TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716424.2.5
(1999 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare s... 219 1e-078
gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA li... 218 1e-074
gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA li... 214 5e-072
gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA li... 190 3e-070
gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA li... 218 6e-068
gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA li... 218 2e-067
gb|BF627742.1|BF627742 HVSMEb0005K21f Hordeum vulgare seedl... 188 3e-067
gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA li... 176 3e-067
gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA li... 218 3e-067
gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA li... 218 4e-066
gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA li... 218 6e-065
gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA li... 218 6e-065
gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA li... 218 1e-063
gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA li... 218 1e-063
gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA li... 218 1e-063
gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA li... 218 1e-061
gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedl... 200 3e-061
gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA li... 208 1e-059
gb|BF261803.3|BF261803 HV_CEa0002E08f Hordeum vulgare seedl... 133 4e-059
gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedl... 91 7e-059
gb|BG301073.1|BG301073 HVSMEb0019H09f Hordeum vulgare seedl... 186 8e-059
gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA li... 207 2e-058
gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA li... 214 3e-058
gb|BE420993.1|BE420993 HWM004.F10 ITEC HWM Barley Leaf Libr... 147 4e-058
gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA li... 204 5e-058
gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA li... 204 5e-058
gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA li... 204 5e-058
gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA li... 204 5e-058
gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA li... 203 7e-058
gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA li... 200 5e-057
gb|BQ471556.1|BQ471556 HV02M13r HV Hordeum vulgare subsp. v... 118 5e-057
gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA li... 202 1e-055
gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA li... 208 3e-055
gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA li... 191 1e-054
gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P4... 82 1e-054
gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA li... 181 1e-054
gb|BF621561.1|BF621561 HVSMEa0011G21f Hordeum vulgare seedl... 182 2e-054
emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for p... 82 2e-054
gb|BE214490.1|BE214490 HV_CEb0003J19f Hordeum vulgare seedl... 135 5e-054
gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA li... 188 1e-053
gb|BM816704.1|BM816704 HB01G04_T3.ab1 HB Hordeum vulgare su... 104 1e-052
gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA li... 182 2e-052
gb|AV934105.1|AV934105 AV934105 K. Sato unpublished cDNA li... 143 3e-052
gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA li... 182 8e-052
gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. v... 179 1e-051
gb|AV934098.1|AV934098 AV934098 K. Sato unpublished cDNA li... 114 1e-051
gb|BE602159.2|BE602159 HVSMEh0102M13f Hordeum vulgare 5-45 ... 91 9e-051
gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA li... 200 2e-050
gb|CA017939.1|CA017939 HV06O02r HV Hordeum vulgare subsp. v... 142 3e-050
gb|AV918446.1|AV918446 AV918446 K. Sato unpublished cDNA li... 176 5e-050
gb|AV918673.1|AV918673 AV918673 K. Sato unpublished cDNA li... 175 6e-050
gb|AV913374.1|AV913374 AV913374 K. Sato unpublished cDNA li... 175 6e-050
gb|CA018489.1|CA018489 HV08M10r HV Hordeum vulgare subsp. v... 198 1e-049
gb|AV915851.1|AV915851 AV915851 K. Sato unpublished cDNA li... 78 6e-048
gb|CA009631.1|CA009631 HU14K18r HU Hordeum vulgare subsp. v... 125 7e-048
gb|AV932347.1|AV932347 AV932347 K. Sato unpublished cDNA li... 143 6e-047
gb|AV934261.1|AV934261 AV934261 K. Sato unpublished cDNA li... 143 6e-047
gb|AV921548.1|AV921548 AV921548 K. Sato unpublished cDNA li... 145 8e-047
gb|BI952196.1|BI952196 HVSMEm0004P09f Hordeum vulgare green... 98 7e-046
gb|AV923778.1|AV923778 AV923778 K. Sato unpublished cDNA li... 182 8e-045
gb|CA019109.1|CA019109 HV10M21r HV Hordeum vulgare subsp. v... 182 8e-045
gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa... 106 3e-044
gb|BG344914.2|BG344914 HVSMEg0016N10f Hordeum vulgare pre-a... 151 7e-044
gb|BF065379.1|BF065379 HV_CEb0012E10f Hordeum vulgare seedl... 155 7e-044
gb|AV912854.1|AV912854 AV912854 K. Sato unpublished cDNA li... 126 2e-043
gb|BE196002.1|BE196002 HVSMEh0091B12f Hordeum vulgare 5-45 ... 152 3e-043
gb|BJ460485.1|BJ460485 BJ460485 K. Sato unpublished cDNA li... 169 8e-043
gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA li... 110 2e-042
gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA li... 148 2e-042
gb|CA013705.1|CA013705 HT09E03r HT Hordeum vulgare subsp. v... 73 4e-042
gb|BG300331.1|BG300331 HVSMEb0012I19f Hordeum vulgare seedl... 172 6e-042
gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA li... 110 2e-041
gb|BJ547149.1|BJ547149 BJ547149 K. Sato unpublished cDNA li... 104 1e-040
gb|CA015705.1|CA015705 HV12J09u HV Hordeum vulgare subsp. v... 145 1e-040
gb|BF259778.3|BF259778 HVSMEf0020D20f Hordeum vulgare seedl... 123 2e-040
gb|AV930901.1|AV930901 AV930901 K. Sato unpublished cDNA li... 142 6e-040
gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA li... 93 7e-040
gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. v... 93 1e-039
gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA li... 93 2e-039
gb|BG299744.1|BG299744 HVSMEa0021K06f Hordeum vulgare seedl... 139 4e-039
gb|BJ461185.1|BJ461185 BJ461185 K. Sato unpublished cDNA li... 147 1e-038
gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA li... 93 3e-038
gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA li... 122 5e-038
gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachi... 113 2e-037
gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA li... 93 6e-037
gb|BE216646.1|BE216646 HV_CEb0011B08f Hordeum vulgare seedl... 116 1e-036
gb|AV925764.1|AV925764 AV925764 K. Sato unpublished cDNA li... 154 1e-036
gb|CB880227.1|CB880227 HM05O04w HM Hordeum vulgare subsp. v... 100 2e-036
gb|BF253422.2|BF253422 HVSMEf0001G02f Hordeum vulgare seedl... 114 2e-036
gb|AV917238.1|AV917238 AV917238 K. Sato unpublished cDNA li... 100 2e-036
gb|BI776301.2|BI776301 EBem04_SQ001_H10_R embryo, 12 DPA, n... 113 2e-036
gb|CA012725.1|CA012725 HT06E05r HT Hordeum vulgare subsp. v... 117 6e-036
gb|BG416486.2|BG416486 HVSMEk0012I14f Hordeum vulgare testa... 109 1e-035
gb|AJ434580.1|AJ434580 AJ434580 S00002 Hordeum vulgare subs... 109 1e-035
gb|BJ463196.1|BJ463196 BJ463196 K. Sato unpublished cDNA li... 107 3e-035
gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedl... 94 4e-035
gb|BF627303.3|BF627303 HVSMEb0004I01f Hordeum vulgare seedl... 93 5e-035
gb|AV922397.1|AV922397 AV922397 K. Sato unpublished cDNA li... 93 5e-035
gb|BJ466913.1|BJ466913 BJ466913 K. Sato unpublished cDNA li... 93 5e-035
gb|AV919240.1|AV919240 AV919240 K. Sato unpublished cDNA li... 93 5e-035
gb|AV922497.1|AV922497 AV922497 K. Sato unpublished cDNA li... 93 5e-035
gb|AV919113.1|AV919113 AV919113 K. Sato unpublished cDNA li... 93 5e-035
gb|AV917809.1|AV917809 AV917809 K. Sato unpublished cDNA li... 93 5e-035
gb|BE195199.3|BE195199 HVSMEh0088J02f Hordeum vulgare 5-45 ... 68 8e-035
gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedl... 89 9e-035
gb|BU999462.1|BU999462 HI14J11r HI Hordeum vulgare subsp. v... 88 2e-034
gb|AV925268.1|AV925268 AV925268 K. Sato unpublished cDNA li... 147 2e-034
gb|BQ461073.1|BQ461073 HE01E18r HE Hordeum vulgare subsp. v... 77 3e-034
gb|AU252324.1|AU252324 AU252324 salt-stressed barley root c... 73 6e-034
gb|BI960706.1|BI960706 HVSMEn0001B07f Hordeum vulgare rachi... 122 2e-033
gb|BF253916.1|BF253916 HVSMEf0002H19f Hordeum vulgare seedl... 140 2e-033
gb|AU252315.1|AU252315 AU252315 salt-stressed barley root c... 92 4e-033
gb|BE519761.3|BE519761 HV_CEb0021C04f Hordeum vulgare seedl... 75 2e-032
gb|AV913156.1|AV913156 AV913156 K. Sato unpublished cDNA li... 78 3e-032
gb|AV931728.1|AV931728 AV931728 K. Sato unpublished cDNA li... 96 4e-032
gb|BJ464550.1|BJ464550 BJ464550 K. Sato unpublished cDNA li... 93 5e-032
gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA li... 93 2e-031
gb|CA006248.1|CA006248 HU14K18u HU Hordeum vulgare subsp. v... 121 6e-031
gb|AV917240.1|AV917240 AV917240 K. Sato unpublished cDNA li... 79 8e-031
gb|AV922407.1|AV922407 AV922407 K. Sato unpublished cDNA li... 79 8e-031
gb|BM443957.2|BM443957 EBem09_SQ002_E09_R embryo, 1 Day ger... 112 9e-031
gb|AV916579.1|AV916579 AV916579 K. Sato unpublished cDNA li... 61 1e-030
gb|AV917724.1|AV917724 AV917724 K. Sato unpublished cDNA li... 77 4e-030
gb|BG365432.1|BG365432 HVSMEi0002K17f Hordeum vulgare 20 DA... 101 7e-030
gb|CA009374.1|CA009374 HU13P05r HU Hordeum vulgare subsp. v... 66 1e-029
gb|CA030582.1|CA030582 HX07H18r HX Hordeum vulgare subsp. v... 104 2e-029
gb|BJ547848.1|BJ547848 BJ547848 K. Sato unpublished cDNA li... 128 8e-029
gb|BE519743.1|BE519743 HV_CEb0021A21f Hordeum vulgare seedl... 71 8e-029
gb|AL504160.1|AL504160 AL504160 Hordeum vulgare Barke roots... 69 1e-028
gb|CA028447.1|CA028447 HZ61P23r HZ Hordeum vulgare subsp. v... 87 2e-028
gb|CA016039.1|CA016039 HV10M21u HV Hordeum vulgare subsp. v... 97 2e-028
gb|BM817083.1|BM817083 HC01F04_T3.ab1 HC Hordeum vulgare su... 108 3e-028
gb|CA019622.1|CA019622 HV12J09r HV Hordeum vulgare subsp. v... 100 3e-028
gb|CA025677.1|CA025677 HZ52M20r HZ Hordeum vulgare subsp. v... 99 3e-028
gb|AV928038.1|AV928038 AV928038 K. Sato unpublished cDNA li... 76 5e-028
gb|BM101180.2|BM101180 EBpi01_SQ003_C01_R pistil, 1 DPA, no... 68 1e-027
gb|BJ475646.1|BJ475646 BJ475646 K. Sato unpublished cDNA li... 80 6e-027
gb|BQ758724.1|BQ758724 EBma07_SQ002_J15_R maternal, 21 DPA,... 98 8e-027
gb|BF066135.3|BF066135 HV_CEb0014P04f Hordeum vulgare seedl... 64 1e-026
gb|BI955765.1|BI955765 HVSMEm0024G17f Hordeum vulgare green... 87 2e-026
gb|BQ664209.1|BQ664209 HV02F12u HV Hordeum vulgare subsp. v... 96 3e-026
gb|BJ466231.1|BJ466231 BJ466231 K. Sato unpublished cDNA li... 67 3e-026
gb|AV912967.1|AV912967 AV912967 K. Sato unpublished cDNA li... 51 4e-026
gb|BQ767330.1|BQ767330 EBro08_SQ008_H18_R root, 3 week, dro... 100 7e-026
gb|AU252316.1|AU252316 AU252316 salt-stressed barley root c... 73 1e-025
gb|AV918924.1|AV918924 AV918924 K. Sato unpublished cDNA li... 67 1e-025
gb|BJ465805.1|BJ465805 BJ465805 K. Sato unpublished cDNA li... 67 1e-025
gb|BQ664118.1|BQ664118 HV01P03w HV Hordeum vulgare subsp. v... 67 1e-025
gb|CA019349.1|CA019349 HV11L11r HV Hordeum vulgare subsp. v... 93 3e-025
gb|CA018612.1|CA018612 HV09C09r HV Hordeum vulgare subsp. v... 73 5e-025
gb|CA016903.1|CA016903 HV05M12u HV Hordeum vulgare subsp. v... 69 5e-025
gb|CA012057.1|CA012057 HT04F04r HT Hordeum vulgare subsp. v... 60 7e-025
gb|BI777730.2|BI777730 EBro08_SQ001_K12_R root, 3 week, dro... 88 1e-024
gb|BI958239.1|BI958239 HVSMEn0014A11f Hordeum vulgare rachi... 102 1e-024
gb|BF624750.2|BF624750 HVSMEa0017K07f Hordeum vulgare seedl... 105 8e-024
gb|BJ464493.1|BJ464493 BJ464493 K. Sato unpublished cDNA li... 74 8e-024
gb|BQ458589.1|BQ458589 HA04M20r HA Hordeum vulgare subsp. v... 87 1e-023
gb|AV922276.1|AV922276 AV922276 K. Sato unpublished cDNA li... 90 2e-023
gb|AV918105.1|AV918105 AV918105 K. Sato unpublished cDNA li... 61 4e-023
gb|BF260290.3|BF260290 HVSMEf0021J18f Hordeum vulgare seedl... 85 5e-023
gb|BF627063.2|BF627063 HVSMEb0002G10f Hordeum vulgare seedl... 86 5e-023
gb|CA005397.1|CA005397 HU10K20u HU Hordeum vulgare subsp. v... 98 5e-023
gb|BE519751.1|BE519751 HV_CEb0021B09f Hordeum vulgare seedl... 100 7e-023
gb|BF254550.2|BF254550 HVSMEf0004F12f Hordeum vulgare seedl... 107 8e-023
gb|BF631513.2|BF631513 HVSMEb0016D19f Hordeum vulgare seedl... 84 1e-022
gb|AV920535.1|AV920535 AV920535 K. Sato unpublished cDNA li... 67 4e-022
gb|AV928880.1|AV928880 AV928880 K. Sato unpublished cDNA li... 85 4e-022
gb|AU252309.1|AU252309 AU252309 salt-stressed barley root c... 98 6e-022
gb|BQ664275.1|BQ664275 HV02K08u HV Hordeum vulgare subsp. v... 64 6e-022
gb|BI951511.1|BI951511 HVSMEm0001D04f Hordeum vulgare green... 62 8e-022
gb|CA017757.1|CA017757 HV06C16r HV Hordeum vulgare subsp. v... 67 8e-022
gb|AV833831.1|AV833831 AV833831 K. Sato unpublished cDNA li... 105 9e-022
gb|BI779253.2|BI779253 EBro01_SQ003_H11_R root, 3 week, hyd... 86 1e-021
gb|BI952928.1|BI952928 HVSMEm0008H17f Hordeum vulgare green... 74 1e-021
gb|AJ436646.1|AJ436646 AJ436646 S00002 Hordeum vulgare subs... 77 2e-021
gb|AV922603.1|AV922603 AV922603 K. Sato unpublished cDNA li... 77 2e-021
gb|AV921527.1|AV921527 AV921527 K. Sato unpublished cDNA li... 77 2e-021
gb|BQ471971.1|BQ471971 HV04A16r HV Hordeum vulgare subsp. v... 67 2e-021
gb|BM443441.2|BM443441 EBro02_SQ005_C13_R root, 3 week, hyd... 94 5e-021
gb|BU995588.1|BU995588 HM10L15r HM Hordeum vulgare subsp. v... 100 7e-021
gb|BF624213.1|BF624213 HVSMEa0012L22f Hordeum vulgare seedl... 62 7e-021
gb|BG301293.2|BG301293 HVSMEb0020I08f Hordeum vulgare seedl... 87 7e-021
>gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB105E09_SK.ab1 similar to Steroid
17-alpha-monooxygenase,Unspecific monooxygenase, mRNA
sequence
Length = 884
Score = 219 bits (473), Expect(3) = 1e-078
Identities = 80/132 (60%), Positives = 103/132 (78%)
Frame = -2 / +2
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
+++ E D+ M YL+A IKE+LRLHP AP L+PH + D IDGY VPAGT VL+N WA+
Sbjct: 251 EVVTEADISKMTYLRAVIKESLRLHPVAPLLVPHLAMIDGNIDGYMVPAGTHVLINVWAI 430
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
GRD + WE+ EEF+PERF+ E A V+ KG D +F+PFG+GRR+CPG+N G AT+E+ML
Sbjct: 431 GRDSSYWEEAEEFIPERFLDEGSAAGVNFKGNDFQFLPFGAGRRMCPGINLGIATVELML 610
Query: 396 ANLMYHFDWEVP 361
ANLMYHFDWE+P
Sbjct: 611 ANLMYHFDWELP 646
Score = 116 bits (248), Expect(2) = 6e-034
Identities = 57/119 (47%), Positives = 67/119 (56%)
Frame = +2 / -3
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G SQSKWY++ A++ S VA P+FIPG ILRP PNG N +S P T A S N SGMN
Sbjct: 645 GNSQSKWYIKFANISSTVAIPRFIPGHILRPAPNGKNWKSFPLKLTPAALPSSRNLSGMN 466
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SS S + SLP A L +T VPAGT PS+ S + S S M ALR
Sbjct: 465 SSASSQ*LESLPMAHTLIKTCVPAGTMYPSMLPSIIARCGTSKGATG*SRSDSFMTALR 289
Score = 74.4 bits (156), Expect(3) = 1e-078
Identities = 31/71 (43%), Positives = 50/71 (70%)
Frame = -2 / +2
Query: 987 EESEADFIHVLLSIQQEYGLTTDNLKAILVDMFEAGIETSYLTLEYGMAELINNRHVMEK 808
+ + +F+ +LLS+Q EYGLT +++KA+L D+F ETS TLE+ +AEL+ + ++ K
Sbjct: 32 DRTGGNFVDILLSVQMEYGLTKEDMKALLTDVFFGSTETSSNTLEFTLAELVRSPCLIGK 211
Query: 807 LQTEVRTTMRS 775
LQ EVR+ + S
Sbjct: 212 LQDEVRSIVPS 244
Score = 49.2 bits (101), Expect(2) = 6e-034
Identities = 27/62 (43%), Positives = 34/62 (54%)
Frame = +2 / -3
Query: 785 VVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPASNMSTKMALRLSVVRPYSCCMESRTC 964
++LTS CSF + LL SSA S V DVS+ N S + A S VRPYS ++R
Sbjct: 234 ILLTSSCSFPIKHGLLTSSAKVNSRVLDDVSVEPKNTSVRRAFMSSFVRPYSI*TDNRIS 55
Query: 965 MK 970
K
Sbjct: 54 TK 49
Score = 40.5 bits (82), Expect(3) = 1e-078
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = -2 / +2
Query: 345 VSMDESFGLTLRRKEKLLLVPR 280
++M E FGLT+RRKEKL+LVP+
Sbjct: 668 INMTELFGLTMRRKEKLMLVPK 733
>gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5k12 3', mRNA sequence
Length = 774
Score = 218 bits (470), Expect(3) = 1e-074
Identities = 80/132 (60%), Positives = 105/132 (79%)
Frame = -2 / -3
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRLHP AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 601 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 422
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
GRD ++WE PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN G A +E+ML
Sbjct: 421 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 242
Query: 396 ANLMYHFDWEVP 361
ANL+ HFDWE+P
Sbjct: 241 ANLVCHFDWELP 206
Score = 122 bits (262), Expect(3) = 1e-037
Identities = 59/119 (49%), Positives = 70/119 (58%)
Frame = +2 / +3
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+SQSKW+ R A++ S A P+FIPG ILRP PNG N +S P S N SGMN
Sbjct: 207 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 386
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SSG+S + SLP A ALT TRVPAGT PS+ +SA+ S S M ALR
Sbjct: 387 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALR 563
Score = 62.5 bits (130), Expect(3) = 1e-074
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = -2 / -3
Query: 939 EYGLTTDNLKAILVDMFEAGIETSYLTLEYGMAELINNRHVMEKLQTEVR 790
EY LT +++KA+L D+F I+TS LE+ +AEL+ H+MEKLQ EVR
Sbjct: 772 EYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVR 623
Score = 50.1 bits (103), Expect(3) = 1e-037
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = +2 / +3
Query: 785 VVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPASNMSTKMALRLSVVRPYS 940
+ LTS CSFS+ C LLMSSA S DVSI S + A S+VR YS
Sbjct: 618 IPLTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYS 773
Score = 40.5 bits (82), Expect(3) = 1e-074
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / -3
Query: 345 VSMDESFGLTLRRKEKLLLVPR 280
+ M E FGLT+RRKEKLLLVP+
Sbjct: 184 IDMTEVFGLTVRRKEKLLLVPK 119
Score = 23.5 bits (45), Expect(3) = 1e-037
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1 / +2
Query: 283 WNKEKLLLPAKRQPKGLVH 339
WN++ LLP PK L H
Sbjct: 122 WNQQ*FLLPTDG*PKHLCH 178
>gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33l17 3', mRNA sequence
Length = 689
Score = 214 bits (462), Expect(3) = 5e-072
Identities = 79/132 (59%), Positives = 104/132 (78%)
Frame = -2 / -1
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRL P AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 515 EIISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 336
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
GRD ++WE PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN G A +E+ML
Sbjct: 335 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 156
Query: 396 ANLMYHFDWEVP 361
ANL+ HFDWE+P
Sbjct: 155 ANLVCHFDWELP 120
Score = 123 bits (263), Expect(2) = 3e-036
Identities = 59/119 (49%), Positives = 70/119 (58%)
Frame = +2 / +1
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+SQSKW+ R A++ S A P+FIPG ILRP PNG N +S P S N SGMN
Sbjct: 121 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 300
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SSG+S + SLP A ALT TRVPAGT PS+ +SA+ S S M ALR
Sbjct: 301 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALR 477
Score = 64.8 bits (135), Expect(3) = 5e-072
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = -2 / -1
Query: 942 QEYGLTTDNLKAILVDMFEAGIETSYLTLEYGMAELINNRHVMEKLQTEVR 790
QEY LT +++KA+L D+F I+TS LE+ +AEL+ H+MEKLQ EVR
Sbjct: 689 QEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVR 537
Score = 50.1 bits (103), Expect(2) = 3e-036
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = +2 / +1
Query: 785 VVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPASNMSTKMALRLSVVRPYS 940
+ LTS CSFS+ C LLMSSA S DVSI S + A S+VR YS
Sbjct: 532 IPLTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYS 687
Score = 32.7 bits (65), Expect(3) = 5e-072
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -1
Query: 345 VSMDESFGLTLRRKEKLL 292
+ M E FGLT+RRKEKLL
Sbjct: 98 IDMTEVFGLTVRRKEKLL 45
>gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33l17 5', mRNA sequence
Length = 689
Score = 190 bits (409), Expect(3) = 3e-070
Identities = 71/121 (58%), Positives = 94/121 (77%)
Frame = -2 / +2
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRL P AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 326 EIISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 505
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
GRD ++WE PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN G A +E+ML
Sbjct: 506 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 685
Query: 396 A 394
A
Sbjct: 686 A 688
Score = 104 bits (221), Expect(2) = 2e-033
Identities = 52/108 (48%), Positives = 61/108 (56%)
Frame = +2 / -3
Query: 395 ASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMNSSGFSHVVRSL 574
A++ S A P+FIPG ILRP PNG N +S P S N SGMNSSG+S + SL
Sbjct: 687 ANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMNSSGYSQELGSL 508
Query: 575 PSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
P A ALT TRVPAGT PS+ +SA+ S S M ALR
Sbjct: 507 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALR 364
Score = 83.5 bits (176), Expect(3) = 3e-070
Identities = 33/67 (49%), Positives = 49/67 (73%)
Frame = -2 / +2
Query: 990 SEESEADFIHVLLSIQQEYGLTTDNLKAILVDMFEAGIETSYLTLEYGMAELINNRHVME 811
S+ + DF+ ++LS+QQEY LT +++KA+L D+F I+TS LE+ +AEL+ H+ME
Sbjct: 104 SDHKDDDFVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMME 283
Query: 810 KLQTEVR 790
KLQ EVR
Sbjct: 284 KLQDEVR 304
Score = 59.7 bits (124), Expect(2) = 2e-033
Identities = 31/66 (46%), Positives = 38/66 (57%)
Frame = +2 / -3
Query: 785 VVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPASNMSTKMALRLSVVRPYSCCMESRTC 964
+ LTS CSFS+ C LLMSSA S DVSI S + A S+VR YSC ++
Sbjct: 309 IPLTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYSCWTDNIIS 130
Query: 965 MKSASL 982
KS+SL
Sbjct: 129 TKSSSL 112
Score = 32.2 bits (64), Expect(3) = 3e-070
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2 / +2
Query: 1095 LLRLVSVMFRRLNQRWNDVFDELIQEHVQSR 1003
L + V +R+ RW D+ D++I +HV R
Sbjct: 2 LKKAVCAKAKRVRNRWADLLDQVIDDHVSKR 94
>gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 3', mRNA sequence
Length = 683
Score = 218 bits (470), Expect(3) = 6e-068
Identities = 80/132 (60%), Positives = 105/132 (79%)
Frame = -2 / -2
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRLHP AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 571 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 392
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
GRD ++WE PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN G A +E+ML
Sbjct: 391 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 212
Query: 396 ANLMYHFDWEVP 361
ANL+ HFDWE+P
Sbjct: 211 ANLVCHFDWELP 176
Score = 122 bits (262), Expect(3) = 6e-034
Identities = 59/119 (49%), Positives = 70/119 (58%)
Frame = +2 / +3
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+SQSKW+ R A++ S A P+FIPG ILRP PNG N +S P S N SGMN
Sbjct: 177 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 356
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SSG+S + SLP A ALT TRVPAGT PS+ +SA+ S S M ALR
Sbjct: 357 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALR 533
Score = 40.5 bits (82), Expect(3) = 6e-068
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / -2
Query: 345 VSMDESFGLTLRRKEKLLLVPR 280
+ M E FGLT+RRKEKLLLVP+
Sbjct: 154 IDMTEVFGLTVRRKEKLLLVPK 89
Score = 39.6 bits (80), Expect(3) = 6e-068
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = -2 / -2
Query: 879 IETSYLTLEYGMAELINNRHVMEKLQTEVR 790
I+TS LE+ +AEL+ H+MEKLQ EVR
Sbjct: 682 IDTSANVLEFTLAELMRRPHMMEKLQDEVR 593
Score = 37.3 bits (75), Expect(3) = 6e-034
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +2 / +3
Query: 785 VVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSI 880
+ LTS CSFS+ C LLMSSA S DVSI
Sbjct: 588 IPLTSSCSFSIMCGLLMSSAKVNSRTLADVSI 683
Score = 23.5 bits (45), Expect(3) = 6e-034
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1 / +2
Query: 283 WNKEKLLLPAKRQPKGLVH 339
WN++ LLP PK L H
Sbjct: 92 WNQQ*FLLPTDG*PKHLCH 148
>gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22h15 3', mRNA sequence
Length = 640
Score = 218 bits (470), Expect(3) = 2e-067
Identities = 80/132 (60%), Positives = 105/132 (79%)
Frame = -2 / -1
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRLHP AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 505 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 326
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
GRD ++WE PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN G A +E+ML
Sbjct: 325 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 146
Query: 396 ANLMYHFDWEVP 361
ANL+ HFDWE+P
Sbjct: 145 ANLVCHFDWELP 110
Score = 122 bits (262), Expect(2) = 2e-032
Identities = 59/119 (49%), Positives = 70/119 (58%)
Frame = +2 / +3
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+SQSKW+ R A++ S A P+FIPG ILRP PNG N +S P S N SGMN
Sbjct: 111 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 290
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SSG+S + SLP A ALT TRVPAGT PS+ +SA+ S S M ALR
Sbjct: 291 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALR 467
Score = 46.0 bits (94), Expect(3) = 2e-067
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -2 / -1
Query: 903 LVDMFEAGIETSYLTLEYGMAELINNRHVMEKLQTEVR 790
L D+F I+TS LE+ +AEL+ H+MEKLQ EVR
Sbjct: 640 LTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVR 527
Score = 37.7 bits (76), Expect(2) = 2e-032
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = +2 / +3
Query: 785 VVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPASNMS 898
+ LTS CSFS+ C LLMSSA S DVSI S
Sbjct: 522 IPLTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTS 635
Score = 32.7 bits (65), Expect(3) = 2e-067
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -1
Query: 345 VSMDESFGLTLRRKEKLL 292
+ M E FGLT+RRKEKLL
Sbjct: 88 IDMTEVFGLTVRRKEKLL 35
>gb|BF627742.1|BF627742 HVSMEb0005K21f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0005K21f, mRNA sequence
Length = 818
Score = 188 bits (405), Expect(3) = 3e-067
Identities = 73/122 (59%), Positives = 96/122 (78%)
Frame = -2 / +3
Query: 1677 IIGHLHLIGAETHISIRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFAS 1498
+IGHLH +G H+S+R L A+HGR+GL+L+R+GAVPTL VS+P+AA AVLRT DH+FAS
Sbjct: 153 VIGHLHQVGPLPHVSLRHLAAEHGRDGLMLVRLGAVPTLVVSTPAAAQAVLRTHDHVFAS 332
Query: 1497 RPPSMAAEIIRYGPSDVAFVPYGEYWRQGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDK 1318
RP S A I+ YG +DV F PYG +WRQ +K+ TTH+L+ +KV S+RH RQ EV LV+ K
Sbjct: 333 RPHSPVAHILFYGSADVVFAPYGHHWRQVKKISTTHLLTARKVHSYRHARQHEVNLVLAK 512
Query: 1317 IR 1312
+R
Sbjct: 513 VR 518
Score = 117 bits (250), Expect(2) = 6e-030
Identities = 59/121 (48%), Positives = 69/121 (57%)
Frame = +2 / -2
Query: 1313 RILSMTSRTSSCRPWRKDCTFLVLSMCVVRSFLPCRQYSP*GTNATSEGP*RMISAAMDG 1492
R L+ T TS R WR + TFL +S VV FL RQ+ P*G TS P*+ + A +
Sbjct: 517 RTLARTRFTSCWRAWR*EWTFLAVSRWVVEIFLTWRQWWP*GAKTTSAEP*KRMWATGEW 338
Query: 1493 GRDAKMWSWVRRTASAALGEDTNRVGTAPMRRSSRPLRPCLASRSRIEMWVSAPMRWRWP 1672
G DA WS VR TA AA G +T VGTAP R S RP RPC A+R R E P RWP
Sbjct: 337 GLDANTWSCVRSTACAAAGVETTSVGTAPRRTSMRPSRPCSAARWRRETCGRGPTWCRWP 158
Query: 1673 M 1675
+
Sbjct: 157 I 155
