TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716424.2.3
(1842 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF627742.1|BF627742 HVSMEb0005K21f Hordeum vulgare seedl... 181 4e-063
gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedl... 177 2e-062
gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA li... 158 1e-060
gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedl... 90 3e-060
gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA li... 182 9e-060
gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare s... 177 3e-059
gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA li... 145 5e-058
gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA li... 185 3e-057
gb|BE420993.1|BE420993 HWM004.F10 ITEC HWM Barley Leaf Libr... 146 6e-057
gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA li... 182 4e-056
gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA li... 194 7e-055
gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA li... 194 3e-054
gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA li... 194 3e-054
gb|BG301073.1|BG301073 HVSMEb0019H09f Hordeum vulgare seedl... 179 5e-054
gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA li... 182 1e-053
gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA li... 182 6e-053
gb|BF261803.3|BF261803 HV_CEa0002E08f Hordeum vulgare seedl... 115 1e-052
gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA li... 159 4e-052
gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA li... 194 1e-051
gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA li... 194 1e-051
gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA li... 182 1e-051
gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA li... 193 1e-051
gb|BQ471556.1|BQ471556 HV02M13r HV Hordeum vulgare subsp. v... 114 2e-051
gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. v... 158 2e-051
gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA li... 182 3e-051
gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA li... 182 1e-050
gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA li... 182 2e-050
gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA li... 182 2e-050
gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA li... 182 1e-049
gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA li... 182 2e-048
gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA li... 182 2e-048
gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA li... 189 3e-048
gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA li... 184 2e-047
gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA li... 188 1e-046
gb|AV934098.1|AV934098 AV934098 K. Sato unpublished cDNA li... 86 1e-046
gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P4... 74 5e-046
gb|AV915851.1|AV915851 AV915851 K. Sato unpublished cDNA li... 92 9e-046
gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA li... 171 4e-045
gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA li... 182 5e-045
gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA li... 173 7e-045
emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for p... 73 9e-045
gb|AV932347.1|AV932347 AV932347 K. Sato unpublished cDNA li... 142 1e-044
gb|CA017939.1|CA017939 HV06O02r HV Hordeum vulgare subsp. v... 139 2e-044
gb|CA018489.1|CA018489 HV08M10r HV Hordeum vulgare subsp. v... 179 4e-044
gb|AV934261.1|AV934261 AV934261 K. Sato unpublished cDNA li... 142 2e-043
gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA li... 168 2e-043
gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA li... 163 5e-042
gb|AV921548.1|AV921548 AV921548 K. Sato unpublished cDNA li... 160 9e-042
gb|CA015705.1|CA015705 HV12J09u HV Hordeum vulgare subsp. v... 160 9e-042
gb|AV913374.1|AV913374 AV913374 K. Sato unpublished cDNA li... 160 2e-041
gb|BF621561.1|BF621561 HVSMEa0011G21f Hordeum vulgare seedl... 170 3e-041
gb|AV923778.1|AV923778 AV923778 K. Sato unpublished cDNA li... 170 3e-041
gb|CA019109.1|CA019109 HV10M21r HV Hordeum vulgare subsp. v... 170 3e-041
gb|AV918673.1|AV918673 AV918673 K. Sato unpublished cDNA li... 160 3e-041
gb|AV934105.1|AV934105 AV934105 K. Sato unpublished cDNA li... 112 2e-040
gb|AV918446.1|AV918446 AV918446 K. Sato unpublished cDNA li... 156 6e-040
gb|BE214490.1|BE214490 HV_CEb0003J19f Hordeum vulgare seedl... 122 2e-039
gb|BJ461185.1|BJ461185 BJ461185 K. Sato unpublished cDNA li... 163 3e-039
gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA li... 148 9e-039
gb|AV930901.1|AV930901 AV930901 K. Sato unpublished cDNA li... 150 3e-038
gb|BE602159.2|BE602159 HVSMEh0102M13f Hordeum vulgare 5-45 ... 99 5e-038
gb|BF065379.1|BF065379 HV_CEb0012E10f Hordeum vulgare seedl... 142 1e-037
gb|AV925268.1|AV925268 AV925268 K. Sato unpublished cDNA li... 144 2e-037
gb|BJ460485.1|BJ460485 BJ460485 K. Sato unpublished cDNA li... 156 4e-037
gb|BJ547149.1|BJ547149 BJ547149 K. Sato unpublished cDNA li... 77 1e-036
gb|BE196002.1|BE196002 HVSMEh0091B12f Hordeum vulgare 5-45 ... 137 7e-036
gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA li... 130 9e-036
gb|BG300331.1|BG300331 HVSMEb0012I19f Hordeum vulgare seedl... 151 1e-035
gb|BG344914.2|BG344914 HVSMEg0016N10f Hordeum vulgare pre-a... 134 2e-035
gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA li... 84 2e-034
gb|CA009631.1|CA009631 HU14K18r HU Hordeum vulgare subsp. v... 123 2e-034
gb|BJ463196.1|BJ463196 BJ463196 K. Sato unpublished cDNA li... 77 1e-033
gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. v... 70 9e-033
gb|BI952196.1|BI952196 HVSMEm0004P09f Hordeum vulgare green... 82 1e-032
gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA li... 73 3e-032
gb|BG299744.1|BG299744 HVSMEa0021K06f Hordeum vulgare seedl... 126 3e-032
gb|BE216646.1|BE216646 HV_CEb0011B08f Hordeum vulgare seedl... 122 1e-031
gb|AV912854.1|AV912854 AV912854 K. Sato unpublished cDNA li... 86 2e-030
gb|AV925764.1|AV925764 AV925764 K. Sato unpublished cDNA li... 133 2e-030
gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedl... 79 1e-029
gb|BM443957.2|BM443957 EBem09_SQ002_E09_R embryo, 1 Day ger... 122 3e-029
gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA li... 70 5e-029
gb|BF253916.1|BF253916 HVSMEf0002H19f Hordeum vulgare seedl... 129 5e-029
gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA li... 70 6e-029
gb|BQ461073.1|BQ461073 HE01E18r HE Hordeum vulgare subsp. v... 96 1e-028
gb|CA013705.1|CA013705 HT09E03r HT Hordeum vulgare subsp. v... 68 2e-028
gb|AV916579.1|AV916579 AV916579 K. Sato unpublished cDNA li... 62 2e-028
gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA li... 70 3e-028
gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA li... 100 3e-028
gb|CA006248.1|CA006248 HU14K18u HU Hordeum vulgare subsp. v... 120 6e-028
gb|CA016039.1|CA016039 HV10M21u HV Hordeum vulgare subsp. v... 105 1e-027
gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA li... 70 1e-027
gb|AV913156.1|AV913156 AV913156 K. Sato unpublished cDNA li... 85 1e-027
gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedl... 65 3e-027
gb|BJ547848.1|BJ547848 BJ547848 K. Sato unpublished cDNA li... 122 6e-027
gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa... 62 3e-026
gb|AU252315.1|AU252315 AU252315 salt-stressed barley root c... 74 5e-026
gb|BG416486.2|BG416486 HVSMEk0012I14f Hordeum vulgare testa... 69 5e-026
gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA li... 70 2e-025
gb|BF259778.3|BF259778 HVSMEf0020D20f Hordeum vulgare seedl... 70 6e-025
gb|AV917238.1|AV917238 AV917238 K. Sato unpublished cDNA li... 74 6e-025
gb|AJ434580.1|AJ434580 AJ434580 S00002 Hordeum vulgare subs... 68 6e-025
gb|BI958239.1|BI958239 HVSMEn0014A11f Hordeum vulgare rachi... 80 1e-024
gb|BE519761.3|BE519761 HV_CEb0021C04f Hordeum vulgare seedl... 57 1e-024
gb|AU252324.1|AU252324 AU252324 salt-stressed barley root c... 58 1e-024
gb|BF627303.3|BF627303 HVSMEb0004I01f Hordeum vulgare seedl... 70 4e-024
gb|AV922397.1|AV922397 AV922397 K. Sato unpublished cDNA li... 70 4e-024
gb|BJ466913.1|BJ466913 BJ466913 K. Sato unpublished cDNA li... 70 4e-024
gb|AV919240.1|AV919240 AV919240 K. Sato unpublished cDNA li... 70 4e-024
gb|AV922497.1|AV922497 AV922497 K. Sato unpublished cDNA li... 70 4e-024
gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachi... 67 4e-024
gb|AV919113.1|AV919113 AV919113 K. Sato unpublished cDNA li... 70 4e-024
gb|AV917809.1|AV917809 AV917809 K. Sato unpublished cDNA li... 70 4e-024
gb|AV931728.1|AV931728 AV931728 K. Sato unpublished cDNA li... 67 4e-024
gb|AL504160.1|AL504160 AL504160 Hordeum vulgare Barke roots... 67 4e-024
gb|AV917240.1|AV917240 AV917240 K. Sato unpublished cDNA li... 70 4e-024
gb|AV917724.1|AV917724 AV917724 K. Sato unpublished cDNA li... 70 4e-024
gb|BQ664275.1|BQ664275 HV02K08u HV Hordeum vulgare subsp. v... 67 4e-024
gb|AV918924.1|AV918924 AV918924 K. Sato unpublished cDNA li... 70 4e-024
gb|AV922407.1|AV922407 AV922407 K. Sato unpublished cDNA li... 70 4e-024
gb|CA019622.1|CA019622 HV12J09r HV Hordeum vulgare subsp. v... 74 4e-024
gb|BJ465805.1|BJ465805 BJ465805 K. Sato unpublished cDNA li... 70 4e-024
gb|BF624750.2|BF624750 HVSMEa0017K07f Hordeum vulgare seedl... 88 5e-024
gb|BU995588.1|BU995588 HM10L15r HM Hordeum vulgare subsp. v... 111 1e-023
gb|CA016903.1|CA016903 HV05M12u HV Hordeum vulgare subsp. v... 76 2e-023
gb|CB880227.1|CB880227 HM05O04w HM Hordeum vulgare subsp. v... 63 4e-023
gb|BQ758724.1|BQ758724 EBma07_SQ002_J15_R maternal, 21 DPA,... 77 5e-023
gb|CA012725.1|CA012725 HT06E05r HT Hordeum vulgare subsp. v... 73 6e-023
gb|BE519743.1|BE519743 HV_CEb0021A21f Hordeum vulgare seedl... 65 6e-023
gb|BQ664118.1|BQ664118 HV01P03w HV Hordeum vulgare subsp. v... 65 8e-023
gb|AV928038.1|AV928038 AV928038 K. Sato unpublished cDNA li... 63 1e-022
gb|BI956493.1|BI956493 HVSMEn0003M04f Hordeum vulgare rachi... 80 2e-022
gb|BQ664209.1|BQ664209 HV02F12u HV Hordeum vulgare subsp. v... 79 2e-022
gb|BI957225.1|BI957225 HVSMEn0008D16f Hordeum vulgare rachi... 50 5e-022
gb|AV833831.1|AV833831 AV833831 K. Sato unpublished cDNA li... 105 6e-022
gb|BF624213.1|BF624213 HVSMEa0012L22f Hordeum vulgare seedl... 67 8e-022
gb|CA025677.1|CA025677 HZ52M20r HZ Hordeum vulgare subsp. v... 73 1e-021
gb|AV922276.1|AV922276 AV922276 K. Sato unpublished cDNA li... 97 2e-021
gb|BE195199.3|BE195199 HVSMEh0088J02f Hordeum vulgare 5-45 ... 63 3e-021
gb|CA009374.1|CA009374 HU13P05r HU Hordeum vulgare subsp. v... 62 4e-021
gb|BM101180.2|BM101180 EBpi01_SQ003_C01_R pistil, 1 DPA, no... 63 5e-021
gb|BM816704.1|BM816704 HB01G04_T3.ab1 HB Hordeum vulgare su... 85 5e-021
>gb|BF627742.1|BF627742 HVSMEb0005K21f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005K21f, mRNA sequence
Length = 818
Score = 181 bits (390), Expect(2) = 4e-063
Identities = 66/124 (53%), Positives = 97/124 (78%)
Frame = +2 / +3
Query: 209 IVGHLHHIGPQTHISLQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHIFAS 388
++GHLH +GP H+SL+ L A++G +G + +R GAVPTL+VS+P+AA+AV+RTHDH+FAS
Sbjct: 153 VIGHLHQVGPLPHVSLRHLAAEHGRDGLMLVRLGAVPTLVVSTPAAAQAVLRTHDHVFAS 332
Query: 389 RPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEVCLVVDN 568
RP S +HIL Y + DV F+P G +W+Q +K+ THLL+ +KV+S+RH R+ EV LV+
Sbjct: 333 RPHSPVAHILFYGSADVVFAPYGHHWRQVKKISTTHLLTARKVHSYRHARQHEVNLVLAK 512
Query: 569 LREA 580
+R+A
Sbjct: 513 VRDA 524
Score = 95.5 bits (202), Expect(2) = 1e-027
Identities = 50/106 (47%), Positives = 56/106 (52%)
Frame = -1 / -2
Query: 531 WRKE*TFLLLSRCVFISFLVCCQYSPSGEKATSQVL*RRMWEAMDHGRDAKMWSWVRITA 352
