTTTSS 153
>gb|CA007816.1|CA007816 HU09B12r HU Hordeum vulgare subsp. vulgare cDNA clone HU09B12
5-PRIME, mRNA sequence
Length = 397
Score = 27.6 bits (54), Expect(2) = 0.077
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 172 TRSGPCSSATWRTSAGWS 225
Score = 27.6 bits (54), Expect(2) = 0.077
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 25 CPTRSAPPTATSTTTSS 75
>gb|CK124940.1|CK124940 BES1824111A2b07 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B0711 5-PRIME, mRNA sequence
Length = 368
Score = 27.6 bits (54), Expect(2) = 0.077
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 194 TRSGPCSSATWRTSAGWS 247
Score = 27.6 bits (54), Expect(2) = 0.077
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 47 CPTRSAPPTATSTTTSS 97
>gb|AL505137.1|AL505137 AL505137 Hordeum vulgare Barke roots Hordeum vulgare subsp.
vulgare cDNA clone HW07I07V 5', mRNA sequence
Length = 700
Score = 27.6 bits (54), Expect(2) = 0.10
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 37 CPTRSAPPTATSTTTSS 87
Score = 27.2 bits (53), Expect(2) = 0.10
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3 / +1
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR GW+
Sbjct: 184 TRSGPCSSATWRTSXGWS 237
>gb|BF627459.2|BF627459 HVSMEb0004O16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004O16f, mRNA sequence
Length = 842
Score = 37.3 bits (75), Expect = 0.10
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2 / +2
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A+L++V+ + L+ M +R L +GN SS+ + + L
Sbjct: 257 HAGGRAVLEEVQRSLSLEDKDMEPSRCALHRFGNTSSSSLWYEL 388
Score = 31.3 bits (62), Expect = 6.4
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2 / -2
Query: 289 DAGAGHVAVLGEDVAGGAHPGLVQPDLGLHLVEDGGPAGV 170
+ A VA + G H ++Q LHL++ G PAGV
Sbjct: 376 ERAAAGVAEAVQGAPAGLHVLVLQAQAALHLLQHGAPAGV 257
>gb|BG309191.1|BG309191 HVSMEc0004M06f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0004M06f, mRNA sequence
Length = 823
Score = 37.3 bits (75), Expect = 0.10
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2 / +3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A++D+++ +GL + A+R L +GN S+ + + L
Sbjct: 435 HAGGRAVIDELQNSLGLSDEHVEASRMALHRFGNTFSSSLWYEL 566
>gb|BI956558.1|BI956558 HVSMEn0004C04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0004C04f, mRNA sequence
Length = 910
Score = 29.0 bits (57), Expect(2) = 0.12
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2 / -1
Query: 241 GAHPGLVQPDLGLHLVEDGGPAGV 170
G H ++Q LHL++ G PAGV
Sbjct: 517 GLHALVLQVQAALHLLQPGAPAGV 446
Score = 28.1 bits (55), Expect(2) = 0.12
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3 / -2
Query: 384 PKPKRTPQSRPSPVVACPSSAERLR 310
P+P+ +P RP+P CP+ R
Sbjct: 891 PRPRPSPPRRPTPPPPCPAPVPTAR 817
>gb|BI947637.1|BI947637 HVSMEl0006D09f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0006D09f, mRNA sequence
Length = 818
Score = 36.8 bits (74), Expect = 0.14
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2 / +3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A++D+++ + L + A+R L +GN SS+ + + L
Sbjct: 189 HAGGRAVIDELQKNLELSPRHVEASRMTLHRFGNTSSSSLWYEL 320
>gb|BI952395.1|BI952395 HVSMEm0006D09f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0006D09f, mRNA sequence
Length = 816
Score = 36.8 bits (74), Expect = 0.14
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2 / +2
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A++D+++ + L + A+R L +GN SS+ + + L
Sbjct: 188 HAGGRAVIDELQKNLELSPRHVEASRMTLHRFGNTSSSSLWYEL 319
>gb|BI952556.1|BI952556 HVSMEm0006P01f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0006P01f, mRNA sequence
Length = 855
Score = 36.8 bits (74), Expect = 0.14
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -3 / -2
Query: 450 AVAAPVVMGTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAER 316
A+ P TV +P P+P RTP S P P CP+ R
Sbjct: 581 ALRRPTARSDRRPPTVPASAPAPRPXRTPLSPPXPPRPCPTPPPR 447
>gb|BI957924.1|BI957924 HVSMEn0012D09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0012D09f, mRNA sequence
Length = 452
Score = 36.8 bits (74), Expect = 0.14
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2 / +3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A++D+++ + L + A+R L +GN SS+ + + L
Sbjct: 189 HAGGRAVIDELQKNLELSPRHVEASRMTLHRFGNTSSSSLWYEL 320
>gb|BE214460.3|BE214460 HV_CEb0003I09f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003I09f, mRNA sequence
Length = 702
Score = 36.8 bits (74), Expect = 0.14
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2 / -3
Query: 364 PVEALARGGLSVLGGALAHLVEDEEDAG 281
PV+AL R G + G + HLVEDE+D G
Sbjct: 676 PVKALERAGPAAEGAPVLHLVEDEQDDG 593
>gb|BQ468760.1|BQ468760 HM02D23r HM Hordeum vulgare subsp. vulgare cDNA clone HM02D23
5-PRIME, mRNA sequence
Length = 276
Score = 36.8 bits (74), Expect = 0.14
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2 / +2
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A++D+++ + L + A+R L +GN SS+ + + L
Sbjct: 80 HAGGRAVIDELQKNLELSPRHVEASRMTLHRFGNTSSSSLWYEL 211
>gb|BU974346.1|BU974346 HB27K07r BC Hordeum vulgare subsp. vulgare cDNA clone HB27K07
5-PRIME, mRNA sequence
Length = 489
Score = 36.8 bits (74), Expect = 0.14
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2 / +3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A++D+++ + L + A+R L +GN SS+ + + L
Sbjct: 198 HAGGRAVIDELQKNLELSPRHVEASRMTLHRFGNTSSSSLWYEL 329
>gb|BU994029.1|BU994029 HM05H03r HM Hordeum vulgare subsp. vulgare cDNA clone HM05H03
5-PRIME, mRNA sequence
Length = 575
Score = 36.8 bits (74), Expect = 0.14
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2 / +2
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A++D+++ + L + A+R L +GN SS+ + + L
Sbjct: 35 HAGGRAVIDELQKNLELSPRHVEASRMTLHRFGNTSSSSLWYEL 166
>gb|BU998485.1|BU998485 HI11D12r HI Hordeum vulgare subsp. vulgare cDNA clone HI11D12
5-PRIME, mRNA sequence
Length = 628
Score = 36.8 bits (74), Expect = 0.14
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2 / +1
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A++D+++ + L + A+R L +GN SS+ + + L
Sbjct: 337 HAGGRAVIDELQKNLELSPRHVEASRMTLHRFGNTSSSSLWYEL 468
>gb|CB859675.1|CB859675 HI11D12w HI Hordeum vulgare subsp. vulgare cDNA clone HI11D12
3-PRIME, mRNA sequence
Length = 538
Score = 36.8 bits (74), Expect = 0.14
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2 / -3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A++D+++ + L + A+R L +GN SS+ + + L
Sbjct: 524 HAGGRAVIDELQKNLELSPRHVEASRMTLHRFGNTSSSSLWYEL 393
>gb|CB878869.1|CB878869 HP10B13T HP Hordeum vulgare subsp. vulgare cDNA clone HP10B13
5-PRIME, mRNA sequence
Length = 531
Score = 36.8 bits (74), Expect = 0.14
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2 / +1
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A++D+++ + L + A+R L +GN SS+ + + L
Sbjct: 61 HAGGRAVIDELQKNLELSPRHVEASRMTLHRFGNTSSSSLWYEL 192
>gb|CB880684.1|CB880684 HM07H03w HM Hordeum vulgare subsp. vulgare cDNA clone HM07H03
3-PRIME, mRNA sequence
Length = 546
Score = 36.8 bits (74), Expect = 0.14
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2 / -2
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A++D+++ + L + A+R L +GN SS+ + + L
Sbjct: 542 HAGGRAVIDELQKNLELSPRHVEASRMTLHRFGNTSSSSLWYEL 411
>gb|BG416383.2|BG416383 HVSMEk0011O16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0011O16f, mRNA sequence
Length = 1042
Score = 27.6 bits (54), Expect(2) = 0.18
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3 / +2
Query: 171 TPAGPPSSTRWRPRSGWT 224
T +GP SS WR +GW+
Sbjct: 149 TRSGPCSSATWRTSAGWS 202
Score = 26.3 bits (51), Expect(2) = 0.18
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 3 CPTRRAPSTATSARWGS 53
CPT+ AP TATS S
Sbjct: 2 CPTKSAPPTATSTTTSS 52
>gb|BE519695.1|BE519695 HV_CEb0018I12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0018I12f, mRNA sequence
Length = 523
Score = 31.3 bits (62), Expect(2) = 0.19
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +3 / +3
Query: 24 STATSARWGSPSTCS 68
ST++S+RWG PS+CS
Sbjct: 213 STSSSSRWGPPSSCS 257
Score = 22.6 bits (43), Expect(2) = 0.19
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3 / +3
Query: 168 RTPAGPPSSTRWRPRSGWTR 227
R P+GPP S P S T+
Sbjct: 273 RAPSGPPPSPTRSPASTCTK 332
>gb|BF619909.2|BF619909 HVSMEc0009K12f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0009K12f, mRNA sequence
Length = 589
Score = 36.3 bits (73), Expect = 0.20
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3 / +3
Query: 426 GTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSS 325
GT ST+ S SP P P P SRPS A +S
Sbjct: 384 GTAASTSASAASPSPPPSPPPPSRPSSPAAATAS 485
>gb|BE214055.2|BE214055 HV_CEb0002A22f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002A22f, mRNA sequence
Length = 707
Score = 28.1 bits (55), Expect(2) = 0.22
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2 / +3
Query: 268 AVLGEDVAGGAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVP 146
A LG D+ G H L++ D G + PE+GVP
Sbjct: 270 ARLGADMEGATHAPLLRSDGVAEACPSGAAREGQVPEEGVP 392
Score = 27.6 bits (54), Expect(2) = 0.22
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3 / +2
Query: 87 MSPGTSLSRWKVSPTSRRWPSMAP 16
+S G S K P +R+WP +AP
Sbjct: 605 LSGGAKKSP*KAPPPARKWPRLAP 676
>gb|BG343722.1|BG343722 HVSMEg0006J05f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006J05f, mRNA sequence
Length = 953
Score = 25.4 bits (49), Expect(3) = 0.23
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3 / -2