Score = 74.8 bits (157), Expect(3) = 3e-067
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = -2 / +3
Query: 1281 VDLSDLLSGYTNDVVCRAVLGASHRNQGRNRLFSELTEINVSLLGGFNLEDYFP 1120
+D+S+LL+ + D+VC AV G S R +G + F EL E N SL+GGFNLED+FP
Sbjct: 543 LDMSELLNAFVFDIVCHAVAGNSFRERGTQQHFRELVEANASLIGGFNLEDHFP 704
Score = 35.0 bits (70), Expect(2) = 6e-030
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +2 / -2
Query: 1121 GK*SSRLNPPRRDTLISVSSLNSLFRPWFRCDAPSTARHTTS 1246
GK SSRL PP + L S SS P + P+TA HT S
Sbjct: 703 GKWSSRLKPPMSEALASTSSRKCC*VPRSLKELPATAWHTMS 578
Score = 32.7 bits (65), Expect(3) = 3e-067
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2 / +3
Query: 1119 PNMAMADVLLRLVSVMFRRLNQRWNDVFDELIQEH 1015
P + ++ +V RR+N++W + D LI EH
Sbjct: 702 PALVKLEIFRXIVCAKARRVNKQWGRLLDRLIDEH 806
>gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42e08 5', mRNA sequence
Length = 688
Score = 176 bits (378), Expect(3) = 3e-067
Identities = 65/110 (59%), Positives = 86/110 (78%)
Frame = -2 / +2
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRL P AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 356 EIISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 535
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMN 427
GRD ++WE PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN
Sbjct: 536 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMN 685
Score = 97.7 bits (207), Expect(2) = 2e-031
Identities = 48/98 (48%), Positives = 55/98 (56%)
Frame = +2 / -2
Query: 425 KFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMNSSGFSHVVRSLPSAQALTRTR 604
+FIPG ILRP PNG N +S P S N SGMNSSG+S + SLP A ALT TR
Sbjct: 687 RFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMNSSGYSQELGSLPMAHALTTTR 508
Query: 605 VPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
VPAGT PS+ +SA+ S S M ALR
Sbjct: 507 VPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALR 394
Score = 83.5 bits (176), Expect(3) = 3e-067
Identities = 33/67 (49%), Positives = 49/67 (73%)
Frame = -2 / +2
Query: 990 SEESEADFIHVLLSIQQEYGLTTDNLKAILVDMFEAGIETSYLTLEYGMAELINNRHVME 811
S+ + DF+ ++LS+QQEY LT +++KA+L D+F I+TS LE+ +AEL+ H+ME
Sbjct: 134 SDHKDDDFVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMME 313
Query: 810 KLQTEVR 790
KLQ EVR
Sbjct: 314 KLQDEVR 334
Score = 59.7 bits (124), Expect(2) = 2e-031
Identities = 31/66 (46%), Positives = 38/66 (57%)
Frame = +2 / -2
Query: 785 VVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPASNMSTKMALRLSVVRPYSCCMESRTC 964
+ LTS CSFS+ C LLMSSA S DVSI S + A S+VR YSC ++
Sbjct: 339 IPLTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYSCWTDNIIS 160
Query: 965 MKSASL 982
KS+SL
Sbjct: 159 TKSSSL 142
Score = 36.3 bits (73), Expect(3) = 3e-067
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2 / +2
Query: 1119 PNMAMADVLLRLVSVMFRRLNQRWNDVFDELIQEHVQSR 1003
P + VL + V +R+ RW D+ D++I +HV R
Sbjct: 8 PALGRVGVLKKAVCAKAKRVRNRWADLLDQVIDDHVSKR 124
>gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15n22 3', mRNA sequence
Length = 684
Score = 218 bits (470), Expect(3) = 3e-067
Identities = 80/132 (60%), Positives = 105/132 (79%)
Frame = -2 / -3
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRLHP AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 571 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 392
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
GRD ++WE PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN G A +E+ML
Sbjct: 391 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 212
Query: 396 ANLMYHFDWEVP 361
ANL+ HFDWE+P
Sbjct: 211 ANLVCHFDWELP 176
Score = 122 bits (262), Expect(3) = 4e-034
Identities = 59/119 (49%), Positives = 70/119 (58%)
Frame = +2 / +3
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+SQSKW+ R A++ S A P+FIPG ILRP PNG N +S P S N SGMN
Sbjct: 177 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 356
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SSG+S + SLP A ALT TRVPAGT PS+ +SA+ S S M ALR
Sbjct: 357 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALR 533
Score = 40.5 bits (82), Expect(3) = 3e-067
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / -3
Query: 345 VSMDESFGLTLRRKEKLLLVPR 280
+ M E FGLT+RRKEKLLLVP+
Sbjct: 154 IDMTEVFGLTVRRKEKLLLVPK 89
Score = 37.7 bits (76), Expect(3) = 4e-034
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +2 / +3
Query: 785 VVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSI 880
+ LTS CSFS+ C LLMSSA S DVSI
Sbjct: 588 IPLTSSCSFSIMCGLLMSSAKVNSXTLADVSI 683
Score = 37.3 bits (75), Expect(3) = 3e-067
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -2 / -3
Query: 879 IETSYLTLEYGMAELINNRHVMEKLQTEVR 790
I+TS E+ +AEL+ H+MEKLQ EVR
Sbjct: 682 IDTSANVXEFTLAELMRRPHMMEKLQDEVR 593
Score = 23.5 bits (45), Expect(3) = 4e-034
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1 / +2
Query: 283 WNKEKLLLPAKRQPKGLVH 339
WN++ LLP PK L H
Sbjct: 92 WNQQ*FLLPTDG*PKHLCH 148
>gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11k15 3', mRNA sequence
Length = 707
Score = 218 bits (470), Expect(3) = 4e-066
Identities = 80/132 (60%), Positives = 105/132 (79%)
Frame = -2 / -2
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRLHP AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 592 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 413
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
GRD ++WE PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN G A +E+ML
Sbjct: 412 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 233
Query: 396 ANLMYHFDWEVP 361
ANL+ HFDWE+P
Sbjct: 232 ANLVCHFDWELP 197
Score = 122 bits (262), Expect(3) = 1e-032
Identities = 59/119 (49%), Positives = 70/119 (58%)
Frame = +2 / +3
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+SQSKW+ R A++ S A P+FIPG ILRP PNG N +S P S N SGMN
Sbjct: 198 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 377
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SSG+S + SLP A ALT TRVPAGT PS+ +SA+ S S M ALR
Sbjct: 378 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALR 554
Score = 40.5 bits (82), Expect(3) = 4e-066
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / -2
Query: 345 VSMDESFGLTLRRKEKLLLVPR 280
+ M E FGLT+RRKEKLLLVP+
Sbjct: 175 IDMTEVFGLTVRRKEKLLLVPK 110
Score = 33.6 bits (67), Expect(3) = 4e-066
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -2 / -2
Query: 861 TLEYGMAELINNRHVMEKLQTEVR 790
+ E+ +AEL+ H+MEKLQ EVR
Sbjct: 685 SFEFTLAELMRRPHMMEKLQDEVR 614
Score = 32.7 bits (65), Expect(3) = 1e-032
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 785 VVLTSVCSFSMTCLLLMSSA 844
+ LTS CSFS+ C LLMSSA
Sbjct: 609 IPLTSSCSFSIMCGLLMSSA 668
Score = 23.5 bits (45), Expect(3) = 1e-032
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1 / +2
Query: 283 WNKEKLLLPAKRQPKGLVH 339
WN++ LLP PK L H
Sbjct: 113 WNQQ*FLLPTDG*PKHLCH 169
>gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16j19 3', mRNA sequence
Length = 669
Score = 218 bits (470), Expect(3) = 6e-065
Identities = 80/132 (60%), Positives = 105/132 (79%)
Frame = -2 / -2
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRLHP AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 593 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 414
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
GRD ++WE PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN G A +E+ML
Sbjct: 413 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 234
Query: 396 ANLMYHFDWEVP 361
ANL+ HFDWE+P
Sbjct: 233 ANLVCHFDWELP 198
Score = 122 bits (262), Expect(3) = 1e-032
Identities = 59/119 (49%), Positives = 70/119 (58%)
Frame = +2 / +1
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+SQSKW+ R A++ S A P+FIPG ILRP PNG N +S P S N SGMN
Sbjct: 199 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 378
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SSG+S + SLP A ALT TRVPAGT PS+ +SA+ S S M ALR
Sbjct: 379 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALR 555
Score = 40.5 bits (82), Expect(3) = 6e-065
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / -2
Query: 345 VSMDESFGLTLRRKEKLLLVPR 280
+ M E FGLT+RRKEKLLLVP+
Sbjct: 176 IDMTEVFGLTVRRKEKLLLVPK 111
Score = 32.7 bits (65), Expect(3) = 1e-032
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 785 VVLTSVCSFSMTCLLLMSSA 844
+ LTS CSFS+ C LLMSSA
Sbjct: 610 IPLTSSCSFSIMCGLLMSSA 669
Score = 29.5 bits (58), Expect(3) = 6e-065
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 843 AELINNRHVMEKLQTEVR 790
AEL+ H+MEKLQ EVR
Sbjct: 668 AELMRRPHMMEKLQDEVR 615
Score = 23.5 bits (45), Expect(3) = 1e-032
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1 / +3
Query: 283 WNKEKLLLPAKRQPKGLVH 339
WN++ LLP PK L H
Sbjct: 114 WNQQ*FLLPTDG*PKHLCH 170
>gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 3', mRNA sequence
Length = 668
Score = 218 bits (470), Expect(3) = 6e-065
Identities = 80/132 (60%), Positives = 105/132 (79%)
Frame = -2 / -1
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRLHP AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 593 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 414
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
GRD ++WE PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN G A +E+ML
Sbjct: 413 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 234
Query: 396 ANLMYHFDWEVP 361
ANL+ HFDWE+P
Sbjct: 233 ANLVCHFDWELP 198
Score = 122 bits (262), Expect(3) = 5e-032
Identities = 59/119 (49%), Positives = 70/119 (58%)
Frame = +2 / +1
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+SQSKW+ R A++ S A P+FIPG ILRP PNG N +S P S N SGMN
Sbjct: 199 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 378
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SSG+S + SLP A ALT TRVPAGT PS+ +SA+ S S M ALR
Sbjct: 379 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALR 555
Score = 40.5 bits (82), Expect(3) = 6e-065
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / -1
Query: 345 VSMDESFGLTLRRKEKLLLVPR 280
+ M E FGLT+RRKEKLLLVP+
Sbjct: 176 IDMTEVFGLTVRRKEKLLLVPK 111
Score = 30.9 bits (61), Expect(3) = 5e-032
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2 / +1
Query: 785 VVLTSVCSFSMTCLLLMSS 841
+ LTS CSFS+ C LLMSS
Sbjct: 610 IPLTSSCSFSIMCGLLMSS 666
Score = 29.5 bits (58), Expect(3) = 6e-065
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 843 AELINNRHVMEKLQTEVR 790
AEL+ H+MEKLQ EVR
Sbjct: 668 AELMRRPHMMEKLQDEVR 615
Score = 23.5 bits (45), Expect(3) = 5e-032
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1 / +3
Query: 283 WNKEKLLLPAKRQPKGLVH 339
WN++ LLP PK L H
Sbjct: 114 WNQQ*FLLPTDG*PKHLCH 170
>gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40l11 3', mRNA sequence
Length = 696
Score = 218 bits (470), Expect(3) = 1e-063
Identities = 80/132 (60%), Positives = 105/132 (79%)
Frame = -2 / -1
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRLHP AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 585 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 406
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
GRD ++WE PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN G A +E+ML
Sbjct: 405 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 226
Query: 396 ANLMYHFDWEVP 361
ANL+ HFDWE+P
Sbjct: 225 ANLVCHFDWELP 190
Score = 122 bits (262), Expect(2) = 3e-028
Identities = 59/119 (49%), Positives = 70/119 (58%)
Frame = +2 / +2
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+SQSKW+ R A++ S A P+FIPG ILRP PNG N +S P S N SGMN
Sbjct: 191 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 370
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SSG+S + SLP A ALT TRVPAGT PS+ +SA+ S S M ALR
Sbjct: 371 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALR 547
Score = 40.5 bits (82), Expect(3) = 1e-063
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / -1
Query: 345 VSMDESFGLTLRRKEKLLLVPR 280
+ M E FGLT+RRKEKLLLVP+
Sbjct: 168 IDMTEVFGLTVRRKEKLLLVPK 103
Score = 25.4 bits (49), Expect(3) = 1e-063
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2 / -2
Query: 879 IETSYLTLEYGMAELINNRHVME 811
I+TS LE+ +AEL+ H+M+
Sbjct: 695 IDTSANVLEFTLAELMRRPHMMK 627
Score = 23.5 bits (45), Expect(2) = 3e-028
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1 / +1
Query: 283 WNKEKLLLPAKRQPKGLVH 339
WN++ LLP PK L H
Sbjct: 106 WNQQ*FLLPTDG*PKHLCH 162
>gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12i23 3', mRNA sequence
Length = 669
Score = 218 bits (470), Expect(3) = 1e-063
Identities = 80/132 (60%), Positives = 105/132 (79%)
Frame = -2 / -3
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRLHP AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 598 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 419
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
GRD ++WE PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN G A +E+ML
Sbjct: 418 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 239
Query: 396 ANLMYHFDWEVP 361
ANL+ HFDWE+P
Sbjct: 238 ANLVCHFDWELP 203
Score = 122 bits (262), Expect(3) = 2e-031
Identities = 59/119 (49%), Positives = 70/119 (58%)
Frame = +2 / +3
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+SQSKW+ R A++ S A P+FIPG ILRP PNG N +S P S N SGMN
Sbjct: 204 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 383
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SSG+S + SLP A ALT TRVPAGT PS+ +SA+ S S M ALR
Sbjct: 384 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALR 560
Score = 40.5 bits (82), Expect(3) = 1e-063
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / -3
Query: 345 VSMDESFGLTLRRKEKLLLVPR 280
+ M E FGLT+RRKEKLLLVP+