WR E TFL +SR V FL Q+ P G K TS *+RMW + G DA WS VR TA
Sbjct: 475 WR*EWTFLAVSRWVVEIFLTWRQWWP*GAKTTSAEP*KRMWATGEWGLDANTWSCVRSTA 296
Query: 351 SAALGDDTIRVGTAPARRNRNPLCPYLATSSWSEMWVWGPMWCRCP 214
AA G +T VGTAP R + P P A E GP WCR P
Sbjct: 295 CAAAGVETTSVGTAPRRTSMRPSRPCSAARWRRETCGRGPTWCRWP 158
Score = 81.7 bits (172), Expect(2) = 4e-063
Identities = 36/95 (37%), Positives = 54/95 (56%)
Frame = +2 / +3
Query: 584 AKSPSTAVDMSEVLAAYTNDVVSRSVLGSTHRKKGRNTLFREMTMTNVDLLVGFNLEYYI 763
A A+DMSE+L A+ D+V +V G++ R++G FRE+ N L+ GFNLE +
Sbjct: 522 AMRAGVALDMSELLNAFVFDIVCHAVAGNSFRERGTQQHFRELVEANASLIGGFNLEDHF 701
Query: 764 PRWPLTDLLFRLVCWKVTRHLKRWDSLLEEVIHEH 868
P ++ +VC K R K+W LL+ +I EH
Sbjct: 702 PALVKLEIFRXIVCAKARRVNKQWGRLLDRLIDEH 806
Score = 48.7 bits (100), Expect(2) = 1e-027
Identities = 28/76 (36%), Positives = 37/76 (48%)
Frame = -3 / -1
Query: 868 VFVDHLLQQGVPALEVARDLPAHEPEEQVRQRPPRDVVLQVEPHQEVHVGHGHLPEQRVP 689
+F+D ++Q P + L A+ E + R+VVLQVE E VG LPE +
Sbjct: 806 MFIDEPIEQSSPLFVYSPGLGANNXSEDFQLHQCREVVLQVEAADERGVGLHQLPEVLLS 627
Query: 688 AFLPVRRAQHRPAHHV 641
LP R A H AH V
Sbjct: 626 PSLPERIACHGVAHDV 579
>gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0006N15f, mRNA sequence
Length = 710
Score = 177 bits (382), Expect(3) = 2e-062
Identities = 72/131 (54%), Positives = 88/131 (67%)
Frame = +2 / +2
Query: 1124 MIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAIG 1303
M+ EDDL+ L YLKA +KE LR + ADC I+GY IP+ TRV+VN AI
Sbjct: 317 MVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIA 496
Query: 1304 RDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIMLA 1483
RDP WE EEF+PERFM+ G + Y G F YLPFG+GRRICPG N A+ +EIML
Sbjct: 497 RDPNSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINLAIGAIEIMLT 676
Query: 1484 NLMYHFDWEVP 1516
NL+YHFDW++P
Sbjct: 677 NLVYHFDWKLP 709
Score = 102 bits (217), Expect(2) = 9e-029
Identities = 55/119 (46%), Positives = 65/119 (54%)
Frame = -1 / -3
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G+ QSKWY RL SMISM A+ PG I RP PNGR K +PL* + + P M SG N
Sbjct: 708 GSFQSKWYTRLVSMISMAPMARFIPGHILRPVPNGR*RKPFPL*SMAAALPPCMKRSGRN 529
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFR 1159
SS SQ GSL +A+ T TRV GM P + QSA+ S S + AFR
Sbjct: 528 SSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLITAFR 352
Score = 65.7 bits (137), Expect(3) = 2e-062
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = +2 / +2
Query: 905 ESDDFIDIFLSRYEEYGFTMDNVKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKKLQ 1084
+ D+I LS +EY T + VK+ L+ +F A +TSY+V+E AMA LM + +M KLQ
Sbjct: 101 DDTDYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQ 280
Query: 1085 AEVRA 1099
AEVR+
Sbjct: 281 AEVRS 295
Score = 46.0 bits (94), Expect(2) = 9e-029
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = -1 / -3
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSMAASNTFMRRDLTLSMVKPYSSYLE 934
TSACS M + MS AMA S T Y+VS+ A N LT S+V+ YS +E
Sbjct: 288 TSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTCSLVRLYSF*IE 130
Score = 36.3 bits (73), Expect(3) = 2e-062
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2 / +2
Query: 797 LVCWKVTRHLKRWDSLLEEVIHEH 868
+VC + R K WD LLE +IHEH
Sbjct: 2 MVCGRARRVNKMWDDLLESLIHEH 73
>gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak33l17 5', mRNA sequence
Length = 689
Score = 158 bits (339), Expect(3) = 1e-060
Identities = 61/121 (50%), Positives = 85/121 (70%)
Frame = +2 / +2
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 326 EIISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 505
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
GRDP+ WE PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N +A +E+ML
Sbjct: 506 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 685
Query: 1481 A 1483
A
Sbjct: 686 A 688
Score = 109 bits (233), Expect(2) = 5e-030
Identities = 54/109 (49%), Positives = 65/109 (59%)
Frame = -1 / -3
Query: 1482 ASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMNSSGFSQTAGSL 1303
A++ S A + PG I RP PNG+ KS+PL L+ + PS +NLSGMNSSG+SQ GSL
Sbjct: 687 ANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMNSSGYSQELGSL 508
Query: 1302 PMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
PMA T TRV AG YPS+ QSA+ S SFM A RY
Sbjct: 507 PMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRY 361
Score = 74.4 bits (156), Expect(3) = 1e-060
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +2 / +2
Query: 899 EKESDDFIDIFLSRYEEYGFTMDNVKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKK 1078
+ + DDF+DI LS +EY T +++K+LL +VF AI+TS VLE +AELM +M+K
Sbjct: 107 DHKDDDFVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEK 286
Query: 1079 LQAEVR 1096
LQ EVR
Sbjct: 287 LQDEVR 304
Score = 42.8 bits (87), Expect(2) = 5e-030
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = -1 / -3
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSMAASNTFMRRDLTLSMVKPYSSYLE 934
TS+CSF + MSSA +S T +VS+A T +RR S+V+ YS + +
Sbjct: 300 TSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYSCWTD 142
Score = 41.4 bits (84), Expect(3) = 1e-060
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2 / +2
Query: 788 LFRLVCWKVTRHLKRWDSLLEEVIHEHVEMRKLSGDKEKE 907
L + VC K R RW LL++VI +HV RKL+ D + +
Sbjct: 2 LKKAVCAKAKRVRNRWADLLDQVIDDHVSKRKLASDHKDD 121
>gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019N18f, mRNA sequence
Length = 925
Score = 90.4 bits (191), Expect(5) = 3e-060
Identities = 37/89 (41%), Positives = 56/89 (62%)
Frame = +2 / +3
Query: 602 AVDMSEVLAAYTNDVVSRSVLGSTHRKKGRNTLFREMTMTNVDLLVGFNLEYYIPRWPLT 781
A+D+ E+L+A++ ++V +V G + R+KG LFRE+ TN L+ GFN+ Y P
Sbjct: 3 ALDLGELLSAFSTNIVGHAVCGKSFRQKGHEKLFRELVETNSLLIGGFNVGDYFPELLKL 182
Query: 782 DLLFRLVCWKVTRHLKRWDSLLEEVIHEH 868
D++ +VC + R K WD LLE +IHEH
Sbjct: 183 DIIRWMVCGRARRVNKMWDDLLESLIHEH 269
Score = 65.7 bits (137), Expect(5) = 3e-060
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = +2 / +3
Query: 905 ESDDFIDIFLSRYEEYGFTMDNVKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKKLQ 1084
+ D+I LS +EY T + VK+ L+ +F A +TSY+V+E AMA LM + +M KLQ
Sbjct: 297 DDTDYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQ 476
Query: 1085 AEVRA 1099
AEVR+
Sbjct: 477 AEVRS 491
Score = 57.9 bits (120), Expect(5) = 3e-060
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = +2 / +3
Query: 1124 MIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLV 1285
M+ EDDL+ L YLKA +KE LR + ADC I+GY IP+ TRV+V
Sbjct: 513 MVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIV 674
Score = 54.2 bits (112), Expect(5) = 3e-060
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = +2 / +3
Query: 1406 YLPFGSGRRICPGANFALATMEIMLANLMYHFDWE 1510
YLPFG+GRR CPG N +A + IML NL Y F E
Sbjct: 798 YLPFGTGRRYCPGINLRIAAIGIMLTNLGYQFPLE 902
Score = 40.0 bits (81), Expect(5) = 3e-060
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2 / +2
Query: 1310 PAVWEKPEEFMPERFMRDGWDKSNSYSGQDF 1402
PA WE EE +PERFM+ G + Y G F
Sbjct: 701 PANWESAEEVLPERFMQGGMAAAMDYKGNGF 793
>gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5k12 3', mRNA sequence
Length = 774
Score = 182 bits (392), Expect(3) = 9e-060
Identities = 69/132 (52%), Positives = 95/132 (71%)
Frame = +2 / -3
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 601 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 422
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
GRDP+ WE PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N +A +E+ML
Sbjct: 421 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 242
Query: 1481 ANLMYHFDWEVP 1516
ANL+ HFDWE+P
Sbjct: 241 ANLVCHFDWELP 206
Score = 128 bits (274), Expect(2) = 2e-035
Identities = 61/120 (50%), Positives = 74/120 (61%)
Frame = -1 / +3
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G+SQSKW+ R A++ S A + PG I RP PNG+ KS+PL L+ + PS +NLSGMN
Sbjct: 207 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 386
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
SSG+SQ GSLPMA T TRV AG YPS+ QSA+ S SFM A RY
Sbjct: 387 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 566
Score = 56.5 bits (117), Expect(3) = 9e-060
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +2 / -3
Query: 947 EYGFTMDNVKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKKLQAEVR 1096
EY T +++K+LL +VF AI+TS VLE +AELM +M+KLQ EVR
Sbjct: 772 EYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVR 623
Score = 41.8 bits (85), Expect(2) = 2e-035
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -1 / +3
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSMAASNTFMRRDLTLSMVKPYS 946
TS+CSF + MSSA +S T +VS+A T +RR S+V+ YS
Sbjct: 627 TSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYS 773
Score = 31.8 bits (63), Expect(3) = 9e-060
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2 / -3
Query: 1532 GGGKVSMDETFGLMLRRNEPLYLVPR 1609
G + M E FGL +RR E L LVP+
Sbjct: 196 GRKDIDMTEVFGLTVRRKEKLLLVPK 119
>gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB105E09_SK.ab1 similar to Steroid
17-alpha-monooxygenase,Unspecific monooxygenase, mRNA
sequence
Length = 884
Score = 177 bits (381), Expect(3) = 3e-059
Identities = 67/132 (50%), Positives = 93/132 (70%)
Frame = +2 / +2
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
+++ E D+S + YL+A +KE+LR + D IDGY +PA T VL+N WAI
Sbjct: 251 EVVTEADISKMTYLRAVIKESLRLHPVAPLLVPHLAMIDGNIDGYMVPAGTHVLINVWAI 430
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
GRD + WE+ EEF+PERF+ +G ++ G DF++LPFG+GRR+CPG N +AT+E+ML
Sbjct: 431 GRDSSYWEEAEEFIPERFLDEGSAAGVNFKGNDFQFLPFGAGRRMCPGINLGIATVELML 610
Query: 1481 ANLMYHFDWEVP 1516
ANLMYHFDWE+P
Sbjct: 611 ANLMYHFDWELP 646
Score = 111 bits (237), Expect(2) = 1e-029
Identities = 56/120 (46%), Positives = 67/120 (55%)
Frame = -1 / -3
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G SQSKWY++ A++ S VA + PG I RP PNG+ KS+PL L + PS NLSGMN
Sbjct: 645 GNSQSKWYIKFANISSTVAIPRFIPGHILRPAPNGKNWKSFPLKLTPAALPSSRNLSGMN 466
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
SS SQ SLPMA +T V AG YPS+ S + S SFM A RY
Sbjct: 465 SSASSQ*LESLPMAHTLIKTCVPAGTMYPSMLPSIIARCGTSKGATG*SRSDSFMTALRY 286
Score = 59.7 bits (124), Expect(3) = 3e-059
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +2 / +2
Query: 899 EKESDDFIDIFLSRYEEYGFTMDNVKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKK 1078
++ +F+DI LS EYG T +++K+LL +VF + ETS LE +AEL+ ++ K
Sbjct: 32 DRTGGNFVDILLSVQMEYGLTKEDMKALLTDVFFGSTETSSNTLEFTLAELVRSPCLIGK 211
Query: 1079 LQAEVRA 1099
LQ EVR+
Sbjct: 212 LQDEVRS 232
Score = 39.6 bits (80), Expect(2) = 1e-029
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -1 / -3
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSMAASNTFMRRDLTLSMVKPYS 946
TS+CSF + SSA +S +VS+ NT +RR S V+PYS
Sbjct: 225 TSSCSFPIKHGLLTSSAKVNSRVLDDVSVEPKNTSVRRAFMSSFVRPYS 79
Score = 31.8 bits (63), Expect(3) = 3e-059
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2 / +2
Query: 1544 VSMDETFGLMLRRNEPLYLVPR 1609
++M E FGL +RR E L LVP+
Sbjct: 668 INMTELFGLTMRRKEKLMLVPK 733
>gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak42e08 5', mRNA sequence
Length = 688
Score = 145 bits (312), Expect(3) = 5e-058
Identities = 56/110 (50%), Positives = 77/110 (70%)
Frame = +2 / +2
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 356 EIISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 535
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGAN 1450
GRDP+ WE PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N
Sbjct: 536 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMN 685
Score = 106 bits (226), Expect(2) = 5e-029
Identities = 51/99 (51%), Positives = 60/99 (60%)
Frame = -1 / -2