Query: 378 PKRTPQSRPSPVVACPSSAERLRISSRM 295
P+R P P+PV S AE SSR+
Sbjct: 154 PRRCPPPPPAPVPPPSSGAEVRSASSRL 71
Score = 24.4 bits (47), Expect(3) = 0.23
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2 / -3
Query: 751 NQPSLSYTGIPNTSPPHAC 695
+ PSLS P SPPH C
Sbjct: 894 SSPSLSPPWPPLISPPHYC 838
Score = 23.5 bits (45), Expect(3) = 0.23
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -2 / -1
Query: 415 EHDGLDGESRAEAEE 371
EHDG DG+ R EE
Sbjct: 365 EHDGGDGDERDVPEE 321
>gb|BQ763891.1|BQ763891 EBro03_SQ005_N16_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_N16 5', mRNA sequence
Length = 666
Score = 28.6 bits (56), Expect(2) = 0.25
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3 / +3
Query: 177 AGPPSSTRWRPRSGWTRP 230
A PP +RWR R W RP
Sbjct: 54 ASPPWRSRWRRRLSW*RP 107
Score = 24.9 bits (48), Expect(2) = 0.25
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1 / +1
Query: 238 RHPPRPLRVRQHVQRLRPL 294
R P R +H+QRLRPL
Sbjct: 121 RPPERRRGTHRHLQRLRPL 177
>gb|BJ446894.1|BJ446894 BJ446894 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak15e05 5', mRNA sequence
Length = 632
Score = 26.7 bits (52), Expect(2) = 0.25
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2 / -3
Query: 178 AGVRHPEDGVPVGDAER 128
AGV EDGV VG AER
Sbjct: 90 AGVAGGEDGVEVGGAER 40
Score = 26.7 bits (52), Expect(2) = 0.25
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 259 GEDVAGGAHPGLVQPDLGLHLVEDGGPAG 173
GE+VA G+V P G+H ++ G AG
Sbjct: 162 GEEVAHLGGAGVVHPHGGVHELDAAGVAG 76
>gb|BQ760651.1|BQ760651 EBro03_SQ003_B13_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ003_B13 5', mRNA sequence
Length = 584
Score = 30.4 bits (60), Expect(2) = 0.25
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -2 / -3
Query: 283 GAGHVAVLGEDVAGGAHPGLVQPDLGLHLVEDGGPAGV 170
GAGH+AV+G V A ++ +L L +E+G PA +
Sbjct: 261 GAGHLAVVGSRVVEVAAHLWLRDELLLCEIEEGPPAAI 148
Score = 24.9 bits (48), Expect(2) = 0.25
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3 / -2
Query: 384 PKPKRTPQSRPSP 346
P P+R PQ+ PSP
Sbjct: 472 PGPRRRPQAAPSP 434
>gb|CV057314.1|CV057314 BNEL26d5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL26d5 5' similar to putative 60S
ribosomal protein L1, mRNA sequence
Length = 544
Score = 35.9 bits (72), Expect = 0.27
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3 / +2
Query: 426 GTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSS 325
GT ST+ S SP P P P SRPS A +S
Sbjct: 395 GTAASTSASAASPSPPPSPXPXSRPSSPPAATAS 496
>gb|BE421257.1|BE421257 HWM007.D10 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM007.D10, mRNA sequence
Length = 816
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -2
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSA 106
WSR+ G GC+T + MP GL+ S+A
Sbjct: 266 WSRLTGSTGCSTGLNSMPTSMPCGLSPGSAA 174
>gb|BF256515.2|BF256515 HVSMEf0010D07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010D07f, mRNA sequence
Length = 845
Score = 35.4 bits (71), Expect = 0.37
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3 / +3
Query: 426 GTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSS 325
GT ST+ S SP P P P SRPS A +S
Sbjct: 369 GTAASTSASAASPSPPPSPPPPSRPSSPPAATAS 470
>gb|BF257815.2|BF257815 HVSMEf0013O15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0013O15f, mRNA sequence
Length = 525
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -2
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSA 106
WSR+ G GC+T + MP GL+ S+A
Sbjct: 299 WSRLTGSTGCSTGLNSMPTSMPCGLSPGSAA 207
>gb|BG367783.1|BG367783 HVSMEi0013K12f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0013K12f, mRNA sequence
Length = 549
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -3
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSA 106
WSR+ G GC+T + MP GL+ S+A
Sbjct: 262 WSRLTGSTGCSTGLNSMPTSMPCGLSPGSAA 170
>gb|BI954935.1|BI954935 HVSMEm0020H24f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0020H24f, mRNA sequence
Length = 657
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -3
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSA 106
WSR+ G GC+T + MP GL+ S+A
Sbjct: 115 WSRLTGSTGCSTGLNSMPTSMPCGLSPGSAA 23
>gb|BE215705.1|BE215705 HV_CEb0008E08f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0008E08f, mRNA sequence
Length = 507
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -2
Query: 12 RRAPSTATSARWGSPSTCSRTCPG 83
RR PS + S+ WG PS CS C G
Sbjct: 188 RRGPSASYSSCWGCPSPCSCACGG 117
>gb|BE216245.1|BE216245 HV_CEb0009P13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009P13f, mRNA sequence
Length = 569
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -1
Query: 12 RRAPSTATSARWGSPSTCSRTCPG 83
RR PS + S+ WG PS CS C G
Sbjct: 188 RRGPSASYSSCWGCPSPCSCACGG 117
>gb|BG415526.1|BG415526 HVSMEk0006N09f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0006N09f, mRNA sequence
Length = 654
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -3
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSA 106
WSR+ G GC+T + MP GL+ S+A
Sbjct: 262 WSRLTGSTGCSTGLNSMPTSMPCGLSPGSAA 170
>gb|BG300486.2|BG300486 HVSMEb0017D18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017D18f, mRNA sequence
Length = 692
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -1
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSA 106
WSR+ G GC+T + MP GL+ S+A
Sbjct: 206 WSRLTGSTGCSTGLNSMPTSMPCGLSPGSAA 114
>gb|BF256288.3|BF256288 HVSMEf0009M02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0009M02f, mRNA sequence
Length = 769
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -3
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSA 106
WSR+ G GC+T + MP GL+ S+A
Sbjct: 251 WSRLTGSTGCSTGLNSMPTSMPCGLSPGSAA 159
>gb|BF260321.3|BF260321 HVSMEf0021L01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021L01f, mRNA sequence
Length = 848
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -1
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSA 106
WSR+ G GC+T + MP GL+ S+A
Sbjct: 266 WSRLTGSTGCSTGLNSMPTSMPCGLSPGSAA 174
>gb|BF260459.3|BF260459 HVSMEf0022A19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022A19f, mRNA sequence
Length = 539
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -3
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSA 106
WSR+ G GC+T + MP GL+ S+A
Sbjct: 309 WSRLTGSTGCSTGLNSMPTSMPCGLSPGSAA 217
>gb|BG343281.2|BG343281 HVSMEg0005E22f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005E22f, mRNA sequence
Length = 917
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -2
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSA 106
WSR+ G GC+T + MP GL+ S+A
Sbjct: 274 WSRLTGSTGCSTGLNSMPTSMPCGLSPGSAA 182
>gb|BE193517.3|BE193517 HVSMEh0081G15f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0081G15f, mRNA sequence
Length = 764
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -2
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSA 106
WSR+ G GC+T + MP GL+ S+A
Sbjct: 259 WSRLTGSTGCSTGLNSMPTSMPCGLSPGSAA 167
>gb|BM816052.1|BM816052 HB01D09_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01D09_T3.ab1 similar to Citrate
(si)-synthase,Icosanoyl-CoA synthase,Fatty-acyl-CoA
synthase,Fatty-acid
synthase,4-alpha-glucanotransferase,Myelin-proteolipid
O-palmitoyltransferase,, mRNA sequence
Length = 819
Score = 35.4 bits (71), Expect = 0.37
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2 / +3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG A++D+++ + L + A R L +GN SS+ + + L
Sbjct: 474 HAGGRAVIDELQKNLELSPRHVEAWRMTLHRFGNTSSSSLWYKL 605
>gb|BM817088.1|BM817088 HC110D10_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC110D10_T3.ab1 similar to (AC079041) unknown protein
[Arabidopsis thaliana]
gi|12321465|gb|AAG50790.1|AC074309_7 (AC074309) unknown
protein [Arabidopsis thaliana],, mRNA sequence
Length = 828
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -2
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSA 106
WSR+ G GC+T + MP GL+ S+A
Sbjct: 284 WSRLTGSTGCSTGLNSMPTSMPCGLSPGSAA 192
>gb|BQ458611.1|BQ458611 HA04L17r HA Hordeum vulgare subsp. vulgare cDNA clone HA04L17
5-PRIME, mRNA sequence
Length = 661
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -1
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSA 106
WSR+ G GC+T + MP GL+ S+A
Sbjct: 277 WSRLTGSTGCSTGLNSMPTSMPCGLSPGSAA 185
>gb|BQ459408.1|BQ459408 HA01C16r HA Hordeum vulgare subsp. vulgare cDNA clone HA01C16
5-PRIME, mRNA sequence
Length = 539
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -2
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSA 106
WSR+ G GC+T + MP GL+ S+A
Sbjct: 277 WSRLTGSTGCSTGLNSMPTSMPCGLSPGSAA 185
>gb|BQ466076.1|BQ466076 HT01I04T HT Hordeum vulgare subsp. vulgare cDNA clone HT01I04
5-PRIME, mRNA sequence
Length = 700
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -2
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSA 106
WSR+ G GC+T + MP GL+ S+A
Sbjct: 300 WSRLTGSTGCSTGLNSMPTSMPCGLSPGSAA 208
>gb|BQ466838.1|BQ466838 HS01L21T HS Hordeum vulgare subsp. vulgare cDNA clone HS01L21
5-PRIME, mRNA sequence
Length = 661
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -1
Query: 12 RRAPSTATSARWGSPSTCSRTCPG 83
RR PS + S+ WG PS CS C G
Sbjct: 214 RRGPSASYSSCWGCPSPCSCACGG 143
>gb|BQ467138.1|BQ467138 HS02L21r HS Hordeum vulgare subsp. vulgare cDNA clone HS02L21
5-PRIME, mRNA sequence
Length = 402
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -3
Query: 12 RRAPSTATSARWGSPSTCSRTCPG 83