Sbjct: 181 IDMTEVFGLTVRRKEKLLLVPK 116
Score = 29.0 bits (57), Expect(3) = 2e-031
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2 / +3
Query: 785 VVLTSVCSFSMTCLLLMS 838
+ LTS CSFS+ C LLMS
Sbjct: 615 IPLTSSCSFSIMCGLLMS 668
Score = 25.4 bits (49), Expect(3) = 1e-063
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2 / -3
Query: 837 LINNRHVMEKLQTEVR 790
L+ H+MEKLQ EVR
Sbjct: 667 LMRRPHMMEKLQDEVR 620
Score = 23.5 bits (45), Expect(3) = 2e-031
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1 / +2
Query: 283 WNKEKLLLPAKRQPKGLVH 339
WN++ LLP PK L H
Sbjct: 119 WNQQ*FLLPTDG*PKHLCH 175
>gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24a03 3', mRNA sequence
Length = 645
Score = 218 bits (470), Expect(3) = 1e-063
Identities = 80/132 (60%), Positives = 105/132 (79%)
Frame = -2 / -2
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRLHP AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 572 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 393
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
GRD ++WE PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN G A +E+ML
Sbjct: 392 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 213
Query: 396 ANLMYHFDWEVP 361
ANL+ HFDWE+P
Sbjct: 212 ANLVCHFDWELP 177
Score = 122 bits (262), Expect(3) = 2e-031
Identities = 59/119 (49%), Positives = 70/119 (58%)
Frame = +2 / +1
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+SQSKW+ R A++ S A P+FIPG ILRP PNG N +S P S N SGMN
Sbjct: 178 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 357
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SSG+S + SLP A ALT TRVPAGT PS+ +SA+ S S M ALR
Sbjct: 358 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALR 534
Score = 40.5 bits (82), Expect(3) = 1e-063
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / -2
Query: 345 VSMDESFGLTLRRKEKLLLVPR 280
+ M E FGLT+RRKEKLLLVP+
Sbjct: 155 IDMTEVFGLTVRRKEKLLLVPK 90
Score = 29.0 bits (57), Expect(3) = 2e-031
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2 / +1
Query: 785 VVLTSVCSFSMTCLLLMSS 841
+ LTS CSF + C LLMSS
Sbjct: 589 IPLTSSCSFXIMCGLLMSS 645
Score = 24.9 bits (48), Expect(3) = 1e-063
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2 / -2
Query: 840 ELINNRHVMEKLQTEVR 790
EL+ H+M KLQ EVR
Sbjct: 644 ELMRRPHMMXKLQDEVR 594
Score = 23.5 bits (45), Expect(3) = 2e-031
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1 / +3
Query: 283 WNKEKLLLPAKRQPKGLVH 339
WN++ LLP PK L H
Sbjct: 93 WNQQ*FLLPTDG*PKHLCH 149
>gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3e02 3', mRNA sequence
Length = 597
Score = 218 bits (470), Expect(2) = 1e-061
Identities = 80/132 (60%), Positives = 105/132 (79%)
Frame = -2 / -3
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRLHP AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 592 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 413
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
GRD ++WE PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN G A +E+ML
Sbjct: 412 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 233
Query: 396 ANLMYHFDWEVP 361
ANL+ HFDWE+P
Sbjct: 232 ANLVCHFDWELP 197
Score = 122 bits (262), Expect(2) = 3e-028
Identities = 59/119 (49%), Positives = 70/119 (58%)
Frame = +2 / +3
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+SQSKW+ R A++ S A P+FIPG ILRP PNG N +S P S N SGMN
Sbjct: 198 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 377
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SSG+S + SLP A ALT TRVPAGT PS+ +SA+ S S M ALR
Sbjct: 378 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALR 554
Score = 40.5 bits (82), Expect(2) = 1e-061
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / -3
Query: 345 VSMDESFGLTLRRKEKLLLVPR 280
+ M E FGLT+RRKEKLLLVP+
Sbjct: 175 IDMTEVFGLTVRRKEKLLLVPK 110
Score = 23.5 bits (45), Expect(2) = 3e-028
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1 / +2
Query: 283 WNKEKLLLPAKRQPKGLVH 339
WN++ LLP PK L H
Sbjct: 113 WNQQ*FLLPTDG*PKHLCH 169
>gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0006N15f, mRNA sequence
Length = 710
Score = 200 bits (431), Expect(3) = 3e-061
Identities = 78/149 (52%), Positives = 105/149 (70%)
Frame = -2 / +2
Query: 807 LQTEVRTTMRSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEID 628
L T+++ +RS K M+ E+DL + YLKA IKETLRLH PAP L+PH + AD I+
Sbjct: 263 LMTKLQAEVRSSIPKGKHMVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVIN 442
Query: 627 GYFVPAGTRVLVNAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGR 448
GY +P+GTRV+VN+ A+ RD +WE EEF+PERF+Q A + KG ++PFG+GR
Sbjct: 443 GYTIPSGTRVIVNSRAIARDPNSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGR 622
Query: 447 RICPGMNFGFATMEIMLANLMYHFDWEVP 361
RICPG+N +EIML NL+YHFDW++P
Sbjct: 623 RICPGINLAIGAIEIMLTNLVYHFDWKLP 709
Score = 107 bits (228), Expect(2) = 2e-035
Identities = 55/120 (45%), Positives = 67/120 (55%)
Frame = +2 / -3
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+ QSKWY RL SMISM +FIPG ILRP PNG + P + A C RSG N
Sbjct: 708 GSFQSKWYTRLVSMISMAPMARFIPGHILRPVPNGR*RKPFPL*SMAAALPPCMKRSGRN 529
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR* 721
SS S ++ SL A+ LT TRVP G *P +++SA+ SVSL+ A R*
Sbjct: 528 SSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLITAFR* 349
Score = 63.4 bits (132), Expect(2) = 2e-035
Identities = 36/87 (41%), Positives = 49/87 (56%)
Frame = +2 / -3
Query: 782 IVVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPASNMSTKMALRLSVVRPYSCCMESRT 961
+++LTS CS M MS AM YS DVS+PA NM T AL S+VR YS +ES++
Sbjct: 300 MLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTCSLVRLYSF*IESKS 121
Query: 962 CMKSASLSSLSPEGLLCTCSWMSSSNT 1042
M S S + L C+ +SS ++
Sbjct: 120 WM*SVSSPNAGAGLLSCSWMRLSSKSS 40
Score = 45.5 bits (93), Expect(3) = 3e-061
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -1 / +1
Query: 967 HTRSALHTARVRPHYGQSQGHLGGHVRGRYRDILPDARVRHGRAHQQQARH 815
H R A + RV+PH G Q +G HV + I+ +RHG AH + H
Sbjct: 115 HPRLAFDSERVQPHKGAGQSSVGDHVWSWHGHIIHSDGIRHGSAHAKPRPH 267
Score = 29.9 bits (59), Expect(3) = 3e-061
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -2 / +2
Query: 1068 RRLNQRWNDVFDELIQEH 1015
RR+N+ W+D+ + LI EH
Sbjct: 20 RRVNKMWDDLLESLIHEH 73
>gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 3', mRNA sequence
Length = 746
Score = 208 bits (448), Expect(2) = 1e-059
Identities = 82/153 (53%), Positives = 111/153 (72%)
Frame = -2 / -1
Query: 807 LQTEVRTTMRSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEID 628
L T+++ +RS K M+ E+DL + YLKA IKETLRLH PAP L+PH + AD I+
Sbjct: 674 LMTKLQAEVRSSIPKGKHMVIEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVIN 495
Query: 627 GYFVPAGTRVLVNAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGR 448
GY +P+GTRV+VN+ A+ RD ++WE EEF+PERF+Q A + KG ++PFG+GR
Sbjct: 494 GYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGR 315
Query: 447 RICPGMNFGFATMEIMLANLMYHFDWEVPGSAA 349
RICPG+NF A +EIMLANL+YHFDW++P +A
Sbjct: 314 RICPGINFAIAAIEIMLANLVYHFDWKLPPGSA 216
Score = 114 bits (244), Expect(2) = 1e-029
Identities = 59/120 (49%), Positives = 69/120 (57%)
Frame = +2 / +1
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+ QSKWY RLASMISM A KFIPG ILRP PNG + P + A C RSG N
Sbjct: 229 GSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL*SMAAALPPCMKRSGRN 408
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR* 721
SS S ++ SL A+ LT TRVP G *P +++SA+ SVSLM A R*
Sbjct: 409 SSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR* 588
Score = 43.7 bits (89), Expect(2) = 1e-059
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -2 / -1
Query: 348 GVSMDESFGLTLRRKEKLLLVPRI 277
G+SM ESFGLT+ RK+KLLLVP +
Sbjct: 209 GISMTESFGLTVHRKDKLLLVPLV 138
Score = 36.3 bits (73), Expect(2) = 1e-029
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2 / +1
Query: 782 IVVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPA 886
+++LTS CS M MS AM YS DVS+PA
Sbjct: 637 MLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPA 741
>gb|BF261803.3|BF261803 HV_CEa0002E08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0002E08f, mRNA sequence
Length = 850
Score = 133 bits (284), Expect(5) = 4e-059
Identities = 53/84 (63%), Positives = 67/84 (79%)
Frame = -2 / +1
Query: 1563 LFVSSPSAADAVLRTQDHIFASRPPSMAAEIIRYGPSDVAFVPYGEYWRQGRKLLTTHML 1384
L VSSP AA+AVLRTQDH+FASRP + + + G +D+AFVPYGE+WRQ R+L+TTH+L
Sbjct: 13 LVVSSPRAAEAVLRTQDHVFASRPTNAVVDALLDGGADIAFVPYGEFWRQARRLVTTHLL 192
Query: 1383 STKKVQSFRHGRQEEVRLVMDKIR 1312
S +KV S R GR+EE RLVM KI+
Sbjct: 193 SARKVHSLRRGREEEARLVMAKIQ 264
Score = 110 bits (235), Expect(2) = 7e-035
Identities = 51/83 (61%), Positives = 57/83 (68%)
Frame = +2 / -3
Query: 1316 ILSMTSRTSSCRPWRKDCTFLVLSMCVVRSFLPCRQYSP*GTNATSEGP*RMISAAMDGG 1495
IL++T R SS RP R++CTFL LS CVV S L CRQ SP*GT A S P R S G
Sbjct: 260 ILAITRRASSSRPRRRECTFLALSRCVVTSLLACRQNSP*GTKAMSAPPSRRASTTAFVG 81
Query: 1496 RDAKMWSWVRRTASAALGEDTNR 1564
R+AK WS VRRTASAA GE+T R
Sbjct: 80 REAKTWSCVRRTASAARGEETTR 12
Score = 77.1 bits (162), Expect(5) = 4e-059
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -2 / +1
Query: 1281 VDLSDLLSGYTNDVVCRAVLGASHRNQGRNRLFSELTEINVSLLGGFNLEDYFP 1120
VD++ LL +TND+VCRAV G R +GRN LF E+ + NV+ GGFNL DY+P
Sbjct: 289 VDMTRLLGAFTNDIVCRAVSGKFFREEGRNELFREVIDGNVAAFGGFNLLDYYP 450
Score = 73.0 bits (153), Expect(2) = 2e-022
Identities = 33/64 (51%), Positives = 40/64 (62%)
Frame = +1 / -2
Query: 1315 DLVHDEPHLFLSAMAEGLHLLGAEHVRGEEFPALPPVLAVGHERDVRGPVADDLGGHGRR 1494
DL H + L+A AEG+HL GAE VRG++ P LPP LAVG E DV V + + RR
Sbjct: 261 DLGHHQARFLLAAAAEGVHLPGAEQVRGDQPPRLPPELAVGDEGDVSAAVEEGVDDRVRR 82
Query: 1495 PRRE 1506
PR E
Sbjct: 81 PRGE 70
Score = 58.3 bits (121), Expect(2) = 7e-035
Identities = 30/54 (55%), Positives = 34/54 (62%)
Frame = +2 / -3
Query: 1121 GK*SSRLNPPRRDTLISVSSLNSLFRPWFRCDAPSTARHTTSLVYPDRRSLRST 1282
G *SSRLNPP T S++SLNS FRP R + P TARHT SLV + ST
Sbjct: 449 G**SSRLNPPNAATFPSMTSLNSSFRPSSRKNFPDTARHTMSLVKAPSSLVMST 288
Score = 53.8 bits (111), Expect(2) = 2e-022
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +1 / -2
Query: 1126 VVLEVEPAEEGHVDLCQLAEQPVPPLVPVRRAKHRAAHHVVGVPGQEIAQVH 1281
VV +VEPA+ GHV + L EQ VP +P H AAH+VVG ++ VH
Sbjct: 444 VVQQVEPAKRGHVPVDDLPEQLVPAFLPEELPGHGAAHYVVGEGAEQPRHVH 289
Score = 44.1 bits (90), Expect(5) = 4e-059
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -2 / +1
Query: 1119 PNMAMADVLLRLVSVMFRRLNQRWNDVFDELIQEHVQSRPSGESEESEAD 970
P +A +L RLV RL ++W+D+ D++I +HV + S + + D
Sbjct: 448 PGLAKVSMLRRLVFAKTNRLKRKWDDLLDKIIVDHVSQKASPREQHRDRD 597
Score = 27.6 bits (54), Expect(5) = 4e-059
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1 / +2
Query: 913 QGHLGGHVRGRYRDILPDARVRHGRAHQQ 827
+G + G GR+R+ + + VRHG AH +
Sbjct: 683 KGPIDGTCFGRHRNFIHSS*VRHG*AHAE 769
Score = 22.6 bits (43), Expect(5) = 4e-059
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2 / +2
Query: 954 LSIQQEYGLTTDNLK 910
L +Q+EY LTT++ K
Sbjct: 641 LGLQEEYILTTEHFK 685
>gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019N18f, mRNA sequence
Length = 925
Score = 91.3 bits (193), Expect(6) = 7e-059
Identities = 38/72 (52%), Positives = 51/72 (70%)
Frame = -2 / +3
Query: 807 LQTEVRTTMRSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEID 628
L T+++ +RS K M+ E+DL + YLKA IKETLRLH PAP L+PH + AD I+
Sbjct: 459 LMTKLQAEVRSSIPKGKHMVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVIN 638
Query: 627 GYFVPAGTRVLV 592
GY +P+GTRV+V
Sbjct: 639 GYTIPSGTRVIV 674
Score = 68.0 bits (142), Expect(6) = 7e-059
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = -2 / +3
Query: 1281 VDLSDLLSGYTNDVVCRAVLGASHRNQGRNRLFSELTEINVSLLGGFNLEDYFP 1120
+DL +LLS ++ ++V AV G S R +G +LF EL E N L+GGFN+ DYFP
Sbjct: 6 LDLGELLSAFSTNIVGHAVCGKSFRQKGHEKLFRELVETNSLLIGGFNVGDYFP 167
Score = 63.4 bits (132), Expect(4) = 2e-026
Identities = 36/87 (41%), Positives = 49/87 (56%)
Frame = +2 / -1
Query: 782 IVVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPASNMSTKMALRLSVVRPYSCCMESRT 961
+++LTS CS M MS AM YS DVS+PA NM T AL S+VR YS +ES++
Sbjct: 496 MLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTCSLVRLYSF*IESKS 317
Query: 962 CMKSASLSSLSPEGLLCTCSWMSSSNT 1042
M S S + L C+ +SS ++
Sbjct: 316 WM*SVSSPNAGAGLLSCSWMRLSSKSS 236
Score = 51.0 bits (105), Expect(6) = 7e-059
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -2 / +3
Query: 471 FIPFGSGRRICPGMNFGFATMEIMLANLMYHFDWE 367
++PFG+GRR CPG+N A + IML NL Y F E
Sbjct: 798 YLPFGTGRRYCPGINLRIAAIGIMLTNLGYQFPLE 902
Score = 45.5 bits (93), Expect(6) = 7e-059
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -1 / +2
Query: 967 HTRSALHTARVRPHYGQSQGHLGGHVRGRYRDILPDARVRHGRAHQQQARH 815
H R A + RV+PH G Q +G HV + I+ +RHG AH + H
Sbjct: 311 HPRLAFDSERVQPHKGAGQSSVGDHVWSWHGHIIHSDGIRHGSAHAKPRPH 463
Score = 45.5 bits (93), Expect(4) = 2e-026
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = +2 / -1
Query: 368 SQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFM 493
S W RL SMI M A +FIPGQ LRP P G +P +
Sbjct: 901 SSGNW*PRLVSMIPMAAMRRFIPGQYLRPVPKGR*KEXVPLI 776
Score = 35.4 bits (71), Expect(4) = 2e-026
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +2 / -1
Query: 1121 GK*SSRLNPPRRDTLISVSSLNSLFRPWFRCDAPSTA 1231
GK*S L PP L+S SSL S P+ D P TA
Sbjct: 166 GK*SPTLKPPMSKELVSTSSLKSFSWPFCLKDLPHTA 56
Score = 35.0 bits (70), Expect(6) = 7e-059
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -2 / +3
Query: 1119 PNMAMADVLLRLVSVMFRRLNQRWNDVFDELIQEH 1015
P + D++ +V RR+N+ W+D+ + LI EH
Sbjct: 165 PELLKLDIIRWMVCGRARRVNKMWDDLLESLIHEH 269
Score = 31.3 bits (62), Expect(4) = 2e-026
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2 / -1