Query: 1452 KLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMNSSGFSQTAGSLPMAQPFTRTR 1273
+ PG I RP PNG+ KS+PL L+ + PS +NLSGMNSSG+SQ GSLPMA T TR
Sbjct: 687 RFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMNSSGYSQELGSLPMAHALTTTR 508
Query: 1272 VLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
V AG YPS+ QSA+ S SFM A RY
Sbjct: 507 VPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRY 391
Score = 74.4 bits (156), Expect(3) = 5e-058
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +2 / +2
Query: 899 EKESDDFIDIFLSRYEEYGFTMDNVKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKK 1078
+ + DDF+DI LS +EY T +++K+LL +VF AI+TS VLE +AELM +M+K
Sbjct: 137 DHKDDDFVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEK 316
Query: 1079 LQAEVR 1096
LQ EVR
Sbjct: 317 LQDEVR 334
Score = 44.6 bits (91), Expect(3) = 5e-058
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2 / +2
Query: 758 YIPRWPLTDLLFRLVCWKVTRHLKRWDSLLEEVIHEHVEMRKLSGDKEKE 907
Y P +L + VC K R RW LL++VI +HV RKL+ D + +
Sbjct: 2 YFPALGRVGVLKKAVCAKAKRVRNRWADLLDQVIDDHVSKRKLASDHKDD 151
Score = 42.8 bits (87), Expect(2) = 5e-029
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = -1 / -2
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSMAASNTFMRRDLTLSMVKPYSSYLE 934
TS+CSF + MSSA +S T +VS+A T +RR S+V+ YS + +
Sbjct: 330 TSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYSCWTD 172
>gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 3', mRNA sequence
Length = 746
Score = 185 bits (398), Expect(3) = 3e-057
Identities = 76/138 (55%), Positives = 94/138 (68%)
Frame = +2 / -1
Query: 1124 MIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAIG 1303
M+ EDDL+ L YLKA +KE LR + ADC I+GY IP+ TRV+VN AI
Sbjct: 620 MVIEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIA 441
Query: 1304 RDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIMLA 1483
RDP+ WE EEF+PERFM+ G + Y G F YLPFG+GRRICPG NFA+A +EIMLA
Sbjct: 440 RDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLA 261
Query: 1484 NLMYHFDWEVPNEKEDGG 1537
NL+YHFDW++P + G
Sbjct: 260 NLVYHFDWKLPPGSAERG 207
Score = 110 bits (235), Expect(3) = 5e-029
Identities = 61/126 (48%), Positives = 70/126 (55%)
Frame = -1 / +1
Query: 1536 PPSSFSLGTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSR 1357
P S+ G+ QSKWY RLASMISM A AK PG I RP PNGR K +PL* + + P
Sbjct: 208 PRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL*SMAAALPPC 387
Query: 1356 MNLSGMNSSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSAS 1177
M SG NSS SQ GSL +A+ T TRV GM P + QSA+ S S
Sbjct: 388 MKRSGRNSSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVS 567
Query: 1176 FMDAFR 1159
M AFR
Sbjct: 568 LMTAFR 585
Score = 47.8 bits (98), Expect(3) = 3e-057
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +2 / -1
Query: 995 FEAAIETSYLVLESAMAELMNHRRVMKKLQAEVRAYGAEKKLDMIRED 1138
F A +TSY+V+E AMA LM + +M KLQAEVR+ + K +I +D
Sbjct: 746 FXAGTDTSYIVMEYAMARLMQNPDLMTKLQAEVRSSIPKGKHMVIEDD 603
Score = 34.1 bits (68), Expect(3) = 5e-029
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -1 / +1
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSMAA 1000
TSACS M + MS AMA S T Y+VS+ A
Sbjct: 649 TSACSLVMRSGFCMSRAMAYSITMYDVSVPA 741
Score = 29.0 bits (57), Expect(3) = 3e-057
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2 / -1
Query: 1544 VSMDETFGLMLRRNEPLYLVP 1606
+SM E+FGL + R + L LVP
Sbjct: 206 ISMTESFGLTVHRKDKLLLVP 144
Score = 22.1 bits (42), Expect(3) = 5e-029
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3 / +3
Query: 1180 LLHGRL*VRQAAQVVLPDHV 1121
LL L*V Q ++VL DHV
Sbjct: 564 LLDDGL*VGQMVKIVLYDHV 623
>gb|BE420993.1|BE420993 HWM004.F10 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.F10, mRNA sequence
Length = 1299
Score = 146 bits (314), Expect(2) = 6e-057
Identities = 59/96 (61%), Positives = 75/96 (78%)
Frame = +2 / +2
Query: 302 RAGAVPTLIVSSPSAAEAVMRTHDHIFASRPWSMASHILRYNTCDVAFSPLGEYWQQTRK 481
R A+ TL+VSSPSA +AV+RTHDH+FASRP+S+ S IL Y DVAFSP GE+W+Q RK
Sbjct: 86 RNSALATLVVSSPSAGQAVLRTHDHVFASRPYSLVSEILFYGPSDVAFSPYGEHWRQVRK 265
Query: 482 LMNTHLLSNKKVYSFRHGREEEVCLVVDNLREAAAK 589
+ THLL+NKKV S+RH RE +V LVV +R+ A+K
Sbjct: 266 IATTHLLTNKKVRSYRHAREHDVRLVVAKIRDVASK 373
Score = 95.9 bits (203), Expect(2) = 6e-057
Identities = 42/93 (45%), Positives = 56/93 (60%)
Frame = +2 / +2
Query: 590 SPSTAVDMSEVLAAYTNDVVSRSVLGSTHRKKGRNTLFREMTMTNVDLLVGFNLEYYIPR 769
S TA+DMSE+L A+TND+V +V G ++G N L RE+ N LL GFNL Y PR
Sbjct: 368 SKCTAIDMSELLNAFTNDIVCHAVSGKLFTERGHNKLCRELVEANSLLLGGFNLVDYFPR 547
Query: 770 WPLTDLLFRLVCWKVTRHLKRWDSLLEEVIHEH 868
D++ R+ C K + K WD+LL +I EH
Sbjct: 548 LVQMDIIMRMGCAKAXKVNKMWDNLLNSIIDEH 646
Score = 84.9 bits (179), Expect(3) = 2e-023
Identities = 42/74 (56%), Positives = 48/74 (64%)
Frame = -1 / -1
Query: 531 WRKE*TFLLLSRCVFISFLVCCQYSPSGEKATSQVL*RRMWEAMDHGRDAKMWSWVRITA 352
WR E TFLL+ RCV FL C Q SP G KATS+ *+R+ + GRDAK WS VR TA
Sbjct: 315 WR*ERTFLLVRRCVVAIFLTCRQCSP*GLKATSEGP*KRISLTRE*GRDAKTWSCVRSTA 136
Query: 351 SAALGDDTIRVGTA 310
ALGDDT V +A
Sbjct: 135 CPALGDDTTSVASA 94
Score = 40.0 bits (81), Expect(3) = 2e-023
Identities = 25/77 (32%), Positives = 36/77 (46%)
Frame = -3 / -3
Query: 868 VFVDHLLQQGVPALEVARDLPAHEPEEQVRQRPPRDVVLQVEPHQEVHVGHGHLPEQRVP 689
+FVD ++Q +P L L A P + V P +VV QVE E VG L + V
Sbjct: 646 MFVDDTIEQVIPHLIHFXGLSATHPHDDVHLHQPGEVVHQVESP*EQ*VGLDELSTEFVM 467
Query: 688 AFLPVRRAQHRPAHHVV 638
+ + A H H+V+
Sbjct: 466 SPFRKKLAGHSMTHNVI 416
Score = 23.1 bits (44), Expect(3) = 2e-023
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / -1
Query: 666 PSTDRLTTSLVYAASTSLMSTAV 598
P T T SLV A +SLMS AV
Sbjct: 444 PDTA*HTMSLVKALRSSLMSMAV 376
>gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak33l17 3', mRNA sequence
Length = 689
Score = 182 bits (392), Expect(2) = 4e-056
Identities = 69/132 (52%), Positives = 95/132 (71%)
Frame = +2 / -1
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 515 EIISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 336
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
GRDP+ WE PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N +A +E+ML
Sbjct: 335 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 156
Query: 1481 ANLMYHFDWEVP 1516
ANL+ HFDWE+P
Sbjct: 155 ANLVCHFDWELP 120
Score = 128 bits (275), Expect(2) = 2e-035
Identities = 61/120 (50%), Positives = 74/120 (61%)
Frame = -1 / +1
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G+SQSKW+ R A++ S A + PG I RP PNG+ KS+PL L+ + PS +NLSGMN
Sbjct: 121 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 300
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
SSG+SQ GSLPMA T TRV AG YPS+ QSA+ S SFM A RY
Sbjct: 301 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRY 480
Score = 57.4 bits (119), Expect(2) = 4e-056
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2 / -1
Query: 944 EEYGFTMDNVKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKKLQAEVR 1096
+EY T +++K+LL +VF AI+TS VLE +AELM +M+KLQ EVR
Sbjct: 689 QEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVR 537
Score = 41.8 bits (85), Expect(2) = 2e-035
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = -1 / +1
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSMAASNTFMRRDLTLSMVKPYS 946
TS+CSF + MSSA +S T +VS+A T +RR S+V+ YS
Sbjct: 541 TSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYS 687
>gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m23 5', mRNA sequence
Length = 660
Score = 194 bits (418), Expect(3) = 7e-055
Identities = 78/142 (54%), Positives = 95/142 (66%)
Frame = +2 / +2
Query: 1112 KKLDMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNG 1291
K D + +DDL LPYLKA +KE LR S +C I+GY IP+ TR +N
Sbjct: 119 KGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINT 298
Query: 1292 WAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATME 1471
+AI RDP+ WE PEEFMPERFM G + Y G DF+Y PFGSGRRICPG NFA AT++
Sbjct: 299 YAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQ 478
Query: 1472 IMLANLMYHFDWEVPNEKEDGG 1537
+ML NLMYHFDW++P E E+ G
Sbjct: 479 LMLTNLMYHFDWKLPPESEEEG 544
Score = 121 bits (259), Expect(2) = 1e-030
Identities = 67/147 (45%), Positives = 83/147 (56%)
Frame = -1 / -1
Query: 1593 SGSFLRSISPNVSSMLTFPPPSSFSLGTSQSKWYMRLASMISMVASAKLAPGQIRRPDPN 1414
S SF + + + + F P SS S G+ QSKWYMR SM MVA AKL PG I RPDPN
Sbjct: 600 SRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPN 421
Query: 1413 GRYLKSWPL*LLDLSQPSRMNLSGMNSSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQS 1234
G+Y KS+PL* + + P MN SGMNSSG SQ GSL +A + RV G+ P + S
Sbjct: 420 GKYWKSFPL*SMAAALPPSMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHS 241
Query: 1233 AVEXXXXXXXXXXXXXSASFMDAFRYG 1153
++E S S + AFR G
Sbjct: 240 SMERWGTMSGPGM*SRSVSLITAFR*G 160
Score = 33.1 bits (66), Expect(2) = 1e-030
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -1 / -1
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSMAAS 997
TSACS MTR + +S MA SSTR + AS
Sbjct: 102 TSACSMAMTRGFCISRTMAYSSTRXMCXVPAS 7
Score = 30.9 bits (61), Expect(3) = 7e-055
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2 / +2
Query: 1544 VSMDETFGLMLRRNEPLYLVP 1606
++M ETFGL + R E L LVP
Sbjct: 545 INMTETFGLTVHRKEKLLLVP 607
Score = 29.0 bits (57), Expect(3) = 7e-055
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1 / +1
Query: 997 RGSHRDLISGAGVRHGRAHEPQARHEEAASGG 1092
RG H G+RHG A RH A S G
Sbjct: 7 RGWHGTHXPSTGIRHGSADAEPPRHGHATSRG 102
>gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34j09 3', mRNA sequence
Length = 719
Score = 194 bits (418), Expect(3) = 3e-054
Identities = 78/142 (54%), Positives = 95/142 (66%)
Frame = +2 / -3
Query: 1112 KKLDMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNG 1291
K D + +DDL LPYLKA +KE LR S +C I+GY IP+ TR +N
Sbjct: 582 KGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINT 403
Query: 1292 WAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATME 1471
+AI RDP+ WE PEEFMPERFM G + Y G DF+Y PFGSGRRICPG NFA AT++
Sbjct: 402 YAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQ 223
Query: 1472 IMLANLMYHFDWEVPNEKEDGG 1537
+ML NLMYHFDW++P E E+ G
Sbjct: 222 LMLTNLMYHFDWKLPPESEEEG 157
Score = 121 bits (259), Expect(2) = 2e-032
Identities = 67/147 (45%), Positives = 83/147 (56%)
Frame = -1 / +2
Query: 1593 SGSFLRSISPNVSSMLTFPPPSSFSLGTSQSKWYMRLASMISMVASAKLAPGQIRRPDPN 1414
S SF + + + + F P SS S G+ QSKWYMR SM MVA AKL PG I RPDPN
Sbjct: 101 SRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPN 280
Query: 1413 GRYLKSWPL*LLDLSQPSRMNLSGMNSSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQS 1234
G+Y KS+PL* + + P MN SGMNSSG SQ GSL +A + RV G+ P + S
Sbjct: 281 GKYWKSFPL*SMAAALPPSMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHS 460
Query: 1233 AVEXXXXXXXXXXXXXSASFMDAFRYG 1153
++E S S + AFR G
Sbjct: 461 SMERWGTMSGPGM*SRSVSLITAFR*G 541
Score = 39.1 bits (79), Expect(2) = 2e-032
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = -1 / +2
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSMAASN 994
TSACS MTR + +S MA SST +VS+ ASN
Sbjct: 599 TSACSMAMTRGFCISRTMAYSSTMVDVSVPASN 697
Score = 30.9 bits (61), Expect(3) = 3e-054
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2 / -3
Query: 1544 VSMDETFGLMLRRNEPLYLVP 1606
++M ETFGL + R E L LVP
Sbjct: 156 INMTETFGLTVHRKEKLLLVP 94
Score = 26.7 bits (52), Expect(3) = 3e-054
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1 / -2
Query: 1006 HRDLISGAGVRHGRAHEPQARHEEAASGG 1092
H + G+RHG A RH A S G
Sbjct: 685 HGHINHSTGIRHGSADAEPPRHGHATSRG 599
>gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 3', mRNA sequence
Length = 703
Score = 194 bits (418), Expect(3) = 3e-054
Identities = 78/142 (54%), Positives = 95/142 (66%)