RR PS + S+ WG PS CS C G
Sbjct: 214 RRGPSASYSSCWGCPSPCSCACGG 143
>gb|BU982647.1|BU982647 HA27D01r HA Hordeum vulgare subsp. vulgare cDNA clone HA27D01
5-PRIME, mRNA sequence
Length = 550
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -1
Query: 12 RRAPSTATSARWGSPSTCSRTCPG 83
RR PS + S+ WG PS CS C G
Sbjct: 223 RRGPSASYSSCWGCPSPCSCACGG 152
>gb|CA003308.1|CA003308 HS14A09r HS Hordeum vulgare subsp. vulgare cDNA clone HS14A09
5-PRIME, mRNA sequence
Length = 409
Score = 35.4 bits (71), Expect = 0.37
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -3
Query: 12 RRAPSTATSARWGSPSTCSRTCPG 83
RR PS + S+ WG PS CS C G
Sbjct: 221 RRGPSASYSSCWGCPSPCSCACGG 150
>gb|CV053591.1|CV053591 BNEL101a10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL101a10 5' similar to putative 60S
ribosomal protein L4/L1, mRNA sequence
Length = 712
Score = 35.4 bits (71), Expect = 0.37
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3 / +3
Query: 426 GTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSS 325
GT ST+ S SP P P P SRPS A +S
Sbjct: 78 GTAASTSASAASPSPPPSPPPPSRPSSPPAATAS 179
>gb|CV054709.1|CV054709 BNEL112d7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL112d7 5' similar to putative 60S
ribosomal protein L4/L1, mRNA sequence
Length = 704
Score = 35.4 bits (71), Expect = 0.37
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3 / +3
Query: 426 GTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSS 325
GT ST+ S SP P P P SRPS A +S
Sbjct: 78 GTAASTSASAASPSPPPSPPPPSRPSSPPAATAS 179
>gb|CV057863.1|CV057863 BNEL31f5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL31f5 5' similar to putative 60S
ribosomal protein L4/L1, mRNA sequence
Length = 613
Score = 35.4 bits (71), Expect = 0.37
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3 / +3
Query: 426 GTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSS 325
GT ST+ S SP P P P SRPS A +S
Sbjct: 78 GTAASTSASAASPSPPPSPPPPSRPSSPPAATAS 179
>gb|CV058082.1|CV058082 BNEL34b3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL34b3 5' similar to putative 60S
ribosomal protein L4/L1, mRNA sequence
Length = 632
Score = 35.4 bits (71), Expect = 0.37
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3 / +3
Query: 426 GTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSS 325
GT ST+ S SP P P P SRPS A +S
Sbjct: 150 GTAASTSASAASPSPPPSPPPASRPSSPPAATAS 251
>gb|CV062394.1|CV062394 BNEL79e9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL79e9 5' similar to putative 60S
ribosomal protein L4/L1, mRNA sequence
Length = 704
Score = 35.4 bits (71), Expect = 0.37
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3 / +3
Query: 426 GTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSS 325
GT ST+ S SP P P P SRPS A +S
Sbjct: 78 GTAASTSASAASPSPPPSPPPPSRPSSPPAATAS 179
>gb|CV062972.1|CV062972 BNEL85b8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL85b8 5' similar to Oryza sativa,
mRNA sequence
Length = 755
Score = 35.4 bits (71), Expect = 0.37
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3 / +1
Query: 426 GTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSS 325
GT ST+ S SP P P P SRPS A +S
Sbjct: 358 GTAASTSASAASPSPPPSPPPPSRPSSPPAATAS 459
>gb|CV063889.1|CV063889 BNEL94c6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL94c6 5' similar to putative 60S
ribosomal protein L4/L1, mRNA sequence
Length = 662
Score = 35.4 bits (71), Expect = 0.37
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3 / +3
Query: 426 GTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSS 325
GT ST+ S SP P P P SRPS A +S
Sbjct: 78 GTAASTSASAASPSPPPSPPPPSRPSSPPAATAS 179
>gb|BI955664.1|BI955664 HVSMEm0023P09f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0023P09f, mRNA sequence
Length = 621
Score = 28.1 bits (55), Expect(2) = 0.49
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -3 / -3
Query: 147 QSEMPSGLNASSSARPMFLEMSPGT 73
+S P G SSSARP LE P T
Sbjct: 364 RSPSPPGSRPSSSARPSVLECPPRT 290
Score = 26.3 bits (51), Expect(2) = 0.49
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -3 / -2
Query: 390 PGPKPKRTPQSRPSPVVACPSSAERLRISSR 298
P P P P RP P PSS L + R
Sbjct: 599 PSPPPPPPPPPRPPPAPLPPSSPPPLAAAPR 507
>gb|AV925997.1|AV925997 AV925997 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basdk21 5', mRNA sequence
Length = 621
Score = 35.0 bits (70), Expect = 0.51
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2 / +1
Query: 134 GISDWNSIFWVAHPGGPAIL 193
G WN +FW HPGG IL
Sbjct: 562 GNGKWNDLFWAVHPGGRPIL 621
>gb|BQ759036.1|BQ759036 EBma07_SQ003_G17_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ003_G17 5', mRNA sequence
Length = 391
Score = 31.8 bits (63), Expect(2) = 0.56
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3 / +3
Query: 432 VMGTLWSTTVSTVSPGPKPKRTPQSRPSPV 343
+M T+ S T ++ P P P P RPSP+
Sbjct: 57 MMATVGSDTAPSLRPHPSPPAPPLQRPSPL 146
Score = 21.7 bits (41), Expect(2) = 0.56
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -3 / +2
Query: 255 RTWRVARILALSSPTLASTW 196
R WR+ + + LA+TW
Sbjct: 260 RRWRIPPPMTATPTRLATTW 319
>gb|BE421311.1|BE421311 HWM008.A04 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM008.A04, mRNA sequence
Length = 1353
Score = 26.3 bits (51), Expect(2) = 0.58
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2 / -1
Query: 184 GPAGVRHPEDGVPVGDAERLERV 116
G G R DGV G+ ER ERV
Sbjct: 1215 GGCGAREWGDGVESGEEERRERV 1147
Score = 25.8 bits (50), Expect(2) = 0.58
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -2 / -3
Query: 343 GGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAGG 239
GGL+ GGA VE++E+ AG + A G
Sbjct: 1318 GGLATRGGAEGGGVEEQEERRAGGAGLARAREAAG 1214
>gb|BF065323.1|BF065323 HV_CEb0012B24f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012B24f, mRNA sequence
Length = 560
Score = 27.6 bits (54), Expect(2) = 0.62
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGS 53
CPTR AP TATS S
Sbjct: 280 CPTRSAPPTATSTTTSS 330
Score = 24.4 bits (47), Expect(2) = 0.62
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3 / +1
Query: 171 TPAGPPSSTRWRPRSGWT 224
T + P SS WR +GW+
Sbjct: 427 TRSXPCSSATWRTSTGWS 480
>gb|BE215353.2|BE215353 HV_CEb0006J02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006J02f, mRNA sequence
Length = 475
Score = 29.0 bits (57), Expect(2) = 0.68
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2 / -3
Query: 184 GPAGVRHPEDGVPVGDAERLERVVQRAADVLGD 86
G V HP D VP DA V +V+GD
Sbjct: 374 GDTDVLHPGDAVPESDAFEHPEVASVCVEVVGD 276
Score = 24.4 bits (47), Expect(2) = 0.68
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3 / -1
Query: 414 STTVSTVSPGPKPKRTPQSRPSPVVACPSSA 322
S TV P P+P +PQ S A SSA
Sbjct: 463 SVTVRRHLPLPEPNASPQPAQSSHAATSSSA 371
>gb|BF623640.2|BF623640 HVSMEa0003E10f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0003E10f, mRNA sequence
Length = 486
Score = 34.5 bits (69), Expect = 0.70
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = -2 / -2
Query: 385 AEAEEDAPVEALARGGLSVLGGALAHLVEDE 293
AE E D P E G LGGAL LVED+
Sbjct: 230 AEVERDGPAELGGGAGHEDLGGALGDLVEDD 138
>gb|BF630643.2|BF630643 HVSMEb0012I18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0012I18f, mRNA sequence
Length = 718
Score = 34.5 bits (69), Expect = 0.70
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = -3 / +1
Query: 414 STTVSTVSPGPKPKRTPQSRPSPVVACPSSAER 316
+T+ S+++ P P +P+S PSP A PSS R
Sbjct: 430 NTSSSSMASSPSPSLSPRSSPSPPTARPSSRGR 528
>gb|AJ462153.1|AJ462153 AJ462153 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200071A04F1, mRNA sequence
Length = 360
Score = 34.5 bits (69), Expect = 0.70
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2 / +3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG +LD++E + L M +R L +GN SS+ + + L
Sbjct: 69 HAGGRGVLDELENSLKLTPWHMEPSRMTLYRFGNTSSSSLWYEL 200
>gb|BJ453994.1|BJ453994 BJ453994 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45h08 5', mRNA sequence
Length = 457
Score = 34.5 bits (69), Expect = 0.70
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3 / +3
Query: 396 VSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQ 283
VSP P+P T +SRPS SS+ RL+++ ++ +Q
Sbjct: 15 VSPRPRPPPTRRSRPSTTPRPSSSSRRLQMNLLLRNSQ 128
>gb|BU997662.1|BU997662 HI08K07r HI Hordeum vulgare subsp. vulgare cDNA clone HI08K07
5-PRIME, mRNA sequence
Length = 601
Score = 34.5 bits (69), Expect = 0.70
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2 / +1
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG +LD++E + L M +R L +GN SS+ + + L
Sbjct: 346 HAGGRGVLDELENSLKLTPWHMEPSRMTLYRFGNTSSSSLWYEL 477
>gb|CB858895.1|CB858895 HI08K07w HI Hordeum vulgare subsp. vulgare cDNA clone HI08K07
3-PRIME, mRNA sequence
Length = 608
Score = 34.5 bits (69), Expect = 0.70
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2 / -3
Query: 170 HPGGPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFIL 301
H GG +LD++E + L M +R L +GN SS+ + + L
Sbjct: 501 HAGGRGVLDELENSLKLTPWHMEPSRMTLYRFGNTSSSSLWYEL 370
>gb|AJ461561.1|AJ461561 AJ461561 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200025B02F1, mRNA sequence
Length = 300
Score = 23.1 bits (44), Expect(3) = 0.70
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3 / +3
Query: 135 PSGLNASSSARPMFLEMSPGTSLSRW 58
PSG + + + R S G+SL RW
Sbjct: 147 PSGTSTTGTHRRRKRRGSAGSSLRRW 224
Score = 23.1 bits (44), Expect(3) = 0.70
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2 / +2
Query: 340 GLSVLGGALAHLVEDEEDAGAGHV 269
GLS+ G +A+ V++ E GHV