Query: 590 LTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR* 721
LT TRVP G *P +++SA+ SVSL+ A R*
Sbjct: 676 LTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLITAFR* 545
Score = 30.4 bits (60), Expect(6) = 7e-059
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2 / +2
Query: 558 WEKPEEFMPERFVQEPGAVDVHMKG 484
WE EE +PERF+Q A + KG
Sbjct: 710 WESAEEVLPERFMQGGMAAAMDYKG 784
>gb|BG301073.1|BG301073 HVSMEb0019H09f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0019H09f, mRNA sequence
Length = 578
Score = 186 bits (401), Expect(2) = 8e-059
Identities = 72/122 (59%), Positives = 95/122 (77%)
Frame = -2 / +3
Query: 1677 IIGHLHLIGAETHISIRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFAS 1498
+IGHLH +G H+S+R L A+HGR+GL+L+R+GAVPTL VS+P+AA AVLRT DH+FA
Sbjct: 42 VIGHLHQVGPLPHVSLRHLAAEHGRDGLMLVRLGAVPTLVVSTPAAAQAVLRTHDHVFAX 221
Query: 1497 RPPSMAAEIIRYGPSDVAFVPYGEYWRQGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDK 1318
RP S A I+ YG +DV F PYG +WRQ +K+ TTH+L+ +KV S+RH RQ EV LV+ K
Sbjct: 222 RPHSPVAHILFYGSADVVFAPYGHHWRQVKKISTTHLLTARKVHSYRHARQHEVNLVLAK 401
Query: 1317 IR 1312
+R
Sbjct: 402 VR 407
Score = 114 bits (243), Expect = 2e-024
Identities = 58/121 (47%), Positives = 68/121 (56%)
Frame = +2 / -2
Query: 1313 RILSMTSRTSSCRPWRKDCTFLVLSMCVVRSFLPCRQYSP*GTNATSEGP*RMISAAMDG 1492
R L+ T TS R WR + TFL +S VV FL RQ+ P*G TS P*+ + A +
Sbjct: 406 RTLARTRFTSCWRAWR*EWTFLAVSRWVVEIFLTWRQWWP*GAKTTSAEP*KRMWATGEW 227
Query: 1493 GRDAKMWSWVRRTASAALGEDTNRVGTAPMRRSSRPLRPCLASRSRIEMWVSAPMRWRWP 1672
G A WS VR TA AA G +T VGTAP R S RP RPC A+R R E P RWP
Sbjct: 226 GLXANTWSCVRSTACAAAGVETTSVGTAPRRTSMRPSRPCSAARWRRETCGRGPTWCRWP 47
Query: 1673 M 1675
+
Sbjct: 46 I 44
Score = 62.5 bits (130), Expect(2) = 8e-059
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = -2 / +3
Query: 1281 VDLSDLLSGYTNDVVCRAVLGASHRNQGRNRLFSELTEINVSLLGGFNL 1135
+D+S+LL+ + D+VC A G S R +G N+ F EL E N SL+GGFNL
Sbjct: 432 LDMSELLNAFVFDIVCHAGAGNSFRERGLNKHFRELVEANASLIGGFNL 578
>gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38d04 3', mRNA sequence
Length = 552
Score = 207 bits (446), Expect(2) = 2e-058
Identities = 77/123 (62%), Positives = 96/123 (78%)
Frame = -2 / -1
Query: 729 SMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWALGRDRTTWEK 550
+M YL+ IKE+LRLHP AP L PH AD IDGY VPAGTRV+VNAWA+GRD ++WE
Sbjct: 549 NMXYLRXVIKESLRLHPVAPLLAPHLXMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWEY 370
Query: 549 PEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIMLANLMYHFDW 370
PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN G A +E+MLANL+ HFDW
Sbjct: 369 PEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDW 190
Query: 369 EVP 361
E+P
Sbjct: 189 ELP 181
Score = 121 bits (258), Expect(2) = 1e-027
Identities = 58/119 (48%), Positives = 69/119 (57%)
Frame = +2 / +2
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+SQSKW+ R A++ S A P+FIPG ILRP PNG N +S P S N SGMN
Sbjct: 182 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 361
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SSG+S + SLP A ALT TRVPAGT PS+ +SA+ S S M LR
Sbjct: 362 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMXRCGARRGATGCSRSDSFMTXLR 538
Score = 40.5 bits (82), Expect(2) = 2e-058
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / -1
Query: 345 VSMDESFGLTLRRKEKLLLVPR 280
+ M E FGLT+RRKEKLLLVP+
Sbjct: 159 IDMTEVFGLTVRRKEKLLLVPK 94
Score = 23.5 bits (45), Expect(2) = 1e-027
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1 / +1
Query: 283 WNKEKLLLPAKRQPKGLVH 339
WN++ LLP PK L H
Sbjct: 97 WNQQ*FLLPTDG*PKHLCH 153
>gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42e08 3', mRNA sequence
Length = 594
Score = 214 bits (462), Expect(2) = 3e-058
Identities = 79/132 (59%), Positives = 104/132 (78%)
Frame = -2 / -1
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRL P AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 519 EIISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 340
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
GRD ++WE PEEF+PERF E + ++ KG D +F+PFG+GRR+CPGMN G A +E+ML
Sbjct: 339 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 160
Query: 396 ANLMYHFDWEVP 361
ANL+ HFDWE+P
Sbjct: 159 ANLVCHFDWELP 124
Score = 123 bits (263), Expect = 4e-027
Identities = 59/119 (49%), Positives = 70/119 (58%)
Frame = +2 / +2
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+SQSKW+ R A++ S A P+FIPG ILRP PNG N +S P S N SGMN
Sbjct: 125 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 304
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SSG+S + SLP A ALT TRVPAGT PS+ +SA+ S S M ALR
Sbjct: 305 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALR 481
Score = 32.7 bits (65), Expect(2) = 3e-058
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -1
Query: 345 VSMDESFGLTLRRKEKLL 292
+ M E FGLT+RRKEKLL
Sbjct: 102 IDMTEVFGLTVRRKEKLL 49
>gb|BE420993.1|BE420993 HWM004.F10 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.F10, mRNA sequence
Length = 1299
Score = 147 bits (315), Expect(4) = 4e-058
Identities = 60/91 (65%), Positives = 74/91 (81%)
Frame = -2 / +2
Query: 1584 RIGAVPTLFVSSPSAADAVLRTQDHIFASRPPSMAAEIIRYGPSDVAFVPYGEYWRQGRK 1405
R A+ TL VSSPSA AVLRT DH+FASRP S+ +EI+ YGPSDVAF PYGE+WRQ RK
Sbjct: 86 RNSALATLVVSSPSAGQAVLRTHDHVFASRPYSLVSEILFYGPSDVAFSPYGEHWRQVRK 265
Query: 1404 LLTTHMLSTKKVQSFRHGRQEEVRLVMDKIR 1312
+ TTH+L+ KKV+S+RH R+ +VRLV+ KIR
Sbjct: 266 IATTHLLTNKKVRSYRHAREHDVRLVVAKIR 358
Score = 111 bits (236), Expect(3) = 1e-035
Identities = 51/88 (57%), Positives = 60/88 (68%)
Frame = +2 / -1
Query: 1313 RILSMTSRTSSCRPWRKDCTFLVLSMCVVRSFLPCRQYSP*GTNATSEGP*RMISAAMDG 1492
RIL+ T+ TS R WR + TFL++ CVV FL CRQ SP*G ATSEGP*+ IS +
Sbjct: 357 RILATTNLTSCSRAWR*ERTFLLVRRCVVAIFLTCRQCSP*GLKATSEGP*KRISLTRE* 178
Query: 1493 GRDAKMWSWVRRTASAALGEDTNRVGTA 1576
GRDAK WS VR TA ALG+DT V +A
Sbjct: 177 GRDAKTWSCVRSTACPALGDDTTSVASA 94
Score = 76.2 bits (160), Expect(4) = 4e-058
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = -2 / +2
Query: 1281 VDLSDLLSGYTNDVVCRAVLGASHRNQGRNRLFSELTEINVSLLGGFNLEDYFP 1120
+D+S+LL+ +TND+VC AV G +G N+L EL E N LLGGFNL DYFP
Sbjct: 383 IDMSELLNAFTNDIVCHAVSGKLFTERGHNKLCRELVEANSLLLGGFNLVDYFP 544
Score = 51.9 bits (107), Expect(3) = 1e-035
Identities = 29/53 (54%), Positives = 31/53 (58%)
Frame = +2 / -1
Query: 1121 GK*SSRLNPPRRDTLISVSSLNSLFRPWFRCDAPSTARHTTSLVYPDRRSLRS 1279
GK*S+RLNPPR + L S SS SL P P TA HT SLV R SL S
Sbjct: 543 GK*STRLNPPRSNELASTSSRQSLLCPRSVKSLPDTA*HTMSLVKALRSSLMS 385
Score = 32.2 bits (64), Expect(4) = 4e-058
Identities = 8/37 (21%), Positives = 22/37 (59%)
Frame = -2 / +2
Query: 1119 PNMAMADVLLRLVSVMFRRLNQRWNDVFDELIQEHVQ 1009
P + D+++R+ ++N+ W+++ + +I EH +
Sbjct: 542 PRLVQMDIIMRMGCAKAXKVNKMWDNLLNSIIDEHAR 652
Score = 27.6 bits (54), Expect(4) = 4e-058
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2 / +2
Query: 993 ESEESEADFIHVLLSIQQEY 934
E + DFI V+LSIQ EY
Sbjct: 665 EHNNEDNDFIEVVLSIQHEY 724
Score = 26.3 bits (51), Expect(3) = 1e-035
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2 / -1
Query: 935 YSCCMESRTCMKSASLSSLSPEGLLCTCSWMSSSNTSFHLW 1057
YSC +ES T MKS S S L S + S S L+
Sbjct: 723 YSCWIESTTSMKSLSSLLCSGTDFLACSSMILLSRLSHILF 601
>gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34j09 3', mRNA sequence
Length = 719
Score = 204 bits (439), Expect(2) = 5e-058
Identities = 76/150 (50%), Positives = 106/150 (70%)
Frame = -2 / -3
Query: 810 KLQTEVRTTMRSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEI 631
++ ++ +RS K D + ++DL +PYLKA IKETLRLH P P ++PH S + I
Sbjct: 627 RVMAMLQAEVRSTIPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECII 448
Query: 630 DGYFVPAGTRVLVNAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSG 451
+GY +P+GTR +N +A+ RD + WE PEEFMPERF++ A + KG D ++ PFGSG
Sbjct: 447 NGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSG 268
Query: 450 RRICPGMNFGFATMEIMLANLMYHFDWEVP 361
RRICPG+NF AT+++ML NLMYHFDW++P
Sbjct: 267 RRICPGINFATATIQLMLTNLMYHFDWKLP 178
Score = 107 bits (229), Expect(2) = 5e-031
Identities = 58/129 (44%), Positives = 71/129 (55%)
Frame = +2 / +2
Query: 338 MDTPAAEPGTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGS 517
M + + G+ QSKWYMR SM MVA K IPG ILRP+PNG +S P + A
Sbjct: 155 MPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPP 334
Query: 518 CTNRSGMNSSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSV 697
NRSGMNSSG S ++ SL A L + RVP G *P + S++E SV
Sbjct: 335 SMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSV 514
Query: 698 SLMVALR*G 724
SL+ A R*G
Sbjct: 515 SLITAFR*G 541
Score = 48.3 bits (99), Expect(2) = 5e-031
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +2 / +2
Query: 782 IVVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPASNMSTKMAL 913
+V+LTS CS +MT +S M YSS DVS+PASNM + AL
Sbjct: 587 MVLLTSACSMAMTRGFCISRTMAYSSTMVDVSVPASNMISN*AL 718
Score = 42.3 bits (86), Expect(2) = 5e-058
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -2 / -3
Query: 348 GVSMDESFGLTLRRKEKLLLVPRI 277
G++M E+FGLT+ RKEKLLLVP +
Sbjct: 159 GINMTETFGLTVHRKEKLLLVPLV 88
>gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 3', mRNA sequence
Length = 703
Score = 204 bits (439), Expect(2) = 5e-058
Identities = 76/150 (50%), Positives = 106/150 (70%)
Frame = -2 / -2
Query: 810 KLQTEVRTTMRSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEI 631
++ ++ +RS K D + ++DL +PYLKA IKETLRLH P P ++PH S + I
Sbjct: 645 RVMAMLQAEVRSTIPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECII 466
Query: 630 DGYFVPAGTRVLVNAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSG 451
+GY +P+GTR +N +A+ RD + WE PEEFMPERF++ A + KG D ++ PFGSG
Sbjct: 465 NGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSG 286
Query: 450 RRICPGMNFGFATMEIMLANLMYHFDWEVP 361
RRICPG+NF AT+++ML NLMYHFDW++P
Sbjct: 285 RRICPGINFATATIQLMLTNLMYHFDWKLP 196
Score = 107 bits (229), Expect(2) = 4e-027
Identities = 58/129 (44%), Positives = 71/129 (55%)
Frame = +2 / +2
Query: 338 MDTPAAEPGTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGS 517
M + + G+ QSKWYMR SM MVA K IPG ILRP+PNG +S P + A
Sbjct: 173 MPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPP 352
Query: 518 CTNRSGMNSSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSV 697
NRSGMNSSG S ++ SL A L + RVP G *P + S++E SV
Sbjct: 353 SMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSV 532
Query: 698 SLMVALR*G 724
SL+ A R*G
Sbjct: 533 SLITAFR*G 559
Score = 42.3 bits (86), Expect(2) = 5e-058
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -2 / -2
Query: 348 GVSMDESFGLTLRRKEKLLLVPRI 277
G++M E+FGLT+ RKEKLLLVP +
Sbjct: 177 GINMTETFGLTVHRKEKLLLVPLV 106
Score = 35.0 bits (70), Expect(2) = 4e-027
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2 / +2
Query: 782 IVVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSI 880
+V+LTS CS +MT +S M YSS DVS+
Sbjct: 605 MVLLTSACSMAMTRGFCISRTMAYSSTMVDVSV 703
>gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m23 5', mRNA sequence
Length = 660
Score = 204 bits (439), Expect(2) = 5e-058
Identities = 76/150 (50%), Positives = 106/150 (70%)
Frame = -2 / +2
Query: 810 KLQTEVRTTMRSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEI 631
++ ++ +RS K D + ++DL +PYLKA IKETLRLH P P ++PH S + I
Sbjct: 74 RVMAMLQAEVRSTIPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECII 253
Query: 630 DGYFVPAGTRVLVNAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSG 451
+GY +P+GTR +N +A+ RD + WE PEEFMPERF++ A + KG D ++ PFGSG
Sbjct: 254 NGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSG 433
Query: 450 RRICPGMNFGFATMEIMLANLMYHFDWEVP 361
RRICPG+NF AT+++ML NLMYHFDW++P
Sbjct: 434 RRICPGINFATATIQLMLTNLMYHFDWKLP 523
Score = 107 bits (229), Expect(2) = 2e-027
Identities = 58/129 (44%), Positives = 71/129 (55%)
Frame = +2 / -1
Query: 338 MDTPAAEPGTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGS 517
M + + G+ QSKWYMR SM MVA K IPG ILRP+PNG +S P + A
Sbjct: 546 MPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPP 367
Query: 518 CTNRSGMNSSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSV 697
NRSGMNSSG S ++ SL A L + RVP G *P + S++E SV
Sbjct: 366 SMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSV 187
Query: 698 SLMVALR*G 724
SL+ A R*G
Sbjct: 186 SLITAFR*G 160
Score = 42.3 bits (86), Expect(2) = 5e-058
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -2 / +2
Query: 348 GVSMDESFGLTLRRKEKLLLVPRI 277
G++M E+FGLT+ RKEKLLLVP +
Sbjct: 542 GINMTETFGLTVHRKEKLLLVPLV 613
Score = 36.3 bits (73), Expect(2) = 2e-027
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2 / -1
Query: 782 IVVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPAS 889
+V+LTS CS +MT +S M YSS R +PAS
Sbjct: 114 MVLLTSACSMAMTRGFCISRTMAYSSTRXMCXVPAS 7
>gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20j07 3', mRNA sequence
Length = 660
Score = 204 bits (439), Expect(2) = 5e-058
Identities = 76/150 (50%), Positives = 106/150 (70%)
Frame = -2 / -3
Query: 810 KLQTEVRTTMRSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEI 631
++ ++ +RS K D + ++DL +PYLKA IKETLRLH P P ++PH S + I
Sbjct: 628 RVMAMLQAEVRSTIPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECII 449
Query: 630 DGYFVPAGTRVLVNAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSG 451
+GY +P+GTR +N +A+ RD + WE PEEFMPERF++ A + KG D ++ PFGSG
Sbjct: 448 NGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSG 269
Query: 450 RRICPGMNFGFATMEIMLANLMYHFDWEVP 361
RRICPG+NF AT+++ML NLMYHFDW++P
Sbjct: 268 RRICPGINFATATIQLMLTNLMYHFDWKLP 179
Score = 107 bits (229), Expect(2) = 2e-024
Identities = 58/129 (44%), Positives = 71/129 (55%)