Frame = +2 / -2
Query: 1112 KKLDMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNG 1291
K D + +DDL LPYLKA +KE LR S +C I+GY IP+ TR +N
Sbjct: 600 KGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINT 421
Query: 1292 WAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATME 1471
+AI RDP+ WE PEEFMPERFM G + Y G DF+Y PFGSGRRICPG NFA AT++
Sbjct: 420 YAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQ 241
Query: 1472 IMLANLMYHFDWEVPNEKEDGG 1537
+ML NLMYHFDW++P E E+ G
Sbjct: 240 LMLTNLMYHFDWKLPPESEEEG 175
Score = 121 bits (259), Expect(2) = 1e-030
Identities = 67/147 (45%), Positives = 83/147 (56%)
Frame = -1 / +2
Query: 1593 SGSFLRSISPNVSSMLTFPPPSSFSLGTSQSKWYMRLASMISMVASAKLAPGQIRRPDPN 1414
S SF + + + + F P SS S G+ QSKWYMR SM MVA AKL PG I RPDPN
Sbjct: 119 SRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPN 298
Query: 1413 GRYLKSWPL*LLDLSQPSRMNLSGMNSSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQS 1234
G+Y KS+PL* + + P MN SGMNSSG SQ GSL +A + RV G+ P + S
Sbjct: 299 GKYWKSFPL*SMAAALPPSMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHS 478
Query: 1233 AVEXXXXXXXXXXXXXSASFMDAFRYG 1153
++E S S + AFR G
Sbjct: 479 SMERWGTMSGPGM*SRSVSLITAFR*G 559
Score = 33.1 bits (66), Expect(2) = 1e-030
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1 / +2
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSM 1006
TSACS MTR + +S MA SST +VS+
Sbjct: 617 TSACSMAMTRGFCISRTMAYSSTMVDVSV 703
Score = 30.9 bits (61), Expect(3) = 3e-054
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2 / -2
Query: 1544 VSMDETFGLMLRRNEPLYLVP 1606
++M ETFGL + R E L LVP
Sbjct: 174 INMTETFGLTVHRKEKLLLVP 112
Score = 26.7 bits (52), Expect(3) = 3e-054
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1 / -1
Query: 1006 HRDLISGAGVRHGRAHEPQARHEEAASGG 1092
H + G+RHG A RH A S G
Sbjct: 703 HGHINHSTGIRHGSADAEPPRHGHATSRG 617
>gb|BG301073.1|BG301073 HVSMEb0019H09f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019H09f, mRNA sequence
Length = 578
Score = 179 bits (386), Expect(2) = 5e-054
Identities = 65/124 (52%), Positives = 96/124 (77%)
Frame = +2 / +3
Query: 209 IVGHLHHIGPQTHISLQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHIFAS 388
++GHLH +GP H+SL+ L A++G +G + +R GAVPTL+VS+P+AA+AV+RTHDH+FA
Sbjct: 42 VIGHLHQVGPLPHVSLRHLAAEHGRDGLMLVRLGAVPTLVVSTPAAAQAVLRTHDHVFAX 221
Query: 389 RPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEVCLVVDN 568
RP S +HIL Y + DV F+P G +W+Q +K+ THLL+ +KV+S+RH R+ EV LV+
Sbjct: 222 RPHSPVAHILFYGSADVVFAPYGHHWRQVKKISTTHLLTARKVHSYRHARQHEVNLVLAK 401
Query: 569 LREA 580
+R+A
Sbjct: 402 VRDA 413
Score = 53.3 bits (110), Expect(2) = 5e-054
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2 / +3
Query: 584 AKSPSTAVDMSEVLAAYTNDVVSRSVLGSTHRKKGRNTLFREMTMTNVDLLVGFNL 751
A A+DMSE+L A+ D+V + G++ R++G N FRE+ N L+ GFNL
Sbjct: 411 AMRAGVALDMSELLNAFVFDIVCHAGAGNSFRERGLNKHFRELVEANASLIGGFNL 578
>gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 3', mRNA sequence
Length = 683
Score = 182 bits (392), Expect(3) = 1e-053
Identities = 69/132 (52%), Positives = 95/132 (71%)
Frame = +2 / -2
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 571 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 392
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
GRDP+ WE PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N +A +E+ML
Sbjct: 391 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 212
Query: 1481 ANLMYHFDWEVP 1516
ANL+ HFDWE+P
Sbjct: 211 ANLVCHFDWELP 176
Score = 128 bits (274), Expect(2) = 1e-030
Identities = 61/120 (50%), Positives = 74/120 (61%)
Frame = -1 / +3
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G+SQSKW+ R A++ S A + PG I RP PNG+ KS+PL L+ + PS +NLSGMN
Sbjct: 177 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 356
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
SSG+SQ GSLPMA T TRV AG YPS+ QSA+ S SFM A RY
Sbjct: 357 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 536
Score = 35.9 bits (72), Expect(3) = 1e-053
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2 / -2
Query: 1007 IETSYLVLESAMAELMNHRRVMKKLQAEVR 1096
I+TS VLE +AELM +M+KLQ EVR
Sbjct: 682 IDTSANVLEFTLAELMRRPHMMEKLQDEVR 593
Score = 31.8 bits (63), Expect(3) = 1e-053
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2 / -2
Query: 1532 GGGKVSMDETFGLMLRRNEPLYLVPR 1609
G + M E FGL +RR E L LVP+
Sbjct: 166 GRKDIDMTEVFGLTVRRKEKLLLVPK 89
Score = 25.8 bits (50), Expect(2) = 1e-030
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / +3
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSM 1006
TS+CSF + MSSA +S T +VS+
Sbjct: 597 TSSCSFSIMCGLLMSSAKVNSRTLADVSI 683
>gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15n22 3', mRNA sequence
Length = 684
Score = 182 bits (392), Expect(3) = 6e-053
Identities = 69/132 (52%), Positives = 95/132 (71%)
Frame = +2 / -3
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 571 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 392
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
GRDP+ WE PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N +A +E+ML
Sbjct: 391 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 212
Query: 1481 ANLMYHFDWEVP 1516
ANL+ HFDWE+P
Sbjct: 211 ANLVCHFDWELP 176
Score = 128 bits (274), Expect(2) = 1e-030
Identities = 61/120 (50%), Positives = 74/120 (61%)
Frame = -1 / +3
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G+SQSKW+ R A++ S A + PG I RP PNG+ KS+PL L+ + PS +NLSGMN
Sbjct: 177 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 356
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
SSG+SQ GSLPMA T TRV AG YPS+ QSA+ S SFM A RY
Sbjct: 357 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 536
Score = 33.6 bits (67), Expect(3) = 6e-053
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2 / -3
Query: 1007 IETSYLVLESAMAELMNHRRVMKKLQAEVR 1096
I+TS V E +AELM +M+KLQ EVR
Sbjct: 682 IDTSANVXEFTLAELMRRPHMMEKLQDEVR 593
Score = 31.8 bits (63), Expect(3) = 6e-053
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2 / -3
Query: 1532 GGGKVSMDETFGLMLRRNEPLYLVPR 1609
G + M E FGL +RR E L LVP+
Sbjct: 166 GRKDIDMTEVFGLTVRRKEKLLLVPK 89
Score = 26.3 bits (51), Expect(2) = 1e-030
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1 / +3
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSM 1006
TS+CSF + MSSA +S T +VS+
Sbjct: 597 TSSCSFSIMCGLLMSSAKVNSXTLADVSI 683
>gb|BF261803.3|BF261803 HV_CEa0002E08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0002E08f, mRNA sequence
Length = 850
Score = 115 bits (246), Expect(3) = 1e-052
Identities = 49/88 (55%), Positives = 63/88 (71%)
Frame = +2 / +1
Query: 323 LIVSSPSAAEAVMRTHDHIFASRPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLL 502
L+VSSP AAEAV+RT DH+FASRP + L D+AF P GE+W+Q R+L+ THLL
Sbjct: 13 LVVSSPRAAEAVLRTQDHVFASRPTNAVVDALLDGGADIAFVPYGEFWRQARRLVTTHLL 192
Query: 503 SNKKVYSFRHGREEEVCLVVDNLREAAA 586
S +KV+S R GREEE LV+ ++ AAA
Sbjct: 193 SARKVHSLRRGREEEARLVMAKIQGAAA 276
Score = 95.9 bits (203), Expect(3) = 1e-052
Identities = 43/110 (39%), Positives = 64/110 (58%)
Frame = +2 / +1
Query: 584 AKSPSTAVDMSEVLAAYTNDVVSRSVLGSTHRKKGRNTLFREMTMTNVDLLVGFNLEYYI 763
A + VDM+ +L A+TND+V R+V G R++GRN LFRE+ NV GFNL Y
Sbjct: 268 AAAAGATVDMTRLLGAFTNDIVCRAVSGKFFREEGRNELFREVIDGNVAAFGGFNLLDYY 447
Query: 764 PRWPLTDLLFRLVCWKVTRHLKRWDSLLEEVIHEHVEMRKLSGDKEKESD 913
P +L RLV K R ++WD LL+++I +HV + ++ ++ D
Sbjct: 448 PGLAKVSMLRRLVFAKTNRLKRKWDDLLDKIIVDHVSQKASPREQHRDRD 597
Score = 74.8 bits (157), Expect(3) = 1e-028
Identities = 39/71 (54%), Positives = 43/71 (60%)
Frame = -1 / -3
Query: 534 PWRKE*TFLLLSRCVFISFLVCCQYSPSGEKATSQVL*RRMWEAMDHGRDAKMWSWVRIT 355
P R+E TFL LSRCV S L C Q SP G KA S RR GR+AK WS VR T
Sbjct: 224 PRRRECTFLALSRCVVTSLLACRQNSP*GTKAMSAPPSRRASTTAFVGREAKTWSCVRRT 45
Query: 354 ASAALGDDTIR 322
ASAA G++T R
Sbjct: 44 ASAARGEETTR 12
Score = 62.5 bits (130), Expect(3) = 1e-028
Identities = 34/79 (43%), Positives = 40/79 (50%)
Frame = -3 / -2
Query: 871 DVFVDHLLQQGVPALEVARDLPAHEPEEQVRQRPPRDVVLQVEPHQEVHVGHGHLPEQRV 692
D+ D L++Q VP L H+ E R VV QVEP + HV LPEQ V
Sbjct: 555 DMIDDDLIEQVVPFPLQPVGLGKHQSPEHAHLGQARVVVQQVEPAKRGHVPVDDLPEQLV 376
Query: 691 PAFLPVRRAQHRPAHHVVG 635
PAFLP H AH+VVG
Sbjct: 375 PAFLPEELPGHGAAHYVVG 319
Score = 35.0 bits (70), Expect(3) = 1e-052
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2 / +3
Query: 971 VKSLLMNVFEAAIETSYLVLESAMAELMNHRR 1066
+++LLM + ET Y+VLE AMAELM R
Sbjct: 681 LRALLMGLVLGGTETLYIVLECAMAELMPKAR 776
Score = 28.1 bits (55), Expect(3) = 1e-028
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1 / -1
Query: 1065 RLWFMSSAMADSSTRYEVSMAASNTFMRRDLTL 967
R + MSSAMA S T Y+VS+ + + R L +
Sbjct: 775 RAFGMSSAMAHSRTMYKVSVPPKTSPINRALKM 677
>gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 5', mRNA sequence
Length = 606
Score = 159 bits (341), Expect(2) = 4e-052
Identities = 67/122 (54%), Positives = 81/122 (66%)
Frame = +2 / +3
Query: 1124 MIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAIG 1303
M+ EDDL+ L YLKA +KE LR + ADC I+GY IP+ TRV+VN AI
Sbjct: 237 MVIEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIA 416
Query: 1304 RDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIMLA 1483
RDP+ WE EEF+PERFM+ G + Y G F YLPFG+GRRICPG NF +A +EIML
Sbjct: 417 RDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFXIAXIEIMLX 596
Query: 1484 NL 1489
NL
Sbjct: 597 NL 602
Score = 89.5 bits (189), Expect(3) = 3e-026
Identities = 51/110 (46%), Positives = 58/110 (52%)
Frame = -1 / -3
Query: 1488 RLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMNSSGFSQTAG 1309
RL SMISM A K PG I RP PNGR K +PL* + + P M SG NSS SQ G
Sbjct: 601 RLXSMISMXAMXKFXPGHILRPVPNGR*RKPFPL*SMAAALPPCMKRSGRNSSALSQLLG 422
Query: 1308 SLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFR 1159
SL +A+ T TRV GM P + QSA+ S S M AFR
Sbjct: 421 SLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVSLMTAFR 272
Score = 67.5 bits (141), Expect(2) = 4e-052
Identities = 33/78 (42%), Positives = 49/78 (62%)
Frame = +2 / +3
Query: 905 ESDDFIDIFLSRYEEYGFTMDNVKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKKLQ 1084
+ D+I LS +EY T + VK+ L+ +F A +TSY+V+E AMA LM + +M KLQ
Sbjct: 21 DDTDYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQ 200
Query: 1085 AEVRAYGAEKKLDMIRED 1138
AEVR+ + K +I +D
Sbjct: 201 AEVRSSIPKGKHMVIEDD 254
Score = 46.0 bits (94), Expect(3) = 3e-026
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = -1 / -3
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSMAASNTFMRRDLTLSMVKPYSSYLE 934
TSACS M + MS AMA S T Y+VS+ A N LT S+V+ YS +E
Sbjct: 208 TSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTCSLVRLYSF*IE 50
Score = 22.1 bits (42), Expect(3) = 3e-026
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3 / -2
Query: 1180 LLHGRL*VRQAAQVVLPDHV 1121
LL L*V Q ++VL DHV
Sbjct: 293 LLDDGL*VGQMVKIVLYDHV 234
>gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20j07 3', mRNA sequence
Length = 660
Score = 194 bits (418), Expect(2) = 1e-051
Identities = 78/142 (54%), Positives = 95/142 (66%)
Frame = +2 / -3
Query: 1112 KKLDMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNG 1291
K D + +DDL LPYLKA +KE LR S +C I+GY IP+ TR +N
Sbjct: 583 KGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINT 404
Query: 1292 WAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATME 1471
+AI RDP+ WE PEEFMPERFM G + Y G DF+Y PFGSGRRICPG NFA AT++
Sbjct: 403 YAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQ 224
Query: 1472 IMLANLMYHFDWEVPNEKEDGG 1537
+ML NLMYHFDW++P E E+ G
Sbjct: 223 LMLTNLMYHFDWKLPPESEEEG 158
Score = 121 bits (259), Expect(2) = 4e-028