Sbjct: 59 GLSLDGALIANSVDEAEVKVTGHV 130
Score = 20.8 bits (39), Expect(3) = 0.70
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = -3 / +3
Query: 210 LASTWSRMAGPPGCAT 163
L TW GP G +T
Sbjct: 117 LPGTWRTKGGPSGTST 164
>gb|CA018202.1|CA018202 HV07O19r HV Hordeum vulgare subsp. vulgare cDNA clone HV07O19
5-PRIME, mRNA sequence
Length = 381
Score = 31.3 bits (62), Expect(2) = 0.74
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGSPSTCSRTC 77
C RR+PST ++RW +T +C
Sbjct: 109 CTARRSPSTPRTSRWAPGATTXXSC 183
Score = 21.7 bits (41), Expect(2) = 0.74
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +1
Query: 183 PPSSTRWRPRS 215
PP S R RPRS
Sbjct: 232 PPPSXRCRPRS 264
>gb|CA013755.1|CA013755 HT09G07r HT Hordeum vulgare subsp. vulgare cDNA clone HT09G07
5-PRIME, mRNA sequence
Length = 530
Score = 27.2 bits (53), Expect(2) = 0.76
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / +3
Query: 372 RTPQSRPSPVVACPSSAERLRISSRMKRTQA 280
RTP+SRPS A PS R ++ RT++
Sbjct: 198 RTPRSRPSTPTAGPSCTWRRCCATTSTRTRS 290
Score = 26.3 bits (51), Expect(2) = 0.76
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3 / +3
Query: 51 SPTSRRWPSMAPSES 7
SPTS RWPS A S
Sbjct: 384 SPTSSRWPSAAAPSS 428
>gb|BE455107.3|BE455107 HVSMEh0096D11f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0096D11f, mRNA sequence
Length = 771
Score = 25.8 bits (50), Expect(2) = 0.82
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -2
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 212 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSXAP 90
Score = 25.8 bits (50), Expect(2) = 0.82
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP++ PSP C
Sbjct: 356 PRRRRTPRAAPSPRARC 306
>gb|BG367610.2|BG367610 HVSMEi0012O21f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0012O21f, mRNA sequence
Length = 736
Score = 28.6 bits (56), Expect(2) = 0.82
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3 / -1
Query: 381 KPKRTPQSRPSPVVACPSSAERLRI 307
+P+R P P+P AC SA RI
Sbjct: 91 QPRRRPAGSPAPAGACTPSARSRRI 17
Score = 23.1 bits (44), Expect(2) = 0.82
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3 / -1
Query: 426 GTLWSTTVSTVSPGPKPKR 370
GT + T +T SPG P+R
Sbjct: 163 GTWAAPTAATCSPGHAPRR 107
>gb|AL504109.1|AL504109 AL504109 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04D19V 5', mRNA sequence
Length = 700
Score = 28.1 bits (55), Expect(2) = 0.82
Identities = 22/65 (33%), Positives = 23/65 (35%)
Frame = -2 / +2
Query: 196 VEDGGPAGVRHPEDGVPVGDAERLERVVQRAADVLGDEPGHVLEQVEGEPHLAEVAVDGA 17
V GGPAG P+ GD R A DV P HV V A GA
Sbjct: 311 VXGGGPAGGGGPQGRPGGGDQGRGGATQAAAHDVQRHVPHHVRPPVRDRGRPALQPAQGA 490
Query: 16 LRVGQ 2
R Q
Sbjct: 491 QRRAQ 505
Score = 23.5 bits (45), Expect(2) = 0.82
Identities = 15/57 (26%), Positives = 21/57 (36%)
Frame = -3 / +1
Query: 417 WSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSERTW 247
W + + S T S P+P SS R S+ T + P +RTW
Sbjct: 46 WPSGSARXSSSAWASATWWSXPAPSSPRRSSTPRASSSAPAPATSSSTSSPARDRTW 216
>gb|BE558912.1|BE558912 HV_CEb0020M03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020M03f, mRNA sequence
Length = 820
Score = 31.3 bits (62), Expect(2) = 0.86
Identities = 15/56 (26%), Positives = 20/56 (35%)
Frame = -3 / +1
Query: 198 WSRMAGPPGCATQKMEFQSEMPSGLNASSSARPMFLEMSPGTSLSRWKVSPTSRRW 31
WSR A P K S P G + + SP T+ W P++ W
Sbjct: 604 WSRFASTPPDFRAKRALTSRFPGGQLNREATLSLIATGSPRTTPCGWAPPPSTNSW 771
Score = 22.6 bits (43), Expect(2) = 0.86
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3 / +1
Query: 372 RTPQSRPSPVVACPS 328
RTP PSP +C S
Sbjct: 373 RTPTKPPSPTCSCRS 417
>gb|BF258533.2|BF258533 HVSMEf0015P19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0015P19f, mRNA sequence
Length = 601
Score = 29.0 bits (57), Expect(2) = 0.86
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2 / -2
Query: 184 GPAGVRHPEDGVPVGDAERLERVVQRAADVLGD 86
G V HP D VP DA V +V+GD
Sbjct: 363 GDTDVLHPGDAVPESDAFEHPEVASVCVEVVGD 265
Score = 24.4 bits (47), Expect(2) = 0.86
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3 / -3
Query: 414 STTVSTVSPGPKPKRTPQSRPSPVVACPSSA 322
S TV P P+P +PQ S A SSA
Sbjct: 452 SVTVRRHLPLPEPNASPQPAQSSHAATSSSA 360
>gb|BE214259.1|BE214259 HV_CEb0002O12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002O12f, mRNA sequence
Length = 732
Score = 34.1 bits (68), Expect = 0.96
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -3 / +3
Query: 426 GTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSS 325
GT ST+ S SP P P P SRPS A +S
Sbjct: 147 GTAASTSASAASP*PPPSPAPPSRPSSPPAATAS 248
>gb|BG310307.2|BG310307 HVSMEc0017I13f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0017I13f, mRNA sequence
Length = 909
Score = 34.1 bits (68), Expect = 0.96
Identities = 18/57 (31%), Positives = 22/57 (38%)
Frame = -2 / -1
Query: 244 GGAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVPVGDAERLERVVQRAADVLGDEPGH 74
GG P + + LH+ PA RH G VG R V +GD P H
Sbjct: 318 GGPTPAVERVAFALHVRAHARPAARRHGAPGARVGRLHRQPPAVAEERVRVGDAPAH 148
>gb|BF260051.3|BF260051 HVSMEf0020P16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020P16f, mRNA sequence
Length = 807
Score = 34.1 bits (68), Expect = 0.96
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 168 RTPAGPPSSTRWRPRSGWTRP 230
R PA PP++ WRP S W P
Sbjct: 109 RQPASPPATRSWRPPSAWA*P 171
>gb|AV917455.1|AV917455 AV917455 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18p17 5', mRNA sequence
Length = 647
Score = 34.1 bits (68), Expect = 0.96
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3 / +1
Query: 402 STVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKR 289
STV P P+P TP S PSP+ S + R +R
Sbjct: 79 STVEPPPRP*ATPSSSPSPLTRAAPSNGQASARGRRRR 192
>gb|BI779476.2|BI779476 EBro01_SQ004_C17_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ004_C17 5', mRNA sequence
Length = 594
Score = 34.1 bits (68), Expect = 0.96
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3 / +3
Query: 402 STVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKR 289
STV P P+P TP S PSP+ S + R +R
Sbjct: 69 STVEPPPRP*ATPSSSPSPLTRAAPSNGQASARGRRRR 182
>gb|BQ762907.1|BQ762907 EBro02_SQ006_B15_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ006_B15 5', mRNA sequence
Length = 566
Score = 34.1 bits (68), Expect = 0.96
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3 / -2
Query: 174 PAGPPSSTRWRPRSGWTRPGC 236
PA P S+RWRPRSG R C
Sbjct: 355 PAPPCPSSRWRPRSGSVRTPC 293
>gb|BU975843.1|BU975843 HB32H15r BC Hordeum vulgare subsp. vulgare cDNA clone HB32H15
5-PRIME, mRNA sequence
Length = 447
Score = 34.1 bits (68), Expect = 0.96
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -3 / +2
Query: 471 GSLMMNQAVAAPVVMGTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMK 292
G+ + ++++ V T W T P RTP + P+P V P R+ SR +
Sbjct: 2 GTRVQTTSMSSGAVATTSWPPPTPTPFATTPPPRTPSACPTPTVTAP**GPLHRLRSRPR 181
Query: 291 RTQALDML 268
R + +L
Sbjct: 182 RHRPYGVL 205
>gb|CA018753.1|CA018753 HV09I23r HV Hordeum vulgare subsp. vulgare cDNA clone HV09I23
5-PRIME, mRNA sequence
Length = 466
Score = 34.1 bits (68), Expect = 0.96
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3 / +3
Query: 438 PVVMGTLWSTTVSTVSPGPKPKRTPQSRPS 349
P + T W VST +P PKP RT + S
Sbjct: 90 PRALATTWQVGVSTANPTPKPSRTTPASAS 179
>emb|Z23131.1|HVPRX6GNA H.vulgare prx6 gene, complete CDS
Length = 2666
Score = 34.1 bits (68), Expect = 0.96
Identities = 24/75 (32%), Positives = 28/75 (37%)
Frame = -2 / -3
Query: 295 EEDAGAGHVAVLGEDVAGGAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVPVGDAERLERV 116
E D G A L E V G H G + G H V G P V E V A + V
Sbjct: 1488 ERDEVGGFEAELAEHVEEGCHVGGRPREAGAHCVPCGEPCAVAAAEGHAVVRAARGDDGV 1309
Query: 115 VQRAADVLGDEPGHV 71
+ DV + G V
Sbjct: 1308 ARERQDVGAGDDGAV 1264
>gb|BI780280.2|BI780280 EBem06_SQ001_B05_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ001_B05 5', mRNA sequence
Length = 390
Score = 30.9 bits (61), Expect(2) = 1.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3 / +3
Query: 432 VMGTLWSTTVSTVSPGPKPKRTPQSRPSPV 343
+M T+ S T + P P P P RPSP+
Sbjct: 87 MMATVGSDTAPPLRPHPSPPAPPLQRPSPL 176
Score = 21.7 bits (41), Expect(2) = 1.0
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -3 / +3
Query: 255 RTWRVARILALSSPTLASTW 196
R WR+ + + LA+TW
Sbjct: 330 RRWRIPPPMTATPTRLATTW 389
>gb|BE193923.3|BE193923 HVSMEh0082O11f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0082O11f, mRNA sequence
Length = 777
Score = 25.8 bits (50), Expect(2) = 1.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3 / -1
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP++ PSP C
Sbjct: 348 PRRRRTPRAAPSPRARC 298
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -1
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 204 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSLAP 82
>emb|AJ291295.1|HVU291295 Hordeum vulgare mRNA for cold-regulated protein, clone cor tma-ap3
Length = 672
Score = 25.8 bits (50), Expect(2) = 1.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP++ PSP C
Sbjct: 281 PRRRRTPRAAPSPRARC 231
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -2
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 137 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSPAP 15
>gb|BG299564.2|BG299564 HVSMEa0020M14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0020M14f, mRNA sequence
Length = 666
Score = 25.8 bits (50), Expect(2) = 1.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3 / -3
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP++ PSP C