Frame = +2 / +3
Query: 338 MDTPAAEPGTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGS 517
M + + G+ QSKWYMR SM MVA K IPG ILRP+PNG +S P + A
Sbjct: 156 MPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPP 335
Query: 518 CTNRSGMNSSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSV 697
NRSGMNSSG S ++ SL A L + RVP G *P + S++E SV
Sbjct: 336 SMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSV 515
Query: 698 SLMVALR*G 724
SL+ A R*G
Sbjct: 516 SLITAFR*G 542
Score = 42.3 bits (86), Expect(2) = 5e-058
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -2 / -3
Query: 348 GVSMDESFGLTLRRKEKLLLVPRI 277
G++M E+FGLT+ RKEKLLLVP +
Sbjct: 160 GINMTETFGLTVHRKEKLLLVPLV 89
Score = 25.8 bits (50), Expect(2) = 2e-024
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2 / +3
Query: 782 IVVLTSVCSFSMTCLLLMSSAMPY 853
+V+LTS CS +MT +S M Y
Sbjct: 588 MVLLTSACSMAMTRGFCISRTMAY 659
>gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 3', mRNA sequence
Length = 655
Score = 203 bits (438), Expect(2) = 7e-058
Identities = 76/145 (52%), Positives = 104/145 (71%)
Frame = -2 / -2
Query: 795 VRTTMRSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFV 616
++ +RS K D + ++DL +PYLKA IKETLRLH P P ++PH S + I+GY +
Sbjct: 648 LQAEVRSTIPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTI 469
Query: 615 PAGTRVLVNAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICP 436
P+GTR +N +A+ RD + WE PEEFMPERF++ A + KG D ++ PFGSGRRICP
Sbjct: 468 PSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICP 289
Query: 435 GMNFGFATMEIMLANLMYHFDWEVP 361
G+NF AT+++ML NLMYHFDW++P
Sbjct: 288 GINFATATIQLMLTNLMYHFDWKLP 214
Score = 107 bits (229), Expect = 2e-022
Identities = 58/129 (44%), Positives = 71/129 (55%)
Frame = +2 / +2
Query: 338 MDTPAAEPGTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGS 517
M + + G+ QSKWYMR SM MVA K IPG ILRP+PNG +S P + A
Sbjct: 191 MPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPP 370
Query: 518 CTNRSGMNSSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSV 697
NRSGMNSSG S ++ SL A L + RVP G *P + S++E SV
Sbjct: 371 SMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSV 550
Query: 698 SLMVALR*G 724
SL+ A R*G
Sbjct: 551 SLITAFR*G 577
Score = 42.3 bits (86), Expect(2) = 7e-058
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -2 / -2
Query: 348 GVSMDESFGLTLRRKEKLLLVPRI 277
G++M E+FGLT+ RKEKLLLVP +
Sbjct: 195 GINMTETFGLTVHRKEKLLLVPLV 124
>gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b09 3', mRNA sequence
Length = 618
Score = 200 bits (432), Expect(2) = 5e-057
Identities = 73/132 (55%), Positives = 98/132 (74%)
Frame = -2 / -3
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
D + ++DL +PYLKA IKETLRLH P P ++PH S + I+GY +P+GTR +N +A+
Sbjct: 610 DTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAI 431
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIML 397
RD + WE PEEFMPERF++ A + KG D ++ PFGSGRRICPG+NF AT+++ML
Sbjct: 430 QRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQLML 251
Query: 396 ANLMYHFDWEVP 361
NLMYHFDW++P
Sbjct: 250 TNLMYHFDWKLP 215
Score = 107 bits (229), Expect = 2e-022
Identities = 58/129 (44%), Positives = 71/129 (55%)
Frame = +2 / +3
Query: 338 MDTPAAEPGTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGS 517
M + + G+ QSKWYMR SM MVA K IPG ILRP+PNG +S P + A
Sbjct: 192 MPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPP 371
Query: 518 CTNRSGMNSSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSV 697
NRSGMNSSG S ++ SL A L + RVP G *P + S++E SV
Sbjct: 372 SMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSV 551
Query: 698 SLMVALR*G 724
SL+ A R*G
Sbjct: 552 SLITAFR*G 578
Score = 42.3 bits (86), Expect(2) = 5e-057
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -2 / -3
Query: 348 GVSMDESFGLTLRRKEKLLLVPRI 277
G++M E+FGLT+ RKEKLLLVP +
Sbjct: 196 GINMTETFGLTVHRKEKLLLVPLV 125
>gb|BQ471556.1|BQ471556 HV02M13r HV Hordeum vulgare subsp. vulgare cDNA clone HV02M13
5-PRIME, mRNA sequence
Length = 652
Score = 118 bits (252), Expect(3) = 5e-057
Identities = 46/77 (59%), Positives = 58/77 (75%)
Frame = -2 / +2
Query: 1542 AADAVLRTQDHIFASRPPSMAAEIIRYGPSDVAFVPYGEYWRQGRKLLTTHMLSTKKVQS 1363
AA AVLRT DH+FASRP S A I+ YG +DV F PYG +WRQ +K+ TTH+L+ +KV S
Sbjct: 11 AAQAVLRTHDHVFASRPHSPVAHILFYGSADVVFAPYGHHWRQVKKISTTHLLTARKVHS 190
Query: 1362 FRHGRQEEVRLVMDKIR 1312
+RH RQ EV LV+ K+R
Sbjct: 191 YRHARQHEVNLVLAKVR 241
Score = 77.6 bits (163), Expect(3) = 5e-057
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = -2 / +2
Query: 1281 VDLSDLLSGYTNDVVCRAVLGASHRNQGRNRLFSELTEINVSLLGGFNLEDYFP 1120
+D+S+LL+ + D+VC AV G S R +G N+ F EL E N SL+GGFNLED+FP
Sbjct: 266 LDMSELLNAFVFDIVCHAVAGNSFRERGLNKHFRELVEANASLIGGFNLEDHFP 427
Score = 72.5 bits (152), Expect(3) = 2e-023
Identities = 38/78 (48%), Positives = 45/78 (57%)
Frame = +2 / -2
Query: 1313 RILSMTSRTSSCRPWRKDCTFLVLSMCVVRSFLPCRQYSP*GTNATSEGP*RMISAAMDG 1492
R L+ T TS R WR + TFL +S VV FL RQ+ P*G TS P*+ + A +
Sbjct: 240 RTLARTRFTSCWRAWR*EWTFLAVSRWVVEIFLTWRQWWP*GAKTTSAEP*KRMWATGEW 61
Query: 1493 GRDAKMWSWVRRTASAAL 1546
G DA WS VR TA AAL
Sbjct: 60 GLDANTWSCVRSTACAAL 7
Score = 65.7 bits (137), Expect(3) = 5e-057
Identities = 27/59 (45%), Positives = 41/59 (69%)
Frame = -2 / +2
Query: 1056 QRWNDVFDELIQEHVQSRPSGESEESEADFIHVLLSIQQEYGLTTDNLKAILVDMFEAG 880
+R N+ +D+L+ + + + + + DFIHVLLS+QQEY LT D++KA L+ MFEAG
Sbjct: 476 RRVNNKWDDLLDRLIDEHATPPALDEDRDFIHVLLSVQQEYNLTRDHIKAQLLIMFEAG 652
Score = 41.4 bits (84), Expect(3) = 2e-023
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +2 / -2
Query: 881 PASNMSTKMALRLSVVRPYSCCMESRTCMKSASLSS 988
PASNM + AL S+VR YSC ES+T MKS S S+
Sbjct: 651 PASNMISN*ALIWSLVRLYSC*TESKTWMKSLSSSN 544
Score = 40.0 bits (81), Expect(3) = 2e-023
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = +2 / -2
Query: 1121 GK*SSRLNPPRRDTLISVSSLNSLFRPWFRCDAPSTARHTTS 1246
GK SSRL PP + L S SS L P + P+TA HT S
Sbjct: 426 GKWSSRLKPPMSEALASTSSRKCLLSPRSLKELPATAWHTMS 301
>gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40p23 5', mRNA sequence
Length = 502
Score = 202 bits (436), Expect(2) = 1e-055
Identities = 77/141 (54%), Positives = 103/141 (73%)
Frame = -2 / +1
Query: 783 MRSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGT 604
+RS K +M+ E DL S+ YLKA IKETLRLH P P L+PH S A+ ++GY +P+G
Sbjct: 1 VRSTITKGKEMVTEADLDSLAYLKAXIKETLRLHMPGPLLVPHLSMAECNVNGYIIPSGI 180
Query: 603 RVLVNAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNF 424
RV++N+WAL RD +WE EFMPER ++ A + KG D ++PFG+GRRICPG+NF
Sbjct: 181 RVIINSWALARDPGSWEHAXEFMPERXMECGSAATMDYKGNDFSYLPFGTGRRICPGINF 360
Query: 423 GFATMEIMLANLMYHFDWEVP 361
AT+EIMLANL+YHF+W++P
Sbjct: 361 AIATIEIMLANLIYHFNWKLP 423
Score = 35.9 bits (72), Expect(2) = 1e-055
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -2 / +1
Query: 348 GVSMDESFGLTLRRKEKLLL 289
G+SM E FG+T+ RKEKLLL
Sbjct: 442 GISMTELFGMTVHRKEKLLL 501
>gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak43p03 5', mRNA sequence
Length = 589
Score = 208 bits (449), Expect(2) = 3e-055
Identities = 79/149 (53%), Positives = 108/149 (72%)
Frame = -2 / +2
Query: 807 LQTEVRTTMRSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEID 628
L +++ +RS K +M+ E DL S YLKA IKETLRLH P P L+PH S A+ ++
Sbjct: 20 LMNKLQAEVRSTITKGKEMVTEADLDSXAYLKAVIKETLRLHMPGPLLVPHLSMAECNVN 199
Query: 627 GYFVPAGTRVLVNAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGR 448
GY +P+G RV++N+WAL RD +WE +EFMPERF++ A + KG D ++PFG+GR
Sbjct: 200 GYIIPSGIRVIINSWALARDPGSWEHADEFMPERFMECGSAATMDYKGNDFSYLPFGTGR 379
Query: 447 RICPGMNFGFATMEIMLANLMYHFDWEVP 361
RICPG+NF AT+EIMLANL+YHF+W++P
Sbjct: 380 RICPGINFAIATIEIMLANLIYHFNWKLP 466
Score = 109 bits (233), Expect = 5e-023
Identities = 60/125 (48%), Positives = 66/125 (52%)
Frame = +2 / -2
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+ Q KWYMR ASMISMVA K IPGQILRP PNG +S P A NRSGMN
Sbjct: 465 GSFQLKWYMRFASMISMVAIAKLIPGQILRPVPNGKYEKSFPL*SIVAALPHSINRSGMN 286
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR* 721
SS S + SL AQ L TR+P G P SA+E SVSL+ A R
Sbjct: 285 SSACSQLPGSLARAQLLMMTRIPDGIMYPFTLHSAMERWGTRSGPGIWSLSVSLITAFRY 106
Query: 722 GMLPR 736
L R
Sbjct: 105 AXLSR 91
Score = 28.6 bits (56), Expect(2) = 3e-055
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -2 / +3
Query: 327 FGLTLRRKEKLLLV 286
FG+T+ RKEKLLLV
Sbjct: 507 FGMTVHRKEKLLLV 548
>gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36o23 5', mRNA sequence
Length = 664
Score = 191 bits (412), Expect(2) = 1e-054
Identities = 73/126 (57%), Positives = 96/126 (76%)
Frame = -2 / +3
Query: 726 MPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWALGRDRTTWEKP 547
+ YLKA IKETLRLH PAP L+PH + AD I+GY +P+GTRV+VN+ A+ RD ++WE
Sbjct: 33 LAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESA 212
Query: 546 EEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIMLANLMYHFDWE 367
EEF+PERF+Q A + KG ++PFG+GRRICPG+NF A +EIMLANL+YHFDW+
Sbjct: 213 EEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWK 392
Query: 366 VPGSAA 349
+P +A
Sbjct: 393 LPPGSA 410
Score = 114 bits (244), Expect = 1e-024
Identities = 59/120 (49%), Positives = 69/120 (57%)
Frame = +2 / -1
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+ QSKWY RLASMISM A KFIPG ILRP PNG + P + A C RSG N
Sbjct: 397 GSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL*SMAAALPPCMKRSGRN 218
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR* 721
SS S ++ SL A+ LT TRVP G *P +++SA+ SVSLM A R*
Sbjct: 217 SSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR* 38
Score = 43.7 bits (89), Expect(2) = 1e-054
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -2 / +3
Query: 348 GVSMDESFGLTLRRKEKLLLVPRI 277
G+SM ESFGLT+ RK+KLLLVP +
Sbjct: 417 GISMTESFGLTVHRKDKLLLVPLV 488
>gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P450 monooxygenase
CYP71U4v2 mRNA, complete cds
Length = 1578
Score = 82.2 bits (173), Expect(6) = 1e-054
Identities = 33/94 (35%), Positives = 55/94 (58%)
Frame = -2 / +1
Query: 1596 LLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASRPPSMAAEIIRYGPSDVAFVPYGEYWR 1417
++LLR+G VP + VS+P AA VL+T D FA+R +++ + F PYGE+WR
Sbjct: 208 VMLLRLGEVPNVIVSTPEAAMLVLKTNDLTFATRTSGPTLDVVGSASEGIIFAPYGEHWR 387
Query: 1416 QGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDKI 1315
Q RK+ +LS +V+ + Q E+ +++ +
Sbjct: 388 QMRKVCVVELLSAMQVRRIQSIMQAEIAHLLESV 489
Score = 78.5 bits (165), Expect(6) = 1e-054
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = -2 / +1
Query: 507 AVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIMLANLMYHFDWEVPGSAAGVSMD 334
+V+ +G + F+PFG+GRR CPG F +E++LANL+YHFDW +PG + +MD
Sbjct: 1300 SVEYSSQGPHMEFVPFGAGRRQCPGALFATTMLELVLANLLYHFDWAIPGGESPETMD 1473
Score = 51.5 bits (106), Expect(6) = 1e-054
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = -2 / +1
Query: 936 YGLTTDNLKAILVDMFEAGIETSYLTLEYGMAELINNRHVMEKLQTEVRTTMR 778
+ LT++ + A++ D+F A +T+ TLE+ MAEL+ N M + + EVR +R
Sbjct: 886 FPLTSEIISAVIFDIFSAATDTTAATLEWAMAELVRNPRAMARAKLEVRQMLR 1044
Score = 41.8 bits (85), Expect(6) = 1e-054
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -2 / +1
Query: 678 PAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWALGRDRTTW 556
P+ L+ S + + GY +P GT V++NA+A+GRD W
Sbjct: 1132 PSAPLIHRASQENCRVMGYDIPKGTAVMINAFAVGRDPAHW 1254
Score = 40.9 bits (83), Expect(6) = 1e-054
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2 / +1
Query: 765 KKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFL 664
++ + DL + YL+ IKETLRLHP AP +
Sbjct: 1048 RRSSTITSADLAGLHYLRMVIKETLRLHPSAPLI 1149
Score = 27.6 bits (54), Expect(6) = 1e-054
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3 / +2
Query: 1259 PGTPTTWCAARCLARRTGTKGGTGCSAS*QRSTCPSSA 1146
PG PTT RC A G++ T S++* R + SA
Sbjct: 551 PG*PTTSSRGRCSAASLGSRRRTSGSST*WRFSGEGSA 664
>gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j16 3', mRNA sequence
Length = 644
Score = 181 bits (389), Expect(4) = 1e-054
Identities = 65/109 (59%), Positives = 83/109 (76%)
Frame = -2 / -3
Query: 687 LHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWALGRDRTTWEKPEEFMPERFVQEPG 508
L+P APFL PH + D I GY VPAGT +LVN WA+GRD +WE EE++PERF+ E
Sbjct: 489 LYPVAPFLPPHLAMGDCNIVGYMVPAGTHILVNVWAIGRDSNSWEDAEEYIPERFIDEGS 310
Query: 507 AVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIMLANLMYHFDWEVP 361
AV V+ KG D +F+PFG+GRR+CPG+N G +E+MLANL+YHFDWE+P
Sbjct: 309 AVHVNFKGNDFQFLPFGAGRRMCPGINLGITNVELMLANLIYHFDWELP 163
Score = 117 bits (250), Expect(2) = 3e-026
Identities = 55/103 (53%), Positives = 66/103 (64%)
Frame = +2 / +2
Query: 335 SMDTPAAEPGTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPG 514
SM + G+SQSKWYMR A++ S + P+FIPG ILRP PNG N +S P T TA
Sbjct: 137 SMSFLSTPTGSSQSKWYMRFANISSTLVIPRFIPGHILRPAPNGKN*KSFPLKLT*TALP 316
Query: 515 SCTNRSGMNSSGFSHVVRSLPSAQALTRTRVPAGTK*PSISES 643
S N SGM SS SH + SLP A LTR VPAGT *P++ +S
Sbjct: 317 SSMNLSGMYSSASSHELESLPMAHTLTRMCVPAGTM*PTMLQS 445
Score = 40.5 bits (82), Expect(4) = 1e-054
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2 / -3
Query: 345 VSMDESFGLTLRRKEKLLLVPR 280
+ M E FGLT+RRKEKLLLVP+
Sbjct: 141 IDMAEVFGLTMRRKEKLLLVPK 76
Score = 26.3 bits (51), Expect(2) = 3e-026
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 785 VVLTSVCSFSMTCLLLMSSA 844
++LTS CSF + LLMSSA
Sbjct: 573 ILLTSSCSFPIRDGLLMSSA 632
Score = 26.3 bits (51), Expect(4) = 1e-054
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2 / -2
Query: 855 EYGMAELINNRHVMEKLQTEVRT 787
E+ +AEL+ +M KLQ EVR+
Sbjct: 643 EFTLAELMRRPSLMGKLQDEVRS 575
Score = 23.5 bits (45), Expect(4) = 1e-054
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 726 MPYLKATIKETLRL 685