Identities = 67/147 (45%), Positives = 83/147 (56%)
Frame = -1 / +3
Query: 1593 SGSFLRSISPNVSSMLTFPPPSSFSLGTSQSKWYMRLASMISMVASAKLAPGQIRRPDPN 1414
S SF + + + + F P SS S G+ QSKWYMR SM MVA AKL PG I RPDPN
Sbjct: 102 SRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPN 281
Query: 1413 GRYLKSWPL*LLDLSQPSRMNLSGMNSSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQS 1234
G+Y KS+PL* + + P MN SGMNSSG SQ GSL +A + RV G+ P + S
Sbjct: 282 GKYWKSFPL*SMAAALPPSMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHS 461
Query: 1233 AVEXXXXXXXXXXXXXSASFMDAFRYG 1153
++E S S + AFR G
Sbjct: 462 SMERWGTMSGPGM*SRSVSLITAFR*G 542
Score = 30.9 bits (61), Expect(2) = 1e-051
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2 / -3
Query: 1544 VSMDETFGLMLRRNEPLYLVP 1606
++M ETFGL + R E L LVP
Sbjct: 157 INMTETFGLTVHRKEKLLLVP 95
Score = 24.4 bits (47), Expect(2) = 4e-028
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1 / +3
Query: 1092 TSACSFFMTRLWFMSSAMA 1036
TSACS MTR + +S MA
Sbjct: 600 TSACSMAMTRGFCISRTMA 656
>gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 3', mRNA sequence
Length = 655
Score = 194 bits (418), Expect(2) = 1e-051
Identities = 78/142 (54%), Positives = 95/142 (66%)
Frame = +2 / -2
Query: 1112 KKLDMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNG 1291
K D + +DDL LPYLKA +KE LR S +C I+GY IP+ TR +N
Sbjct: 618 KGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINT 439
Query: 1292 WAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATME 1471
+AI RDP+ WE PEEFMPERFM G + Y G DF+Y PFGSGRRICPG NFA AT++
Sbjct: 438 YAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQ 259
Query: 1472 IMLANLMYHFDWEVPNEKEDGG 1537
+ML NLMYHFDW++P E E+ G
Sbjct: 258 LMLTNLMYHFDWKLPPESEEEG 193
Score = 121 bits (259), Expect = 1e-026
Identities = 67/147 (45%), Positives = 83/147 (56%)
Frame = -1 / +2
Query: 1593 SGSFLRSISPNVSSMLTFPPPSSFSLGTSQSKWYMRLASMISMVASAKLAPGQIRRPDPN 1414
S SF + + + + F P SS S G+ QSKWYMR SM MVA AKL PG I RPDPN
Sbjct: 137 SRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPN 316
Query: 1413 GRYLKSWPL*LLDLSQPSRMNLSGMNSSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQS 1234
G+Y KS+PL* + + P MN SGMNSSG SQ GSL +A + RV G+ P + S
Sbjct: 317 GKYWKSFPL*SMAAALPPSMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHS 496
Query: 1233 AVEXXXXXXXXXXXXXSASFMDAFRYG 1153
++E S S + AFR G
Sbjct: 497 SMERWGTMSGPGM*SRSVSLITAFR*G 577
Score = 30.9 bits (61), Expect(2) = 1e-051
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2 / -2
Query: 1544 VSMDETFGLMLRRNEPLYLVP 1606
++M ETFGL + R E L LVP
Sbjct: 192 INMTETFGLTVHRKEKLLLVP 130
>gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd22h15 3', mRNA sequence
Length = 640
Score = 182 bits (392), Expect(2) = 1e-051
Identities = 69/132 (52%), Positives = 95/132 (71%)
Frame = +2 / -1
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 505 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 326
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
GRDP+ WE PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N +A +E+ML
Sbjct: 325 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 146
Query: 1481 ANLMYHFDWEVP 1516
ANL+ HFDWE+P
Sbjct: 145 ANLVCHFDWELP 110
Score = 128 bits (274), Expect(2) = 1e-031
Identities = 61/120 (50%), Positives = 74/120 (61%)
Frame = -1 / +3
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G+SQSKW+ R A++ S A + PG I RP PNG+ KS+PL L+ + PS +NLSGMN
Sbjct: 111 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 290
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
SSG+SQ GSLPMA T TRV AG YPS+ QSA+ S SFM A RY
Sbjct: 291 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 470
Score = 42.8 bits (87), Expect(2) = 1e-051
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +2 / -1
Query: 983 LMNVFEAAIETSYLVLESAMAELMNHRRVMKKLQAEVR 1096
L +VF AI+TS VLE +AELM +M+KLQ EVR
Sbjct: 640 LTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVR 527
Score = 29.5 bits (58), Expect(2) = 1e-031
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -1 / +3
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSMAASNT 991
TS+CSF + MSSA +S T +VS+A T
Sbjct: 531 TSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKT 632
>gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18b09 3', mRNA sequence
Length = 618
Score = 193 bits (417), Expect(2) = 1e-051
Identities = 77/139 (55%), Positives = 94/139 (67%)
Frame = +2 / -3
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
D + +DDL LPYLKA +KE LR S +C I+GY IP+ TR +N +AI
Sbjct: 610 DTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAI 431
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
RDP+ WE PEEFMPERFM G + Y G DF+Y PFGSGRRICPG NFA AT+++ML
Sbjct: 430 QRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQLML 251
Query: 1481 ANLMYHFDWEVPNEKEDGG 1537
NLMYHFDW++P E E+ G
Sbjct: 250 TNLMYHFDWKLPPESEEEG 194
Score = 121 bits (259), Expect = 1e-026
Identities = 67/147 (45%), Positives = 83/147 (56%)
Frame = -1 / +3
Query: 1593 SGSFLRSISPNVSSMLTFPPPSSFSLGTSQSKWYMRLASMISMVASAKLAPGQIRRPDPN 1414
S SF + + + + F P SS S G+ QSKWYMR SM MVA AKL PG I RPDPN
Sbjct: 138 SRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPN 317
Query: 1413 GRYLKSWPL*LLDLSQPSRMNLSGMNSSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQS 1234
G+Y KS+PL* + + P MN SGMNSSG SQ GSL +A + RV G+ P + S
Sbjct: 318 GKYWKSFPL*SMAAALPPSMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGIV*PFMMHS 497
Query: 1233 AVEXXXXXXXXXXXXXSASFMDAFRYG 1153
++E S S + AFR G
Sbjct: 498 SMERWGTMSGPGM*SRSVSLITAFR*G 578
Score = 30.9 bits (61), Expect(2) = 1e-051
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2 / -3
Query: 1544 VSMDETFGLMLRRNEPLYLVP 1606
++M ETFGL + R E L LVP
Sbjct: 193 INMTETFGLTVHRKEKLLLVP 131
>gb|BQ471556.1|BQ471556 HV02M13r HV Hordeum vulgare subsp. vulgare cDNA clone HV02M13
5-PRIME, mRNA sequence
Length = 652
Score = 114 bits (244), Expect(3) = 2e-051
Identities = 43/79 (54%), Positives = 61/79 (77%)
Frame = +2 / +2
Query: 344 AAEAVMRTHDHIFASRPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYS 523
AA+AV+RTHDH+FASRP S +HIL Y + DV F+P G +W+Q +K+ THLL+ +KV+S
Sbjct: 11 AAQAVLRTHDHVFASRPHSPVAHILFYGSADVVFAPYGHHWRQVKKISTTHLLTARKVHS 190
Query: 524 FRHGREEEVCLVVDNLREA 580
+RH R+ EV LV+ +R+A
Sbjct: 191 YRHARQHEVNLVLAKVRDA 247
Score = 90.0 bits (190), Expect(3) = 2e-051
Identities = 39/106 (36%), Positives = 60/106 (56%)
Frame = +2 / +2
Query: 584 AKSPSTAVDMSEVLAAYTNDVVSRSVLGSTHRKKGRNTLFREMTMTNVDLLVGFNLEYYI 763
A A+DMSE+L A+ D+V +V G++ R++G N FRE+ N L+ GFNLE +
Sbjct: 245 AMRAGVALDMSELLNAFVFDIVCHAVAGNSFRERGLNKHFRELVEANASLIGGFNLEDHF 424
Query: 764 PRWPLTDLLFRLVCWKVTRHLKRWDSLLEEVIHEHVEMRKLSGDKE 901
P ++ ++VC K R +WD LL+ +I EH L D++
Sbjct: 425 PALVKLEIFRKIVCAKARRVNNKWDDLLDRLIDEHATPPALDEDRD 562
Score = 37.7 bits (76), Expect(3) = 2e-051
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2 / +2
Query: 905 ESDDFIDIFLSRYEEYGFTMDNVKSLLMNVFEA 1003
E DFI + LS +EY T D++K+ L+ +FEA
Sbjct: 551 EDRDFIHVLLSVQQEYNLTRDHIKAQLLIMFEA 649
>gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. vulgare cDNA clone HB08M23
5-PRIME, mRNA sequence
Length = 624
Score = 158 bits (339), Expect(2) = 2e-051
Identities = 67/121 (55%), Positives = 81/121 (66%)
Frame = +2 / +2
Query: 1124 MIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAIG 1303
M+ EDDL+ L YLKA +KE LR + ADC I+GY IP+ TRV+VN AI
Sbjct: 260 MVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCIINGYTIPSGTRVIVNSRAIA 439
Query: 1304 RDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIMLA 1483
RDP+ WE EEF+PERFM+ G + Y G F YLPFG+ RRICPG NFA+A +EIMLA
Sbjct: 440 RDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYLPFGTXRRICPGINFAIAAIEIMLA 619
Query: 1484 N 1486
N
Sbjct: 620 N 622
Score = 87.7 bits (185), Expect(2) = 2e-024
Identities = 51/110 (46%), Positives = 59/110 (53%)
Frame = -1 / -1
Query: 1488 RLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMNSSGFSQTAG 1309
RLASMISM A AK PG I R PNGR K +PL* + + P M SG NSS SQ G
Sbjct: 624 RLASMISMAAMAKFIPGHILRXVPNGR*RKPFPL*SMAAALPPCMKRSGRNSSALSQLLG 445
Query: 1308 SLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFR 1159
SL +A+ T TRV GM P + QSA+ S S + AFR
Sbjct: 444 SLAIARLLTMTRVPDGMV*PFMMQSAMARWGTRSGAGM*SRSVSLITAFR 295
Score = 65.7 bits (137), Expect(2) = 2e-051
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = +2 / +2
Query: 905 ESDDFIDIFLSRYEEYGFTMDNVKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKKLQ 1084
+ D+I LS +EY T + VK+ L+ +F A +TSY+V+E AMA LM + +M KLQ
Sbjct: 44 DDTDYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQ 223
Query: 1085 AEVRA 1099
AEVR+
Sbjct: 224 AEVRS 238
Score = 46.0 bits (94), Expect(2) = 2e-024
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = -1 / -1
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSMAASNTFMRRDLTLSMVKPYSSYLE 934
TSACS M + MS AMA S T Y+VS+ A N LT S+V+ YS +E
Sbjct: 231 TSACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTCSLVRLYSF*IE 73
>gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11k15 3', mRNA sequence
Length = 707
Score = 182 bits (392), Expect(3) = 3e-051
Identities = 69/132 (52%), Positives = 95/132 (71%)
Frame = +2 / -2
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 592 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 413
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
GRDP+ WE PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N +A +E+ML
Sbjct: 412 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 233
Query: 1481 ANLMYHFDWEVP 1516
ANL+ HFDWE+P
Sbjct: 232 ANLVCHFDWELP 197
Score = 128 bits (274), Expect = 1e-028
Identities = 61/120 (50%), Positives = 74/120 (61%)
Frame = -1 / +3
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G+SQSKW+ R A++ S A + PG I RP PNG+ KS+PL L+ + PS +NLSGMN
Sbjct: 198 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 377
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
SSG+SQ GSLPMA T TRV AG YPS+ QSA+ S SFM A RY
Sbjct: 378 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 557
Score = 31.8 bits (63), Expect(3) = 3e-051
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2 / -2
Query: 1532 GGGKVSMDETFGLMLRRNEPLYLVPR 1609
G + M E FGL +RR E L LVP+
Sbjct: 187 GRKDIDMTEVFGLTVRRKEKLLLVPK 110
Score = 27.6 bits (54), Expect(3) = 3e-051
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2 / -2
Query: 1031 ESAMAELMNHRRVMKKLQAEVR 1096
E +AELM +M+KLQ EVR
Sbjct: 679 EFTLAELMRRPHMMEKLQDEVR 614
>gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40l11 3', mRNA sequence
Length = 696
Score = 182 bits (392), Expect(3) = 1e-050
Identities = 69/132 (52%), Positives = 95/132 (71%)
Frame = +2 / -1
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 585 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 406
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
GRDP+ WE PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N +A +E+ML
Sbjct: 405 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 226
Query: 1481 ANLMYHFDWEVP 1516
ANL+ HFDWE+P
Sbjct: 225 ANLVCHFDWELP 190
Score = 128 bits (274), Expect = 1e-028
Identities = 61/120 (50%), Positives = 74/120 (61%)
Frame = -1 / +2
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G+SQSKW+ R A++ S A + PG I RP PNG+ KS+PL L+ + PS +NLSGMN
Sbjct: 191 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 370
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
SSG+SQ GSLPMA T TRV AG YPS+ QSA+ S SFM A RY
Sbjct: 371 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 550
Score = 31.8 bits (63), Expect(3) = 1e-050
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2 / -1