Sbjct: 337 PRRRRTPRAAPSPRARC 287
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -3
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 193 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSPAP 71
>gb|BQ466758.1|BQ466758 HS01H23T HS Hordeum vulgare subsp. vulgare cDNA clone HS01H23
5-PRIME, mRNA sequence
Length = 640
Score = 25.8 bits (50), Expect(2) = 1.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP++ PSP C
Sbjct: 354 PRRRRTPRAAPSPRARC 304
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -2
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 210 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSPAP 88
>gb|CB878454.1|CB878454 HP08J15T HP Hordeum vulgare subsp. vulgare cDNA clone HP08J15
5-PRIME, mRNA sequence
Length = 616
Score = 25.8 bits (50), Expect(2) = 1.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP++ PSP C
Sbjct: 372 PRRRRTPRAAPSPRARC 322
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -2
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 228 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSPAP 106
>gb|BQ463589.1|BQ463589 HI05M23r HI Hordeum vulgare subsp. vulgare cDNA clone HI05M23
5-PRIME, mRNA sequence
Length = 581
Score = 25.8 bits (50), Expect(2) = 1.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3 / -3
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP++ PSP C
Sbjct: 345 PRRRRTPRAAPSPRARC 295
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -3
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 201 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSPAP 79
>gb|CB878365.1|CB878365 HP08E15T HP Hordeum vulgare subsp. vulgare cDNA clone HP08E15
5-PRIME, mRNA sequence
Length = 580
Score = 25.8 bits (50), Expect(2) = 1.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP++ PSP C
Sbjct: 360 PRRRRTPRAAPSPRARC 310
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -2
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 216 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSPAP 94
>gb|CB878457.1|CB878457 HP08J18T HP Hordeum vulgare subsp. vulgare cDNA clone HP08J18
5-PRIME, mRNA sequence
Length = 580
Score = 25.8 bits (50), Expect(2) = 1.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP++ PSP C
Sbjct: 366 PRRRRTPRAAPSPRARC 316
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -2
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 222 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSPAP 100
>gb|BQ469235.1|BQ469235 HM03M19r HM Hordeum vulgare subsp. vulgare cDNA clone HM03M19
5-PRIME, mRNA sequence
Length = 571
Score = 25.8 bits (50), Expect(2) = 1.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3 / -3
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP++ PSP C
Sbjct: 359 PRRRRTPRAAPSPRARC 309
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -3
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 215 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSPAP 93
>gb|CA018536.1|CA018536 HV08O15r HV Hordeum vulgare subsp. vulgare cDNA clone HV08O15
5-PRIME, mRNA sequence
Length = 510
Score = 25.8 bits (50), Expect(2) = 1.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3 / -3
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP++ PSP C
Sbjct: 373 PRRRRTPRAAPSPRARC 323
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -3
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 229 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSPAP 107
>gb|BI780363.2|BI780363 EBem06_SQ001_J02_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ001_J02 5', mRNA sequence
Length = 460
Score = 25.8 bits (50), Expect(2) = 1.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3 / -3
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP++ PSP C
Sbjct: 323 PRRRRTPRAAPSPRARC 273
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -3
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 179 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSPAP 57
>gb|CA002228.1|CA002228 HS06O05r HS Hordeum vulgare subsp. vulgare cDNA clone HS06O05
5-PRIME, mRNA sequence
Length = 459
Score = 25.8 bits (50), Expect(2) = 1.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3 / -1
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP++ PSP C
Sbjct: 369 PRRRRTPRAAPSPRARC 319
Score = 25.4 bits (49), Expect(2) = 1.1
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -1
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 225 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSPAP 103
>gb|BE559155.2|BE559155 HV_CEb0023L06f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023L06f, mRNA sequence
Length = 820
Score = 29.0 bits (57), Expect(2) = 1.2
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2 / -3
Query: 184 GPAGVRHPEDGVPVGDAERLERVVQRAADVLGD 86
G V HP D VP DA V +V+GD
Sbjct: 374 GDTDVLHPGDAVPESDAFEHPEVASVCVEVVGD 276
Score = 24.4 bits (47), Expect(2) = 1.2
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3 / -1
Query: 414 STTVSTVSPGPKPKRTPQSRPSPVVACPSSA 322
S TV P P+P +PQ S A SSA
Sbjct: 463 SVTVRRHLPLPEPNASPQPAQSSHAATSSSA 371
>gb|BM369923.2|BM369923 EBem07_SQ004_P22_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ004_P22 5', mRNA sequence
Length = 372
Score = 25.8 bits (50), Expect(2) = 1.2
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3 / -1
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP++ PSP C
Sbjct: 351 PRRRRTPRAAPSPRARC 301
Score = 25.4 bits (49), Expect(2) = 1.2
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -1
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 207 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSPAP 85
>gb|BI949145.1|BI949145 HVSMEl0012I19f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0012I19f, mRNA sequence
Length = 823
Score = 29.0 bits (57), Expect(2) = 1.2
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2 / -3
Query: 184 GPAGVRHPEDGVPVGDAERLERVVQRAADVLGD 86
G V HP D VP DA V +V+GD
Sbjct: 383 GDTDVLHPGDAVPESDAFEHPEVASVCVEVVGD 285
Score = 24.4 bits (47), Expect(2) = 1.2
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3 / -1
Query: 414 STTVSTVSPGPKPKRTPQSRPSPVVACPSSA 322
S TV P P+P +PQ S A SSA
Sbjct: 472 SVTVRRHLPLPEPNASPQPAQSSHAATSSSA 380
>gb|BE558385.2|BE558385 HV_CEb0017H10f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0017H10f, mRNA sequence
Length = 829
Score = 29.0 bits (57), Expect(2) = 1.2
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2 / -3
Query: 184 GPAGVRHPEDGVPVGDAERLERVVQRAADVLGD 86
G V HP D VP DA V +V+GD
Sbjct: 365 GDTDVLHPGDAVPESDAFEHPEVASVCVEVVGD 267
Score = 24.4 bits (47), Expect(2) = 1.2
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3 / -1
Query: 414 STTVSTVSPGPKPKRTPQSRPSPVVACPSSA 322
S TV P P+P +PQ S A SSA
Sbjct: 454 SVTVRRHLPLPEPNASPQPAQSSHAATSSSA 362
>gb|CA024260.1|CA024260 HZ48N01r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48N01
5-PRIME, mRNA sequence
Length = 451
Score = 30.9 bits (61), Expect(2) = 1.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3 / +3
Query: 432 VMGTLWSTTVSTVSPGPKPKRTPQSRPSPV 343
+M T+ S T + P P P P RPSP+
Sbjct: 81 MMATVGSDTAPPLRPHPSPPAPPLQRPSPL 170
Score = 21.7 bits (41), Expect(2) = 1.2
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -3 / +3
Query: 255 RTWRVARILALSSPTLASTW 196
R WR+ + + LA+TW
Sbjct: 324 RRWRIPPPMTATPTRLATTW 383
>gb|BF266823.2|BF266823 HV_CEa0016C15f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0016C15f, mRNA sequence
Length = 841
Score = 29.0 bits (57), Expect(2) = 1.2
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2 / -2
Query: 184 GPAGVRHPEDGVPVGDAERLERVVQRAADVLGD 86
G V HP D VP DA V +V+GD
Sbjct: 384 GDTDVLHPGDAVPESDAFEHPEVASVCVEVVGD 286
Score = 24.4 bits (47), Expect(2) = 1.2
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3 / -3
Query: 414 STTVSTVSPGPKPKRTPQSRPSPVVACPSSA 322
S TV P P+P +PQ S A SSA
Sbjct: 473 SVTVRRHLPLPEPNASPQPAQSSHAATSSSA 381
>gb|BF261805.2|BF261805 HV_CEa0002E10f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0002E10f, mRNA sequence
Length = 856
Score = 29.0 bits (57), Expect(2) = 1.2
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2 / -2
Query: 184 GPAGVRHPEDGVPVGDAERLERVVQRAADVLGD 86
G V HP D VP DA V +V+GD
Sbjct: 378 GDTDVLHPGDAVPESDAFEHPEVASVCVEVVGD 280
Score = 24.4 bits (47), Expect(2) = 1.2
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3 / -3
Query: 414 STTVSTVSPGPKPKRTPQSRPSPVVACPSSAER 316
S TV P P+P +PQ S A SS R
Sbjct: 467 SVTVRRHLPLPEPNASPQPAQSSHAATSSSVTR 369
>gb|BI958786.1|BI958786 HVSMEn0016J16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016J16f, mRNA sequence
Length = 638
Score = 27.6 bits (54), Expect(2) = 1.2
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3 / +1
Query: 192 STRWRPRSGWTRPGC 236
S RWRPR W GC
Sbjct: 505 SWRWRPRRWWIARGC 549
Score = 25.4 bits (49), Expect(2) = 1.2
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGSPSTC 65
CP R T T RW +TC
Sbjct: 37 CPQPRIAVTLTFTRWRKTTTC 99
>gb|BE216369.2|BE216369 HV_CEb0010F01f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010F01f, mRNA sequence
Length = 930
Score = 29.0 bits (57), Expect(2) = 1.3
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2 / -1
Query: 184 GPAGVRHPEDGVPVGDAERLERVVQRAADVLGD 86
G V HP D VP DA V +V+GD
Sbjct: 393 GDTDVLHPGDAVPESDAFEHPEVASVCVEVVGD 295
Score = 24.4 bits (47), Expect(2) = 1.3
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3 / -2
Query: 414 STTVSTVSPGPKPKRTPQSRPSPVVACPSSA 322