M YL+A IKE+LR+
Sbjct: 529 MVYLRAVIKESLRV 488
>gb|BF621561.1|BF621561 HVSMEa0011G21f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0011G21f, mRNA sequence
Length = 860
Score = 182 bits (391), Expect(2) = 2e-054
Identities = 70/122 (57%), Positives = 98/122 (80%)
Frame = -2 / +3
Query: 1677 IIGHLHLIGAETHISIRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFAS 1498
+IGHLH++G++ H+S+ DL AKH R+GL+LLR+G+VPTL V+S +AA AVLRT D +FAS
Sbjct: 168 VIGHLHMVGSQPHVSLGDLAAKHSRDGLMLLRLGSVPTLIVTSSNAARAVLRTHDDVFAS 347
Query: 1497 RPPSMAAEIIRYGPSDVAFVPYGEYWRQGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDK 1318
RP + A +II YGPSD+AF PYG++WRQ +K+ TH+L+ KV+S+R R+EE LV+ K
Sbjct: 348 RPHNPATDIIFYGPSDIAFCPYGDHWRQVKKIAMTHLLTANKVRSYRQAREEEACLVVAK 527
Query: 1317 IR 1312
+R
Sbjct: 528 LR 533
Score = 116 bits (247), Expect(2) = 2e-027
Identities = 60/121 (49%), Positives = 69/121 (57%)
Frame = +2 / -2
Query: 1313 RILSMTSRTSSCRPWRKDCTFLVLSMCVVRSFLPCRQYSP*GTNATSEGP*RMISAAMDG 1492
R L+ T SS R WR + T L + CV+ F C Q+SP*G A S GP* M+S A
Sbjct: 532 RSLATTRHASSSRAWR*ERTLLAVRRCVMAIFFTCLQWSP*GQKAMSLGP*NMMSVAGLW 353
Query: 1493 GRDAKMWSWVRRTASAALGEDTNRVGTAPMRRSSRPLRPCLASRSRIEMWVSAPMRWRWP 1672
GR+AK S VR TA AA E T VGT P RRS RP R CLA+RS E P RWP
Sbjct: 352 GREAKTSSCVRSTARAAFDEVTMSVGTEPRRRSMRPSRLCLAARSPRETCGWEPTMCRWP 173
Query: 1673 M 1675
+
Sbjct: 172 I 170
Score = 52.4 bits (108), Expect(2) = 2e-054
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = -2 / +3
Query: 1281 VDLSDLLSGYTNDVVCRAVLGASHRNQGRNRLFSELTEINVSLLGGF 1141
+DL +LLS + ++V AV G S R +G +LF EL E N L+GGF
Sbjct: 558 LDLGELLSAFYTNIVGHAVCGKSFRQKGHEKLFRELVETNSLLIGGF 698
Score = 27.6 bits (54), Expect(2) = 2e-027
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2 / -2
Query: 1139 LNPPRRDTLISVSSLNSLFRPWFRCDAPSTA 1231
+ PP L+S SSL S P+ D P TA
Sbjct: 700 VKPPMSKELVSTSSLKSFSWPFCLKDLPHTA 608
>emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for putative cytochrome P450
Length = 1790
Score = 82.2 bits (173), Expect(6) = 2e-054
Identities = 33/94 (35%), Positives = 55/94 (58%)
Frame = -2 / +2
Query: 1596 LLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASRPPSMAAEIIRYGPSDVAFVPYGEYWR 1417
++LLR+G VP + VS+P AA VL+T D FA+R +++ + F PYGE+WR
Sbjct: 272 VMLLRLGEVPNVIVSTPEAAVLVLKTNDLTFATRTSGPTLDVVGSASEGIIFAPYGEHWR 451
Query: 1416 QGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDKI 1315
Q RK+ +LS +V+ + Q E+ +++ +
Sbjct: 452 QMRKVCVVELLSAMQVRRIQSIMQAEIAHLLESV 553
Score = 78.5 bits (165), Expect(6) = 2e-054
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = -2 / +2
Query: 507 AVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIMLANLMYHFDWEVPGSAAGVSMD 334
+V+ +G + F+PFG+GRR CPG F +E++LANL+YHFDW +PG + +MD
Sbjct: 1364 SVEYSSQGPHMEFVPFGAGRRQCPGALFATTMLELVLANLLYHFDWAIPGGESPEAMD 1537
Score = 51.5 bits (106), Expect(6) = 2e-054
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = -2 / +2
Query: 936 YGLTTDNLKAILVDMFEAGIETSYLTLEYGMAELINNRHVMEKLQTEVRTTMR 778
+ LT++ + A++ D+F A +T+ TLE+ MAEL+ N M + + EVR +R
Sbjct: 950 FXLTSEIISAVIFDIFSAATDTTAATLEWAMAELVXNPQAMARAKLEVRQMLR 1108
Score = 41.8 bits (85), Expect(6) = 2e-054
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -2 / +2
Query: 678 PAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWALGRDRTTW 556
P+ L+ S + + GY +P GT V++NA+A+GRD W
Sbjct: 1196 PSAPLIHRASQENCRVMGYDIPKGTAVMINAFAVGRDPAHW 1318
Score = 40.9 bits (83), Expect(6) = 2e-054
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2 / +2
Query: 765 KKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFL 664
++ + DL + YL+ IKETLRLHP AP +
Sbjct: 1112 RRSSTITSADLAGLHYLRMVIKETLRLHPSAPLI 1213
Score = 27.6 bits (54), Expect(6) = 2e-054
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3 / +3
Query: 1259 PGTPTTWCAARCLARRTGTKGGTGCSAS*QRSTCPSSA 1146
PG PTT RC A G++ T S++* R + SA
Sbjct: 615 PG*PTTSSRGRCSAASLGSRRRTSGSSA*WRFSGEGSA 728
>gb|BE214490.1|BE214490 HV_CEb0003J19f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003J19f, mRNA sequence
Length = 707
Score = 135 bits (290), Expect(3) = 5e-054
Identities = 60/95 (63%), Positives = 70/95 (73%)
Frame = -2 / +3
Query: 1596 LLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASRPPSMAAEIIRYGPSDVAFVPYGEYWR 1417
L+LLR+GAV T VSSP AA AVLRT DH ASR S +II Y +DVAF PYGE WR
Sbjct: 243 LMLLRLGAVNTGVVSSPRAAAAVLRTHDHALASRSRSAVDDIIFYKRTDVAFAPYGEPWR 422
Query: 1416 QGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDKIR 1312
Q RK++TTHMLS +KV SFRH R+EE R+ + KIR
Sbjct: 423 QARKVVTTHMLSARKVNSFRHDREEEARIAVAKIR 527
Score = 113 bits (241), Expect(3) = 2e-041
Identities = 54/95 (56%), Positives = 62/95 (65%)
Frame = +2 / -2
Query: 1313 RILSMTSRTSSCRPWRKDCTFLVLSMCVVRSFLPCRQYSP*GTNATSEGP*RMISAAMDG 1492
RIL+ R SS R WR + TF LSMCVV +FL C Q SP*G ATS *+M+S+ +
Sbjct: 526 RILATAMRASSSRSWRNEFTFRALSMCVVTTFLACLQGSP*GAKATSVRL*KMMSSTAER 347
Query: 1493 GRDAKMWSWVRRTASAALGEDTNRVGTAPMRRSSR 1597
DA WS VRRTA+AA GEDT V TAP RRS R
Sbjct: 346 DLDASAWSCVRRTAAAARGEDTTPVFTAPRRRSMR 242
Score = 68.0 bits (142), Expect(3) = 5e-054
Identities = 26/48 (54%), Positives = 36/48 (75%)
Frame = -2 / +3
Query: 1281 VDLSDLLSGYTNDVVCRAVLGASHRNQGRNRLFSELTEINVSLLGGFN 1138
VD+S+LL Y ND+VC VLG +HR+ GRN+L +L IN++L+G FN
Sbjct: 561 VDMSELLGSYANDLVCPVVLGRNHRDNGRNKLVRQLIGINMALVGRFN 704
Score = 58.8 bits (122), Expect(3) = 2e-041
Identities = 26/48 (54%), Positives = 31/48 (64%)
Frame = +1 / -1
Query: 1138 VEPAEEGHVDLCQLAEQPVPPLVPVRRAKHRAAHHVVGVPGQEIAQVH 1281
VEP+ + HV QLA Q VPP+VPV +H AH VV V QE+A VH
Sbjct: 704 VEPSHQRHVYSDQLANQLVPPIVPVVSPEHHRAHQVVRVRAQELAHVH 561
Score = 47.8 bits (98), Expect(3) = 5e-054
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = -2 / +3
Query: 1677 IIGHLHLIGAETHISIRDLDAKHGRNGLLL 1588
+IGHLHL+G H+S RDL KHGR+ +LL
Sbjct: 165 VIGHLHLVGPLPHVSFRDLANKHGRDLMLL 254
Score = 37.3 bits (75), Expect(3) = 2e-041
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2 / -2
Query: 1583 RRSSRPLRPCLASRSRIEMWVSAPMRWRWPM 1675
RR S RPCL +RSR E P RWR P+
Sbjct: 259 RRRSMRSRPCLLARSRKETCGRGPTRWRCPI 167
>gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd1h15 3', mRNA sequence
Length = 586
Score = 188 bits (404), Expect(2) = 1e-053
Identities = 72/123 (58%), Positives = 94/123 (76%)
Frame = -2 / -3
Query: 717 LKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWALGRDRTTWEKPEEF 538
LKA IKETLRLH PAP L+PH + AD I+GY +P+GTRV+VN+ A+ RD ++WE EEF
Sbjct: 584 LKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEF 405
Query: 537 MPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIMLANLMYHFDWEVPG 358
+PERF+Q A + KG ++PFG+GRRICPG+NF A +EIMLANL+YHFDW++P
Sbjct: 404 LPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPP 225
Query: 357 SAA 349
+A
Sbjct: 224 GSA 216
Score = 114 bits (243), Expect = 2e-024
Identities = 58/119 (48%), Positives = 68/119 (57%)
Frame = +2 / +1
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+ QSKWY RLASMISM A KFIPG ILRP PNG + P + A C RSG N
Sbjct: 229 GSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL*SMAAALPPCMKRSGRN 408
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
SS S ++ SL A+ LT TRVP G *P +++SA+ SVSLM A R
Sbjct: 409 SSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR 585
Score = 43.7 bits (89), Expect(2) = 1e-053
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -2 / -3
Query: 348 GVSMDESFGLTLRRKEKLLLVPRI 277
G+SM ESFGLT+ RK+KLLLVP +
Sbjct: 209 GISMTESFGLTVHRKDKLLLVPLV 138
>gb|BM816704.1|BM816704 HB01G04_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01G04_T3.ab1 similar to Steroid
17-alpha-monooxygenase,Unspecific monooxygenase, mRNA
sequence
Length = 840
Score = 104 bits (221), Expect(5) = 1e-052
Identities = 45/111 (40%), Positives = 64/111 (57%)
Frame = -2 / +1
Query: 1119 PNMAMADVLLRLVSVMFRRLNQRWNDVFDELIQEHVQSRPSGESEESEADFIHVLLSIQQ 940
P++ VL R V R+ RW D+ D++I V S + DF+ +LLS+QQ
Sbjct: 280 PSLGRVGVLKRAVCAKAERVRDRWADLLDKVIDHRVSKLKSAVDHNKDGDFVDILLSVQQ 459
Query: 939 EYGLTTDNLKAILVDMFEAGIETSYLTLEYGMAELINNRHVMEKLQTEVRT 787
EY LT +++KA+L D+F G +TS LE+ MAEL+ M KLQ EVR+
Sbjct: 460 EYDLTREHMKALLTDVFIGGTDTSSNVLEFTMAELMRRPEFMGKLQDEVRS 612
Score = 77.1 bits (162), Expect(3) = 7e-026
Identities = 45/108 (41%), Positives = 59/108 (54%)
Frame = +2 / -2
Query: 785 VVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPASNMSTKMALRLSVVRPYSCCMESRTC 964
++LTS CSF M LLMSSAM S DVS+P N S + A S+VR YSC +SR
Sbjct: 614 ILLTSSCSFPMNSGLLMSSAMVNSRTLDDVSVPPINTSVRRAFMCSLVRSYSC*TDSRIS 435
Query: 965 MKSASLSSLSPEGLLCTCSWMSSSNTSFHLWLSRRNMTDTSRRSTSAM 1108
KS SL + + L T ++ SN S HL L+ + T+ ST +
Sbjct: 434 TKSPSLL*STADLSLLTRWSITLSNRSAHLSLTLSALAQTALLSTPTL 291
Score = 69.8 bits (146), Expect(5) = 1e-052
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = -2 / +1
Query: 1281 VDLSDLLSGYTNDVVCRAVLGASHRNQGRNRLFSELTEINVSLLGGFNLEDYFP 1120
VD+S+LL+ ++N + CR V G GR++LF EL E + LLGGFNLE+YFP
Sbjct: 121 VDMSELLNAFSNGMACRIVSGKFFLQNGRSKLFRELIEDSSRLLGGFNLEEYFP 282
Score = 45.5 bits (93), Expect(3) = 7e-026
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = +2 / -2
Query: 1121 GK*SSRLNPPRRDTLISVSSLNSLFRPWFRCDAPSTARHTTSLVYPDRRSLRST 1282
GK SS+L PPR S+SS N+L RP+ R + P T RH SL ST
Sbjct: 281 GKYSSKLKPPRSREESSMSSRNNLLRPFCRKNLPDTIRHAMPFENALSSSLMST 120
Score = 41.8 bits (85), Expect(5) = 1e-052
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = -2 / +1
Query: 1407 KLLTTHMLSTKKVQSFRHGRQEEVRLVMDKI 1315
+L+TTHMLS KKV+SFR EE + M KI
Sbjct: 1 ELVTTHMLSVKKVRSFRSAAIEEASMAMAKI 93
Score = 38.2 bits (77), Expect(5) = 1e-052
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2 / +2
Query: 720 YLKATIKETLRLHPPAPFLLPH 655
YL+A IKE+LRL+P P L PH
Sbjct: 668 YLRAVIKESLRLYPVVPLLAPH 733
Score = 33.6 bits (67), Expect(3) = 7e-026
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +2 / -2
Query: 1316 ILSMTSRTSSCRPWRKDCTFLVLSMCVVRS 1405
IL++ SS RKD TF LSMCVV S
Sbjct: 92 ILAIAMLASSMAALRKDRTFFTLSMCVVTS 3
Score = 28.6 bits (56), Expect(5) = 1e-052
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 633 IDGYFVPAGTRVLV 592
IDGY PAGTRV+V
Sbjct: 753 IDGYMGPAGTRVVV 794
>gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 5', mRNA sequence
Length = 606
Score = 182 bits (392), Expect(2) = 2e-052
Identities = 74/140 (52%), Positives = 99/140 (70%)
Frame = -2 / +3
Query: 807 LQTEVRTTMRSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEID 628
L T+++ +RS K M+ E+DL + YLKA IKETLRLH PAP L+PH + AD I+
Sbjct: 183 LMTKLQAEVRSSIPKGKHMVIEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVIN 362
Query: 627 GYFVPAGTRVLVNAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGR 448
GY +P+GTRV+VN+ A+ RD ++WE EEF+PERF+Q A + KG ++PFG+GR
Sbjct: 363 GYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGR 542
Query: 447 RICPGMNFGFATMEIMLANL 388
RICPG+NF A +EIML NL
Sbjct: 543 RICPGINFXIAXIEIMLXNL 602
Score = 93.2 bits (197), Expect(2) = 4e-030
Identities = 51/111 (45%), Positives = 60/111 (54%)
Frame = +2 / -3
Query: 389 RLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMNSSGFSHVVR 568
RL SMISM A KF PG ILRP PNG + P + A C RSG NSS S ++
Sbjct: 601 RLXSMISMXAMXKFXPGHILRPVPNGR*RKPFPL*SMAAALPPCMKRSGRNSSALSQLLG 422
Query: 569 SLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR* 721
SL A+ LT TRVP G *P +++SA+ SVSLM A R*
Sbjct: 421 SLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR* 269
Score = 59.7 bits (124), Expect(2) = 4e-030
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = +2 / -3
Query: 782 IVVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPASNMSTKMALRLSVVRPYSCCMESRT 961
+++LTS CS M MS AM YS DVS+PA NM T AL S+VR YS +ES++
Sbjct: 220 MLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTCSLVRLYSF*IESKS 41
Query: 962 CMKSAS 979
M S S
Sbjct: 40 WM*SVS 23
Score = 45.5 bits (93), Expect(2) = 2e-052
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -1 / +2
Query: 967 HTRSALHTARVRPHYGQSQGHLGGHVRGRYRDILPDARVRHGRAHQQQARH 815
H R A + RV+PH G Q +G HV + I+ +RHG AH + H
Sbjct: 35 HPRLAFDSERVQPHKGAGQSSVGDHVWSWHGHIIHSDGIRHGSAHAKPRPH 187
>gb|AV934105.1|AV934105 AV934105 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 5', mRNA sequence
Length = 544
Score = 143 bits (307), Expect(2) = 3e-052
Identities = 54/93 (58%), Positives = 71/93 (76%)
Frame = -2 / +1
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRLHP AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 262 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 441
Query: 576 GRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKD 478
GRD ++WE PEEF+PERF E + ++ KG D
Sbjct: 442 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGND 540
Score = 83.5 bits (176), Expect(2) = 3e-052
Identities = 33/67 (49%), Positives = 49/67 (73%)
Frame = -2 / +1
Query: 990 SEESEADFIHVLLSIQQEYGLTTDNLKAILVDMFEAGIETSYLTLEYGMAELINNRHVME 811
S+ + DF+ ++LS+QQEY LT +++KA+L D+F I+TS LE+ +AEL+ H+ME
Sbjct: 40 SDHKDDDFVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMME 219
Query: 810 KLQTEVR 790
KLQ EVR
Sbjct: 220 KLQDEVR 240
Score = 68.0 bits (142), Expect(2) = 1e-022
Identities = 36/81 (44%), Positives = 42/81 (51%)
Frame = +2 / -3
Query: 476 RSLPFMWTSTAPGSCTNRSGMNSSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEX 655
+S P S N SGMNSSG+S + SLP A ALT TRVPAGT PS+ +SA+
Sbjct: 542 KSFPLKLICIVLPSSVNLSGMNSSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMAR 363
Query: 656 XXXXXXXXXXXXSVSLMVALR 718
S S M ALR
Sbjct: 362 CGARRGATGCSRSDSFMTALR 300
Score = 59.7 bits (124), Expect(2) = 1e-022
Identities = 31/66 (46%), Positives = 38/66 (57%)
Frame = +2 / -3
Query: 785 VVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPASNMSTKMALRLSVVRPYSCCMESRTC 964