Query: 1532 GGGKVSMDETFGLMLRRNEPLYLVPR 1609
G + M E FGL +RR E L LVP+
Sbjct: 180 GRKDIDMTEVFGLTVRRKEKLLLVPK 103
Score = 25.8 bits (50), Expect(3) = 1e-050
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2 / -2
Query: 1007 IETSYLVLESAMAELMNHRRVMK 1075
I+TS VLE +AELM +MK
Sbjct: 695 IDTSANVLEFTLAELMRRPHMMK 627
>gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16j19 3', mRNA sequence
Length = 669
Score = 182 bits (392), Expect(3) = 2e-050
Identities = 69/132 (52%), Positives = 95/132 (71%)
Frame = +2 / -2
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 593 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 414
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
GRDP+ WE PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N +A +E+ML
Sbjct: 413 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 234
Query: 1481 ANLMYHFDWEVP 1516
ANL+ HFDWE+P
Sbjct: 233 ANLVCHFDWELP 198
Score = 128 bits (274), Expect = 1e-028
Identities = 61/120 (50%), Positives = 74/120 (61%)
Frame = -1 / +1
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G+SQSKW+ R A++ S A + PG I RP PNG+ KS+PL L+ + PS +NLSGMN
Sbjct: 199 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 378
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
SSG+SQ GSLPMA T TRV AG YPS+ QSA+ S SFM A RY
Sbjct: 379 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 558
Score = 31.8 bits (63), Expect(3) = 2e-050
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2 / -2
Query: 1532 GGGKVSMDETFGLMLRRNEPLYLVPR 1609
G + M E FGL +RR E L LVP+
Sbjct: 188 GRKDIDMTEVFGLTVRRKEKLLLVPK 111
Score = 25.4 bits (49), Expect(3) = 2e-050
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2 / -2
Query: 1043 AELMNHRRVMKKLQAEVR 1096
AELM +M+KLQ EVR
Sbjct: 668 AELMRRPHMMEKLQDEVR 615
>gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 3', mRNA sequence
Length = 668
Score = 182 bits (392), Expect(3) = 2e-050
Identities = 69/132 (52%), Positives = 95/132 (71%)
Frame = +2 / -1
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 593 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 414
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
GRDP+ WE PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N +A +E+ML
Sbjct: 413 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 234
Query: 1481 ANLMYHFDWEVP 1516
ANL+ HFDWE+P
Sbjct: 233 ANLVCHFDWELP 198
Score = 128 bits (274), Expect = 1e-028
Identities = 61/120 (50%), Positives = 74/120 (61%)
Frame = -1 / +1
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G+SQSKW+ R A++ S A + PG I RP PNG+ KS+PL L+ + PS +NLSGMN
Sbjct: 199 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 378
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
SSG+SQ GSLPMA T TRV AG YPS+ QSA+ S SFM A RY
Sbjct: 379 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 558
Score = 31.8 bits (63), Expect(3) = 2e-050
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2 / -1
Query: 1532 GGGKVSMDETFGLMLRRNEPLYLVPR 1609
G + M E FGL +RR E L LVP+
Sbjct: 188 GRKDIDMTEVFGLTVRRKEKLLLVPK 111
Score = 25.4 bits (49), Expect(3) = 2e-050
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2 / -1
Query: 1043 AELMNHRRVMKKLQAEVR 1096
AELM +M+KLQ EVR
Sbjct: 668 AELMRRPHMMEKLQDEVR 615
>gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24a03 3', mRNA sequence
Length = 645
Score = 182 bits (392), Expect(3) = 1e-049
Identities = 69/132 (52%), Positives = 95/132 (71%)
Frame = +2 / -2
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 572 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 393
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
GRDP+ WE PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N +A +E+ML
Sbjct: 392 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 213
Query: 1481 ANLMYHFDWEVP 1516
ANL+ HFDWE+P
Sbjct: 212 ANLVCHFDWELP 177
Score = 128 bits (274), Expect = 1e-028
Identities = 61/120 (50%), Positives = 74/120 (61%)
Frame = -1 / +1
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G+SQSKW+ R A++ S A + PG I RP PNG+ KS+PL L+ + PS +NLSGMN
Sbjct: 178 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 357
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
SSG+SQ GSLPMA T TRV AG YPS+ QSA+ S SFM A RY
Sbjct: 358 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 537
Score = 31.8 bits (63), Expect(3) = 1e-049
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2 / -2
Query: 1532 GGGKVSMDETFGLMLRRNEPLYLVPR 1609
G + M E FGL +RR E L LVP+
Sbjct: 167 GRKDIDMTEVFGLTVRRKEKLLLVPK 90
Score = 22.6 bits (43), Expect(3) = 1e-049
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2 / -2
Query: 1046 ELMNHRRVMKKLQAEVR 1096
ELM +M KLQ EVR
Sbjct: 644 ELMRRPHMMXKLQDEVR 594
>gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12i23 3', mRNA sequence
Length = 669
Score = 182 bits (392), Expect(2) = 2e-048
Identities = 69/132 (52%), Positives = 95/132 (71%)
Frame = +2 / -3
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 598 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 419
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
GRDP+ WE PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N +A +E+ML
Sbjct: 418 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 239
Query: 1481 ANLMYHFDWEVP 1516
ANL+ HFDWE+P
Sbjct: 238 ANLVCHFDWELP 203
Score = 128 bits (274), Expect = 1e-028
Identities = 61/120 (50%), Positives = 74/120 (61%)
Frame = -1 / +3
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G+SQSKW+ R A++ S A + PG I RP PNG+ KS+PL L+ + PS +NLSGMN
Sbjct: 204 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 383
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
SSG+SQ GSLPMA T TRV AG YPS+ QSA+ S SFM A RY
Sbjct: 384 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 563
Score = 31.8 bits (63), Expect(2) = 2e-048
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2 / -3
Query: 1532 GGGKVSMDETFGLMLRRNEPLYLVPR 1609
G + M E FGL +RR E L LVP+
Sbjct: 193 GRKDIDMTEVFGLTVRRKEKLLLVPK 116
>gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3e02 3', mRNA sequence
Length = 597
Score = 182 bits (392), Expect(2) = 2e-048
Identities = 69/132 (52%), Positives = 95/132 (71%)
Frame = +2 / -3
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 592 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 413
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
GRDP+ WE PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N +A +E+ML
Sbjct: 412 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 233
Query: 1481 ANLMYHFDWEVP 1516
ANL+ HFDWE+P
Sbjct: 232 ANLVCHFDWELP 197
Score = 128 bits (274), Expect = 1e-028
Identities = 61/120 (50%), Positives = 74/120 (61%)
Frame = -1 / +3
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G+SQSKW+ R A++ S A + PG I RP PNG+ KS+PL L+ + PS +NLSGMN
Sbjct: 198 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 377
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
SSG+SQ GSLPMA T TRV AG YPS+ QSA+ S SFM A RY
Sbjct: 378 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 557
Score = 31.8 bits (63), Expect(2) = 2e-048
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2 / -3
Query: 1532 GGGKVSMDETFGLMLRRNEPLYLVPR 1609
G + M E FGL +RR E L LVP+
Sbjct: 187 GRKDIDMTEVFGLTVRRKEKLLLVPK 110
>gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak43p03 5', mRNA sequence
Length = 589
Score = 189 bits (407), Expect(2) = 3e-048
Identities = 75/142 (52%), Positives = 95/142 (66%)
Frame = +2 / +2
Query: 1112 KKLDMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNG 1291
K +M+ E DL S YLKA +KE LR S A+C ++GY IP+ RV++N
Sbjct: 62 KGKEMVTEADLDSXAYLKAVIKETLRLHMPGPLLVPHLSMAECNVNGYIIPSGIRVIINS 241
Query: 1292 WAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATME 1471
WA+ RDP WE +EFMPERFM G + Y G DF YLPFG+GRRICPG NFA+AT+E
Sbjct: 242 WALARDPGSWEHADEFMPERFMECGSAATMDYKGNDFSYLPFGTGRRICPGINFAIATIE 421
Query: 1472 IMLANLMYHFDWEVPNEKEDGG 1537
IMLANL+YHF+W++P E + G
Sbjct: 422 IMLANLIYHFNWKLPTELMEDG 487
Score = 129 bits (276), Expect(2) = 1e-029
Identities = 65/127 (51%), Positives = 76/127 (59%)
Frame = -1 / -2
Query: 1536 PPSSFSLGTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSR 1357
P S S+G+ Q KWYMR ASMISMVA AKL PGQI RP PNG+Y KS+PL* + + P
Sbjct: 486 PSSINSVGSFQLKWYMRFASMISMVAIAKLIPGQILRPVPNGKYEKSFPL*SIVAALPHS 307
Query: 1356 MNLSGMNSSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSAS 1177
+N SGMNSS SQ GSL AQ TR+ G+ YP SA+E S S
Sbjct: 306 INRSGMNSSACSQLPGSLARAQLLMMTRIPDGIMYPFTLHSAMERWGTRSGPGIWSLSVS 127
Query: 1176 FMDAFRY 1156
+ AFRY
Sbjct: 126 LITAFRY 106
Score = 24.4 bits (47), Expect(2) = 3e-048
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2 / +2
Query: 1049 LMNHRRVMKKLQAEVRA 1099
LM + +M KLQAEVR+
Sbjct: 2 LMQNPHLMNKLQAEVRS 52
Score = 22.1 bits (42), Expect(2) = 1e-029
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3 / -1
Query: 1096 PYLRLQLLHDAPVVHE 1049
P+L L L+H+ V+HE
Sbjct: 49 PHLGL*LVHEVGVLHE 2
>gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 5', mRNA sequence
Length = 533
Score = 184 bits (396), Expect(2) = 2e-047
Identities = 74/133 (55%), Positives = 89/133 (66%)
Frame = +2 / +1
Query: 1112 KKLDMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNG 1291
K D + +DDL LPYLKA +KE LR S +C I+GY IP+ TR +N
Sbjct: 133 KGKDTVTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINT 312
Query: 1292 WAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATME 1471
+AI RDP+ WE PEEFMPERFM G + Y G DF+Y PFGSGRRICPG NFA AT++
Sbjct: 313 YAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGRRICPGINFATATIQ 492
Query: 1472 IMLANLMYHFDWE 1510
+ML NLMYHFDW+
Sbjct: 493 LMLTNLMYHFDWK 531
Score = 111 bits (237), Expect(2) = 2e-029
Identities = 58/118 (49%), Positives = 69/118 (58%)
Frame = -1 / -1
Query: 1506 QSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMNSSG 1327
QSKWYMR SM MVA AKL PG I RPDPNG+Y KS+PL* + + P MN SGMNSSG
Sbjct: 527 QSKWYMRFVSMS*MVAVAKLIPGHILRPDPNGKYWKSFPL*SMAAALPPSMNRSGMNSSG 348
Query: 1326 FSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRYG 1153
SQ GSL +A + RV G+ P + S++E S S + AFR G
Sbjct: 347 LSQLLGSLWIA*VLMKVRVPDGIV*PFMMHSSMERWGTMSGPGM*SRSVSLITAFR*G 174
Score = 39.1 bits (79), Expect(2) = 2e-029
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = -1 / -1
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSMAASN 994
TSACS MTR + +S MA SST +VS+ ASN
Sbjct: 116 TSACSMAMTRGFCISRTMAYSSTMVDVSVPASN 18
Score = 26.7 bits (52), Expect(2) = 2e-047
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1 / +3
Query: 1006 HRDLISGAGVRHGRAHEPQARHEEAASGG 1092
H + G+RHG A RH A S G
Sbjct: 30 HGHINHSTGIRHGSADAEPPRHGHATSRG 116
>gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak40p23 5', mRNA sequence
Length = 502
Score = 188 bits (404), Expect = 1e-046
Identities = 75/142 (52%), Positives = 94/142 (66%)
Frame = +2 / +1
Query: 1112 KKLDMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNG 1291
K +M+ E DL SL YLKA +KE LR S A+C ++GY IP+ RV++N
Sbjct: 19 KGKEMVTEADLDSLAYLKAXIKETLRLHMPGPLLVPHLSMAECNVNGYIIPSGIRVIINS 198
Query: 1292 WAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATME 1471
WA+ RDP WE EFMPER M G + Y G DF YLPFG+GRRICPG NFA+AT+E
Sbjct: 199 WALARDPGSWEHAXEFMPERXMECGSAATMDYKGNDFSYLPFGTGRRICPGINFAIATIE 378
Query: 1472 IMLANLMYHFDWEVPNEKEDGG 1537
IMLANL+YHF+W++P E + G
Sbjct: 379 IMLANLIYHFNWKLPTELMEDG 444
Score = 124 bits (265), Expect = 2e-027
Identities = 63/127 (49%), Positives = 74/127 (58%)
Frame = -1 / -3
Query: 1536 PPSSFSLGTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSR 1357
P S S+G+ Q KWYMR ASMISMVA AKL PGQI RP PNG+Y KS+PL* + + P