S TV P P+P +PQ S A SSA
Sbjct: 482 SVTVRRHLPLPEPNASPQPAQSSHAATSSSA 390
>gb|BQ763523.1|BQ763523 EBro02_SQ008_N15_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_N15 5', mRNA sequence
Length = 685
Score = 31.3 bits (62), Expect(2) = 1.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2 / -3
Query: 325 GGALAHLVEDEEDAGAGHVAVLGEDVAGGAHPG 227
GG + E++ D GAGH A L + HPG
Sbjct: 395 GGVVGDEGEEQHDGGAGHPAELPDGPGQRQHPG 297
Score = 21.7 bits (41), Expect(2) = 1.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -1 / -2
Query: 452 RRWPLRW*WGRC 417
RRW +RW RC
Sbjct: 561 RRWCIRWRRRRC 526
>gb|AL507655.1|AL507655 AL507655 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06H17V 5',
mRNA sequence
Length = 700
Score = 33.6 bits (67), Expect = 1.3
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3 / +2
Query: 213 TLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSS 109
T STW GPPGCA S P ++S S
Sbjct: 347 TSCSTWCTRPGPPGCAPSPSSSSSTSPPSPSSSPS 451
>gb|BE454379.1|BE454379 HVSMEh0093O14f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0093O14f, mRNA sequence
Length = 903
Score = 33.6 bits (67), Expect = 1.3
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3 / +3
Query: 402 STVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDML 268
ST +P P+P P RPSP + P + + SSR R+ +L
Sbjct: 99 STRAPMPRPGPAPSPRPSPTASPPRTGKGRFRSSRCSRSNLSTIL 233
>gb|BI959291.1|BI959291 HVSMEn0019C01f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019C01f, mRNA sequence
Length = 677
Score = 33.6 bits (67), Expect = 1.3
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = -2 / -2
Query: 304 VEDEEDAGAGHVAVLGEDVAGGAHPGLVQPDLGLHLVEDGGPAGVRHPEDG 152
V DE+D GAG AV+GE V GG G +G VE GV G
Sbjct: 283 VVDEDDVGAGGGAVVGERVDGGDLDGGDDGGVGGERVEADVRGGVGRGRGG 131
>gb|BQ460072.1|BQ460072 HA07E16r HA Hordeum vulgare subsp. vulgare cDNA clone HA07E16
5-PRIME, mRNA sequence
Length = 618
Score = 33.6 bits (67), Expect = 1.3
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3 / +1
Query: 213 TLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSS 109
T STW GPPGCA S P ++S S
Sbjct: 151 TSCSTWCTRPGPPGCAPSPSSSSSTSPPSPSSSPS 255
>gb|BQ468818.1|BQ468818 HM02G24r HM Hordeum vulgare subsp. vulgare cDNA clone HM02G24
5-PRIME, mRNA sequence
Length = 475
Score = 33.6 bits (67), Expect = 1.3
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / +3
Query: 238 RHPPRPLRVRQHVQRLRPLHPRR 306
RHPP+ R+R H+ R RP PRR
Sbjct: 237 RHPPQRRRLRWHLPRPRPPTPRR 305
>gb|BM443133.2|BM443133 EBro02_SQ002_L10_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_L10 5', mRNA sequence
Length = 415
Score = 33.6 bits (67), Expect = 1.3
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / +1
Query: 238 RHPPRPLRVRQHVQRLRPLHPRR 306
RHPP+ R+R H+ R RP PRR
Sbjct: 232 RHPPQRRRLRWHLPRPRPPTPRR 300
>gb|CA004669.1|CA004669 HS18F07r HS Hordeum vulgare subsp. vulgare cDNA clone HS18F07
5-PRIME, mRNA sequence
Length = 418
Score = 33.6 bits (67), Expect = 1.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3 / +3
Query: 438 PVVMGTLWSTTVSTVSPGPKPKRTPQSRPS 349
P + T W VST +P PKP RT + S
Sbjct: 99 PRALATTWQLGVSTANPTPKPSRTTPASAS 188
>gb|CA018451.1|CA018451 HV08K14r HV Hordeum vulgare subsp. vulgare cDNA clone HV08K14
5-PRIME, mRNA sequence
Length = 630
Score = 33.6 bits (67), Expect = 1.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3 / +2
Query: 438 PVVMGTLWSTTVSTVSPGPKPKRTPQSRPS 349
P + T W VST +P PKP RT + S
Sbjct: 80 PRALATTWQLGVSTANPTPKPSRTTPASAS 169
>gb|CB858613.1|CB858613 HI07L05w HI Hordeum vulgare subsp. vulgare cDNA clone HI07L05
3-PRIME, mRNA sequence
Length = 483
Score = 33.6 bits (67), Expect = 1.3
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1 / -1
Query: 238 RHPPRPLRVRQHVQRLRPLHPRR 306
RHPP+ R+R H+ R RP PRR
Sbjct: 381 RHPPQRRRLRWHLPRPRPPTPRR 313
>gb|CA032180.1|CA032180 HX12E07r HX Hordeum vulgare subsp. vulgare cDNA clone HX12E07
5-PRIME, mRNA sequence
Length = 515
Score = 29.9 bits (59), Expect(2) = 1.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3 / -3
Query: 414 STTVSTVSPGPKPKRTPQSRPSPVVA 337
S++VS+ SP P P TP P+P A
Sbjct: 228 SSSVSSSSPSPVPAPTPTPAPAPAPA 151
Score = 22.6 bits (43), Expect(2) = 1.3
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3 / -1
Query: 198 WSRMAGPPGCATQ 160
W+R AG GCA++
Sbjct: 65 WARRAGAYGCASR 27
>gb|BI957135.1|BI957135 HVSMEn0007K22f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007K22f, mRNA sequence
Length = 1190
Score = 25.8 bits (50), Expect(2) = 1.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3 / -2
Query: 372 RTPQSRPSPVVACPSSAERL 313
R S PSPVV+C +SA L
Sbjct: 97 RPSPSAPSPVVSCSASAAGL 38
Score = 24.9 bits (48), Expect(2) = 1.4
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -3 / -2
Query: 417 WSTTVSTVSPGPKPKRTPQSRPSP 346
W + + SP P TP S P P
Sbjct: 217 WRSRXGSTSPAPGAPCTPASPPGP 146
>gb|BG343835.2|BG343835 HVSMEg0006O03f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006O03f, mRNA sequence
Length = 957
Score = 27.2 bits (53), Expect(2) = 1.5
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -2 / +2
Query: 187 GGPAGVRHPEDGVPVGDAERLERVVQRAA 101
GG AGVR PVGD R+VQR A
Sbjct: 410 GGVAGVRRGLXRRPVGDHPPGLRLVQRGA 496
Score = 23.5 bits (45), Expect(2) = 1.5
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = -3 / +1
Query: 60 WKVSPTSRRWPSMAPSES 7
W+ S + + WP AP +
Sbjct: 592 WRASASPKAWPRAAPGRA 645
>gb|BG414400.2|BG414400 HVSMEk0002B08f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002B08f, mRNA sequence
Length = 842
Score = 25.8 bits (50), Expect(2) = 1.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3 / -2
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP++ PSP C
Sbjct: 337 PRRRRTPRAAPSPRARC 287
Score = 24.9 bits (48), Expect(2) = 1.5
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -2
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 193 TTPAAARCPSWRHAPPACTAAAAARRAPTPAGTPASGSLAP 71
>gb|AV926426.1|AV926426 AV926426 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19f11 5', mRNA sequence
Length = 428
Score = 30.4 bits (60), Expect(2) = 1.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGSPSTCSRTC 77
C RR+PST ++RW +T +C
Sbjct: 49 CTARRSPSTPRTSRWAPGATTPPSC 123
Score = 21.7 bits (41), Expect(2) = 1.5
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +1
Query: 183 PPSSTRWRPRS 215
PP S R RPRS
Sbjct: 172 PPPSARCRPRS 204
>gb|BF064845.3|BF064845 HV_CEb0019O17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0019O17f, mRNA sequence
Length = 587
Score = 26.7 bits (52), Expect(2) = 1.5
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -2 / -2
Query: 352 LARGGLSVLGGALAHLVEDEEDAGAGHVAVLGEDVAGGAH 233
L G GG + +V E AG G A G VAGG H
Sbjct: 361 LPGGRALAAGGLVLVVVAAGEAAGGGVAADGGVGVAGGRH 242
Score = 24.0 bits (46), Expect(2) = 1.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2 / -2
Query: 421 AVEHDGLDGESRAEAEEDAPVEALARG 341
A EH+G +GE EA ++ A G
Sbjct: 511 APEHEGEEGEENGEAADEDEAVLAALG 431
>gb|AL505149.1|AL505149 AL505149 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I21V 5', mRNA sequence
Length = 568
Score = 27.2 bits (53), Expect(2) = 1.5
Identities = 21/62 (33%), Positives = 22/62 (35%)
Frame = -2 / +1
Query: 196 VEDGGPAGVRHPEDGVPVGDAERLERVVQRAADVLGDEPGHVLEQVEGEPHLAEVAVDGA 17
V GGPAG P+ GD R A DV P HV V A GA
Sbjct: 361 VXGGGPAGGGGPQGRPGGGDQGRGGATQAAAHDVQRHVPHHVRPPVRDRGRPALQPAQGA 540
Query: 16 LR 11
R
Sbjct: 541 QR 546
Score = 23.5 bits (45), Expect(2) = 1.5
Identities = 15/57 (26%), Positives = 21/57 (36%)
Frame = -3 / +3
Query: 417 WSTTVSTVSPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSERTW 247
W + + S T S P+P SS R S+ T + P +RTW
Sbjct: 96 WPSGSARCSSSAWASATWWSSPAPSSPRRSSTPRASSSAPAPATSSSTSSPARDRTW 266
>gb|BE411476.1|BE411476 ISC006.A05F990623 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC006.A05, mRNA sequence
Length = 515
Score = 25.4 bits (49), Expect(2) = 1.5
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -1
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 206 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSPAP 84
Score = 25.4 bits (49), Expect(2) = 1.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3 / -1
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP+ PSP C
Sbjct: 350 PRRRRTPRQAPSPRARC 300
>gb|BE411834.1|BE411834 ISC009.G05F990816 ITEC ISC Barley Leaf Library Hordeum vulgare
subsp. vulgare cDNA clone ISC009.G05, mRNA sequence
Length = 507
Score = 25.4 bits (49), Expect(2) = 1.5
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = -3 / -2
Query: 222 SSPTLASTWSRMAGPPGCATQKMEFQSEMPSGLNASSSARP 100
++P A S PP C ++ P+G AS S P
Sbjct: 206 TTPAAARCPSWRPAPPACTAAAAARRAPTPAGTPASGSPAP 84
Score = 25.4 bits (49), Expect(2) = 1.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3 / -3
Query: 384 PKPKRTPQSRPSPVVAC 334
P+ +RTP+ PSP C
Sbjct: 349 PRRRRTPRQAPSPRARC 299
>gb|BQ463208.1|BQ463208 HI04M06r HI Hordeum vulgare subsp. vulgare cDNA clone HI04M06
5-PRIME, mRNA sequence
Length = 386
Score = 27.6 bits (54), Expect(2) = 1.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / +3
Query: 9 TRRAPSTATSARWGSP 56
T RAP T+T+ RW SP
Sbjct: 198 TPRAPWTSTTRRWASP 245
Score = 23.1 bits (44), Expect(2) = 1.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3 / +3
Query: 171 TPAGPPSSTRWRPRSGWT 224
TP PP++ PR+ W+
Sbjct: 321 TPGAPPTAPPAAPRAPWS 374
>gb|BI960540.1|BI960540 HVSMEn0024P11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024P11f, mRNA sequence
Length = 668