+ LTS CSFS+ C LLMSSA S DVSI S + A S+VR YSC ++
Sbjct: 245 IPLTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYSCWTDNIIS 66
Query: 965 MKSASL 982
KS+SL
Sbjct: 65 TKSSSL 48
>gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16e06 3', mRNA sequence
Length = 594
Score = 182 bits (391), Expect(2) = 8e-052
Identities = 69/119 (57%), Positives = 91/119 (76%)
Frame = -2 / -2
Query: 705 IKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWALGRDRTTWEKPEEFMPER 526
IKETLRLH PAP L+PH + AD I+GY +P+GTRV+VN+ A+ RD ++WE EEF+PER
Sbjct: 590 IKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPER 411
Query: 525 FVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIMLANLMYHFDWEVPGSAA 349
F+Q A + KG ++PFG+GRRICPG+NF A +EIMLANL+YHFDW++P +A
Sbjct: 410 FMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPGSA 234
Score = 110 bits (234), Expect = 4e-023
Identities = 56/115 (48%), Positives = 66/115 (57%)
Frame = +2 / +1
Query: 362 GTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMN 541
G+ QSKWY RLASMISM A KFIPG ILRP PNG + P + A C RSG N
Sbjct: 247 GSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL*SMAAALPPCMKRSGRN 426
Query: 542 SSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLM 706
SS S ++ SL A+ LT TRVP G *P +++SA+ SVSLM
Sbjct: 427 SSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLM 591
Score = 43.7 bits (89), Expect(2) = 8e-052
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -2 / -2
Query: 348 GVSMDESFGLTLRRKEKLLLVPRI 277
G+SM ESFGLT+ RK+KLLLVP +
Sbjct: 227 GISMTESFGLTVHRKDKLLLVPLV 156
>gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. vulgare cDNA clone HB08M23
5-PRIME, mRNA sequence
Length = 624
Score = 179 bits (386), Expect(2) = 1e-051
Identities = 73/139 (52%), Positives = 98/139 (70%)
Frame = -2 / +2
Query: 807 LQTEVRTTMRSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEID 628
L T+++ +RS K M+ E+DL + YLKA IKETLRLH PAP L+PH + AD I+
Sbjct: 206 LMTKLQAEVRSSIPKGKHMVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCIIN 385
Query: 627 GYFVPAGTRVLVNAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGR 448
GY +P+GTRV+VN+ A+ RD ++WE EEF+PERF+Q A + KG ++PFG+ R
Sbjct: 386 GYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTXR 565
Query: 447 RICPGMNFGFATMEIMLAN 391
RICPG+NF A +EIMLAN
Sbjct: 566 RICPGINFAIAAIEIMLAN 622
Score = 91.3 bits (193), Expect(2) = 8e-030
Identities = 51/111 (45%), Positives = 60/111 (54%)
Frame = +2 / -1
Query: 389 RLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMNSSGFSHVVR 568
RLASMISM A KFIPG ILR PNG + P + A C RSG NSS S ++
Sbjct: 624 RLASMISMAAMAKFIPGHILRXVPNGR*RKPFPL*SMAAALPPCMKRSGRNSSALSQLLG 445
Query: 569 SLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR* 721
SL A+ LT TRVP G *P + +SA+ SVSL+ A R*
Sbjct: 444 SLAIARLLTMTRVPDGMV*PFMMQSAMARWGTRSGAGM*SRSVSLITAFR* 292
Score = 60.6 bits (126), Expect(2) = 8e-030
Identities = 34/78 (43%), Positives = 44/78 (56%)
Frame = +2 / -1
Query: 782 IVVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPASNMSTKMALRLSVVRPYSCCMESRT 961
+++LTS CS M MS AM YS DVS+PA NM T AL S+VR YS +ES++
Sbjct: 243 MLLLTSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTCSLVRLYSF*IESKS 64
Query: 962 CMKSASLSSLSPEGLLCT 1015
M S S + L C+
Sbjct: 63 WM*SVSSPNAGAGLLSCS 10
Score = 45.5 bits (93), Expect(2) = 1e-051
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -1 / +1
Query: 967 HTRSALHTARVRPHYGQSQGHLGGHVRGRYRDILPDARVRHGRAHQQQARH 815
H R A + RV+PH G Q +G HV + I+ +RHG AH + H
Sbjct: 58 HPRLAFDSERVQPHKGTGQSSVGDHVWSWHGHIIHSDGIRHGSAHAKPRPH 210
>gb|AV934098.1|AV934098 AV934098 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 5', mRNA sequence
Length = 638
Score = 114 bits (243), Expect(3) = 1e-051
Identities = 43/70 (61%), Positives = 56/70 (80%)
Frame = -2 / +3
Query: 756 DMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWAL 577
++++E D+ +M YL+A IKE+LRLHP AP L PH + AD IDGY VPAGTRV+VNAWA+
Sbjct: 333 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 512
Query: 576 GRDRTTWEKP 547
GRD ++WE P
Sbjct: 513 GRDPSSWEYP 542
Score = 83.5 bits (176), Expect(3) = 1e-051
Identities = 33/67 (49%), Positives = 49/67 (73%)
Frame = -2 / +3
Query: 990 SEESEADFIHVLLSIQQEYGLTTDNLKAILVDMFEAGIETSYLTLEYGMAELINNRHVME 811
S+ + DF+ ++LS+QQEY LT +++KA+L D+F I+TS LE+ +AEL+ H+ME
Sbjct: 111 SDHKDDDFVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMME 290
Query: 810 KLQTEVR 790
KLQ EVR
Sbjct: 291 KLQDEVR 311
Score = 59.7 bits (124), Expect(3) = 8e-022
Identities = 31/66 (46%), Positives = 38/66 (57%)
Frame = +2 / -2
Query: 785 VVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPASNMSTKMALRLSVVRPYSCCMESRTC 964
+ LTS CSFS+ C LLMSSA S DVSI S + A S+VR YSC ++
Sbjct: 316 IPLTSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYSCWTDNIIS 137
Query: 965 MKSASL 982
KS+SL
Sbjct: 136 TKSSSL 119
Score = 50.6 bits (104), Expect(3) = 8e-022
Identities = 26/57 (45%), Positives = 31/57 (54%)
Frame = +2 / -2
Query: 548 GFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR 718
G+S + SLP A ALT TRVPAGT PS+ +SA+ S S M ALR
Sbjct: 541 GYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALR 371
Score = 45.5 bits (93), Expect(3) = 1e-051
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -2 / +1
Query: 546 EEFMPERFVQEPGAVDVHMKGKDLRFIPFGS 454
EEF+PERF E + ++ KG D +F+PFG+
Sbjct: 544 EEFIPERFTDEGSTMHINFKGNDFQFLPFGA 636
Score = 32.2 bits (64), Expect(3) = 8e-022
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +2 / -1
Query: 452 PEPNGMNLRSLPFMWTSTAPGSCTNRSGMNSS 547
P PNG N +S P S N SGMNSS
Sbjct: 638 PAPNGKN*KSFPLKLICIVLPSSVNLSGMNSS 543
>gb|BE602159.2|BE602159 HVSMEh0102M13f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0102M13f, mRNA sequence
Length = 654
Score = 91.3 bits (193), Expect(4) = 9e-051
Identities = 38/63 (60%), Positives = 46/63 (73%)
Frame = -2 / +1
Query: 1641 HISIRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASRPPSMAAEIIRY 1462
H+S+R L HG +GLLLL +G+VP L VSSP A AVLRT DH+FASRPPS A+ + Y
Sbjct: 4 HVSLRSLSKTHGPDGLLLLHLGSVPNLVVSSPWATQAVLRTNDHLFASRPPSRIADNLLY 183
Query: 1461 GPS 1453
G S
Sbjct: 184 GRS 192
Score = 85.4 bits (180), Expect(4) = 9e-051
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = -2 / +1
Query: 1314 RXXXXXXXXXAVDLSDLLSGYTNDVVCRAVLGASHRNQGRNRLFSELTEINVSLLGGFNL 1135
R AVDLS++++ Y NDVVCRAV G R +GRN++F EL E N +L+GGFN+
Sbjct: 328 RIREAAAASVAVDLSEVVNTYANDVVCRAVSGKFFRAEGRNKMFRELIESNSALVGGFNM 507
Query: 1134 EDYFP 1120
EDYFP
Sbjct: 508 EDYFP 522
Score = 83.5 bits (176), Expect(2) = 7e-026
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = -2 / +1
Query: 1494 PPSMAAEIIRYGPSDVAFVPYGEYWRQGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMDKI 1315
P +A ++ SD+AF PYGE+WRQ RKL+TTH+ + KKVQS R RQ+EV++V+ +I
Sbjct: 154 PSRIADNLLYGRSSDIAFSPYGEHWRQARKLVTTHLFTVKKVQSLRDARQQEVKVVISRI 333
Query: 1314 R 1312
R
Sbjct: 334 R 336
Score = 73.5 bits (154), Expect(3) = 3e-035
Identities = 33/63 (52%), Positives = 40/63 (63%)
Frame = +2 / -2
Query: 1448 TSEGP*RMISAAMDGGRDAKMWSWVRRTASAALGEDTNRVGTAPMRRSSRPLRPCLASRS 1627
+ + P R +SA +DGGRDA WS+VRRTA A G+DT R GT P RS RP P + R
Sbjct: 197 SDDRPYRRLSAILDGGRDANRWSFVRRTAWVAHGDDTTRFGTEPRWRSKRPSGP*VLERL 18
Query: 1628 RIE 1636
R E
Sbjct: 17 RRE 9
Score = 60.6 bits (126), Expect(3) = 3e-035
Identities = 32/54 (59%), Positives = 34/54 (62%)
Frame = +2 / -2
Query: 1121 GK*SSRLNPPRRDTLISVSSLNSLFRPWFRCDAPSTARHTTSLVYPDRRSLRST 1282
GK*SS LNPP R S+SSLN LF P + P TARHTTSL SLRST
Sbjct: 521 GK*SSMLNPPTRAEFDSISSLNILFLPSALKNLPDTARHTTSLA*VLTTSLRST 360
Score = 55.1 bits (114), Expect(2) = 7e-026
Identities = 25/44 (56%), Positives = 26/44 (59%)
Frame = -3 / +2
Query: 1253 TPTTWCAARCLARRTGTKGGTGCSAS*QRSTCPSSAGSTSRTTS 1122
TPTTWCAA C +G K G CS S* T SS G T RTTS
Sbjct: 389 TPTTWCAALCRVSSSGQKAGIKCSES*SSQTRLSSEGLTWRTTS 520
Score = 54.2 bits (112), Expect(3) = 3e-035
Identities = 26/48 (54%), Positives = 30/48 (62%)
Frame = +2 / -2
Query: 1313 RILSMTSRTSSCRPWRKDCTFLVLSMCVVRSFLPCRQYSP*GTNATSE 1456
RIL +T+ TS R R D TFL + CVV SFL C Q SP*G A S+
Sbjct: 335 RILEITTLTSC*RASRSDWTFLTVKRCVVTSFLACLQCSP*GEKAMSD 192
Score = 52.4 bits (108), Expect(4) = 9e-051
Identities = 26/41 (63%), Positives = 27/41 (65%)
Frame = -3 / +2
Query: 1460 GPRTSRSCPTASTGGRAGNSSPRTCSAPRRCSPSAMADRKR 1338
G TS S PTASTGGR G+SSPRT S RR S SA KR
Sbjct: 188 GRPTSPSPPTASTGGRRGSSSPRTSSRSRRSSRSATPVNKR 310
Score = 29.5 bits (58), Expect(4) = 9e-051
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -2 / +1
Query: 1119 PNMAMADVLLRLVSVMFRRLNQRWNDVFDELIQEH 1015
P +A +L R V +++RW+++ + +I+EH
Sbjct: 520 PRLAKVRLLNRFVRNNVETMHRRWDELLETIIREH 624
>gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 5', mRNA sequence
Length = 533
Score = 200 bits (431), Expect = 2e-050
Identities = 75/148 (50%), Positives = 104/148 (70%)
Frame = -2 / +1
Query: 810 KLQTEVRTTMRSPDGKKLDMLAEEDLGSMPYLKATIKETLRLHPPAPFLLPHYSTADSEI 631
++ ++ +RS K D + ++DL +PYLKA IKETLRLH P P ++PH S + I
Sbjct: 88 RVMAMLQAEVRSTIPKGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECII 267
Query: 630 DGYFVPAGTRVLVNAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSG 451
+GY +P+GTR +N +A+ RD + WE PEEFMPERF++ A + KG D ++ PFGSG
Sbjct: 268 NGYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSG 447
Query: 450 RRICPGMNFGFATMEIMLANLMYHFDWE 367
RRICPG+NF AT+++ML NLMYHFDW+
Sbjct: 448 RRICPGINFATATIQLMLTNLMYHFDWK 531
Score = 105 bits (223), Expect(2) = 8e-030
Identities = 56/118 (47%), Positives = 66/118 (55%)
Frame = +2 / -1
Query: 371 QSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTNRSGMNSSG 550
QSKWYMR SM MVA K IPG ILRP+PNG +S P + A NRSGMNSSG
Sbjct: 527 QSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPPSMNRSGMNSSG 348
Query: 551 FSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLMVALR*G 724
S ++ SL A L + RVP G *P + S++E SVSL+ A R*G
Sbjct: 347 LSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*G 174
Score = 46.9 bits (96), Expect(2) = 8e-030
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +2 / -1
Query: 782 IVVLTSVCSFSMTCLLLMSSAMPYSSVR*DVSIPASNM 895
+V+LTS CS +MT +S M YSS DVS+PASNM
Sbjct: 128 MVLLTSACSMAMTRGFCISRTMAYSSTMVDVSVPASNM 15
>gb|CA017939.1|CA017939 HV06O02r HV Hordeum vulgare subsp. vulgare cDNA clone HV06O02
5-PRIME, mRNA sequence
Length = 500
Score = 142 bits (305), Expect(2) = 3e-050
Identities = 56/91 (61%), Positives = 71/91 (78%)
Frame = -2 / +2
Query: 1584 RIGAVPTLFVSSPSAADAVLRTQDHIFASRPPSMAAEIIRYGPSDVAFVPYGEYWRQGRK 1405
R+GAVPTL VS+P+AA AVLRT DH+FASRP S A I+ YG +DV F PYG +WRQ +K
Sbjct: 8 RLGAVPTLVVSTPAAAQAVLRTHDHVFASRPHSPVAHILFYGSADVVFAPYGHHWRQVKK 187
Query: 1404 LLTTHMLSTKKVQSFRHGRQEEVRLVMDKIR 1312
+ TTH+L+ +KV S+RH RQ EV LV+ K+R
Sbjct: 188 ISTTHLLTARKVHSYRHARQHEVNLVLAKVR 280
Score = 86.8 bits (183), Expect(2) = 2e-022
Identities = 44/89 (49%), Positives = 52/89 (58%)
Frame = +2 / -3
Query: 1313 RILSMTSRTSSCRPWRKDCTFLVLSMCVVRSFLPCRQYSP*GTNATSEGP*RMISAAMDG 1492
R L+ T TS R WR + TFL +S VV FL RQ+ P*G TS P*+ + A +
Sbjct: 279 RTLARTRFTSCWRAWR*EWTFLAVSRWVVEIFLTWRQWWP*GAKTTSAEP*KRMWATGEW 100
Query: 1493 GRDAKMWSWVRRTASAALGEDTNRVGTAP 1579
G DA WS VR TA AA G +T VGTAP
Sbjct: 99 GLDANTWSCVRSTACAAAGVETTSVGTAP 13
Score = 77.6 bits (163), Expect(2) = 3e-050
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = -2 / +2
Query: 1281 VDLSDLLSGYTNDVVCRAVLGASHRNQGRNRLFSELTEINVSLLGGFNLEDYFP 1120
+D+S+LL+ + D+VC AV G S R +G N+ F EL E N SL+GGFNLED+FP
Sbjct: 305 LDMSELLNAFVFDIVCHAVAGNSFRERGLNKHFRELVEANASLIGGFNLEDHFP 466
Score = 40.0 bits (81), Expect(2) = 2e-022
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = +2 / -3
Query: 1121 GK*SSRLNPPRRDTLISVSSLNSLFRPWFRCDAPSTARHTTS 1246
GK SSRL PP + L S SS L P + P+TA HT S
Sbjct: 465 GKWSSRLKPPMSEALASTSSRKCLLSPRSLKELPATAWHTMS 340
>gb|AV918446.1|AV918446 AV918446 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21b10 3', mRNA sequence
Length = 604
Score = 176 bits (378), Expect(2) = 5e-050
Identities = 70/124 (56%), Positives = 90/124 (72%)
Frame = -2 / -2
Query: 717 LKATIKETLRLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVNAWALGRDRTTWEKPEEF 538
LKA IKETLRLH PAP L+PH + AD I+GY +P+GTRV+VN+ A+ RD ++WE EEF
Sbjct: 603 LKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEF 424
Query: 537 MPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEIMLANLMYHFDWEVPG 358
+PERF+Q A + KG ++PFG+GRRICPG+NF A +EIMLANL+YHF E
Sbjct: 423 LPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFILEAAT 244
Query: 357 SAAG 346
+G
Sbjct: 243 GISG 232
Score = 110 bits (234), Expect = 4e-023
Identities = 57/124 (45%), Positives = 66/124 (53%)
Frame = +2 / +2
Query: 347 PAAEPGTSQSKWYMRLASMISMVANPKFIPGQILRPEPNGMNLRSLPFMWTSTAPGSCTN 526
P S KWY RLASMISM A KFIPG ILRP PNG + P + A C
Sbjct: 233 PLIPVAASSMKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL*SMAAALPPCMK 412
Query: 527 RSGMNSSGFSHVVRSLPSAQALTRTRVPAGTK*PSISESAVEXXXXXXXXXXXXXSVSLM 706
RSG NSS S ++ SL A+ LT TRVP G *P +++SA+ SVSLM
Sbjct: 413 RSGRNSSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLM 592
Query: 707 VALR 718
A R
Sbjct: 593 TAFR 604
Score = 43.7 bits (89), Expect(2) = 5e-050
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -2 / -3
Query: 348 GVSMDESFGLTLRRKEKLLLVPRI 277
G+SM ESFGLT+ RK+KLLLVP +
Sbjct: 227 GISMTESFGLTVHRKDKLLLVPLV 156
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 842,059,365
Number of Sequences: 312970
Number of extensions: 14920149
Number of successful extensions: 210103
Number of sequences better than 1.0e-020: 260
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 25342935189
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)