Sbjct: 443 PSSINSVGSFQLKWYMRFASMISMVAIAKLIPGQILRPVPNGKYEKSFPL*SIVAALPHS 264
Query: 1356 MNLSGMNSSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSAS 1177
+ SGMNS SQ GSL AQ TR+ G+ YP SA+E S S
Sbjct: 263 IXRSGMNSXACSQLPGSLARAQLLMMTRIPDGIMYPFTLHSAMERWGTRSGPGIWSLSVS 84
Query: 1176 FMDAFRY 1156
+ AFRY
Sbjct: 83 LIXAFRY 63
>gb|AV934098.1|AV934098 AV934098 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 5', mRNA sequence
Length = 638
Score = 86.3 bits (182), Expect(4) = 1e-046
Identities = 34/70 (48%), Positives = 47/70 (67%)
Frame = +2 / +3
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 333 EIISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 512
Query: 1301 GRDPAVWEKP 1330
GRDP+ WE P
Sbjct: 513 GRDPSSWEYP 542
Score = 74.4 bits (156), Expect(4) = 1e-046
Identities = 33/66 (50%), Positives = 46/66 (69%)
Frame = +2 / +3
Query: 899 EKESDDFIDIFLSRYEEYGFTMDNVKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKK 1078
+ + DDF+DI LS +EY T +++K+LL +VF AI+TS VLE +AELM +M+K
Sbjct: 114 DHKDDDFVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEK 293
Query: 1079 LQAEVR 1096
LQ EVR
Sbjct: 294 LQDEVR 311
Score = 56.1 bits (116), Expect(3) = 1e-021
Identities = 28/58 (48%), Positives = 31/58 (53%)
Frame = -1 / -2
Query: 1329 GFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
G+SQ GSLPMA T TRV AG YPS+ QSA+ S SFM A RY
Sbjct: 541 GYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGCSRSDSFMTALRY 368
Score = 43.2 bits (88), Expect(3) = 1e-021
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = -1 / -1
Query: 1425 PDPNGRYLKSWPL*LLDLSQPSRMNLSGMNSS 1330
P PNG+ KS+PL L+ + PS +NLSGMNSS
Sbjct: 638 PAPNGKN*KSFPLKLICIVLPSSVNLSGMNSS 543
Score = 42.8 bits (87), Expect(3) = 1e-021
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = -1 / -2
Query: 1092 TSACSFFMTRLWFMSSAMADSSTRYEVSMAASNTFMRRDLTLSMVKPYSSYLE 934
TS+CSF + MSSA +S T +VS+A T +RR S+V+ YS + +
Sbjct: 307 TSSCSFSIMCGLLMSSAKVNSRTLADVSIAPKKTSVRRAFMCSLVRAYSCWTD 149
Score = 42.3 bits (86), Expect(4) = 1e-046
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2 / +1
Query: 1331 EEFMPERFMRDGWDKSNSYSGQDFRYLPFGS 1423
EEF+PERF +G ++ G DF++LPFG+
Sbjct: 544 EEFIPERFTDEGSTMHINFKGNDFQFLPFGA 636
Score = 41.4 bits (84), Expect(4) = 1e-046
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2 / +3
Query: 788 LFRLVCWKVTRHLKRWDSLLEEVIHEHVEMRKLSGDKEKE 907
L + VC K R RW LL++VI HV RKL+ D + +
Sbjct: 9 LXKAVCAKAKRVRNRWADLLDQVIDNHVSKRKLASDHKDD 128
>gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P450 monooxygenase
CYP71U4v2 mRNA, complete cds
Length = 1578
Score = 74.4 bits (156), Expect(4) = 5e-046
Identities = 34/102 (33%), Positives = 60/102 (58%)
Frame = +2 / +1
Query: 293 LFLRAGAVPTLIVSSPSAAEAVMRTHDHIFASRPWSMASHILRYNTCDVAFSPLGEYWQQ 472
+ LR G VP +IVS+P AA V++T+D FA+R ++ + + F+P GE+W+Q
Sbjct: 211 MLLRLGEVPNVIVSTPEAAMLVLKTNDLTFATRTSGPTLDVVGSASEGIIFAPYGEHWRQ 390
Query: 473 TRKLMNTHLLSNKKVYSFRHGREEEVCLVVDNLREAAAKSPS 598
RK+ LLS +V + + E+ +++++ A++ SPS
Sbjct: 391 MRKVCVVELLSAMQVRRIQSIMQAEIAHLLESVAAASSASPS 516
Score = 72.1 bits (151), Expect(4) = 5e-046
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +2 / +1
Query: 1382 SYSGQDFRYLPFGSGRRICPGANFALATMEIMLANLMYHFDWEVP 1516
S G ++PFG+GRR CPGA FA +E++LANL+YHFDW +P
Sbjct: 1312 SSQGPHMEFVPFGAGRRQCPGALFATTMLELVLANLLYHFDWAIP 1446
Score = 59.3 bits (123), Expect(4) = 5e-046
Identities = 27/80 (33%), Positives = 46/80 (57%)
Frame = +2 / +1
Query: 950 YGFTMDNVKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKKLQAEVRAYGAEKKLDMI 1129
+ T + + +++ ++F AA +T+ LE AMAEL+ + R M + + EVR ++ I
Sbjct: 886 FPLTSEIISAVIFDIFSAATDTTAATLEWAMAELVRNPRAMARAKLEVRQMLRHRRSSTI 1065
Query: 1130 REDDLSSLPYLKASMKEALR 1189
DL+ L YL+ +KE LR
Sbjct: 1066 TSADLAGLHYLRMVIKETLR 1125
Score = 47.8 bits (98), Expect(4) = 5e-046
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2 / +1
Query: 1226 STADCQIDGYHIPANTRVLVNGWAIGRDPAVW 1321
S +C++ GY IP T V++N +A+GRDPA W
Sbjct: 1159 SQENCRVMGYDIPKGTAVMINAFAVGRDPAHW 1254
>gb|AV915851.1|AV915851 AV915851 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16e06 5', mRNA sequence
Length = 698
Score = 91.8 bits (194), Expect(3) = 9e-046
Identities = 38/95 (40%), Positives = 58/95 (61%)
Frame = +2 / +1
Query: 584 AKSPSTAVDMSEVLAAYTNDVVSRSVLGSTHRKKGRNTLFREMTMTNVDLLVGFNLEYYI 763
A + A+D+ E+L+A++ ++V +V G + R+KG LFRE+ TN L+ GFN+ Y
Sbjct: 148 AMAAGAALDLGELLSAFSTNIVGHAVCGKSFRQKGHEKLFRELVETNSLLIGGFNVGDYF 327
Query: 764 PRWPLTDLLFRLVCWKVTRHLKRWDSLLEEVIHEH 868
P D++ +VC + R K WD LLE +IHEH
Sbjct: 328 PELLKLDIIRWMVCGRARRVNKMWDDLLESLIHEH 432
Score = 73.0 bits (153), Expect(3) = 9e-046
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = +2 / +1
Query: 434 DVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEVCLVVDNLREAAA 586
D+AF P G++W+Q +K+ THLL+ KV S+R REEE CLVV LR+A A
Sbjct: 4 DIAFCPYGDHWRQVKKIAMTHLLTANKVRSYRQAREEEACLVVAKLRDAMA 156
Score = 58.8 bits (122), Expect(3) = 9e-046
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +2 / +1
Query: 905 ESDDFIDIFLSRYEEYGFTMDNVKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKKLQ 1084
+ D+I LS +EY T + VK+ L+ +F A +TSY+V+E AMA LM + +M KLQ
Sbjct: 460 DDTDYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIVMEYAMARLMQNPDLMTKLQ 639
Query: 1085 A 1087
A
Sbjct: 640 A 642
Score = 53.8 bits (111), Expect(3) = 6e-021
Identities = 30/78 (38%), Positives = 41/78 (52%)
Frame = -3 / -3
Query: 868 VFVDHLLQQGVPALEVARDLPAHEPEEQVRQRPPRDVVLQVEPHQEVHVGHGHLPEQRVP 689
+F+D +Q VP L + A+ P + V+ + R+VV VE E VG LPE+ +
Sbjct: 432 MFMDEAFEQVVPHLVHSPGPAANHPPDDVQLQQLREVVPHVEAANEQGVGLHQLPEELLV 253
Query: 688 AFLPVRRAQHRPAHHVVG 635
AFLP A H AH V G
Sbjct: 252 AFLPEGLAAHGVAHDVGG 199
Score = 44.1 bits (90), Expect(3) = 6e-021
Identities = 24/56 (42%), Positives = 31/56 (55%)
Frame = -1 / -1
Query: 1101 YARTSACSFFMTRLWFMSSAMADSSTRYEVSMAASNTFMRRDLTLSMVKPYSSYLE 934
Y+ ACS M + MS AMA S T Y+VS+ A N LT S+V+ YS +E
Sbjct: 656 YSSPRACSLVMRSGFCMSRAMAYSITMYDVSVPAPNMITN*ALTCSLVRLYSF*IE 489
Score = 41.4 bits (84), Expect(3) = 6e-021
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -1 / -1
Query: 531 WRKE*TFLLLSRCVFISFLVCCQYSPSGEKATS 433
WR E T L + RCV F C Q+SP G+KA S
Sbjct: 101 WR*ERTLLAVRRCVMAIFFTCLQWSP*GQKAMS 3
>gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38d04 3', mRNA sequence
Length = 552
Score = 171 bits (368), Expect(2) = 4e-045
Identities = 65/124 (52%), Positives = 87/124 (70%)
Frame = +2 / -1
Query: 1145 SSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAIGRDPAVWE 1324
+++ YL+ +KE+LR ADC IDGY +PA TRV+VN WAIGRDP+ WE
Sbjct: 552 NNMXYLRXVIKESLRLHPVAPLLAPHLXMADCIIDGYIVPAGTRVVVNAWAIGRDPSSWE 373
Query: 1325 KPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIMLANLMYHFD 1504
PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N +A +E+MLANL+ HFD
Sbjct: 372 YPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFD 193
Query: 1505 WEVP 1516
WE+P
Sbjct: 192 WELP 181
Score = 126 bits (270), Expect = 4e-028
Identities = 60/120 (50%), Positives = 73/120 (60%)
Frame = -1 / +2
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G+SQSKW+ R A++ S A + PG I RP PNG+ KS+PL L+ + PS +NLSGMN
Sbjct: 182 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 361
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
SSG+SQ GSLPMA T TRV AG YPS+ QSA+ S SFM RY
Sbjct: 362 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMXRCGARRGATGCSRSDSFMTXLRY 541
Score = 31.8 bits (63), Expect(2) = 4e-045
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2 / -1
Query: 1532 GGGKVSMDETFGLMLRRNEPLYLVPR 1609
G + M E FGL +RR E L LVP+
Sbjct: 171 GRKDIDMTEVFGLTVRRKEKLLLVPK 94
>gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak42e08 3', mRNA sequence
Length = 594
Score = 182 bits (392), Expect = 5e-045
Identities = 69/132 (52%), Positives = 95/132 (71%)
Frame = +2 / -1
Query: 1121 DMIREDDLSSLPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAI 1300
++I E D++++ YL+A +KE+LR + ADC IDGY +PA TRV+VN WAI
Sbjct: 519 EIISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAI 340
Query: 1301 GRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIML 1480
GRDP+ WE PEEF+PERF +G ++ G DF++LPFG+GRR+CPG N +A +E+ML
Sbjct: 339 GRDPSSWEYPEEFIPERFTDEGSTMHINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 160
Query: 1481 ANLMYHFDWEVP 1516
ANL+ HFDWE+P
Sbjct: 159 ANLVCHFDWELP 124
Score = 128 bits (275), Expect = 7e-029
Identities = 61/120 (50%), Positives = 74/120 (61%)
Frame = -1 / +2
Query: 1515 GTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSRMNLSGMN 1336
G+SQSKW+ R A++ S A + PG I RP PNG+ KS+PL L+ + PS +NLSGMN
Sbjct: 125 GSSQSKWHTRFANISSTFAIPRFIPGHILRPAPNGKN*KSFPLKLICIVLPSSVNLSGMN 304
Query: 1335 SSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSASFMDAFRY 1156
SSG+SQ GSLPMA T TRV AG YPS+ QSA+ S SFM A RY
Sbjct: 305 SSGYSQELGSLPMAHALTTTRVPAGTMYPSMMQSAMARCGARRGATGRSRSDSFMTALRY 484
>gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36o23 5', mRNA sequence
Length = 664
Score = 173 bits (372), Expect(2) = 7e-045
Identities = 71/129 (55%), Positives = 87/129 (67%)
Frame = +2 / +3
Query: 1151 LPYLKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAIGRDPAVWEKP 1330
L YLKA +KE LR + ADC I+GY IP+ TRV+VN AI RDP+ WE
Sbjct: 33 LAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESA 212
Query: 1331 EEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIMLANLMYHFDWE 1510
EEF+PERFM+ G + Y G F YLPFG+GRRICPG NFA+A +EIMLANL+YHFDW+
Sbjct: 213 EEFLPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWK 392
Query: 1511 VPNEKEDGG 1537
+P + G
Sbjct: 393 LPPGSAERG 419
Score = 110 bits (235), Expect = 2e-023
Identities = 61/126 (48%), Positives = 70/126 (55%)
Frame = -1 / -1
Query: 1536 PPSSFSLGTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSR 1357
P S+ G+ QSKWY RLASMISM A AK PG I RP PNGR K +PL* + + P
Sbjct: 418 PRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL*SMAAALPPC 239
Query: 1356 MNLSGMNSSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSAS 1177
M SG NSS SQ GSL +A+ T TRV GM P + QSA+ S S
Sbjct: 238 MKRSGRNSSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVS 59
Query: 1176 FMDAFR 1159
M AFR
Sbjct: 58 LMTAFR 41
Score = 29.0 bits (57), Expect(2) = 7e-045
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2 / +3
Query: 1544 VSMDETFGLMLRRNEPLYLVP 1606
+SM E+FGL + R + L LVP
Sbjct: 420 ISMTESFGLTVHRKDKLLLVP 482
>emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for putative cytochrome P450
Length = 1790
Score = 72.5 bits (152), Expect(4) = 9e-045
Identities = 33/101 (32%), Positives = 59/101 (58%)
Frame = +2 / +2
Query: 293 LFLRAGAVPTLIVSSPSAAEAVMRTHDHIFASRPWSMASHILRYNTCDVAFSPLGEYWQQ 472
+ LR G VP +IVS+P AA V++T+D FA+R ++ + + F+P GE+W+Q
Sbjct: 275 MLLRLGEVPNVIVSTPEAAVLVLKTNDLTFATRTSGPTLDVVGSASEGIIFAPYGEHWRQ 454
Query: 473 TRKLMNTHLLSNKKVYSFRHGREEEVCLVVDNLREAAAKSP 595
RK+ LLS +V + + E+ +++++ A++ SP
Sbjct: 455 MRKVCVVELLSAMQVRRIQSIMQAEIAHLLESVAAASSASP 577
Score = 72.1 bits (151), Expect(4) = 9e-045
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +2 / +2
Query: 1382 SYSGQDFRYLPFGSGRRICPGANFALATMEIMLANLMYHFDWEVP 1516
S G ++PFG+GRR CPGA FA +E++LANL+YHFDW +P
Sbjct: 1376 SSQGPHMEFVPFGAGRRQCPGALFATTMLELVLANLLYHFDWAIP 1510
Score = 57.4 bits (119), Expect(4) = 9e-045
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +2 / +2
Query: 950 YGFTMDNVKSLLMNVFEAAIETSYLVLESAMAELMNHRRVMKKLQAEVRAYGAEKKLDMI 1129
+ T + + +++ ++F AA +T+ LE AMAEL+ + + M + + EVR ++ I
Sbjct: 950 FXLTSEIISAVIFDIFSAATDTTAATLEWAMAELVXNPQAMARAKLEVRQMLRHRRSSTI 1129
Query: 1130 REDDLSSLPYLKASMKEALR 1189
DL+ L YL+ +KE LR
Sbjct: 1130 TSADLAGLHYLRMVIKETLR 1189