Score = 24.0 bits (46), Expect(3) = 1.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3 / +3
Query: 15 RAPSTATSARWGSPSTCSRTCP 80
RAP++ T++ G+ T TCP
Sbjct: 228 RAPASTTNSPSGTALTGGSTCP 293
Score = 23.5 bits (45), Expect(3) = 1.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1 / +1
Query: 250 RPLRVRQHVQRLRPLHP 300
RP RQH Q LR HP
Sbjct: 529 RPAP*RQHPQLLRQQHP 579
Score = 21.7 bits (41), Expect(3) = 1.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2 / +3
Query: 314 KRSAEDGQATTGEGLDW 364
K S+ + +TTG DW
Sbjct: 609 KSSSSEAPSTTGSPTDW 659
>gb|BI954459.1|BI954459 HVSMEm0018A18f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0018A18f, mRNA sequence
Length = 672
Score = 24.0 bits (46), Expect(3) = 1.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3 / +1
Query: 15 RAPSTATSARWGSPSTCSRTCP 80
RAP++ T++ G+ T TCP
Sbjct: 232 RAPASTTNSPSGTALTGGSTCP 297
Score = 23.5 bits (45), Expect(3) = 1.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1 / +2
Query: 250 RPLRVRQHVQRLRPLHP 300
RP RQH Q LR HP
Sbjct: 533 RPAP*RQHPQLLRQQHP 583
Score = 21.7 bits (41), Expect(3) = 1.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2 / +1
Query: 314 KRSAEDGQATTGEGLDW 364
K S+ + +TTG DW
Sbjct: 613 KSSSSEAPSTTGSPTDW 663
>gb|BI958092.1|BI958092 HVSMEn0013F05f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0013F05f, mRNA sequence
Length = 852
Score = 31.3 bits (62), Expect(2) = 1.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3 / -1
Query: 390 PGPKPKRTPQSRPSPVVACP 331
P P P+R P RP P CP
Sbjct: 453 PSPPPRRPPPPRPRPSAPCP 394
Score = 21.7 bits (41), Expect(2) = 1.6
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -3 / -3
Query: 117 SSSARPMFLEMSPGTSLSRWKVSPTSRRWPSMAPSES 7
S ARP+ + SP S + T RW +P S
Sbjct: 337 SRLARPIRIAPSPPMRTSAALTALTRLRWSHRSPLRS 227
>gb|AJ434528.1|AJ434528 AJ434528 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200042C05F1, mRNA sequence
Length = 480
Score = 30.4 bits (60), Expect(2) = 1.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3 / +2
Query: 3 CPTRRAPSTATSARWGSPSTCSRTC 77
C RR+PST ++RW +T +C
Sbjct: 110 CTARRSPSTPRTSRWAPGATTPPSC 184
Score = 21.7 bits (41), Expect(2) = 1.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +2
Query: 183 PPSSTRWRPRS 215
PP S R RPRS
Sbjct: 233 PPPSARCRPRS 265
>gb|BQ766535.1|BQ766535 EBro08_SQ006_J09_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ006_J09 5', mRNA sequence
Length = 666
Score = 28.1 bits (55), Expect(2) = 1.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2 / +3
Query: 721 PNTSPPHAC*SDNDKGLLLKLALPWSC 641
P+ PP +NDKG ++ L +P C
Sbjct: 15 PSDQPPQLAKMENDKGEIVDLYVPRKC 95
Score = 24.4 bits (47), Expect(2) = 1.7
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -3 / +1
Query: 468 SLMMNQAVAAPVVMGTLWSTTVSTVSPGPKPKRTPQSRPSPVVACPSSA 322
S ++ AAP + TT + SP P+ RT + + PS+A
Sbjct: 70 STFTSRGSAAPPTASSRPRTTRLSRSPSPRSMRTAVRSRARTTSTPSAA 216
>gb|BM098782.2|BM098782 EBpi05_SQ002_A18_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ002_A18 5', mRNA sequence
Length = 501
Score = 30.4 bits (60), Expect(2) = 1.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3 / +3
Query: 3 CPTRRAPSTATSARWGSPSTCSRTC 77
C RR+PST ++RW +T +C
Sbjct: 99 CTARRSPSTPRTSRWAPGATTPPSC 173
Score = 21.7 bits (41), Expect(2) = 1.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +3
Query: 183 PPSSTRWRPRS 215
PP S R RPRS
Sbjct: 222 PPPSARCRPRS 254
>gb|BM101189.2|BM101189 EBpi01_SQ003_C11_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ003_C11 5', mRNA sequence
Length = 504
Score = 30.4 bits (60), Expect(2) = 1.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3 / +2
Query: 3 CPTRRAPSTATSARWGSPSTCSRTC 77
C RR+PST ++RW +T +C
Sbjct: 47 CTARRSPSTPRTSRWAPGATTPPSC 121
Score = 21.7 bits (41), Expect(2) = 1.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +2
Query: 183 PPSSTRWRPRS 215
PP S R RPRS
Sbjct: 170 PPPSARCRPRS 202
>gb|AL509011.1|AL509011 AL509011 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10H08V 5',
mRNA sequence
Length = 655
Score = 33.1 bits (66), Expect = 1.8
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = -2 / -2
Query: 295 EEDAGAGHVAVLGEDVAGGAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVPVGDA 134
E D G A L E V G H G + G H V G P V E VG A
Sbjct: 624 ERDEVGGFEAELAEHVEEGCHVGGRPREAGAHCVPCGEPCAVAAAEGHAVVGPA 463
>gb|AV832695.1|AV832695 AV832695 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare top three leaves adult, heading stage Hordeum
vulgare subsp. vulgare cDNA clone baal2g09, mRNA
sequence
Length = 608
Score = 33.1 bits (66), Expect = 1.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3 / +1
Query: 78 GTSLSRWKVSPTSRRWPSMAPSESGR 1
G + RWK SP+S RW S P GR
Sbjct: 175 GRARRRWKSSPSSARWGSARPRLPGR 252
>gb|BF627831.2|BF627831 HVSMEb0005O17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005O17f, mRNA sequence
Length = 837
Score = 33.1 bits (66), Expect = 1.8
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -3 / +2
Query: 393 SPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDMLPYSER 253
SP PKP RTP P+P ++ +A R R R L ER
Sbjct: 2 SPNPKPSRTPPPIPTPFLSIAQAATGRRRRRRSPRVSDSANLGAGER 142
>gb|BF253544.2|BF253544 HVSMEf0001D16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001D16f, mRNA sequence
Length = 569
Score = 33.1 bits (66), Expect = 1.8
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -3 / -1
Query: 120 ASSSARPMFLEMSPGTSLSRWKVSPTSRRWPSMAPSESG 4
AS A P L G RW P S WP M P +G
Sbjct: 323 ASGMASPDLLSTFSGPRKCRWHRDPWSAGWPRMRPPTAG 207
>gb|BI949401.1|BI949401 HVSMEl0013L12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0013L12f, mRNA sequence
Length = 817
Score = 33.1 bits (66), Expect = 1.8
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -2 / -3
Query: 229 GLVQPDLGLHLVEDGGPAGVRHPEDGVPVGDAERLERVVQRAADVLGDEPG 77
G+V DL L ++ PA P++ VGD L VV+R ++ EPG
Sbjct: 512 GVVPSDLLGELAQEAAPAPGLQPQNSERVGDDHALGPVVRRRHTLVRLEPG 360
>gb|BI952084.1|BI952084 HVSMEm0004J01f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0004J01f, mRNA sequence
Length = 841
Score = 33.1 bits (66), Expect = 1.8
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3 / -1
Query: 390 PGPKPKRTPQSRPSPVVACPSSA 322
P P P R PQ RP PV PS A
Sbjct: 583 PPPPPPRAPQPRPPPVHTAPSPA 515
>gb|BI957611.1|BI957611 HVSMEn0010F21f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010F21f, mRNA sequence
Length = 643
Score = 33.1 bits (66), Expect = 1.8
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -3 / -2
Query: 120 ASSSARPMFLEMSPGTSLSRWKVSPTSRRWPSMAPSESG 4
AS A P L G RW P S WP M P +G
Sbjct: 642 ASGMASPDLLSTFSGPRKCRWHRDPWSAGWPCMRPPTAG 526
>gb|BF263945.2|BF263945 HV_CEa0008B23f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0008B23f, mRNA sequence
Length = 440
Score = 33.1 bits (66), Expect = 1.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3 / -1
Query: 414 STTVSTVSPGPKPKRTPQSRPSPVVACPSSAER 316
+T+ +PGP+ RTPQ P P +A P+ R
Sbjct: 230 ATSPPAPAPGPRSPRTPQQMPPPRLAPPARRPR 132
>gb|BE214291.2|BE214291 HV_CEb0003A09f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003A09f, mRNA sequence
Length = 757
Score = 33.1 bits (66), Expect = 1.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3 / +2
Query: 12 RRAPSTATSARWGSPSTCSRTCP 80
RR P T +++ W SP+ +R CP
Sbjct: 170 RRGPRTCSTSSWSSPAATARCCP 238
>gb|BE215906.2|BE215906 HV_CEb0008M23f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0008M23f, mRNA sequence
Length = 492
Score = 33.1 bits (66), Expect = 1.8
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -3 / +1
Query: 378 PKRTPQSRPSPVVACPSSAERLRISSRMKRT 286
P S PSP CP S+ R SSR KRT
Sbjct: 244 PTSASASTPSPARTCPPSSARSSRSSRSKRT 336
>gb|BI958629.1|BI958629 HVSMEn0016A02f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016A02f, mRNA sequence
Length = 672
Score = 33.1 bits (66), Expect = 1.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3 / +2
Query: 12 RRAPSTATSARWGSPSTCSRTCP 80
RR P T +++ W SP+ +R CP
Sbjct: 254 RRGPRTCSTSSWSSPAATARCCP 322
>gb|BJ473038.1|BJ473038 BJ473038 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40j04 5', mRNA sequence
Length = 681
Score = 33.1 bits (66), Expect = 1.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3 / +3
Query: 78 GTSLSRWKVSPTSRRWPSMAPSESGR 1
G + RWK SP+S RW S P GR
Sbjct: 186 GRARRRWKSSPSSARWGSARPRLPGR 263
>gb|BQ467215.1|BQ467215 HS03A16r HS Hordeum vulgare subsp. vulgare cDNA clone HS03A16
5-PRIME, mRNA sequence
Length = 316
Score = 33.1 bits (66), Expect = 1.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3 / +3
Query: 399 TVSPGPKPKRTPQSRPSPVVACPS 328
T++PGP P +P++RP+P + PS
Sbjct: 198 TLAPGPPPSSSPRARPAPPNSPPS 269
>gb|BM443268.2|BM443268 EBro02_SQ003_F15_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ003_F15 5', mRNA sequence
Length = 349
Score = 33.1 bits (66), Expect = 1.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3 / +3
Query: 393 SPGPKPKRTPQSRPSPVVACPSSAERLRISSRMKRTQALDM 271
SP P+P T +SRPS SS+ RL ++ ++ +Q + +
Sbjct: 210 SPRPRPPPTRRSRPSTTPRPSSSSRRLHMNLLLRNSQMIKL 332
>gb|BU983515.1|BU983515 HA29P18r HA Hordeum vulgare subsp. vulgare cDNA clone HA29P18
5-PRIME, mRNA sequence
Length = 564
Score = 33.1 bits (66), Expect = 1.8
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = -2 / -3
Query: 295 EEDAGAGHVAVLGEDVAGGAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVPVGDA 134
E D G A L E V G H G + G H V G P V E VG A
Sbjct: 523 ERDEVGGFEAELAEHVEEGCHVGGRPREAGAHCVPCGEPCAVAAAEGHAVVGPA 362