Score = 47.8 bits (98), Expect(4) = 9e-045
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2 / +2
Query: 1226 STADCQIDGYHIPANTRVLVNGWAIGRDPAVW 1321
S +C++ GY IP T V++N +A+GRDPA W
Sbjct: 1223 SQENCRVMGYDIPKGTAVMINAFAVGRDPAHW 1318
>gb|AV932347.1|AV932347 AV932347 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3e02 5', mRNA sequence
Length = 606
Score = 142 bits (305), Expect(2) = 1e-044
Identities = 57/98 (58%), Positives = 73/98 (74%)
Frame = +2 / +1
Query: 293 LFLRAGAVPTLIVSSPSAAEAVMRTHDHIFASRPWSMASHILRYNTCDVAFSPLGEYWQQ 472
+ LR GAVP L+VSS AAEAV+RTHDH+FASRP S+ S + Y +CD+ F+P GEYW+Q
Sbjct: 100 MLLRLGAVPNLVVSSSHAAEAVLRTHDHVFASRPHSVVSDTIMYGSCDIGFAPYGEYWRQ 279
Query: 473 TRKLMNTHLLSNKKVYSFRHGREEEVCLVVDNLREAAA 586
+KL+ TH+LS KKV SFR EE+ +VV + EAAA
Sbjct: 280 AKKLVTTHMLSVKKV*SFRSAAAEEISIVVAKINEAAA 393
Score = 58.8 bits (122), Expect(2) = 1e-044
Identities = 28/67 (41%), Positives = 37/67 (55%)
Frame = +2 / +1
Query: 605 VDMSEVLAAYTNDVVSRSVLGSTHRKKGRNTLFREMTMTNVDLLVGFNLEYYIPRWPLTD 784
VDMSE+L + ND+ R V G + GR+ LFRE+ LL GF+LE Y P
Sbjct: 406 VDMSELLHTFANDMACRIVSGKFFLRDGRSKLFRELIKDTSRLLGGFSLEEYFPALGRVG 585
Query: 785 LLFRLVC 805
+L + VC
Sbjct: 586 VLKKAVC 606
>gb|CA017939.1|CA017939 HV06O02r HV Hordeum vulgare subsp. vulgare cDNA clone HV06O02
5-PRIME, mRNA sequence
Length = 500
Score = 139 bits (298), Expect(2) = 2e-044
Identities = 53/93 (56%), Positives = 74/93 (79%)
Frame = +2 / +2
Query: 302 RAGAVPTLIVSSPSAAEAVMRTHDHIFASRPWSMASHILRYNTCDVAFSPLGEYWQQTRK 481
R GAVPTL+VS+P+AA+AV+RTHDH+FASRP S +HIL Y + DV F+P G +W+Q +K
Sbjct: 8 RLGAVPTLVVSTPAAAQAVLRTHDHVFASRPHSPVAHILFYGSADVVFAPYGHHWRQVKK 187
Query: 482 LMNTHLLSNKKVYSFRHGREEEVCLVVDNLREA 580
+ THLL+ +KV+S+RH R+ EV LV+ +R+A
Sbjct: 188 ISTTHLLTARKVHSYRHARQHEVNLVLAKVRDA 286
Score = 61.6 bits (128), Expect(2) = 2e-044
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = +2 / +2
Query: 584 AKSPSTAVDMSEVLAAYTNDVVSRSVLGSTHRKKGRNTLFREMTMTNVDLLVGFNLEYYI 763
A A+DMSE+L A+ D+V +V G++ R++G N FRE+ N L+ GFNLE +
Sbjct: 284 AMRAGVALDMSELLNAFVFDIVCHAVAGNSFRERGLNKHFRELVEANASLIGGFNLEDHF 463
Query: 764 P 766
P
Sbjct: 464 P 466
>gb|CA018489.1|CA018489 HV08M10r HV Hordeum vulgare subsp. vulgare cDNA clone HV08M10
5-PRIME, mRNA sequence
Length = 550
Score = 179 bits (386), Expect = 4e-044
Identities = 69/110 (62%), Positives = 88/110 (80%)
Frame = +2 / +1
Query: 209 IVGHLHHIGPQTHISLQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHIFAS 388
++GHLH +G HISL++L K+G +G + LR GAVPTL+VSSPSAA+AV+RTHDH+FAS
Sbjct: 220 VIGHLHLVGSLPHISLRDLATKHGRDGLMLLRLGAVPTLVVSSPSAAQAVLRTHDHVFAS 399
Query: 389 RPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGR 538
RP+S+ S IL Y DVAFSP GE+W+Q RK+ THLL+NKKV S+RH R
Sbjct: 400 RPYSLVSEILFYGPSDVAFSPYGEHWRQVRKIATTHLLTNKKVRSYRHAR 549
Score = 119 bits (255), Expect = 4e-026
Identities = 59/106 (55%), Positives = 66/106 (62%)
Frame = -1 / -3
Query: 531 WRKE*TFLLLSRCVFISFLVCCQYSPSGEKATSQVL*RRMWEAMDHGRDAKMWSWVRITA 352
WR E TFLL+ RCV FL C Q SP G KATS+ *+R+ + GRDAK WS VR TA
Sbjct: 542 WR*ERTFLLVRRCVVAIFLTCRQCSP*GLKATSEGP*KRISLTRE*GRDAKTWSCVRSTA 363
Query: 351 SAALGDDTIRVGTAPARRNRNPLCPYLATSSWSEMWVWGPMWCRCP 214
AALGDDT VGTAP+RR+ P P L S EM P CRCP
Sbjct: 362 CAALGDDTTSVGTAPSRRSMRPSRPCLVARSRREMCGREPTRCRCP 225
>gb|AV934261.1|AV934261 AV934261 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11k15 5', mRNA sequence
Length = 598
Score = 142 bits (305), Expect(2) = 2e-043
Identities = 57/98 (58%), Positives = 73/98 (74%)
Frame = +2 / +1
Query: 293 LFLRAGAVPTLIVSSPSAAEAVMRTHDHIFASRPWSMASHILRYNTCDVAFSPLGEYWQQ 472
+ LR GAVP L+VSS AAEAV+RTHDH+FASRP S+ S + Y +CD+ F+P GEYW+Q
Sbjct: 100 MLLRLGAVPNLVVSSSHAAEAVLRTHDHVFASRPHSVVSDTIMYGSCDIGFAPYGEYWRQ 279
Query: 473 TRKLMNTHLLSNKKVYSFRHGREEEVCLVVDNLREAAA 586
+KL+ TH+LS KKV SFR EE+ +VV + EAAA
Sbjct: 280 AKKLVTTHMLSVKKV*SFRSAAAEEISIVVAKINEAAA 393
Score = 55.1 bits (114), Expect(2) = 2e-043
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = +2 / +1
Query: 605 VDMSEVLAAYTNDVVSRSVLGSTHRKKGRNTLFREMTMTNVDLLVGFNLEYYIP 766
VDMSE+L + ND+ R V G + GR+ LFRE+ LL GF+LE Y P
Sbjct: 406 VDMSELLHTFANDMACRIVSGKFFLRDGRSKLFRELIKDTSRLLGGFSLEEYFP 567
>gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd1h15 3', mRNA sequence
Length = 586
Score = 168 bits (362), Expect(2) = 2e-043
Identities = 69/126 (54%), Positives = 85/126 (67%)
Frame = +2 / -3
Query: 1160 LKASMKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAIGRDPAVWEKPEEF 1339
LKA +KE LR + ADC I+GY IP+ TRV+VN AI RDP+ WE EEF
Sbjct: 584 LKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEF 405
Query: 1340 MPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIMLANLMYHFDWEVPN 1519
+PERFM+ G + Y G F YLPFG+GRRICPG NFA+A +EIMLANL+YHFDW++P
Sbjct: 404 LPERFMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPP 225
Query: 1520 EKEDGG 1537
+ G
Sbjct: 224 GSAERG 207
Score = 110 bits (235), Expect = 2e-023
Identities = 61/126 (48%), Positives = 70/126 (55%)
Frame = -1 / +1
Query: 1536 PPSSFSLGTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSR 1357
P S+ G+ QSKWY RLASMISM A AK PG I RP PNGR K +PL* + + P
Sbjct: 208 PRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL*SMAAALPPC 387
Query: 1356 MNLSGMNSSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAVEXXXXXXXXXXXXXSAS 1177
M SG NSS SQ GSL +A+ T TRV GM P + QSA+ S S
Sbjct: 388 MKRSGRNSSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAMARWGTRSGAGM*SRSVS 567
Query: 1176 FMDAFR 1159
M AFR
Sbjct: 568 LMTAFR 585
Score = 29.0 bits (57), Expect(2) = 2e-043
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2 / -3
Query: 1544 VSMDETFGLMLRRNEPLYLVP 1606
+SM E+FGL + R + L LVP
Sbjct: 206 ISMTESFGLTVHRKDKLLLVP 144
>gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16e06 3', mRNA sequence
Length = 594
Score = 163 bits (351), Expect(2) = 5e-042
Identities = 66/122 (54%), Positives = 82/122 (67%)
Frame = +2 / -2
Query: 1172 MKEALRXXXXXXXXXXXYSTADCQIDGYHIPANTRVLVNGWAIGRDPAVWEKPEEFMPER 1351
+KE LR + ADC I+GY IP+ TRV+VN AI RDP+ WE EEF+PER
Sbjct: 590 IKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPER 411
Query: 1352 FMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFALATMEIMLANLMYHFDWEVPNEKED 1531
FM+ G + Y G F YLPFG+GRRICPG NFA+A +EIMLANL+YHFDW++P +
Sbjct: 410 FMQGGSAAAMDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPGSAE 231
Query: 1532 GG 1537
G
Sbjct: 230 RG 225
Score = 106 bits (226), Expect = 4e-022
Identities = 55/103 (53%), Positives = 64/103 (62%)
Frame = -1 / +1
Query: 1536 PPSSFSLGTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSR 1357
P S+ G+ QSKWY RLASMISM A AK PG I RP PNGR K +PL* + + P
Sbjct: 226 PRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL*SMAAALPPC 405
Query: 1356 MNLSGMNSSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAV 1228
M SG NSS SQ GSL +A+ T TRV GM P + QSA+
Sbjct: 406 MKRSGRNSSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAM 534
Score = 29.0 bits (57), Expect(2) = 5e-042
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2 / -2
Query: 1544 VSMDETFGLMLRRNEPLYLVP 1606
+SM E+FGL + R + L LVP
Sbjct: 224 ISMTESFGLTVHRKDKLLLVP 162
>gb|AV921548.1|AV921548 AV921548 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m23 3', mRNA sequence
Length = 560
Score = 160 bits (345), Expect(2) = 9e-042
Identities = 60/96 (62%), Positives = 72/96 (75%)
Frame = +2 / -3
Query: 1250 GYHIPANTRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGR 1429
GY IP+ TR +N +AI RDP+ WE PEEFMPERFM G + Y G DF+Y PFGSGR
Sbjct: 477 GYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGR 298
Query: 1430 RICPGANFALATMEIMLANLMYHFDWEVPNEKEDGG 1537
RICPG NFA AT+++ML NLMYHFDW++P E E+ G
Sbjct: 297 RICPGINFATATIQLMLTNLMYHFDWKLPPESEEEG 190
Score = 114 bits (244), Expect = 1e-024
Identities = 58/112 (51%), Positives = 70/112 (62%)
Frame = -1 / +2
Query: 1593 SGSFLRSISPNVSSMLTFPPPSSFSLGTSQSKWYMRLASMISMVASAKLAPGQIRRPDPN 1414
S SF + + + + F P SS S G+ QSKWYMR SM MVA AKL PG I RPDPN
Sbjct: 134 SRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPN 313
Query: 1413 GRYLKSWPL*LLDLSQPSRMNLSGMNSSGFSQTAGSLPMAQPFTRTRVLAGM 1258
G+Y KS+PL* + + P MN SGMNSSG SQ GSL +A + RV G+
Sbjct: 314 GKYWKSFPL*SMAAALPPSMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGI 469
Score = 30.9 bits (61), Expect(2) = 9e-042
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2 / -3
Query: 1544 VSMDETFGLMLRRNEPLYLVP 1606
++M ETFGL + R E L LVP
Sbjct: 189 INMTETFGLTVHRKEKLLLVP 127
>gb|CA015705.1|CA015705 HV12J09u HV Hordeum vulgare subsp. vulgare cDNA clone HV12J09
3-PRIME, mRNA sequence
Length = 518
Score = 160 bits (345), Expect(2) = 9e-042
Identities = 60/96 (62%), Positives = 72/96 (75%)
Frame = +2 / -3
Query: 1250 GYHIPANTRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGR 1429
GY IP+ TR +N +AI RDP+ WE PEEFMPERFM G + Y G DF+Y PFGSGR
Sbjct: 516 GYTIPSGTRTFINTYAIQRDPSNWESPEEFMPERFMEGGSAAAMDYKGNDFQYFPFGSGR 337
Query: 1430 RICPGANFALATMEIMLANLMYHFDWEVPNEKEDGG 1537
RICPG NFA AT+++ML NLMYHFDW++P E E+ G
Sbjct: 336 RICPGINFATATIQLMLTNLMYHFDWKLPPESEEEG 229
Score = 113 bits (242), Expect = 3e-024
Identities = 58/112 (51%), Positives = 70/112 (62%)
Frame = -1 / +2
Query: 1593 SGSFLRSISPNVSSMLTFPPPSSFSLGTSQSKWYMRLASMISMVASAKLAPGQIRRPDPN 1414
S SF + + + + F P SS S G+ QSKWYMR SM MVA AKL PG I RPDPN
Sbjct: 173 SRSFSLRCTVSPNVSVIFMPSSSDSGGSFQSKWYMRFVSMS*MVAVAKLIPGHILRPDPN 352
Query: 1413 GRYLKSWPL*LLDLSQPSRMNLSGMNSSGFSQTAGSLPMAQPFTRTRVLAGM 1258
G+Y KS+PL* + + P MN SGMNSSG SQ GSL +A + RV G+
Sbjct: 353 GKY*KSFPL*SMAAALPPSMNRSGMNSSGLSQLLGSLWIA*VLMKVRVPDGI 508
Score = 30.9 bits (61), Expect(2) = 9e-042
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2 / -3
Query: 1544 VSMDETFGLMLRRNEPLYLVP 1606
++M ETFGL + R E L LVP
Sbjct: 228 INMTETFGLTVHRKEKLLLVP 166
>gb|AV913374.1|AV913374 AV913374 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21n09 5', mRNA sequence
Length = 522
Score = 160 bits (345), Expect(3) = 2e-041
Identities = 62/102 (60%), Positives = 76/102 (74%)
Frame = +2 / +1
Query: 1232 ADCQIDGYHIPANTRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYL 1411
ADC I+GY IP+ TRV+VN AI RDP+ WE EEF+PERFM+ G + Y G F YL
Sbjct: 64 ADCVINGYTIPSGTRVIVNSRAIARDPSSWESAEEFLPERFMQGGSAAAMDYKGNGFLYL 243
Query: 1412 PFGSGRRICPGANFALATMEIMLANLMYHFDWEVPNEKEDGG 1537
PFG+GRRICPG NFA+A +EIMLANL+YHFDW++P + G
Sbjct: 244 PFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPGSAERG 369
Score = 106 bits (226), Expect = 4e-022
Identities = 55/103 (53%), Positives = 64/103 (62%)
Frame = -1 / -2
Query: 1536 PPSSFSLGTSQSKWYMRLASMISMVASAKLAPGQIRRPDPNGRYLKSWPL*LLDLSQPSR 1357
P S+ G+ QSKWY RLASMISM A AK PG I RP PNGR K +PL* + + P
Sbjct: 368 PRSADPGGSFQSKWYTRLASMISMAAMAKFIPGHILRPVPNGR*RKPFPL*SMAAALPPC 189
Query: 1356 MNLSGMNSSGFSQTAGSLPMAQPFTRTRVLAGMWYPSIWQSAV 1228
M SG NSS SQ GSL +A+ T TRV GM P + QSA+
Sbjct: 188 MKRSGRNSSALSQLLGSLAIARLLTMTRVPDGMV*PFMTQSAM 60
Score = 29.0 bits (57), Expect(3) = 2e-041
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2 / +1
Query: 1544 VSMDETFGLMLRRNEPLYLVP 1606
+SM E+FGL + R + L LVP
Sbjct: 370 ISMTESFGLTVHRKDKLLLVP 432
Score = 24.0 bits (46), Expect(3) = 2e-041
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1 / +3
Query: 1003 SHRDLISGAGVRHGRAHEPQARH 1071
SH SGA RHGR + H
Sbjct: 24 SHACAASGAPSRHGRLRHKRLHH 92
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 782,872,834
Number of Sequences: 312970
Number of extensions: 14316381
Number of successful extensions: 250872
Number of sequences better than 1.0e-020: 207
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 23186089641
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)