>gb|BU996227.1|BU996227 HM12O18r HM Hordeum vulgare subsp. vulgare cDNA clone HM12O18
5-PRIME, mRNA sequence
Length = 452
Score = 33.1 bits (66), Expect = 1.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3 / +3
Query: 12 RRAPSTATSARWGSPSTCSRTCP 80
RR P T +++ W SP+ +R CP
Sbjct: 45 RRGPRTCSTSSWSSPAATARCCP 113
>gb|CB879462.1|CB879462 HP02F16w HP Hordeum vulgare subsp. vulgare cDNA clone HP02F16
3-PRIME, mRNA sequence
Length = 554
Score = 33.1 bits (66), Expect = 1.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3 / -1
Query: 78 GTSLSRWKVSPTSRRWPSMAPSESGR 1
G + RWK SP+S RW S P GR
Sbjct: 464 GRARRRWKSSPSSARWGSARPRLPGR 387
>gb|CK122110.1|CK122110 BES1824101h12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010H121 5-PRIME, mRNA sequence
Length = 778
Score = 33.1 bits (66), Expect = 1.8
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = -2 / -2
Query: 295 EEDAGAGHVAVLGEDVAGGAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVPVGDA 134
E D G A L E V G H G + G H V G P V E VG A
Sbjct: 216 ERDEVGGFEAELAEHVEEGCHVGGRPREAGAHCVPCGEPCAVAAAEGHAVVGPA 55
>gb|CK122651.1|CK122651 BES1824104o18 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010O184 5-PRIME, mRNA sequence
Length = 360
Score = 33.1 bits (66), Expect = 1.8
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = -2 / -2
Query: 295 EEDAGAGHVAVLGEDVAGGAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVPVGDA 134
E D G A L E V G H G + G H V G P V E VG A
Sbjct: 239 ERDEVGGFEAELAEHVEEGCHVGGRPREAGAHCVPCGEPCAVAAAEGHAVVGPA 78
>gb|CK122767.1|CK122767 BES1824105l08 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010L085 5-PRIME, mRNA sequence
Length = 684
Score = 33.1 bits (66), Expect = 1.8
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = -2 / -1
Query: 295 EEDAGAGHVAVLGEDVAGGAHPGLVQPDLGLHLVEDGGPAGVRHPEDGVPVGDA 134
E D G A L E V G H G + G H V G P V E VG A
Sbjct: 192 ERDEVGGFEAELAEHVEEGCHVGGRPREAGAHCVPCGEPCAVAAAEGHAVVGPA 31
>gb|CA008315.1|CA008315 HU10J08r HU Hordeum vulgare subsp. vulgare cDNA clone HU10J08
5-PRIME, mRNA sequence
Length = 516
Score = 30.4 bits (60), Expect(2) = 1.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGSPSTCSRTC 77
C RR+PST ++RW +T +C
Sbjct: 109 CTARRSPSTPRTSRWAPGATTPPSC 183
Score = 21.7 bits (41), Expect(2) = 1.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +1
Query: 183 PPSSTRWRPRS 215
PP S R RPRS
Sbjct: 232 PPPSARCRPRS 264
>gb|AV914745.1|AV914745 AV914745 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7o02 5', mRNA sequence
Length = 532
Score = 30.4 bits (60), Expect(2) = 1.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3 / +2
Query: 3 CPTRRAPSTATSARWGSPSTCSRTC 77
C RR+PST ++RW +T +C
Sbjct: 83 CTARRSPSTPRTSRWAPGATTPPSC 157
Score = 21.7 bits (41), Expect(2) = 1.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +2
Query: 183 PPSSTRWRPRS 215
PP S R RPRS
Sbjct: 206 PPPSARCRPRS 238
>gb|BJ464444.1|BJ464444 BJ464444 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34f21 5', mRNA sequence
Length = 534
Score = 30.4 bits (60), Expect(2) = 1.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3 / +2
Query: 3 CPTRRAPSTATSARWGSPSTCSRTC 77
C RR+PST ++RW +T +C
Sbjct: 107 CTARRSPSTPRTSRWAPGATTPPSC 181
Score = 21.7 bits (41), Expect(2) = 1.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +2
Query: 183 PPSSTRWRPRS 215
PP S R RPRS
Sbjct: 230 PPPSARCRPRS 262
>gb|AV915509.1|AV915509 AV915509 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14n14 5', mRNA sequence
Length = 552
Score = 30.4 bits (60), Expect(2) = 1.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3 / +1
Query: 3 CPTRRAPSTATSARWGSPSTCSRTC 77
C RR+PST ++RW +T +C
Sbjct: 100 CTARRSPSTPRTSRWAPGATTPPSC 174
Score = 21.7 bits (41), Expect(2) = 1.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +1
Query: 183 PPSSTRWRPRS 215
PP S R RPRS
Sbjct: 223 PPPSARCRPRS 255
>gb|BM369028.2|BM369028 EBem07_SQ002_F14_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ002_F14 5', mRNA sequence
Length = 554
Score = 30.4 bits (60), Expect(2) = 1.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3 / +3
Query: 3 CPTRRAPSTATSARWGSPSTCSRTC 77
C RR+PST ++RW +T +C
Sbjct: 99 CTARRSPSTPRTSRWAPGATTPPSC 173
Score = 21.7 bits (41), Expect(2) = 1.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +3
Query: 183 PPSSTRWRPRS 215
PP S R RPRS
Sbjct: 222 PPPSARCRPRS 254
>gb|BI947080.1|BI947080 HVSMEl0003J03f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0003J03f, mRNA sequence
Length = 1081
Score = 25.8 bits (50), Expect(2) = 1.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3 / -3
Query: 372 RTPQSRPSPVVACPSSAERL 313
R S PSPVV+C +SA L
Sbjct: 65 RPSPSAPSPVVSCSASAAGL 6
Score = 24.4 bits (47), Expect(2) = 1.9
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -3 / -3
Query: 417 WSTTVSTVSPGPKPKRTPQSRPSP 346
W + + SP P TP S P P
Sbjct: 185 WRSRSGSTSPAPGAPCTPASPPGP 114
>gb|BU980787.1|BU980787 HA21L04r HA Hordeum vulgare subsp. vulgare cDNA clone HA21L04
5-PRIME, mRNA sequence
Length = 557
Score = 30.4 bits (60), Expect(2) = 1.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3 / +3
Query: 3 CPTRRAPSTATSARWGSPSTCSRTC 77
C RR+PST ++RW +T +C
Sbjct: 87 CTARRSPSTPRTSRWAPGATTPPSC 161
Score = 21.7 bits (41), Expect(2) = 1.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +3
Query: 183 PPSSTRWRPRS 215
PP S R RPRS
Sbjct: 210 PPPSARCRPRS 242
>gb|BF631136.2|BF631136 HVSMEb0015B07f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0015B07f, mRNA sequence
Length = 758
Score = 24.0 bits (46), Expect(3) = 1.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3 / +1
Query: 15 RAPSTATSARWGSPSTCSRTCP 80
RAP++ T++ G+ T TCP
Sbjct: 238 RAPASTTNSPSGTALTGGSTCP 303
Score = 23.5 bits (45), Expect(3) = 1.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1 / +2
Query: 250 RPLRVRQHVQRLRPLHP 300
RP RQH Q LR HP
Sbjct: 539 RPAP*RQHPQLLRQQHP 589
Score = 21.7 bits (41), Expect(3) = 1.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2 / +1
Query: 314 KRSAEDGQATTGEGLDW 364
K S+ + +TTG DW
Sbjct: 619 KSSSSEAPSTTGSPTDW 669
>gb|BQ471657.1|BQ471657 HV03B06r HV Hordeum vulgare subsp. vulgare cDNA clone HV03B06
5-PRIME, mRNA sequence
Length = 412
Score = 26.3 bits (51), Expect(2) = 2.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3 / +2
Query: 390 PGPKPKRTPQSRPSP 346
P PKPK P+++P P
Sbjct: 191 PKPKPKPKPKAKPEP 235
Score = 25.4 bits (49), Expect(2) = 2.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3 / +3
Query: 84 SPGTSLSRWKVSPTSRR 34
S S S+W+V+PT+RR
Sbjct: 255 SRSPSQSQWRVNPTTRR 305
>gb|BE196148.3|BE196148 HVSMEh0091H22f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091H22f, mRNA sequence
Length = 937
Score = 25.8 bits (50), Expect(2) = 2.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3 / -1
Query: 372 RTPQSRPSPVVACPSSAERL 313
R S PSPVV+C +SA L
Sbjct: 85 RPSPSAPSPVVSCSASAAGL 26
Score = 24.4 bits (47), Expect(2) = 2.0
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -3 / -1
Query: 417 WSTTVSTVSPGPKPKRTPQSRPSP 346
W + + SP P TP S P P
Sbjct: 205 WRSRSGSTSPAPGAPCTPASPPGP 134
>gb|BF623084.2|BF623084 HVSMEa0014B24f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0014B24f, mRNA sequence
Length = 846
Score = 25.8 bits (50), Expect(2) = 2.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3 / -2
Query: 372 RTPQSRPSPVVACPSSAERL 313
R S PSPVV+C +SA L
Sbjct: 104 RPSPSAPSPVVSCSASAAGL 45
Score = 24.4 bits (47), Expect(2) = 2.0
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -3 / -2
Query: 417 WSTTVSTVSPGPKPKRTPQSRPSP 346
W + + SP P TP S P P
Sbjct: 224 WRSRSGSTSPAPGAPCTPASPPGP 153
>gb|BI956668.1|BI956668 HVSMEn0004K20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0004K20f, mRNA sequence
Length = 838
Score = 26.7 bits (52), Expect(2) = 2.0
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -3 / +1
Query: 444 AAPVVMGTLWSTTVSTVSPGPKPKRTPQSRPSPVVA 337
AAP W++ +SP P R P PS A
Sbjct: 211 AAPPHSAPAWASPRRRLSPRPSRSRRPHPAPSSTTA 318
Score = 23.5 bits (45), Expect(2) = 2.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2 / +3
Query: 316 LAHLVEDEEDAGAG 275
L+HL E ED GAG
Sbjct: 420 LSHLCEGAEDRGAG 461
>gb|BF631596.2|BF631596 HVSMEb0016I20f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0016I20f, mRNA sequence
Length = 814
Score = 27.6 bits (54), Expect(2) = 2.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3 / -3
Query: 237 RILALSSPTLASTWSRMAGPPGCA 166
R L L +A T S AGPPGCA
Sbjct: 401 RQLRLGVLPVAHTNSESAGPPGCA 330
Score = 22.6 bits (43), Expect(2) = 2.0
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -3 / -2
Query: 390 PGPKPKRTPQSRPSPVVACP 331
P P P P P+P A P
Sbjct: 576 PAPAPPHPPSPPPAPPAAPP 517
>gb|BU986674.1|BU986674 HF12J10r HF Hordeum vulgare subsp. vulgare cDNA clone HF12J10
5-PRIME, mRNA sequence
Length = 568
Score = 30.4 bits (60), Expect(2) = 2.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3 / +2
Query: 3 CPTRRAPSTATSARWGSPSTCSRTC 77
C RR+PST ++RW +T +C
Sbjct: 68 CTARRSPSTPRTSRWAPGATTPPSC 142
Score = 21.7 bits (41), Expect(2) = 2.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +2
Query: 183 PPSSTRWRPRS 215
PP S R RPRS
Sbjct: 191 PPPSARCRPRS 223
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 310,957,182
Number of Sequences: 312970
Number of extensions: 4864657
Number of successful extensions: 112586
Number of sequences better than 10.0: 877
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 8568175218
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)